BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048785
(280 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 125/307 (40%), Gaps = 40/307 (13%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKG---VARPILPRKFPYIPATDVAGEIIEV 58
V P P RK++ L+KV A+SLN D+K + G VA+ L P D +GE+IE+
Sbjct: 24 VDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKK-LKNNLPSGLGYDFSGEVIEL 82
Query: 59 GSEVKNFKAGYNVVAI------------------------LNHFSGGGLAEFAMVKESLT 94
GS+V N G V I L S L ++ LT
Sbjct: 83 GSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLS--FLQAASLPTAGLT 140
Query: 95 ASRPLEVSXXXXXXXXXXXXXXXXXXXQSAGLAKLGNSHVTATCGARNIEFVKSLGADEV 154
A + L + + LAK + V T RN F+K+LGA++
Sbjct: 141 ALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQC 200
Query: 155 LDYKTPDG-AALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDL-TPTPSAMLTFA 212
++Y D A+ +P DAVI G L E G ++ + T T ++ A
Sbjct: 201 INYHEEDFLLAISTP----VDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAGRVIEVA 256
Query: 213 WQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHA 272
QK ++ LL E L +L KL+ E K++ I LS+A A GH
Sbjct: 257 KQK----HRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHV 312
Query: 273 TGKIILE 279
GK++ +
Sbjct: 313 RGKLVFK 319
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 126/338 (37%), Gaps = 71/338 (21%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRK------------FPYIPAT 49
+H P +EV++KV A+S+N D ++ G L K FP
Sbjct: 47 IHYP------NEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGR 100
Query: 50 DVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVSXXXXXXX 109
DV+G ++E G +VK FK G V A + + G L+EF +V + + +P ++
Sbjct: 101 DVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASL 160
Query: 110 XXXXXXXXXXXXQSAGL--------------------------AKLGNSHVTATCGARNI 143
+ GL K ++HVTA C
Sbjct: 161 PYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDAS 220
Query: 144 EFVKSLGADEVLDYKT-----------PDGAALKSPSG----------RKYDAVIHCARG 182
E V+ LGAD+V+DYK+ P L + G +K+ +
Sbjct: 221 ELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLV 280
Query: 183 IPWSTFEPNLA-ENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKL 241
P+ L +G + S L W+ + + + G L + +L
Sbjct: 281 TPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWA-----FFMASGPCLDDIAEL 335
Query: 242 LKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279
+ GKI+ +I+ SK +A+ K GHA GK ++
Sbjct: 336 VDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 7 PTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFK 66
P P +VL+++EAS N D KI+ G A P + P I D+AG ++ VG EV +F+
Sbjct: 28 PQPAPGQVLVQIEASGTNPLDAKIRAGEA-PHAQQPLPAILGXDLAGTVVAVGPEVDSFR 86
Query: 67 AGYNVVAILNHFSG--GGLAEFAMVKESLTASRPLEVSXXXXXXXXXXXXXXXXXXXQSA 124
G V + G G A+FA V L AS+P ++ A
Sbjct: 87 VGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLVDRA 146
Query: 125 ----------------------GLAKLGNSHVTATCGARNIEFVKSLGADEVLDYKTPDG 162
+A + V AT ++E+V+ LGA + + P+
Sbjct: 147 QVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATPIDASREPED 206
Query: 163 AALKSPSGRKYDAV 176
A + +G+ +D V
Sbjct: 207 YAAEHTAGQGFDLV 220
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 126/325 (38%), Gaps = 52/325 (16%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
+PVP P EV ++++A++LN D ++KGVA P LP P++ D +G + VG V+
Sbjct: 20 LPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLP--LPHVLGADGSGVVDAVGPGVE 77
Query: 64 NFKAGYNVV------------------------AILNHFSGGGLAEFAMVKESLTASRPL 99
F G VV IL G AE+ ++ E+ A +P
Sbjct: 78 GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPK 137
Query: 100 EVSXXXXXXXXXXXXXXXXXXXQSAG----------------------LAKLGNSHVTAT 137
+S G +AKL + V AT
Sbjct: 138 NLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT 197
Query: 138 CGARN-IEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAE 194
G+ + + K+LGADE ++Y PD + G+ D V+ + + A
Sbjct: 198 AGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATAN 257
Query: 195 NGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSK 254
G++ + T + + + + ++ + K L +++ ++EGK+K ++
Sbjct: 258 GGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASK-SRLFPILRFVEEGKLKPVVGQV 316
Query: 255 HLLSKAEDAWAKGADGHATGKIILE 279
L A + + GK++L+
Sbjct: 317 LPLEAAAEGHRLLEERRVFGKVVLQ 341
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGV--ARPILPRKFPYIPATDVAGEIIEVGSE 61
+ VP P+ +VL+KV A +N + I+ G +P+LP Y P +DVAG I VG
Sbjct: 50 IAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLP----YTPGSDVAGVIEAVGDN 105
Query: 62 VKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRP 98
FK G V + GG AE+A+ + P
Sbjct: 106 ASAFKKGDRVFT--SSTISGGYAEYALAADHTVYKLP 140
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 85/224 (37%), Gaps = 46/224 (20%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN 64
P P +D+V ++VEA ++N D K++ A P + ++ TD AG ++ VGS+V +
Sbjct: 30 PCPMLPRDQVYVRVEAVAINPSDTKMRGQFATP-----WAFL-GTDYAGTVVAVGSDVTH 83
Query: 65 FKAGYNVVAILNHFS-----GGGLAEFAMVKESL------------TASRPLEVSXXXXX 107
+ G V N G +++ + + + A+ P +S
Sbjct: 84 IQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLA 143
Query: 108 XXXXXXXXXXXXXXQSAGLAK------LGNSHVT----------------ATCGARNIEF 145
Q +K G S T ATC N +
Sbjct: 144 MKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDL 203
Query: 146 VKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVIHCARGIPWSTF 188
KS GA+EV DY+ P+ A +++ + + C + +TF
Sbjct: 204 AKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTF 247
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 88/220 (40%), Gaps = 31/220 (14%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
V P+P + EVLLKV AS+LN D ++G P P I + +G + E+G +
Sbjct: 42 VAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASGHVAELGPGCQ 99
Query: 64 -NFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVSXXXXXXX------------X 110
++K G +A+L GGG A++ V E L P ++
Sbjct: 100 GHWKIGDTAMALL---PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHL 156
Query: 111 XXXXXXXXXXXQSAGLAKLGNS--HVTATCGA---------RNIEFVKSLGADEVLDYKT 159
AGL+ +G + +T GA + ++ + LGA +YK
Sbjct: 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKK 216
Query: 160 PD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGK 197
D A LK G + ++ C G W LA +G+
Sbjct: 217 EDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGR 256
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 89/217 (41%), Gaps = 31/217 (14%)
Query: 7 PTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK-NF 65
P+P + EVLLKV AS+LN D ++G P P I + +G + E+G + ++
Sbjct: 29 PSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASGHVAELGPGCQGHW 86
Query: 66 KAGYNVVAILNHFSGGGLAEFAMVKESLTASRP-----LEVSXXXXXXXXXXXXXXXXXX 120
K G +A+L GGG A++ V E L P + +
Sbjct: 87 KIGDTAMALL---PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGN 143
Query: 121 XQS-------AGLAKLGNS--HVTATCGA---------RNIEFVKSLGADEVLDYKTPD- 161
Q+ AGL+ +G + +T GA + ++ + LGA +YK D
Sbjct: 144 VQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDF 203
Query: 162 -GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGK 197
A LK G + ++ C G W LA +G+
Sbjct: 204 SEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGR 240
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 84/224 (37%), Gaps = 46/224 (20%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN 64
P P +D+V ++VEA ++N D ++ A P + ++ TD AG ++ VGS+V +
Sbjct: 30 PCPMLPRDQVYVRVEAVAINPSDTSMRGQFATP-----WAFL-GTDYAGTVVAVGSDVTH 83
Query: 65 FKAGYNVVAILNHFS-----GGGLAEFAMVKESL------------TASRPLEVSXXXXX 107
+ G V N G +++ + + + A+ P +S
Sbjct: 84 IQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLA 143
Query: 108 XXXXXXXXXXXXXXQSAGLAK------LGNSHVT----------------ATCGARNIEF 145
Q +K G S T ATC N +
Sbjct: 144 MKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDL 203
Query: 146 VKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVIHCARGIPWSTF 188
KS GA+EV DY+ P+ A +++ + + C + +TF
Sbjct: 204 AKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTF 247
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 32/213 (15%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN 64
P+P + EVL++ EA +N D ++G P P+ I +++GEI+ VG V
Sbjct: 49 PLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP--PKDASPILGLELSGEIVGVGPGVSG 106
Query: 65 FKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVSXXXXXXXXXXXXXXXXXXXQSA 124
+ G V + N GG AE+ ++ P Q A
Sbjct: 107 YAVGDKVCGLAN---GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXA 163
Query: 125 G----------------------LAKLGNSHVTATCGARN-IEFVKSLGADEVLDYKTPD 161
G LA+ + V AT G+ E + LGA ++Y++ D
Sbjct: 164 GLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSED 223
Query: 162 GAA-LKSPSGRKYDAVIHCARGIPWSTFEPNLA 193
AA +K+ +G+ D ++ I + FE N+A
Sbjct: 224 FAAVIKAETGQGVDIILDX---IGAAYFERNIA 253
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI-----LPRKFPYIPATDVAGEIIEV 58
+P+P P+ +VL+K+EA+ + D +++G + L K P ++AG I EV
Sbjct: 18 IPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEV 77
Query: 59 GSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRP 98
G EV + G ++VA+ N + G G + + E P
Sbjct: 78 GDEVVGYSKG-DLVAV-NPWEGEGNCYYCRIGEEHLCDSP 115
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEV 62
++ +P P+ E+L+K+++ S+N D K R + K P + D G + VG+EV
Sbjct: 24 NLDIPEPKVHEILVKIQSISVNPVDTK-----QRLMDVSKAPRVLGFDAIGVVESVGNEV 78
Query: 63 KNFKAGYNVVAILNHFSG-----GGLAEFAMVKESLTASRPLEVS 102
F G ++V ++SG G AE+ ++ E L A P +S
Sbjct: 79 TMFNQG-DIV----YYSGSPDQNGSNAEYQLINERLVAKAPKNIS 118
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 78/218 (35%), Gaps = 27/218 (12%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
PVP P ++L++ +NA D G P + K P+ + GE++ +G
Sbjct: 25 CPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSV--KPPFDIGFEGIGEVVALGLSAS 82
Query: 64 NFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPL--------------------EVSX 103
A Y V + + + G AE+ +V S+ P E+
Sbjct: 83 ---ARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGG 139
Query: 104 XXXXXXXXXXXXXXXXXXQSAGLAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKT-PD 161
+ L+K HV TC + F+KSLG D ++YKT P
Sbjct: 140 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPV 199
Query: 162 GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVI 199
G LK D V G + LA G++I
Sbjct: 200 GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLI 237
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 78/218 (35%), Gaps = 27/218 (12%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
PVP P ++L++ +NA D G P + K P+ + GE++ +G
Sbjct: 54 CPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSV--KPPFDIGFEGIGEVVALGLSAS 111
Query: 64 NFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPL--------------------EVSX 103
A Y V + + + G AE+ +V S+ P E+
Sbjct: 112 ---ARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGG 168
Query: 104 XXXXXXXXXXXXXXXXXXQSAGLAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKT-PD 161
+ L+K HV TC + F+KSLG D ++YKT P
Sbjct: 169 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPV 228
Query: 162 GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVI 199
G LK D V G + LA G++I
Sbjct: 229 GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLI 266
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 78/218 (35%), Gaps = 27/218 (12%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
PVP P ++L++ +NA D G P + K P+ + GE++ +G
Sbjct: 46 CPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSV--KPPFDIGFEGIGEVVALGLSAS 103
Query: 64 NFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPL--------------------EVSX 103
A Y V + + + G AE+ +V S+ P E+
Sbjct: 104 ---ARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGG 160
Query: 104 XXXXXXXXXXXXXXXXXXQSAGLAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKT-PD 161
+ L+K HV TC + F+KSLG D ++YKT P
Sbjct: 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPV 220
Query: 162 GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVI 199
G LK D V G + LA G++I
Sbjct: 221 GTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLI 258
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSE 61
+ +P P P ++L++V+A S+N D+K+++ K + D AG + VG +
Sbjct: 43 IELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK---VIGYDAAGIVSAVGPD 99
Query: 62 VKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRP 98
V F+ G V + G AEF +V E + +P
Sbjct: 100 VTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKP 136
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
V +P D++L++ +A +N DWK K A PI ++P D AG I++VG++V
Sbjct: 22 VDIPALAADDILVQNQAIGINPVDWKFIK--ANPI-NWSNGHVPGVDGAGVIVKVGAKVD 78
Query: 64 NFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVS 102
+ G V + G AEF ++ + P +S
Sbjct: 79 SKXLGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLS 117
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN 64
PVP+ ++E+L+K + + +N + +KG I P + PY+ + +G ++ G V N
Sbjct: 29 PVPSISEEELLIKNKYTGVNYIESYFRKG----IYPCEKPYVLGREASGTVVAKGKGVTN 84
Query: 65 FKAGYNVVAILN 76
F+ G V I N
Sbjct: 85 FEVGDQVAYISN 96
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSE 61
V V VP P EVL+KV A+S+ D I + K P I +VAGE++EVG
Sbjct: 20 VEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPG 79
Query: 62 VKNFKAGYNVVAILNHFSGG 81
V++ + G + +++ H G
Sbjct: 80 VEDLQVG-DYISVETHIVCG 98
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI-----LPRKFPYIPATDVAGEIIEV 58
+ VP P+ +VL+KVEA+ + D +++G + L K P ++AG+I EV
Sbjct: 18 IGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV 77
Query: 59 GSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRP 98
G EV + G ++VA+ N G G + + E P
Sbjct: 78 GDEVVGYSKG-DLVAV-NPLQGEGNCYYCRIGEEHLCDSP 115
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI-----LPRKFPYIPATDVAGEIIE 57
+ VP P+ +VL+KVEA+ + D +++G + L K P ++AG+I E
Sbjct: 17 EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE 76
Query: 58 VGSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRP 98
VG EV + G ++VA+ N + G G + + E P
Sbjct: 77 VGDEVVGYSKG-DLVAV-NPWQGEGNCYYCRIGEEHLCDSP 115
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI-----LPRKFPYIPATDVAGEIIE 57
+ VP P+ +VL+KVEA+ + D +++G + L K P ++AG+I E
Sbjct: 17 EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE 76
Query: 58 VGSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRP 98
VG EV + G ++VA+ N + G G + + E P
Sbjct: 77 VGDEVVGYSKG-DLVAV-NPWQGEGNCYYCRIGEEHLCDSP 115
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From
Pyrococcus Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From
Pyrococcus Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From
Pyrococcus Horikoshii
Length = 347
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSE 61
V V VP P EVL+KV A+S+ D I + K P I +VAGE++E+G
Sbjct: 19 VEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPG 78
Query: 62 VKNFKAGYNVVAILNHFSGG 81
V+ + G + V++ H G
Sbjct: 79 VEGIEVG-DYVSVETHIVCG 97
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii
Ot3
Length = 348
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSE 61
V V VP P EVL+KV A+S+ D I + K P I +VAGE++E+G
Sbjct: 20 VEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPG 79
Query: 62 VKNFKAGYNVVAILNHFSGG 81
V+ + G + V++ H G
Sbjct: 80 VEGIEVG-DYVSVETHIVCG 98
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI-----LPRKFPYIPATDVAGEIIE 57
+ VP P+ +VL+KVEA+ + D ++G + L K P ++AG+I E
Sbjct: 17 EIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE 76
Query: 58 VGSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRP 98
VG EV + G ++VA+ N + G G + + E P
Sbjct: 77 VGDEVVGYSKG-DLVAV-NPWQGEGNCYYCRIGEEHLCDSP 115
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFD-WKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
PVP + +++++ A SLN D ++ G L FP++PA+D +G + VG V
Sbjct: 47 PVPEAGEHDIIVRTLAVSLNYRDKLVLETGXG---LDLAFPFVPASDXSGVVEAVGKSVT 103
Query: 64 NFKAGYNVVAIL 75
F+ G V++
Sbjct: 104 RFRPGDRVISTF 115
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
V VP P +VL+K+EAS + D +G P+ P P+IP + G + VGS V
Sbjct: 24 VKVPLPGPGQVLVKIEASGVCHTDLHAAEG-DWPVKP-PLPFIPGHEGVGYVAAVGSGVT 81
Query: 64 NFKAGYNVVAILNHFSGGGLAEFAMVK-ESLTASR 97
K G + V I ++ G E + E+L S+
Sbjct: 82 RVKEG-DRVGIPWLYTACGCCEHCLTGWETLCESQ 115
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
V +P P+ +EVL+++ + + D ++ KGV R P I + AG I+EVG E+
Sbjct: 21 VNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFR-LPIILGHENAGTIVEVG-ELA 78
Query: 64 NFKAGYNVVA------------------------ILNHFSGGGLAEFAMVKES 92
K G NVV I + GG +E+ +VK S
Sbjct: 79 KVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSS 131
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEV 62
VPVP P +V +K+EAS + D G P+ P P+IP + G + VGS V
Sbjct: 19 EVPVPQPGPGQVQVKIEASGVCHTDLHAADG-DWPVKP-TLPFIPGHEGVGYVSAVGSGV 76
Query: 63 KNFKAGYNVVAILNHFSGGGLAEFAM 88
K G + V + +S G E +
Sbjct: 77 SRVKEG-DRVGVPWLYSACGYCEHCL 101
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
+PVP P+ +E+L+ V+ S + D G P LP K P + + AG ++ +G VK
Sbjct: 23 IPVPKPKANELLINVKYSGVCHTDLHAWHG-DWP-LPVKLPLVGGHEGAGVVVGMGENVK 80
Query: 64 NFKAG 68
+K G
Sbjct: 81 GWKIG 85
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 13 EVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVV 72
+V + V SSLN D G + I R FP IP D AG + SE F AG V+
Sbjct: 50 DVTVDVHWSSLNYKDALAITGKGKII--RNFPMIPGIDFAGTVRT--SEDPRFHAGQEVL 105
Query: 73 AI-----LNHFSGGGLAEFAMVKESLTASRP 98
NH+ GGLAE A VK + P
Sbjct: 106 LTGWGVGENHW--GGLAEQARVKGDWLVAMP 134
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 13 EVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVV 72
+V + V SSLN D G + I R FP IP D AG + SE F AG V+
Sbjct: 29 DVTVDVHWSSLNYKDALAITGKGKII--RHFPXIPGIDFAGTVH--ASEDPRFHAGQEVL 84
Query: 73 AI-----LNHFSGGGLAEFAMVKESLTASRPLEVS 102
NH+ GGLAE A VK + P +S
Sbjct: 85 LTGWGVGENHW--GGLAERARVKGDWLVALPAGLS 117
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEV 62
VP+P P ++ + ++AS + D +G P+ P P+IP + G + VGS V
Sbjct: 42 EVPIPQPGPGQIQVAIQASGVCHTDLHAAEG-DWPVKPNP-PFIPGHEGVGFVSAVGSGV 99
Query: 63 KNFKAGYNV 71
K+ K G V
Sbjct: 100 KHVKEGDRV 108
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From
Silverleaf Whitefly
Length = 352
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN 64
P+P P++DEVLL++ + D + K P + + +G +++VG VK+
Sbjct: 22 PIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH 81
Query: 65 FKAGYNV 71
K G V
Sbjct: 82 LKKGDRV 88
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPAT----DVAGEIIEV 58
+V +P P D++L+KVEA + D R +L +FP P + G ++E
Sbjct: 39 NVGIPEPGPDDLLVKVEACGICGTD--------RHLLHGEFPSTPPVTLGHEFCGIVVEA 90
Query: 59 GSEVKNFKAGYNV 71
GS V++ G +
Sbjct: 91 GSAVRDIAPGARI 103
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 9 PRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPA---TDVAGEIIEVGSEVKNF 65
P ++E+ ++ +A +N D I+ G+ P P +P+ T+ AG + +VGS VK+
Sbjct: 26 PAENEIQVENKAIGINFIDTYIRSGLYPP------PSLPSGLGTEAAGIVSKVGSGVKHI 79
Query: 66 KAGYNVV 72
KAG VV
Sbjct: 80 KAGDRVV 86
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex:
Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase
(Adh8) With The Cofactor Nadp
Length = 373
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
+ V P+ EV +K+ AS + D V + I+P KFP I + G + +G+ V
Sbjct: 27 ITVAPPKAHEVRIKILASGICGSD----SSVLKEIIPSKFPVILGHEAVGVVESIGAGVT 82
Query: 64 NFKAGYNVVAIL 75
K G V+ +
Sbjct: 83 CVKPGDKVIPLF 94
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 144 EFVKSLGADEVLDYKTPDGAALKSPS-GRKYDAVIHCARGIPWSTFEPNLAENGKVIDLT 202
EFVKS+GAD VL + A++ + G D V+ G + LA G+++ +
Sbjct: 198 EFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVG 257
Query: 203 PTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENL-----------VFLVKLLKEGKIKTLI 251
+ T +L L+ + GE L L KL+ EG ++ +
Sbjct: 258 FAAGGIPTIKVNRLLLRNASLIG---VAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPV 313
Query: 252 DSKHLLSKAEDAWAKGADGHATGKIILEP 280
++ LS+ A ADG GK++L P
Sbjct: 314 SARIPLSEGRQALQDFADGKVYGKMVLVP 342
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
Length = 379
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVA------------RPILPRKFPYIPATDV 51
+ P P DEVL+++EAS LN D + G A RPI+ + P
Sbjct: 25 IDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADXSTAKASGTAERPIVTARVPEGAXRSX 84
Query: 52 AGEIIEVGSEVKNFKAGYNVVA 73
AG ++ V N AG V A
Sbjct: 85 AGR-LDASXPVGNEGAGVVVEA 105
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh
By C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh
By C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh
By C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh
By C. Beijerinckii Adh
Length = 352
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 46 IPATDVAGEIIEVGSEVKNFKAGYNVV 72
I + GE++EVGSEVK+FK G VV
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVV 82
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL
DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding
Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii
Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL
DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding
Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii
Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL
DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding
Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii
Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL
DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding
Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii
Adh
Length = 352
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 46 IPATDVAGEIIEVGSEVKNFKAGYNVV 72
I + GE++EVGSEVK+FK G VV
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVV 82
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From
Thermoanaerobium Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From
Thermoanaerobium Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From
Thermoanaerobium Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From
Thermoanaerobium Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol
Dehydrogenase Substrate Complex From Thermoanaerobacter
Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol
Dehydrogenase Substrate Complex From Thermoanaerobacter
Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol
Dehydrogenase Substrate Complex From Thermoanaerobacter
Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol
Dehydrogenase Substrate Complex From Thermoanaerobacter
Brockii
Length = 352
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 50 DVAGEIIEVGSEVKNFKAGYNVV 72
+ GE++EVGSEVK+FK G VV
Sbjct: 60 EAVGEVVEVGSEVKDFKPGDRVV 82
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh
By E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh
By E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh
By E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh
By E. Histolytica Adh
Length = 352
Score = 31.6 bits (70), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 46 IPATDVAGEIIEVGSEVKNFKAGYNVV 72
I + GE++EVGSEVK+FK G VV
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVV 82
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 50 DVAGEIIEVGSEVKNFKAGYNVV 72
+ GE++EVGSEVK+FK G VV
Sbjct: 60 EAVGEVVEVGSEVKDFKPGDRVV 82
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFD---WKIK---KGVARPILPRKFPYIPATDVAGEI 55
V PVP P E+L++VEA+S+ D WK +G RP P + + +G +
Sbjct: 16 VDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRP------PLVTGHEFSGVV 69
Query: 56 IEVGSEVKNFKAGYNV 71
VG V+ + G +V
Sbjct: 70 EAVGPGVRRPQVGDHV 85
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 46 IPATDVAGEIIEVGSEVKNFKAGYNVV 72
I + GE++EVGSEVK+FK G V+
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVI 82
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 46 IPATDVAGEIIEVGSEVKNFKAGYNVV 72
I + GE++EVGSEVK+FK G V+
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVI 82
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 46 IPATDVAGEIIEVGSEVKNFKAGYNVV 72
I + GE++EVGSEVK+FK G V+
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVI 82
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 46 IPATDVAGEIIEVGSEVKNFKAGYNVV 72
I + GE++EVGSEVK+FK G V+
Sbjct: 56 ILGHEAVGEVVEVGSEVKDFKPGDRVI 82
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSE 61
V +P PTP E+LLKV A+ L D + A P + G + E+G
Sbjct: 16 VDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQ-YAYGLPLTLGHEGVGTVAELGEG 74
Query: 62 VKNFKAGYNVVAILNHFSGGGLAEFAMVKES 92
V F G + VA+ + G A +E+
Sbjct: 75 VTGFGVG-DAVAVYGPWGCGACHACARGREN 104
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFD---WKIKKGVARPILPRKFPYIPATDVAGEIIEVGSE 61
P+P P +EVLL++ + + D W+ + + I+ K P + + +G + +VGS
Sbjct: 25 PIPEPGPNEVLLRMHSVGICGSDVHYWEYGR-IGNFIV--KKPMVLGHEASGTVEKVGSS 81
Query: 62 VKNFKAGYNV 71
VK+ K G V
Sbjct: 82 VKHLKPGDRV 91
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 43 FPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI 74
+P IP ++AG I EVG VK FK G +VV +
Sbjct: 58 YPMIPGHEIAGIIKEVGKGVKKFKIG-DVVGV 88
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 43 FPYIPATDVAGEIIEVGSEVKNFKAGYNV 71
+P +P ++ GE+ EVGS+VK G V
Sbjct: 70 YPLVPGHEIVGEVTEVGSKVKKVNVGDKV 98
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFDWKI-KKGVARPILPRKFPYIPATDVAGEIIEVGSEVK 63
P+P P +EVLLK+ + + D + G + +K P + + +G +++VGS V+
Sbjct: 24 PIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKK-PMVLGHEASGTVVKVGSLVR 82
Query: 64 NFKAGYNV 71
+ + G V
Sbjct: 83 HLQPGDRV 90
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 7 PTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFK 66
PT EVL++++A + D G P+ P K P IP + G + EVG V + K
Sbjct: 21 PTISYGEVLVRIKACGVCHTDLHAAHG-DWPVKP-KLPLIPGHEGVGIVEEVGPGVTHLK 78
Query: 67 AGYNVVAILNHFSGGGLAEFAM 88
G + V I +S G ++ +
Sbjct: 79 VG-DRVGIPWLYSACGHCDYCL 99
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 7 PTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFK 66
PT EVL++++A + D G P+ P K P IP + G + EVG V + K
Sbjct: 21 PTISYGEVLVRIKACGVCHTDLHAAHG-DWPVKP-KLPLIPGHEGVGIVEEVGPGVTHLK 78
Query: 67 AGYNVVAILNHFSGGGLAEFAM 88
G + V I +S G ++ +
Sbjct: 79 VG-DRVGIPWLYSACGHCDYCL 99
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 5 PVPTPRKDEVLLKVEASSLNAFD---WKIKKGVARPILPRKFPYIPATDVAGEIIEVGSE 61
P+P P +EVLL+ + + D W+ + + I+ K P + + +G + +VGS
Sbjct: 25 PIPEPGPNEVLLRXHSVGICGSDVHYWEYGR-IGNFIV--KKPXVLGHEASGTVEKVGSS 81
Query: 62 VKNFKAGYNV 71
VK+ K G V
Sbjct: 82 VKHLKPGDRV 91
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
Query: 4 VPVPTPRKDEVLLKVEASSLN-------------AFDWKIKKGVARPILPR-KFPY-IPA 48
VPVP E L+ V ASS+N F + + G P+ R PY I
Sbjct: 81 VPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHIIG 140
Query: 49 TDVAGEIIEVGSEVKNFKAGYNVVA 73
+D+AG ++ G V ++ G VVA
Sbjct: 141 SDLAGVVLRTGPGVNAWQPGDEVVA 165
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKF-PYIPATDVAG 53
V +P P + EV+L+VEA LN D ++ G L R P+IP +V G
Sbjct: 16 VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGA---YLTRLHPPFIPGMEVVG 65
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 4 VPVPTPRKDEVLLKVEASSLN-------------AFDWKIKKGVARPILPR-KFPY-IPA 48
VPVP E L+ V ASS+N F + + G + R PY +
Sbjct: 63 VPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIG 122
Query: 49 TDVAGEIIEVGSEVKNFKAGYNVVAI-----LNHFSG-------------------GGLA 84
+D+AG ++ G V ++AG VVA L G GGLA
Sbjct: 123 SDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLA 182
Query: 85 EFAMVKESLTASRPLEVS 102
E A+VK + +P +S
Sbjct: 183 EIALVKSNQLMPKPDHLS 200
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKF-PYIPATDVAGEI 55
V +P P + EV+L+VEA LN D ++ G L R P+IP +V G +
Sbjct: 16 VDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGA---YLTRLHPPFIPGMEVVGVV 67
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 14 VLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAG 68
V+LKV ++++ D I +G R I+P+ ++ ++ GE++E GS+V+ G
Sbjct: 35 VILKVVSTNICGSDQHIYRG--RFIVPKG--HVLGHEITGEVVEKGSDVELMDIG 85
>pdb|2QZV|A Chain A, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
pdb|2QZV|B Chain B, Draft Crystal Structure Of The Vault Shell At 9 Angstroms
Resolution
Length = 873
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 229 IPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAK 266
IP +N V+ +K GK++ +I S ++L++ E W K
Sbjct: 392 IPLDQNEGIYVQDVKTGKVRAVIGSTYMLTQDEVLWEK 429
>pdb|2ZUO|A Chain A, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|B Chain B, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|C Chain C, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|D Chain D, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|E Chain E, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|F Chain F, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|G Chain G, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|H Chain H, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|I Chain I, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|J Chain J, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|K Chain K, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|L Chain L, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZUO|M Chain M, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|N Chain N, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|O Chain O, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|P Chain P, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Q Chain Q, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|R Chain R, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|S Chain S, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|T Chain T, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|U Chain U, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|V Chain V, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|W Chain W, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|X Chain X, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Y Chain Y, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV4|Z Chain Z, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|AA Chain a, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|BB Chain b, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|CC Chain c, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|DD Chain d, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|EE Chain e, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|FF Chain f, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|GG Chain g, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|HH Chain h, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|II Chain i, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|JJ Chain j, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|KK Chain k, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|LL Chain l, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
pdb|2ZV5|MM Chain m, The Structure Of Rat Liver Vault At 3.5 Angstrom
Resolution
Length = 861
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 229 IPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAK 266
IP +N V+ +K GK++ +I S ++L++ E W K
Sbjct: 380 IPLDQNEGIYVQDVKTGKVRAVIGSTYMLTQDEVLWEK 417
>pdb|3R50|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|C Chain C, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|D Chain D, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R50|E Chain E, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R51|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R51|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|C Chain C, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|3R52|D Chain D, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|A Chain A, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|B Chain B, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|C Chain C, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
pdb|4DDN|D Chain D, Structure Analysis Of A Wound-Inducible Lectin Ipomoelin
From Sweet Potato
Length = 160
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 40 PRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVV 72
P Y ++ G+IIE+ + N+K GYNV+
Sbjct: 75 PEPLTYTETVNIDGDIIEISGMIANYK-GYNVI 106
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 43/140 (30%)
Query: 4 VPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKF----------------PY-I 46
VP+P DEVL+ V ASS+N + + PI F PY +
Sbjct: 55 VPMPELAPDEVLVAVMASSINYN--TVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHV 112
Query: 47 PATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG------------------------GG 82
+D +G ++ G V+ +K G +V+ H GG
Sbjct: 113 LGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGG 172
Query: 83 LAEFAMVKESLTASRPLEVS 102
LAE+ +V+ S +P ++
Sbjct: 173 LAEYGVVRASQLLPKPAHLT 192
>pdb|3K01|A Chain A, Crystal Structures Of The Gach Receptor Of Streptomyces
Glaucescens Gla.O In The Unliganded Form And In Complex
With Acarbose And An Acarbose Homolog. Comparison With
Acarbose-Loaded Maltose Binding Protein Of Salmonella
Typhimurium
Length = 412
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 247 IKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278
IK L+DSK ++ A D W + +GK+ +
Sbjct: 225 IKDLVDSKAAITDASDGWNNMQNAFKSGKVAM 256
>pdb|3JZJ|A Chain A, Crystal Structures Of The Gach Receptor Of Streptomyces
Glaucescens Gla.o In The Unliganded Form And In Complex
With Acarbose And An Acarbose Homolog. Comparison With
Acarbose-loaded Maltose Binding Protein Of Salmonella
Typhimurium.
pdb|3K00|A Chain A, Crystal Structures Of The Gach Receptor Of Streptomyces
Glaucescens Gla.O In The Unliganded Form And In Complex
With Acarbose And An Acarbose Homolog. Comparison With
Acarbose-Loaded Maltose Binding Protein Of Salmonella
Typhimurium.
pdb|3K02|A Chain A, Crystal Structures Of The Gach Receptor Of Streptomyces
Glaucescens Gla.O In The Unliganded Form And In Complex
With Acarbose And An Acarbose Homolog. Comparison With
Acarbose-Loaded Maltose Binding Protein Of Salmonella
Typhimurium
Length = 409
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 247 IKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278
IK L+DSK ++ A D W + +GK+ +
Sbjct: 222 IKDLVDSKAAITDASDGWNNMQNAFKSGKVAM 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,144,100
Number of Sequences: 62578
Number of extensions: 326815
Number of successful extensions: 989
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 916
Number of HSP's gapped (non-prelim): 84
length of query: 280
length of database: 14,973,337
effective HSP length: 98
effective length of query: 182
effective length of database: 8,840,693
effective search space: 1609006126
effective search space used: 1609006126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)