Query 048785
Match_columns 280
No_of_seqs 114 out of 1646
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 13:11:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048785.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048785hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 1.4E-50 3E-55 330.5 18.5 272 1-280 18-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 1.7E-46 3.8E-51 313.6 21.7 278 1-280 17-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 4.3E-44 9.3E-49 274.1 16.6 274 1-280 25-330 (336)
4 KOG0024 Sorbitol dehydrogenase 100.0 7.4E-44 1.6E-48 282.8 16.9 275 1-279 18-351 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 2.1E-42 4.5E-47 273.9 17.7 272 2-280 27-354 (360)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 2.9E-41 6.2E-46 290.0 20.3 272 2-278 24-371 (371)
7 cd08239 THR_DH_like L-threonin 100.0 9.4E-41 2E-45 283.8 21.5 274 2-280 15-339 (339)
8 PRK09880 L-idonate 5-dehydroge 100.0 1.6E-40 3.5E-45 282.5 22.1 271 2-280 19-343 (343)
9 PLN02178 cinnamyl-alcohol dehy 100.0 2.3E-40 4.9E-45 283.7 22.0 270 2-280 22-348 (375)
10 PLN02586 probable cinnamyl alc 100.0 2.9E-40 6.3E-45 282.2 22.4 270 2-280 28-353 (360)
11 cd08291 ETR_like_1 2-enoyl thi 100.0 3.5E-40 7.6E-45 278.6 21.8 272 2-279 21-324 (324)
12 TIGR02822 adh_fam_2 zinc-bindi 100.0 6.4E-40 1.4E-44 276.9 23.1 265 1-279 17-329 (329)
13 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.1E-40 8.9E-45 281.6 20.7 274 1-279 16-357 (358)
14 COG1062 AdhC Zn-dependent alco 100.0 6.1E-41 1.3E-45 268.5 14.0 273 1-279 17-365 (366)
15 PLN02827 Alcohol dehydrogenase 100.0 4.8E-39 1E-43 276.2 20.4 270 2-280 28-376 (378)
16 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.1E-38 2.4E-43 273.4 21.4 273 2-280 17-368 (368)
17 cd08230 glucose_DH Glucose deh 100.0 1.2E-38 2.7E-43 272.2 21.2 271 1-280 15-355 (355)
18 PLN02514 cinnamyl-alcohol dehy 100.0 2.3E-38 5E-43 270.4 22.7 270 2-280 25-350 (357)
19 PLN02740 Alcohol dehydrogenase 100.0 1.6E-38 3.6E-43 273.6 21.0 274 2-280 26-381 (381)
20 cd08300 alcohol_DH_class_III c 100.0 4.4E-38 9.5E-43 269.9 21.0 272 2-279 18-368 (368)
21 TIGR03201 dearomat_had 6-hydro 100.0 9.5E-38 2.1E-42 266.1 22.4 273 1-280 13-349 (349)
22 TIGR01202 bchC 2-desacetyl-2-h 100.0 5.7E-38 1.2E-42 262.8 20.6 263 1-279 15-308 (308)
23 PRK10309 galactitol-1-phosphat 100.0 1.1E-37 2.4E-42 265.8 22.2 273 2-280 15-346 (347)
24 cd08277 liver_alcohol_DH_like 100.0 7.4E-38 1.6E-42 268.3 20.5 271 2-279 18-365 (365)
25 cd08301 alcohol_DH_plants Plan 100.0 1E-37 2.2E-42 267.9 20.6 273 1-278 17-368 (369)
26 TIGR02819 fdhA_non_GSH formald 100.0 1.6E-37 3.4E-42 267.4 21.0 273 1-280 16-390 (393)
27 PLN03154 putative allyl alcoho 100.0 2.1E-37 4.6E-42 263.4 21.5 269 3-280 34-345 (348)
28 cd08237 ribitol-5-phosphate_DH 100.0 5.3E-37 1.1E-41 260.5 20.9 264 1-280 16-339 (341)
29 TIGR02825 B4_12hDH leukotriene 100.0 7.4E-37 1.6E-41 258.4 20.2 263 2-279 22-325 (325)
30 cd08293 PTGR2 Prostaglandin re 100.0 1.9E-36 4.1E-41 258.1 22.8 274 2-280 26-345 (345)
31 cd08233 butanediol_DH_like (2R 100.0 1.3E-36 2.8E-41 259.6 20.9 275 1-279 14-351 (351)
32 cd08292 ETR_like_2 2-enoyl thi 100.0 2.9E-36 6.3E-41 254.7 22.3 272 2-279 19-324 (324)
33 KOG0025 Zn2+-binding dehydroge 100.0 2.1E-36 4.5E-41 236.0 19.3 275 1-279 37-351 (354)
34 cd08231 MDR_TM0436_like Hypoth 100.0 2.8E-36 6E-41 258.5 21.9 275 1-280 15-361 (361)
35 COG1063 Tdh Threonine dehydrog 100.0 1.5E-36 3.2E-41 257.2 19.6 274 2-280 16-350 (350)
36 KOG0022 Alcohol dehydrogenase, 100.0 3.7E-37 8.1E-42 243.0 13.9 275 1-280 22-375 (375)
37 cd08238 sorbose_phosphate_red 100.0 3.1E-36 6.7E-41 261.7 20.6 278 1-280 16-368 (410)
38 cd08274 MDR9 Medium chain dehy 100.0 2.1E-35 4.5E-40 252.2 23.9 276 3-280 20-350 (350)
39 cd08295 double_bond_reductase_ 100.0 1.1E-35 2.4E-40 252.5 21.7 268 5-280 31-338 (338)
40 KOG1198 Zinc-binding oxidoredu 100.0 2.7E-35 5.9E-40 246.3 21.2 276 2-280 23-345 (347)
41 cd08294 leukotriene_B4_DH_like 100.0 2.8E-35 6E-40 249.3 20.6 265 1-280 23-329 (329)
42 cd08296 CAD_like Cinnamyl alco 100.0 5.2E-35 1.1E-39 247.9 21.8 270 1-279 15-333 (333)
43 cd05284 arabinose_DH_like D-ar 100.0 1.3E-34 2.8E-39 246.3 21.8 275 2-280 16-340 (340)
44 cd08244 MDR_enoyl_red Possible 100.0 3E-34 6.4E-39 242.5 23.8 276 3-280 19-324 (324)
45 cd05283 CAD1 Cinnamyl alcohol 100.0 3E-34 6.6E-39 243.6 23.5 270 1-279 14-337 (337)
46 cd08246 crotonyl_coA_red croto 100.0 1.3E-34 2.9E-39 250.6 21.5 277 2-279 33-392 (393)
47 cd08285 NADP_ADH NADP(H)-depen 100.0 1.4E-34 3.1E-39 247.0 21.1 275 2-280 15-351 (351)
48 TIGR02817 adh_fam_1 zinc-bindi 100.0 3.6E-34 7.8E-39 243.2 22.9 275 2-279 20-334 (336)
49 COG2130 Putative NADP-dependen 100.0 1.9E-34 4.2E-39 227.1 18.6 268 1-280 29-338 (340)
50 cd08290 ETR 2-enoyl thioester 100.0 4.9E-34 1.1E-38 242.8 21.2 277 1-280 18-341 (341)
51 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3.9E-34 8.4E-39 245.7 19.9 274 2-279 16-367 (367)
52 cd05282 ETR_like 2-enoyl thioe 100.0 1.6E-33 3.5E-38 237.9 22.1 273 2-279 17-323 (323)
53 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.4E-33 5.2E-38 237.0 22.3 274 2-280 18-325 (325)
54 cd08270 MDR4 Medium chain dehy 100.0 4.9E-33 1.1E-37 233.1 23.9 262 2-280 17-305 (305)
55 cd08283 FDH_like_1 Glutathione 100.0 1.6E-33 3.5E-38 243.0 21.2 274 2-280 15-386 (386)
56 PRK10754 quinone oxidoreductas 100.0 3E-33 6.4E-38 236.7 21.9 274 2-280 19-327 (327)
57 cd08278 benzyl_alcohol_DH Benz 100.0 2.6E-33 5.6E-38 240.2 21.6 272 2-279 18-365 (365)
58 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.3E-33 5.1E-38 239.5 21.1 277 1-280 15-350 (350)
59 PRK10083 putative oxidoreducta 100.0 3.8E-33 8.3E-38 237.2 21.2 271 1-280 14-337 (339)
60 TIGR01751 crot-CoA-red crotony 100.0 3.3E-33 7.2E-38 242.1 20.8 278 2-280 28-387 (398)
61 cd08297 CAD3 Cinnamyl alcohol 100.0 7E-33 1.5E-37 235.7 22.4 274 2-280 17-341 (341)
62 cd05278 FDH_like Formaldehyde 100.0 2.5E-33 5.4E-38 239.1 19.3 274 2-280 15-347 (347)
63 PRK09422 ethanol-active dehydr 100.0 5E-33 1.1E-37 236.4 20.7 270 1-279 15-335 (338)
64 cd08299 alcohol_DH_class_I_II_ 100.0 5.5E-33 1.2E-37 238.6 20.7 273 1-280 22-373 (373)
65 PRK05396 tdh L-threonine 3-deh 100.0 7.5E-33 1.6E-37 235.5 21.2 275 2-279 16-339 (341)
66 TIGR00692 tdh L-threonine 3-de 100.0 1.5E-32 3.3E-37 233.5 21.6 277 1-280 13-340 (340)
67 cd05285 sorbitol_DH Sorbitol d 100.0 1.3E-32 2.7E-37 234.3 21.0 274 1-279 12-342 (343)
68 PTZ00354 alcohol dehydrogenase 100.0 2.3E-32 5E-37 231.8 22.5 273 2-279 19-327 (334)
69 PRK13771 putative alcohol dehy 100.0 7.4E-33 1.6E-37 235.0 19.4 271 1-280 15-333 (334)
70 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.2E-32 2.6E-37 235.0 20.8 273 1-278 14-350 (350)
71 cd08232 idonate-5-DH L-idonate 100.0 2.3E-32 4.9E-37 232.4 22.3 274 1-280 11-339 (339)
72 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.9E-32 4.1E-37 232.7 21.6 271 2-280 15-337 (337)
73 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.5E-32 5.5E-37 232.0 22.4 274 2-280 17-338 (338)
74 cd08289 MDR_yhfp_like Yhfp put 100.0 1.3E-32 2.8E-37 232.7 20.4 275 2-280 18-326 (326)
75 cd08249 enoyl_reductase_like e 100.0 1.4E-32 3.1E-37 233.5 20.6 274 1-280 16-339 (339)
76 cd08279 Zn_ADH_class_III Class 100.0 1.7E-32 3.7E-37 235.1 21.1 272 2-277 16-362 (363)
77 cd08286 FDH_like_ADH2 formalde 100.0 2.3E-32 4.9E-37 233.0 21.7 274 1-280 14-345 (345)
78 cd08276 MDR7 Medium chain dehy 100.0 5.2E-32 1.1E-36 229.8 23.8 276 2-280 18-336 (336)
79 cd08282 PFDH_like Pseudomonas 100.0 2.6E-32 5.7E-37 234.8 21.9 270 2-280 15-375 (375)
80 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.9E-32 4.1E-37 232.2 20.8 270 2-279 16-332 (332)
81 cd08267 MDR1 Medium chain dehy 100.0 2.5E-31 5.4E-36 224.0 26.9 275 1-278 16-319 (319)
82 cd05279 Zn_ADH1 Liver alcohol 100.0 1.4E-32 3.1E-37 235.6 19.5 270 2-278 16-364 (365)
83 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.2E-32 4.7E-37 233.1 20.5 273 2-279 16-344 (345)
84 cd08248 RTN4I1 Human Reticulon 100.0 1.2E-31 2.7E-36 228.9 25.1 277 1-279 18-350 (350)
85 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.3E-32 7.1E-37 231.6 21.4 275 1-279 13-341 (341)
86 TIGR02823 oxido_YhdH putative 100.0 5.5E-32 1.2E-36 228.6 22.5 274 1-280 16-323 (323)
87 cd08235 iditol_2_DH_like L-idi 100.0 4.5E-32 9.7E-37 231.0 21.5 271 2-279 15-343 (343)
88 cd08284 FDH_like_2 Glutathione 100.0 4.1E-32 9E-37 231.3 21.1 271 2-280 15-344 (344)
89 cd08269 Zn_ADH9 Alcohol dehydr 100.0 5.2E-32 1.1E-36 227.6 21.0 270 1-278 9-311 (312)
90 cd08265 Zn_ADH3 Alcohol dehydr 100.0 4.7E-32 1E-36 233.8 21.1 276 1-278 41-383 (384)
91 cd08250 Mgc45594_like Mgc45594 100.0 7.9E-32 1.7E-36 228.2 21.9 270 1-279 20-329 (329)
92 cd08243 quinone_oxidoreductase 100.0 9.6E-32 2.1E-36 226.6 22.1 271 2-278 18-319 (320)
93 PLN02702 L-idonate 5-dehydroge 100.0 6.7E-32 1.5E-36 231.5 21.3 273 2-279 32-363 (364)
94 cd05281 TDH Threonine dehydrog 100.0 9.9E-32 2.1E-36 228.6 21.7 276 2-280 16-341 (341)
95 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.9E-31 4E-36 226.8 22.8 276 2-280 18-342 (342)
96 cd08236 sugar_DH NAD(P)-depend 100.0 8.9E-32 1.9E-36 229.1 20.5 271 2-278 15-343 (343)
97 cd08247 AST1_like AST1 is a cy 100.0 1E-30 2.2E-35 223.4 26.1 276 3-280 17-352 (352)
98 cd08242 MDR_like Medium chain 100.0 2E-31 4.3E-36 224.8 21.0 256 1-280 14-319 (319)
99 cd08271 MDR5 Medium chain dehy 100.0 8.4E-31 1.8E-35 221.4 24.2 277 1-280 17-325 (325)
100 cd08287 FDH_like_ADH3 formalde 100.0 2.7E-31 5.9E-36 226.3 21.2 272 1-280 14-345 (345)
101 cd08298 CAD2 Cinnamyl alcohol 100.0 6.4E-31 1.4E-35 222.6 22.8 262 2-278 20-329 (329)
102 cd05289 MDR_like_2 alcohol deh 100.0 3.9E-30 8.4E-35 215.6 26.6 270 2-278 18-309 (309)
103 cd05286 QOR2 Quinone oxidoredu 100.0 9.3E-31 2E-35 220.2 22.7 271 3-280 18-320 (320)
104 cd08252 AL_MDR Arginate lyase 100.0 1.5E-30 3.3E-35 221.0 23.8 272 2-279 21-336 (336)
105 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.6E-31 5.6E-36 224.7 18.3 262 2-276 17-324 (325)
106 cd08273 MDR8 Medium chain dehy 100.0 2.5E-30 5.5E-35 219.1 23.8 270 2-278 18-330 (331)
107 cd08251 polyketide_synthase po 100.0 5.9E-31 1.3E-35 220.0 19.3 270 5-278 1-303 (303)
108 cd08245 CAD Cinnamyl alcohol d 100.0 2.3E-30 5E-35 219.3 23.0 269 1-278 14-330 (330)
109 cd08253 zeta_crystallin Zeta-c 100.0 1.8E-30 3.9E-35 219.0 22.2 276 2-280 18-325 (325)
110 cd05276 p53_inducible_oxidored 100.0 1.6E-30 3.5E-35 219.1 21.2 272 2-278 18-323 (323)
111 cd08234 threonine_DH_like L-th 100.0 1.8E-30 3.8E-35 220.4 21.1 268 2-278 15-333 (334)
112 cd08272 MDR6 Medium chain dehy 100.0 5.3E-30 1.2E-34 216.4 23.3 273 2-280 18-326 (326)
113 cd05288 PGDH Prostaglandin deh 100.0 1.6E-30 3.4E-35 220.2 19.8 269 1-278 22-329 (329)
114 cd08288 MDR_yhdh Yhdh putative 100.0 6.8E-30 1.5E-34 215.9 22.1 274 1-280 17-324 (324)
115 TIGR02824 quinone_pig3 putativ 100.0 2.1E-29 4.5E-34 212.7 21.8 273 3-280 19-325 (325)
116 cd08268 MDR2 Medium chain dehy 100.0 3.2E-29 7E-34 211.7 21.2 277 2-280 18-328 (328)
117 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.9E-29 4.2E-34 211.3 19.0 239 1-245 16-306 (306)
118 cd05195 enoyl_red enoyl reduct 100.0 5.3E-29 1.1E-33 206.8 19.2 258 12-278 1-293 (293)
119 cd08275 MDR3 Medium chain dehy 100.0 1.9E-28 4.1E-33 208.0 21.3 273 3-280 18-337 (337)
120 cd08241 QOR1 Quinone oxidoredu 100.0 5.2E-28 1.1E-32 203.8 22.7 271 3-279 19-323 (323)
121 TIGR03366 HpnZ_proposed putati 100.0 1.4E-29 3E-34 209.4 12.5 214 46-260 1-280 (280)
122 smart00829 PKS_ER Enoylreducta 100.0 8.8E-28 1.9E-32 199.2 18.9 252 16-278 2-288 (288)
123 cd05188 MDR Medium chain reduc 99.9 1.5E-26 3.3E-31 190.3 18.1 226 13-241 1-270 (271)
124 KOG1196 Predicted NAD-dependen 99.9 3.5E-26 7.5E-31 180.0 18.2 264 7-280 33-340 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 1.7E-24 3.7E-29 179.0 16.5 224 40-278 17-277 (277)
126 KOG1202 Animal-type fatty acid 99.9 1.7E-24 3.6E-29 195.3 9.5 258 9-280 1442-1741(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.8 1.6E-19 3.4E-24 127.7 9.4 85 11-97 1-109 (109)
128 PF13602 ADH_zinc_N_2: Zinc-bi 99.7 1.9E-16 4.2E-21 115.3 6.8 120 149-278 1-127 (127)
129 PF00107 ADH_zinc_N: Zinc-bind 99.5 5.6E-15 1.2E-19 107.9 3.1 119 125-244 8-130 (130)
130 cd00401 AdoHcyase S-adenosyl-L 98.6 9E-08 2E-12 82.3 6.7 141 126-279 220-375 (413)
131 PRK09424 pntA NAD(P) transhydr 98.3 3.1E-06 6.8E-11 74.8 9.7 122 126-248 183-333 (509)
132 PF11017 DUF2855: Protein of u 96.8 0.018 3.9E-07 47.9 10.2 58 132-194 163-222 (314)
133 PRK00517 prmA ribosomal protei 95.6 0.024 5.2E-07 46.1 5.0 124 63-204 65-215 (250)
134 PRK11873 arsM arsenite S-adeno 95.5 0.027 5.9E-07 46.4 5.2 143 127-277 96-258 (272)
135 TIGR00561 pntA NAD(P) transhyd 94.0 0.1 2.2E-06 46.6 5.1 80 126-205 182-287 (511)
136 COG2264 PrmA Ribosomal protein 89.2 0.57 1.2E-05 38.9 4.1 131 64-205 108-266 (300)
137 COG2242 CobL Precorrin-6B meth 86.5 1.7 3.6E-05 33.4 4.8 69 131-201 58-134 (187)
138 PF06325 PrmA: Ribosomal prote 86.5 0.28 6E-06 40.8 0.7 74 126-205 178-262 (295)
139 COG2518 Pcm Protein-L-isoaspar 84.4 3.5 7.5E-05 32.4 5.7 74 126-202 90-169 (209)
140 PRK05476 S-adenosyl-L-homocyst 84.1 1.3 2.8E-05 38.9 3.7 70 126-205 230-302 (425)
141 TIGR00406 prmA ribosomal prote 83.5 2.5 5.4E-05 35.2 5.1 34 170-203 223-260 (288)
142 TIGR00936 ahcY adenosylhomocys 83.3 1.5 3.3E-05 38.3 3.8 70 126-205 213-285 (406)
143 PTZ00414 10 kDa heat shock pro 82.5 1.7 3.8E-05 29.6 3.1 23 52-74 46-72 (100)
144 COG2227 UbiG 2-polyprenyl-3-me 82.3 1.3 2.7E-05 35.5 2.6 70 130-202 80-161 (243)
145 cd00320 cpn10 Chaperonin 10 Kd 82.1 1.8 3.9E-05 29.2 3.0 24 51-74 35-67 (93)
146 PRK08306 dipicolinate synthase 81.4 2.2 4.8E-05 35.6 4.0 75 126-207 170-246 (296)
147 PRK00364 groES co-chaperonin G 80.4 1.9 4.1E-05 29.2 2.7 24 51-74 36-68 (95)
148 PLN02494 adenosylhomocysteinas 78.8 3.8 8.2E-05 36.5 4.7 69 126-204 272-343 (477)
149 KOG4300 Predicted methyltransf 78.7 3.5 7.5E-05 32.3 3.9 86 131-219 99-201 (252)
150 PF08241 Methyltransf_11: Meth 77.4 1.1 2.5E-05 29.5 1.0 72 127-199 15-94 (95)
151 PRK14533 groES co-chaperonin G 77.1 3.4 7.3E-05 27.7 3.1 23 52-74 37-63 (91)
152 PF12847 Methyltransf_18: Meth 76.4 1.8 3.8E-05 29.9 1.7 69 129-200 23-109 (112)
153 PRK11705 cyclopropane fatty ac 76.3 4.7 0.0001 35.1 4.6 72 126-201 185-266 (383)
154 KOG1252 Cystathionine beta-syn 76.0 34 0.00073 29.1 9.1 44 233-279 292-335 (362)
155 PF00166 Cpn10: Chaperonin 10 75.6 2.3 5E-05 28.7 2.0 24 51-74 35-67 (93)
156 PRK00377 cbiT cobalt-precorrin 73.9 6.1 0.00013 30.7 4.3 68 132-200 66-143 (198)
157 TIGR00518 alaDH alanine dehydr 70.9 8.2 0.00018 33.4 4.8 77 126-205 185-270 (370)
158 PTZ00075 Adenosylhomocysteinas 70.3 23 0.0005 31.7 7.4 70 126-205 272-344 (476)
159 PRK00107 gidB 16S rRNA methylt 69.6 11 0.00024 29.1 4.8 70 130-202 68-145 (187)
160 COG0234 GroS Co-chaperonin Gro 66.6 7 0.00015 26.3 2.7 23 52-74 37-68 (96)
161 COG2226 UbiE Methylase involve 63.6 37 0.0008 27.4 6.8 77 126-204 69-158 (238)
162 PLN02244 tocopherol O-methyltr 60.9 9.2 0.0002 32.7 3.2 72 126-201 136-222 (340)
163 KOG1641 Mitochondrial chaperon 60.5 17 0.00037 24.7 3.6 26 49-74 42-76 (104)
164 TIGR02469 CbiT precorrin-6Y C5 60.0 25 0.00053 24.4 4.9 31 171-201 87-121 (124)
165 TIGR03840 TMPT_Se_Te thiopurin 59.3 11 0.00025 29.7 3.2 32 171-202 112-152 (213)
166 PRK11207 tellurite resistance 58.8 8.4 0.00018 30.0 2.4 69 130-201 51-133 (197)
167 PF05724 TPMT: Thiopurine S-me 54.5 14 0.00031 29.3 3.1 29 171-199 115-152 (218)
168 PRK10258 biotin biosynthesis p 54.4 1.1E+02 0.0024 24.5 9.0 69 130-202 63-140 (251)
169 PRK11579 putative oxidoreducta 53.0 1.4E+02 0.0031 25.4 9.5 115 126-247 24-142 (346)
170 PF02826 2-Hacid_dh_C: D-isome 53.0 30 0.00064 26.4 4.5 97 126-258 54-157 (178)
171 PRK13942 protein-L-isoaspartat 51.8 56 0.0012 25.7 6.1 72 126-201 94-175 (212)
172 cd05213 NAD_bind_Glutamyl_tRNA 51.1 13 0.00029 31.3 2.5 85 92-185 139-251 (311)
173 PF02353 CMAS: Mycolic acid cy 50.8 9.4 0.0002 31.5 1.5 69 126-200 80-164 (273)
174 PRK12771 putative glutamate sy 50.5 18 0.00039 33.3 3.5 56 142-199 193-250 (564)
175 PRK11088 rrmA 23S rRNA methylt 49.9 42 0.00092 27.5 5.3 70 132-205 113-184 (272)
176 COG4122 Predicted O-methyltran 49.8 29 0.00063 27.6 4.0 75 126-200 77-164 (219)
177 PRK14103 trans-aconitate 2-met 48.5 36 0.00078 27.6 4.6 65 131-201 53-125 (255)
178 PRK13256 thiopurine S-methyltr 48.0 30 0.00065 27.7 3.9 31 171-201 123-162 (226)
179 PRK13943 protein-L-isoaspartat 47.8 37 0.00079 28.9 4.6 74 126-201 98-179 (322)
180 PF08242 Methyltransf_12: Meth 47.2 25 0.00054 23.4 3.0 28 171-198 65-99 (99)
181 TIGR02853 spore_dpaA dipicolin 46.5 50 0.0011 27.5 5.2 75 126-207 169-245 (287)
182 TIGR00138 gidB 16S rRNA methyl 45.3 47 0.001 25.4 4.6 67 131-202 66-142 (181)
183 TIGR00477 tehB tellurite resis 44.0 20 0.00043 27.8 2.4 31 171-201 93-132 (195)
184 PRK04266 fibrillarin; Provisio 43.3 75 0.0016 25.4 5.6 29 172-200 141-174 (226)
185 PF00670 AdoHcyase_NAD: S-aden 43.3 1.4E+02 0.0031 22.5 7.1 72 126-207 41-115 (162)
186 cd06919 Asp_decarbox Aspartate 43.1 18 0.0004 25.1 1.7 30 45-74 58-87 (111)
187 PRK13255 thiopurine S-methyltr 42.1 26 0.00056 27.8 2.8 30 171-200 115-153 (218)
188 PRK11036 putative S-adenosyl-L 42.0 21 0.00045 29.0 2.3 70 130-202 65-149 (255)
189 KOG1209 1-Acyl dihydroxyaceton 41.9 57 0.0012 26.0 4.4 55 129-183 30-92 (289)
190 PRK04148 hypothetical protein; 40.5 59 0.0013 23.6 4.1 26 129-154 37-63 (134)
191 TIGR00223 panD L-aspartate-alp 40.3 22 0.00047 25.3 1.8 30 45-74 59-88 (126)
192 PF10844 DUF2577: Protein of u 40.3 34 0.00074 23.3 2.8 23 64-90 76-98 (100)
193 PRK13944 protein-L-isoaspartat 40.0 80 0.0017 24.6 5.2 72 126-201 90-172 (205)
194 PRK01683 trans-aconitate 2-met 38.9 73 0.0016 25.7 5.1 67 131-202 55-130 (258)
195 COG2230 Cfa Cyclopropane fatty 38.3 45 0.00099 27.7 3.6 68 126-202 90-176 (283)
196 COG2519 GCD14 tRNA(1-methylade 38.3 75 0.0016 25.9 4.7 78 126-205 112-198 (256)
197 TIGR00080 pimt protein-L-isoas 38.0 1.1E+02 0.0023 24.0 5.8 31 171-201 145-176 (215)
198 COG0144 Sun tRNA and rRNA cyto 37.9 73 0.0016 27.5 5.0 68 131-199 182-285 (355)
199 PRK10206 putative oxidoreducta 37.6 1.9E+02 0.0042 24.7 7.6 110 131-247 27-142 (344)
200 PLN02336 phosphoethanolamine N 37.6 35 0.00076 30.6 3.2 72 126-201 284-368 (475)
201 PRK05449 aspartate alpha-decar 37.1 25 0.00055 25.0 1.7 30 45-74 59-88 (126)
202 COG1092 Predicted SAM-dependen 36.8 35 0.00075 29.9 2.9 74 129-202 237-336 (393)
203 PF02261 Asp_decarbox: Asparta 35.9 24 0.00052 24.7 1.4 30 45-74 59-88 (116)
204 PRK14903 16S rRNA methyltransf 35.6 59 0.0013 28.9 4.2 72 126-200 255-364 (431)
205 KOG0339 ATP-dependent RNA heli 34.6 3.5E+02 0.0077 24.8 8.5 79 185-263 391-487 (731)
206 TIGR01532 E4PD_g-proteo D-eryt 33.9 29 0.00062 29.5 1.9 33 171-203 88-121 (325)
207 TIGR00563 rsmB ribosomal RNA s 33.9 1.3E+02 0.0029 26.6 6.2 73 126-200 256-366 (426)
208 COG0031 CysK Cysteine synthase 33.1 91 0.002 26.2 4.6 14 126-139 103-116 (300)
209 PTZ00098 phosphoethanolamine N 32.7 52 0.0011 26.9 3.2 74 127-202 71-156 (263)
210 PF13847 Methyltransf_31: Meth 32.7 73 0.0016 23.2 3.8 69 131-202 28-110 (152)
211 KOG1663 O-methyltransferase [S 32.4 81 0.0017 25.3 4.0 70 131-200 98-181 (237)
212 PRK14901 16S rRNA methyltransf 32.4 92 0.002 27.7 4.9 16 185-200 367-382 (434)
213 COG0027 PurT Formate-dependent 31.9 1E+02 0.0022 26.1 4.6 50 230-279 136-195 (394)
214 PLN02476 O-methyltransferase 31.6 72 0.0016 26.5 3.8 75 126-200 136-226 (278)
215 PRK14904 16S rRNA methyltransf 31.6 1.2E+02 0.0025 27.1 5.5 65 132-201 276-376 (445)
216 PLN02233 ubiquinone biosynthes 31.5 1.2E+02 0.0026 24.8 5.1 33 170-202 143-182 (261)
217 COG0686 Ald Alanine dehydrogen 29.5 50 0.0011 27.9 2.5 74 126-202 186-268 (371)
218 TIGR00715 precor6x_red precorr 29.1 42 0.00091 27.4 2.1 53 129-181 21-74 (256)
219 PLN02781 Probable caffeoyl-CoA 29.0 95 0.0021 24.9 4.1 75 126-200 86-176 (234)
220 PRK12335 tellurite resistance 28.9 35 0.00077 28.3 1.7 67 130-201 141-222 (287)
221 TIGR03215 ac_ald_DH_ac acetald 28.8 1.1E+02 0.0025 25.4 4.6 70 126-201 20-94 (285)
222 PF02254 TrkA_N: TrkA-N domain 28.5 83 0.0018 21.5 3.3 54 130-184 20-74 (116)
223 COG4091 Predicted homoserine d 28.4 1.4E+02 0.0029 25.9 4.9 78 170-248 99-179 (438)
224 TIGR03855 NAD_NadX aspartate d 27.9 1.6E+02 0.0036 23.6 5.2 64 131-202 1-68 (229)
225 PF11132 SplA: Transcriptional 27.4 1E+02 0.0022 19.6 3.0 34 63-99 4-37 (75)
226 PRK06719 precorrin-2 dehydroge 27.3 1.4E+02 0.003 22.3 4.4 23 171-193 69-91 (157)
227 PRK08317 hypothetical protein; 27.3 98 0.0021 24.3 4.0 68 131-202 44-124 (241)
228 COG3602 Uncharacterized protei 27.0 30 0.00065 24.1 0.7 45 65-113 18-68 (134)
229 COG1171 IlvA Threonine dehydra 26.7 1.8E+02 0.0039 25.0 5.4 79 126-205 115-212 (347)
230 smart00846 Gp_dh_N Glyceraldeh 26.4 48 0.001 24.5 1.8 35 171-205 86-121 (149)
231 PLN03075 nicotianamine synthas 26.1 76 0.0016 26.6 3.1 70 131-202 149-233 (296)
232 TIGR00739 yajC preprotein tran 25.1 97 0.0021 20.4 2.9 24 64-92 37-60 (84)
233 PF02153 PDH: Prephenate dehyd 24.5 2.7E+02 0.0058 22.6 6.0 72 129-208 7-85 (258)
234 PLN02589 caffeoyl-CoA O-methyl 24.4 68 0.0015 26.1 2.5 75 126-200 97-188 (247)
235 PHA00520 packaging NTPase P4 24.4 2.4E+02 0.0051 23.7 5.4 33 114-146 210-246 (330)
236 PF08704 GCD14: tRNA methyltra 24.4 89 0.0019 25.4 3.1 74 132-205 66-149 (247)
237 PRK14902 16S rRNA methyltransf 23.8 1.3E+02 0.0028 26.8 4.4 16 185-200 362-377 (444)
238 PRK00045 hemA glutamyl-tRNA re 23.5 77 0.0017 28.1 2.9 26 45-70 90-115 (423)
239 TIGR02752 MenG_heptapren 2-hep 23.5 78 0.0017 25.0 2.7 33 170-202 112-151 (231)
240 smart00828 PKS_MT Methyltransf 23.1 73 0.0016 25.0 2.5 32 171-202 66-104 (224)
241 TIGR01934 MenG_MenH_UbiE ubiqu 23.0 1.9E+02 0.0041 22.4 4.8 33 170-202 104-143 (223)
242 PF03446 NAD_binding_2: NAD bi 22.9 2E+02 0.0044 21.3 4.7 86 130-224 23-116 (163)
243 PLN02396 hexaprenyldihydroxybe 22.9 68 0.0015 27.2 2.3 72 130-202 152-235 (322)
244 COG0081 RplA Ribosomal protein 22.5 52 0.0011 26.2 1.4 46 133-180 74-119 (228)
245 PRK05785 hypothetical protein; 22.4 2.7E+02 0.0058 22.1 5.6 74 126-205 69-150 (226)
246 PLN02490 MPBQ/MSBQ methyltrans 22.2 1.1E+02 0.0024 26.2 3.4 73 126-202 131-215 (340)
247 PF01596 Methyltransf_3: O-met 21.9 47 0.001 26.1 1.1 75 126-200 63-153 (205)
248 PRK08177 short chain dehydroge 21.8 1.8E+02 0.004 22.6 4.6 53 130-182 24-81 (225)
249 PRK08300 acetaldehyde dehydrog 21.7 97 0.0021 26.1 2.9 73 127-202 24-101 (302)
250 PRK07402 precorrin-6B methylas 21.6 1.6E+02 0.0034 22.6 4.0 18 185-202 125-142 (196)
251 COG0853 PanD Aspartate 1-decar 21.4 60 0.0013 23.0 1.4 30 45-74 58-87 (126)
252 PRK03659 glutathione-regulated 21.3 1.1E+02 0.0024 28.5 3.6 75 126-201 418-497 (601)
253 PLN02358 glyceraldehyde-3-phos 21.3 77 0.0017 27.2 2.3 32 171-202 94-126 (338)
254 smart00851 MGS MGS-like domain 21.3 1.4E+02 0.003 19.6 3.2 52 128-181 10-64 (90)
255 PF03447 NAD_binding_3: Homose 21.1 43 0.00094 23.3 0.7 31 172-202 59-90 (117)
256 COG0673 MviM Predicted dehydro 20.9 5E+02 0.011 21.7 8.5 110 132-248 30-146 (342)
257 PF01209 Ubie_methyltran: ubiE 20.5 51 0.0011 26.5 1.0 73 126-202 65-153 (233)
258 PRK10669 putative cation:proto 20.5 4.6E+02 0.01 24.2 7.4 55 128-183 437-492 (558)
259 PRK14178 bifunctional 5,10-met 20.3 4.9E+02 0.011 21.7 6.7 72 128-204 149-226 (279)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.4e-50 Score=330.51 Aligned_cols=272 Identities=28% Similarity=0.367 Sum_probs=239.6
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEE-e-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVA-I----- 74 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~----- 74 (280)
++|++.|.|+++||+|+++|+|+|++|++..+|..+. ..+|+++|||.+|+|+++|++|+.||+||||.. +
T Consensus 18 i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~C 94 (339)
T COG1064 18 IEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISC 94 (339)
T ss_pred EEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCC
Confidence 3689999999999999999999999999999999874 358999999999999999999999999999976 3
Q ss_pred -------------------ecCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 75 -------------------LNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 75 -------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
.++..+|+|+||+++|+.+++++|+++++++||.+.|++.|+|.+|.+.--
T Consensus 95 g~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G 174 (339)
T COG1064 95 GECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVVG 174 (339)
T ss_pred CCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcCCCCCCEEEEEC
Confidence 234578999999999999999999999999999999999999999966311
Q ss_pred ----------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCccccccccc
Q 048785 126 ----------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLA 193 (280)
Q Consensus 126 ----------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~ 193 (280)
+|+++|++|++++++ ++.++++++|++++++.++.+ .+.... .+|+++|+++...++..+++|+
T Consensus 175 ~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~----~~d~ii~tv~~~~~~~~l~~l~ 250 (339)
T COG1064 175 AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE----IADAIIDTVGPATLEPSLKALR 250 (339)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHh----hCcEEEECCChhhHHHHHHHHh
Confidence 999999999999965 889999999999999977433 122211 2999999999666999999999
Q ss_pred CCcEEEEeCCCc-hhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCC
Q 048785 194 ENGKVIDLTPTP-SAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHA 272 (280)
Q Consensus 194 ~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~ 272 (280)
++|+++.+|... .....++...+.++++++.++. ..++.+.++++++..+|+++|.+.+.++++++++||+.|.+++.
T Consensus 251 ~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~-~g~~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v 329 (339)
T COG1064 251 RGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSL-VGTRADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKV 329 (339)
T ss_pred cCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEe-cCCHHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCe
Confidence 999999999774 4445566777788999999977 46899999999999999999999779999999999999999999
Q ss_pred cCcEEEeC
Q 048785 273 TGKIILEP 280 (280)
Q Consensus 273 ~gkvvi~~ 280 (280)
.|+.||.+
T Consensus 330 ~gR~Vi~~ 337 (339)
T COG1064 330 RGRAVIDM 337 (339)
T ss_pred eeEEEecC
Confidence 99999864
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.7e-46 Score=313.62 Aligned_cols=278 Identities=33% Similarity=0.467 Sum_probs=231.5
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
++|+|.|.|+++||+||+++++||+.|.+..+|..+ ....+|+++|.|++|+|+++|++|+.+++||+|+........
T Consensus 17 ~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~--~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~ 94 (326)
T COG0604 17 VVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAP--PVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRD 94 (326)
T ss_pred EEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCC--CCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCC
Confidence 368899999999999999999999999999999732 123689999999999999999999999999999987411147
Q ss_pred CcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEe
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATC 138 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~ 138 (280)
|+|+||..+|++.++++|+++++++||+++++++|||++|....+ ||+++|+.+++++
T Consensus 95 G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~ 174 (326)
T COG0604 95 GGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVV 174 (326)
T ss_pred CcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEe
Confidence 999999999999999999999999999999999999999988544 9999997655555
Q ss_pred -cCCcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCc-hhhHHHHHh
Q 048785 139 -GARNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTP-SAMLTFAWQ 214 (280)
Q Consensus 139 -~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~ 214 (280)
++++.++++++|++++++|++.+ ....+.+.++++|+|||++|++.+..++++|+++|+++.+|... .....++..
T Consensus 175 ~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~ 254 (326)
T COG0604 175 SSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSGGPPVPLNLL 254 (326)
T ss_pred cCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCCCCccccCHH
Confidence 56778899999999999998876 23445677789999999999999999999999999999998766 333333444
Q ss_pred hhhccceeeEEEEEcCC-----HHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhc-CCCcCcEEEeC
Q 048785 215 KLTFSKKQLVPLLVIPK-----GENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGAD-GHATGKIILEP 280 (280)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvi~~ 280 (280)
.+..+.....+...... .+.+.++.+++++|++++.+..+||+++..++...+.. ++..||+|+++
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 255 PLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 44455666666554333 56788899999999999999999999996555554444 48889999975
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.3e-44 Score=274.11 Aligned_cols=274 Identities=28% Similarity=0.364 Sum_probs=241.8
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
|++.|+|+|.++|.+||..|+|+|..|..+.+|.+. +.+.|++||.|.+|+|+++|+.|+++++||||+... .+
T Consensus 25 ~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~---~~ 98 (336)
T KOG1197|consen 25 LEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLN---PF 98 (336)
T ss_pred EeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEecCCccccccccEEEEec---cc
Confidence 578999999999999999999999999999999984 347899999999999999999999999999999876 78
Q ss_pred CcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEe
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATC 138 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~ 138 (280)
|.|+|+..+|...++++|+.+++.+||++.+.++|||..+++..+ +++..|+++|+++
T Consensus 99 g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~a 178 (336)
T KOG1197|consen 99 GAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATA 178 (336)
T ss_pred hhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEe
Confidence 999999999999999999999999999999999999999987655 8888999999999
Q ss_pred cC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhh
Q 048785 139 GA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQK 215 (280)
Q Consensus 139 ~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~ 215 (280)
+. ++++.+++.|+++.|+++.++ ....+.++++|+|+++|.+|.+.+...+.+|++.|.+|.+|..++..-.+.+++
T Consensus 179 sTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ 258 (336)
T KOG1197|consen 179 STAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQ 258 (336)
T ss_pred ccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCCCCCeehhh
Confidence 75 899999999999999998877 445567889999999999999999999999999999999997777665566666
Q ss_pred hhccceeeEEEEEcC---CHH----HHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 216 LTFSKKQLVPLLVIP---KGE----NLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 216 ~~~~~~~~~~~~~~~---~~~----~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++-+.+++...++.+ .+. ...+++.++.+|.+++.|.++|||+++.+|+..++++.+.||+++.+
T Consensus 259 ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp 330 (336)
T KOG1197|consen 259 LSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLP 330 (336)
T ss_pred cChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeC
Confidence 666666655433322 222 34677888999999999999999999999999999999999999864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.4e-44 Score=282.79 Aligned_cols=275 Identities=22% Similarity=0.236 Sum_probs=225.5
Q ss_pred CCCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec---
Q 048785 1 HVHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN--- 76 (280)
Q Consensus 1 ~~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--- 76 (280)
++++|+|++ +|+||+|++.++|||++|++.+.......+-.+.|+++|||.+|+|.++|+.|+++|+||||+.-.+
T Consensus 18 i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c 97 (354)
T KOG0024|consen 18 IEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPC 97 (354)
T ss_pred EeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCcc
Confidence 467889986 9999999999999999999988766554333468999999999999999999999999999986311
Q ss_pred ----------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh---------
Q 048785 77 ----------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG--------- 125 (280)
Q Consensus 77 ----------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~--------- 125 (280)
...+|++++|++.++++|+|+|++++++++|++.. ++.+|+|.++ ++
T Consensus 98 ~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP-LsV~~HAcr~-~~vk~Gs~vLV 175 (354)
T KOG0024|consen 98 RDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP-LSVGVHACRR-AGVKKGSKVLV 175 (354)
T ss_pred ccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc-hhhhhhhhhh-cCcccCCeEEE
Confidence 24679999999999999999999999999999932 4599999944 33
Q ss_pred ------------hhhhCCC-EEEEEe-cCCcHHHHHhcCCCeeecCCCCC--c---cccc-CCCCCcccEEEECCCCCC-
Q 048785 126 ------------LAKLGNS-HVTATC-GARNIEFVKSLGADEVLDYKTPD--G---AALK-SPSGRKYDAVIHCARGIP- 184 (280)
Q Consensus 126 ------------la~~~G~-~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~--~---~~~~-~~~~~~~d~v~d~~g~~~- 184 (280)
.|+++|| +|+.++ .+.|++.++++|++.+.+..... . ...+ ..+...+|+.|||+|-..
T Consensus 176 ~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~ 255 (354)
T KOG0024|consen 176 LGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVT 255 (354)
T ss_pred ECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHH
Confidence 8899999 888888 56899999999999887654433 1 1222 233356999999999754
Q ss_pred cccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCe--eEeccceecchhHHH
Q 048785 185 WSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKI--KTLIDSKHLLSKAED 262 (280)
Q Consensus 185 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~--~~~~~~~~~~~~~~~ 262 (280)
++.++.+++.+|.+++.+... ....|+...+..++.++.+.++ ....+++.+++++++|++ ++++++.|++++..+
T Consensus 256 ~~aai~a~r~gGt~vlvg~g~-~~~~fpi~~v~~kE~~~~g~fr-y~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~e 333 (354)
T KOG0024|consen 256 IRAAIKATRSGGTVVLVGMGA-EEIQFPIIDVALKEVDLRGSFR-YCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADE 333 (354)
T ss_pred HHHHHHHhccCCEEEEeccCC-CccccChhhhhhheeeeeeeee-eccccHHHHHHHHHcCCcCchhheecccccchHHH
Confidence 899999999999988877443 3355666777889999999874 567799999999999997 579999999999999
Q ss_pred HHHHHhcCCC-cCcEEEe
Q 048785 263 AWAKGADGHA-TGKIILE 279 (280)
Q Consensus 263 a~~~~~~~~~-~gkvvi~ 279 (280)
||+.++.++. .-|+++.
T Consensus 334 Af~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 334 AFETLQHGEEGVIKVIIT 351 (354)
T ss_pred HHHHHHhCcCCceEEEEe
Confidence 9999998874 3477775
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-42 Score=273.91 Aligned_cols=272 Identities=26% Similarity=0.350 Sum_probs=226.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEE-Ee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVV-AI------ 74 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~------ 74 (280)
.+++.|+++++||+|+++|||||++|++...|..+. ..+|.++|||.+|+|+++|++|+.|++||+|- ++
T Consensus 27 ~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~ 103 (360)
T KOG0023|consen 27 FSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCL 103 (360)
T ss_pred eEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEecccc
Confidence 578899999999999999999999999999998863 58999999999999999999999999999983 32
Q ss_pred --------------------ecCC-----CCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----
Q 048785 75 --------------------LNHF-----SGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---- 125 (280)
Q Consensus 75 --------------------~~~~-----~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---- 125 (280)
.+.. ..|+||+|+++++.++++||+++..++||.+.|++.|+|.+|....-
T Consensus 104 ~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~~pG~ 183 (360)
T KOG0023|consen 104 SCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSGLGPGK 183 (360)
T ss_pred CccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcCCCCCc
Confidence 1112 34559999999999999999999999999999999999999954311
Q ss_pred ----------------hhhhCCCEEEEEecC--CcHHHHHhcCCCeeecCCC-CCc-ccccCCCCCcccEEEECCCCCCc
Q 048785 126 ----------------LAKLGNSHVTATCGA--RNIEFVKSLGADEVLDYKT-PDG-AALKSPSGRKYDAVIHCARGIPW 185 (280)
Q Consensus 126 ----------------la~~~G~~Vi~~~~~--~~~~~~~~~g~~~v~~~~~-~~~-~~~~~~~~~~~d~v~d~~g~~~~ 185 (280)
+|+++|.+|+++++. +|.+.++.+|++..++..+ .++ .....+.+.++|.+.+. ....+
T Consensus 184 ~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~ 262 (360)
T KOG0023|consen 184 WVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL-AEHAL 262 (360)
T ss_pred EEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeec-cccch
Confidence 999999999999964 4566667899999998774 332 22223333445555544 33458
Q ss_pred ccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHH
Q 048785 186 STFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWA 265 (280)
Q Consensus 186 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~ 265 (280)
+.++.+++.+|++|++|.+.. ...++...+.+++..+.++.. +++.+.++++++.++|.+++.+. ..+++++++||+
T Consensus 263 ~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~v-G~~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~e 339 (360)
T KOG0023|consen 263 EPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIV-GSRKETQEALDFVARGLIKSPIE-LVKLSEVNEAYE 339 (360)
T ss_pred HHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeecc-ccHHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHH
Confidence 899999999999999997776 666666777788888888774 68999999999999999999887 899999999999
Q ss_pred HHhcCCCcCcEEEeC
Q 048785 266 KGADGHATGKIILEP 280 (280)
Q Consensus 266 ~~~~~~~~gkvvi~~ 280 (280)
+|.+++...+.|+.+
T Consensus 340 rm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 340 RMEKGDVRYRFVVDV 354 (360)
T ss_pred HHHhcCeeEEEEEEc
Confidence 999999988988753
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.9e-41 Score=289.97 Aligned_cols=272 Identities=21% Similarity=0.274 Sum_probs=223.7
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH---- 77 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~---- 77 (280)
+++|.|.|+++||+||+.+++||++|+..+.|..+ ..+|.++|||++|+|+++|++++++++||+|++....
T Consensus 24 ~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~ 99 (371)
T cd08281 24 EEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGH 99 (371)
T ss_pred EEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCC
Confidence 57888999999999999999999999999888653 2568999999999999999999999999999863110
Q ss_pred -----------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHH
Q 048785 78 -----------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTA 116 (280)
Q Consensus 78 -----------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a 116 (280)
...|+|+||+.+|.+.++++|+++++++|++++++++||
T Consensus 100 c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta 179 (371)
T cd08281 100 CRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTG 179 (371)
T ss_pred CccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHH
Confidence 013799999999999999999999999999999999999
Q ss_pred HHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC-cc-cccCCCCC
Q 048785 117 LEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGR 171 (280)
Q Consensus 117 ~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~ 171 (280)
|+++...++ +|+.+|+ +|+++++ ++++++++++|+++++++++.+ .+ ....+.+
T Consensus 180 ~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~- 258 (371)
T cd08281 180 VGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGG- 258 (371)
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCC-
Confidence 999755433 8899999 7998885 5889999999999999887654 22 2233334
Q ss_pred cccEEEECCCCC-CcccccccccCCcEEEEeCCCch-hhHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHHCCCe
Q 048785 172 KYDAVIHCARGI-PWSTFEPNLAENGKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLKEGKI 247 (280)
Q Consensus 172 ~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~g~~ 247 (280)
++|++|||+|+. .+..++++++++|+++.+|.... ....+....+..++.++.+.... ...++++++++++++|++
T Consensus 259 g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i 338 (371)
T cd08281 259 GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRL 338 (371)
T ss_pred CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCC
Confidence 899999999974 58889999999999999985432 22344555666788888886542 135788999999999998
Q ss_pred e--EeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 248 K--TLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 248 ~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
+ ++++++|+|+|+++||+.+.+++..+|+++
T Consensus 339 ~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 339 PVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 6 468899999999999999999988888764
No 7
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=9.4e-41 Score=283.82 Aligned_cols=274 Identities=26% Similarity=0.308 Sum_probs=223.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
+++|.|.++++||+||+.++++|++|+..+.|.... +..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 15 ~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~ 92 (339)
T cd08239 15 REFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGA 92 (339)
T ss_pred EecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCC
Confidence 578999999999999999999999999988776431 123578999999999999999999999999998742
Q ss_pred -------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 76 -------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 76 -------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
+....|+|+||+.+|.+.++++|+++++++++++++++.|||+++....-
T Consensus 93 c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~ 172 (339)
T cd08239 93 CRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGA 172 (339)
T ss_pred ChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECC
Confidence 22346999999999999999999999999999999999999999854210
Q ss_pred ---------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCCc-ccccCCCCCcccEEEECCCCCC-cccccccc
Q 048785 126 ---------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVIHCARGIP-WSTFEPNL 192 (280)
Q Consensus 126 ---------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l 192 (280)
+|+.+|++ |+++++ +++.++++++|++.++++++... ...+.+.++++|++|||+|+.. +..+++++
T Consensus 173 G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l 252 (339)
T cd08239 173 GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAV 252 (339)
T ss_pred CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHh
Confidence 88999997 999885 47888999999999998865442 2223445668999999999876 57889999
Q ss_pred cCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee--EeccceecchhHHHHHHHHhcC
Q 048785 193 AENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK--TLIDSKHLLSKAEDAWAKGADG 270 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~--~~~~~~~~~~~~~~a~~~~~~~ 270 (280)
+++|+++.+|........ ....+..++.++.+... ...++++++++++++|+++ ++++++|+++++++||+.+.++
T Consensus 253 ~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~ 330 (339)
T cd08239 253 RPWGRLVLVGEGGELTIE-VSNDLIRKQRTLIGSWY-FSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQG 330 (339)
T ss_pred hcCCEEEEEcCCCCcccC-cHHHHHhCCCEEEEEec-CCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcC
Confidence 999999999854432211 12345567888887653 4567899999999999986 5788999999999999999887
Q ss_pred CCcCcEEEeC
Q 048785 271 HATGKIILEP 280 (280)
Q Consensus 271 ~~~gkvvi~~ 280 (280)
. .||+|+++
T Consensus 331 ~-~gKvvi~~ 339 (339)
T cd08239 331 E-SGKVVFVF 339 (339)
T ss_pred C-ceEEEEeC
Confidence 5 68999864
No 8
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-40 Score=282.53 Aligned_cols=271 Identities=15% Similarity=0.177 Sum_probs=214.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
+++|.| ++++||+||+.++|||++|+.++++...+.....+|.++|||++|+|+++ +++.|++||+|+...
T Consensus 19 ~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~ 95 (343)
T PRK09880 19 TEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGH 95 (343)
T ss_pred EecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcC
Confidence 577776 68899999999999999999987532211112357899999999999999 788999999998531
Q ss_pred ------------------c-----CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-------
Q 048785 76 ------------------N-----HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------- 125 (280)
Q Consensus 76 ------------------~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------- 125 (280)
+ ...+|+|+||+++|++.++++|+++++++++ +..++.+||+++.+...
T Consensus 96 c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~~~~~~~g~~Vl 174 (343)
T PRK09880 96 CKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAHQAGDLQGKRVF 174 (343)
T ss_pred ChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHHHhcCCCCCCEEE
Confidence 1 0236999999999999999999999987665 44455699999865321
Q ss_pred -------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC-Cccccc
Q 048785 126 -------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI-PWSTFE 189 (280)
Q Consensus 126 -------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~ 189 (280)
+|+.+|+ +|+++++ ++++++++++|+++++++++.+........ +++|++|||+|++ .+..++
T Consensus 175 V~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~-g~~D~vid~~G~~~~~~~~~ 253 (343)
T PRK09880 175 VSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEK-GYFDVSFEVSGHPSSINTCL 253 (343)
T ss_pred EECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccC-CCCCEEEECCCCHHHHHHHH
Confidence 8899999 7888885 589999999999999998765522222222 3699999999985 588999
Q ss_pred ccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHH
Q 048785 190 PNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKG 267 (280)
Q Consensus 190 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~ 267 (280)
++++++|+++.+|.... ...++...+..+++++.+... ..++++++++++++|++++ .++++|+++|+++||+.+
T Consensus 254 ~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~ 330 (343)
T PRK09880 254 EVTRAKGVMVQVGMGGA-PPEFPMMTLIVKEISLKGSFR--FTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFA 330 (343)
T ss_pred HHhhcCCEEEEEccCCC-CCccCHHHHHhCCcEEEEEee--ccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHH
Confidence 99999999999985432 223445556677888887654 3567899999999999975 778999999999999999
Q ss_pred hcCCCcCcEEEeC
Q 048785 268 ADGHATGKIILEP 280 (280)
Q Consensus 268 ~~~~~~gkvvi~~ 280 (280)
.++...||+++.+
T Consensus 331 ~~~~~~gKvvl~~ 343 (343)
T PRK09880 331 GDKTQAAKVQLVF 343 (343)
T ss_pred hcCCCceEEEEeC
Confidence 9888789999874
No 9
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.3e-40 Score=283.66 Aligned_cols=270 Identities=20% Similarity=0.230 Sum_probs=219.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEe-----e-
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI-----L- 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-----~- 75 (280)
.+++.|.|+++||+||+.++|||++|+....|.... ..+|.++|||++|+|+++|++++++++||+|+.. +
T Consensus 22 ~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~---~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg 98 (375)
T PLN02178 22 FHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF---SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQ 98 (375)
T ss_pred EeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC---CCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCC
Confidence 367788899999999999999999999998886531 2467899999999999999999999999999742 1
Q ss_pred --------------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh-----
Q 048785 76 --------------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA----- 124 (280)
Q Consensus 76 --------------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~----- 124 (280)
+....|+|+||+.+|++.++++|+++++++++++++++.|||+++....
T Consensus 99 ~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~ 178 (375)
T PLN02178 99 SCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKES 178 (375)
T ss_pred CChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCC
Confidence 1112689999999999999999999999999999999999999885431
Q ss_pred h-----------------hhhhCCCEEEEEec-CC-cHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC-C
Q 048785 125 G-----------------LAKLGNSHVTATCG-AR-NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI-P 184 (280)
Q Consensus 125 ~-----------------la~~~G~~Vi~~~~-~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~ 184 (280)
+ +|+.+|++|+++++ ++ +.+.++++|+++++++++.. .....+ + ++|++|||+|++ .
T Consensus 179 g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~-~v~~~~-~-~~D~vid~~G~~~~ 255 (375)
T PLN02178 179 GKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQ-KMKEAV-G-TMDFIIDTVSAEHA 255 (375)
T ss_pred CCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHH-HHHHhh-C-CCcEEEECCCcHHH
Confidence 1 88999999998885 33 46788899999999875431 122222 2 699999999987 5
Q ss_pred cccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHH
Q 048785 185 WSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAW 264 (280)
Q Consensus 185 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~ 264 (280)
+..++++++++|+++.+|.... ...++...+.+++.++.+... ...+++.++++++++|++++.+ ++|+|+++++||
T Consensus 256 ~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~ 332 (375)
T PLN02178 256 LLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQI-GGMKETQEMLEFCAKHKIVSDI-ELIKMSDINSAM 332 (375)
T ss_pred HHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCc-cCHHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHH
Confidence 7899999999999999985432 233444556667888877653 4567899999999999999877 579999999999
Q ss_pred HHHhcCCCcCcEEEeC
Q 048785 265 AKGADGHATGKIILEP 280 (280)
Q Consensus 265 ~~~~~~~~~gkvvi~~ 280 (280)
+.+.+++..||+++++
T Consensus 333 ~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 333 DRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHcCCCceEEEEEe
Confidence 9999998889999864
No 10
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.9e-40 Score=282.16 Aligned_cols=270 Identities=19% Similarity=0.236 Sum_probs=216.1
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
.+++.|.++++||+||+.++|||++|+..+.|..+. ..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 28 ~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg 104 (360)
T PLN02586 28 FHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF---TRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCK 104 (360)
T ss_pred EeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC---CCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCC
Confidence 357788899999999999999999999988876531 25688999999999999999999999999997421
Q ss_pred --------------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----
Q 048785 76 --------------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---- 125 (280)
Q Consensus 76 --------------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---- 125 (280)
+...+|+|+||+.+|.+.++++|+++++++++++++++.|||+++.....
T Consensus 105 ~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g 184 (360)
T PLN02586 105 SCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPG 184 (360)
T ss_pred CCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCC
Confidence 11136999999999999999999999999999999999999999854321
Q ss_pred -----------------hhhhCCCEEEEEec-CCc-HHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC-Cc
Q 048785 126 -----------------LAKLGNSHVTATCG-ARN-IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI-PW 185 (280)
Q Consensus 126 -----------------la~~~G~~Vi~~~~-~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~ 185 (280)
+|+.+|++|++++. +++ .+.++++|+++++++++.. .....+ + ++|++|||+|+. .+
T Consensus 185 ~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~-~~~~~~-~-~~D~vid~~g~~~~~ 261 (360)
T PLN02586 185 KHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPE-KMKAAI-G-TMDYIIDTVSAVHAL 261 (360)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHH-HHHhhc-C-CCCEEEECCCCHHHH
Confidence 88999999888774 444 4566789999999865532 122222 2 599999999975 58
Q ss_pred ccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHH
Q 048785 186 STFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWA 265 (280)
Q Consensus 186 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~ 265 (280)
..++++++++|+++.+|.... ...++...+..++..+.+.. ....++++++++++++|++++.+ ++|+|+|+++||+
T Consensus 262 ~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~ 338 (360)
T PLN02586 262 GPLLGLLKVNGKLITLGLPEK-PLELPIFPLVLGRKLVGGSD-IGGIKETQEMLDFCAKHNITADI-ELIRMDEINTAME 338 (360)
T ss_pred HHHHHHhcCCcEEEEeCCCCC-CCccCHHHHHhCCeEEEEcC-cCCHHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHH
Confidence 889999999999999985432 22333444455666666554 34567899999999999998766 5899999999999
Q ss_pred HHhcCCCcCcEEEeC
Q 048785 266 KGADGHATGKIILEP 280 (280)
Q Consensus 266 ~~~~~~~~gkvvi~~ 280 (280)
.+.+++..||+++++
T Consensus 339 ~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 339 RLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHcCCCcEEEEEEc
Confidence 999998889999874
No 11
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.5e-40 Score=278.60 Aligned_cols=272 Identities=24% Similarity=0.238 Sum_probs=221.7
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCC-CCCCCEEEEeecCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN-FKAGYNVVAILNHFSG 80 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~ 80 (280)
+++|.|.|+++||+||+.++++|++|+....|..+. ...+|.++|||++|+|+++|++++. +++||+|++..+ .+
T Consensus 21 ~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~--~~ 96 (324)
T cd08291 21 PEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG--SY 96 (324)
T ss_pred cccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC--CC
Confidence 578889999999999999999999999988887542 1246789999999999999999996 999999998642 14
Q ss_pred CcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEe
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATC 138 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~ 138 (280)
|+|++|+.+|++.++++|+++++++++++++.++|||.++. ... +|+.+|++|++++
T Consensus 97 g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~-~~~~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~ 175 (324)
T cd08291 97 GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLE-TAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIV 175 (324)
T ss_pred CcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHH-hhccCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEe
Confidence 99999999999999999999999999998888889986552 221 8899999999988
Q ss_pred c-CCcHHHHHhcCCCeeecCCCCCc--ccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhH-HHHHh
Q 048785 139 G-ARNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAML-TFAWQ 214 (280)
Q Consensus 139 ~-~~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~ 214 (280)
+ +++.+.++++|++++++++..++ ...+.+.++++|++|||+|+......+++++++|+++.+|..+.... .++..
T Consensus 176 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 255 (324)
T cd08291 176 RRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPV 255 (324)
T ss_pred CCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCCcccCCHH
Confidence 5 47889999999999999876552 23344566789999999999888888999999999999985432211 12233
Q ss_pred hhhccceeeEEEEEc-----CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 215 KLTFSKKQLVPLLVI-----PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 215 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
.+..++.++.+.... ...+.+++++++++ +.+++.++++|+|+++++||+.+.++...||+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 256 DLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 345566666665432 13567888999998 99999999999999999999999999999999873
No 12
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=6.4e-40 Score=276.87 Aligned_cols=265 Identities=21% Similarity=0.234 Sum_probs=217.7
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
++++|.|.|+++||+||+.+++||++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 17 ~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c 93 (329)
T TIGR02822 17 FVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTC 93 (329)
T ss_pred EEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcC
Confidence 3678999999999999999999999999998887542 13468999999999999999999999999997421
Q ss_pred --------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 76 --------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 76 --------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
+...+|+|+||+.+|...++++|+++++++++.+++.++|||+++.. ++
T Consensus 94 ~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~ 172 (329)
T TIGR02822 94 GVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLY 172 (329)
T ss_pred CCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEE
Confidence 11236999999999999999999999999999999999999999854 32
Q ss_pred -----------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-CCcccccccc
Q 048785 126 -----------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-IPWSTFEPNL 192 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l 192 (280)
+|+.+|++|+++++ ++++++++++|+++++++.+.. ..++|.++++.+. ..+..+++++
T Consensus 173 G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------~~~~d~~i~~~~~~~~~~~~~~~l 244 (329)
T TIGR02822 173 GFGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP--------PEPLDAAILFAPAGGLVPPALEAL 244 (329)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC--------cccceEEEECCCcHHHHHHHHHhh
Confidence 88899999998885 5889999999999998754221 2358999988875 3488999999
Q ss_pred cCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCC
Q 048785 193 AENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHA 272 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~ 272 (280)
+++|+++.+|........++...+.+++.++.+.. ...++++.++++++++|++++ ++++|+|+|+++||+.+.+++.
T Consensus 245 ~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~ 322 (329)
T TIGR02822 245 DRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVT-SNTRADAREFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRF 322 (329)
T ss_pred CCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEee-cCCHHHHHHHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCC
Confidence 99999999986432222233444556777777654 345678899999999999975 5789999999999999999999
Q ss_pred cCcEEEe
Q 048785 273 TGKIILE 279 (280)
Q Consensus 273 ~gkvvi~ 279 (280)
.||+|+.
T Consensus 323 ~Gkvvl~ 329 (329)
T TIGR02822 323 DGAAVLV 329 (329)
T ss_pred ceEEEeC
Confidence 9999873
No 13
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.1e-40 Score=281.61 Aligned_cols=274 Identities=20% Similarity=0.250 Sum_probs=222.6
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
++|+|.|+|+++||+||+.++++|++|+....|..+ ..+|.++|||++|+|+++|++++++++||+|++...
T Consensus 16 ~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg 91 (358)
T TIGR03451 16 LETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCG 91 (358)
T ss_pred EEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCC
Confidence 357899999999999999999999999999888653 256889999999999999999999999999986210
Q ss_pred ----------------------------C-----CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhh
Q 048785 77 ----------------------------H-----FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQS 123 (280)
Q Consensus 77 ----------------------------~-----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~ 123 (280)
. ...|+|+||+.+|.+.++++|+++++++++++++++.+||+++...
T Consensus 92 ~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~ 171 (358)
T TIGR03451 92 QCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNT 171 (358)
T ss_pred CChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhc
Confidence 0 1258999999999999999999999999999998888999887554
Q ss_pred hh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEE
Q 048785 124 AG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIH 178 (280)
Q Consensus 124 ~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d 178 (280)
.+ +|+.+|+ +|+++++ +++.++++++|+++++++++.+ ......+.++++|++||
T Consensus 172 ~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid 251 (358)
T TIGR03451 172 GGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVID 251 (358)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEE
Confidence 32 8899999 5988885 4889999999999999887655 22334456678999999
Q ss_pred CCCCC-CcccccccccCCcEEEEeCCCchh-hHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHHCCCeeE--ecc
Q 048785 179 CARGI-PWSTFEPNLAENGKVIDLTPTPSA-MLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLKEGKIKT--LID 252 (280)
Q Consensus 179 ~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~g~~~~--~~~ 252 (280)
|+|++ .+..++++++++|+++.+|..... ...++...+..++.++.+.... ...++++++++++++|++++ +++
T Consensus 252 ~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~ 331 (358)
T TIGR03451 252 AVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVT 331 (358)
T ss_pred CCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEE
Confidence 99974 588899999999999999865331 2334444555677777765432 24678999999999999964 688
Q ss_pred ceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 253 SKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 253 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
++|+++|+++||+.+.+++.. |+++.
T Consensus 332 ~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 332 ERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred EEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 999999999999999888765 77765
No 14
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=6.1e-41 Score=268.50 Aligned_cols=273 Identities=18% Similarity=0.222 Sum_probs=224.8
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
++|+.+++|++|||+||+.++|+|++|...++|..+. .+|.++|||.+|+|++||+.|+++++||+|+..+
T Consensus 17 i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~----~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG 92 (366)
T COG1062 17 IEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE----GFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECG 92 (366)
T ss_pred EEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC----CCceecccccccEEEEecCCccccCCCCEEEEcccCCCC
Confidence 3678899999999999999999999999999999873 5899999999999999999999999999997630
Q ss_pred ----------------------------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHH
Q 048785 76 ----------------------------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLT 115 (280)
Q Consensus 76 ----------------------------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~ 115 (280)
.+..-++|++|..+++.++++++++..++.++.+.|+..|
T Consensus 93 ~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~T 172 (366)
T COG1062 93 QCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTT 172 (366)
T ss_pred CCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeecc
Confidence 0112259999999999999999999999999999999999
Q ss_pred HHHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC--cccccCCCC
Q 048785 116 ALEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD--GAALKSPSG 170 (280)
Q Consensus 116 a~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~ 170 (280)
.+.+..+.++ =|+..|+ ++|+++- ++|++++++||+++++|.++.. .+.+....+
T Consensus 173 G~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~ 252 (366)
T COG1062 173 GIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTD 252 (366)
T ss_pred ChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcC
Confidence 9998877766 5667788 9999994 6999999999999999998763 233333455
Q ss_pred CcccEEEECCCCCC-cccccccccCCcEEEEeCCCc-hhhHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHHCCC
Q 048785 171 RKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTPTP-SAMLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLKEGK 246 (280)
Q Consensus 171 ~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~g~ 246 (280)
+++|++|||+|+.. +++++.++.++|+.+.+|... ....+...-++. .+..+.+.... ..+.++++++++..+|+
T Consensus 253 gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv-~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gk 331 (366)
T COG1062 253 GGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLV-TGRVWKGSAFGGARPRSDIPRLVDLYMAGK 331 (366)
T ss_pred CCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHee-ccceEEEEeecCCccccchhHHHHHHHcCC
Confidence 59999999999965 889999999999999998443 222222222222 23666666653 35789999999999999
Q ss_pred e--eEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 247 I--KTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 247 ~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
+ .++++++++|+|+++||+.|.+++.. |.||.
T Consensus 332 l~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 332 LPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred CchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 7 47999999999999999999999876 55544
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.8e-39 Score=276.24 Aligned_cols=270 Identities=18% Similarity=0.197 Sum_probs=217.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH---- 77 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~---- 77 (280)
+|+|.|.++++||+||+.++|||++|+..+.|.. .+|.++|||++|+|+++|++++++++||+|++....
T Consensus 28 ~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~------~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~ 101 (378)
T PLN02827 28 EEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA------LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGS 101 (378)
T ss_pred EEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC------CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCC
Confidence 5789999999999999999999999999877642 357899999999999999999999999999875210
Q ss_pred -----------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHH
Q 048785 78 -----------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTA 116 (280)
Q Consensus 78 -----------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a 116 (280)
...|+|+||+.+|++.++++|+++++++++++++++.++
T Consensus 102 C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a 181 (378)
T PLN02827 102 CRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 181 (378)
T ss_pred ChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhh
Confidence 013899999999999999999999999999998888888
Q ss_pred HHHHHhhhh---------------------hhhhCCC-EEEEEe-cCCcHHHHHhcCCCeeecCCCC--C-cccc-cCCC
Q 048785 117 LEALTQSAG---------------------LAKLGNS-HVTATC-GARNIEFVKSLGADEVLDYKTP--D-GAAL-KSPS 169 (280)
Q Consensus 117 ~~~l~~~~~---------------------la~~~G~-~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~--~-~~~~-~~~~ 169 (280)
|+++...++ +|+.+|+ .|++++ ++++.++++++|+++++++++. + ...+ +.+.
T Consensus 182 ~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~ 261 (378)
T PLN02827 182 LGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTG 261 (378)
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhC
Confidence 887654332 8889999 577877 4588999999999999988753 2 2222 2333
Q ss_pred CCcccEEEECCCCC-CcccccccccCC-cEEEEeCCCchhhHHHHH-hhhhccceeeEEEEEc--CCHHHHHHHHHHHHC
Q 048785 170 GRKYDAVIHCARGI-PWSTFEPNLAEN-GKVIDLTPTPSAMLTFAW-QKLTFSKKQLVPLLVI--PKGENLVFLVKLLKE 244 (280)
Q Consensus 170 ~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~ 244 (280)
+ ++|++|||+|.. .+..+++.++++ |+++.+|..... ..+.. ..+.+++.++.+.... .+..++.++++++++
T Consensus 262 ~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 339 (378)
T PLN02827 262 G-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMN 339 (378)
T ss_pred C-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHc
Confidence 3 899999999986 588999999998 999999865432 12211 3455678888876542 235678999999999
Q ss_pred CCeeE--eccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 245 GKIKT--LIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 245 g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
|++++ +++++|+|+++++|++.+.+++. .|+||.+
T Consensus 340 g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 340 KEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred CCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence 99987 88999999999999999998876 5888864
No 16
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.1e-38 Score=273.43 Aligned_cols=273 Identities=19% Similarity=0.207 Sum_probs=214.1
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH---- 77 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~---- 77 (280)
+++|.|+|+++||+||+.++|||++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|++....
T Consensus 17 ~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~ 93 (368)
T TIGR02818 17 EEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGE 93 (368)
T ss_pred EEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCC
Confidence 578889999999999999999999999998887542 2578999999999999999999999999999864210
Q ss_pred -----------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHH
Q 048785 78 -----------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTA 116 (280)
Q Consensus 78 -----------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a 116 (280)
...|+|+||+.+|.+.++++|+++++++++++++++.||
T Consensus 94 C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta 173 (368)
T TIGR02818 94 CKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTG 173 (368)
T ss_pred ChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHH
Confidence 013699999999999999999999999999999999999
Q ss_pred HHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC---cc-cccCCC
Q 048785 117 LEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD---GA-ALKSPS 169 (280)
Q Consensus 117 ~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~-~~~~~~ 169 (280)
|+++.+.++ +|+.+|+ +|+++++ +++++.++++|++.++++++.. .. ..+.+.
T Consensus 174 ~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~ 253 (368)
T TIGR02818 174 IGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITD 253 (368)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhC
Confidence 999855432 8899999 8999885 5889999999999999876422 12 223334
Q ss_pred CCcccEEEECCCCC-CcccccccccCC-cEEEEeCCCch-hhHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHHC
Q 048785 170 GRKYDAVIHCARGI-PWSTFEPNLAEN-GKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLKE 244 (280)
Q Consensus 170 ~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~ 244 (280)
+ ++|++|||+|++ .+..++++++++ |+++.+|.... ....+....+. .+..+.+.... ..+.++.++++++++
T Consensus 254 ~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 331 (368)
T TIGR02818 254 G-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMK 331 (368)
T ss_pred C-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHC
Confidence 3 899999999975 478889999886 99999985431 11211112222 22334443321 235678999999999
Q ss_pred CCee--EeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 245 GKIK--TLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 245 g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
|+++ ++++++|+|+++++||+.+.++.. .|+++++
T Consensus 332 g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 332 GEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 9875 578999999999999999987765 5998864
No 17
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.2e-38 Score=272.25 Aligned_cols=271 Identities=21% Similarity=0.197 Sum_probs=206.1
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC---
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH--- 77 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--- 77 (280)
++++|.|+|+++||+||+.++|||++|++.++|..+......+|.++|||++|+|+++|++ +.|++||+|++....
T Consensus 15 ~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg 93 (355)
T cd08230 15 VVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPG 93 (355)
T ss_pred EEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCC
Confidence 3578999999999999999999999999999887532112246789999999999999999 999999999864210
Q ss_pred ------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHh------h----
Q 048785 78 ------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQ------S---- 123 (280)
Q Consensus 78 ------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~------~---- 123 (280)
..+|+|+||+.+|.+.++++|++++ ++ +++..++.+++.++.. .
T Consensus 94 ~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~ 171 (355)
T cd08230 94 KCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTW 171 (355)
T ss_pred cChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhcccC
Confidence 1358999999999999999999999 43 3333343344433321 1
Q ss_pred hh-----------------hhhhCCCEEEEEec----CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC
Q 048785 124 AG-----------------LAKLGNSHVTATCG----ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG 182 (280)
Q Consensus 124 ~~-----------------la~~~G~~Vi~~~~----~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 182 (280)
.+ +|+.+|++|+++++ +++.++++++|++. +++.+...... ....++|++|||+|+
T Consensus 172 ~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~~--~~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAEV--KLVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhhh--hhcCCCCEEEECcCC
Confidence 11 88999999999885 36888999999986 45544332111 123579999999998
Q ss_pred C-CcccccccccCCcEEEEeCCCch-hhHHHH----HhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCC------eeEe
Q 048785 183 I-PWSTFEPNLAENGKVIDLTPTPS-AMLTFA----WQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGK------IKTL 250 (280)
Q Consensus 183 ~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~------~~~~ 250 (280)
+ .+..++++++++|+++.+|.... ....+. ...+.++++++.+.. ..+.++++++++++.++. +++.
T Consensus 249 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 327 (355)
T cd08230 249 PPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSV-NANKRHFEQAVEDLAQWKYRWPGVLERL 327 (355)
T ss_pred HHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEec-CCchhhHHHHHHHHHhcccccccchHHh
Confidence 5 47899999999999999985443 222222 345667888888865 345678899999999876 5677
Q ss_pred ccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 251 IDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 251 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++++|+++++++||+.+.++. .|+++++
T Consensus 328 i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 328 ITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred eeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 889999999999999887654 5998864
No 18
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.3e-38 Score=270.39 Aligned_cols=270 Identities=20% Similarity=0.287 Sum_probs=218.5
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
++++.|+++++||+||+.+++||++|+..+.|.... ..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 25 ~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~ 101 (357)
T PLN02514 25 YTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCG 101 (357)
T ss_pred EeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCC
Confidence 578899999999999999999999999988876531 24678999999999999999999999999997411
Q ss_pred --------------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----
Q 048785 76 --------------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---- 125 (280)
Q Consensus 76 --------------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---- 125 (280)
+....|+|+||+.+|.+.++++|+++++++++++++++.|||+++.....
T Consensus 102 ~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g 181 (357)
T PLN02514 102 ECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSG 181 (357)
T ss_pred CChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCC
Confidence 01135999999999999999999999999999999999999999855321
Q ss_pred -----------------hhhhCCCEEEEEecC-CcHHH-HHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC-Cc
Q 048785 126 -----------------LAKLGNSHVTATCGA-RNIEF-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI-PW 185 (280)
Q Consensus 126 -----------------la~~~G~~Vi~~~~~-~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~ 185 (280)
+|+.+|++|+++++. +++.. ++++|++.++++.+.. .....+ .++|++|||+|.. .+
T Consensus 182 ~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~~--~~~D~vid~~g~~~~~ 258 (357)
T PLN02514 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAA-EMQEAA--DSLDYIIDTVPVFHPL 258 (357)
T ss_pred CeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChH-HHHHhc--CCCcEEEECCCchHHH
Confidence 889999998888854 55544 4679998887654422 122222 3699999999964 58
Q ss_pred ccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHH
Q 048785 186 STFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWA 265 (280)
Q Consensus 186 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~ 265 (280)
+.++++++++|+++.+|.... ...+....+.+++.++.+... ...++++++++++++|++++.+ ++|+|+++++||+
T Consensus 259 ~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~ 335 (357)
T PLN02514 259 EPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFI-GSMKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFE 335 (357)
T ss_pred HHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEec-CCHHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHH
Confidence 889999999999999986543 233445556678888888663 4567899999999999998876 5899999999999
Q ss_pred HHhcCCCcCcEEEeC
Q 048785 266 KGADGHATGKIILEP 280 (280)
Q Consensus 266 ~~~~~~~~gkvvi~~ 280 (280)
.+.++...||+++.+
T Consensus 336 ~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 336 RLEKNDVRYRFVVDV 350 (357)
T ss_pred HHHcCCCceeEEEEc
Confidence 999998889999864
No 19
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.6e-38 Score=273.60 Aligned_cols=274 Identities=21% Similarity=0.253 Sum_probs=217.6
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH---- 77 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~---- 77 (280)
+|+|.|.|+++||+||+.++|||++|+..+.|..+. ...+|.++|||++|+|+++|++++.+++||+|++....
T Consensus 26 ~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~ 103 (381)
T PLN02740 26 EEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGD 103 (381)
T ss_pred EEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCC
Confidence 578899999999999999999999999998887531 12568999999999999999999999999999864210
Q ss_pred --------------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhH
Q 048785 78 --------------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAG 113 (280)
Q Consensus 78 --------------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 113 (280)
...|+|+||+.+|.+.++++|+++++++++++++++
T Consensus 104 C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~ 183 (381)
T PLN02740 104 CRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGV 183 (381)
T ss_pred ChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccc
Confidence 015899999999999999999999999999999999
Q ss_pred HHHHHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC---cc-ccc
Q 048785 114 LTALEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD---GA-ALK 166 (280)
Q Consensus 114 ~~a~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~-~~~ 166 (280)
.|||+++...++ +|+.+|+ +|+++++ +++.+.++++|+++++++++.. .+ ...
T Consensus 184 ~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~ 263 (381)
T PLN02740 184 STGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIRE 263 (381)
T ss_pred hhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHH
Confidence 999998755433 8889999 7998885 5899999999999999876532 12 223
Q ss_pred CCCCCcccEEEECCCCC-CcccccccccCC-cEEEEeCCCchh-hHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHH
Q 048785 167 SPSGRKYDAVIHCARGI-PWSTFEPNLAEN-GKVIDLTPTPSA-MLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKL 241 (280)
Q Consensus 167 ~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 241 (280)
.+.+ ++|++|||+|+. .+..++++++++ |+++.+|..... ...+....+ +++.++.+.... ....++++++++
T Consensus 264 ~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~ 341 (381)
T PLN02740 264 MTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITGSVFGDFKGKSQLPNLAKQ 341 (381)
T ss_pred HhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEEEecCCCCcHHHHHHHHHH
Confidence 3334 899999999985 588899999996 999999855432 112222212 356677765532 235678999999
Q ss_pred HHCCCee--EeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 242 LKEGKIK--TLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 242 i~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
+.+|+++ ++++++|+|+|+++||+.+.++.. .|++|+.
T Consensus 342 ~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 342 CMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred HHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 9999885 478899999999999999988866 4998863
No 20
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=4.4e-38 Score=269.95 Aligned_cols=272 Identities=19% Similarity=0.214 Sum_probs=214.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH---- 77 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~---- 77 (280)
+++|.|.|+++||+||+.+++||++|+....|..+. ..+|.++|||++|+|+++|++++++++||+|++....
T Consensus 18 ~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~ 94 (368)
T cd08300 18 EEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGE 94 (368)
T ss_pred EEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCC
Confidence 578899999999999999999999999998887542 2578999999999999999999999999999864100
Q ss_pred -----------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHH
Q 048785 78 -----------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTA 116 (280)
Q Consensus 78 -----------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a 116 (280)
...|+|+||+.++.+.++++|+++++++++++++++.||
T Consensus 95 C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta 174 (368)
T cd08300 95 CKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTG 174 (368)
T ss_pred ChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhh
Confidence 013689999999999999999999999999999999999
Q ss_pred HHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC---cc-cccCCC
Q 048785 117 LEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD---GA-ALKSPS 169 (280)
Q Consensus 117 ~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~-~~~~~~ 169 (280)
|+++.+.++ +|+.+|+ +|+++++ +++.+.++++|+++++++++.+ .. ..+.+.
T Consensus 175 ~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~ 254 (368)
T cd08300 175 YGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTD 254 (368)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhC
Confidence 998755432 8899999 7999985 4788999999999999887642 12 223334
Q ss_pred CCcccEEEECCCCC-CcccccccccCC-cEEEEeCCCch-hhHHHHHhhhhccceeeEEEEE--cCCHHHHHHHHHHHHC
Q 048785 170 GRKYDAVIHCARGI-PWSTFEPNLAEN-GKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLV--IPKGENLVFLVKLLKE 244 (280)
Q Consensus 170 ~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~ 244 (280)
+ ++|++|||+|+. .+..++++++++ |+++.+|.... .........+. .+..+.+... +...++++++++++.+
T Consensus 255 ~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 332 (368)
T cd08300 255 G-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMK 332 (368)
T ss_pred C-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHc
Confidence 3 899999999975 588899999886 99999985431 11111111111 2223344332 2356789999999999
Q ss_pred CCeeE--eccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 245 GKIKT--LIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 245 g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
|++++ +++++|+|+++++||+.+.+++. .|++++
T Consensus 333 g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 333 GKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred CCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 99874 68899999999999999987765 588875
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=9.5e-38 Score=266.11 Aligned_cols=273 Identities=19% Similarity=0.221 Sum_probs=218.0
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEe------
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI------ 74 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------ 74 (280)
++|+|.|.++++||+||+.++++|++|+....+...+ ...+|.++|||++|+|+++|++++.+ +||+|++.
T Consensus 13 ~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg 89 (349)
T TIGR03201 13 KTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCG 89 (349)
T ss_pred EEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCC
Confidence 3688999999999999999999999999876443321 12568899999999999999999887 99999862
Q ss_pred ------------------ecCCCCCcceeEEeecccccccCCC------CCChhhhcccchhHHHHHHHHHhhhh-----
Q 048785 75 ------------------LNHFSGGGLAEFAMVKESLTASRPL------EVSAAEGAGLPLAGLTALEALTQSAG----- 125 (280)
Q Consensus 75 ------------------~~~~~~g~~~~~~~v~~~~~~~~p~------~~~~~~aa~~~~~~~~a~~~l~~~~~----- 125 (280)
.+....|+|+||+.+|.+.++++|+ +++++++++++.++.+||+++.. .+
T Consensus 90 ~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~-~~~~~g~ 168 (349)
T TIGR03201 90 ECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ-AGLKKGD 168 (349)
T ss_pred CChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHh-cCCCCCC
Confidence 1112469999999999999999998 89999999999999999999854 22
Q ss_pred ----------------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCC----cc-cccCCCCCccc----EEEEC
Q 048785 126 ----------------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPD----GA-ALKSPSGRKYD----AVIHC 179 (280)
Q Consensus 126 ----------------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~----~~-~~~~~~~~~~d----~v~d~ 179 (280)
+|+.+|++|+++++ +++.++++++|+++++++.+.+ .+ ..+.+.++++| .+|||
T Consensus 169 ~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~ 248 (349)
T TIGR03201 169 LVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFEC 248 (349)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEEC
Confidence 88899999999885 5889999999999999876542 11 22345566776 89999
Q ss_pred CCCCC-cccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceec
Q 048785 180 ARGIP-WSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHL 256 (280)
Q Consensus 180 ~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~ 256 (280)
+|+.. ++.++++++++|+++.+|..... ..+....+..++.++.+.+ ....++++++++++++|++++ ++ ++|+
T Consensus 249 ~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~i~~g~i~~~~~i-~~~~ 325 (349)
T TIGR03201 249 SGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNW-GCPPDRYPAALDLVLDGKIQLGPFV-ERRP 325 (349)
T ss_pred CCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEe-cCCHHHHHHHHHHHHcCCCCcccce-EEec
Confidence 99865 66789999999999999865432 2333344455566666654 235678999999999999864 45 4799
Q ss_pred chhHHHHHHHHhcCCCcCcEEEeC
Q 048785 257 LSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 257 ~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
|+++++||+.+.+++..+|+++++
T Consensus 326 l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 326 LDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred HHHHHHHHHHHHcCCccceEEecC
Confidence 999999999999999889999864
No 22
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=5.7e-38 Score=262.78 Aligned_cols=263 Identities=19% Similarity=0.218 Sum_probs=201.5
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecC-hhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC--
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLN-AFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH-- 77 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~-~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-- 77 (280)
++++|.|.|+++||+||+.+++|| ++|+..+.|..+......+|.++|||++|+|+++|+++ .+++||||+.....
T Consensus 15 ~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~ 93 (308)
T TIGR01202 15 LREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVPGSNCY 93 (308)
T ss_pred EEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEeCcccc
Confidence 357889999999999999999996 69999888876432112578999999999999999999 59999999863210
Q ss_pred ----CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-------------------hhhhCCCEE
Q 048785 78 ----FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG-------------------LAKLGNSHV 134 (280)
Q Consensus 78 ----~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~-------------------la~~~G~~V 134 (280)
...|+|+||+.+|++.++++|++++++. ++++ .+.|||+++.+... +|+.+|+++
T Consensus 94 ~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~~~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~ 171 (308)
T TIGR01202 94 EDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAGAEVKVLPDLIVGHGTLGRLLARLTKAAGGSP 171 (308)
T ss_pred ccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHhcccCCCcEEEECCCHHHHHHHHHHHHcCCce
Confidence 1259999999999999999999999865 4444 35799999965211 889999965
Q ss_pred EE-EecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEeCCCchhhHHH
Q 048785 135 TA-TCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTPTPSAMLTF 211 (280)
Q Consensus 135 i~-~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~ 211 (280)
++ ++.. ++++.+.. ..++|+++. .+.++|++|||+|+.. ++.++++++++|+++.+|.... ...+
T Consensus 172 v~~~~~~~~rl~~a~~---~~~i~~~~~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~ 239 (308)
T TIGR01202 172 PAVWETNPRRRDGATG---YEVLDPEKD--------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTE-PVNF 239 (308)
T ss_pred EEEeCCCHHHHHhhhh---ccccChhhc--------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCC-Cccc
Confidence 54 4433 45544433 345554321 2457999999999864 7899999999999999985432 2334
Q ss_pred HHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 212 AWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
+...+..+++++.+.. ....++++++++++++|++++ .++++|+|+|+++||+.+.++...+|++++
T Consensus 240 ~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 240 DFVPAFMKEARLRIAA-EWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ccchhhhcceEEEEec-ccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 4455566777776654 335678999999999999864 789999999999999998877777899874
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-37 Score=265.76 Aligned_cols=273 Identities=20% Similarity=0.218 Sum_probs=214.0
Q ss_pred CCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 2 VHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 2 ~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
+|+|.|.+ +++||+||+.++++|++|+..+.+... ..+|.++|||++|+|+++|++++++++||+|++..
T Consensus 15 ~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~ 90 (347)
T PRK10309 15 AESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA----HYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCF 90 (347)
T ss_pred EECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC----CCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCC
Confidence 57888887 589999999999999999975432211 13578999999999999999999999999998742
Q ss_pred -------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 76 -------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 76 -------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
+....|+|+||+.+|.+.++++|+++++++++++. ...++|+++.. ..
T Consensus 91 ~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~~~-~~~~~g~~vlV~G 168 (347)
T PRK10309 91 TCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL-AQGCEGKNVIIIG 168 (347)
T ss_pred CCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHHHh-cCCCCCCEEEEEC
Confidence 11236999999999999999999999999998873 33457777632 21
Q ss_pred ----------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCC-cccccCCCCCccc-EEEECCCCC-Ccccccc
Q 048785 126 ----------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYD-AVIHCARGI-PWSTFEP 190 (280)
Q Consensus 126 ----------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d-~v~d~~g~~-~~~~~~~ 190 (280)
+|+.+|++ |+++++ +++.+.++++|+++++++++.. ......+.+.++| ++|||+|+. .+..+++
T Consensus 169 ~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~ 248 (347)
T PRK10309 169 AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIE 248 (347)
T ss_pred CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHH
Confidence 88999995 677775 4788899999999999876544 2233445566788 999999985 5889999
Q ss_pred cccCCcEEEEeCCCchh-hH-HHHHhhhhccceeeEEEEEcC----CHHHHHHHHHHHHCCCe--eEeccceecchhHHH
Q 048785 191 NLAENGKVIDLTPTPSA-ML-TFAWQKLTFSKKQLVPLLVIP----KGENLVFLVKLLKEGKI--KTLIDSKHLLSKAED 262 (280)
Q Consensus 191 ~l~~~g~~v~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~g~~--~~~~~~~~~~~~~~~ 262 (280)
+++++|+++.+|..... .. ...+..+..++.++.+..... ..++++++++++++|++ ++.++++|+|+++++
T Consensus 249 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~ 328 (347)
T PRK10309 249 IAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQ 328 (347)
T ss_pred HhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHH
Confidence 99999999999854322 11 112234566778888765421 24778999999999998 478899999999999
Q ss_pred HHHHHhcCCCcCcEEEeC
Q 048785 263 AWAKGADGHATGKIILEP 280 (280)
Q Consensus 263 a~~~~~~~~~~gkvvi~~ 280 (280)
||+.+.++...||+++++
T Consensus 329 A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 329 AVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHHHhcCCcceEEEEeC
Confidence 999999998889999875
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=7.4e-38 Score=268.26 Aligned_cols=271 Identities=18% Similarity=0.199 Sum_probs=215.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH---- 77 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~---- 77 (280)
+++|.|.++++||+||+.++++|++|+..+.|..+ ..+|.++|||++|+|+++|++++++++||+|++....
T Consensus 18 ~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~ 93 (365)
T cd08277 18 EEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGE 93 (365)
T ss_pred EEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCC
Confidence 57888999999999999999999999999888654 2578899999999999999999999999999874110
Q ss_pred ----------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHH
Q 048785 78 ----------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTAL 117 (280)
Q Consensus 78 ----------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~ 117 (280)
...|+|+||+.++.+.++++|++++++++++++++++|||
T Consensus 94 c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~ 173 (365)
T cd08277 94 CSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGY 173 (365)
T ss_pred CchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHH
Confidence 0248899999999999999999999999999999999999
Q ss_pred HHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC---cccc-cCCCC
Q 048785 118 EALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD---GAAL-KSPSG 170 (280)
Q Consensus 118 ~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~~~-~~~~~ 170 (280)
+++....+ +|+.+|+ +|+++++ +++.+.++++|+++++++++.. ...+ ..+.
T Consensus 174 ~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~- 252 (365)
T cd08277 174 GAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTG- 252 (365)
T ss_pred HHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhC-
Confidence 98754432 8899999 7999886 4789999999999999876532 2222 2333
Q ss_pred CcccEEEECCCCC-CcccccccccCC-cEEEEeCCCchhhHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHHCCC
Q 048785 171 RKYDAVIHCARGI-PWSTFEPNLAEN-GKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLKEGK 246 (280)
Q Consensus 171 ~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~g~ 246 (280)
+++|++|||+|+. .+..++++++++ |+++.+|........+....+.. +.++.+.... ..+.+++++++++.+++
T Consensus 253 ~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 331 (365)
T cd08277 253 GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKK 331 (365)
T ss_pred CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCC
Confidence 6899999999964 478899999875 99999986542222222223332 5666665432 23567899999999997
Q ss_pred ee--EeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 247 IK--TLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 247 ~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
++ ++++++|+++|+++||+.+.+++ ..|++++
T Consensus 332 ~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 332 FDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred cChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence 54 67889999999999999998887 4588763
No 25
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1e-37 Score=267.93 Aligned_cols=273 Identities=20% Similarity=0.215 Sum_probs=216.9
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC---
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH--- 77 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--- 77 (280)
++++|.|+|+++||+||+.+++||++|+..+.|..+ ...+|.++|||++|+|+++|++++++++||+|++....
T Consensus 17 l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~ 93 (369)
T cd08301 17 IEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECK 93 (369)
T ss_pred EEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCC
Confidence 367889999999999999999999999998888754 23578999999999999999999999999999874100
Q ss_pred -------------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHH
Q 048785 78 -------------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGL 114 (280)
Q Consensus 78 -------------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 114 (280)
...|+|+||+.+|...++++|++++++++++++++++
T Consensus 94 ~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ 173 (369)
T cd08301 94 ECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVS 173 (369)
T ss_pred CCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhh
Confidence 0237899999999999999999999999999999989
Q ss_pred HHHHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC---cccccCC
Q 048785 115 TALEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD---GAALKSP 168 (280)
Q Consensus 115 ~a~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 168 (280)
|||+++....+ +|+.+|+ +|+++++ +++.++++++|++.++++++.. ...+...
T Consensus 174 ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~ 253 (369)
T cd08301 174 TGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEM 253 (369)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHH
Confidence 99998765433 8889999 8999985 5889999999999999876532 1222222
Q ss_pred CCCcccEEEECCCCCC-cccccccccCC-cEEEEeCCCch-hhHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHH
Q 048785 169 SGRKYDAVIHCARGIP-WSTFEPNLAEN-GKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLK 243 (280)
Q Consensus 169 ~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~ 243 (280)
.++++|++|||+|+.. +..++++++++ |+++.+|.... ....+....+ +++.++.+.... ..+++++++++++.
T Consensus 254 ~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 332 (369)
T cd08301 254 TGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYM 332 (369)
T ss_pred hCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecCCCChHHHHHHHHHHHH
Confidence 2337999999999764 77889999996 99999986442 1222222222 356777776432 23567899999999
Q ss_pred CCCee--EeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 244 EGKIK--TLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 244 ~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
+|+++ +.++++|+|+++++||+.+.+++.. |+++
T Consensus 333 ~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 333 KKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred cCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 99875 4678999999999999999988764 8876
No 26
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.6e-37 Score=267.35 Aligned_cols=273 Identities=17% Similarity=0.139 Sum_probs=203.2
Q ss_pred CCCCCCCCCC-------CCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEE
Q 048785 1 HVHVPVPTPR-------KDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVA 73 (280)
Q Consensus 1 ~~~~~~~~~~-------~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 73 (280)
++|+|.|.|+ ++||+|||.++|||++|+.++.|..+ ..+|.++|||++|+|+++|++|+++++||||++
T Consensus 16 ~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~ 91 (393)
T TIGR02819 16 VQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEVIEKGRDVEFIKIGDIVSV 91 (393)
T ss_pred EEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEEEEEcCccccccCCCEEEE
Confidence 3578888764 68999999999999999999887643 256899999999999999999999999999976
Q ss_pred ee------------------------------cC----CCCCcceeEEeeccc--ccccCCCCCCh----hhhcccchhH
Q 048785 74 IL------------------------------NH----FSGGGLAEFAMVKES--LTASRPLEVSA----AEGAGLPLAG 113 (280)
Q Consensus 74 ~~------------------------------~~----~~~g~~~~~~~v~~~--~~~~~p~~~~~----~~aa~~~~~~ 113 (280)
.. +. ...|+|+||+.+|.. .++++|++++. .+++++...+
T Consensus 92 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~ 171 (393)
T TIGR02819 92 PFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIF 171 (393)
T ss_pred ecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHH
Confidence 21 10 125899999999964 69999988653 3567777788
Q ss_pred HHHHHHHHhhhh---------------------hhhhCCCEEEEE-ec-CCcHHHHHhcCCCeeecCCCCC-cc-cccCC
Q 048785 114 LTALEALTQSAG---------------------LAKLGNSHVTAT-CG-ARNIEFVKSLGADEVLDYKTPD-GA-ALKSP 168 (280)
Q Consensus 114 ~~a~~~l~~~~~---------------------la~~~G~~Vi~~-~~-~~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~ 168 (280)
.+||+++.. .+ +|+.+|++++.+ ++ +++.++++++|++.+...++.+ .. ..+.+
T Consensus 172 ~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~ 250 (393)
T TIGR02819 172 PTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQIL 250 (393)
T ss_pred HHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHc
Confidence 899998853 22 888999965444 44 4689999999997543333323 22 33345
Q ss_pred CCCcccEEEECCCCC---------------CcccccccccCCcEEEEeCCCc-hhh-----------HHHHHhhhhccce
Q 048785 169 SGRKYDAVIHCARGI---------------PWSTFEPNLAENGKVIDLTPTP-SAM-----------LTFAWQKLTFSKK 221 (280)
Q Consensus 169 ~~~~~d~v~d~~g~~---------------~~~~~~~~l~~~g~~v~~g~~~-~~~-----------~~~~~~~~~~~~~ 221 (280)
.++++|++|||+|++ .++.++++++++|+++.+|... ... .++.....+.++.
T Consensus 251 ~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 330 (393)
T TIGR02819 251 GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSH 330 (393)
T ss_pred CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCc
Confidence 567899999999986 5889999999999999998642 111 1222333444555
Q ss_pred eeEEEEEcCCHHHHHHHHHHHHCCCeeE--ecc-ceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 222 QLVPLLVIPKGENLVFLVKLLKEGKIKT--LID-SKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++.+.. ....+...++++++++|++++ +++ ++|+|+++++||+.+.++.. .|+++++
T Consensus 331 ~i~g~~-~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~Kvvi~~ 390 (393)
T TIGR02819 331 SFHTGQ-TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-KKFVIDP 390 (393)
T ss_pred eEEecc-CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-eEEEEeC
Confidence 555532 222344578999999999864 566 78999999999999987754 7999864
No 27
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-37 Score=263.36 Aligned_cols=269 Identities=22% Similarity=0.240 Sum_probs=211.4
Q ss_pred CCCCCC-CCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccc--cceEEEEEeCCCCCCCCCCCEEEEeecCCC
Q 048785 3 HVPVPT-PRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPAT--DVAGEIIEVGSEVKNFKAGYNVVAILNHFS 79 (280)
Q Consensus 3 ~~~~~~-~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 79 (280)
+++.|. ++++|||||+.++++||.|...+.+.... ...|+++|+ |++|+|..+|++++.+++||+|+++
T Consensus 34 ~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~---~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~----- 105 (348)
T PLN03154 34 KIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS---YLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI----- 105 (348)
T ss_pred ccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC---CCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec-----
Confidence 356663 58999999999999999988754432221 135788997 8899999999999999999999864
Q ss_pred CCcceeEEeecccc--c--ccCCCCCChh-hhcccchhHHHHHHHHHhhhh----------------------hhhhCCC
Q 048785 80 GGGLAEFAMVKESL--T--ASRPLEVSAA-EGAGLPLAGLTALEALTQSAG----------------------LAKLGNS 132 (280)
Q Consensus 80 ~g~~~~~~~v~~~~--~--~~~p~~~~~~-~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~ 132 (280)
|+|+||..++... + +++|++++++ ++|+++++++|||+++...++ +|+.+|+
T Consensus 106 -~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~ 184 (348)
T PLN03154 106 -TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC 184 (348)
T ss_pred -CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC
Confidence 5799999998753 5 4458999986 688899999999999965433 8899999
Q ss_pred EEEEEecC-CcHHHHH-hcCCCeeecCCCC-C-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhh
Q 048785 133 HVTATCGA-RNIEFVK-SLGADEVLDYKTP-D-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAM 208 (280)
Q Consensus 133 ~Vi~~~~~-~~~~~~~-~~g~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~ 208 (280)
+|++++++ ++.+.++ ++|+++++++++. . ...+....++++|++|||+|+..+..++++++++|+++.+|......
T Consensus 185 ~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~ 264 (348)
T PLN03154 185 YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNS 264 (348)
T ss_pred EEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCC
Confidence 99998865 7888886 7999999998753 3 22222223458999999999988899999999999999998543221
Q ss_pred H-----HHHHhhhhccceeeEEEEEcC----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 209 L-----TFAWQKLTFSKKQLVPLLVIP----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 209 ~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
. .+....+..+++++.++.... ..+.++++++++++|++++.+..+|+|+++++|++.+.+++..||+|++
T Consensus 265 ~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~ 344 (348)
T PLN03154 265 LSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIR 344 (348)
T ss_pred CCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEE
Confidence 1 112334556777777765321 2356788999999999999888899999999999999999999999997
Q ss_pred C
Q 048785 280 P 280 (280)
Q Consensus 280 ~ 280 (280)
+
T Consensus 345 ~ 345 (348)
T PLN03154 345 V 345 (348)
T ss_pred e
Confidence 4
No 28
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=5.3e-37 Score=260.48 Aligned_cols=264 Identities=16% Similarity=0.158 Sum_probs=200.6
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCC-CCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec---
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI-LPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN--- 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--- 76 (280)
++|+|.|. +++||+|||.++|||++|+.++.|...+. ....+|.++|||++|+|+++|.+ .|++||+|+....
T Consensus 16 ~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~ 92 (341)
T cd08237 16 VTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPV 92 (341)
T ss_pred EeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCc
Confidence 36788885 99999999999999999999998875321 11257899999999999998875 6999999986421
Q ss_pred ------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh----h---------
Q 048785 77 ------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA----G--------- 125 (280)
Q Consensus 77 ------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~----~--------- 125 (280)
....|+|+||+.+|++.++++|+++++++||++ ..++++|+++.... +
T Consensus 93 ~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G 171 (341)
T cd08237 93 EKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWG 171 (341)
T ss_pred hhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEEC
Confidence 123599999999999999999999999887755 36668888885421 1
Q ss_pred ----------hhhh-CC-CEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC----Ccccc
Q 048785 126 ----------LAKL-GN-SHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI----PWSTF 188 (280)
Q Consensus 126 ----------la~~-~G-~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----~~~~~ 188 (280)
+++. +| ++|+++++ ++|++++++++++..++ + . ....++|++|||+|+. .+..+
T Consensus 172 ~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~--~----~---~~~~g~d~viD~~G~~~~~~~~~~~ 242 (341)
T cd08237 172 DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID--D----I---PEDLAVDHAFECVGGRGSQSAINQI 242 (341)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh--h----h---hhccCCcEEEECCCCCccHHHHHHH
Confidence 5664 55 48988885 47888888776654332 1 0 1123599999999963 37889
Q ss_pred cccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCC-----CeeEeccceecc---hhH
Q 048785 189 EPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEG-----KIKTLIDSKHLL---SKA 260 (280)
Q Consensus 189 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g-----~~~~~~~~~~~~---~~~ 260 (280)
+++++++|+++.+|.... ...+....+..+++++.+... ...++++++++++.++ .++++++++|++ +++
T Consensus 243 ~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~ 320 (341)
T cd08237 243 IDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSR-STREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDI 320 (341)
T ss_pred HHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEecc-cCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHH
Confidence 999999999999985432 233444556678888887653 4567899999999999 577889999998 577
Q ss_pred HHHHHHHhcCCCcCcEEEeC
Q 048785 261 EDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 261 ~~a~~~~~~~~~~gkvvi~~ 280 (280)
+++|+.+.++ ..||+||++
T Consensus 321 ~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 321 HRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred HHHHHHHhhc-CcceEEEEe
Confidence 7777776655 678999864
No 29
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=7.4e-37 Score=258.42 Aligned_cols=263 Identities=21% Similarity=0.229 Sum_probs=209.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
+|+|.|+|+++||+|||.++++|+.++. |.... ...|.++|+|++|+|+++|+ .+++||+|+++ +
T Consensus 22 ~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~---~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------~ 86 (325)
T TIGR02825 22 KTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRL---KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------P 86 (325)
T ss_pred EeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcC---CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe------c
Confidence 5789999999999999999999996553 43321 13467999999999999874 59999999975 3
Q ss_pred cceeEEeecccccccC----CCCCChhhh-cccchhHHHHHHHHHhhhh----------------------hhhhCCCEE
Q 048785 82 GLAEFAMVKESLTASR----PLEVSAAEG-AGLPLAGLTALEALTQSAG----------------------LAKLGNSHV 134 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~----p~~~~~~~a-a~~~~~~~~a~~~l~~~~~----------------------la~~~G~~V 134 (280)
+|++|+.++.+.+.++ |++++++++ ++++++++|||+++...++ +|+..|++|
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~V 166 (325)
T TIGR02825 87 GWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKV 166 (325)
T ss_pred CceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEE
Confidence 6999999998887766 899999987 6789999999999866543 889999999
Q ss_pred EEEecC-CcHHHHHhcCCCeeecCCCC-C-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCch-----
Q 048785 135 TATCGA-RNIEFVKSLGADEVLDYKTP-D-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPS----- 206 (280)
Q Consensus 135 i~~~~~-~~~~~~~~~g~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~----- 206 (280)
++++++ ++.++++++|+++++++++. . ...+....++++|++|||+|+..+..++++++++|+++.+|....
T Consensus 167 i~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~ 246 (325)
T TIGR02825 167 VGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTG 246 (325)
T ss_pred EEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCC
Confidence 998864 78899999999999998764 3 223333445689999999999888999999999999999885321
Q ss_pred -hhHHHHHhhhhccceeeEEEEEcC-----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 207 -AMLTFAWQKLTFSKKQLVPLLVIP-----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
.........+.+++.++.++.... ..+.++++++++++|++++.+..+|+++++++|++.+.+++..||+|++
T Consensus 247 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 247 PLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred CCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 111112334555667776654311 2457889999999999998777889999999999999999999999974
No 30
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.9e-36 Score=258.05 Aligned_cols=274 Identities=20% Similarity=0.218 Sum_probs=203.5
Q ss_pred CCCCCCCCC-CCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 2 VHVPVPTPR-KDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 2 ~~~~~~~~~-~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
+|+|.|+|. ++||+|||.|+|||+.|++.............+|.++|||++|+|+++|++++.+++||+|+++.
T Consensus 26 ~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 100 (345)
T cd08293 26 EECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN----- 100 (345)
T ss_pred EeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC-----
Confidence 578888874 99999999999999999754322111001124678999999999999999999999999998752
Q ss_pred CcceeEEeecccccccCCCCCChhh----hcccchhHHHHHHHHHhhh-------h-----------------hhhhCCC
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAE----GAGLPLAGLTALEALTQSA-------G-----------------LAKLGNS 132 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~----aa~~~~~~~~a~~~l~~~~-------~-----------------la~~~G~ 132 (280)
++|+||+++|.+.++++|+++++.+ +++++.+++|||+++.+.+ + +|+++|+
T Consensus 101 ~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~ 180 (345)
T cd08293 101 WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGC 180 (345)
T ss_pred CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCC
Confidence 6799999999999999999864332 4566778899999985432 2 8899999
Q ss_pred -EEEEEecC-CcHHHHHh-cCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCch--
Q 048785 133 -HVTATCGA-RNIEFVKS-LGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPS-- 206 (280)
Q Consensus 133 -~Vi~~~~~-~~~~~~~~-~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~-- 206 (280)
+|++++++ ++.+.+++ +|+++++++++.+ ...+....++++|++|||+|+..+..++++++++|+++.+|....
T Consensus 181 ~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~ 260 (345)
T cd08293 181 SRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYN 260 (345)
T ss_pred CEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeeccc
Confidence 89999965 77788765 9999999987655 222222234689999999999888899999999999999873211
Q ss_pred ------hhHHHHHhhh-hccceeeEEEEEcC----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCc
Q 048785 207 ------AMLTFAWQKL-TFSKKQLVPLLVIP----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGK 275 (280)
Q Consensus 207 ------~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk 275 (280)
.........+ ..++.....+.... ..+.++++++++++|++++....+++++++++|++.+.+++..||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gk 340 (345)
T cd08293 261 KDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGK 340 (345)
T ss_pred CccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCe
Confidence 0000000111 11222222221111 235577888999999998776667799999999999999998999
Q ss_pred EEEeC
Q 048785 276 IILEP 280 (280)
Q Consensus 276 vvi~~ 280 (280)
+|+++
T Consensus 341 vvl~~ 345 (345)
T cd08293 341 QIVKV 345 (345)
T ss_pred EEEEC
Confidence 99875
No 31
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.3e-36 Score=259.57 Aligned_cols=275 Identities=24% Similarity=0.282 Sum_probs=219.3
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCC--------CCCCCCCccccccceEEEEEeCCCCCCCCCCCEEE
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARP--------ILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVV 72 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 72 (280)
++++|.|+++++||+||+.++++|++|+....+.... .....+|.++|||++|+|+++|++++.+++||+|+
T Consensus 14 ~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~ 93 (351)
T cd08233 14 VEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVV 93 (351)
T ss_pred EEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEE
Confidence 3578899999999999999999999999876543110 00123678999999999999999999999999998
Q ss_pred Eeec------------------------C-CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh--
Q 048785 73 AILN------------------------H-FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG-- 125 (280)
Q Consensus 73 ~~~~------------------------~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~-- 125 (280)
+... . ..+|+|++|+.++...++++|+++++++++++ ..+.+||+++ ..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~ 171 (351)
T cd08233 94 VEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFK 171 (351)
T ss_pred ECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCC
Confidence 6311 0 12699999999999999999999999998776 5667999998 4332
Q ss_pred -------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCC
Q 048785 126 -------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARG 182 (280)
Q Consensus 126 -------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~ 182 (280)
+|+.+|+ +|+++++ +++.++++++|++.++++++.. ......+.++++|++|||+|+
T Consensus 172 ~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~ 251 (351)
T cd08233 172 PGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGV 251 (351)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCC
Confidence 8889999 8888885 4788888899999999987765 223344566679999999986
Q ss_pred -CCcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee--Eeccceecchh
Q 048785 183 -IPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK--TLIDSKHLLSK 259 (280)
Q Consensus 183 -~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~--~~~~~~~~~~~ 259 (280)
..+..++++++++|+++.+|... ....+....+..++.++.+... ...++++++++++++|+++ +.++++|+++|
T Consensus 252 ~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e 329 (351)
T cd08233 252 QATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSIC-YTREDFEEVIDLLASGKIDAEPLITSRIPLED 329 (351)
T ss_pred HHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEec-cCcchHHHHHHHHHcCCCChHHheEEEecHHH
Confidence 45888999999999999998654 2234445556677888877653 3568899999999999995 56788999999
Q ss_pred H-HHHHHHHhcCCCc-CcEEEe
Q 048785 260 A-EDAWAKGADGHAT-GKIILE 279 (280)
Q Consensus 260 ~-~~a~~~~~~~~~~-gkvvi~ 279 (280)
+ ++||+.+.+++.. +|++|.
T Consensus 330 ~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 330 IVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHHHHHHHHHhCCCCceEEEeC
Confidence 6 7999999999874 899873
No 32
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2.9e-36 Score=254.74 Aligned_cols=272 Identities=21% Similarity=0.259 Sum_probs=221.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
+++|.|.+.++||+||+.++++|+.|+....|..+. ...+|.++|||++|+|+++|++++.+++||+|++.. ..|
T Consensus 19 ~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~---~~g 93 (324)
T cd08292 19 GEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAP---VHG 93 (324)
T ss_pred eecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecc---CCC
Confidence 578889999999999999999999999988887642 124578999999999999999999999999999863 378
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
+|++|+.++...++++|+++++++++++++.+++||+++.. ++ +|+.+|++++++++
T Consensus 94 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~ 172 (324)
T cd08292 94 TWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVR 172 (324)
T ss_pred cceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec
Confidence 99999999999999999999999999999888899998843 22 88999999988885
Q ss_pred -CCcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhh
Q 048785 140 -ARNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKL 216 (280)
Q Consensus 140 -~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 216 (280)
+++.+.++++|+++++++++.. ......+.++++|++|||+|+.....++++++++|+++.+|........+.....
T Consensus 173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 252 (324)
T cd08292 173 RDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDL 252 (324)
T ss_pred CHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHH
Confidence 4777888889999998887654 2233456677899999999998888999999999999999854322222222233
Q ss_pred hccceeeEEEEEcC---------CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 217 TFSKKQLVPLLVIP---------KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 217 ~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
..++..+.+..... ..+.+..+++++.+|.+++.+.+.|+++++++|++.+.++...+|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 253 IFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred hhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 44666666554311 1356788999999999986678899999999999999988888898874
No 33
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.1e-36 Score=235.99 Aligned_cols=275 Identities=23% Similarity=0.264 Sum_probs=228.7
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
++++++|.....+|+||..|+.|||+|+..++|.++. -..+|.+-|+|++|+|+.+|+++++|++||+|+-... ..
T Consensus 37 l~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpv--rP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a--~l 112 (354)
T KOG0025|consen 37 LKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPV--RPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA--NL 112 (354)
T ss_pred eecccCCCCCCCceeeeeeecCCChHHhhhhccccCC--CCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCC--CC
Confidence 3567888877888999999999999999999999974 2367899999999999999999999999999987643 67
Q ss_pred CcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEe
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATC 138 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~ 138 (280)
|+|+++.+.+++.++++++.++.+.||++....+|||..|.+..+ +|+++|.+-|.++
T Consensus 113 GtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV 192 (354)
T KOG0025|consen 113 GTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV 192 (354)
T ss_pred ccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe
Confidence 999999999999999999999999999999999999999987655 9999999999888
Q ss_pred cC-CcH----HHHHhcCCCeeecCCCCCcccc--cCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHH
Q 048785 139 GA-RNI----EFVKSLGADEVLDYKTPDGAAL--KSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTF 211 (280)
Q Consensus 139 ~~-~~~----~~~~~~g~~~v~~~~~~~~~~~--~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~ 211 (280)
++ .+. +.++++||++|+...+.....+ .......+.+.|||+|+.....+.+.|..||..+++|..+..+..+
T Consensus 193 RdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkqPv~~ 272 (354)
T KOG0025|consen 193 RDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQPVTV 272 (354)
T ss_pred ecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccCCCccc
Confidence 65 344 3446799999996544331111 1234456899999999999999999999999999999988888888
Q ss_pred HHhhhhccceeeEEEEEcC----------CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCC-CcCcEEEe
Q 048785 212 AWQKLTFSKKQLVPLLVIP----------KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGH-ATGKIILE 279 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~ 279 (280)
+...+.|+.+.+.|+++.. ..+.+.++.+|+..|+++.+.....+|++.+.|++...+.- ..||.++.
T Consensus 273 ~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 273 PTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred ccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEE
Confidence 8899999999999987721 12567889999999999988877889999989888655433 33455554
No 34
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.8e-36 Score=258.49 Aligned_cols=275 Identities=20% Similarity=0.263 Sum_probs=221.5
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCC------CCCCCEEEEe
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN------FKAGYNVVAI 74 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~ 74 (280)
++++|.|.++++||+||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++. +++||+|++.
T Consensus 15 ~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~ 91 (361)
T cd08231 15 IREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWS 91 (361)
T ss_pred EEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEc
Confidence 3578899999999999999999999999998887641 357789999999999999999986 9999999876
Q ss_pred ec-------------------------------CCCCCcceeEEeeccc-ccccCCCCCChhhhcccchhHHHHHHHHHh
Q 048785 75 LN-------------------------------HFSGGGLAEFAMVKES-LTASRPLEVSAAEGAGLPLAGLTALEALTQ 122 (280)
Q Consensus 75 ~~-------------------------------~~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~ 122 (280)
.. ....|+|++|+.++++ .++++|++++++++++++++++|||+++..
T Consensus 92 ~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~ 171 (361)
T cd08231 92 VGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDR 171 (361)
T ss_pred ccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHh
Confidence 21 0135899999999986 799999999999999988999999999865
Q ss_pred hhh---------------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCCc-----ccccCCCCCccc
Q 048785 123 SAG---------------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPDG-----AALKSPSGRKYD 174 (280)
Q Consensus 123 ~~~---------------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~-----~~~~~~~~~~~d 174 (280)
... +|+.+|+ +|++++++ ++.++++++|++.++++++... .....+.++++|
T Consensus 172 ~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d 251 (361)
T cd08231 172 AGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGAD 251 (361)
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCc
Confidence 432 8889999 99998864 7888889999999988765431 233456677899
Q ss_pred EEEECCCCC-CcccccccccCCcEEEEeCCCch-hhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCC--C--ee
Q 048785 175 AVIHCARGI-PWSTFEPNLAENGKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEG--K--IK 248 (280)
Q Consensus 175 ~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g--~--~~ 248 (280)
++|||+|+. .+..++++++++|+++.+|.... ....+....+..++..+.+... ...++++++++++.++ + ++
T Consensus 252 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 330 (361)
T cd08231 252 VVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN-YDPSHLYRAVRFLERTQDRFPFA 330 (361)
T ss_pred EEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEccc-CCchhHHHHHHHHHhccCcCCch
Confidence 999999874 47889999999999999985432 2233334445667777776653 3566788899999887 3 45
Q ss_pred EeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 249 TLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 249 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++++++|+++++++||+.+.++.. +|++|++
T Consensus 331 ~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 331 ELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred hheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 677889999999999999988774 7999875
No 35
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.5e-36 Score=257.15 Aligned_cols=274 Identities=27% Similarity=0.315 Sum_probs=210.5
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCc-cccccceEEEEEeCCCCCCCCCCCEEEEe------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPY-IPATDVAGEIIEVGSEVKNFKAGYNVVAI------ 74 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------ 74 (280)
++.+.|.++++||+||+.++|||++|++.++|..+.. ..|. ++|||++|+|+++| .++.+++||||+..
T Consensus 16 ~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~---~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg 91 (350)
T COG1063 16 EEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV---PPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCG 91 (350)
T ss_pred ccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC---CCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCC
Confidence 4555666889999999999999999999999876421 3334 99999999999999 77889999999873
Q ss_pred ------------ec------C-----CCCCcceeEEeeccccccc-CCCCCChhhhcccchhHHHHHHHHHhhhh-----
Q 048785 75 ------------LN------H-----FSGGGLAEFAMVKESLTAS-RPLEVSAAEGAGLPLAGLTALEALTQSAG----- 125 (280)
Q Consensus 75 ------------~~------~-----~~~g~~~~~~~v~~~~~~~-~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----- 125 (280)
+. . ..+|+|+||+.+|.+.+++ +|+++ +.+++++.-.+.+++++......
T Consensus 92 ~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~ 170 (350)
T COG1063 92 HCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGG 170 (350)
T ss_pred CChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCC
Confidence 10 0 1469999999999755555 58887 55666665555688666322221
Q ss_pred ----------------hhhhCCC-EEEEEec-CCcHHHHHh-cCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCC
Q 048785 126 ----------------LAKLGNS-HVTATCG-ARNIEFVKS-LGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIP 184 (280)
Q Consensus 126 ----------------la~~~G~-~Vi~~~~-~~~~~~~~~-~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~ 184 (280)
+++.+|+ +||+++. ++|++++++ .|++.+++..... ......+.+.++|++|||+|...
T Consensus 171 ~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~ 250 (350)
T COG1063 171 TVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPP 250 (350)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHH
Confidence 8889998 8888885 589999988 6666666554433 23445667789999999999754
Q ss_pred -cccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHH
Q 048785 185 -WSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAE 261 (280)
Q Consensus 185 -~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~ 261 (280)
+..++++++++|+++.+|........+....+..+++++.+........+++.+++++++|++.+ ++++.+++++++
T Consensus 251 ~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~ 330 (350)
T COG1063 251 ALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAA 330 (350)
T ss_pred HHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHH
Confidence 88999999999999999865443224556677788999998754356778999999999999864 668899999999
Q ss_pred HHHHHHhcCCC-cCcEEEeC
Q 048785 262 DAWAKGADGHA-TGKIILEP 280 (280)
Q Consensus 262 ~a~~~~~~~~~-~gkvvi~~ 280 (280)
+||+.+.+... .-|+++++
T Consensus 331 ~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 331 EAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HHHHHHHhcCCCeEEEEecC
Confidence 99999997554 55888864
No 36
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-37 Score=243.05 Aligned_cols=275 Identities=17% Similarity=0.189 Sum_probs=222.7
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEe------
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI------ 74 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------ 74 (280)
+||+.+++|+.+||+||+.++++|++|...++|..+ ...||.++|||.+|+|+++|+.|+.+++||+|+..
T Consensus 22 IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~---~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~Cg 98 (375)
T KOG0022|consen 22 IEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP---EGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCG 98 (375)
T ss_pred EEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc---cccCceEecccceeEEEEecCCccccCCCCEEeeccccCCC
Confidence 478899999999999999999999999999999864 34789999999999999999999999999999863
Q ss_pred ----------------------------------------ecCCCCCcceeEEeecccccccCCCCCChhhhcccchhHH
Q 048785 75 ----------------------------------------LNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGL 114 (280)
Q Consensus 75 ----------------------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 114 (280)
+....-.+|+||.+++...++++++....+.++.+.+...
T Consensus 99 eCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvs 178 (375)
T KOG0022|consen 99 ECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVS 178 (375)
T ss_pred CcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeecccc
Confidence 0011224899999999999999999999999999999999
Q ss_pred HHHHHHHhhhh---------------------hhhhCCC-EEEEEe-cCCcHHHHHhcCCCeeecCCCCC---cccccCC
Q 048785 115 TALEALTQSAG---------------------LAKLGNS-HVTATC-GARNIEFVKSLGADEVLDYKTPD---GAALKSP 168 (280)
Q Consensus 115 ~a~~~l~~~~~---------------------la~~~G~-~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 168 (280)
|.|.|..+.++ -||+.|| ++|+++ .+++.+.++++|+++.+|+.+.. .+.+...
T Consensus 179 TG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~Em 258 (375)
T KOG0022|consen 179 TGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEM 258 (375)
T ss_pred ccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHH
Confidence 99999888776 6677888 999999 67999999999999999998544 2222333
Q ss_pred CCCcccEEEECCCCCC-cccccccccCC-cEEEEeCCCch-hhHHHHHhhhhccceeeEEEEE--cCCHHHHHHHHHHHH
Q 048785 169 SGRKYDAVIHCARGIP-WSTFEPNLAEN-GKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLV--IPKGENLVFLVKLLK 243 (280)
Q Consensus 169 ~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~ 243 (280)
.+.++|+-|||+|+.. ++.++.+...+ |.-+.+|.... ...+....++ +.+..+.+... +..+.+++.+++...
T Consensus 259 TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l-~~GR~~~Gs~FGG~K~~~~iP~lV~~y~ 337 (375)
T KOG0022|consen 259 TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQL-VTGRTWKGSAFGGFKSKSDIPKLVKDYM 337 (375)
T ss_pred hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhh-ccccEEEEEecccccchhhhhHHHHHHH
Confidence 4588999999999965 77888888888 88888874332 2222222222 23555555444 357889999999988
Q ss_pred CCCe--eEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 244 EGKI--KTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 244 ~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++++ +..|+|++||+++++||+.|.+++.. +.|+.+
T Consensus 338 ~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 338 KKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred hCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 8876 57999999999999999999988876 666653
No 37
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=3.1e-36 Score=261.65 Aligned_cols=278 Identities=20% Similarity=0.245 Sum_probs=209.1
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhH-hccCCCCCC---CCCCccccccceEEEEEeCCCCC-CCCCCCEEEEee
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIK-KGVARPILP---RKFPYIPATDVAGEIIEVGSEVK-NFKAGYNVVAIL 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~-~g~~~~~~~---~~~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~ 75 (280)
++|+|.|.++++||+||+.++|||++|+..+ .|...+..+ ..+|.++|||++|+|+++|++++ .+++||+|++..
T Consensus 16 ~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~ 95 (410)
T cd08238 16 LEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQP 95 (410)
T ss_pred EEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcC
Confidence 3678999999999999999999999999976 454211000 14688999999999999999998 599999998742
Q ss_pred -------------cCCCCCcceeEEeeccc----ccccCCCCCChhhhccc-chhH-HHHHHHHH--------hhhh---
Q 048785 76 -------------NHFSGGGLAEFAMVKES----LTASRPLEVSAAEGAGL-PLAG-LTALEALT--------QSAG--- 125 (280)
Q Consensus 76 -------------~~~~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~-~~~~-~~a~~~l~--------~~~~--- 125 (280)
+....|+|+||+.+|.+ .++++|+++++++++.+ +.+. .+++.++. +.++
T Consensus 96 ~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~ 175 (410)
T cd08238 96 ALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKP 175 (410)
T ss_pred CcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCC
Confidence 11236999999999987 58999999999998866 4221 23343321 1111
Q ss_pred -------------------hhhhCCC---EEEEEec-CCcHHHHHhc--------CCC-eeecCCC-CC--cccccCCCC
Q 048785 126 -------------------LAKLGNS---HVTATCG-ARNIEFVKSL--------GAD-EVLDYKT-PD--GAALKSPSG 170 (280)
Q Consensus 126 -------------------la~~~G~---~Vi~~~~-~~~~~~~~~~--------g~~-~v~~~~~-~~--~~~~~~~~~ 170 (280)
+|+.+|+ +|+++++ +++++.++++ |++ .++++++ .+ ......+.+
T Consensus 176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g 255 (410)
T cd08238 176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGG 255 (410)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCC
Confidence 7787653 7998886 4788999887 666 5677654 22 222334566
Q ss_pred CcccEEEECCCC-CCcccccccccCCcEEEEeCCC-c-hhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCe
Q 048785 171 RKYDAVIHCARG-IPWSTFEPNLAENGKVIDLTPT-P-SAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKI 247 (280)
Q Consensus 171 ~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~ 247 (280)
+++|++|||+|+ ..+..++++++++|+++.++.. . .....++...+..++.++.+.. ....++++++++++++|++
T Consensus 256 ~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~~li~~g~i 334 (410)
T cd08238 256 QGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTS-GGNTDDMKEAIDLMAAGKL 334 (410)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeC-CCCHHHHHHHHHHHHcCCC
Confidence 789999999986 4588899999999988766422 1 1123455556777888888865 3467789999999999999
Q ss_pred eE--eccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 248 KT--LIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 248 ~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++ +++++|+|+++++||+.+. ++..||+++.+
T Consensus 335 ~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 335 NPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred chhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence 86 7899999999999999998 77789999864
No 38
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.1e-35 Score=252.16 Aligned_cols=276 Identities=28% Similarity=0.369 Sum_probs=222.2
Q ss_pred CCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCC-----------------CCCCCCCccccccceEEEEEeCCCCCCC
Q 048785 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARP-----------------ILPRKFPYIPATDVAGEIIEVGSEVKNF 65 (280)
Q Consensus 3 ~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~-----------------~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 65 (280)
+++.|.+.+++|+||+.++++|++|+.+..|..+. .....+|.++|||++|+|+++|++++.+
T Consensus 20 ~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 99 (350)
T cd08274 20 DVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTA 99 (350)
T ss_pred cCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCC
Confidence 35667789999999999999999999988775431 0123567899999999999999999999
Q ss_pred CCCCEEEEe----------------ecCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----
Q 048785 66 KAGYNVVAI----------------LNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---- 125 (280)
Q Consensus 66 ~~Gd~V~~~----------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---- 125 (280)
++||+|++. .+....|++++|+.++.+.++++|+++++.+++++++++.|||+++ ...+
T Consensus 100 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g 178 (350)
T cd08274 100 RIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAG 178 (350)
T ss_pred CCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCC
Confidence 999999874 2222358999999999999999999999999999999999999998 3322
Q ss_pred ------------------hhhhCCCEEEEEecCCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCccc
Q 048785 126 ------------------LAKLGNSHVTATCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWST 187 (280)
Q Consensus 126 ------------------la~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 187 (280)
+|+.+|++|++++++++.+.++++|++.+++.+.........+.++++|++|||+|+..+..
T Consensus 179 ~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~ 258 (350)
T cd08274 179 ETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGPLFPD 258 (350)
T ss_pred CEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHHHHH
Confidence 88899999999887668888889998766655443322244456778999999999988899
Q ss_pred ccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHH
Q 048785 188 FEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKG 267 (280)
Q Consensus 188 ~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~ 267 (280)
++++++++|+++.+|........++...+..++..+.+... ...+.+.++++++.++++++.+.+.|+++++++|++.+
T Consensus 259 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~ 337 (350)
T cd08274 259 LLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTL-GTREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEF 337 (350)
T ss_pred HHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeec-CCHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHH
Confidence 99999999999998754322123334444556667766553 46788999999999999988888899999999999999
Q ss_pred hcCCCcCcEEEeC
Q 048785 268 ADGHATGKIILEP 280 (280)
Q Consensus 268 ~~~~~~gkvvi~~ 280 (280)
.++...+|+++.+
T Consensus 338 ~~~~~~~kvvi~~ 350 (350)
T cd08274 338 LEKRHVGKLVLVP 350 (350)
T ss_pred hcCCCceEEEEeC
Confidence 9888889999875
No 39
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.1e-35 Score=252.51 Aligned_cols=268 Identities=24% Similarity=0.260 Sum_probs=209.7
Q ss_pred CCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccc--eEEEEEeCCCCCCCCCCCEEEEeecCCCCCc
Q 048785 5 PVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDV--AGEIIEVGSEVKNFKAGYNVVAILNHFSGGG 82 (280)
Q Consensus 5 ~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~ 82 (280)
++|+|+++||||||+|++|||.|++...|.... ....|+++|++. .|.+..+|+.++++++||+|+++ |+
T Consensus 31 ~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~------g~ 102 (338)
T cd08295 31 KVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF------TG 102 (338)
T ss_pred CCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec------CC
Confidence 348899999999999999999999988885431 114577888754 45665678888899999999865 58
Q ss_pred ceeEEeecc-cccccCC-CCCChh-hhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEE
Q 048785 83 LAEFAMVKE-SLTASRP-LEVSAA-EGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTAT 137 (280)
Q Consensus 83 ~~~~~~v~~-~~~~~~p-~~~~~~-~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~ 137 (280)
|+||+++|. ..++++| +++++. ++++++++++|||+++....+ +|+.+|++|+++
T Consensus 103 ~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~ 182 (338)
T cd08295 103 WEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGS 182 (338)
T ss_pred ceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE
Confidence 999999999 7999995 678876 788999999999999965432 889999999998
Q ss_pred ec-CCcHHHHHh-cCCCeeecCCCC-C-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhH----
Q 048785 138 CG-ARNIEFVKS-LGADEVLDYKTP-D-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAML---- 209 (280)
Q Consensus 138 ~~-~~~~~~~~~-~g~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~---- 209 (280)
++ +++.+++++ +|+++++++++. + ...+....++++|++||++|+..+..++++++++|+++.+|.......
T Consensus 183 ~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~ 262 (338)
T cd08295 183 AGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPE 262 (338)
T ss_pred eCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCC
Confidence 85 478888887 999999987543 3 222222334689999999999888999999999999999874332110
Q ss_pred -HHHHhhhhccceeeEEEEEcCC----HHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 210 -TFAWQKLTFSKKQLVPLLVIPK----GENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
......+.+++.++.++..... .+.++++++++.+|++++.+...|+++++++|++.+.+++..||+|+++
T Consensus 263 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 263 GVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred CccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 1122445566667766443221 3457889999999999987777899999999999999999899999874
No 40
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.7e-35 Score=246.31 Aligned_cols=276 Identities=39% Similarity=0.535 Sum_probs=217.0
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCC-CCCCCccccccceEE---EEEeC-CCCCCCCCCCEEEEeec
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPIL-PRKFPYIPATDVAGE---IIEVG-SEVKNFKAGYNVVAILN 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V~~~~~ 76 (280)
++.++|.|.+++++|++.++++||.|+.+..|...+.. ...+|.+.++++.|. +...| ..+..+..||.+....
T Consensus 23 ~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~- 101 (347)
T KOG1198|consen 23 EEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVAFL- 101 (347)
T ss_pred ecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEeecc-
Confidence 57899999999999999999999999999999886532 114665555555554 44444 3334567777666654
Q ss_pred CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh------h----------------------hhh
Q 048785 77 HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA------G----------------------LAK 128 (280)
Q Consensus 77 ~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~------~----------------------la~ 128 (280)
..|+|+||+++|...++++|+++++++||++|.+++|||.++.... + ||+
T Consensus 102 --~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk 179 (347)
T KOG1198|consen 102 --SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAK 179 (347)
T ss_pred --CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999888 4 999
Q ss_pred hCC-CEEEEEecCCcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCc-
Q 048785 129 LGN-SHVTATCGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTP- 205 (280)
Q Consensus 129 ~~G-~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~- 205 (280)
+.| ++|+++++.++.++++++|+++++||++++ .+++....+++||+||||+|+........++...|+...++...
T Consensus 180 ~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~ 259 (347)
T KOG1198|consen 180 HAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGD 259 (347)
T ss_pred hcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccc
Confidence 999 588888899999999999999999999977 33444333889999999999988888888888887643332111
Q ss_pred --hh---h------HHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcC
Q 048785 206 --SA---M------LTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATG 274 (280)
Q Consensus 206 --~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~g 274 (280)
.. . ..........++..........+.+.++.+.+++++|+++|.+.+.||++++.+|++.+.++...|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~G 339 (347)
T KOG1198|consen 260 ELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATG 339 (347)
T ss_pred cccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcc
Confidence 10 0 000111112233333434445688999999999999999999999999999999999999999999
Q ss_pred cEEEeC
Q 048785 275 KIILEP 280 (280)
Q Consensus 275 kvvi~~ 280 (280)
|+++.+
T Consensus 340 K~vl~~ 345 (347)
T KOG1198|consen 340 KVVLEK 345 (347)
T ss_pred eEEEEe
Confidence 999864
No 41
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.8e-35 Score=249.30 Aligned_cols=265 Identities=23% Similarity=0.250 Sum_probs=207.7
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
++++|.|.|+++||+||+.+++||+.|..... .. ..+|.++|+|++|+|++ .++.+++||+|++.
T Consensus 23 ~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~--~~----~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~------ 87 (329)
T cd08294 23 LVEEELPPLKDGEVLCEALFLSVDPYMRPYSK--RL----NEGDTMIGTQVAKVIES---KNSKFPVGTIVVAS------ 87 (329)
T ss_pred EEecCCCCCCCCcEEEEEEEEecCHHHhcccc--cC----CCCCcEecceEEEEEec---CCCCCCCCCEEEee------
Confidence 35789999999999999999999998765211 11 13578999999999985 44679999999874
Q ss_pred CcceeEEeeccc---ccccCCCCCC-----hhhhcccchhHHHHHHHHHhhhh----------------------hhhhC
Q 048785 81 GGLAEFAMVKES---LTASRPLEVS-----AAEGAGLPLAGLTALEALTQSAG----------------------LAKLG 130 (280)
Q Consensus 81 g~~~~~~~v~~~---~~~~~p~~~~-----~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~ 130 (280)
++|++|+.++.+ .++++|++++ ...+++++++++|||+++....+ +|+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~ 167 (329)
T cd08294 88 FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIK 167 (329)
T ss_pred CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHc
Confidence 478999999999 9999999988 23334678899999999865443 88999
Q ss_pred CCEEEEEecC-CcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchh-
Q 048785 131 NSHVTATCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSA- 207 (280)
Q Consensus 131 G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~- 207 (280)
|++|++++++ ++.++++++|+++++++++.+ ...+....++++|++|||+|++.+..++++++++|+++.+|.....
T Consensus 168 G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~ 247 (329)
T cd08294 168 GCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYN 247 (329)
T ss_pred CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccC
Confidence 9999999864 789999999999999987765 2333323347899999999998889999999999999988742210
Q ss_pred ---h--HHHHHhhhhccceeeEEEEEcC----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 208 ---M--LTFAWQKLTFSKKQLVPLLVIP----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 208 ---~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
. .......+.+++.++.++.... ..+.++++++++++|++++....+|+++++++|++.+.+++..||+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv 327 (329)
T cd08294 248 DKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIV 327 (329)
T ss_pred CCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEE
Confidence 0 1122334556777777654321 134577889999999998876678999999999999999999999998
Q ss_pred eC
Q 048785 279 EP 280 (280)
Q Consensus 279 ~~ 280 (280)
++
T Consensus 328 ~~ 329 (329)
T cd08294 328 KV 329 (329)
T ss_pred eC
Confidence 75
No 42
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5.2e-35 Score=247.93 Aligned_cols=270 Identities=26% Similarity=0.318 Sum_probs=221.0
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
++++|.|.++++||+||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 15 ~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~ 91 (333)
T cd08296 15 LVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHC 91 (333)
T ss_pred EEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCC
Confidence 3578888899999999999999999999988886532 24578999999999999999999999999998621
Q ss_pred --------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 76 --------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 76 --------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
+....|++++|+.++.+.++++|+++++++++.+++++++||+++... +
T Consensus 92 ~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~vlV~ 170 (333)
T cd08296 92 GTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-GAKPGDLVAVQ 170 (333)
T ss_pred CCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-CCCCCCEEEEE
Confidence 011258999999999999999999999999999999999999998543 3
Q ss_pred -----------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCC-CCCccccccc
Q 048785 126 -----------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCAR-GIPWSTFEPN 191 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~ 191 (280)
+|+.+|++|++++++ ++.+.++++|++++++++... ...+... +++|++||++| +..+..++++
T Consensus 171 g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~ 248 (333)
T cd08296 171 GIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL--GGAKLILATAPNAKAISALVGG 248 (333)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc--CCCCEEEECCCchHHHHHHHHH
Confidence 889999999999865 788999999999999887654 2222222 36999999987 4568889999
Q ss_pred ccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCC
Q 048785 192 LAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGH 271 (280)
Q Consensus 192 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~ 271 (280)
++++|+++.+|.... ...+....+..++.++.+.. ....+++..+++++.++++++.+ +.|+++++.+||+.+.+++
T Consensus 249 l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~ 325 (333)
T cd08296 249 LAPRGKLLILGAAGE-PVAVSPLQLIMGRKSIHGWP-SGTALDSEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGK 325 (333)
T ss_pred cccCCEEEEEecCCC-CCCcCHHHHhhcccEEEEeC-cCCHHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCC
Confidence 999999999986542 22333444556777777765 34567889999999999998775 5899999999999999999
Q ss_pred CcCcEEEe
Q 048785 272 ATGKIILE 279 (280)
Q Consensus 272 ~~gkvvi~ 279 (280)
..||+|++
T Consensus 326 ~~gk~v~~ 333 (333)
T cd08296 326 ARFRVVLT 333 (333)
T ss_pred CceeEEeC
Confidence 99999875
No 43
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.3e-34 Score=246.33 Aligned_cols=275 Identities=28% Similarity=0.339 Sum_probs=220.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
.+++.|.+.++||+|++.++++|++|+....|..+...+..+|.++|+|++|+|+++|+++..+++||+|++...
T Consensus 16 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 95 (340)
T cd05284 16 EDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGT 95 (340)
T ss_pred EeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCC
Confidence 467888899999999999999999999988887653234466889999999999999999999999999987531
Q ss_pred -------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh-h-----------
Q 048785 77 -------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA-G----------- 125 (280)
Q Consensus 77 -------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~-~----------- 125 (280)
....|+|++|+.++.+.++++|+++++++++++++.++|||+++.... .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g 175 (340)
T cd05284 96 CRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIG 175 (340)
T ss_pred ChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEc
Confidence 113689999999999999999999999999999999999999986542 1
Q ss_pred ----------hhhhCC-CEEEEEec-CCcHHHHHhcCCCeeecCCCCCcc-cccCCCCCcccEEEECCCC-CCccccccc
Q 048785 126 ----------LAKLGN-SHVTATCG-ARNIEFVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVIHCARG-IPWSTFEPN 191 (280)
Q Consensus 126 ----------la~~~G-~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~-~~~~~~~~~ 191 (280)
+|+.+| ++|+++++ +++.+.++++|++++++++..... ....+.++++|+++||+|+ ..+..++++
T Consensus 176 ~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~ 255 (340)
T cd05284 176 VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKL 255 (340)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHH
Confidence 788888 79998885 478888899999999887654212 2233455689999999997 558889999
Q ss_pred ccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCC
Q 048785 192 LAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGH 271 (280)
Q Consensus 192 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~ 271 (280)
++++|+++.+|.... ..+.......++..+.+.. ....+.+..+++++++|.+++ ..+.|+++++++|++.+.+++
T Consensus 256 l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~ 331 (340)
T cd05284 256 LAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSL-WGTRAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGR 331 (340)
T ss_pred hhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEe-cccHHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCC
Confidence 999999999875432 1111222234666666554 235678899999999999886 445799999999999999999
Q ss_pred CcCcEEEeC
Q 048785 272 ATGKIILEP 280 (280)
Q Consensus 272 ~~gkvvi~~ 280 (280)
..||+++.+
T Consensus 332 ~~gkvv~~~ 340 (340)
T cd05284 332 VTGRAVLVP 340 (340)
T ss_pred ccceEEecC
Confidence 899999864
No 44
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=3e-34 Score=242.46 Aligned_cols=276 Identities=25% Similarity=0.324 Sum_probs=218.9
Q ss_pred CCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCc
Q 048785 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGG 82 (280)
Q Consensus 3 ~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~ 82 (280)
+.+.|.+.++||+|++.++++|++|+....|..+.......|.++|||++|+|+++|++++.+++||+|++..+ ...|+
T Consensus 19 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~g~ 97 (324)
T cd08244 19 DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG-RAGGG 97 (324)
T ss_pred ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC-CCCce
Confidence 55666788999999999999999999988876542222345788999999999999999999999999998631 13789
Q ss_pred ceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEecC
Q 048785 83 LAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCGA 140 (280)
Q Consensus 83 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~~ 140 (280)
|++|+.++.+.++++|+++++++++++++.++|||..+ ...+ +|+.+|++|++++++
T Consensus 98 ~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~-~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~ 176 (324)
T cd08244 98 YAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLL-DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGG 176 (324)
T ss_pred eeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHH-HhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 99999999999999999999999999999999996543 3322 889999999999964
Q ss_pred -CcHHHHHhcCCCeeecCCCCC-c-ccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhhh
Q 048785 141 -RNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLT 217 (280)
Q Consensus 141 -~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 217 (280)
++.+.++++|++.++++++.. . .......++++|+++||+|+.....++++++++|+++.+|..+.....+......
T Consensus 177 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 256 (324)
T cd08244 177 PAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWTALDEDDAR 256 (324)
T ss_pred HHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCCCCccCHHHHh
Confidence 778888899998888876655 2 2333456678999999999988889999999999999998544322122222223
Q ss_pred ccceeeEEEEEcC-----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 218 FSKKQLVPLLVIP-----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 218 ~~~~~~~~~~~~~-----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
.++..+.+..... ..+.+.+++++++++.+.+.+...|+++++++|++.+.++...+|+++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 257 RRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred hCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 4555555443311 24567888999999999887878999999999999999999999999875
No 45
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=3e-34 Score=243.64 Aligned_cols=270 Identities=21% Similarity=0.291 Sum_probs=221.2
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
+++++.|+++++||+||+.++++|++|+....|... ...+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 14 ~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 90 (337)
T cd05283 14 PFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSC 90 (337)
T ss_pred EEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCC
Confidence 357899999999999999999999999999888753 235688999999999999999999999999997320
Q ss_pred ---------------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh---
Q 048785 76 ---------------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG--- 125 (280)
Q Consensus 76 ---------------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~--- 125 (280)
+....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.+..-
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g 170 (337)
T cd05283 91 GTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPG 170 (337)
T ss_pred CCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence 11246899999999999999999999999999999999999999855311
Q ss_pred -----------------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cc
Q 048785 126 -----------------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WS 186 (280)
Q Consensus 126 -----------------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~ 186 (280)
+++.+|++|++++++ ++.++++++|++.+++.+...... ..++++|++|||+++.. +.
T Consensus 171 ~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~~~~~d~v~~~~g~~~~~~ 247 (337)
T cd05283 171 KRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMK---KAAGSLDLIIDTVSASHDLD 247 (337)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhh---hccCCceEEEECCCCcchHH
Confidence 888899999998865 788888899999988765543211 12467999999999875 88
Q ss_pred cccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHH
Q 048785 187 TFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAK 266 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~ 266 (280)
.++++++++|+++.+|...... .++...+..++.++.+... ...+.++.+++++.++++++.+ +.|+++++++||+.
T Consensus 248 ~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~ 324 (337)
T cd05283 248 PYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSLI-GGRKETQEMLDFAAEHGIKPWV-EVIPMDGINEALER 324 (337)
T ss_pred HHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEecc-cCHHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHH
Confidence 9999999999999998544321 2333444557778777664 4678899999999999998765 68999999999999
Q ss_pred HhcCCCcCcEEEe
Q 048785 267 GADGHATGKIILE 279 (280)
Q Consensus 267 ~~~~~~~gkvvi~ 279 (280)
+.+++..||+|++
T Consensus 325 ~~~~~~~~k~v~~ 337 (337)
T cd05283 325 LEKGDVRYRFVLD 337 (337)
T ss_pred HHcCCCcceEeeC
Confidence 9999999999874
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.3e-34 Score=250.63 Aligned_cols=277 Identities=24% Similarity=0.271 Sum_probs=219.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCC------CC-CCCccccccceEEEEEeCCCCCCCCCCCEEEEe
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPIL------PR-KFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI 74 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~------~~-~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 74 (280)
+++|.|.++++||+|++.+++||.+|+....|...... +. ..+.++|||++|+|+++|++++.+++||+|++.
T Consensus 33 ~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 112 (393)
T cd08246 33 EDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVH 112 (393)
T ss_pred eecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEEEe
Confidence 56788999999999999999999999988776521100 00 123588999999999999999999999999875
Q ss_pred ec-------------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhh--hh--
Q 048785 75 LN-------------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQS--AG-- 125 (280)
Q Consensus 75 ~~-------------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~--~~-- 125 (280)
.. ....|+|++|+.++...++++|+++++++++.++..+.|||+++... ++
T Consensus 113 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~ 192 (393)
T cd08246 113 CSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVK 192 (393)
T ss_pred ccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCC
Confidence 31 01358999999999999999999999999999999999999998543 22
Q ss_pred --------------------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCC-----------------------
Q 048785 126 --------------------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPD----------------------- 161 (280)
Q Consensus 126 --------------------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~----------------------- 161 (280)
+|+.+|++++++++ +++.+.++++|+++++++++.+
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRF 272 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchH
Confidence 88999998888875 4788999999999999875431
Q ss_pred -cccccCCCCC-cccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHH
Q 048785 162 -GAALKSPSGR-KYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLV 239 (280)
Q Consensus 162 -~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (280)
....+.++++ ++|++|||+|+..+..++++++++|+++.+|........+....+..++.++.+.. ....+++..++
T Consensus 273 ~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~-~~~~~~~~~~~ 351 (393)
T cd08246 273 GKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSH-FANDREAAEAN 351 (393)
T ss_pred HHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecc-cCcHHHHHHHH
Confidence 0112334555 79999999998778899999999999999985433222233444555666666654 23567889999
Q ss_pred HHHHCCCeeEeccceecchhHHHHHHHHhcC-CCcCcEEEe
Q 048785 240 KLLKEGKIKTLIDSKHLLSKAEDAWAKGADG-HATGKIILE 279 (280)
Q Consensus 240 ~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~ 279 (280)
++++++.+.+.++++|+++++++|++.+.++ ...||+++-
T Consensus 352 ~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 352 RLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred HHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 9999999988888899999999999999988 788899874
No 47
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.4e-34 Score=247.00 Aligned_cols=275 Identities=23% Similarity=0.260 Sum_probs=215.5
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
+++|.|.+.++||+||+.++++|++|+....|.... ..+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 91 (351)
T cd08285 15 IEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWR 91 (351)
T ss_pred EECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCC
Confidence 577888899999999999999999999988776532 356789999999999999999999999999987320
Q ss_pred ----------------------CCCCCcceeEEeeccc--ccccCCCCCChhhhcccchhHHHHHHHHHhhhh-------
Q 048785 77 ----------------------HFSGGGLAEFAMVKES--LTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------- 125 (280)
Q Consensus 77 ----------------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------- 125 (280)
....|+|++|+.+|.+ .++++|++++++++++++..++|||+++.. ++
T Consensus 92 c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~v 170 (351)
T cd08285 92 SVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAEL-ANIKLGDTV 170 (351)
T ss_pred CHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHHHc-cCCCCCCEE
Confidence 1136899999999974 899999999999999999899999998642 22
Q ss_pred --------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCC-Ccc
Q 048785 126 --------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGI-PWS 186 (280)
Q Consensus 126 --------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~ 186 (280)
+|+.+|+ .|++++++ ++.+.++++|++.++++++.+ ......+.++++|++|||+|+. .+.
T Consensus 171 lI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~ 250 (351)
T cd08285 171 AVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFE 250 (351)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHH
Confidence 8899999 68888865 788888999999999887654 2233345567899999999975 578
Q ss_pred cccccccCCcEEEEeCCCchh-hHHHH--HhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE---eccceecchhH
Q 048785 187 TFEPNLAENGKVIDLTPTPSA-MLTFA--WQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT---LIDSKHLLSKA 260 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~---~~~~~~~~~~~ 260 (280)
.++++++++|+++.+|..... ...+. ......+..++.+.......++++++++++++|++++ .+.+.|+++++
T Consensus 251 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~ 330 (351)
T cd08285 251 QALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDI 330 (351)
T ss_pred HHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHH
Confidence 999999999999998754421 11111 1112234444554333335678999999999999987 44567999999
Q ss_pred HHHHHHHhcCC-CcCcEEEeC
Q 048785 261 EDAWAKGADGH-ATGKIILEP 280 (280)
Q Consensus 261 ~~a~~~~~~~~-~~gkvvi~~ 280 (280)
++||+.+.+++ ...|++|++
T Consensus 331 ~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 331 EEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHHHHHHhcccCCeEEEEEeC
Confidence 99999999887 468999864
No 48
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3.6e-34 Score=243.21 Aligned_cols=275 Identities=28% Similarity=0.352 Sum_probs=211.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
.|+|.|+++++||+||+.++++|+.|.....|..+. ..+|.++|+|++|+|+++|++++.+++||+|+++......|
T Consensus 20 ~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 96 (336)
T TIGR02817 20 IDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE---AGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPG 96 (336)
T ss_pred cccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC---CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCC
Confidence 578889999999999999999999999988776532 24678999999999999999999999999999864333469
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh---------h------------------hhhhC-CCE
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA---------G------------------LAKLG-NSH 133 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~---------~------------------la~~~-G~~ 133 (280)
+|++|+.++.+.++++|++++++++++++++++|||+++.... + +|+.+ |++
T Consensus 97 ~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~ 176 (336)
T TIGR02817 97 SNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLT 176 (336)
T ss_pred cccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCE
Confidence 9999999999999999999999999999999999999984421 2 78887 999
Q ss_pred EEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-CCcccccccccCCcEEEEeCCCchhhH-H
Q 048785 134 VTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-IPWSTFEPNLAENGKVIDLTPTPSAML-T 210 (280)
Q Consensus 134 Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~-~ 210 (280)
|+++++ +++.+.++++|++++++++......+....++++|+++||+++ ..+...+++++++|+++.++....... .
T Consensus 177 vi~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~ 256 (336)
T TIGR02817 177 VIATASRPESQEWVLELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISP 256 (336)
T ss_pred EEEEcCcHHHHHHHHHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEcccccccchh
Confidence 999986 4788888999999999865422233333455689999999864 568899999999999998863321111 1
Q ss_pred HHHhhhhccceeeE-EEEE-cC----CHHHHHHHHHHHHCCCeeEeccceec---chhHHHHHHHHhcCCCcCcEEEe
Q 048785 211 FAWQKLTFSKKQLV-PLLV-IP----KGENLVFLVKLLKEGKIKTLIDSKHL---LSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 211 ~~~~~~~~~~~~~~-~~~~-~~----~~~~~~~~~~~i~~g~~~~~~~~~~~---~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
+..++..+....+. .... .. ..+.++++++++.++.+++.+.+.++ ++++++|++.+.+++..||++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 257 FKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred hhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 11122222221111 0000 01 12467889999999999887665664 68999999999999888999874
No 49
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.9e-34 Score=227.05 Aligned_cols=268 Identities=23% Similarity=0.249 Sum_probs=210.0
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccc----eEEEEEeCCCCCCCCCCCEEEEeec
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDV----AGEIIEVGSEVKNFKAGYNVVAILN 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~----~G~V~~vG~~v~~~~~Gd~V~~~~~ 76 (280)
++|+++|.|+++|||||+.|.+++|. ++|++.....-..|.-+|-.. +|+|++ |+..+|++||.|++..
T Consensus 29 lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V~~~~- 101 (340)
T COG2130 29 LEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIVVGVS- 101 (340)
T ss_pred eEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEEEecc-
Confidence 47899999999999999999999993 344443211113455666555 455555 6677899999999874
Q ss_pred CCCCCcceeEEeecccccccCCCCCChhhh--cccchhHHHHHHHHHhhhh----------------------hhhhCCC
Q 048785 77 HFSGGGLAEFAMVKESLTASRPLEVSAAEG--AGLPLAGLTALEALTQSAG----------------------LAKLGNS 132 (280)
Q Consensus 77 ~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a--a~~~~~~~~a~~~l~~~~~----------------------la~~~G~ 132 (280)
+|++|..++.+.+.|+++..-+..+ ..+..++.|||.+|.+..+ |||..|+
T Consensus 102 -----GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~ 176 (340)
T COG2130 102 -----GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC 176 (340)
T ss_pred -----cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC
Confidence 7999999999999999765433333 2345677899999988766 9999999
Q ss_pred EEEEEec-CCcHHHHHh-cCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCc----
Q 048785 133 HVTATCG-ARNIEFVKS-LGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTP---- 205 (280)
Q Consensus 133 ~Vi~~~~-~~~~~~~~~-~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~---- 205 (280)
+|+++++ ++|.+++.+ +|.|.++||+..+ .+.+...+++++|++||++|++.++.++..|+.++|+..+|.-+
T Consensus 177 rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~ 256 (340)
T COG2130 177 RVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYNA 256 (340)
T ss_pred eEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcCC
Confidence 9999995 689999987 9999999999988 55666678899999999999999999999999999999998322
Q ss_pred --hhhHHHHHhhhhccceeeEEEEEcC-----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 206 --SAMLTFAWQKLTFSKKQLVPLLVIP-----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 206 --~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
..........+..++.++.++.... ..+..+++..|+++|+|+...+-+-.|+++|+||.-|.+++++||+|+
T Consensus 257 ~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vv 336 (340)
T COG2130 257 PELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVV 336 (340)
T ss_pred CCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCccceEEE
Confidence 1111222334444577777776522 236788999999999999877766779999999999999999999999
Q ss_pred eC
Q 048785 279 EP 280 (280)
Q Consensus 279 ~~ 280 (280)
++
T Consensus 337 Kv 338 (340)
T COG2130 337 KV 338 (340)
T ss_pred Ee
Confidence 75
No 50
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=4.9e-34 Score=242.85 Aligned_cols=277 Identities=26% Similarity=0.309 Sum_probs=217.7
Q ss_pred CCCCCCCCCCC-CeEEEEEeeeecChhhHHhHhccCCCCCC--CCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC
Q 048785 1 HVHVPVPTPRK-DEVLLKVEASSLNAFDWKIKKGVARPILP--RKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH 77 (280)
Q Consensus 1 ~~~~~~~~~~~-~evlV~v~~~~i~~~d~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 77 (280)
+++.|.|++.+ +||+||+.++++|++|+....|..+.... ..+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 18 ~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~- 96 (341)
T cd08290 18 LESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP- 96 (341)
T ss_pred EeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC-
Confidence 35778888887 99999999999999999988887542100 125679999999999999999999999999998631
Q ss_pred CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEE
Q 048785 78 FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVT 135 (280)
Q Consensus 78 ~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi 135 (280)
..|+|++|+.++.+.++++|+++++++++++++.+.|||+++..... +|+..|++|+
T Consensus 97 -~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~ 175 (341)
T cd08290 97 -GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTI 175 (341)
T ss_pred -CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEE
Confidence 25899999999999999999999999999999999999999865422 8899999999
Q ss_pred EEecC-----CcHHHHHhcCCCeeecCCCC---C-cccc-cCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCc
Q 048785 136 ATCGA-----RNIEFVKSLGADEVLDYKTP---D-GAAL-KSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTP 205 (280)
Q Consensus 136 ~~~~~-----~~~~~~~~~g~~~v~~~~~~---~-~~~~-~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~ 205 (280)
+++++ ++.+.++++|++++++++.. . ...+ ....+ ++|++|||+|+..+..++++++++|+++.+|...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (341)
T cd08290 176 NVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSATELARLLSPGGTMVTYGGMS 254 (341)
T ss_pred EEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhHHHHHHHhCCCCEEEEEeccC
Confidence 88854 45778888999999987764 3 2222 23344 7999999999988888999999999999987433
Q ss_pred hhhHHHHHhhhhccceeeEEEEEcC---------CHHHHHHHHHHHHCCCeeEecccee---cchhHHHHHHHHhcCCCc
Q 048785 206 SAMLTFAWQKLTFSKKQLVPLLVIP---------KGENLVFLVKLLKEGKIKTLIDSKH---LLSKAEDAWAKGADGHAT 273 (280)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~g~~~~~~~~~~---~~~~~~~a~~~~~~~~~~ 273 (280)
.....+.......++..+.+..... ..+.++.+++++.+|++.+....++ +++++++|++.+.++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 334 (341)
T cd08290 255 GQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGG 334 (341)
T ss_pred CCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCC
Confidence 2222222223344566666554311 1235788899999999987666667 999999999999999989
Q ss_pred CcEEEeC
Q 048785 274 GKIILEP 280 (280)
Q Consensus 274 gkvvi~~ 280 (280)
+|+++++
T Consensus 335 ~k~v~~~ 341 (341)
T cd08290 335 GKQVLVM 341 (341)
T ss_pred CeEEEeC
Confidence 9999874
No 51
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3.9e-34 Score=245.67 Aligned_cols=274 Identities=26% Similarity=0.370 Sum_probs=219.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCC---CCCCCEEEEeecC-
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKN---FKAGYNVVAILNH- 77 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~- 77 (280)
++.|.|.++++||+|++.++++|++|+....|..+ ..+|.++|||++|+|+++|+++++ +++||+|++....
T Consensus 16 ~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~ 91 (367)
T cd08263 16 EEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMP 91 (367)
T ss_pred EEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCC
Confidence 46788889999999999999999999998887664 256789999999999999999988 9999999873100
Q ss_pred ---------------------------------------------CCCCcceeEEeecccccccCCCCCChhhhcccchh
Q 048785 78 ---------------------------------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLA 112 (280)
Q Consensus 78 ---------------------------------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 112 (280)
...|++++|+.++.+.++++|+++++.++++++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~ 171 (367)
T cd08263 92 CGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCA 171 (367)
T ss_pred CCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcch
Confidence 13589999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhh---------------------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCC-c-ccccC
Q 048785 113 GLTALEALTQSAG---------------------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPD-G-AALKS 167 (280)
Q Consensus 113 ~~~a~~~l~~~~~---------------------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~-~-~~~~~ 167 (280)
++|||+++..... +|+.+|++ |+++++ +++.+.++++|++.+++++... . .....
T Consensus 172 ~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~ 251 (367)
T cd08263 172 GFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREI 251 (367)
T ss_pred HHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHH
Confidence 9999999865432 88899996 888875 4778888889999999887655 2 23334
Q ss_pred CCCCcccEEEECCCCC-CcccccccccCCcEEEEeCCCchh-hHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCC
Q 048785 168 PSGRKYDAVIHCARGI-PWSTFEPNLAENGKVIDLTPTPSA-MLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEG 245 (280)
Q Consensus 168 ~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g 245 (280)
..++++|++|||+++. .+..++++++++|+++.++..... ...+....+..++..+.+......++.++.++++++++
T Consensus 252 ~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 331 (367)
T cd08263 252 TGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASG 331 (367)
T ss_pred hCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcC
Confidence 4567899999999997 788899999999999999754321 11222233334555555533222357899999999999
Q ss_pred CeeEe--ccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 246 KIKTL--IDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 246 ~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
.+.+. +++.++++++.++++.+.+++..||+|++
T Consensus 332 ~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 332 KLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 98763 67889999999999999999888999874
No 52
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.6e-33 Score=237.87 Aligned_cols=273 Identities=24% Similarity=0.339 Sum_probs=218.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
++.|.|.+++++|+||+.++++|+.|+..+.|.... ...+|.++|+|++|+|+++|++++.+++||+|++.. ..|
T Consensus 17 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---~~g 91 (323)
T cd05282 17 VSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---GEG 91 (323)
T ss_pred EeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC---CCC
Confidence 466788899999999999999999999988776542 124578999999999999999999999999999863 168
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
+|++|+.++.+.++++|+++++.+++.+++.+++||+++..... +|+.+|++++++++
T Consensus 92 ~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~ 171 (323)
T cd05282 92 TWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVR 171 (323)
T ss_pred cceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEec
Confidence 99999999999999999999999999999999999999865432 88999999998885
Q ss_pred -CCcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhh
Q 048785 140 -ARNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKL 216 (280)
Q Consensus 140 -~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 216 (280)
+++.+.++++|++++++++... ......+.++++|++|||+|+......+++++++|+++.+|........+....+
T Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 251 (323)
T cd05282 172 RDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVF 251 (323)
T ss_pred ChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHH
Confidence 4788888899999999887644 2233456677899999999998878889999999999998754332111122222
Q ss_pred hccceeeEEEEEcC---------CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 217 TFSKKQLVPLLVIP---------KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 217 ~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
..++..+.+..... ..+.+.++++++.++++.+.+.+.|+++++++||+.+.++...+|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 252 IFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred hhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 22445544443311 1246788899999999988778899999999999999988888899874
No 53
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=2.4e-33 Score=237.04 Aligned_cols=274 Identities=22% Similarity=0.259 Sum_probs=212.1
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee---cCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL---NHF 78 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~~ 78 (280)
+++|.|.++++||+|++.++++|++|+....|..+. ...+|.++|||++|+|+++ +++.+++||+|++.. +..
T Consensus 18 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~ 93 (325)
T cd05280 18 RTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYDLGMN 93 (325)
T ss_pred EeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccccCCC
Confidence 578889999999999999999999999988887532 2245779999999999998 456799999999752 122
Q ss_pred CCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh--------h-----------------hhhhCCCE
Q 048785 79 SGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA--------G-----------------LAKLGNSH 133 (280)
Q Consensus 79 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~--------~-----------------la~~~G~~ 133 (280)
..|+|++|+.+|.+.++++|+++++++++.+++.+.+||+++.... + +|+.+|++
T Consensus 94 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~ 173 (325)
T cd05280 94 TDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT 173 (325)
T ss_pred CCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE
Confidence 3689999999999999999999999999999999999999875421 1 88999999
Q ss_pred EEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHH
Q 048785 134 VTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFA 212 (280)
Q Consensus 134 Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 212 (280)
|++++++ ++.+.++++|+++++++++..........++++|++|||+|+..+..++++++++|+++.+|........+.
T Consensus 174 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 253 (325)
T cd05280 174 VVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPELTTT 253 (325)
T ss_pred EEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCccccc
Confidence 9988864 788888999999998876532222233445579999999999889999999999999999985432211222
Q ss_pred HhhhhccceeeEEEEEcC-----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 213 WQKLTFSKKQLVPLLVIP-----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
...+..++..+.+..... ..+.++.+.+++..+ +.+.+..+|+++++++|++.+.+++..||+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 254 VLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-LLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred cchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-CccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 333335666666644321 123445555566666 4445778999999999999999999999999874
No 54
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.9e-33 Score=233.10 Aligned_cols=262 Identities=27% Similarity=0.329 Sum_probs=211.9
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
++.|.|.++++||+||+.++++|+.|+....+. ..|.++|+|++|+|+++|++++.+++||+|+++. ..|
T Consensus 17 ~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-------~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---~~g 86 (305)
T cd08270 17 GEVPDPQPAPHEALVRVAAISLNRGELKFAAER-------PDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG---AMG 86 (305)
T ss_pred EecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-------CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec---CCc
Confidence 467888899999999999999999999876521 2356899999999999999999999999999874 379
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh---------------------hhhhCCCEEEEEecC
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------------------LAKLGNSHVTATCGA 140 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------------------la~~~G~~Vi~~~~~ 140 (280)
+|++|+.++.+.++++|+++++++++++++.+.|||+++..... +++.+|++|++++++
T Consensus 87 ~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~ 166 (305)
T cd08270 87 AWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGS 166 (305)
T ss_pred ceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 99999999999999999999999999999999999999855421 888999999999864
Q ss_pred -CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhhhc-
Q 048785 141 -RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTF- 218 (280)
Q Consensus 141 -~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~- 218 (280)
++.+.++++|++.++.... . ..++++|+++||+|+..+..++++++++|+++.+|........+....+..
T Consensus 167 ~~~~~~~~~~g~~~~~~~~~------~-~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 239 (305)
T cd08270 167 PARAEGLRELGAAEVVVGGS------E-LSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGG 239 (305)
T ss_pred HHHHHHHHHcCCcEEEeccc------c-ccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcc
Confidence 7888898899876654322 1 122479999999999888999999999999999985432212222222222
Q ss_pred -cceeeEEEEEc---CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 219 -SKKQLVPLLVI---PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 219 -~~~~~~~~~~~---~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++..+.+.... ...+.+..++++++++++++.+.++++++++++|++.+.++...||+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 240 GGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred cccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 35555554432 124678889999999999987778999999999999999998889999875
No 55
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.6e-33 Score=242.99 Aligned_cols=274 Identities=22% Similarity=0.204 Sum_probs=215.4
Q ss_pred CCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC---
Q 048785 2 VHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH--- 77 (280)
Q Consensus 2 ~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--- 77 (280)
+++|.|.+ ++++|+||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|++....
T Consensus 15 ~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g 91 (386)
T cd08283 15 EEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACG 91 (386)
T ss_pred EeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCC
Confidence 56788887 4999999999999999999999887653 3567899999999999999999999999999874200
Q ss_pred -----------------------------------------CCCCcceeEEeeccc--ccccCCCCCChhhhcccchhHH
Q 048785 78 -----------------------------------------FSGGGLAEFAMVKES--LTASRPLEVSAAEGAGLPLAGL 114 (280)
Q Consensus 78 -----------------------------------------~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~ 114 (280)
...|+|++|+.++.+ .++++|++++++++++++..++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ 171 (386)
T cd08283 92 ECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILP 171 (386)
T ss_pred CChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchh
Confidence 025899999999987 8999999999999999999999
Q ss_pred HHHHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC---cccccCC
Q 048785 115 TALEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD---GAALKSP 168 (280)
Q Consensus 115 ~a~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 168 (280)
+||+++ ...+ +|+.+|+ +|+++++ +++.+.+++++...++++.... ......+
T Consensus 172 ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~ 250 (386)
T cd08283 172 TGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELT 250 (386)
T ss_pred hhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHc
Confidence 999998 4433 8889998 6999885 5788888888545677766542 2233445
Q ss_pred CCCcccEEEECCCCC----------------------CcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEE
Q 048785 169 SGRKYDAVIHCARGI----------------------PWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPL 226 (280)
Q Consensus 169 ~~~~~d~v~d~~g~~----------------------~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 226 (280)
.++++|++|||+|+. .+..++++++++|+++.+|........+.......++..+.+.
T Consensus 251 ~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~ 330 (386)
T cd08283 251 GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMG 330 (386)
T ss_pred CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEec
Confidence 566899999999864 3667889999999999998544322222222334456665554
Q ss_pred EEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHHhcCC-CcCcEEEeC
Q 048785 227 LVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKGADGH-ATGKIILEP 280 (280)
Q Consensus 227 ~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~~ 280 (280)
. ....+.+.++++++.++++.+ .+.+.|+++++++||+.+.++. ..+|+++++
T Consensus 331 ~-~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 331 Q-THVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred c-CCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 3 234678899999999999976 4668899999999999998876 568999874
No 56
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=3e-33 Score=236.73 Aligned_cols=274 Identities=23% Similarity=0.268 Sum_probs=214.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
++++.|.++++||+||+.++++|++|+.+..|..+. ..+|.++|||++|+|+++|++++.+++||+|+.... ..|
T Consensus 19 ~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~--~~g 93 (327)
T PRK10754 19 VEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS--ALG 93 (327)
T ss_pred eeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCC--CCc
Confidence 577888899999999999999999999988776542 245778999999999999999999999999986521 358
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
+|++|+.++.+.++++|+++++++++++++.+.+||.++....+ +|+.+|++|+++++
T Consensus 94 ~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~ 173 (327)
T PRK10754 94 AYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG 173 (327)
T ss_pred ceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999999999999999999865432 88999999998886
Q ss_pred C-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhh
Q 048785 140 A-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKL 216 (280)
Q Consensus 140 ~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 216 (280)
+ ++.+.++++|++++++.+... ...+..+.++++|++|||+|+..+..++++++++|+++.+|........+....+
T Consensus 174 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 253 (327)
T PRK10754 174 SAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGIL 253 (327)
T ss_pred CHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHH
Confidence 4 788888899999898876654 2233456677899999999988788899999999999999744321111111111
Q ss_pred hc------cceeeEEEEEc--CCHHHHHHHHHHHHCCCeeEe--ccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 217 TF------SKKQLVPLLVI--PKGENLVFLVKLLKEGKIKTL--IDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 217 ~~------~~~~~~~~~~~--~~~~~~~~~~~~i~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
.. ....+.....+ ...+.+..+++++.+|++++. ..++|++++++++++.+.++...+|+|+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 254 NQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred hccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 11 11111121111 112345678999999999853 468999999999999999999899999864
No 57
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.6e-33 Score=240.20 Aligned_cols=272 Identities=24% Similarity=0.253 Sum_probs=214.0
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
++++.|.++++||+||+.++++|++|+....|..+ ..+|.++|+|++|+|+++|++++++++||+|++...
T Consensus 18 ~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 93 (365)
T cd08278 18 EDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGEC 93 (365)
T ss_pred EEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcccCCCCC
Confidence 56788889999999999999999999999888764 246789999999999999999999999999985210
Q ss_pred -----------------------------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHH
Q 048785 77 -----------------------------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLT 115 (280)
Q Consensus 77 -----------------------------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~ 115 (280)
....|+|++|+.++.+.++++|+++++++++.+++++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~t 173 (365)
T cd08278 94 ANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQT 173 (365)
T ss_pred hHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhh
Confidence 012489999999999999999999999999999999999
Q ss_pred HHHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC-c-ccccCCCC
Q 048785 116 ALEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD-G-AALKSPSG 170 (280)
Q Consensus 116 a~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~ 170 (280)
|+.++..... +|+..|+ +|+++++ +++.+.++++|++.++++++.. . .....+ +
T Consensus 174 a~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~-~ 252 (365)
T cd08278 174 GAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREIT-G 252 (365)
T ss_pred hhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHh-C
Confidence 9998855432 8899999 6888875 4788888999999999887654 2 233334 6
Q ss_pred CcccEEEECCCCC-CcccccccccCCcEEEEeCCCc-hhhHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHHCCC
Q 048785 171 RKYDAVIHCARGI-PWSTFEPNLAENGKVIDLTPTP-SAMLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLKEGK 246 (280)
Q Consensus 171 ~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~g~ 246 (280)
+++|+++||+|+. .+..++++++++|+++.+|... .....++...+..++..+.+.... ...+.+.++++++++|+
T Consensus 253 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 332 (365)
T cd08278 253 GGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGK 332 (365)
T ss_pred CCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCC
Confidence 7899999999864 5789999999999999998542 112223333333456666554431 22467788999999999
Q ss_pred eeE-eccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 247 IKT-LIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 247 ~~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
+.+ .+...|+++++++|++.+.++... |++++
T Consensus 333 l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 333 FPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred CChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 854 244589999999999999877654 77764
No 58
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.3e-33 Score=239.47 Aligned_cols=277 Identities=28% Similarity=0.334 Sum_probs=220.3
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCC---------CCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI---------LPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNV 71 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~---------~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 71 (280)
++++|.|+++++||+|++.++++|++|+....|..+.. ....+|.++|+|++|+|+++|++++.+++||+|
T Consensus 15 ~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 94 (350)
T cd08240 15 EVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKV 94 (350)
T ss_pred EEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEE
Confidence 35788899999999999999999999999887754310 012456789999999999999999999999999
Q ss_pred EEeec------------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh--
Q 048785 72 VAILN------------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG-- 125 (280)
Q Consensus 72 ~~~~~------------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~-- 125 (280)
+++.. ....|++++|+.++.+.++++|+++++.+++++++.+.+||+++.....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~ 174 (350)
T cd08240 95 LVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLV 174 (350)
T ss_pred EECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCC
Confidence 87510 0146899999999999999999999999999999999999999865432
Q ss_pred -------------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCC-cc-cccCCCCCcccEEEECCCC
Q 048785 126 -------------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCARG 182 (280)
Q Consensus 126 -------------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~ 182 (280)
+|+.+|+ +|++++++ ++.+.++++|++.++++++.. .. ......+ ++|++|||+|+
T Consensus 175 ~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~ 253 (350)
T cd08240 175 ADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGG-GVDAVIDFVNN 253 (350)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCC-CCcEEEECCCC
Confidence 8899999 78888754 788888999998888876654 22 2223334 79999999985
Q ss_pred -CCcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHH
Q 048785 183 -IPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAE 261 (280)
Q Consensus 183 -~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~ 261 (280)
..+..++++|+++|+++.+|..... .........+++..+.+... ...+++.+++++++++.+++.....|++++++
T Consensus 254 ~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~ 331 (350)
T cd08240 254 SATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYV-GSLEELRELVALAKAGKLKPIPLTERPLSDVN 331 (350)
T ss_pred HHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEccc-CCHHHHHHHHHHHHcCCCccceeeEEcHHHHH
Confidence 5588999999999999998754322 11222234456667666543 34578899999999999987777789999999
Q ss_pred HHHHHHhcCCCcCcEEEeC
Q 048785 262 DAWAKGADGHATGKIILEP 280 (280)
Q Consensus 262 ~a~~~~~~~~~~gkvvi~~ 280 (280)
+|++.+.++...+|+++.+
T Consensus 332 ~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 332 DALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred HHHHHHHcCCccceEEecC
Confidence 9999999988889999864
No 59
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.8e-33 Score=237.19 Aligned_cols=271 Identities=20% Similarity=0.199 Sum_probs=207.1
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
++++|.|.++++|++||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 14 ~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 90 (339)
T PRK10083 14 IEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCG 90 (339)
T ss_pred EEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCC
Confidence 3578889999999999999999999999988776542 24688999999999999999999999999998421
Q ss_pred -------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 76 -------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 76 -------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
+....|+|++|+.++.+.++++|+++++++++ +...+.++|.++ ...+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~-~~~~~~~g~~vlI~g 168 (339)
T PRK10083 91 HCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT-GRTGPTEQDVALIYG 168 (339)
T ss_pred CCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-HhcCCCCCCEEEEEC
Confidence 11136899999999999999999999998876 445666777654 3322
Q ss_pred ----------hhhh-CCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCC-Ccccccc
Q 048785 126 ----------LAKL-GNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGI-PWSTFEP 190 (280)
Q Consensus 126 ----------la~~-~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~ 190 (280)
+|+. +|+ .++++++ +++.+.++++|+++++++++.. ...+. ..+.++|++|||+|++ .+..+++
T Consensus 169 ~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~-~~g~~~d~vid~~g~~~~~~~~~~ 247 (339)
T PRK10083 169 AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALE-EKGIKPTLIIDAACHPSILEEAVT 247 (339)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHh-cCCCCCCEEEECCCCHHHHHHHHH
Confidence 6775 699 4666765 4788899999999999887644 22221 1233468999999964 5889999
Q ss_pred cccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHHh
Q 048785 191 NLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKGA 268 (280)
Q Consensus 191 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~~ 268 (280)
+++++|+++.+|.... ...+....+..+++++.+.. ...+.++++++++++|++++ +++++|+++++++|++.+.
T Consensus 248 ~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~ 324 (339)
T PRK10083 248 LASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSR--LNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFE 324 (339)
T ss_pred HhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEe--cChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHh
Confidence 9999999999985432 11112223334555555443 25678999999999999987 4778999999999999988
Q ss_pred cCC-CcCcEEEeC
Q 048785 269 DGH-ATGKIILEP 280 (280)
Q Consensus 269 ~~~-~~gkvvi~~ 280 (280)
++. ..+|+++.+
T Consensus 325 ~~~~~~~kvvv~~ 337 (339)
T PRK10083 325 KDQRHCCKVLLTF 337 (339)
T ss_pred cCCCceEEEEEec
Confidence 653 568998853
No 60
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.3e-33 Score=242.09 Aligned_cols=278 Identities=23% Similarity=0.247 Sum_probs=217.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCC-------CCCCCC-ccccccceEEEEEeCCCCCCCCCCCEEEE
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI-------LPRKFP-YIPATDVAGEIIEVGSEVKNFKAGYNVVA 73 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~-------~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 73 (280)
+++|.|.++++||+|++.++++|.+|.....+..... .....| .++|||++|+|+++|++++.+++||+|++
T Consensus 28 ~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 107 (398)
T TIGR01751 28 EVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVA 107 (398)
T ss_pred eecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEEE
Confidence 4678889999999999999999999987665543110 000223 37999999999999999999999999987
Q ss_pred eec-------------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHh--hhh-
Q 048785 74 ILN-------------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQ--SAG- 125 (280)
Q Consensus 74 ~~~-------------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~--~~~- 125 (280)
... ....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.. ..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~ 187 (398)
T TIGR01751 108 SCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATV 187 (398)
T ss_pred ccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCC
Confidence 531 0135899999999999999999999999999999999999999854 121
Q ss_pred ---------------------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCC----------------------
Q 048785 126 ---------------------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPD---------------------- 161 (280)
Q Consensus 126 ---------------------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---------------------- 161 (280)
+|+.+|++++++++ +++.+.++++|++.++|+++.+
T Consensus 188 ~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (398)
T TIGR01751 188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKR 267 (398)
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchh
Confidence 88899998887775 4788888899999999875431
Q ss_pred --cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHH
Q 048785 162 --GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLV 239 (280)
Q Consensus 162 --~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (280)
....+.+.++++|++|||+|+..+..++++++++|+++.+|........+....+..++..+.+.. ....+++++++
T Consensus 268 ~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 346 (398)
T TIGR01751 268 FGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSH-FANLREAWEAN 346 (398)
T ss_pred HHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccc-cCcHHHHHHHH
Confidence 011223455789999999998778899999999999999986543222233334444555555543 23456678899
Q ss_pred HHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 240 KLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 240 ~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++++++++.+.+++++++++++++|+.+.++...||+|+++
T Consensus 347 ~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 347 RLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred HHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence 99999999988889999999999999999999899999864
No 61
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7e-33 Score=235.75 Aligned_cols=274 Identities=27% Similarity=0.352 Sum_probs=220.5
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
+++|.|.+.++|++||+.++++|+.|+.+..|..+. ....|.++|+|++|+|+++|++++.+++||+|+...
T Consensus 17 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~ 94 (341)
T cd08297 17 KDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACG 94 (341)
T ss_pred EEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc--CCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCC
Confidence 467788899999999999999999999988776642 124467899999999999999999999999998641
Q ss_pred -------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 76 -------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 76 -------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
+....|++++|+.++.+.++++|++++++++++++..+.|||+++... +
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~-~~~~~~~vlV~g 173 (341)
T cd08297 95 KCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKA-GLKPGDWVVISG 173 (341)
T ss_pred CCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhc-CCCCCCEEEEEC
Confidence 011368999999999999999999999999999999999999998552 2
Q ss_pred -----------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCC-CCcccccc
Q 048785 126 -----------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARG-IPWSTFEP 190 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~ 190 (280)
+|+.+|++|++++++ ++.+.++++|++.++++++.. ......+.++++|++|||.++ ..+..+++
T Consensus 174 ~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~ 253 (341)
T cd08297 174 AGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALD 253 (341)
T ss_pred CCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHH
Confidence 889999999999865 778888889999999887654 223344556789999997764 55788999
Q ss_pred cccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcC
Q 048785 191 NLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADG 270 (280)
Q Consensus 191 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~ 270 (280)
+++++|+++.+|........+....+..++.++.+... ...++++.++++++++.+++.+ ..|++++++++++.+.++
T Consensus 254 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~ 331 (341)
T cd08297 254 YLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLV-GTRQDLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEG 331 (341)
T ss_pred HhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEecc-CCHHHHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcC
Confidence 99999999999855432223333344456666665432 2468899999999999998755 579999999999999999
Q ss_pred CCcCcEEEeC
Q 048785 271 HATGKIILEP 280 (280)
Q Consensus 271 ~~~gkvvi~~ 280 (280)
...||+++++
T Consensus 332 ~~~gkvvi~~ 341 (341)
T cd08297 332 KIAGRVVVDF 341 (341)
T ss_pred CccceEEEeC
Confidence 9899999875
No 62
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.5e-33 Score=239.06 Aligned_cols=274 Identities=22% Similarity=0.255 Sum_probs=215.3
Q ss_pred CCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 2 VHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 2 ~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
.++|.|.+ .++||+||+.++++|++|+....|..+. ..+|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 15 ~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 91 (347)
T cd05278 15 EEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCG 91 (347)
T ss_pred EEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCC
Confidence 46788888 8999999999999999999988887653 35688999999999999999999999999998721
Q ss_pred ----------------------cCCCCCcceeEEeeccc--ccccCCCCCChhhhcccchhHHHHHHHHHhhhh------
Q 048785 76 ----------------------NHFSGGGLAEFAMVKES--LTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------ 125 (280)
Q Consensus 76 ----------------------~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------ 125 (280)
+....|+|++|++++.+ .++++|++++++++++++.+++|||+++ ...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~ 170 (347)
T cd05278 92 RCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGST 170 (347)
T ss_pred CChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCE
Confidence 01236899999999987 8999999999999999999999999997 3322
Q ss_pred ---------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCC-cc-cccCCCCCcccEEEECCCC-CCc
Q 048785 126 ---------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCARG-IPW 185 (280)
Q Consensus 126 ---------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~-~~~ 185 (280)
+|+.+|+ +|++++++ ++.+.++++|++.++++++.. .. ....+.++++|++|||+++ ..+
T Consensus 171 VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~ 250 (347)
T cd05278 171 VAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETF 250 (347)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHH
Confidence 8889997 88888754 677888899999999887655 22 2234556789999999998 568
Q ss_pred ccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEe--ccceecchhHHHH
Q 048785 186 STFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTL--IDSKHLLSKAEDA 263 (280)
Q Consensus 186 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~--~~~~~~~~~~~~a 263 (280)
..++++++++|+++.+|................++..+.+.. ....+.++++++++.++.+++. +...|+++++++|
T Consensus 251 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 329 (347)
T cd05278 251 EQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGL-VPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKA 329 (347)
T ss_pred HHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeec-cCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHH
Confidence 889999999999998874332210001111123455544433 2346789999999999999863 5678999999999
Q ss_pred HHHHhcCCC-cCcEEEeC
Q 048785 264 WAKGADGHA-TGKIILEP 280 (280)
Q Consensus 264 ~~~~~~~~~-~gkvvi~~ 280 (280)
++.+..++. .+|+++++
T Consensus 330 ~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 330 YRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred HHHHhcCCCCceEEEecC
Confidence 999988776 68998864
No 63
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=5e-33 Score=236.37 Aligned_cols=270 Identities=21% Similarity=0.313 Sum_probs=212.9
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
++++|.|.++++||+||+.++++|++|+....|..+. ..|.++|||++|+|+++|++++.+++||+|++..
T Consensus 15 ~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~----~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~ 90 (338)
T PRK09422 15 VVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD----KTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGC 90 (338)
T ss_pred EEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC----CCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCC
Confidence 3678899999999999999999999999988776532 3467899999999999999999999999998621
Q ss_pred --------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 76 --------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 76 --------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
+....|++++|+.++.+.++++|++++++++++++..++|||+++ ..++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~ 169 (338)
T PRK09422 91 GHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIY 169 (338)
T ss_pred CCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEE
Confidence 112368999999999999999999999999999999999999998 4332
Q ss_pred -----------hhhh-CCCEEEEEec-CCcHHHHHhcCCCeeecCCC-CC-cccccCCCCCccc-EEEECCCCCCccccc
Q 048785 126 -----------LAKL-GNSHVTATCG-ARNIEFVKSLGADEVLDYKT-PD-GAALKSPSGRKYD-AVIHCARGIPWSTFE 189 (280)
Q Consensus 126 -----------la~~-~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~-~~-~~~~~~~~~~~~d-~v~d~~g~~~~~~~~ 189 (280)
+|+. .|++|+++++ +++.+.++++|++.+++++. .. ...+....+ ++| +++++.++..+..++
T Consensus 170 g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~ 248 (338)
T PRK09422 170 GAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAV 248 (338)
T ss_pred CCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHH
Confidence 7776 5999999985 48899999999999988754 22 222222223 588 455555556688999
Q ss_pred ccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhc
Q 048785 190 PNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGAD 269 (280)
Q Consensus 190 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~ 269 (280)
++++++|+++.+|.... ...+....+..+..++.+.. ....+.++.+++++++|.+.+.+. .++++++++||+.+.+
T Consensus 249 ~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~ 325 (338)
T PRK09422 249 DAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSL-VGTRQDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQ 325 (338)
T ss_pred HhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEec-CCCHHHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHc
Confidence 99999999999985432 12223344455666665533 235778999999999999977655 6899999999999999
Q ss_pred CCCcCcEEEe
Q 048785 270 GHATGKIILE 279 (280)
Q Consensus 270 ~~~~gkvvi~ 279 (280)
+...||+++.
T Consensus 326 ~~~~gkvvv~ 335 (338)
T PRK09422 326 GKIQGRMVID 335 (338)
T ss_pred CCccceEEEe
Confidence 9988999885
No 64
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=5.5e-33 Score=238.56 Aligned_cols=273 Identities=18% Similarity=0.177 Sum_probs=209.5
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
++++|.|++.++||+||+.++++|++|+....|... ..+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 22 l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~ 97 (373)
T cd08299 22 IEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV----TPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCG 97 (373)
T ss_pred EEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC----CCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCC
Confidence 357889999999999999999999999999888752 256789999999999999999999999999987510
Q ss_pred ----------------------------------------CC-CCCcceeEEeecccccccCCCCCChhhhcccchhHHH
Q 048785 77 ----------------------------------------HF-SGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLT 115 (280)
Q Consensus 77 ----------------------------------------~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~ 115 (280)
+. ..|+|+||+++|.+.++++|+++++++++++++++++
T Consensus 98 ~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~t 177 (373)
T cd08299 98 KCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFST 177 (373)
T ss_pred CChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHH
Confidence 00 2589999999999999999999999999999999999
Q ss_pred HHHHHHhhhh---------------------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC---cc-cccCC
Q 048785 116 ALEALTQSAG---------------------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD---GA-ALKSP 168 (280)
Q Consensus 116 a~~~l~~~~~---------------------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~---~~-~~~~~ 168 (280)
||+++...++ +|+.+|+ +|+++++ +++.+.++++|++++++..+.+ .. ....+
T Consensus 178 a~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~ 257 (373)
T cd08299 178 GYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMT 257 (373)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHh
Confidence 9998755433 7888999 8999885 4789999999999999876533 12 22223
Q ss_pred CCCcccEEEECCCCCC-ccccccc-ccCCcEEEEeCCCchh-hHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHH
Q 048785 169 SGRKYDAVIHCARGIP-WSTFEPN-LAENGKVIDLTPTPSA-MLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLK 243 (280)
Q Consensus 169 ~~~~~d~v~d~~g~~~-~~~~~~~-l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~ 243 (280)
. +++|+++||+|++. +..++.. ++++|+++.+|..... ..++....+ .++.++.+.... ...+++.++++.+.
T Consensus 258 ~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 335 (373)
T cd08299 258 D-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLL-LTGRTWKGAVFGGWKSKDSVPKLVADYM 335 (373)
T ss_pred C-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHH-hcCCeEEEEEecCCccHHHHHHHHHHHH
Confidence 3 57999999999744 5665554 4689999999854321 222222212 245556655432 23467778888888
Q ss_pred CCCe--eEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 244 EGKI--KTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 244 ~g~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
++.+ ++.++++|+++++++||+.+.+++. .|+++++
T Consensus 336 ~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 336 AKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred cCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 7754 4567899999999999999887765 4777764
No 65
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.5e-33 Score=235.53 Aligned_cols=275 Identities=21% Similarity=0.306 Sum_probs=209.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
+++|.|.++++||+||+.++++|++|+.++.+.........+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 16 ~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 95 (341)
T PRK05396 16 TDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGH 95 (341)
T ss_pred EECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCC
Confidence 57788999999999999999999999997766421111124577899999999999999999999999998751
Q ss_pred ------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh--h----------
Q 048785 76 ------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA--G---------- 125 (280)
Q Consensus 76 ------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~--~---------- 125 (280)
+...+|+|++|+.++.+.++++|+++++++++++ ..+.++++++.... +
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~~~~~g~~vlV~~~g~ 174 (341)
T PRK05396 96 CRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALSFDLVGEDVLITGAGP 174 (341)
T ss_pred ChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHcCCCCCCeEEEECCCH
Confidence 1114689999999999999999999999888754 34445554432211 1
Q ss_pred -------hhhhCCC-EEEEEec-CCcHHHHHhcCCCeeecCCCCC-cc-cccCCCCCcccEEEECCCCC-Cccccccccc
Q 048785 126 -------LAKLGNS-HVTATCG-ARNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAVIHCARGI-PWSTFEPNLA 193 (280)
Q Consensus 126 -------la~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~ 193 (280)
+|+.+|+ +|+++++ +++.++++++|+++++++++.. .. ....+.++++|++|||+|+. .+..++++++
T Consensus 175 vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~ 254 (341)
T PRK05396 175 IGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMN 254 (341)
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHh
Confidence 8889999 6777774 4778888999999999887655 22 22345567899999999874 4788999999
Q ss_pred CCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCC-CeeEeccceecchhHHHHHHHHhcCCC
Q 048785 194 ENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEG-KIKTLIDSKHLLSKAEDAWAKGADGHA 272 (280)
Q Consensus 194 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g-~~~~~~~~~~~~~~~~~a~~~~~~~~~ 272 (280)
++|+++.+|..... ..+....+.+++.++.++......+.+..+++++.++ ++.+.+.+.++++++++|++.+.++.
T Consensus 255 ~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~- 332 (341)
T PRK05396 255 HGGRIAMLGIPPGD-MAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ- 332 (341)
T ss_pred cCCEEEEEecCCCC-CcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-
Confidence 99999999854422 2223455666777776654322344566788899998 56566778999999999999998876
Q ss_pred cCcEEEe
Q 048785 273 TGKIILE 279 (280)
Q Consensus 273 ~gkvvi~ 279 (280)
.||++++
T Consensus 333 ~gk~vv~ 339 (341)
T PRK05396 333 SGKVILD 339 (341)
T ss_pred CceEEEe
Confidence 7999985
No 66
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.5e-32 Score=233.51 Aligned_cols=277 Identities=23% Similarity=0.257 Sum_probs=210.4
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
+++.|.|.++++||+||+.++++|+.|+.++.+.........+|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 13 l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 92 (340)
T TIGR00692 13 LTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCG 92 (340)
T ss_pred EEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCC
Confidence 3578889999999999999999999999877654211111235678999999999999999999999999987310
Q ss_pred --------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 77 --------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 77 --------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
....|+|++|+.++.+.++++|++++++++ +++..+.+|++++.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~~~~~~g~~vlI~~~g 171 (340)
T TIGR00692 93 KCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVLAGPISGKSVLVTGAG 171 (340)
T ss_pred CChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHHccCCCCCEEEEECCC
Confidence 114689999999999999999999998654 566777788887632211
Q ss_pred --------hhhhCCCE-EEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCC-Ccccccccc
Q 048785 126 --------LAKLGNSH-VTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGI-PWSTFEPNL 192 (280)
Q Consensus 126 --------la~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l 192 (280)
+|+.+|++ |++++++ ++.+.++++|++.+++++... ......+.++++|++|||+|+. .+..+++++
T Consensus 172 ~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l 251 (340)
T TIGR00692 172 PIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAV 251 (340)
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhh
Confidence 88899996 8888654 678888899998888876554 2223345567899999998864 578889999
Q ss_pred cCCcEEEEeCCCchhhHHH-HHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee--EeccceecchhHHHHHHHHhc
Q 048785 193 AENGKVIDLTPTPSAMLTF-AWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK--TLIDSKHLLSKAEDAWAKGAD 269 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~--~~~~~~~~~~~~~~a~~~~~~ 269 (280)
+++|+++.+|..... ..+ ....+.+++.++.+.......+.+.++++++++++++ +.+.+.+++++++++++.+.+
T Consensus 252 ~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~ 330 (340)
T TIGR00692 252 TPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRS 330 (340)
T ss_pred cCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhc
Confidence 999999999854321 111 1224455666666544333445678899999999986 556789999999999999988
Q ss_pred CCCcCcEEEeC
Q 048785 270 GHATGKIILEP 280 (280)
Q Consensus 270 ~~~~gkvvi~~ 280 (280)
+.. ||+++.+
T Consensus 331 ~~~-gkvvv~~ 340 (340)
T TIGR00692 331 GQT-GKVILSL 340 (340)
T ss_pred CCC-ceEEEeC
Confidence 874 9999864
No 67
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-32 Score=234.31 Aligned_cols=274 Identities=24% Similarity=0.285 Sum_probs=211.0
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
++++|.|.+.++||+|++.++++|+.|+....+.........+|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 12 ~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 91 (343)
T cd05285 12 LEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCR 91 (343)
T ss_pred EEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCC
Confidence 356788889999999999999999999987643211111123567899999999999999999999999998621
Q ss_pred -------------------c-CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 76 -------------------N-HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 76 -------------------~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
+ ....|+|++|+.++++.++++|+++++++++++ ..+.+||+++ ..++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~ 169 (343)
T cd05285 92 TCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVF 169 (343)
T ss_pred CChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEE
Confidence 1 113689999999999999999999999999877 4667898887 3332
Q ss_pred -----------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCCc-----ccccCCCCCcccEEEECCCCC-Ccc
Q 048785 126 -----------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPDG-----AALKSPSGRKYDAVIHCARGI-PWS 186 (280)
Q Consensus 126 -----------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~-----~~~~~~~~~~~d~v~d~~g~~-~~~ 186 (280)
+|+.+|++ |+++++ +++.++++++|++++++++.... .....+.++++|++|||+|+. .++
T Consensus 170 g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~ 249 (343)
T cd05285 170 GAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQ 249 (343)
T ss_pred CCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHH
Confidence 88999996 888875 47788888899999998776542 233445667899999999986 688
Q ss_pred cccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee--EeccceecchhHHHHH
Q 048785 187 TFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK--TLIDSKHLLSKAEDAW 264 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~--~~~~~~~~~~~~~~a~ 264 (280)
.++++++++|+++.+|..... ..+......+++..+.+... ..+.++.++++++++.+. +.+.++|+++++.+|+
T Consensus 250 ~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~ 326 (343)
T cd05285 250 TAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFR--YANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAF 326 (343)
T ss_pred HHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEecc--ChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHH
Confidence 899999999999998754322 12222345556666666543 347788999999999865 4566789999999999
Q ss_pred HHHhcCC-CcCcEEEe
Q 048785 265 AKGADGH-ATGKIILE 279 (280)
Q Consensus 265 ~~~~~~~-~~gkvvi~ 279 (280)
+.+.+++ ..+|++|.
T Consensus 327 ~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 327 ETAAKGKKGVIKVVIE 342 (343)
T ss_pred HHHHcCCCCeeEEEEe
Confidence 9998874 45899873
No 68
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.3e-32 Score=231.84 Aligned_cols=273 Identities=27% Similarity=0.368 Sum_probs=214.7
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
++.+.|.+.++||+||+.++++|+.|+....|..+. ....|.++|+|++|+|+++|++++.+++||+|+++. ..|
T Consensus 19 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---~~g 93 (334)
T PTZ00354 19 GESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL---PGG 93 (334)
T ss_pred EeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec---CCC
Confidence 355667789999999999999999999988776532 124467899999999999999999999999999874 358
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
+|++|+.++.+.++++|+++++.+++.++.++.+||+++..... +|+.+|++++.+++
T Consensus 94 ~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~ 173 (334)
T PTZ00354 94 GYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS 173 (334)
T ss_pred ceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999999999999999999866432 88899998776665
Q ss_pred -CCcHHHHHhcCCCeeecCCCCC---cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHH-HHHh
Q 048785 140 -ARNIEFVKSLGADEVLDYKTPD---GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLT-FAWQ 214 (280)
Q Consensus 140 -~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~-~~~~ 214 (280)
+++.+.+.++|.+.+++++..+ ......+.++++|++|||+++..+..++++++++|+++.++........ +...
T Consensus 174 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~ 253 (334)
T PTZ00354 174 SEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLL 253 (334)
T ss_pred CHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCcccccCHH
Confidence 4788888889998888875532 2233345567899999999988888999999999999998743322211 2223
Q ss_pred hhhccceeeEEEEEcC--C-------HHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 215 KLTFSKKQLVPLLVIP--K-------GENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 215 ~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
.+..++..+.+..... . .+.++.++++++++.+.+.+.+.+++++++++++.+.+++..+|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~ 327 (334)
T PTZ00354 254 PLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLT 327 (334)
T ss_pred HHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 3333444444433211 0 134577889999999988778899999999999999988888999885
No 69
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=7.4e-33 Score=234.95 Aligned_cols=271 Identities=27% Similarity=0.325 Sum_probs=215.8
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
++++|.|.++++|++|++.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~ 91 (334)
T PRK13771 15 IEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDG 91 (334)
T ss_pred EEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCc
Confidence 3578899999999999999999999999988776542 255788999999999999999988999999988520
Q ss_pred --------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 77 --------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 77 --------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++... +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g 170 (334)
T PRK13771 92 TCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTG 170 (334)
T ss_pred CChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEEC
Confidence 11268999999999999999999999999999999999999998553 3
Q ss_pred -----------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCccccccccc
Q 048785 126 -----------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLA 193 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~ 193 (280)
+++.+|++|+++++ +++.+.++++ +++++++++....... . + ++|++|||+|+..+..++++++
T Consensus 171 ~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~-~-~-~~d~~ld~~g~~~~~~~~~~l~ 246 (334)
T PRK13771 171 AGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKK-I-G-GADIVIETVGTPTLEESLRSLN 246 (334)
T ss_pred CCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHh-c-C-CCcEEEEcCChHHHHHHHHHHh
Confidence 88999999998886 4778888878 7777766521122222 2 2 6999999999988889999999
Q ss_pred CCcEEEEeCCCchhhH-HHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCC
Q 048785 194 ENGKVIDLTPTPSAML-TFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHA 272 (280)
Q Consensus 194 ~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~ 272 (280)
++|+++.+|....... .........++.++.+.. ...+++++.++++++++.+++.+.+.|+++++++||+.+.++..
T Consensus 247 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~ 325 (334)
T PRK13771 247 MGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHI-SATKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSR 325 (334)
T ss_pred cCCEEEEEeccCCCCCcccCHHHHHhcccEEEEec-CCCHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCC
Confidence 9999999985432111 111222234555665543 34678899999999999998878889999999999999998888
Q ss_pred cCcEEEeC
Q 048785 273 TGKIILEP 280 (280)
Q Consensus 273 ~gkvvi~~ 280 (280)
.+|+++.+
T Consensus 326 ~~kvv~~~ 333 (334)
T PRK13771 326 IGKILVKP 333 (334)
T ss_pred cceEEEec
Confidence 89999864
No 70
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.2e-32 Score=235.02 Aligned_cols=273 Identities=22% Similarity=0.307 Sum_probs=210.8
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCC------CCCCCCccccccceEEEEEeCCCCC--CCCCCCEEE
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI------LPRKFPYIPATDVAGEIIEVGSEVK--NFKAGYNVV 72 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~------~~~~~p~~~G~e~~G~V~~vG~~v~--~~~~Gd~V~ 72 (280)
+++++.|+++++||+||+.++++|+.|+....|..... ....+|.++|||++|+|+++|++++ ++++||+|+
T Consensus 14 ~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~ 93 (350)
T cd08256 14 LEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVI 93 (350)
T ss_pred EEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEE
Confidence 35788899999999999999999999999887753110 0014577899999999999999999 899999998
Q ss_pred Ee--------------------------ecCCCCCcceeEEeeccc-ccccCCCCCChhhhcccchhHHHHHHHHHhhhh
Q 048785 73 AI--------------------------LNHFSGGGLAEFAMVKES-LTASRPLEVSAAEGAGLPLAGLTALEALTQSAG 125 (280)
Q Consensus 73 ~~--------------------------~~~~~~g~~~~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~ 125 (280)
+. ......|+|++|+.++++ .++++|+++++++++++ ..++|+|+++ ..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~ 171 (350)
T cd08256 94 SEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRAN 171 (350)
T ss_pred ECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcC
Confidence 72 101136899999999988 57899999999999988 7888999997 4333
Q ss_pred ---------------------hhhhCCCE-EEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECC
Q 048785 126 ---------------------LAKLGNSH-VTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCA 180 (280)
Q Consensus 126 ---------------------la~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~ 180 (280)
+|+.+|++ +++++++ ++.+.++++|++.+++++... ......+.++++|++|||+
T Consensus 172 ~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~ 251 (350)
T cd08256 172 IKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEAT 251 (350)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECC
Confidence 88999984 6666654 677888899999998876544 2233445667899999999
Q ss_pred CCC-CcccccccccCCcEEEEeCCCchhhHHHHHhhh-hccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceec
Q 048785 181 RGI-PWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKL-TFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHL 256 (280)
Q Consensus 181 g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~ 256 (280)
|+. .+..++++++++|+++.+|..... ..+.+..+ ..+++.+.+... ....+.++++++++|.+++ .+.++|+
T Consensus 252 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 328 (350)
T cd08256 252 GHPSAVEQGLNMIRKLGRFVEFSVFGDP-VTVDWSIIGDRKELDVLGSHL--GPYCYPIAIDLIASGRLPTDGIVTHQFP 328 (350)
T ss_pred CChHHHHHHHHHhhcCCEEEEEccCCCC-CccChhHhhcccccEEEEecc--CchhHHHHHHHHHcCCCChhHheEEEeE
Confidence 964 578899999999999998743321 11222222 234555555432 3456888999999999986 3678999
Q ss_pred chhHHHHHHHHhcCCCcCcEEE
Q 048785 257 LSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 257 ~~~~~~a~~~~~~~~~~gkvvi 278 (280)
++++++|++.+.+++..+|+++
T Consensus 329 l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 329 LEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHHHHHHHHHhCCCceEEeC
Confidence 9999999999999888888874
No 71
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.3e-32 Score=232.42 Aligned_cols=274 Identities=22% Similarity=0.270 Sum_probs=209.9
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHh-ccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKK-GVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL---- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---- 75 (280)
++++|.|.++++||+||+.++++|++|+...+ |.... ....+|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 11 ~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~-~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~ 89 (339)
T cd08232 11 VEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGT-VRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPC 89 (339)
T ss_pred EEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCc-ccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcC
Confidence 35778899999999999999999999998763 33211 1224577999999999999999999999999998621
Q ss_pred --------------------c-----CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----
Q 048785 76 --------------------N-----HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----- 125 (280)
Q Consensus 76 --------------------~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----- 125 (280)
+ ....|+|++|+.++.+.++++|+++++++++. +.++++||+++.....
T Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~~~~~ 168 (339)
T cd08232 90 GTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDLAGKR 168 (339)
T ss_pred CCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCCCCCE
Confidence 0 01368999999999999999999999998876 5677799998854321
Q ss_pred ---------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-CCccc
Q 048785 126 ---------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-IPWST 187 (280)
Q Consensus 126 ---------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~ 187 (280)
+|+.+|+ +|++++++ ++.++++++|+++++++++...... ....+++|++|||+|+ ..+..
T Consensus 169 VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~-~~~~~~vd~vld~~g~~~~~~~ 247 (339)
T cd08232 169 VLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAY-AADKGDFDVVFEASGAPAALAS 247 (339)
T ss_pred EEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhh-hccCCCccEEEECCCCHHHHHH
Confidence 8889999 88888864 6677888899999998765431111 1233469999999996 45788
Q ss_pred ccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHH
Q 048785 188 FEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWA 265 (280)
Q Consensus 188 ~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~ 265 (280)
++++|+++|+++.++..... .......+..++.++.+.. ...+.++++++++++|.+++ .+.++|+++++++|++
T Consensus 248 ~~~~L~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~ 324 (339)
T cd08232 248 ALRVVRPGGTVVQVGMLGGP-VPLPLNALVAKELDLRGSF--RFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFA 324 (339)
T ss_pred HHHHHhcCCEEEEEecCCCC-ccCcHHHHhhcceEEEEEe--cCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHH
Confidence 99999999999998743311 1111222344666665544 24667889999999998863 4678899999999999
Q ss_pred HHhcCCCcCcEEEeC
Q 048785 266 KGADGHATGKIILEP 280 (280)
Q Consensus 266 ~~~~~~~~gkvvi~~ 280 (280)
.+.++...||+|+++
T Consensus 325 ~~~~~~~~gkvvv~~ 339 (339)
T cd08232 325 LAADRTRSVKVQLSF 339 (339)
T ss_pred HHHhCCCceeEEEeC
Confidence 999888889999864
No 72
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.9e-32 Score=232.70 Aligned_cols=271 Identities=23% Similarity=0.324 Sum_probs=212.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
+++|.|.++++||+|++.++++|+.|+....|..+. ..+|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~ 91 (337)
T cd08261 15 VDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGE 91 (337)
T ss_pred EECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCC
Confidence 577889999999999999999999999988776542 245778999999999999999999999999987310
Q ss_pred -------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 77 -------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 77 -------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
....|+|++|+.++++ ++++|+++++++++++ ..++++++++ ...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~ 168 (337)
T cd08261 92 CYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGA 168 (337)
T ss_pred ChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECC
Confidence 1136899999999999 9999999999999877 4566888776 3322
Q ss_pred ---------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCC-CCcccccccc
Q 048785 126 ---------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARG-IPWSTFEPNL 192 (280)
Q Consensus 126 ---------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l 192 (280)
+|+.+|++|+++++ +++.++++++|++++++++... ......+.++++|++|||+|+ ..+..+++++
T Consensus 169 g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l 248 (337)
T cd08261 169 GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELV 248 (337)
T ss_pred CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHH
Confidence 88999999998875 5778888899999999887655 223334556679999999987 4578889999
Q ss_pred cCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHHhcC
Q 048785 193 AENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKGADG 270 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~~~~ 270 (280)
+++|+++.++..... ..+....+..++..+.+.. ....+.++.+++++++|.+++ .+...+++++++++++.+.++
T Consensus 249 ~~~G~~i~~g~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~ 326 (337)
T cd08261 249 AHGGRVVLVGLSKGP-VTFPDPEFHKKELTILGSR-NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAP 326 (337)
T ss_pred hcCCEEEEEcCCCCC-CccCHHHHHhCCCEEEEec-cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcC
Confidence 999999988744321 1111222333444444432 345678899999999999987 677899999999999999988
Q ss_pred -CCcCcEEEeC
Q 048785 271 -HATGKIILEP 280 (280)
Q Consensus 271 -~~~gkvvi~~ 280 (280)
...+|+|+++
T Consensus 327 ~~~~~k~v~~~ 337 (337)
T cd08261 327 PGGVIKVLIEF 337 (337)
T ss_pred CCceEEEEEeC
Confidence 4778999864
No 73
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.5e-32 Score=231.98 Aligned_cols=274 Identities=25% Similarity=0.342 Sum_probs=221.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEe-------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI------- 74 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------- 74 (280)
.+.|.|.+++++|+|++.++++|+.|.....|..+. ...+|.++|+|++|+|+++|++++.+++||+|++.
T Consensus 17 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~ 94 (338)
T cd08254 17 EEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGA 94 (338)
T ss_pred eccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCC
Confidence 456788889999999999999999999988887641 23457789999999999999999999999999861
Q ss_pred -----------e------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 75 -----------L------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 75 -----------~------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
. +....|+|++|+.++.+.++++|++++++++++++..+.+||+++.....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~ 174 (338)
T cd08254 95 CALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGL 174 (338)
T ss_pred ChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC
Confidence 0 01135899999999999999999999999999999999999999865432
Q ss_pred ---------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCC-Cccccccccc
Q 048785 126 ---------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGI-PWSTFEPNLA 193 (280)
Q Consensus 126 ---------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~ 193 (280)
+|+.+|++|++++++ ++.+.++++|.++++++++.. ...+..+.++++|+++||+|.. .+..++++++
T Consensus 175 g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~ 254 (338)
T cd08254 175 GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVK 254 (338)
T ss_pred cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhh
Confidence 888899999988864 778888889998888876544 2222445667899999999864 5888999999
Q ss_pred CCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCc
Q 048785 194 ENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHAT 273 (280)
Q Consensus 194 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 273 (280)
++|+++.++..... ..+....+..++.++.+.. ....+.+..++++++++.+.+. .+.+++++++++++.+.+++..
T Consensus 255 ~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~ 331 (338)
T cd08254 255 PGGRIVVVGLGRDK-LTVDLSDLIARELRIIGSF-GGTPEDLPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVK 331 (338)
T ss_pred cCCEEEEECCCCCC-CccCHHHHhhCccEEEEec-cCCHHHHHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCcc
Confidence 99999998754321 2223344455666666543 3457889999999999999876 6789999999999999999999
Q ss_pred CcEEEeC
Q 048785 274 GKIILEP 280 (280)
Q Consensus 274 gkvvi~~ 280 (280)
+|+++++
T Consensus 332 ~kvv~~~ 338 (338)
T cd08254 332 GRVVLVP 338 (338)
T ss_pred ceEEEeC
Confidence 9999875
No 74
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.3e-32 Score=232.69 Aligned_cols=275 Identities=20% Similarity=0.266 Sum_probs=205.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee---cCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL---NHF 78 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~~ 78 (280)
+++|.|.++++||+||+.++++|++|.....+... ....+|.++|||++|+|+++| ++.+++||+|++.. +..
T Consensus 18 ~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~~~~~ 93 (326)
T cd08289 18 KNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK--IVKRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYDLGVS 93 (326)
T ss_pred EEccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc--ccCCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccccCCC
Confidence 57788889999999999999999999876543211 112457899999999999954 56799999998762 112
Q ss_pred CCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh-------h------------------hhhhCCCE
Q 048785 79 SGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA-------G------------------LAKLGNSH 133 (280)
Q Consensus 79 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~-------~------------------la~~~G~~ 133 (280)
..|+|++|+.++.+.++++|+++++++++.+++++.|||+++.... + +|+.+|++
T Consensus 94 ~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~ 173 (326)
T cd08289 94 HHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYE 173 (326)
T ss_pred CCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCe
Confidence 3699999999999999999999999999999999999998874321 1 88999999
Q ss_pred EEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHH
Q 048785 134 VTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFA 212 (280)
Q Consensus 134 Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 212 (280)
|+++++ +++.+.++++|++.++++++.....+....++++|++|||+|+..+..++++++++|+++.+|.......+..
T Consensus 174 v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~ 253 (326)
T cd08289 174 VVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGGEVETT 253 (326)
T ss_pred EEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCCCCCcc
Confidence 999885 5788999999999998876543222222245679999999999888899999999999999985433222222
Q ss_pred HhhhhccceeeEEEEEcC-----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 213 WQKLTFSKKQLVPLLVIP-----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
...+..++..+.+..... ..+.+..+.+.+....+.+.+.++|+++++++||+.+.++...+|+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 254 VFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred hhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 333445666666653211 11223333333332333345678999999999999999999999999874
No 75
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.4e-32 Score=233.50 Aligned_cols=274 Identities=32% Similarity=0.443 Sum_probs=214.8
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
++++|.|.++++||+|++.++++|++|+....+... ..+|.++|+|++|+|+.+|++++.+++||+|+++..
T Consensus 16 ~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~ 91 (339)
T cd08249 16 VVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI----PSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP 91 (339)
T ss_pred ccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc----cCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC
Confidence 358899999999999999999999999987655431 135678999999999999999999999999998742
Q ss_pred -CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh--------------h----------------
Q 048785 77 -HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA--------------G---------------- 125 (280)
Q Consensus 77 -~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~--------------~---------------- 125 (280)
...+|+|++|+.++.+.++++|+++++++++++++.+.+||+++.... +
T Consensus 92 ~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~ 171 (339)
T cd08249 92 NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLA 171 (339)
T ss_pred CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHH
Confidence 123589999999999999999999999999999999999999985431 1
Q ss_pred --hhhhCCCEEEEEecCCcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCC-CCcccccccccC--CcEEE
Q 048785 126 --LAKLGNSHVTATCGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARG-IPWSTFEPNLAE--NGKVI 199 (280)
Q Consensus 126 --la~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~--~g~~v 199 (280)
+|+.+|++|++++++++.+.++++|++++++++... ...+....++++|++||++|+ ..+..+++++++ +|+++
T Consensus 172 ~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v 251 (339)
T cd08249 172 IQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLV 251 (339)
T ss_pred HHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEE
Confidence 888999999988877889999999999999887655 222333345779999999998 678899999999 99999
Q ss_pred EeCCCchhhHHHHHhhhhccceeeEEEE------EcCCHHHHHHHHHHHHCCCeeEeccceec--chhHHHHHHHHhcCC
Q 048785 200 DLTPTPSAMLTFAWQKLTFSKKQLVPLL------VIPKGENLVFLVKLLKEGKIKTLIDSKHL--LSKAEDAWAKGADGH 271 (280)
Q Consensus 200 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~g~~~~~~~~~~~--~~~~~~a~~~~~~~~ 271 (280)
.++...... ................. .......++.++++++++++.+.....++ ++++++|++.+.+++
T Consensus 252 ~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 329 (339)
T cd08249 252 SLLPVPEET--EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGK 329 (339)
T ss_pred EecCCCccc--cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCC
Confidence 998554322 00111111222111111 11223567788999999999876656777 999999999999988
Q ss_pred -CcCcEEEeC
Q 048785 272 -ATGKIILEP 280 (280)
Q Consensus 272 -~~gkvvi~~ 280 (280)
..+|+|+++
T Consensus 330 ~~~~kvvv~~ 339 (339)
T cd08249 330 VSGEKLVVRL 339 (339)
T ss_pred ccceEEEEeC
Confidence 889999874
No 76
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.7e-32 Score=235.12 Aligned_cols=272 Identities=21% Similarity=0.264 Sum_probs=214.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
+++|.|.++++||+|++.++++|+.|+....|..+ ..+|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 16 ~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 91 (363)
T cd08279 16 EEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGT 91 (363)
T ss_pred EEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCC
Confidence 57788999999999999999999999998887654 256779999999999999999999999999987310
Q ss_pred ---------------------------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHH
Q 048785 77 ---------------------------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTAL 117 (280)
Q Consensus 77 ---------------------------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~ 117 (280)
....|+|++|+.++.+.++++|+++++++++++++++.+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~ 171 (363)
T cd08279 92 CRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGV 171 (363)
T ss_pred ChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHH
Confidence 01358999999999999999999999999999999999999
Q ss_pred HHHHhhhh---------------------hhhhCCCE-EEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCc
Q 048785 118 EALTQSAG---------------------LAKLGNSH-VTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRK 172 (280)
Q Consensus 118 ~~l~~~~~---------------------la~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~ 172 (280)
.++....+ +|+.+|++ |++++++ ++.+.++++|++++++++... ......+.+++
T Consensus 172 ~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~ 251 (363)
T cd08279 172 GAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRG 251 (363)
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCC
Confidence 98765433 88899995 8888864 778888889999999877654 22333445677
Q ss_pred ccEEEECCCC-CCcccccccccCCcEEEEeCCCch-hhHHHHHhhhhccceeeEEEEEc--CCHHHHHHHHHHHHCCCee
Q 048785 173 YDAVIHCARG-IPWSTFEPNLAENGKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLVI--PKGENLVFLVKLLKEGKIK 248 (280)
Q Consensus 173 ~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~g~~~ 248 (280)
+|++|||+++ ..+..++++++++|+++.++.... ....+....+..++..+.+.... ...+.++++++++++++++
T Consensus 252 vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~ 331 (363)
T cd08279 252 ADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLK 331 (363)
T ss_pred CCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCC
Confidence 9999999995 457889999999999999875432 22233333333344444443321 3467899999999999987
Q ss_pred E--eccceecchhHHHHHHHHhcCCCcCcEE
Q 048785 249 T--LIDSKHLLSKAEDAWAKGADGHATGKII 277 (280)
Q Consensus 249 ~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv 277 (280)
+ .+.++|+++++++||+.+.+++..+.++
T Consensus 332 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 332 LDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 5 4678899999999999999887765544
No 77
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.3e-32 Score=232.98 Aligned_cols=274 Identities=22% Similarity=0.250 Sum_probs=213.7
Q ss_pred CCCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec---
Q 048785 1 HVHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN--- 76 (280)
Q Consensus 1 ~~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--- 76 (280)
++++|.|+| .++||+|++.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 14 ~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~ 90 (345)
T cd08286 14 WEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSC 90 (345)
T ss_pred EEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccCCCCEEEECCcCCC
Confidence 357788885 7999999999999999999998887643 245789999999999999999999999999987421
Q ss_pred ----------------------CCCCCcceeEEeeccc--ccccCCCCCChhhhcccchhHHHHHHHHHhhhh-------
Q 048785 77 ----------------------HFSGGGLAEFAMVKES--LTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------- 125 (280)
Q Consensus 77 ----------------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------- 125 (280)
....|++++|+.++.+ .++++|+++++.+++.++..+++||.++....+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~v 170 (345)
T cd08286 91 GTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTV 170 (345)
T ss_pred CCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEE
Confidence 1124899999999987 899999999999999999999999987644322
Q ss_pred --------------hhhhCC-CEEEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCC-Ccc
Q 048785 126 --------------LAKLGN-SHVTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGI-PWS 186 (280)
Q Consensus 126 --------------la~~~G-~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~ 186 (280)
+|+.+| .+|++++++ ++.+.++++|++.+++++... ......+.++++|++|||+|+. .+.
T Consensus 171 lI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~ 250 (345)
T cd08286 171 AIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFE 250 (345)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHH
Confidence 889999 688887754 677888899999999887654 2233445667899999999864 477
Q ss_pred cccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHH
Q 048785 187 TFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAW 264 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~ 264 (280)
.+++.++++|+++.+|..... ..+....+..++.++.+... ..+.+..++++++++.+++ ++.++|+++++++|+
T Consensus 251 ~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~ 327 (345)
T cd08286 251 LCQELVAPGGHIANVGVHGKP-VDLHLEKLWIKNITITTGLV--DTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAY 327 (345)
T ss_pred HHHHhccCCcEEEEecccCCC-CCcCHHHHhhcCcEEEeecC--chhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHH
Confidence 888999999999998854321 22233333445666655332 3367888999999999865 467899999999999
Q ss_pred HHHhcCC--CcCcEEEeC
Q 048785 265 AKGADGH--ATGKIILEP 280 (280)
Q Consensus 265 ~~~~~~~--~~gkvvi~~ 280 (280)
+.+.+.. ...|++|++
T Consensus 328 ~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 328 DTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHHhccCCCCeeEEEEeC
Confidence 9988653 345888875
No 78
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.2e-32 Score=229.82 Aligned_cols=276 Identities=32% Similarity=0.409 Sum_probs=223.7
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
++.+.|.++++|++|++.++++|++|+....|..+. ....|.++|||++|+|+++|+++.++++||+|++...
T Consensus 18 ~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~ 95 (336)
T cd08276 18 VEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP--PVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLD 95 (336)
T ss_pred EeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccc
Confidence 356677789999999999999999999988776542 1235778999999999999999999999999988531
Q ss_pred -------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------------
Q 048785 77 -------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------------ 125 (280)
Q Consensus 77 -------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------------ 125 (280)
....|+|++|+.++.+.++++|+++++.+++.+++.+++||+++.....
T Consensus 96 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~ 175 (336)
T cd08276 96 GPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLF 175 (336)
T ss_pred ccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHH
Confidence 1126889999999999999999999999999999999999999865432
Q ss_pred ---hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCC-CC-cc-cccCCCCCcccEEEECCCCCCcccccccccCCcEE
Q 048785 126 ---LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKT-PD-GA-ALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKV 198 (280)
Q Consensus 126 ---la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~-~~-~~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~ 198 (280)
+++..|++|++++++ ++.+.+.++|.+.+++.+. .. .. ....++++++|++|||+++..+..++++++++|++
T Consensus 176 ~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~ 255 (336)
T cd08276 176 ALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVI 255 (336)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEE
Confidence 888999999998865 7788888899999988766 43 22 33445667899999999988888999999999999
Q ss_pred EEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 199 IDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 199 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
+.+|................++..+.+... ...+.+++++++++++.+.+.....|++++++++++.+.+++..+|+++
T Consensus 256 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 334 (336)
T cd08276 256 SLIGFLSGFEAPVLLLPLLTKGATLRGIAV-GSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVI 334 (336)
T ss_pred EEEccCCCCccCcCHHHHhhcceEEEEEec-CcHHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEE
Confidence 999854432222233344556777776653 3577889999999999988777789999999999999998888889998
Q ss_pred eC
Q 048785 279 EP 280 (280)
Q Consensus 279 ~~ 280 (280)
++
T Consensus 335 ~~ 336 (336)
T cd08276 335 RV 336 (336)
T ss_pred eC
Confidence 64
No 79
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.6e-32 Score=234.81 Aligned_cols=270 Identities=21% Similarity=0.228 Sum_probs=210.5
Q ss_pred CCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 2 VHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 2 ~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
+++|+|.+ +++||+||+.++++|++|+....|..+ ..+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g 90 (375)
T cd08282 15 EDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACG 90 (375)
T ss_pred EeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCC
Confidence 57888885 799999999999999999999888764 246789999999999999999999999999986211
Q ss_pred ------------------------------CCCCCcceeEEeeccc--ccccCCCCCChh---hhcccchhHHHHHHHHH
Q 048785 77 ------------------------------HFSGGGLAEFAMVKES--LTASRPLEVSAA---EGAGLPLAGLTALEALT 121 (280)
Q Consensus 77 ------------------------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~~---~aa~~~~~~~~a~~~l~ 121 (280)
...+|+|++|+.+|.+ .++++|++++++ ++++++..+++||+++
T Consensus 91 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~- 169 (375)
T cd08282 91 RCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL- 169 (375)
T ss_pred CCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-
Confidence 0124899999999976 899999999998 5677888888999998
Q ss_pred hhhh---------------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCC-cc-cccCCCCCcccEE
Q 048785 122 QSAG---------------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPD-GA-ALKSPSGRKYDAV 176 (280)
Q Consensus 122 ~~~~---------------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~-~~~~~~~~~~d~v 176 (280)
..++ +|+..|+ +|++++++ ++.+.++++|+. .+++++.. .. ....+. +++|++
T Consensus 170 ~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~i~~~~~-~~~d~v 247 (375)
T cd08282 170 ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGDPVEQILGLEP-GGVDRA 247 (375)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCcccHHHHHHHhhC-CCCCEE
Confidence 4433 8889998 89887754 788888999984 56665544 22 223333 679999
Q ss_pred EECCCCCC------------cccccccccCCcEEEEeCCCchh------------hHHHHHhhhhccceeeEEEEEcCCH
Q 048785 177 IHCARGIP------------WSTFEPNLAENGKVIDLTPTPSA------------MLTFAWQKLTFSKKQLVPLLVIPKG 232 (280)
Q Consensus 177 ~d~~g~~~------------~~~~~~~l~~~g~~v~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (280)
|||+|+.. +..++++++++|+++.+|..... ...+....++.++..+.+.. ....
T Consensus 248 ~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 326 (375)
T cd08282 248 VDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQ-APVK 326 (375)
T ss_pred EECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEec-CCch
Confidence 99999874 67889999999999877643211 12233344444555544432 3356
Q ss_pred HHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 233 ENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 233 ~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
+.++.++++++++++++ ++.+.|+++++++|++.+.+++ .+|+|+++
T Consensus 327 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 327 KYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred hhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 78899999999999986 4789999999999999999888 88999864
No 80
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.9e-32 Score=232.16 Aligned_cols=270 Identities=28% Similarity=0.348 Sum_probs=215.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
+++|.|.+.++||+|++.++++|++|+....|..+. ...|.++|+|++|+|+++|++++.+++||+|+++..
T Consensus 16 ~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~ 92 (332)
T cd08259 16 EEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGK 92 (332)
T ss_pred EEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcC
Confidence 577888999999999999999999999988886542 245789999999999999999999999999998631
Q ss_pred -------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 77 -------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 77 -------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
....|++++|+.++.+.++++|++++++++++++.++.+||+++.. ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga 171 (332)
T cd08259 93 CEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGA 171 (332)
T ss_pred ChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECC
Confidence 1126899999999999999999999999999999999999999865 33
Q ss_pred ----------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccC
Q 048785 126 ----------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAE 194 (280)
Q Consensus 126 ----------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~ 194 (280)
+++..|++|++++++ ++.+.+.++|.+.+++.++ ....+.... ++|++++|+|......+++++++
T Consensus 172 ~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~d~v~~~~g~~~~~~~~~~~~~ 248 (332)
T cd08259 172 GGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK-FSEDVKKLG--GADVVIELVGSPTIEESLRSLNK 248 (332)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH-HHHHHHhcc--CCCEEEECCChHHHHHHHHHhhc
Confidence 778889999988864 6778888888888876554 212222122 69999999998888889999999
Q ss_pred CcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcC
Q 048785 195 NGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATG 274 (280)
Q Consensus 195 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~g 274 (280)
+|+++.++........+......+++..+.+.. ....++++++++++++|.+++.+.+.|+++++++||+.+.++...+
T Consensus 249 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~ 327 (332)
T cd08259 249 GGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSI-SATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVG 327 (332)
T ss_pred CCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEec-CCCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCccc
Confidence 999998875432211111111223444444432 3467788999999999999888888999999999999999998889
Q ss_pred cEEEe
Q 048785 275 KIILE 279 (280)
Q Consensus 275 kvvi~ 279 (280)
|++++
T Consensus 328 kvv~~ 332 (332)
T cd08259 328 RIVLK 332 (332)
T ss_pred EEEeC
Confidence 99874
No 81
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.5e-31 Score=224.00 Aligned_cols=275 Identities=40% Similarity=0.616 Sum_probs=212.8
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
+++.|.|+++++||+|++.++++|++|+....|..+......+|..+|||++|+|+++|++++++++||+|++.......
T Consensus 16 ~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~ 95 (319)
T cd08267 16 EVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGG 95 (319)
T ss_pred cccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCCCC
Confidence 35778888999999999999999999999887765321122456789999999999999999999999999987422235
Q ss_pred CcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEe
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATC 138 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~ 138 (280)
|+|++++.++.+.++++|+++++++++.+++.+.+||+++..... +|+.+|++|++++
T Consensus 96 g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~ 175 (319)
T cd08267 96 GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVC 175 (319)
T ss_pred ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 899999999999999999999999999999999999999866532 8889999999988
Q ss_pred cCCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC--cccccccccCCcEEEEeCCCchhhHHH-----
Q 048785 139 GARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP--WSTFEPNLAENGKVIDLTPTPSAMLTF----- 211 (280)
Q Consensus 139 ~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~----- 211 (280)
++++.+.++++|.+++++.+..... ...+.++++|++++|+++.. .......++++|+++.+|.........
T Consensus 176 ~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~ 254 (319)
T cd08267 176 STRNAELVRSLGADEVIDYTTEDFV-ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLP 254 (319)
T ss_pred CHHHHHHHHHcCCCEeecCCCCCcc-hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccc
Confidence 6677888889999888876654433 44456678999999999533 333333499999999998543221111
Q ss_pred HHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 212 AWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
.......... .........+.+.+++++++++++.+.+.+.|+++++++|++.+.++...+|+++
T Consensus 255 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 255 LTLGGGGRRL--KFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred hhhccccceE--EEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 1111111222 2222233478899999999999999888899999999999999998887788874
No 82
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.4e-32 Score=235.61 Aligned_cols=270 Identities=19% Similarity=0.209 Sum_probs=214.1
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
+++|.|.++++||+|++.++++|++|+....|... ..+|.++|||++|+|+++|++++.+++||+|++...
T Consensus 16 ~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~ 91 (365)
T cd05279 16 EEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGK 91 (365)
T ss_pred EEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCC
Confidence 57788999999999999999999999998888653 245789999999999999999999999999987521
Q ss_pred ---------------------------------------C-CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHH
Q 048785 77 ---------------------------------------H-FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTA 116 (280)
Q Consensus 77 ---------------------------------------~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a 116 (280)
+ ...|+|++|+.++.+.++++|+++++++++++++++.+|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta 171 (365)
T cd05279 92 CKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTG 171 (365)
T ss_pred ChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHH
Confidence 0 023789999999999999999999999999999999999
Q ss_pred HHHHHhhhh---------------------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCC--C-cc-cccCCC
Q 048785 117 LEALTQSAG---------------------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTP--D-GA-ALKSPS 169 (280)
Q Consensus 117 ~~~l~~~~~---------------------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~--~-~~-~~~~~~ 169 (280)
|+++...++ +|+.+|++ |+++++ +++.+.++++|+++++++++. . .. ....+
T Consensus 172 ~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~- 250 (365)
T cd05279 172 YGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMT- 250 (365)
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHh-
Confidence 998765433 88899994 677774 578888899999999987665 3 12 22333
Q ss_pred CCcccEEEECCCC-CCccccccccc-CCcEEEEeCCCc-hhhHHHHHhhhhccceeeEEEEE--cCCHHHHHHHHHHHHC
Q 048785 170 GRKYDAVIHCARG-IPWSTFEPNLA-ENGKVIDLTPTP-SAMLTFAWQKLTFSKKQLVPLLV--IPKGENLVFLVKLLKE 244 (280)
Q Consensus 170 ~~~~d~v~d~~g~-~~~~~~~~~l~-~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~ 244 (280)
++++|++|||+|. ..+..++++++ ++|+++.+|... .....+....+ .++..+.+... ....+.+..+++++++
T Consensus 251 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~ 329 (365)
T cd05279 251 DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQ 329 (365)
T ss_pred CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHc
Confidence 4689999999986 55788999999 999999887543 22333334344 45556665433 2356789999999999
Q ss_pred CCeeE--eccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 245 GKIKT--LIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 245 g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
+.+.+ .+.++|+++++++||+.+.+++.. |+++
T Consensus 330 ~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 330 KKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred CCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 99874 577899999999999998877654 6655
No 83
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.2e-32 Score=233.11 Aligned_cols=273 Identities=22% Similarity=0.284 Sum_probs=217.9
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEe-------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI------- 74 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------- 74 (280)
++.|.|.+.++||+||+.++++|++|+....|..+. ..+|.++|+|++|.|+++|++++.+++||+|++.
T Consensus 16 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~ 92 (345)
T cd08260 16 REVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGT 92 (345)
T ss_pred EEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCC
Confidence 467888899999999999999999999988887542 3557899999999999999999999999999861
Q ss_pred -----------------ecCCCCCcceeEEeeccc--ccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 75 -----------------LNHFSGGGLAEFAMVKES--LTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 75 -----------------~~~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
.+....|+|++|+.++.+ .++++|+++++++++.++..+++||+++....+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~ 172 (345)
T cd08260 93 CPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVH 172 (345)
T ss_pred CccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEE
Confidence 011136899999999975 899999999999999999999999999854432
Q ss_pred -----------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCC-CC-cc-cccCCCCCcccEEEECCCC-CCccccc
Q 048785 126 -----------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKT-PD-GA-ALKSPSGRKYDAVIHCARG-IPWSTFE 189 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~-~~-~~-~~~~~~~~~~d~v~d~~g~-~~~~~~~ 189 (280)
+|+.+|++|+++++ +++.+.++++|++.+++++. .+ .. ......+ ++|++|||+|+ ..+..++
T Consensus 173 g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~ 251 (345)
T cd08260 173 GCGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG-GAHVSVDALGIPETCRNSV 251 (345)
T ss_pred CCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHH
Confidence 88899999999885 47888888999999998876 33 22 2233344 79999999995 5578899
Q ss_pred ccccCCcEEEEeCCCchhh--HHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEe--ccceecchhHHHHHH
Q 048785 190 PNLAENGKVIDLTPTPSAM--LTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTL--IDSKHLLSKAEDAWA 265 (280)
Q Consensus 190 ~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~--~~~~~~~~~~~~a~~ 265 (280)
++++++|+++.+|...... ..+.+..+..++..+.+... ...+.++.++++++++++.+. +.+.++++++++|++
T Consensus 252 ~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~ 330 (345)
T cd08260 252 ASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG-MPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALA 330 (345)
T ss_pred HHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc-CCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHH
Confidence 9999999999998543221 22233334455666665442 356788999999999998753 568899999999999
Q ss_pred HHhcCCCcCcEEEe
Q 048785 266 KGADGHATGKIILE 279 (280)
Q Consensus 266 ~~~~~~~~gkvvi~ 279 (280)
.+.++...+|+|++
T Consensus 331 ~~~~~~~~~~~v~~ 344 (345)
T cd08260 331 AMDDYATAGITVIT 344 (345)
T ss_pred HHHcCCCCceEEec
Confidence 99999989999875
No 84
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.2e-31 Score=228.91 Aligned_cols=277 Identities=32% Similarity=0.485 Sum_probs=214.5
Q ss_pred CCCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCC------------CCCCCCCccccccceEEEEEeCCCCCCCCC
Q 048785 1 HVHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARP------------ILPRKFPYIPATDVAGEIIEVGSEVKNFKA 67 (280)
Q Consensus 1 ~~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~------------~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 67 (280)
++|++.|.| +++||+|++.++++|++|+....|...+ +....+|.++|||++|+|+++|++++.+++
T Consensus 18 ~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~ 97 (350)
T cd08248 18 LENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEI 97 (350)
T ss_pred ecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCC
Confidence 467888888 4999999999999999999988774210 002356789999999999999999999999
Q ss_pred CCEEEEeecCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh--------h--------------
Q 048785 68 GYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA--------G-------------- 125 (280)
Q Consensus 68 Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~--------~-------------- 125 (280)
||+|++.......|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.+.. +
T Consensus 98 Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~ 177 (350)
T cd08248 98 GDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGT 177 (350)
T ss_pred CCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHH
Confidence 999998754345799999999999999999999999999999999999999974421 2
Q ss_pred ----hhhhCCCEEEEEecCCcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEE
Q 048785 126 ----LAKLGNSHVTATCGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVID 200 (280)
Q Consensus 126 ----la~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~ 200 (280)
+|+.+|++|++++++++.+.++++|.+.+++..... ...+ ...+++|++|||+|+.....++++++++|+++.
T Consensus 178 ~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l--~~~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~ 255 (350)
T cd08248 178 FAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEEL--TERGKFDVILDTVGGDTEKWALKLLKKGGTYVT 255 (350)
T ss_pred HHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHH--HhcCCCCEEEECCChHHHHHHHHHhccCCEEEE
Confidence 888999999988876777888899998888876543 2222 223579999999999888899999999999999
Q ss_pred eCCCch---h-------hH--HHHHhhhhcc----ceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHH
Q 048785 201 LTPTPS---A-------ML--TFAWQKLTFS----KKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAW 264 (280)
Q Consensus 201 ~g~~~~---~-------~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~ 264 (280)
++.... . .. .......... ...+.........+.+..+++++++|.+.+.+++.|+++++++++
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~ 335 (350)
T cd08248 256 LVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAY 335 (350)
T ss_pred ecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHH
Confidence 873321 0 00 0111111111 111111112345678999999999999988888999999999999
Q ss_pred HHHhcCCCcCcEEEe
Q 048785 265 AKGADGHATGKIILE 279 (280)
Q Consensus 265 ~~~~~~~~~gkvvi~ 279 (280)
+.+.++...+|++++
T Consensus 336 ~~~~~~~~~~~vv~~ 350 (350)
T cd08248 336 EKVESGHARGKTVIK 350 (350)
T ss_pred HHHhcCCCceEEEeC
Confidence 999988878888864
No 85
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.3e-32 Score=231.62 Aligned_cols=275 Identities=20% Similarity=0.219 Sum_probs=211.4
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCC--------CCCCCCCccccccceEEEEEeCCCCCC-CCCCCEE
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARP--------ILPRKFPYIPATDVAGEIIEVGSEVKN-FKAGYNV 71 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V~~vG~~v~~-~~~Gd~V 71 (280)
++++|.|+++++||+|++.++++|+.|+....|.... .....+|.++|+|++|+|+++|++++. +++||+|
T Consensus 13 ~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V 92 (341)
T cd08262 13 VRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRV 92 (341)
T ss_pred EEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEE
Confidence 3678999999999999999999999999988773210 012245788999999999999999997 9999999
Q ss_pred EEeec--------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 72 VAILN--------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 72 ~~~~~--------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
++... ....|+|++|+.+|.+.++++|+++++++++ ++.++++||+++ ..++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~ 170 (341)
T cd08262 93 TSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGC 170 (341)
T ss_pred EecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECC
Confidence 98621 1136899999999999999999999998876 667778999885 3332
Q ss_pred ---------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCCc-----ccccCCCCCcccEEEECCCCC-Ccccc
Q 048785 126 ---------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPDG-----AALKSPSGRKYDAVIHCARGI-PWSTF 188 (280)
Q Consensus 126 ---------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~-----~~~~~~~~~~~d~v~d~~g~~-~~~~~ 188 (280)
+|+.+|++ ++++++ +++.+.++++|++++++++.... ..+..+.++++|++|||+|+. .+..+
T Consensus 171 g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 250 (341)
T cd08262 171 GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQI 250 (341)
T ss_pred CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHH
Confidence 88899996 555554 47888889999998998765431 122344567899999999984 57888
Q ss_pred cccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHH
Q 048785 189 EPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAK 266 (280)
Q Consensus 189 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~ 266 (280)
+++++++|+++.+|....... .......+++.++.+.. ....+.+.++++++++|.+.+ .+.+.+++++++++++.
T Consensus 251 ~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~ 328 (341)
T cd08262 251 IEGAPPGGRIVVVGVCMESDN-IEPALAIRKELTLQFSL-GYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEA 328 (341)
T ss_pred HHHhccCCEEEEECCCCCCCc-cCHHHHhhcceEEEEEe-cccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHH
Confidence 999999999999985432110 01111134555655443 335668899999999999875 45689999999999999
Q ss_pred HhcCCCcCcEEEe
Q 048785 267 GADGHATGKIILE 279 (280)
Q Consensus 267 ~~~~~~~gkvvi~ 279 (280)
+.+++..+|+|++
T Consensus 329 ~~~~~~~~kvvv~ 341 (341)
T cd08262 329 LRDPEHHCKILVD 341 (341)
T ss_pred HhcCCCceEEEeC
Confidence 9999989999874
No 86
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=5.5e-32 Score=228.60 Aligned_cols=274 Identities=21% Similarity=0.261 Sum_probs=209.7
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee---cC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL---NH 77 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~ 77 (280)
++++|.|.++++||+||+.++++|++|+....|..+. +..+|.++|||++|+|++ +++..+++||+|++.. +.
T Consensus 16 ~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~ 91 (323)
T TIGR02823 16 VETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGV 91 (323)
T ss_pred EeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCCCC
Confidence 4688999999999999999999999999988887531 124578899999999998 5667899999998762 11
Q ss_pred CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhh--------h-h----------------hhhhCCC
Q 048785 78 FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQS--------A-G----------------LAKLGNS 132 (280)
Q Consensus 78 ~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~--------~-~----------------la~~~G~ 132 (280)
...|++++|+.+|.+.++++|+++++++++++++.+.+|+.++... . . +|+.+|+
T Consensus 92 ~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~ 171 (323)
T TIGR02823 92 SHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY 171 (323)
T ss_pred CCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 2368999999999999999999999999999999988998776321 1 1 8899999
Q ss_pred EEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHH
Q 048785 133 HVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTF 211 (280)
Q Consensus 133 ~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~ 211 (280)
+++++++ +++.+.++++|++.+++.++....... ..+.++|+++||+|+..+..++++++++|+++.+|.......+.
T Consensus 172 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 250 (323)
T TIGR02823 172 EVVASTGKAEEEDYLKELGASEVIDREDLSPPGKP-LEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGPDLPT 250 (323)
T ss_pred eEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHH-hcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCCCccc
Confidence 9888875 567788899999888886553321112 22235999999999888889999999999999998543322222
Q ss_pred HHhhhhccceeeEEEEEc-C----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 212 AWQKLTFSKKQLVPLLVI-P----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
....+..++.++.+.... . ..+.+..+.+++..+.+++. .+.|+++++++||+.+.+++..+|+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 251 TVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 222233455555554321 1 12345666777888887664 45899999999999999999999999864
No 87
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=4.5e-32 Score=231.00 Aligned_cols=271 Identities=28% Similarity=0.358 Sum_probs=215.8
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
++.+.|++.+++|+||+.++++|+.|+.+..|..+ +...|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~ 91 (343)
T cd08235 15 EEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGE 91 (343)
T ss_pred EEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCC
Confidence 46788889999999999999999999998877653 1245678999999999999999999999999998521
Q ss_pred -------------------CCCCCcceeEEeecccc-----cccCCCCCChhhhcccchhHHHHHHHHHhhhh-------
Q 048785 77 -------------------HFSGGGLAEFAMVKESL-----TASRPLEVSAAEGAGLPLAGLTALEALTQSAG------- 125 (280)
Q Consensus 77 -------------------~~~~g~~~~~~~v~~~~-----~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------- 125 (280)
....|+|++|+.++.+. ++++|+++++.+++++ ..+.+||+++... +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~-~~~~g~~V 169 (343)
T cd08235 92 CHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRKA-GIKPGDTV 169 (343)
T ss_pred ChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHhc-CCCCCCEE
Confidence 12469999999999998 9999999999999876 6778999998442 2
Q ss_pred --------------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCCc--ccccCCCCCcccEEEECCCCC-Ccc
Q 048785 126 --------------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVIHCARGI-PWS 186 (280)
Q Consensus 126 --------------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~-~~~ 186 (280)
+|+..|++ |+++++ +++.+.+.++|.++++++++... .....+.++++|++|||+++. .+.
T Consensus 170 lV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~ 249 (343)
T cd08235 170 LVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQA 249 (343)
T ss_pred EEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHH
Confidence 88899998 888775 47778888899999998876652 233345567799999999975 578
Q ss_pred cccccccCCcEEEEeCCCchh-hHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee--EeccceecchhHHHH
Q 048785 187 TFEPNLAENGKVIDLTPTPSA-MLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK--TLIDSKHLLSKAEDA 263 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~--~~~~~~~~~~~~~~a 263 (280)
.++++++++|+++.++..... ...+......+++.++.+.. ....+.++.++++++++.++ +.+...|+++++++|
T Consensus 250 ~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a 328 (343)
T cd08235 250 QALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSY-AASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEA 328 (343)
T ss_pred HHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEe-cCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHH
Confidence 889999999999998754321 12223344556777766544 34567788999999999986 345678999999999
Q ss_pred HHHHhcCCCcCcEEEe
Q 048785 264 WAKGADGHATGKIILE 279 (280)
Q Consensus 264 ~~~~~~~~~~gkvvi~ 279 (280)
++.+.+++ .+|+|++
T Consensus 329 ~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 329 FELAADGK-SLKIVIT 343 (343)
T ss_pred HHHHhCCC-cEEEEeC
Confidence 99999998 8899874
No 88
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=4.1e-32 Score=231.29 Aligned_cols=271 Identities=21% Similarity=0.258 Sum_probs=213.0
Q ss_pred CCCCCCCCC-CCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 2 VHVPVPTPR-KDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 2 ~~~~~~~~~-~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
+++|+|.|. ++||+|++.++++|+.|+....|..+ ..+|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 90 (344)
T cd08284 15 EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACG 90 (344)
T ss_pred EeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCC
Confidence 577888875 99999999999999999998877654 245689999999999999999999999999987421
Q ss_pred ------------------------CCCCCcceeEEeeccc--ccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----
Q 048785 77 ------------------------HFSGGGLAEFAMVKES--LTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----- 125 (280)
Q Consensus 77 ------------------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----- 125 (280)
....|++++|+.++.+ .++++|++++++++++++.+++|||+++.. .+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~ 169 (344)
T cd08284 91 ECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGD 169 (344)
T ss_pred CChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCC
Confidence 0125899999999965 999999999999999999999999999854 32
Q ss_pred ----------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCC-C
Q 048785 126 ----------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGI-P 184 (280)
Q Consensus 126 ----------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~ 184 (280)
+|+.+|+ +|++++++ ++.+.++++|+. .++.+... ......+.++++|++|||+++. .
T Consensus 170 ~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~ 248 (344)
T cd08284 170 TVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATEGRGADVVLEAVGGAAA 248 (344)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHH
Confidence 8889997 89988754 678888889975 45555443 2233345667899999999974 5
Q ss_pred cccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHH
Q 048785 185 WSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAED 262 (280)
Q Consensus 185 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~ 262 (280)
+..++++++++|+++.+|................++..+.... ....+.++++++++.++++++ ++.++++++++++
T Consensus 249 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 327 (344)
T cd08284 249 LDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR-CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPE 327 (344)
T ss_pred HHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEec-CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHH
Confidence 8889999999999999985542222222223334555554332 346788999999999999875 4667899999999
Q ss_pred HHHHHhcCCCcCcEEEeC
Q 048785 263 AWAKGADGHATGKIILEP 280 (280)
Q Consensus 263 a~~~~~~~~~~gkvvi~~ 280 (280)
+++.+.+++. +|+|+.+
T Consensus 328 a~~~~~~~~~-~k~Vi~~ 344 (344)
T cd08284 328 AYRLFDKRKV-LKVVLDP 344 (344)
T ss_pred HHHHHhcCCc-eEEEecC
Confidence 9999988877 8999863
No 89
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.2e-32 Score=227.60 Aligned_cols=270 Identities=20% Similarity=0.237 Sum_probs=210.3
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhH-hccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIK-KGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFS 79 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 79 (280)
+++++.|+++++||+|++.++++|+.|+..+ .|..... ...+|.++|+|++|+|+++|++++.+++||+|+++ .
T Consensus 9 ~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----~ 83 (312)
T cd08269 9 VEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL----S 83 (312)
T ss_pred EEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe----c
Confidence 3577888999999999999999999999887 6654211 11347789999999999999999999999999987 4
Q ss_pred CCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh---------------------hhhhCCCE-EEEE
Q 048785 80 GGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------------------LAKLGNSH-VTAT 137 (280)
Q Consensus 80 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------------------la~~~G~~-Vi~~ 137 (280)
.|+|++|+.++.+.++++|+++ ..++....++++|++++. ..+ +|+.+|++ |+++
T Consensus 84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~ 160 (312)
T cd08269 84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAI 160 (312)
T ss_pred CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence 6899999999999999999988 222222366778888875 332 88999997 9888
Q ss_pred ecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCC-CcccccccccCCcEEEEeCCCchhhHHHHH
Q 048785 138 CGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGI-PWSTFEPNLAENGKVIDLTPTPSAMLTFAW 213 (280)
Q Consensus 138 ~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~ 213 (280)
+++ ++.++++++|++++++++... ......+.++++|++|||+|+. .+..++++++++|+++.+|........+..
T Consensus 161 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~ 240 (312)
T cd08269 161 DRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPF 240 (312)
T ss_pred CCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCH
Confidence 865 678888899999888866544 2333455667899999999864 478899999999999999854322233333
Q ss_pred hhhhccceeeEEEEEc---CCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHHhcCCC-cCcEEE
Q 048785 214 QKLTFSKKQLVPLLVI---PKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKGADGHA-TGKIIL 278 (280)
Q Consensus 214 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvi 278 (280)
..+.+++.++.++... ...+.+++++++++++.+++ ++.+.|+++++++|++.+.+++. ..|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 241 QTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 4556677776655422 13478999999999999986 45678999999999999998864 578876
No 90
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=4.7e-32 Score=233.84 Aligned_cols=276 Identities=23% Similarity=0.282 Sum_probs=210.0
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCC----CCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPI----LPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~----~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 75 (280)
++++|.|.++++||+|++.++++|++|+....+..... ....+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 41 ~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 120 (384)
T cd08265 41 VEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEM 120 (384)
T ss_pred EEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCC
Confidence 35789999999999999999999999998776421100 0124678999999999999999999999999998610
Q ss_pred -----------------------cCCCCCcceeEEeecccccccCCCCC------ChhhhcccchhHHHHHHHHHhh-hh
Q 048785 76 -----------------------NHFSGGGLAEFAMVKESLTASRPLEV------SAAEGAGLPLAGLTALEALTQS-AG 125 (280)
Q Consensus 76 -----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~------~~~~aa~~~~~~~~a~~~l~~~-~~ 125 (280)
+....|+|++|+.++.+.++++|+.+ .+.++++++.++++||+++... .+
T Consensus 121 ~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~ 200 (384)
T cd08265 121 MWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGG 200 (384)
T ss_pred CCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHHHhhcCC
Confidence 01136899999999999999999863 2334666777888999998544 22
Q ss_pred ---------------------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCC---C--cccccCCCCCcccEEE
Q 048785 126 ---------------------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTP---D--GAALKSPSGRKYDAVI 177 (280)
Q Consensus 126 ---------------------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~---~--~~~~~~~~~~~~d~v~ 177 (280)
+|+.+|+ +|++++++ ++.+.++++|+++++++++. . ...+..+.++++|+++
T Consensus 201 ~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvl 280 (384)
T cd08265 201 FRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQV 280 (384)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEE
Confidence 8889999 79998864 68888899999999987643 2 2234456677899999
Q ss_pred ECCCCC--CcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccc
Q 048785 178 HCARGI--PWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDS 253 (280)
Q Consensus 178 d~~g~~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~ 253 (280)
||+|+. .+..++++++++|+++.+|..... ..+....+.++..++.+.........+.+++++++++.+++ ++.+
T Consensus 281 d~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~ 359 (384)
T cd08265 281 EAAGAPPATIPQMEKSIAINGKIVYIGRAATT-VPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITA 359 (384)
T ss_pred ECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC-CcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEE
Confidence 999974 477889999999999999854321 22222344455666666543334567899999999999975 3668
Q ss_pred eecchhHHHHHHHHhcCCCcCcEEE
Q 048785 254 KHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 254 ~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
.|+++++++|++.+.++ ..+|+++
T Consensus 360 ~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 360 RFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred EeeHHHHHHHHHHHhcC-CCceEEe
Confidence 89999999999997665 5678876
No 91
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=7.9e-32 Score=228.20 Aligned_cols=270 Identities=32% Similarity=0.402 Sum_probs=212.0
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
+++++.|.+.++|++||+.++++|+.|+....|..+. ...+|.++|+|++|+|+++|++++.+++||+|++. ..
T Consensus 20 ~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~----~~ 93 (329)
T cd08250 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDP--GVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATM----SF 93 (329)
T ss_pred EEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCC--CCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEe----cC
Confidence 3567888899999999999999999999988876532 13577899999999999999999999999999987 47
Q ss_pred CcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEe
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATC 138 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~ 138 (280)
|+|++|+.++.+.++++|++ +.++++++.++.+||+++.+..+ +++.+|++|++++
T Consensus 94 g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~ 171 (329)
T cd08250 94 GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTC 171 (329)
T ss_pred cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEe
Confidence 89999999999999999987 45677888999999999865432 7888999999988
Q ss_pred cC-CcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchh---------
Q 048785 139 GA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSA--------- 207 (280)
Q Consensus 139 ~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~--------- 207 (280)
++ ++.+.++++|++.+++.+... ...+....++++|++|||+|+..+..++++++++|+++.+|.....
T Consensus 172 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 251 (329)
T cd08250 172 SSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPV 251 (329)
T ss_pred CcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCccccc
Confidence 64 778888899998888776544 2222223346799999999987788999999999999998754321
Q ss_pred -hHHHHHhhhhccceeeEEEEEcC----CHHHHHHHHHHHHCCCeeEe--ccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 208 -MLTFAWQKLTFSKKQLVPLLVIP----KGENLVFLVKLLKEGKIKTL--IDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
...+. .....++..+.+..... ..+.+.+++++++++.+.+. ..+.++++++++|++.+.++...+|++++
T Consensus 252 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 252 KGATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred cccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 00111 12233455555544311 24567889999999999874 34569999999999999988888899874
No 92
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9.6e-32 Score=226.63 Aligned_cols=271 Identities=24% Similarity=0.247 Sum_probs=210.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec---CC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---HF 78 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---~~ 78 (280)
.+.+.|.++++||+||+.++++|+.|+....|..+. ...|.++|||++|+|+++|+ ..+++||+|+++.. ..
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~ 92 (320)
T cd08243 18 REIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS---VKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRT 92 (320)
T ss_pred eecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCCCCC
Confidence 355667789999999999999999999988776532 24578899999999999995 57999999998632 12
Q ss_pred CCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEE
Q 048785 79 SGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTA 136 (280)
Q Consensus 79 ~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~ 136 (280)
..|+|++|+.++.+.++++|++++++++++++.++.|||+++....+ +|+.+|++|++
T Consensus 93 ~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~ 172 (320)
T cd08243 93 FDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTA 172 (320)
T ss_pred CCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEE
Confidence 35899999999999999999999999999999999999999866432 88999999999
Q ss_pred Eec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhh--HHHHH
Q 048785 137 TCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAM--LTFAW 213 (280)
Q Consensus 137 ~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~ 213 (280)
+++ +++.+.+.++|++++++........+... ++++|++|||+|+..+..++++++++|+++.+|...... .....
T Consensus 173 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~ 251 (320)
T cd08243 173 TTRSPERAALLKELGADEVVIDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNP 251 (320)
T ss_pred EeCCHHHHHHHHhcCCcEEEecCccHHHHHHHh-CCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcccCCcch
Confidence 885 47788888999988875422112222223 678999999999988889999999999999988532110 00001
Q ss_pred hhh--hccceeeEEEEE-cCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 214 QKL--TFSKKQLVPLLV-IPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 214 ~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
... ..++..+.+... ....+.++.++++++++.+++...+.|+++++++|++.+.++...+|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 252 MDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 111 134444444332 11245688899999999998877789999999999999998888889886
No 93
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=6.7e-32 Score=231.55 Aligned_cols=273 Identities=22% Similarity=0.233 Sum_probs=205.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEe-------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI------- 74 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~------- 74 (280)
++++.|+++++||+||+.++++|++|+....|.........+|.++|||++|+|+++|++++.+++||+|++.
T Consensus 32 ~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 111 (364)
T PLN02702 32 QPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWR 111 (364)
T ss_pred EeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCC
Confidence 4677788899999999999999999999887643211112357789999999999999999999999999862
Q ss_pred ------------------ecCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 75 ------------------LNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 75 ------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
......|+|++|+.++.+.++++|++++++++++. ..+.++|+++ ...+
T Consensus 112 c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g 189 (364)
T PLN02702 112 CNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMG 189 (364)
T ss_pred CcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC
Confidence 11123689999999999999999999999988763 2233577776 3322
Q ss_pred ----------hhhhCCCE-EEEEecC-CcHHHHHhcCCCeeecCCC--CC-cccc---cCCCCCcccEEEECCCC-CCcc
Q 048785 126 ----------LAKLGNSH-VTATCGA-RNIEFVKSLGADEVLDYKT--PD-GAAL---KSPSGRKYDAVIHCARG-IPWS 186 (280)
Q Consensus 126 ----------la~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~--~~-~~~~---~~~~~~~~d~v~d~~g~-~~~~ 186 (280)
+|+.+|++ |++++++ ++.+.++++|++.+++++. .. ...+ ....++++|++|||+|+ ..+.
T Consensus 190 ~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 269 (364)
T PLN02702 190 AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMS 269 (364)
T ss_pred CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHH
Confidence 88899984 6666644 6788889999998876542 22 1211 11335579999999995 5588
Q ss_pred cccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee--Eeccceecc--hhHHH
Q 048785 187 TFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK--TLIDSKHLL--SKAED 262 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~--~~~~~~~~~--~~~~~ 262 (280)
.++++++++|+++.+|..... ..+......+++.++.+... ....+..++++++++++. +.+.++|++ +++++
T Consensus 270 ~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 346 (364)
T PLN02702 270 TALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFR--YRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEE 346 (364)
T ss_pred HHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEecc--ChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHH
Confidence 999999999999998853321 22233345567777777553 456788999999999885 456677665 79999
Q ss_pred HHHHHhcCCCcCcEEEe
Q 048785 263 AWAKGADGHATGKIILE 279 (280)
Q Consensus 263 a~~~~~~~~~~gkvvi~ 279 (280)
|++.+.+++..+|+++.
T Consensus 347 a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 347 AFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHHHhcCCCceEEEEe
Confidence 99999988888899985
No 94
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=9.9e-32 Score=228.63 Aligned_cols=276 Identities=26% Similarity=0.282 Sum_probs=209.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
.+.|.|.++++|++||+.++++|+.|+.++.+.........+|.++|+|++|+|+.+|++++.+++||+|+++..
T Consensus 16 ~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~ 95 (341)
T cd05281 16 VEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGK 95 (341)
T ss_pred EeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCC
Confidence 467888899999999999999999999876543211011235678999999999999999999999999988510
Q ss_pred -------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 77 -------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 77 -------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
....|+|++|++++.+.++++|++++++. ++++..+.++++++.....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~~~~~~~~g~~vlV~g~g~ 174 (341)
T cd05281 96 CYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHTVLAGDVSGKSVLITGCGP 174 (341)
T ss_pred ChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHHHHhcCCCCCEEEEECCCH
Confidence 11368999999999999999999998854 4566666788877642111
Q ss_pred -------hhhhCCC-EEEEEecC-CcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCC-CcccccccccC
Q 048785 126 -------LAKLGNS-HVTATCGA-RNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGI-PWSTFEPNLAE 194 (280)
Q Consensus 126 -------la~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~ 194 (280)
+|+.+|+ +|++++++ ++.+.++++|++++++++..+ ........++++|++|||+|+. .+..+++++++
T Consensus 175 vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~ 254 (341)
T cd05281 175 IGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTP 254 (341)
T ss_pred HHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhcc
Confidence 8889999 78888644 678888899999888876544 3223345567899999999875 47788999999
Q ss_pred CcEEEEeCCCchhhHHHH-HhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee--EeccceecchhHHHHHHHHhcCC
Q 048785 195 NGKVIDLTPTPSAMLTFA-WQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK--TLIDSKHLLSKAEDAWAKGADGH 271 (280)
Q Consensus 195 ~g~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~ 271 (280)
+|+++.+|..... .... .....+++..+.+.......+.+..++++++++.+. +.+.+.++++++++||+.+.+++
T Consensus 255 ~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 333 (341)
T cd05281 255 GGRVSILGLPPGP-VDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK 333 (341)
T ss_pred CCEEEEEccCCCC-cccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC
Confidence 9999998754321 1111 223555666666654333456678899999999975 45667899999999999999988
Q ss_pred CcCcEEEeC
Q 048785 272 ATGKIILEP 280 (280)
Q Consensus 272 ~~gkvvi~~ 280 (280)
.||+++++
T Consensus 334 -~gk~vv~~ 341 (341)
T cd05281 334 -CGKVVLYP 341 (341)
T ss_pred -CceEEecC
Confidence 89999875
No 95
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.9e-31 Score=226.77 Aligned_cols=276 Identities=30% Similarity=0.412 Sum_probs=218.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
++.+.|.+.+++|+|++.++++|++|+....|..+. ...+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~ 95 (342)
T cd08266 18 GDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGR 95 (342)
T ss_pred eecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEcccccccc
Confidence 356677789999999999999999999988776531 124578999999999999999999999999998751
Q ss_pred ------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 76 ------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 76 ------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
+....|++++|+.++.+.++++|+++++++++++++++.+||+++....+
T Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~ 175 (342)
T cd08266 96 CEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGA 175 (342)
T ss_pred chhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECC
Confidence 11236889999999999999999999999999999999999999755432
Q ss_pred ----------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccc
Q 048785 126 ----------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNL 192 (280)
Q Consensus 126 ----------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l 192 (280)
+++..|++|+.++++ ++.+.+..++.+.+++..+.. ......+.++++|++++++|+..+..+++++
T Consensus 176 ~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l 255 (342)
T cd08266 176 GSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATWEKSLKSL 255 (342)
T ss_pred CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHh
Confidence 778889999988864 677778888887777665433 2223334456799999999988888899999
Q ss_pred cCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCC
Q 048785 193 AENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHA 272 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~ 272 (280)
+++|+++.++................++..+.+.. ......+..++++++++.+++.+.+.|+++++++|++.+.++..
T Consensus 256 ~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~ 334 (342)
T cd08266 256 ARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGST-MGTKAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQ 334 (342)
T ss_pred hcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEe-cCCHHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCC
Confidence 99999999874433222222223344556665544 34567888999999999998888889999999999999998888
Q ss_pred cCcEEEeC
Q 048785 273 TGKIILEP 280 (280)
Q Consensus 273 ~gkvvi~~ 280 (280)
.+|+++++
T Consensus 335 ~~kvv~~~ 342 (342)
T cd08266 335 FGKIVLTP 342 (342)
T ss_pred CceEEEeC
Confidence 89999874
No 96
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=8.9e-32 Score=229.14 Aligned_cols=271 Identities=25% Similarity=0.287 Sum_probs=211.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
++.|.|+++++||+||+.++++|+.|+....|..+ ...|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 15 ~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~----~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~ 90 (343)
T cd08236 15 EDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA----YHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGK 90 (343)
T ss_pred EecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC----CCCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCC
Confidence 56788899999999999999999999998877652 24567899999999999999999999999998851
Q ss_pred ------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 76 ------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 76 ------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
+....|+|++|+.+|.+.++++|+++++++++++ ..+++||+++. ..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~ 168 (343)
T cd08236 91 CEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGA 168 (343)
T ss_pred ChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECC
Confidence 1124689999999999999999999999999887 46679999985 332
Q ss_pred ---------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCCcc-cccCCCCCcccEEEECCCCC-Ccccccccc
Q 048785 126 ---------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVIHCARGI-PWSTFEPNL 192 (280)
Q Consensus 126 ---------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l 192 (280)
+|+.+|++ |+++++ +++.++++++|++.+++++..... ......++++|++|||+|+. .+..++++|
T Consensus 169 g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l 248 (343)
T cd08236 169 GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALALA 248 (343)
T ss_pred CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHh
Confidence 88999996 888885 477788888999999887654422 23345566799999999864 578899999
Q ss_pred cCCcEEEEeCCCchhh--HHHHHhhhhccceeeEEEEEcC----CHHHHHHHHHHHHCCCee--EeccceecchhHHHHH
Q 048785 193 AENGKVIDLTPTPSAM--LTFAWQKLTFSKKQLVPLLVIP----KGENLVFLVKLLKEGKIK--TLIDSKHLLSKAEDAW 264 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~g~~~--~~~~~~~~~~~~~~a~ 264 (280)
+++|+++.+|...... ....+..+..++..+.+..... ..+.+++++++++++++. +.+...++++++++++
T Consensus 249 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 328 (343)
T cd08236 249 RPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAF 328 (343)
T ss_pred hcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHH
Confidence 9999999998443210 1111222334555555544321 256788899999999975 4566889999999999
Q ss_pred HHHhc-CCCcCcEEE
Q 048785 265 AKGAD-GHATGKIIL 278 (280)
Q Consensus 265 ~~~~~-~~~~gkvvi 278 (280)
+.+.+ +...+|+|+
T Consensus 329 ~~~~~~~~~~~k~v~ 343 (343)
T cd08236 329 ERLADREEFSGKVLL 343 (343)
T ss_pred HHHHcCCCCeeEEeC
Confidence 99998 667788874
No 97
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1e-30 Score=223.41 Aligned_cols=276 Identities=26% Similarity=0.397 Sum_probs=208.2
Q ss_pred CCCCCCC---CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCC-CCCCCCEEEEeecCC
Q 048785 3 HVPVPTP---RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVK-NFKAGYNVVAILNHF 78 (280)
Q Consensus 3 ~~~~~~~---~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~ 78 (280)
+++.|.| ++++|+||+.++++|++|+....+.... ....|.++|+|++|+|+++|++++ .+++||+|++.....
T Consensus 17 ~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~ 94 (352)
T cd08247 17 TIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH--FKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHP 94 (352)
T ss_pred ccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc--cccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCC
Confidence 3444444 8999999999999999999876543221 112367899999999999999998 899999998863211
Q ss_pred --CCCcceeEEeeccc----ccccCCCCCChhhhcccchhHHHHHHHHHhhh-h----------------------hhhh
Q 048785 79 --SGGGLAEFAMVKES----LTASRPLEVSAAEGAGLPLAGLTALEALTQSA-G----------------------LAKL 129 (280)
Q Consensus 79 --~~g~~~~~~~v~~~----~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~-~----------------------la~~ 129 (280)
..|+|++|+.++.+ .++++|+++++++++.++.++.|||+++.... + +|+.
T Consensus 95 ~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~ 174 (352)
T cd08247 95 YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKN 174 (352)
T ss_pred CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHh
Confidence 26899999999987 78999999999999999999999999986654 2 7777
Q ss_pred C-CC-EEEEEecCCcHHHHHhcCCCeeecCCCCC-----cccccCCC-CCcccEEEECCCC-CCccccccccc---CCcE
Q 048785 130 G-NS-HVTATCGARNIEFVKSLGADEVLDYKTPD-----GAALKSPS-GRKYDAVIHCARG-IPWSTFEPNLA---ENGK 197 (280)
Q Consensus 130 ~-G~-~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-----~~~~~~~~-~~~~d~v~d~~g~-~~~~~~~~~l~---~~g~ 197 (280)
+ |. +++++.++++.+.++++|+++++++++.. ...+.... ++++|++|||+|+ .....++++++ ++|+
T Consensus 175 ~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~ 254 (352)
T cd08247 175 HYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGH 254 (352)
T ss_pred cCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCE
Confidence 6 45 67777766666677889999998876543 12233333 6789999999998 46778889999 9999
Q ss_pred EEEeCCCch-----hh----------HHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHH
Q 048785 198 VIDLTPTPS-----AM----------LTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAED 262 (280)
Q Consensus 198 ~v~~g~~~~-----~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~ 262 (280)
++.++.... .. .........+....+......+..+.+..+++++.++.+++.+.+.++++++++
T Consensus 255 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 334 (352)
T cd08247 255 YVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKE 334 (352)
T ss_pred EEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHH
Confidence 997642211 00 011122333444444433322334678889999999999988888999999999
Q ss_pred HHHHHhcCCCcCcEEEeC
Q 048785 263 AWAKGADGHATGKIILEP 280 (280)
Q Consensus 263 a~~~~~~~~~~gkvvi~~ 280 (280)
|++.+.+++..||+++.+
T Consensus 335 a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 335 AFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHcCCCCCcEEEeC
Confidence 999999998889999864
No 98
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2e-31 Score=224.80 Aligned_cols=256 Identities=21% Similarity=0.265 Sum_probs=200.2
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC---
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH--- 77 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--- 77 (280)
++++|.|+++++||+||+.++++|++|+....|..+ +|.++|||++|+|+++|++ +++||+|......
T Consensus 14 ~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~------~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~ 84 (319)
T cd08242 14 VEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP------FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACG 84 (319)
T ss_pred EEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC------CCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCC
Confidence 357899999999999999999999999998877652 5678999999999999998 6799999742110
Q ss_pred ----------------------CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 78 ----------------------FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 78 ----------------------~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
...|+|++|+.++.+.++++|+++++++++.+ ....++|.++ ...+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~ 162 (319)
T cd08242 85 RCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-EQVPITPGDKVAVL 162 (319)
T ss_pred CChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEE
Confidence 13689999999999999999999999888864 3334666655 3322
Q ss_pred -----------hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC-Ccccccccc
Q 048785 126 -----------LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI-PWSTFEPNL 192 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l 192 (280)
+|+.+|++|+++++ +++.++++++|++.+++++.. +.++++|++|||+|+. .+..+++++
T Consensus 163 g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~d~vid~~g~~~~~~~~~~~l 235 (319)
T cd08242 163 GDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE-------SEGGGFDVVVEATGSPSGLELALRLV 235 (319)
T ss_pred CCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc-------ccCCCCCEEEECCCChHHHHHHHHHh
Confidence 88999999998885 478899999999888776432 3556799999999874 578889999
Q ss_pred cCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCe--eEeccceecchhHHHHHHHHhcC
Q 048785 193 AENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKI--KTLIDSKHLLSKAEDAWAKGADG 270 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~--~~~~~~~~~~~~~~~a~~~~~~~ 270 (280)
+++|+++..+.... ...+....+.+++.++.+... ..+++++++++++++ .+.+.+.|+++++++||+.+.++
T Consensus 236 ~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~ 310 (319)
T cd08242 236 RPRGTVVLKSTYAG-PASFDLTKAVVNEITLVGSRC----GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEP 310 (319)
T ss_pred hcCCEEEEEcccCC-CCccCHHHheecceEEEEEec----ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcC
Confidence 99999998653222 122334445556666665432 127888999999999 56678999999999999999877
Q ss_pred CCcCcEEEeC
Q 048785 271 HATGKIILEP 280 (280)
Q Consensus 271 ~~~gkvvi~~ 280 (280)
. .+|+++++
T Consensus 311 ~-~~k~vi~~ 319 (319)
T cd08242 311 G-ALKVLLRP 319 (319)
T ss_pred C-ceEEEeCC
Confidence 5 57999874
No 99
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.4e-31 Score=221.36 Aligned_cols=277 Identities=32% Similarity=0.433 Sum_probs=219.4
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
+++.|.|++.+++|+||+.++++|++|+....|.... ...|.++|||++|+|+.+|++++.+++||+|++..+....
T Consensus 17 ~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~ 93 (325)
T cd08271 17 LEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARG 93 (325)
T ss_pred EeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCCCCC
Confidence 3577888999999999999999999999887765431 1236789999999999999999999999999987543346
Q ss_pred CcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEe
Q 048785 81 GGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATC 138 (280)
Q Consensus 81 g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~ 138 (280)
|+|++++.++.+.++++|+++++.+++.+++.+.+|++++.+..+ +++..|++|+.+.
T Consensus 94 ~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~ 173 (325)
T cd08271 94 GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC 173 (325)
T ss_pred ccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE
Confidence 899999999999999999999999999999999999999865432 7888999988877
Q ss_pred cCCcHHHHHhcCCCeeecCCCCC-c-ccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchh-hHHHHHhh
Q 048785 139 GARNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSA-MLTFAWQK 215 (280)
Q Consensus 139 ~~~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~ 215 (280)
++++.+.+.++|++.+++..... . .......++++|++++|+++.....++++++++|+++.++..... ........
T Consensus 174 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~ 253 (325)
T cd08271 174 SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDASPDPPFTRA 253 (325)
T ss_pred cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCCcchhHHhhc
Confidence 66777888889998888766544 2 233344567899999999988777889999999999988643221 11222234
Q ss_pred hhccceeeEEEEEc-------CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 216 LTFSKKQLVPLLVI-------PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 216 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
+.+++..+...... ..++.+.+++++++++.+++...+.|+++++.++++.+.++...+|+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 254 LSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 45555555443221 123456788899999999887778999999999999999888889999874
No 100
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.7e-31 Score=226.34 Aligned_cols=272 Identities=22% Similarity=0.246 Sum_probs=208.1
Q ss_pred CCCCCCCCC-CCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec---
Q 048785 1 HVHVPVPTP-RKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN--- 76 (280)
Q Consensus 1 ~~~~~~~~~-~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--- 76 (280)
+++.|.|.| +++||+||+.++++|++|+....|..+ ...|.++|||++|+|+++|++++.+++||+|++...
T Consensus 14 ~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 89 (345)
T cd08287 14 VEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISD 89 (345)
T ss_pred EEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCC
Confidence 357788886 899999999999999999998887754 245789999999999999999999999999987211
Q ss_pred ---------------------CCCCCcceeEEeeccc--ccccCCCCCChhhhc-----ccchhHHHHHHHHHhhhh---
Q 048785 77 ---------------------HFSGGGLAEFAMVKES--LTASRPLEVSAAEGA-----GLPLAGLTALEALTQSAG--- 125 (280)
Q Consensus 77 ---------------------~~~~g~~~~~~~v~~~--~~~~~p~~~~~~~aa-----~~~~~~~~a~~~l~~~~~--- 125 (280)
...+|+|++|+.+|.+ .++++|++++++.+. ++...+++||+++. .++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~-~~~~~~ 168 (345)
T cd08287 90 GTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAV-SAGVRP 168 (345)
T ss_pred CCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHH-hcCCCC
Confidence 1234899999999975 899999999872221 22256778888874 222
Q ss_pred ------------------hhhhCCCE-EEEEecC-CcHHHHHhcCCCeeecCCCCC-c-ccccCCCCCcccEEEECCCC-
Q 048785 126 ------------------LAKLGNSH-VTATCGA-RNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCARG- 182 (280)
Q Consensus 126 ------------------la~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~- 182 (280)
+|+.+|++ +++++++ ++.+.++++|++.+++++... . .....+.++++|+++||+|+
T Consensus 169 g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~ 248 (345)
T cd08287 169 GSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQ 248 (345)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCH
Confidence 88999994 7777765 578888999999999987655 2 23344566789999999986
Q ss_pred CCcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhH
Q 048785 183 IPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKA 260 (280)
Q Consensus 183 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~ 260 (280)
..+..++++++++|+++.++.... ...+.......++..+.+.. ....+.++++++++.++++++ ++.++++++++
T Consensus 249 ~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 326 (345)
T cd08287 249 ESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGP-APVRRYLPELLDDVLAGRINPGRVFDLTLPLDEV 326 (345)
T ss_pred HHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEec-CCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHH
Confidence 458899999999999998875442 11222223344666665533 345678999999999999876 46788999999
Q ss_pred HHHHHHHhcCCCcCcEEEeC
Q 048785 261 EDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 261 ~~a~~~~~~~~~~gkvvi~~ 280 (280)
++|++.+.++... |++|++
T Consensus 327 ~~a~~~~~~~~~~-k~~~~~ 345 (345)
T cd08287 327 AEGYRAMDERRAI-KVLLRP 345 (345)
T ss_pred HHHHHHHhCCCce-EEEeCC
Confidence 9999998876654 998864
No 101
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.4e-31 Score=222.64 Aligned_cols=262 Identities=27% Similarity=0.337 Sum_probs=208.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
++.+.|.++++||+||+.++++|++|+....|..+. ...|.++|||++|+|+++|++++.+++||+|++..
T Consensus 20 ~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 96 (329)
T cd08298 20 TEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCG 96 (329)
T ss_pred EeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCC
Confidence 356677789999999999999999999988887542 24578999999999999999999999999997621
Q ss_pred -------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------
Q 048785 76 -------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------- 125 (280)
Q Consensus 76 -------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------- 125 (280)
+....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ ..++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g 175 (329)
T cd08298 97 ECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYG 175 (329)
T ss_pred CChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEEC
Confidence 111368999999999999999999999999999999999999998 5433
Q ss_pred ----------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-CCccccccccc
Q 048785 126 ----------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-IPWSTFEPNLA 193 (280)
Q Consensus 126 ----------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~ 193 (280)
+++..|++|++++++ ++.+.++++|++.+++.+.. .++++|+++++++. ..++.++++++
T Consensus 176 ~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~vD~vi~~~~~~~~~~~~~~~l~ 247 (329)
T cd08298 176 FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL--------PPEPLDAAIIFAPVGALVPAALRAVK 247 (329)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc--------CCCcccEEEEcCCcHHHHHHHHHHhh
Confidence 888999999998864 78888889999888766432 24569999998764 45889999999
Q ss_pred CCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCc
Q 048785 194 ENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHAT 273 (280)
Q Consensus 194 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 273 (280)
++|+++.+|........+.... ..++..+.+.. ....+.++.++++++++.+++. .++|+++++++|++.+.+++..
T Consensus 248 ~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~~~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~ 324 (329)
T cd08298 248 KGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVA-NLTRQDGEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIR 324 (329)
T ss_pred cCCEEEEEcCCCCCCCccchhh-hhCceEEEEec-CCCHHHHHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCc
Confidence 9999998874321111112222 23444454433 3467788999999999998874 5789999999999999999888
Q ss_pred CcEEE
Q 048785 274 GKIIL 278 (280)
Q Consensus 274 gkvvi 278 (280)
||+++
T Consensus 325 ~~~v~ 329 (329)
T cd08298 325 GAAVL 329 (329)
T ss_pred ceeeC
Confidence 89874
No 102
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.98 E-value=3.9e-30 Score=215.57 Aligned_cols=270 Identities=36% Similarity=0.550 Sum_probs=214.7
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
++.+.|.++++||+|++.++++|+.|+....|.........+|..+|||++|+|+++|++++.+++||+|+++......|
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g 97 (309)
T cd05289 18 ADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGG 97 (309)
T ss_pred cccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCCCCCC
Confidence 46677778999999999999999999998877642111224578999999999999999999999999999873222268
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
+|++|+.++...++++|+++++..++.+++.+.+||+++..... +++..|++|+++++
T Consensus 98 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~ 177 (309)
T cd05289 98 AYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATAS 177 (309)
T ss_pred cceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Confidence 99999999999999999999999999999999999999866432 78889999998886
Q ss_pred CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhhhcc
Q 048785 140 ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFS 219 (280)
Q Consensus 140 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 219 (280)
+.+.+.++++|.+.+++.+...... ...++++|+++||+++.....++++++++|+++.++....... ....+
T Consensus 178 ~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-----~~~~~ 250 (309)
T cd05289 178 AANADFLRSLGADEVIDYTKGDFER--AAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAEQ-----AAKRR 250 (309)
T ss_pred chhHHHHHHcCCCEEEeCCCCchhh--ccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcchh-----hhhhc
Confidence 4477888889988888766544222 3456679999999999888899999999999999885443211 11223
Q ss_pred ceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 220 KKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
+..+......+..+.+.+++++++++.+.+.+++.|++++++++++.+.++...+|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 251 GVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 33333333223367899999999999998888899999999999999998887788874
No 103
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.98 E-value=9.3e-31 Score=220.22 Aligned_cols=271 Identities=26% Similarity=0.336 Sum_probs=213.4
Q ss_pred CCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCc
Q 048785 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGG 82 (280)
Q Consensus 3 ~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~ 82 (280)
+.+.|.+.++||+|++.++++|+.|+....|..+. .+|.++|||++|+|+.+|++++.+++||+|+++. ..|+
T Consensus 18 ~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~----~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---~~g~ 90 (320)
T cd05286 18 DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL----PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG---PPGA 90 (320)
T ss_pred ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC----CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec---CCCc
Confidence 45556688999999999999999999988776542 4567899999999999999999999999999872 2689
Q ss_pred ceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEecC
Q 048785 83 LAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCGA 140 (280)
Q Consensus 83 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~~ 140 (280)
+++++.++.+.++++|++++..+++.++..+++||+++....+ +++.+|++|++++++
T Consensus 91 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~ 170 (320)
T cd05286 91 YAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSS 170 (320)
T ss_pred eeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCC
Confidence 9999999999999999999999999999999999999865432 888999999999864
Q ss_pred -CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhhh
Q 048785 141 -RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLT 217 (280)
Q Consensus 141 -~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 217 (280)
++.+.++++|++++++..... ......+.++++|++|||+++.....++++++++|+++.+|........+....+.
T Consensus 171 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 250 (320)
T cd05286 171 EEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLS 250 (320)
T ss_pred HHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHH
Confidence 778888889999888776544 22334456678999999999988888999999999999987433211111111121
Q ss_pred ccceeeEEEEE---cC----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 218 FSKKQLVPLLV---IP----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 218 ~~~~~~~~~~~---~~----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
.++..+..... .. ..+.+..+++++.++.+.+...+.|++++++++++.+.++...+|+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 251 KGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred hcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 23333332211 11 12445678899999999877778999999999999999988889999875
No 104
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.98 E-value=1.5e-30 Score=220.97 Aligned_cols=272 Identities=30% Similarity=0.381 Sum_probs=211.3
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
+++|.|.+.+++|+|++.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.+++||+|++.......|
T Consensus 21 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g 97 (336)
T cd08252 21 IELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV---PGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPG 97 (336)
T ss_pred ccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC---CCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCc
Confidence 467888889999999999999999999987775431 24567899999999999999999999999999864222468
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhh---------h------------------hhhhCC-CE
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSA---------G------------------LAKLGN-SH 133 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~---------~------------------la~~~G-~~ 133 (280)
+|++|+.++.+.++++|+++++++++.+++.+.+||+++...+ + +|+.+| ++
T Consensus 98 ~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~ 177 (336)
T cd08252 98 SNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLT 177 (336)
T ss_pred cceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcE
Confidence 9999999999999999999999999999999999999874421 2 888999 89
Q ss_pred EEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-CCcccccccccCCcEEEEeCCCchhhHHH
Q 048785 134 VTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-IPWSTFEPNLAENGKVIDLTPTPSAMLTF 211 (280)
Q Consensus 134 Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~ 211 (280)
|+++++ +++.+.++++|++++++++......+....++++|++|||+|+ ..+..++++++++|+++.+|.... .+
T Consensus 178 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~---~~ 254 (336)
T cd08252 178 VIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQE---PL 254 (336)
T ss_pred EEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCCC---cc
Confidence 999986 4788888999999998876422222223344689999999996 568899999999999999985421 11
Q ss_pred HHhhhhccceeeEEEEEc-----------CCHHHHHHHHHHHHCCCeeEecc---ceecchhHHHHHHHHhcCCCcCcEE
Q 048785 212 AWQKLTFSKKQLVPLLVI-----------PKGENLVFLVKLLKEGKIKTLID---SKHLLSKAEDAWAKGADGHATGKII 277 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~g~~~~~~~---~~~~~~~~~~a~~~~~~~~~~gkvv 277 (280)
....+..++..+.+.... ...+.++++++++.+|.+++... ..++++++++|++.+.++...+|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv 334 (336)
T cd08252 255 DLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIV 334 (336)
T ss_pred cchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEE
Confidence 112222334444332211 11356788999999999987543 3579999999999999998889998
Q ss_pred Ee
Q 048785 278 LE 279 (280)
Q Consensus 278 i~ 279 (280)
++
T Consensus 335 ~~ 336 (336)
T cd08252 335 LE 336 (336)
T ss_pred eC
Confidence 74
No 105
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.98 E-value=2.6e-31 Score=224.67 Aligned_cols=262 Identities=29% Similarity=0.396 Sum_probs=204.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee------
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL------ 75 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------ 75 (280)
++.+.|+++++||+||+.++++|++|+....+... ..+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 17 ~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~ 92 (325)
T cd08264 17 EDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKV----KPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGT 92 (325)
T ss_pred EeccCCCCCCCeEEEEEEEEEechHHHHHHhCCCC----CCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCC
Confidence 35667778999999999999999999988764221 23567899999999999999999999999998751
Q ss_pred ------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 76 ------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 76 ------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
+....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. ++
T Consensus 93 c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~ 171 (325)
T cd08264 93 CDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGA 171 (325)
T ss_pred ChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECC
Confidence 11136899999999999999999999999999999999999999854 32
Q ss_pred ----------hhhhCCCEEEEEecCCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCC
Q 048785 126 ----------LAKLGNSHVTATCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAEN 195 (280)
Q Consensus 126 ----------la~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~ 195 (280)
+|+.+|++|+++++ .+.++++|+++++++++........+ +++|+++||+|+..+..++++++++
T Consensus 172 ~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~~~~~l~~~~--~~~d~vl~~~g~~~~~~~~~~l~~~ 246 (325)
T cd08264 172 SGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEVEEKVKEIT--KMADVVINSLGSSFWDLSLSVLGRG 246 (325)
T ss_pred CchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchHHHHHHHHHh--CCCCEEEECCCHHHHHHHHHhhccC
Confidence 88899999988874 36677899988887654211122222 5799999999988788999999999
Q ss_pred cEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCc
Q 048785 196 GKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGK 275 (280)
Q Consensus 196 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk 275 (280)
|+++.+|........++...+..++.++.+.. ...++.++++++++...+ ..+.+.|+++++++|++.+.++...+|
T Consensus 247 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~k 323 (325)
T cd08264 247 GRLVTFGTLTGGEVKLDLSDLYSKQISIIGST-GGTRKELLELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGR 323 (325)
T ss_pred CEEEEEecCCCCCCccCHHHHhhcCcEEEEcc-CCCHHHHHHHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCccc
Confidence 99999885322123333444444555555543 345678999999996544 446678999999999999998877777
Q ss_pred E
Q 048785 276 I 276 (280)
Q Consensus 276 v 276 (280)
+
T Consensus 324 v 324 (325)
T cd08264 324 I 324 (325)
T ss_pred c
Confidence 5
No 106
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=2.5e-30 Score=219.12 Aligned_cols=270 Identities=29% Similarity=0.382 Sum_probs=209.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
++.+.|.+.++||+|++.++++|+.|+.+..|..+.. ..+|.++|+|++|+|+++|++++.+++||+|++.. ..|
T Consensus 18 ~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---~~g 92 (331)
T cd08273 18 VEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT---RVG 92 (331)
T ss_pred eccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCccCCCCCEEEEeC---CCc
Confidence 5678888999999999999999999999888775421 24678999999999999999999999999999873 248
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
+|++|+.++.+.++++|+++++.+++.++.++.+||+++....+ +|+.+|++|+++++
T Consensus 93 ~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~ 172 (331)
T cd08273 93 GNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS 172 (331)
T ss_pred ceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence 99999999999999999999999999999999999999865432 88899999999888
Q ss_pred CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhh---HHHHH---
Q 048785 140 ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAM---LTFAW--- 213 (280)
Q Consensus 140 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~---~~~~~--- 213 (280)
+++.+.++++|+.. ++.+..+.... ...++++|+++||+++.....++++++++|+++.+|...... ..+..
T Consensus 173 ~~~~~~~~~~g~~~-~~~~~~~~~~~-~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 250 (331)
T cd08273 173 ERNHAALRELGATP-IDYRTKDWLPA-MLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGS 250 (331)
T ss_pred HHHHHHHHHcCCeE-EcCCCcchhhh-hccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCccccccchhh
Confidence 66777888898754 44443331111 233457999999999988889999999999999997543211 11100
Q ss_pred -------hhhhccceeeEEEEEc--------CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 214 -------QKLTFSKKQLVPLLVI--------PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 214 -------~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
................ ...+.+..+++++++|.+++.+.+++++++++++++.+.++...||+|+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 251 LLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred hhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 0011111122221111 1246788899999999998888889999999999999998888889886
No 107
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.98 E-value=5.9e-31 Score=220.03 Aligned_cols=270 Identities=26% Similarity=0.395 Sum_probs=211.7
Q ss_pred CCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCcce
Q 048785 5 PVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGGLA 84 (280)
Q Consensus 5 ~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~ 84 (280)
+.|.+.+++++|++.++++|+.|+..+.|..+. ...+|.++|+|++|+|+++|++++++++||+|+++.+ ...|+|+
T Consensus 1 ~~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~g~~~ 77 (303)
T cd08251 1 EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-ESMGGHA 77 (303)
T ss_pred CCCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-CCCccee
Confidence 356788999999999999999999988877542 1256789999999999999999999999999998631 2358999
Q ss_pred eEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEecC-C
Q 048785 85 EFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCGA-R 141 (280)
Q Consensus 85 ~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~~-~ 141 (280)
+|+.++.+.++++|++++++++++++..+++||+++. ..+ +++.+|++|++++++ +
T Consensus 78 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~ 156 (303)
T cd08251 78 TLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDD 156 (303)
T ss_pred eEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 9999999999999999999999999999999999984 332 888999999999864 7
Q ss_pred cHHHHHhcCCCeeecCCCCC-c-ccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCch---h--hHHHHHh
Q 048785 142 NIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPS---A--MLTFAWQ 214 (280)
Q Consensus 142 ~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~---~--~~~~~~~ 214 (280)
+.+.++++|.+.+++..... . .....+.++++|+++||+++..+..++++++++|+++.++.... . .......
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd08251 157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSVLSN 236 (303)
T ss_pred HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhHhhc
Confidence 78888899999998876654 2 23334566789999999988778889999999999998864321 1 1111122
Q ss_pred hhhccceeeEEEEEc---CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 215 KLTFSKKQLVPLLVI---PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 215 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
+..++...+...... ...+.+.++++++.+|.+++...+.|++++++++++.+.++...+|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 237 NQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 223333332222111 1235577888999999998877889999999999999998888888874
No 108
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.98 E-value=2.3e-30 Score=219.33 Aligned_cols=269 Identities=25% Similarity=0.326 Sum_probs=212.6
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee-----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL----- 75 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----- 75 (280)
+++.|.|.+.++|++|++.++++|++|+....|.... ..+|.++|||++|+|+++|++++.+++||+|+...
T Consensus 14 ~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~ 90 (330)
T cd08245 14 PEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG---SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSC 90 (330)
T ss_pred EEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC---CCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCC
Confidence 3577888899999999999999999999988876531 24678999999999999999999999999998421
Q ss_pred --------------------cCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 76 --------------------NHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 76 --------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
+....|+|++|+.++.+.++++|+++++.+++.+++.+.+||.++.. .+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~ 169 (330)
T cd08245 91 GRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVL 169 (330)
T ss_pred CCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEE
Confidence 11136899999999999999999999999999999999999999854 32
Q ss_pred -----------hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-CCcccccccc
Q 048785 126 -----------LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-IPWSTFEPNL 192 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l 192 (280)
+|+.+|++|++++++ ++.+.++++|++.+++.+....... ..+++|++|||+++ .....+++++
T Consensus 170 g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~d~vi~~~~~~~~~~~~~~~l 246 (330)
T cd08245 170 GIGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA---AAGGADVILVTVVSGAAAEAALGGL 246 (330)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh---ccCCCCEEEECCCcHHHHHHHHHhc
Confidence 788899999998864 7788888899988887654331111 22469999999875 4578889999
Q ss_pred cCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCC
Q 048785 193 AENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHA 272 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~ 272 (280)
+++|+++.++........+....+..++.++.+... ...+.++.+++++.++.+.+ ..+.+++++++++|+.+.++..
T Consensus 247 ~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~ 324 (330)
T cd08245 247 RRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTH-GGRADLQEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDV 324 (330)
T ss_pred ccCCEEEEECCCCCCccccchHHHHhCCCEEEEecc-CCHHHHHHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCC
Confidence 999999998754322222212234445556655543 35678889999999999876 4468999999999999999988
Q ss_pred cCcEEE
Q 048785 273 TGKIIL 278 (280)
Q Consensus 273 ~gkvvi 278 (280)
.+|+++
T Consensus 325 ~~~~v~ 330 (330)
T cd08245 325 RFRFVL 330 (330)
T ss_pred CcceeC
Confidence 888875
No 109
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.98 E-value=1.8e-30 Score=219.00 Aligned_cols=276 Identities=29% Similarity=0.401 Sum_probs=215.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC--CC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH--FS 79 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--~~ 79 (280)
+++|.|.+.+++|+|++.++++|++|+....|..+. ...+|.++|||++|+|+++|++++.+++||+|++.... ..
T Consensus 18 ~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~ 95 (325)
T cd08253 18 GDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRR 95 (325)
T ss_pred eecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccccCCC
Confidence 467778889999999999999999999988776532 12467899999999999999999999999999986311 12
Q ss_pred CCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEE
Q 048785 80 GGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTAT 137 (280)
Q Consensus 80 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~ 137 (280)
.|++++|+.++.+.++++|+++++.+++++++++.+||+++....+ +++.+|++|+++
T Consensus 96 ~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~ 175 (325)
T cd08253 96 QGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIAT 175 (325)
T ss_pred CcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Confidence 6899999999999999999999999999999999999999865332 777889999999
Q ss_pred ecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHh
Q 048785 138 CGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQ 214 (280)
Q Consensus 138 ~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 214 (280)
+++ ++.+.+.++|++.+++..... ......+.++++|+++||+++......+++++++|+++.++.... .......
T Consensus 176 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~~~~ 254 (325)
T cd08253 176 ASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGL-RGTIPIN 254 (325)
T ss_pred eCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCC-cCCCChh
Confidence 864 778888889998888776554 222333455689999999999888888899999999998875331 1111112
Q ss_pred hhhccceeeEEEEEc-C----CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 215 KLTFSKKQLVPLLVI-P----KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 215 ~~~~~~~~~~~~~~~-~----~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
.+..++..+.+.... . ..+.++.+.+++.++.+++...+.|++++++++++.+.++...+|+++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 255 PLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 222333344333211 1 23456677788889999887788999999999999999988889999864
No 110
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=1.6e-30 Score=219.06 Aligned_cols=272 Identities=29% Similarity=0.411 Sum_probs=211.5
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
++++.|.+.+++|+||+.++++|+.|+....|..+. ...+|.++|||++|+|+++|++++.+++||+|+++. .+|
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~---~~g 92 (323)
T cd05276 18 GEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALL---AGG 92 (323)
T ss_pred EecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEec---CCC
Confidence 355666788999999999999999999887775531 224678999999999999999999999999999874 358
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
+|++|+.++.+.++++|+++++.++++++..+.++|+++..... +++..|++|+.+++
T Consensus 93 ~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~ 172 (323)
T cd05276 93 GYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAG 172 (323)
T ss_pred ceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcC
Confidence 99999999999999999999999999999999999999865432 78889999998886
Q ss_pred C-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhh
Q 048785 140 A-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKL 216 (280)
Q Consensus 140 ~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 216 (280)
+ ++.+.++++|.+.+++..... ........++++|++|||+|+..+..++++++++|+++.++........+....+
T Consensus 173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~ 252 (323)
T cd05276 173 SEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAKAELDLAPL 252 (323)
T ss_pred CHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCCCCCchHHH
Confidence 5 677888889988888766544 2222334456899999999988888889999999999988743221111112222
Q ss_pred hccceeeEEEEEcC---------CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 217 TFSKKQLVPLLVIP---------KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 217 ~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
..++..+.+..... ..+.+.++++++.++++.+...+.|++++++++++.+.++...+|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 253 LRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 23444444443211 123467788899999998777889999999999999998887888774
No 111
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.97 E-value=1.8e-30 Score=220.39 Aligned_cols=268 Identities=26% Similarity=0.318 Sum_probs=208.4
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec-----
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN----- 76 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----- 76 (280)
++.|.|++.++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 15 ~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~----~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~ 90 (334)
T cd08234 15 EEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA----APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGE 90 (334)
T ss_pred EeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC----CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCC
Confidence 467889999999999999999999999988887642 36789999999999999999999999999987210
Q ss_pred -------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh------------
Q 048785 77 -------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG------------ 125 (280)
Q Consensus 77 -------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~------------ 125 (280)
....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++ ..++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~ 168 (334)
T cd08234 91 CFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGA 168 (334)
T ss_pred CccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC
Confidence 113689999999999999999999999998766 6677888887 4322
Q ss_pred ---------hhhhCCCE-EEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-CCccccccccc
Q 048785 126 ---------LAKLGNSH-VTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-IPWSTFEPNLA 193 (280)
Q Consensus 126 ---------la~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~ 193 (280)
+|+..|++ |+++++ +++.+.++++|++.+++++.........+.++++|++|||++. ..+..++++++
T Consensus 169 g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~ 248 (334)
T cd08234 169 GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYAR 248 (334)
T ss_pred CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHh
Confidence 88899996 777775 4778888889988888876654211134456789999999985 44778899999
Q ss_pred CCcEEEEeCCCch-hhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeE--eccceecchhHHHHHHHHhcC
Q 048785 194 ENGKVIDLTPTPS-AMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKT--LIDSKHLLSKAEDAWAKGADG 270 (280)
Q Consensus 194 ~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~--~~~~~~~~~~~~~a~~~~~~~ 270 (280)
++|+++.+|.... ....+....+..++..+.+.. ...+.+++++++++++++.+ .+...+++++++++++.+.+
T Consensus 249 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~- 325 (334)
T cd08234 249 RGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSF--INPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS- 325 (334)
T ss_pred cCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEec--cCHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-
Confidence 9999999875432 112222222223455555543 24667899999999999864 35678999999999999998
Q ss_pred CCcCcEEE
Q 048785 271 HATGKIIL 278 (280)
Q Consensus 271 ~~~gkvvi 278 (280)
...+|+++
T Consensus 326 ~~~~k~vi 333 (334)
T cd08234 326 GGALKVVV 333 (334)
T ss_pred CCceEEEe
Confidence 77889886
No 112
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=5.3e-30 Score=216.40 Aligned_cols=273 Identities=32% Similarity=0.481 Sum_probs=213.2
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecC--CC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNH--FS 79 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~--~~ 79 (280)
++.+.|.+.+++|+|++.++++|++|+....|.... ....|.++|||++|+|+++|++++.+++||+|+++... ..
T Consensus 18 ~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~ 95 (326)
T cd08272 18 REVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAA--RPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGL 95 (326)
T ss_pred eecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCCcCCC
Confidence 456677788999999999999999999987776431 12347789999999999999999999999999986311 12
Q ss_pred CCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEE
Q 048785 80 GGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTAT 137 (280)
Q Consensus 80 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~ 137 (280)
.|++++|+.++.+.++++|+++++.+++.++..+.+||+++.+..+ +++.+|++|+++
T Consensus 96 ~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~ 175 (326)
T cd08272 96 QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYAT 175 (326)
T ss_pred CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEE
Confidence 6889999999999999999999999999999999999998755332 888999999988
Q ss_pred ecCCcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhh
Q 048785 138 CGARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKL 216 (280)
Q Consensus 138 ~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 216 (280)
+++++.+.++++|.+.+++..... ......+.++++|+++||+++..+..++++++++|+++.++........ ..
T Consensus 176 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~----~~ 251 (326)
T cd08272 176 ASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGATHDLA----PL 251 (326)
T ss_pred echHHHHHHHHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCCccchh----hH
Confidence 865777888889998888764432 1233345567899999999998788899999999999988754311111 11
Q ss_pred hccceeeEEEEEc----------CCHHHHHHHHHHHHCCCeeEecc-ceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 217 TFSKKQLVPLLVI----------PKGENLVFLVKLLKEGKIKTLID-SKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 217 ~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~g~~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
..++..+.+.... ...+.+..+++++.++.+++.++ +.|++++++++++.+.++...+|+++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 252 SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 1334443333211 12467888999999999987765 8999999999999999888888999864
No 113
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=1.6e-30 Score=220.22 Aligned_cols=269 Identities=25% Similarity=0.275 Sum_probs=204.5
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSG 80 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 80 (280)
++++|.|++.++||+||+.++++|+.|.....+......+...+.++|+|++|+|+++|++ .+++||+|+++
T Consensus 22 ~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~------ 93 (329)
T cd05288 22 LVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF------ 93 (329)
T ss_pred EEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc------
Confidence 3577888899999999999999999887655543211111123467899999999999964 79999999875
Q ss_pred CcceeEEeecc-cccccCCCCCC--hhhhcc-cchhHHHHHHHHHhhhh----------------------hhhhCCCEE
Q 048785 81 GGLAEFAMVKE-SLTASRPLEVS--AAEGAG-LPLAGLTALEALTQSAG----------------------LAKLGNSHV 134 (280)
Q Consensus 81 g~~~~~~~v~~-~~~~~~p~~~~--~~~aa~-~~~~~~~a~~~l~~~~~----------------------la~~~G~~V 134 (280)
++|++|+.++. +.++++|++++ +.++++ +++++.+||+++..... +|+..|++|
T Consensus 94 ~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~v 173 (329)
T cd05288 94 LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARV 173 (329)
T ss_pred cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEE
Confidence 48999999999 99999999985 445555 88889999999865432 888999999
Q ss_pred EEEecC-CcHHHHHh-cCCCeeecCCCCC-ccc-ccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhH-
Q 048785 135 TATCGA-RNIEFVKS-LGADEVLDYKTPD-GAA-LKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAML- 209 (280)
Q Consensus 135 i~~~~~-~~~~~~~~-~g~~~v~~~~~~~-~~~-~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~- 209 (280)
++++++ ++.+.+++ +|+++++++++.. ... .... ++++|++|||+|+..+..++++++++|+++.+|.......
T Consensus 174 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~-~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 252 (329)
T cd05288 174 VGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA-PDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNAT 252 (329)
T ss_pred EEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhc-cCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccc
Confidence 999865 77888877 9999999887654 222 2233 4689999999999888899999999999999874432211
Q ss_pred ----HHHHhhhhccceeeEEEEEcCC----HHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 210 ----TFAWQKLTFSKKQLVPLLVIPK----GENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 210 ----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
.++......++.++.+...... .+.+.++++++.+|.+++....++++++++++++.+.+++..+|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 253 EPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 0112233445666655443222 35678889999999998766677999999999999998888888874
No 114
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.97 E-value=6.8e-30 Score=215.88 Aligned_cols=274 Identities=21% Similarity=0.254 Sum_probs=209.4
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEee---cC
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAIL---NH 77 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~ 77 (280)
++++|.|+++++||+|++.++++|++|.....|.... ...+|.++|||++|+|++ ++++.+++||+|++.. +.
T Consensus 17 ~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~ 92 (324)
T cd08288 17 LRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWGVGE 92 (324)
T ss_pred EEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCccCCC
Confidence 3578899999999999999999999999988776421 123567899999999998 7778899999999852 11
Q ss_pred CCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhh-------hh------------------hhhhCCC
Q 048785 78 FSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQS-------AG------------------LAKLGNS 132 (280)
Q Consensus 78 ~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~-------~~------------------la~~~G~ 132 (280)
...|+|++|+.++.+.++++|+++++++++++++.+++|+.++... .+ +|+.+|+
T Consensus 93 ~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~ 172 (324)
T cd08288 93 RHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY 172 (324)
T ss_pred CCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC
Confidence 2368999999999999999999999999999999999998776411 11 8899999
Q ss_pred EEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHH
Q 048785 133 HVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTF 211 (280)
Q Consensus 133 ~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~ 211 (280)
+|+++++ +++.+.++++|+++++++++.... +......++|.+||++++..+..++..++.+|+++.+|.........
T Consensus 173 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~~~~~ 251 (324)
T cd08288 173 EVVASTGRPEEADYLRSLGASEIIDRAELSEP-GRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGADLPT 251 (324)
T ss_pred eEEEEeCCHHHHHHHHhcCCCEEEEcchhhHh-hhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCCCCCc
Confidence 9998885 588899999999999987654332 22223335899999999866777788889999999887432111112
Q ss_pred HHhhhhccceeeEEEEEc-----CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 212 AWQKLTFSKKQLVPLLVI-----PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
....+..++.++.+.... ...+.+..+.+++.++.+++ +.+.++++++++|++.+.+++..+|+++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 252 TVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred chhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 222232455555554221 12346777788888998876 467999999999999999999999999864
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=2.1e-29 Score=212.66 Aligned_cols=273 Identities=28% Similarity=0.396 Sum_probs=212.0
Q ss_pred CCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCc
Q 048785 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGG 82 (280)
Q Consensus 3 ~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~ 82 (280)
+.+.|.+++++++|++.++++|+.|+....|..+. +..+|.++|||++|+|+.+|+++..+++||+|++.. .+|+
T Consensus 19 ~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~---~~~~ 93 (325)
T TIGR02824 19 EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP--PPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV---AGGG 93 (325)
T ss_pred eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc---CCCc
Confidence 44555688999999999999999999887775532 124578999999999999999999999999999863 3589
Q ss_pred ceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEecC
Q 048785 83 LAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCGA 140 (280)
Q Consensus 83 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~~ 140 (280)
+++++.++.+.++++|+++++.++++++.++.+||+++..... +++.+|++|++++++
T Consensus 94 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~ 173 (325)
T TIGR02824 94 YAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGS 173 (325)
T ss_pred ceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence 9999999999999999999999999999999999998754332 888999999988864
Q ss_pred -CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhhh
Q 048785 141 -RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLT 217 (280)
Q Consensus 141 -~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 217 (280)
++.+.++++|.+.+++..... ........++++|++++|+|+..+..++++++++|+++.++........+....+.
T Consensus 174 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 253 (325)
T TIGR02824 174 DEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLL 253 (325)
T ss_pred HHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHH
Confidence 677778889988777765433 22223344567999999999877888999999999999987433111122222222
Q ss_pred ccceeeEEEEEcC---------CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 218 FSKKQLVPLLVIP---------KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 218 ~~~~~~~~~~~~~---------~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
.++..+.+..... ..+.+.+++++++++.+.+..++.+++++++++++.+.++...+|+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 254 AKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 4555555544211 12345667889999999877888999999999999999888888999864
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=3.2e-29 Score=211.74 Aligned_cols=277 Identities=25% Similarity=0.326 Sum_probs=212.0
Q ss_pred CCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec--CCC
Q 048785 2 VHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN--HFS 79 (280)
Q Consensus 2 ~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~--~~~ 79 (280)
++.+.|.+++++++|++.++++|+.|+....|..... ..+|.++|||++|+|+.+|++++++++||+|+++.. ...
T Consensus 18 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~ 95 (328)
T cd08268 18 EELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQ 95 (328)
T ss_pred eecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccccCC
Confidence 3566677899999999999999999998877765421 244778999999999999999999999999998632 123
Q ss_pred CCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEE
Q 048785 80 GGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTAT 137 (280)
Q Consensus 80 ~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~ 137 (280)
.|++++|+.++.+.++++|+++++++++.+++.+.+||+++..... +++..|++++.+
T Consensus 96 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~ 175 (328)
T cd08268 96 YGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIAT 175 (328)
T ss_pred CccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE
Confidence 5899999999999999999999999999999999999999865432 778889999998
Q ss_pred ecC-CcHHHHHhcCCCeeecCCCCC-c-ccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHh
Q 048785 138 CGA-RNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQ 214 (280)
Q Consensus 138 ~~~-~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 214 (280)
+++ ++.+.+.++|.+.+++.+... . .......++++|++++|+++.....++++++++|+++.+|........+...
T Consensus 176 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 255 (328)
T cd08268 176 TRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEPTPFPLK 255 (328)
T ss_pred cCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCCCCCCchH
Confidence 854 677777888988888766544 1 2233345567999999999988888999999999999887433211111112
Q ss_pred hhhccceeeEEEEEc-------CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 215 KLTFSKKQLVPLLVI-------PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 215 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
....++..+.+.... ...+.++.+.+++.++.+.+.....|+++++.++++.+.++...+|+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 256 AALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 123344444443321 112345566677888888877778899999999999999888888999864
No 117
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.97 E-value=1.9e-29 Score=211.26 Aligned_cols=239 Identities=25% Similarity=0.356 Sum_probs=191.0
Q ss_pred CCCCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----
Q 048785 1 HVHVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---- 76 (280)
Q Consensus 1 ~~~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---- 76 (280)
+++++.|++.++||+|++.++++|++|+....|... +...|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 16 ~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 92 (306)
T cd08258 16 LREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTC 92 (306)
T ss_pred EeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCC
Confidence 357888999999999999999999999998877652 1245689999999999999999999999999988531
Q ss_pred ---------------------CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------
Q 048785 77 ---------------------HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------- 125 (280)
Q Consensus 77 ---------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------- 125 (280)
....|+|++|+.++.+.++++|+++++++++ ++..+++||+++....+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~ 171 (306)
T cd08258 93 GRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVF 171 (306)
T ss_pred CCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEE
Confidence 1135899999999999999999999999887 66677799999866533
Q ss_pred -----------hhhhCCCEEEEEec--C-CcHHHHHhcCCCeeecCCCCC-c-ccccCCCCCcccEEEECCCC-CCcccc
Q 048785 126 -----------LAKLGNSHVTATCG--A-RNIEFVKSLGADEVLDYKTPD-G-AALKSPSGRKYDAVIHCARG-IPWSTF 188 (280)
Q Consensus 126 -----------la~~~G~~Vi~~~~--~-~~~~~~~~~g~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~-~~~~~~ 188 (280)
+|+.+|++|+.+++ + ++.++++++|++++ +++..+ . .......++++|++|||+|+ ..+...
T Consensus 172 g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~ 250 (306)
T cd08258 172 GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQA 250 (306)
T ss_pred CCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHH
Confidence 88999999888742 3 46778888999878 766554 2 23334556789999999975 457788
Q ss_pred cccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCC
Q 048785 189 EPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEG 245 (280)
Q Consensus 189 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g 245 (280)
+++++++|+++.+|........+....+.+++.++.+... .+.++++++++++++|
T Consensus 251 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 251 LELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRS-STPASWETALRLLASG 306 (306)
T ss_pred HHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEec-CchHhHHHHHHHHhcC
Confidence 9999999999999865433344455666678999998774 5688899999999876
No 118
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=5.3e-29 Score=206.80 Aligned_cols=258 Identities=28% Similarity=0.320 Sum_probs=202.4
Q ss_pred CeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCcceeEEeecc
Q 048785 12 DEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKE 91 (280)
Q Consensus 12 ~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~ 91 (280)
+||+||+.++++|++|+....|..+ .+|.++|||++|+|+++|++++.+++||+|+++ ..|+|++|+.++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~-----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~----~~g~~~~~~~~~~ 71 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP-----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL----APGAFATHVRVDA 71 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC-----CCCCccceeeeEEEEeecCCccCCCCCCEEEEE----ecCcccceEEech
Confidence 5899999999999999998877652 457899999999999999999999999999987 3689999999999
Q ss_pred cccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEecC-CcHHHHHh
Q 048785 92 SLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCGA-RNIEFVKS 148 (280)
Q Consensus 92 ~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~~-~~~~~~~~ 148 (280)
+.++++|+++++.+++.+++++.+||.++..... +++.+|++|++++++ ++.+.+++
T Consensus 72 ~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 151 (293)
T cd05195 72 RLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRE 151 (293)
T ss_pred hheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999999999855332 788999999999865 77888888
Q ss_pred cC--CCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchh---hH--HHHHhhhhcc
Q 048785 149 LG--ADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSA---ML--TFAWQKLTFS 219 (280)
Q Consensus 149 ~g--~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~---~~--~~~~~~~~~~ 219 (280)
.| ++.+++++... ......+.++++|.++||+|+..+..++++++++|+++.++..... .. ....+...++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd05195 152 LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLRNVSFS 231 (293)
T ss_pred hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhccCCeEE
Confidence 87 67788765543 2233345567899999999998889999999999999988744321 11 1111112222
Q ss_pred ceeeEEEEE---cCCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 220 KKQLVPLLV---IPKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 220 ~~~~~~~~~---~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
...+..... ....+.+..++++++++++++..+..+++++++++++.+.++...+|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 232 SVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred EEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 222211110 01234678889999999999888889999999999999998888788764
No 119
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=1.9e-28 Score=208.03 Aligned_cols=273 Identities=29% Similarity=0.346 Sum_probs=206.6
Q ss_pred CCCCCCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCc
Q 048785 3 HVPVPTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGG 82 (280)
Q Consensus 3 ~~~~~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~ 82 (280)
+.+.|.++++||+|++.++++|+.|+....|.... ....|.++|||++|+|+.+|+++.++++||+|+++. ..|+
T Consensus 18 ~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---~~~~ 92 (337)
T cd08275 18 KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT---RFGG 92 (337)
T ss_pred ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec---CCCe
Confidence 55667788999999999999999999988776532 124467899999999999999999999999999874 3589
Q ss_pred ceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhC-CCEEEEEec
Q 048785 83 LAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLG-NSHVTATCG 139 (280)
Q Consensus 83 ~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~-G~~Vi~~~~ 139 (280)
|++|+.++.+.++++|+++++.+++.+++.+.+||+++....+ +|+.+ +..++...+
T Consensus 93 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~~ 172 (337)
T cd08275 93 YAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTAS 172 (337)
T ss_pred eeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeCC
Confidence 9999999999999999999999999999999999999865432 55665 323322222
Q ss_pred CCcHHHHHhcCCCeeecCCCCC-cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchh---hH------
Q 048785 140 ARNIEFVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSA---ML------ 209 (280)
Q Consensus 140 ~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~---~~------ 209 (280)
+++.+.++++|++.+++.+... ...+....++++|+++||+|+.....++++++++|+++.+|..... ..
T Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~ 252 (337)
T cd08275 173 ASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLA 252 (337)
T ss_pred HHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccc
Confidence 3477888889998888876554 2222222246799999999998888899999999999998743311 11
Q ss_pred -------HHHHhhhhccceeeEEEEEc----C---CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCc
Q 048785 210 -------TFAWQKLTFSKKQLVPLLVI----P---KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGK 275 (280)
Q Consensus 210 -------~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk 275 (280)
.+.......++..+.+.... . ....+.++++++.++.+++.....|++++++++++.+.++...+|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 332 (337)
T cd08275 253 KKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGK 332 (337)
T ss_pred cccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcce
Confidence 01112223444444444321 0 123567888999999998777789999999999999998888899
Q ss_pred EEEeC
Q 048785 276 IILEP 280 (280)
Q Consensus 276 vvi~~ 280 (280)
+++++
T Consensus 333 vv~~~ 337 (337)
T cd08275 333 VVLTP 337 (337)
T ss_pred EEEeC
Confidence 99875
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.96 E-value=5.2e-28 Score=203.82 Aligned_cols=271 Identities=31% Similarity=0.423 Sum_probs=210.2
Q ss_pred CCCCCCCC-CCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCC
Q 048785 3 HVPVPTPR-KDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGG 81 (280)
Q Consensus 3 ~~~~~~~~-~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g 81 (280)
+.+ |.+. +++++|++.++++|+.|+....|.... ....|.++|+|++|+|+.+|++++.+++||+|+++. ..|
T Consensus 19 ~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---~~~ 92 (323)
T cd08241 19 EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT---GQG 92 (323)
T ss_pred cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec---CCc
Confidence 445 5555 599999999999999999987776531 113466899999999999999999999999999873 268
Q ss_pred cceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec
Q 048785 82 GLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG 139 (280)
Q Consensus 82 ~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~ 139 (280)
++++++.++.+.++++|+++++.++++++..+.+||+++..... +++..|++|+.+++
T Consensus 93 ~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~ 172 (323)
T cd08241 93 GFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAAS 172 (323)
T ss_pred eeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999998898899999998864322 78889999999986
Q ss_pred C-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchhhHHHHHhhh
Q 048785 140 A-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKL 216 (280)
Q Consensus 140 ~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 216 (280)
+ ++.+.++++|.+.+++..... ......+.++++|+++||+|+..+..++++++++|+++.++........+.....
T Consensus 173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 252 (323)
T cd08241 173 SEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPANLL 252 (323)
T ss_pred CHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHH
Confidence 4 778888889988888766544 2233345566899999999987788899999999999988743321110111122
Q ss_pred hccceeeEEEEEcC--------CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 217 TFSKKQLVPLLVIP--------KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 217 ~~~~~~~~~~~~~~--------~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
..++..+.+..... ..+.+.++++++.++.+.+.....|++++++++++.+.++...+|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 253 LLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred hhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 33455555443211 2356788999999999988778899999999999999988888898864
No 121
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.96 E-value=1.4e-29 Score=209.43 Aligned_cols=214 Identities=16% Similarity=0.165 Sum_probs=169.9
Q ss_pred cccccceEEEEEeCCCCC------CCCCCCEEEEeec------------------------C-------CCCCcceeEEe
Q 048785 46 IPATDVAGEIIEVGSEVK------NFKAGYNVVAILN------------------------H-------FSGGGLAEFAM 88 (280)
Q Consensus 46 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~------------------------~-------~~~g~~~~~~~ 88 (280)
++|||++|+|+++|++|+ ++++||||+.... . ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 8999999976310 0 12599999999
Q ss_pred eccc-ccccCCCCCChhhhcccchhHHHHHHHHHhhhh--------------------hhhhCCCE-EEEEec-CCcHHH
Q 048785 89 VKES-LTASRPLEVSAAEGAGLPLAGLTALEALTQSAG--------------------LAKLGNSH-VTATCG-ARNIEF 145 (280)
Q Consensus 89 v~~~-~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~--------------------la~~~G~~-Vi~~~~-~~~~~~ 145 (280)
+|+. .++++|+++++++++.+++++.|||+++.+... +|+.+|++ |+++++ ++|.++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 9997 699999999999999999999999999855321 88899995 888874 478899
Q ss_pred HHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEeCCCc-hhhHHHHHhhhhccceee
Q 048785 146 VKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTPTP-SAMLTFAWQKLTFSKKQL 223 (280)
Q Consensus 146 ~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~ 223 (280)
++++|++.++++++........+.++++|++|||+|++. ++.++++++++|+++.+|... .....++...+.++++++
T Consensus 161 a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~~i 240 (280)
T TIGR03366 161 ALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWLTI 240 (280)
T ss_pred HHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCcEE
Confidence 999999999887553222333445678999999999764 889999999999999998543 223345566677788888
Q ss_pred EEEEEcCCHHHHHHHHHHHHCC--Ce--eEeccceecchhH
Q 048785 224 VPLLVIPKGENLVFLVKLLKEG--KI--KTLIDSKHLLSKA 260 (280)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~i~~g--~~--~~~~~~~~~~~~~ 260 (280)
.+.. ....++++++++++.++ ++ +++++++|+++++
T Consensus 241 ~g~~-~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 241 RGVH-NYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred EecC-CCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 8865 34567899999999985 43 4678899999863
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=8.8e-28 Score=199.16 Aligned_cols=252 Identities=24% Similarity=0.296 Sum_probs=195.7
Q ss_pred EEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCcceeEEeecccccc
Q 048785 16 LKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTA 95 (280)
Q Consensus 16 V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~ 95 (280)
||+.++++|++|+....|..+ .|.++|+|++|+|+++|++++.+++||+|+++ ..|+|++|+.++.+.++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~------~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~----~~g~~~~~~~~~~~~~~ 71 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP------GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL----APGSFATYVRTDARLVV 71 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC------CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE----cCCceeeEEEccHHHeE
Confidence 789999999999998877653 35789999999999999999999999999987 36899999999999999
Q ss_pred cCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEec-CCcHHHHHhcCC-
Q 048785 96 SRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCG-ARNIEFVKSLGA- 151 (280)
Q Consensus 96 ~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~-~~~~~~~~~~g~- 151 (280)
++|+++++.+++++++.+.++|.++..... +++.+|++|+++++ +++.+.++++|+
T Consensus 72 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 151 (288)
T smart00829 72 PIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIP 151 (288)
T ss_pred ECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 999999999999999999999999844332 78889999999995 478888889998
Q ss_pred -CeeecCCCCCc-c-cccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCchh-hHHHHHhhhhccceeeEEEE
Q 048785 152 -DEVLDYKTPDG-A-ALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPSA-MLTFAWQKLTFSKKQLVPLL 227 (280)
Q Consensus 152 -~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 227 (280)
+.+++++.... . ......++++|+++|++++..+..++++++++|+++.+|..+.. ........ ..++..+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~ 230 (288)
T smart00829 152 DDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVD 230 (288)
T ss_pred hhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEE
Confidence 77787765442 2 22334556799999999987788899999999999998754311 01111111 12222322222
Q ss_pred E-----c--CCHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 228 V-----I--PKGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 228 ~-----~--~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
. . ...+.+..++++++++++.+...+.|++++++++++.+..+...+|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 231 LDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred HHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 1 1 1234577888999999988766688999999999999998877778764
No 123
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.95 E-value=1.5e-26 Score=190.30 Aligned_cols=226 Identities=31% Similarity=0.375 Sum_probs=178.3
Q ss_pred eEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeec----------------
Q 048785 13 EVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILN---------------- 76 (280)
Q Consensus 13 evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------- 76 (280)
||+|++.++++|+.|+....|..+ ....+|.++|+|++|+|+++|++++.+++||+|++...
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 78 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG 78 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence 689999999999999999888754 12356789999999999999999999999999998642
Q ss_pred ----CCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh---------------------hhhhCC
Q 048785 77 ----HFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG---------------------LAKLGN 131 (280)
Q Consensus 77 ----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~---------------------la~~~G 131 (280)
....|+|++|+.++.+.++++|+++++++++.++..+.+||+++..... +++..|
T Consensus 79 ~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g 158 (271)
T cd05188 79 GILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAG 158 (271)
T ss_pred CEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 1236899999999999999999999999999999999999999855432 778889
Q ss_pred CEEEEEecC-CcHHHHHhcCCCeeecCCCCCc-ccccCCCCCcccEEEECCCC-CCcccccccccCCcEEEEeCCCchhh
Q 048785 132 SHVTATCGA-RNIEFVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVIHCARG-IPWSTFEPNLAENGKVIDLTPTPSAM 208 (280)
Q Consensus 132 ~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~ 208 (280)
.+|++++++ ++.+.++++|++.++++.+... .......++++|++|||+++ .....++++++++|+++.++......
T Consensus 159 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 238 (271)
T cd05188 159 ARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP 238 (271)
T ss_pred CeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC
Confidence 999999965 7788888899888887765541 11114456789999999998 66888999999999999998554322
Q ss_pred HHHHHhhhhccceeeEEEEEcCCHHHHHHHHHH
Q 048785 209 LTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKL 241 (280)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (280)
..........++..+.+... ...+++++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 270 (271)
T cd05188 239 PLDDLRRLLFKELTIIGSTG-GTREDFEEALDL 270 (271)
T ss_pred CcccHHHHHhcceEEEEeec-CCHHHHHHHHhh
Confidence 22123344557777777653 356677777665
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=3.5e-26 Score=180.01 Aligned_cols=264 Identities=22% Similarity=0.229 Sum_probs=203.8
Q ss_pred CCCCCCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCcccc----ccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCc
Q 048785 7 PTPRKDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPA----TDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGG 82 (280)
Q Consensus 7 ~~~~~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~ 82 (280)
.++++++|+||..|-+.+|.....+....+..+ -.|+.+| ..++|+|++ ++-+.+++||.|+++. +
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y--~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~------g 102 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDY--APPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV------G 102 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccc--cCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec------c
Confidence 347889999999999999988776654433211 1122332 378999999 5667799999999985 7
Q ss_pred ceeEEeeccccc--ccCCC--CCChhhhc-ccchhHHHHHHHHHhhhh----------------------hhhhCCCEEE
Q 048785 83 LAEFAMVKESLT--ASRPL--EVSAAEGA-GLPLAGLTALEALTQSAG----------------------LAKLGNSHVT 135 (280)
Q Consensus 83 ~~~~~~v~~~~~--~~~p~--~~~~~~aa-~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi 135 (280)
|.||.+++++.. +++|. ++...-.. ++..+++|||.++...+. +|+.+|+.|+
T Consensus 103 Weeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VV 182 (343)
T KOG1196|consen 103 WEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVV 182 (343)
T ss_pred ceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEE
Confidence 999988887544 44443 33322222 235677899999987655 9999999999
Q ss_pred EEec-CCcHHHHH-hcCCCeeecCCCCC--cccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCch-----
Q 048785 136 ATCG-ARNIEFVK-SLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTPS----- 206 (280)
Q Consensus 136 ~~~~-~~~~~~~~-~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~----- 206 (280)
+.+. +++..+++ ++|.+..+||.++. ..++.....+++|+.||.+|+..++..+..|+..||++.+|.-+.
T Consensus 183 GsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~~~ 262 (343)
T KOG1196|consen 183 GSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNLEN 262 (343)
T ss_pred EecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccccC
Confidence 9995 58888885 67999999999885 567777888999999999999999999999999999999984331
Q ss_pred hhHHHHHhhhhccceeeEEEEEcCC----HHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 207 AMLTFAWQKLTFSKKQLVPLLVIPK----GENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
...-.....+..+++++.++..... .+.++.+..++++|+|+-.-+-.-.|++.+.||.-|.+|.+.||.++++
T Consensus 263 ~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 263 PEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred CccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccceEEEe
Confidence 1122234566788999988765332 4566788899999999987776677999999999999999999999874
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.93 E-value=1.7e-24 Score=178.95 Aligned_cols=224 Identities=25% Similarity=0.292 Sum_probs=169.3
Q ss_pred CCCCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHH
Q 048785 40 PRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEA 119 (280)
Q Consensus 40 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~ 119 (280)
+..+|.++|+|++|+|+++|++++.+++||+|+++ ++|++|+.++.+.++++|+++++.+++++ ..+++||++
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~ 89 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNG 89 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHH
Confidence 44688999999999999999999999999999986 36999999999999999999999999888 788899999
Q ss_pred HHhhhh---------------------hhhhCCCE-EEEEecC-CcHHHHHhcC-CCeeecCCCCCcccccCCCCCcccE
Q 048785 120 LTQSAG---------------------LAKLGNSH-VTATCGA-RNIEFVKSLG-ADEVLDYKTPDGAALKSPSGRKYDA 175 (280)
Q Consensus 120 l~~~~~---------------------la~~~G~~-Vi~~~~~-~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~d~ 175 (280)
+. ..+ +|+.+|++ |++++++ ++.++++++| ++.+++... ..+.++++|+
T Consensus 90 ~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~d~ 162 (277)
T cd08255 90 VR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA------DEIGGRGADV 162 (277)
T ss_pred HH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch------hhhcCCCCCE
Confidence 74 332 78889997 9999864 7888888998 555554322 1124567999
Q ss_pred EEECCCC-CCcccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEc-----------CCHHHHHHHHHHHH
Q 048785 176 VIHCARG-IPWSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVI-----------PKGENLVFLVKLLK 243 (280)
Q Consensus 176 v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~ 243 (280)
+|||++. ..+..++++++++|+++.+|..... .......+..+...+.+.... ...+.++++++++.
T Consensus 163 vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 241 (277)
T cd08255 163 VIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLA 241 (277)
T ss_pred EEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHH
Confidence 9999886 4577889999999999998754332 100011111122222222110 12357889999999
Q ss_pred CCCeeEeccceecchhHHHHHHHHhcC-CCcCcEEE
Q 048785 244 EGKIKTLIDSKHLLSKAEDAWAKGADG-HATGKIIL 278 (280)
Q Consensus 244 ~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi 278 (280)
++++++.+.+.|+++++++|++.+.++ ....|+++
T Consensus 242 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 242 EGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 999988888899999999999999876 34456653
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.91 E-value=1.7e-24 Score=195.34 Aligned_cols=258 Identities=19% Similarity=0.205 Sum_probs=208.9
Q ss_pred CCCCeEEEEEeeeecChhhHHhHhccCCCC-CCC---CCCccccccceEEEEEeCCCCCCCCCCCEEEEeecCCCCCcce
Q 048785 9 PRKDEVLLKVEASSLNAFDWKIKKGVARPI-LPR---KFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAILNHFSGGGLA 84 (280)
Q Consensus 9 ~~~~evlV~v~~~~i~~~d~~~~~g~~~~~-~~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~ 84 (280)
..++.=+..|.|+.||..|+.+..|..++. .|. ..-+.+|-||+|+ .+-|.||+++. ..-+++
T Consensus 1442 ~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mv---pAksLA 1508 (2376)
T KOG1202|consen 1442 TCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMV---PAKSLA 1508 (2376)
T ss_pred CCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEee---ehhhhh
Confidence 455667899999999999999999987542 122 2347899999997 45599999987 466899
Q ss_pred eEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh----------------------hhhhCCCEEEEEecC-C
Q 048785 85 EFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------------LAKLGNSHVTATCGA-R 141 (280)
Q Consensus 85 ~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------------la~~~G~~Vi~~~~~-~ 141 (280)
+.+.++.+.+|.+|....+++|++.|+.|.||||||..+.+ +|.+.|++|+.++.+ +
T Consensus 1509 Tt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaE 1588 (2376)
T KOG1202|consen 1509 TTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAE 1588 (2376)
T ss_pred hhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHH
Confidence 99999999999999999999999999999999999977654 777889999999955 8
Q ss_pred cHHHHHh----cCCCeeecCCCCCcc--cccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCc-----hhhHH
Q 048785 142 NIEFVKS----LGADEVLDYKTPDGA--ALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTP-----SAMLT 210 (280)
Q Consensus 142 ~~~~~~~----~g~~~v~~~~~~~~~--~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~-----~~~~~ 210 (280)
+++++.+ +...++-|+++.+++ .+..+.|+|+|+|++....+.++..++||+.+||+..+|-.+ ...+.
T Consensus 1589 KRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMa 1668 (2376)
T KOG1202|consen 1589 KREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMA 1668 (2376)
T ss_pred HHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcchhh
Confidence 8888864 345677788887743 456789999999999999999999999999999999888333 23456
Q ss_pred HHHhhhhccceeeEEEEEcCCHHHHHHHHHHHH----CCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEeC
Q 048785 211 FAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLK----EGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILEP 280 (280)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 280 (280)
.+.++.+++++-+..+. .+..++..++..+++ +|.++|+.+++|+-.++++||+.|.+|++.||||+++
T Consensus 1669 vfLkNvsfHGiLLDsvm-ege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1669 VFLKNVSFHGILLDSVM-EGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred hhhcccceeeeehhhhh-cCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 66666666666555433 345566666666555 4578999999999999999999999999999999974
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.81 E-value=1.6e-19 Score=127.69 Aligned_cols=85 Identities=34% Similarity=0.497 Sum_probs=70.8
Q ss_pred CCeEEEEEeeeecChhhHHhHhccCCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEe----------------
Q 048785 11 KDEVLLKVEASSLNAFDWKIKKGVARPILPRKFPYIPATDVAGEIIEVGSEVKNFKAGYNVVAI---------------- 74 (280)
Q Consensus 11 ~~evlV~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---------------- 74 (280)
|+||+||+.++|||++|+.++.|... ....+|.++|||++|+|+++|++++.|++||+|++.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPP--PPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSS--STSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccc--cCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 68999999999999999999998521 234789999999999999999999999999999873
Q ss_pred --------ecCCCCCcceeEEeecccccccC
Q 048785 75 --------LNHFSGGGLAEFAMVKESLTASR 97 (280)
Q Consensus 75 --------~~~~~~g~~~~~~~v~~~~~~~~ 97 (280)
.+....|+|+||+.+|++.++++
T Consensus 79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 22246899999999999998874
No 128
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.66 E-value=1.9e-16 Score=115.25 Aligned_cols=120 Identities=31% Similarity=0.402 Sum_probs=80.3
Q ss_pred cCCCeeecCCCCCcccccCCCCCcccEEEECCC--CCCc-ccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEE
Q 048785 149 LGADEVLDYKTPDGAALKSPSGRKYDAVIHCAR--GIPW-STFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVP 225 (280)
Q Consensus 149 ~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 225 (280)
+|+++++||++.+. +..++||+||||+| ++.+ ..+.++| ++|+++.++. .......... ....+...
T Consensus 1 LGAd~vidy~~~~~-----~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~~~~~~~~~---~~~~~~~~ 70 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-----AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DLPSFARRLK---GRSIRYSF 70 (127)
T ss_dssp CT-SEEEETTCSHH-----HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HHHHHHHHHH---CHHCEEEC
T ss_pred CCcCEEecCCCccc-----cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cccchhhhhc---ccceEEEE
Confidence 68999999985434 45678999999999 5444 7888999 9999999984 1111111111 12222222
Q ss_pred EEE-cC---CHHHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEE
Q 048785 226 LLV-IP---KGENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIIL 278 (280)
Q Consensus 226 ~~~-~~---~~~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 278 (280)
+.. .. ..+.++++.+++++|+++|.+.++|||+++++|++.+.+++..||+||
T Consensus 71 ~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 71 LFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 221 11 345699999999999999999999999999999999999999999996
No 129
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.52 E-value=5.6e-15 Score=107.95 Aligned_cols=119 Identities=26% Similarity=0.334 Sum_probs=99.0
Q ss_pred hhhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCC--cccccCCCCCcccEEEECCC-CCCcccccccccCCcEEEE
Q 048785 125 GLAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVIHCAR-GIPWSTFEPNLAENGKVID 200 (280)
Q Consensus 125 ~la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~g~~v~ 200 (280)
.+|+.+|++|++++++ ++.++++++|+++++++++.+ ....+.++++++|++|||+| ...++.++++++++|+++.
T Consensus 8 q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 87 (130)
T PF00107_consen 8 QLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLRPGGRIVV 87 (130)
T ss_dssp HHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhccCCEEEE
Confidence 3788999999999975 789999999999999998876 33445566679999999999 4669999999999999999
Q ss_pred eCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHC
Q 048785 201 LTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKE 244 (280)
Q Consensus 201 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 244 (280)
+|........++...+++++.++.++.. .+.++++++++++.+
T Consensus 88 vg~~~~~~~~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 88 VGVYGGDPISFNLMNLMFKEITIRGSWG-GSPEDFQEALQLLAQ 130 (130)
T ss_dssp ESSTSTSEEEEEHHHHHHTTEEEEEESS-GGHHHHHHHHHHHH-
T ss_pred EEccCCCCCCCCHHHHHhCCcEEEEEcc-CCHHHHHHHHHHhcC
Confidence 9977755666677888889999998764 457889999988763
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.61 E-value=9e-08 Score=82.28 Aligned_cols=141 Identities=9% Similarity=-0.006 Sum_probs=101.7
Q ss_pred hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccc-cccccCCcEEEEeC
Q 048785 126 LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTF-EPNLAENGKVIDLT 202 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~-~~~l~~~g~~v~~g 202 (280)
.++.+|++|++++. +.+.+.++.+|++.+ +. .+.. +++|++|+|+|++. +... +..++++|+++.+|
T Consensus 220 ~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~~----~e~v-----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG 289 (413)
T cd00401 220 SLRGQGARVIVTEVDPICALQAAMEGYEVM-TM----EEAV-----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIG 289 (413)
T ss_pred HHHHCCCEEEEEECChhhHHHHHhcCCEEc-cH----HHHH-----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeC
Confidence 77889999999885 578888889998533 21 1111 24799999999866 6654 89999999999998
Q ss_pred CCchhhHHHHHhhhhccceeeEEEEEcCCHHHHH--HHHHHHHCCCe---eEeccce-----ecch-hHHHHHHHHhcCC
Q 048785 203 PTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLV--FLVKLLKEGKI---KTLIDSK-----HLLS-KAEDAWAKGADGH 271 (280)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~g~~---~~~~~~~-----~~~~-~~~~a~~~~~~~~ 271 (280)
..+ ..++...+..++.++.+.........++ +.++++++|++ .+.++|. ++|+ |+.++++.+.++.
T Consensus 290 ~~~---~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~ 366 (413)
T cd00401 290 HFD---VEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRD 366 (413)
T ss_pred CCC---CccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCC
Confidence 542 3455555666777777654322222455 78999999988 5677777 8898 9999999998765
Q ss_pred Cc-CcEEEe
Q 048785 272 AT-GKIILE 279 (280)
Q Consensus 272 ~~-gkvvi~ 279 (280)
.. .|+++.
T Consensus 367 ~~~~kV~~~ 375 (413)
T cd00401 367 KYEVGVYFL 375 (413)
T ss_pred cCCCcEEEC
Confidence 43 466654
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.35 E-value=3.1e-06 Score=74.79 Aligned_cols=122 Identities=16% Similarity=0.130 Sum_probs=83.1
Q ss_pred hhhhCCCEEEEEec-CCcHHHHHhcCCCee-ecCCCCCc--c--cccCC-----------C--CCcccEEEECCCCCC--
Q 048785 126 LAKLGNSHVTATCG-ARNIEFVKSLGADEV-LDYKTPDG--A--ALKSP-----------S--GRKYDAVIHCARGIP-- 184 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v-~~~~~~~~--~--~~~~~-----------~--~~~~d~v~d~~g~~~-- 184 (280)
.|+.+|++|++++. +++++.++++|++.+ ++..+... . ..+.+ . .+++|++|+|++.+.
T Consensus 183 ~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~ 262 (509)
T PRK09424 183 AAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKP 262 (509)
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCccc
Confidence 88899999999995 589999999999854 55533210 0 11111 1 157999999999632
Q ss_pred -----cccccccccCCcEEEEeCCCchh--hHHHHHhhhhc-cceeeEEEEEcCCHHHHHHHHHHHHCCCee
Q 048785 185 -----WSTFEPNLAENGKVIDLTPTPSA--MLTFAWQKLTF-SKKQLVPLLVIPKGENLVFLVKLLKEGKIK 248 (280)
Q Consensus 185 -----~~~~~~~l~~~g~~v~~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~ 248 (280)
.+.+++.++++|++++++...+. ..+.....+.. ++.++.+.... ..+.-.++.++++++.+.
T Consensus 263 aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~-P~~~p~~As~lla~~~i~ 333 (509)
T PRK09424 263 APKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL-PSRLPTQSSQLYGTNLVN 333 (509)
T ss_pred CcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC-chhHHHHHHHHHHhCCcc
Confidence 38899999999999999864322 23333344554 78888876633 234444689999998775
No 132
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.80 E-value=0.018 Score=47.86 Aligned_cols=58 Identities=31% Similarity=0.434 Sum_probs=40.9
Q ss_pred CEEEEEecCCcHHHHHhcC-CCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccC
Q 048785 132 SHVTATCGARNIEFVKSLG-ADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAE 194 (280)
Q Consensus 132 ~~Vi~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~ 194 (280)
.++|+++|..+..+.+++| .+.|+.|++.. ......--+++|+.|+.. ...+...++.
T Consensus 163 ~~~vglTS~~N~~Fve~lg~Yd~V~~Yd~i~-----~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d 222 (314)
T PF11017_consen 163 PKVVGLTSARNVAFVESLGCYDEVLTYDDID-----SLDAPQPVVIVDFAGNGEVLAALHEHLGD 222 (314)
T ss_pred ceEEEEecCcchhhhhccCCceEEeehhhhh-----hccCCCCEEEEECCCCHHHHHHHHHHHhh
Confidence 4999999998999999999 57888886644 122244578999999866 3344444433
No 133
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=95.57 E-value=0.024 Score=46.11 Aligned_cols=124 Identities=14% Similarity=0.065 Sum_probs=69.6
Q ss_pred CCCCCCCEEEEeecCCCCCcceeEEeecccccccCCCCCChhhhcccchhHHHHHHHHHhhhh-----------------
Q 048785 63 KNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGLPLAGLTALEALTQSAG----------------- 125 (280)
Q Consensus 63 ~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----------------- 125 (280)
+.+++||+++... +|.++.. +...++++++++.+-.+..-... .....+.....
T Consensus 65 ~p~~~g~~~~i~p------~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~--~~l~~l~~~~~~~~~VLDiGcGsG~l~i 135 (250)
T PRK00517 65 HPIRIGDRLWIVP------SWEDPPD-PDEINIELDPGMAFGTGTHPTTR--LCLEALEKLVLPGKTVLDVGCGSGILAI 135 (250)
T ss_pred CCEEEcCCEEEEC------CCcCCCC-CCeEEEEECCCCccCCCCCHHHH--HHHHHHHhhcCCCCEEEEeCCcHHHHHH
Confidence 4578898887653 4545433 56677888888776655422222 12223322111
Q ss_pred hhhhCCC-EEEEEec-CCcHHHHHhc----CCCeeecCCCCCcccccCCCCCcccEEEECCCCCC----cccccccccCC
Q 048785 126 LAKLGNS-HVTATCG-ARNIEFVKSL----GADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP----WSTFEPNLAEN 195 (280)
Q Consensus 126 la~~~G~-~Vi~~~~-~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~~l~~~ 195 (280)
.+...|+ +|++++. +...+.+++. +....+ ... .....||+|+.+..... ++.+.+.|+++
T Consensus 136 ~~~~~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~-------~~~--~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg 206 (250)
T PRK00517 136 AAAKLGAKKVLAVDIDPQAVEAARENAELNGVELNV-------YLP--QGDLKADVIVANILANPLLELAPDLARLLKPG 206 (250)
T ss_pred HHHHcCCCeEEEEECCHHHHHHHHHHHHHcCCCceE-------EEc--cCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC
Confidence 3344676 6999994 4555555432 221000 000 11115999997665432 56788889999
Q ss_pred cEEEEeCCC
Q 048785 196 GKVIDLTPT 204 (280)
Q Consensus 196 g~~v~~g~~ 204 (280)
|+++..+..
T Consensus 207 G~lilsgi~ 215 (250)
T PRK00517 207 GRLILSGIL 215 (250)
T ss_pred cEEEEEECc
Confidence 999976533
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=95.52 E-value=0.027 Score=46.38 Aligned_cols=143 Identities=13% Similarity=0.036 Sum_probs=71.8
Q ss_pred hhhCCC--EEEEEec-CCcHHHHHh----cCCCeeecCCCCCcccccCCCCCcccEEEECCC-----C--CCcccccccc
Q 048785 127 AKLGNS--HVTATCG-ARNIEFVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVIHCAR-----G--IPWSTFEPNL 192 (280)
Q Consensus 127 a~~~G~--~Vi~~~~-~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l 192 (280)
++..|. +|++++. ++..+.+++ +|.+.+- ....+...+. ...+.||+|+.... + ..++.+.+.|
T Consensus 96 a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~~~l~-~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~L 173 (272)
T PRK11873 96 ARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEIEALP-VADNSVDVIISNCVINLSPDKERVFKEAFRVL 173 (272)
T ss_pred HHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcchhhCC-CCCCceeEEEEcCcccCCCCHHHHHHHHHHHc
Confidence 344453 7999995 466666654 3432221 1001111111 12457999985432 1 2378899999
Q ss_pred cCCcEEEEeCCCchhhH-HHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCC---eeEeccceecchhHHHHHHHH-
Q 048785 193 AENGKVIDLTPTPSAML-TFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGK---IKTLIDSKHLLSKAEDAWAKG- 267 (280)
Q Consensus 193 ~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~---~~~~~~~~~~~~~~~~a~~~~- 267 (280)
+++|+++..+....... ...............+ ... ..++.+++.+.. ++......++++++.++++.+
T Consensus 174 kpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~ 247 (272)
T PRK11873 174 KPGGRFAISDVVLRGELPEEIRNDAELYAGCVAG---ALQ---EEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWG 247 (272)
T ss_pred CCCcEEEEEEeeccCCCCHHHHHhHHHHhccccC---CCC---HHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhc
Confidence 99999987642221110 0011111111000100 112 334455555533 334455678899999999988
Q ss_pred -hcCCCcCcEE
Q 048785 268 -ADGHATGKII 277 (280)
Q Consensus 268 -~~~~~~gkvv 277 (280)
.++...++.+
T Consensus 248 ~~~~~~~~~~~ 258 (272)
T PRK11873 248 IAPGRQLDGYI 258 (272)
T ss_pred cccccccCceE
Confidence 5554444444
No 135
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=93.96 E-value=0.1 Score=46.65 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=54.4
Q ss_pred hhhhCCCEEEEEec-CCcHHHHHhcCCCee-ecCCCCC------cc---------cccCC--CCCcccEEEECC---CCC
Q 048785 126 LAKLGNSHVTATCG-ARNIEFVKSLGADEV-LDYKTPD------GA---------ALKSP--SGRKYDAVIHCA---RGI 183 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v-~~~~~~~------~~---------~~~~~--~~~~~d~v~d~~---g~~ 183 (280)
+++.+|++|++++. +++++.++++|++.+ ++..+.. .. +.... ..+++|++|+|+ |.+
T Consensus 182 ~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~ 261 (511)
T TIGR00561 182 AANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKP 261 (511)
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCC
Confidence 78889999999885 478889999998753 2321100 00 00111 135699999999 543
Q ss_pred C----cccccccccCCcEEEEeCCCc
Q 048785 184 P----WSTFEPNLAENGKVIDLTPTP 205 (280)
Q Consensus 184 ~----~~~~~~~l~~~g~~v~~g~~~ 205 (280)
. .+.+++.+++++.++++....
T Consensus 262 aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 262 APKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred CCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 2 567899999999999986443
No 136
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=89.21 E-value=0.57 Score=38.86 Aligned_cols=131 Identities=15% Similarity=0.134 Sum_probs=70.0
Q ss_pred CCCCCCEEEEeecCCCCCcceeEEeecccccccCCCCCChhhhccc-chhHHHHHHHHHhhhh-----------------
Q 048785 64 NFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEVSAAEGAGL-PLAGLTALEALTQSAG----------------- 125 (280)
Q Consensus 64 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~~-~~~~~~a~~~l~~~~~----------------- 125 (280)
.++.|++.+... +|.++..-....++++.+++.+= ... |... -+..+|.+...
T Consensus 108 P~rig~~f~I~P------sw~~~~~~~~~~~i~lDPGlAFG--TG~HpTT~-lcL~~Le~~~~~g~~vlDvGcGSGILaI 178 (300)
T COG2264 108 PVRIGERFVIVP------SWREYPEPSDELNIELDPGLAFG--TGTHPTTS-LCLEALEKLLKKGKTVLDVGCGSGILAI 178 (300)
T ss_pred cEEeeeeEEECC------CCccCCCCCCceEEEEccccccC--CCCChhHH-HHHHHHHHhhcCCCEEEEecCChhHHHH
Confidence 467888877653 44443222134567777766431 111 2221 22233433322
Q ss_pred hhhhCCC-EEEEEec-CCc----HHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC----cccccccccCC
Q 048785 126 LAKLGNS-HVTATCG-ARN----IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP----WSTFEPNLAEN 195 (280)
Q Consensus 126 la~~~G~-~Vi~~~~-~~~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~~l~~~ 195 (280)
.+..+|+ +|++++- +.. .+.++..+.+... ............++.||+|+-.+=-.. .+.+...++|+
T Consensus 179 Aa~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~--~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg 256 (300)
T COG2264 179 AAAKLGAKKVVGVDIDPQAVEAARENARLNGVELLV--QAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG 256 (300)
T ss_pred HHHHcCCceEEEecCCHHHHHHHHHHHHHcCCchhh--hcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC
Confidence 5557898 7999994 333 3333444443211 111112222233467999997663222 56778889999
Q ss_pred cEEEEeCCCc
Q 048785 196 GKVIDLTPTP 205 (280)
Q Consensus 196 g~~v~~g~~~ 205 (280)
|++++-|...
T Consensus 257 g~lIlSGIl~ 266 (300)
T COG2264 257 GRLILSGILE 266 (300)
T ss_pred ceEEEEeehH
Confidence 9999877443
No 137
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=86.54 E-value=1.7 Score=33.36 Aligned_cols=69 Identities=17% Similarity=0.174 Sum_probs=42.8
Q ss_pred CCEEEEEecC-CcHHHH----HhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC---cccccccccCCcEEEEe
Q 048785 131 NSHVTATCGA-RNIEFV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP---WSTFEPNLAENGKVIDL 201 (280)
Q Consensus 131 G~~Vi~~~~~-~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~l~~~g~~v~~ 201 (280)
..+||++.++ ++.+.. ++||.+.+..-.....+.+... ..+|.+|-.=|... ++.++..|+++||+|.-
T Consensus 58 ~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~--~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 58 SGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDL--PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred CceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCC--CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 4599999975 444433 5788764432222222232211 15899985444322 88999999999999854
No 138
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=86.51 E-value=0.28 Score=40.85 Aligned_cols=74 Identities=15% Similarity=-0.020 Sum_probs=41.8
Q ss_pred hhhhCCC-EEEEEec-CCcHHHH----HhcCCC-eeecCCCCCcccccCCCCCcccEEEECCCCCC----cccccccccC
Q 048785 126 LAKLGNS-HVTATCG-ARNIEFV----KSLGAD-EVLDYKTPDGAALKSPSGRKYDAVIHCARGIP----WSTFEPNLAE 194 (280)
Q Consensus 126 la~~~G~-~Vi~~~~-~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~~l~~ 194 (280)
.|..+|+ +|++++- +...+.+ +..|.. .+.-.. .......+||+|+-..-... ++...+.+++
T Consensus 178 aA~klGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~------~~~~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~ 251 (295)
T PF06325_consen 178 AAAKLGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSL------SEDLVEGKFDLVVANILADVLLELAPDIASLLKP 251 (295)
T ss_dssp HHHHTTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESC------TSCTCCS-EEEEEEES-HHHHHHHHHHCHHHEEE
T ss_pred HHHHcCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEE------ecccccccCCEEEECCCHHHHHHHHHHHHHhhCC
Confidence 6667899 8999994 4333332 333322 121110 01112367999997766543 5567778899
Q ss_pred CcEEEEeCCCc
Q 048785 195 NGKVIDLTPTP 205 (280)
Q Consensus 195 ~g~~v~~g~~~ 205 (280)
+|++++-|...
T Consensus 252 ~G~lIlSGIl~ 262 (295)
T PF06325_consen 252 GGYLILSGILE 262 (295)
T ss_dssp EEEEEEEEEEG
T ss_pred CCEEEEccccH
Confidence 99998766433
No 139
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=84.37 E-value=3.5 Score=32.37 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=46.8
Q ss_pred hhhhCCCEEEEEecCCc-----HHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCc-ccccccccCCcEEE
Q 048785 126 LAKLGNSHVTATCGARN-----IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPW-STFEPNLAENGKVI 199 (280)
Q Consensus 126 la~~~G~~Vi~~~~~~~-----~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~g~~v 199 (280)
|++..| +|+.+.+... .+.++.+|...|....... ...+.....||.|+-+.+-+.+ +..++.|++||+++
T Consensus 90 la~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG--~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv 166 (209)
T COG2518 90 LARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG--SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLV 166 (209)
T ss_pred HHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc--ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEE
Confidence 344444 9999986532 3345677874442221111 1222344679999988887765 57889999999998
Q ss_pred EeC
Q 048785 200 DLT 202 (280)
Q Consensus 200 ~~g 202 (280)
..-
T Consensus 167 ~Pv 169 (209)
T COG2518 167 IPV 169 (209)
T ss_pred EEE
Confidence 764
No 140
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=84.14 E-value=1.3 Score=38.91 Aligned_cols=70 Identities=9% Similarity=-0.064 Sum_probs=48.1
Q ss_pred hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cc-cccccccCCcEEEEeC
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WS-TFEPNLAENGKVIDLT 202 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~g~~v~~g 202 (280)
.++.+|++|++++.+ .+...+...|+. +.+. .+.. .++|++|+|+|+.. +. ..+..+++++.++..|
T Consensus 230 ~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~l----~eal-----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG 299 (425)
T PRK05476 230 RLRGLGARVIVTEVDPICALQAAMDGFR-VMTM----EEAA-----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIG 299 (425)
T ss_pred HHHhCCCEEEEEcCCchhhHHHHhcCCE-ecCH----HHHH-----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcC
Confidence 677889999988854 555555555654 2211 1111 25899999999865 54 5788899999999888
Q ss_pred CCc
Q 048785 203 PTP 205 (280)
Q Consensus 203 ~~~ 205 (280)
..+
T Consensus 300 ~~d 302 (425)
T PRK05476 300 HFD 302 (425)
T ss_pred CCC
Confidence 554
No 141
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=83.51 E-value=2.5 Score=35.19 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=24.8
Q ss_pred CCcccEEEECCCCCC----cccccccccCCcEEEEeCC
Q 048785 170 GRKYDAVIHCARGIP----WSTFEPNLAENGKVIDLTP 203 (280)
Q Consensus 170 ~~~~d~v~d~~g~~~----~~~~~~~l~~~g~~v~~g~ 203 (280)
..+||+|+....... +..+.+.|+++|+++..|.
T Consensus 223 ~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 223 EGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred CCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 357999997654332 5567789999999987664
No 142
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=83.27 E-value=1.5 Score=38.26 Aligned_cols=70 Identities=14% Similarity=-0.011 Sum_probs=48.6
Q ss_pred hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cc-cccccccCCcEEEEeC
Q 048785 126 LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WS-TFEPNLAENGKVIDLT 202 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~g~~v~~g 202 (280)
.++.+|++|+++.. +.+...+...|+. +.+. .+.+ .+.|++|+++|+.. ++ ..+..+++++.++..|
T Consensus 213 ~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~l----eeal-----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G 282 (406)
T TIGR00936 213 RARGMGARVIVTEVDPIRALEAAMDGFR-VMTM----EEAA-----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIG 282 (406)
T ss_pred HHhhCcCEEEEEeCChhhHHHHHhcCCE-eCCH----HHHH-----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEEC
Confidence 77788999999874 4555555666653 3221 1111 24799999999866 54 4788999999999887
Q ss_pred CCc
Q 048785 203 PTP 205 (280)
Q Consensus 203 ~~~ 205 (280)
..+
T Consensus 283 ~~~ 285 (406)
T TIGR00936 283 HFD 285 (406)
T ss_pred CCC
Confidence 544
No 143
>PTZ00414 10 kDa heat shock protein; Provisional
Probab=82.50 E-value=1.7 Score=29.61 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=19.2
Q ss_pred eEEEEEeCCCCC----CCCCCCEEEEe
Q 048785 52 AGEIIEVGSEVK----NFKAGYNVVAI 74 (280)
Q Consensus 52 ~G~V~~vG~~v~----~~~~Gd~V~~~ 74 (280)
-|+|+++|+... .+++||+|+.-
T Consensus 46 ~g~VvAVG~G~~~~~~~Vk~GD~Vl~~ 72 (100)
T PTZ00414 46 EGTVVAVAAATKDWTPTVKVGDTVLLP 72 (100)
T ss_pred eeEEEEECCCCccccceecCCCEEEEc
Confidence 599999999864 38999999853
No 144
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=82.26 E-value=1.3 Score=35.46 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=44.8
Q ss_pred CCCEEEEEe-cCCcHHHHH----hcCCCeeecCCCCCcccccCCCCCcccEEEECC-----CCCC--cccccccccCCcE
Q 048785 130 GNSHVTATC-GARNIEFVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIHCA-----RGIP--WSTFEPNLAENGK 197 (280)
Q Consensus 130 ~G~~Vi~~~-~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~-----g~~~--~~~~~~~l~~~g~ 197 (280)
.|++|.+++ +++..+.++ +-|.. ++|.....+.+.. .++.||+|++.- .++. +..+.++++|+|+
T Consensus 80 ~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~-~~~~FDvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~ 156 (243)
T COG2227 80 LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLAS-AGGQFDVVTCMEVLEHVPDPESFLRACAKLVKPGGI 156 (243)
T ss_pred CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHh-cCCCccEEEEhhHHHccCCHHHHHHHHHHHcCCCcE
Confidence 589999999 555555554 23333 5565555333322 237899998743 2322 6678999999999
Q ss_pred EEEeC
Q 048785 198 VIDLT 202 (280)
Q Consensus 198 ~v~~g 202 (280)
+..--
T Consensus 157 lf~ST 161 (243)
T COG2227 157 LFLST 161 (243)
T ss_pred EEEec
Confidence 87543
No 145
>cd00320 cpn10 Chaperonin 10 Kd subunit (cpn10 or GroES); Cpn10 cooperates with chaperonin 60 (cpn60 or GroEL), an ATPase, to assist the folding and assembly of proteins and is found in eubacterial cytosol, as well as in the matrix of mitochondria and chloroplasts. It forms heptameric rings with a dome-like structure, forming a lid to the large cavity of the tetradecameric cpn60 cylinder and thereby tightly regulating release and binding of proteins to the cpn60 surface.
Probab=82.11 E-value=1.8 Score=29.22 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=19.7
Q ss_pred ceEEEEEeCCCC---------CCCCCCCEEEEe
Q 048785 51 VAGEIIEVGSEV---------KNFKAGYNVVAI 74 (280)
Q Consensus 51 ~~G~V~~vG~~v---------~~~~~Gd~V~~~ 74 (280)
..|+|+++|+.. ..+++||+|+..
T Consensus 35 ~~g~VvAVG~g~~~~~g~~~~~~vk~GD~Vl~~ 67 (93)
T cd00320 35 QEGKVVAVGPGRRNENGERVPLSVKVGDKVLFP 67 (93)
T ss_pred eEEEEEEECCCeECCCCCCccccccCCCEEEEC
Confidence 479999999984 259999999854
No 146
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=81.39 E-value=2.2 Score=35.64 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=49.9
Q ss_pred hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEeCC
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTP 203 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~ 203 (280)
.++.+|++|++.+++ ++.+.++++|...+ ...+. .+. -.++|+||+|+.... -...++.+++++.++++..
T Consensus 170 ~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~~~l-~~~-----l~~aDiVI~t~p~~~i~~~~l~~~~~g~vIIDla~ 242 (296)
T PRK08306 170 TLKALGANVTVGARKSAHLARITEMGLSPF-HLSEL-AEE-----VGKIDIIFNTIPALVLTKEVLSKMPPEALIIDLAS 242 (296)
T ss_pred HHHHCCCEEEEEECCHHHHHHHHHcCCeee-cHHHH-HHH-----hCCCCEEEECCChhhhhHHHHHcCCCCcEEEEEcc
Confidence 666789999988865 66777778886532 21110 111 124899999987543 3456677899999998876
Q ss_pred Cchh
Q 048785 204 TPSA 207 (280)
Q Consensus 204 ~~~~ 207 (280)
.++.
T Consensus 243 ~pgg 246 (296)
T PRK08306 243 KPGG 246 (296)
T ss_pred CCCC
Confidence 6543
No 147
>PRK00364 groES co-chaperonin GroES; Reviewed
Probab=80.41 E-value=1.9 Score=29.25 Aligned_cols=24 Identities=29% Similarity=0.470 Sum_probs=19.3
Q ss_pred ceEEEEEeCCCCC---------CCCCCCEEEEe
Q 048785 51 VAGEIIEVGSEVK---------NFKAGYNVVAI 74 (280)
Q Consensus 51 ~~G~V~~vG~~v~---------~~~~Gd~V~~~ 74 (280)
..|+|+++|+... .+++||+|+..
T Consensus 36 ~~G~VvaVG~G~~~~~G~~~~~~vk~GD~Vlf~ 68 (95)
T PRK00364 36 QEGEVVAVGPGRRLDNGERVPLDVKVGDKVLFG 68 (95)
T ss_pred ceEEEEEECCCeECCCCCEeecccCCCCEEEEc
Confidence 3799999999642 48999999853
No 148
>PLN02494 adenosylhomocysteinase
Probab=78.77 E-value=3.8 Score=36.47 Aligned_cols=69 Identities=12% Similarity=-0.005 Sum_probs=48.4
Q ss_pred hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC--cccccccccCCcEEEEeC
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP--WSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~l~~~g~~v~~g 202 (280)
.++.+|++|+++..+ .+...+...|+.. ++. .+.+ ...|++++|+|+.. ....+..|++++.++.+|
T Consensus 272 ~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v~l----eEal-----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvG 341 (477)
T PLN02494 272 AMKAAGARVIVTEIDPICALQALMEGYQV-LTL----EDVV-----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIG 341 (477)
T ss_pred HHHHCCCEEEEEeCCchhhHHHHhcCCee-ccH----HHHH-----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcC
Confidence 667889998888754 4555565666542 211 1111 24799999999875 368899999999999998
Q ss_pred CC
Q 048785 203 PT 204 (280)
Q Consensus 203 ~~ 204 (280)
..
T Consensus 342 r~ 343 (477)
T PLN02494 342 HF 343 (477)
T ss_pred CC
Confidence 53
No 149
>KOG4300 consensus Predicted methyltransferase [General function prediction only]
Probab=78.66 E-value=3.5 Score=32.29 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=47.8
Q ss_pred CCEEEEEecCCcHHHHH--hcCC------CeeecCCCCCcccccCCCCCcccEEEECCC-----C--CCcccccccccCC
Q 048785 131 NSHVTATCGARNIEFVK--SLGA------DEVLDYKTPDGAALKSPSGRKYDAVIHCAR-----G--IPWSTFEPNLAEN 195 (280)
Q Consensus 131 G~~Vi~~~~~~~~~~~~--~~g~------~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~ 195 (280)
+.+|..++++++++... ++.. .+.+... .+.+..+....+|.|+.+.+ . ..++..-++|+|+
T Consensus 99 ~~svt~lDpn~~mee~~~ks~~E~k~~~~~~fvva~---ge~l~~l~d~s~DtVV~TlvLCSve~~~k~L~e~~rlLRpg 175 (252)
T KOG4300|consen 99 INSVTCLDPNEKMEEIADKSAAEKKPLQVERFVVAD---GENLPQLADGSYDTVVCTLVLCSVEDPVKQLNEVRRLLRPG 175 (252)
T ss_pred CceEEEeCCcHHHHHHHHHHHhhccCcceEEEEeec---hhcCcccccCCeeeEEEEEEEeccCCHHHHHHHHHHhcCCC
Confidence 45788888776654331 1111 1111111 12333346677998888555 2 2277888999999
Q ss_pred cEEEEeCCCch--hhHHHHHhhhhcc
Q 048785 196 GKVIDLTPTPS--AMLTFAWQKLTFS 219 (280)
Q Consensus 196 g~~v~~g~~~~--~~~~~~~~~~~~~ 219 (280)
|+++.+....+ ......+++..-.
T Consensus 176 G~iifiEHva~~y~~~n~i~q~v~ep 201 (252)
T KOG4300|consen 176 GRIIFIEHVAGEYGFWNRILQQVAEP 201 (252)
T ss_pred cEEEEEecccccchHHHHHHHHHhch
Confidence 99998863332 2333444444433
No 150
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=77.42 E-value=1.1 Score=29.53 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=39.1
Q ss_pred hhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-------cccccccccCCcEE
Q 048785 127 AKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-------WSTFEPNLAENGKV 198 (280)
Q Consensus 127 a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-------~~~~~~~l~~~g~~ 198 (280)
++.-+.+|++++-+ +..+.+++.....-+.....+...+ ....+.||+|+....-.. +..+.+.|+++|++
T Consensus 15 ~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l-~~~~~sfD~v~~~~~~~~~~~~~~~l~e~~rvLk~gG~l 93 (95)
T PF08241_consen 15 AKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDL-PFPDNSFDVVFSNSVLHHLEDPEAALREIYRVLKPGGRL 93 (95)
T ss_dssp HHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSS-SS-TT-EEEEEEESHGGGSSHHHHHHHHHHHHEEEEEEE
T ss_pred HhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhC-ccccccccccccccceeeccCHHHHHHHHHHHcCcCeEE
Confidence 33336799999954 5566665543221111111111111 223557999987554222 67888899999988
Q ss_pred E
Q 048785 199 I 199 (280)
Q Consensus 199 v 199 (280)
+
T Consensus 94 ~ 94 (95)
T PF08241_consen 94 V 94 (95)
T ss_dssp E
T ss_pred e
Confidence 6
No 151
>PRK14533 groES co-chaperonin GroES; Provisional
Probab=77.08 E-value=3.4 Score=27.74 Aligned_cols=23 Identities=26% Similarity=0.411 Sum_probs=18.6
Q ss_pred eEEEEEeCCCCC----CCCCCCEEEEe
Q 048785 52 AGEIIEVGSEVK----NFKAGYNVVAI 74 (280)
Q Consensus 52 ~G~V~~vG~~v~----~~~~Gd~V~~~ 74 (280)
.|+|+++|+... .+++||+|+..
T Consensus 37 ~G~VvavG~g~~~~~~~Vk~GD~Vl~~ 63 (91)
T PRK14533 37 KAEVVAVGKLDDEEDFDIKVGDKVIFS 63 (91)
T ss_pred eEEEEEECCCCccccccccCCCEEEEc
Confidence 699999997543 48999999853
No 152
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=76.41 E-value=1.8 Score=29.90 Aligned_cols=69 Identities=13% Similarity=0.131 Sum_probs=39.8
Q ss_pred hCCCEEEEEec-CCcHHHHHh----cCC-Cee-ecCCCCCcccccCCCCCcccEEEECC-CCC-C---------cccccc
Q 048785 129 LGNSHVTATCG-ARNIEFVKS----LGA-DEV-LDYKTPDGAALKSPSGRKYDAVIHCA-RGI-P---------WSTFEP 190 (280)
Q Consensus 129 ~~G~~Vi~~~~-~~~~~~~~~----~g~-~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~-g~~-~---------~~~~~~ 190 (280)
..+++|++++- ++..+.+++ .+. +++ +...+. ........+||+|+... ... . ++.+.+
T Consensus 23 ~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~---~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~ 99 (112)
T PF12847_consen 23 FPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA---EFDPDFLEPFDLVICSGFTLHFLLPLDERRRVLERIRR 99 (112)
T ss_dssp HTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC---HGGTTTSSCEEEEEECSGSGGGCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc---ccCcccCCCCCEEEECCCccccccchhHHHHHHHHHHH
Confidence 46889999994 455555532 221 111 111111 12223344699999877 221 1 567888
Q ss_pred cccCCcEEEE
Q 048785 191 NLAENGKVID 200 (280)
Q Consensus 191 ~l~~~g~~v~ 200 (280)
.|+|+|+++.
T Consensus 100 ~L~pgG~lvi 109 (112)
T PF12847_consen 100 LLKPGGRLVI 109 (112)
T ss_dssp HEEEEEEEEE
T ss_pred hcCCCcEEEE
Confidence 9999999874
No 153
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=76.27 E-value=4.7 Score=35.08 Aligned_cols=72 Identities=11% Similarity=0.091 Sum_probs=42.2
Q ss_pred hhhhCCCEEEEEe-cCCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEEC-----CCCC----CcccccccccCC
Q 048785 126 LAKLGNSHVTATC-GARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHC-----ARGI----PWSTFEPNLAEN 195 (280)
Q Consensus 126 la~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~-----~g~~----~~~~~~~~l~~~ 195 (280)
+++..|++|++++ +++..+.+++.....-+.....+... . .+.||.|+.. +|.. .++.+.+.|+|+
T Consensus 185 la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~---l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG 260 (383)
T PRK11705 185 AAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRD---L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD 260 (383)
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhh---c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 6667789999999 45667777654321111110011111 1 3468988643 3332 267788899999
Q ss_pred cEEEEe
Q 048785 196 GKVIDL 201 (280)
Q Consensus 196 g~~v~~ 201 (280)
|+++..
T Consensus 261 G~lvl~ 266 (383)
T PRK11705 261 GLFLLH 266 (383)
T ss_pred cEEEEE
Confidence 998764
No 154
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=76.02 E-value=34 Score=29.07 Aligned_cols=44 Identities=18% Similarity=0.141 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHCCCeeEeccceecchhHHHHHHHHhcCCCcCcEEEe
Q 048785 233 ENLVFLVKLLKEGKIKTLIDSKHLLSKAEDAWAKGADGHATGKIILE 279 (280)
Q Consensus 233 ~~~~~~~~~i~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 279 (280)
+.+..+.+++.+.-+-.=++ .=.++-.|++..++.++.+|+++.
T Consensus 292 ~A~~~Ar~La~eeGll~G~S---SGan~~aAl~~a~~~en~~kliV~ 335 (362)
T KOG1252|consen 292 EAIEMARRLALEEGLLVGIS---SGANVAAALKLAKRPENAGKLIVV 335 (362)
T ss_pred HHHHHHHHHHHhhCeeeccc---chHHHHHHHHHHhccccCCcEEEE
Confidence 34455555555444432222 123566777777777778888764
No 155
>PF00166 Cpn10: Chaperonin 10 Kd subunit; InterPro: IPR020818 The chaperonins are `helper' molecules required for correct folding and subsequent assembly of some proteins []. These are required for normal cell growth [], and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions. Type I chaperonins present in eubacteria, mitochondria and chloroplasts require the concerted action of 2 proteins, chaperonin 60 (cpn60) and chaperonin 10 (cpn10) []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between six to eight identical subunits, while the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The central cavity of the cylindrical cpn60 tetradecamer provides as isolated environment for protein folding whilst cpn-10 binds to cpn-60 and synchronizes the release of the folded protein in an Mg2+-ATP dependent manner []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. Escherichia coli GroES has also been shown to bind ATP cooperatively, and with an affinity comparable to that of GroEL []. Each GroEL subunit contains three structurally distinct domains: an apical, an intermediate and an equatorial domain. The apical domain contains the binding sites for both GroES and the unfolded protein substrate. The equatorial domain contains the ATP-binding site and most of the oligomeric contacts. The intermediate domain links the apical and equatorial domains and transfers allosteric information between them. The GroEL oligomer is a tetradecamer, cylindrically shaped, that is organised in two heptameric rings stacked back to back. Each GroEL ring contains a central cavity, known as the `Anfinsen cage', that provides an isolated environment for protein folding. The identical 10 kDa subunits of GroES form a dome-like heptameric oligomer in solution. ATP binding to GroES may be important in charging the seven subunits of the interacting GroEL ring with ATP, to facilitate cooperative ATP binding and hydrolysis for substrate protein release.; GO: 0006457 protein folding, 0005737 cytoplasm; PDB: 1PF9_Q 1AON_P 1SX4_T 1SVT_R 2C7D_P 1PCQ_O 2C7C_Q 1GRU_Q 1WNR_F 1P3H_I ....
Probab=75.63 E-value=2.3 Score=28.67 Aligned_cols=24 Identities=33% Similarity=0.530 Sum_probs=17.6
Q ss_pred ceEEEEEeCC--------CC-CCCCCCCEEEEe
Q 048785 51 VAGEIIEVGS--------EV-KNFKAGYNVVAI 74 (280)
Q Consensus 51 ~~G~V~~vG~--------~v-~~~~~Gd~V~~~ 74 (280)
..|+|+++|+ .+ ..+++||+|..-
T Consensus 35 ~~G~VvaVG~G~~~~~g~~~~~~vk~GD~Vl~~ 67 (93)
T PF00166_consen 35 NQGKVVAVGPGRYNENGEEVPMDVKVGDKVLFP 67 (93)
T ss_dssp EEEEEEEE-SEEETTTSSEEETSS-TTSEEEEE
T ss_pred ceeEEEEcCCccccCCCcEeeeeeeeccEEecc
Confidence 5899999999 33 259999999865
No 156
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=73.89 E-value=6.1 Score=30.73 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=38.3
Q ss_pred CEEEEEecC-CcHHHH----HhcC-CCeeecCCCCCcccccCCCCCcccEEEECCCCCC----cccccccccCCcEEEE
Q 048785 132 SHVTATCGA-RNIEFV----KSLG-ADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP----WSTFEPNLAENGKVID 200 (280)
Q Consensus 132 ~~Vi~~~~~-~~~~~~----~~~g-~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~~l~~~g~~v~ 200 (280)
.+|++++.+ +..+.+ +.+| .+.+........+.+.. ....+|.||...+... +..+.+.|+++|+++.
T Consensus 66 ~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~-~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 66 GKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFT-INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhh-cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 589999954 554444 3455 33222111111111111 1246999998655322 6677888999999875
No 157
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=70.90 E-value=8.2 Score=33.43 Aligned_cols=77 Identities=10% Similarity=0.091 Sum_probs=44.9
Q ss_pred hhhhCCCEEEEEecC-CcHHHHH-hcCCCeeecCCCCCcccccCCCCCcccEEEECCC---C--CC--cccccccccCCc
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVK-SLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAR---G--IP--WSTFEPNLAENG 196 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g---~--~~--~~~~~~~l~~~g 196 (280)
.++.+|++|++++++ ++.+.+. .++........+.. ...+.. ..+|++|+|++ . +. -..+++.+++++
T Consensus 185 ~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~-~l~~~l--~~aDvVI~a~~~~g~~~p~lit~~~l~~mk~g~ 261 (370)
T TIGR00518 185 MANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAY-EIEDAV--KRADLLIGAVLIPGAKAPKLVSNSLVAQMKPGA 261 (370)
T ss_pred HHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHH-HHHHHH--ccCCEEEEccccCCCCCCcCcCHHHHhcCCCCC
Confidence 667789988888854 5555553 44443111111111 111111 35899999983 2 21 356777889999
Q ss_pred EEEEeCCCc
Q 048785 197 KVIDLTPTP 205 (280)
Q Consensus 197 ~~v~~g~~~ 205 (280)
.+++++...
T Consensus 262 vIvDva~d~ 270 (370)
T TIGR00518 262 VIVDVAIDQ 270 (370)
T ss_pred EEEEEecCC
Confidence 999887444
No 158
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=70.30 E-value=23 Score=31.75 Aligned_cols=70 Identities=10% Similarity=-0.056 Sum_probs=46.1
Q ss_pred hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cc-cccccccCCcEEEEeC
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WS-TFEPNLAENGKVIDLT 202 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~g~~v~~g 202 (280)
.++.+|++|+++.++ .+...+...|+..+ +. .+.+ +..|+++.|+|+.. +. ..+..|++++.++.+|
T Consensus 272 rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~-~l----eell-----~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvG 341 (476)
T PTZ00075 272 ALRGFGARVVVTEIDPICALQAAMEGYQVV-TL----EDVV-----ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIG 341 (476)
T ss_pred HHHHCCCEEEEEeCCchhHHHHHhcCceec-cH----HHHH-----hcCCEEEECCCcccccCHHHHhccCCCcEEEEcC
Confidence 666788988887754 44333444454321 11 1111 24899999998765 44 7889999999999988
Q ss_pred CCc
Q 048785 203 PTP 205 (280)
Q Consensus 203 ~~~ 205 (280)
-.+
T Consensus 342 r~d 344 (476)
T PTZ00075 342 HFD 344 (476)
T ss_pred CCc
Confidence 554
No 159
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=69.61 E-value=11 Score=29.15 Aligned_cols=70 Identities=21% Similarity=0.250 Sum_probs=40.4
Q ss_pred CCCEEEEEecC-CcHHHH----HhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC---CcccccccccCCcEEEEe
Q 048785 130 GNSHVTATCGA-RNIEFV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI---PWSTFEPNLAENGKVIDL 201 (280)
Q Consensus 130 ~G~~Vi~~~~~-~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~g~~v~~ 201 (280)
.+++|++++.+ +..+.+ ++.+.+.+ .....+..... ..+.||+|+-..... .+..+.+.|+++|+++.+
T Consensus 68 ~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d~~~~~--~~~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 68 PELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGRAEEFG--QEEKFDVVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred CCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEeccHhhCC--CCCCccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 35799999964 444444 34554321 11111111111 145799999754332 266788999999999876
Q ss_pred C
Q 048785 202 T 202 (280)
Q Consensus 202 g 202 (280)
-
T Consensus 145 ~ 145 (187)
T PRK00107 145 K 145 (187)
T ss_pred e
Confidence 4
No 160
>COG0234 GroS Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones]
Probab=66.64 E-value=7 Score=26.31 Aligned_cols=23 Identities=30% Similarity=0.505 Sum_probs=17.6
Q ss_pred eEEEEEeCCCCC---------CCCCCCEEEEe
Q 048785 52 AGEIIEVGSEVK---------NFKAGYNVVAI 74 (280)
Q Consensus 52 ~G~V~~vG~~v~---------~~~~Gd~V~~~ 74 (280)
-|+|+++|+.-. .+++||+|+.-
T Consensus 37 ~g~VvAVG~G~~~~~g~~~~~~VkvGD~Vlf~ 68 (96)
T COG0234 37 EGEVVAVGPGRRDENGELVPLDVKVGDRVLFG 68 (96)
T ss_pred ceEEEEEccceecCCCCEeccccccCCEEEEC
Confidence 599999997321 38999999853
No 161
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=63.57 E-value=37 Score=27.40 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=45.6
Q ss_pred hhhhCC-CEEEEEe-cCCcHHHH----HhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC-------Ccccccccc
Q 048785 126 LAKLGN-SHVTATC-GARNIEFV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI-------PWSTFEPNL 192 (280)
Q Consensus 126 la~~~G-~~Vi~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-------~~~~~~~~l 192 (280)
+++..| ++|++++ ++.-++.+ .+.|... +..-..+.+.+- ..++.||++..+.|=. .+..+.+.|
T Consensus 69 ~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP-f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVl 146 (238)
T COG2226 69 LAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP-FPDNSFDAVTISFGLRNVTDIDKALKEMYRVL 146 (238)
T ss_pred HHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC-CCCCccCEEEeeehhhcCCCHHHHHHHHHHhh
Confidence 455555 4999999 44434444 3344332 211111112222 3456799999888832 277889999
Q ss_pred cCCcEEEEeCCC
Q 048785 193 AENGKVIDLTPT 204 (280)
Q Consensus 193 ~~~g~~v~~g~~ 204 (280)
+|+|+++.+...
T Consensus 147 KpgG~~~vle~~ 158 (238)
T COG2226 147 KPGGRLLVLEFS 158 (238)
T ss_pred cCCeEEEEEEcC
Confidence 999999887633
No 162
>PLN02244 tocopherol O-methyltransferase
Probab=60.93 E-value=9.2 Score=32.69 Aligned_cols=72 Identities=14% Similarity=0.069 Sum_probs=41.3
Q ss_pred hhhhCCCEEEEEec-CCcHHHHH----hcCCC---eeecCCCCCcccccCCCCCcccEEEECCCCC-------Ccccccc
Q 048785 126 LAKLGNSHVTATCG-ARNIEFVK----SLGAD---EVLDYKTPDGAALKSPSGRKYDAVIHCARGI-------PWSTFEP 190 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-------~~~~~~~ 190 (280)
+++..|++|++++- +...+.++ ..|.. ..+..+.. .+ ....+.||+|+...... .+..+.+
T Consensus 136 La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~---~~-~~~~~~FD~V~s~~~~~h~~d~~~~l~e~~r 211 (340)
T PLN02244 136 LARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADAL---NQ-PFEDGQFDLVWSMESGEHMPDKRKFVQELAR 211 (340)
T ss_pred HHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcc---cC-CCCCCCccEEEECCchhccCCHHHHHHHHHH
Confidence 56666899999994 44444333 33321 11111111 11 11345699998754422 2567889
Q ss_pred cccCCcEEEEe
Q 048785 191 NLAENGKVIDL 201 (280)
Q Consensus 191 ~l~~~g~~v~~ 201 (280)
.|++||+++..
T Consensus 212 vLkpGG~lvi~ 222 (340)
T PLN02244 212 VAAPGGRIIIV 222 (340)
T ss_pred HcCCCcEEEEE
Confidence 99999998865
No 163
>KOG1641 consensus Mitochondrial chaperonin [Posttranslational modification, protein turnover, chaperones]
Probab=60.47 E-value=17 Score=24.71 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=20.0
Q ss_pred ccceEEEEEeCCCCC---------CCCCCCEEEEe
Q 048785 49 TDVAGEIIEVGSEVK---------NFKAGYNVVAI 74 (280)
Q Consensus 49 ~e~~G~V~~vG~~v~---------~~~~Gd~V~~~ 74 (280)
-...|+|+++|+... ..++||+|...
T Consensus 42 K~~~g~VvavGpG~~~~~G~~v~~~Vk~Gd~VLlp 76 (104)
T KOG1641|consen 42 KLLQGTVVAVGPGSRDKGGEIVPVSVKVGDRVLLP 76 (104)
T ss_pred ccceEEEEEEcCccccCCCCCcCccccCCCEEEee
Confidence 334699999998864 37899999865
No 164
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=60.02 E-value=25 Score=24.37 Aligned_cols=31 Identities=16% Similarity=0.106 Sum_probs=23.4
Q ss_pred CcccEEEECCCCCC----cccccccccCCcEEEEe
Q 048785 171 RKYDAVIHCARGIP----WSTFEPNLAENGKVIDL 201 (280)
Q Consensus 171 ~~~d~v~d~~g~~~----~~~~~~~l~~~g~~v~~ 201 (280)
..+|.|+...+... ++.+.+.|+++|+++..
T Consensus 87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 87 PEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 47999997654322 77889999999998864
No 165
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=59.29 E-value=11 Score=29.73 Aligned_cols=32 Identities=19% Similarity=0.012 Sum_probs=23.6
Q ss_pred CcccEEEECCCC---------CCcccccccccCCcEEEEeC
Q 048785 171 RKYDAVIHCARG---------IPWSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 171 ~~~d~v~d~~g~---------~~~~~~~~~l~~~g~~v~~g 202 (280)
..||.++|+..- ..+..+.++|+|+|+++...
T Consensus 112 ~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~ 152 (213)
T TIGR03840 112 GPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLIT 152 (213)
T ss_pred CCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 469999997641 12678899999999866553
No 166
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=58.83 E-value=8.4 Score=29.96 Aligned_cols=69 Identities=14% Similarity=0.062 Sum_probs=36.7
Q ss_pred CCCEEEEEec-CCcHHHHH----hcCCCeeecCCCCCcccccCCCCCcccEEEECCC----C-----CCcccccccccCC
Q 048785 130 GNSHVTATCG-ARNIEFVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAR----G-----IPWSTFEPNLAEN 195 (280)
Q Consensus 130 ~G~~Vi~~~~-~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g----~-----~~~~~~~~~l~~~ 195 (280)
.|.+|++++. ++-.+.++ ..+...+ .....+.... ...+.||+|+.+.. . ..+..+.+.|+++
T Consensus 51 ~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~--~~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg 127 (197)
T PRK11207 51 NGFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNL--TFDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG 127 (197)
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhC--CcCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC
Confidence 3789999994 44444433 2232211 1111111111 11346999997644 1 1166788899999
Q ss_pred cEEEEe
Q 048785 196 GKVIDL 201 (280)
Q Consensus 196 g~~v~~ 201 (280)
|.++.+
T Consensus 128 G~~~~~ 133 (197)
T PRK11207 128 GYNLIV 133 (197)
T ss_pred cEEEEE
Confidence 996543
No 167
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=54.51 E-value=14 Score=29.26 Aligned_cols=29 Identities=14% Similarity=0.112 Sum_probs=22.2
Q ss_pred CcccEEEECCCC----CC-----cccccccccCCcEEE
Q 048785 171 RKYDAVIHCARG----IP-----WSTFEPNLAENGKVI 199 (280)
Q Consensus 171 ~~~d~v~d~~g~----~~-----~~~~~~~l~~~g~~v 199 (280)
+.||+|+|++.= +. ...+.++|+++|++.
T Consensus 115 g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~~l 152 (218)
T PF05724_consen 115 GKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGRGL 152 (218)
T ss_dssp HSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEEEE
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 369999998773 11 667888999999943
No 168
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=54.39 E-value=1.1e+02 Score=24.52 Aligned_cols=69 Identities=17% Similarity=0.042 Sum_probs=40.9
Q ss_pred CCCEEEEEec-CCcHHHHHhcCC-CeeecCCCCCcccccCCCCCcccEEEECCCC-------CCcccccccccCCcEEEE
Q 048785 130 GNSHVTATCG-ARNIEFVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVIHCARG-------IPWSTFEPNLAENGKVID 200 (280)
Q Consensus 130 ~G~~Vi~~~~-~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~g~~v~ 200 (280)
.|.+|++++- ++..+.+++... ...+..+... + ......||+|+....- ..+..+.+.|+++|.++.
T Consensus 63 ~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~---~-~~~~~~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~ 138 (251)
T PRK10258 63 RGSQVTALDLSPPMLAQARQKDAADHYLAGDIES---L-PLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAF 138 (251)
T ss_pred cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCccc---C-cCCCCcEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 4789999995 456666655432 2222211111 1 1234469999875431 126678889999999886
Q ss_pred eC
Q 048785 201 LT 202 (280)
Q Consensus 201 ~g 202 (280)
..
T Consensus 139 ~~ 140 (251)
T PRK10258 139 TT 140 (251)
T ss_pred Ee
Confidence 54
No 169
>PRK11579 putative oxidoreductase; Provisional
Probab=53.01 E-value=1.4e+02 Score=25.37 Aligned_cols=115 Identities=11% Similarity=0.057 Sum_probs=60.2
Q ss_pred hhhhCCCEEEEEecCCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEeCCC
Q 048785 126 LAKLGNSHVTATCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTPT 204 (280)
Q Consensus 126 la~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~ 204 (280)
+.+.-+++++++++........+++...++ .+. .+. .....+|+|+.|+.+.. .+.+..++..|-+++ +.-+
T Consensus 24 ~~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~~-~el---l~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl-~EKP 96 (346)
T PRK11579 24 IAGTPGLELAAVSSSDATKVKADWPTVTVV--SEP-QHL---FNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVV-VDKP 96 (346)
T ss_pred HhhCCCCEEEEEECCCHHHHHhhCCCCcee--CCH-HHH---hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEE-EeCC
Confidence 334457899988864322222334322222 111 122 22346999999998744 778888887766654 5422
Q ss_pred ch---hhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCe
Q 048785 205 PS---AMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKI 247 (280)
Q Consensus 205 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~ 247 (280)
-. ....-........+..+...+.......++.+-++|++|.+
T Consensus 97 la~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 97 FTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVL 142 (346)
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCC
Confidence 11 11111112222234443333323345667888889999876
No 170
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=52.98 E-value=30 Score=26.37 Aligned_cols=97 Identities=15% Similarity=0.074 Sum_probs=52.4
Q ss_pred hhhhCCCEEEEEecCCcHHH-HHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-----cc-cccccccCCcEE
Q 048785 126 LAKLGNSHVTATCGARNIEF-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-----WS-TFEPNLAENGKV 198 (280)
Q Consensus 126 la~~~G~~Vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-----~~-~~~~~l~~~g~~ 198 (280)
+++.+|++|++.++..+... ....+.. +.+. .+.+ ...|+|+.+..... ++ ..+..|+++..+
T Consensus 54 ~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~~l-~ell-----~~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~l 123 (178)
T PF02826_consen 54 RLKAFGMRVIGYDRSPKPEEGADEFGVE----YVSL-DELL-----AQADIVSLHLPLTPETRGLINAEFLAKMKPGAVL 123 (178)
T ss_dssp HHHHTT-EEEEEESSCHHHHHHHHTTEE----ESSH-HHHH-----HH-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEE
T ss_pred eeecCCceeEEecccCChhhhcccccce----eeeh-hhhc-----chhhhhhhhhccccccceeeeeeeeeccccceEE
Confidence 77789999999997644333 4444431 1111 1111 12688888776322 22 456677777777
Q ss_pred EEeCCCchhhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCeeEeccceecch
Q 048785 199 IDLTPTPSAMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIKTLIDSKHLLS 258 (280)
Q Consensus 199 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~ 258 (280)
|-++ ++..-+.+.+++.+++|++.--.-++|.-|
T Consensus 124 vN~a--------------------------RG~~vde~aL~~aL~~g~i~ga~lDV~~~E 157 (178)
T PF02826_consen 124 VNVA--------------------------RGELVDEDALLDALESGKIAGAALDVFEPE 157 (178)
T ss_dssp EESS--------------------------SGGGB-HHHHHHHHHTTSEEEEEESS-SSS
T ss_pred Eecc--------------------------chhhhhhhHHHHHHhhccCceEEEECCCCC
Confidence 6554 222334567788889999875444344433
No 171
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=51.83 E-value=56 Score=25.67 Aligned_cols=72 Identities=19% Similarity=0.147 Sum_probs=40.0
Q ss_pred hhhhCC--CEEEEEecC-CcHHHH----HhcCCCe--eecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCC
Q 048785 126 LAKLGN--SHVTATCGA-RNIEFV----KSLGADE--VLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAEN 195 (280)
Q Consensus 126 la~~~G--~~Vi~~~~~-~~~~~~----~~~g~~~--v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~ 195 (280)
+++..+ .+|++++.+ +-.+.+ ++.|..+ ++..+... .......||.|+-...... .....+.|+++
T Consensus 94 la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~----~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg 169 (212)
T PRK13942 94 VAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL----GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG 169 (212)
T ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc----CCCcCCCcCEEEECCCcccchHHHHHhhCCC
Confidence 344444 589999954 433333 3445332 22222111 1123457999876544333 45778899999
Q ss_pred cEEEEe
Q 048785 196 GKVIDL 201 (280)
Q Consensus 196 g~~v~~ 201 (280)
|+++..
T Consensus 170 G~lvi~ 175 (212)
T PRK13942 170 GIMVIP 175 (212)
T ss_pred cEEEEE
Confidence 998765
No 172
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=51.11 E-value=13 Score=31.28 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=48.1
Q ss_pred cccccCCCCCChhhhccc-chhHHHHHHHHHhhh-------h-----------------hhhhCCC-EEEEEecC-Cc-H
Q 048785 92 SLTASRPLEVSAAEGAGL-PLAGLTALEALTQSA-------G-----------------LAKLGNS-HVTATCGA-RN-I 143 (280)
Q Consensus 92 ~~~~~~p~~~~~~~aa~~-~~~~~~a~~~l~~~~-------~-----------------la~~~G~-~Vi~~~~~-~~-~ 143 (280)
..++++|+.+..+.++.. +.+ .++.++.... + .++..|+ +|+.+.++ ++ .
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~s--v~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVS--ISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcC--HHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 456788888887777665 333 4444442211 1 2233465 67667665 44 4
Q ss_pred HHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCc
Q 048785 144 EFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPW 185 (280)
Q Consensus 144 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 185 (280)
++++++|.. +++.++. .+.+ ..+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~~~~-~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLDEL-LELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHHHH-HHHH-----hcCCEEEECCCCCch
Confidence 677788874 3332111 1111 237999999998764
No 173
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=50.80 E-value=9.4 Score=31.52 Aligned_cols=69 Identities=16% Similarity=0.248 Sum_probs=36.3
Q ss_pred hhhhCCCEEEEEe-cCCcHHHH----HhcCCC-ee-ecCCCCCcccccCCCCCcccEEEE-----CCCCCC----ccccc
Q 048785 126 LAKLGNSHVTATC-GARNIEFV----KSLGAD-EV-LDYKTPDGAALKSPSGRKYDAVIH-----CARGIP----WSTFE 189 (280)
Q Consensus 126 la~~~G~~Vi~~~-~~~~~~~~----~~~g~~-~v-~~~~~~~~~~~~~~~~~~~d~v~d-----~~g~~~----~~~~~ 189 (280)
+++.+|++|.+++ |++..+.+ ++.|.. .+ +...+ ... . ..+||.|+- .+|... +..+.
T Consensus 80 ~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~~~---~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~ 153 (273)
T PF02353_consen 80 AAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--YRD---L-PGKFDRIVSIEMFEHVGRKNYPAFFRKIS 153 (273)
T ss_dssp HHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---GGG-------S-SEEEEESEGGGTCGGGHHHHHHHHH
T ss_pred HHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--ccc---c-CCCCCEEEEEechhhcChhHHHHHHHHHH
Confidence 6777799999999 44555555 345532 11 11111 111 1 126887664 333222 77888
Q ss_pred ccccCCcEEEE
Q 048785 190 PNLAENGKVID 200 (280)
Q Consensus 190 ~~l~~~g~~v~ 200 (280)
+.|+|+|+++.
T Consensus 154 ~~LkpgG~~~l 164 (273)
T PF02353_consen 154 RLLKPGGRLVL 164 (273)
T ss_dssp HHSETTEEEEE
T ss_pred HhcCCCcEEEE
Confidence 99999999863
No 174
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=50.49 E-value=18 Score=33.35 Aligned_cols=56 Identities=20% Similarity=0.173 Sum_probs=31.1
Q ss_pred cHHHHHhcCCCeeecCCC-CCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEE
Q 048785 142 NIEFVKSLGADEVLDYKT-PDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVI 199 (280)
Q Consensus 142 ~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v 199 (280)
+.+.++++|++..++... .+.. ... ...++|.+|+++|... ....+......|.+.
T Consensus 193 ~l~~~~~~Gv~~~~~~~~~~~~~-~~~-~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~ 250 (564)
T PRK12771 193 EIQRILDLGVEVRLGVRVGEDIT-LEQ-LEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLD 250 (564)
T ss_pred HHHHHHHCCCEEEeCCEECCcCC-HHH-HHhhCCEEEEeeCCCCCCcCCCCCCccCCcEE
Confidence 345667889876665432 1110 111 1235999999999754 334444445555544
No 175
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=49.85 E-value=42 Score=27.52 Aligned_cols=70 Identities=16% Similarity=0.119 Sum_probs=41.8
Q ss_pred CEEEEEec-CCcHHHHHhcCCC-eeecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEeCCCc
Q 048785 132 SHVTATCG-ARNIEFVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDLTPTP 205 (280)
Q Consensus 132 ~~Vi~~~~-~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~ 205 (280)
+.+++++- ++-.+.+.+.... ..+..+.. .+ -.....||+|+..........+.+.|+++|+++.+.+.+
T Consensus 113 ~~v~giD~s~~~l~~A~~~~~~~~~~~~d~~---~l-p~~~~sfD~I~~~~~~~~~~e~~rvLkpgG~li~~~p~~ 184 (272)
T PRK11088 113 MQLFGLDISKVAIKYAAKRYPQVTFCVASSH---RL-PFADQSLDAIIRIYAPCKAEELARVVKPGGIVITVTPGP 184 (272)
T ss_pred CeEEEECCCHHHHHHHHHhCCCCeEEEeecc---cC-CCcCCceeEEEEecCCCCHHHHHhhccCCCEEEEEeCCC
Confidence 57899994 4555555443221 11111111 01 112446999998766555778889999999998775443
No 176
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=49.79 E-value=29 Score=27.59 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=44.6
Q ss_pred hhhhCC--CEEEEEecC-CcHHHH----HhcCCCeeec-CCCCC-cccccCCCCCcccEEEECCCCC----Ccccccccc
Q 048785 126 LAKLGN--SHVTATCGA-RNIEFV----KSLGADEVLD-YKTPD-GAALKSPSGRKYDAVIHCARGI----PWSTFEPNL 192 (280)
Q Consensus 126 la~~~G--~~Vi~~~~~-~~~~~~----~~~g~~~v~~-~~~~~-~~~~~~~~~~~~d~v~d~~g~~----~~~~~~~~l 192 (280)
+|..+. .+++++..+ ++.+.+ ++.|.+..+. ....+ .+.+.....+.||+||--..-. .++.++++|
T Consensus 77 mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDliFIDadK~~yp~~le~~~~lL 156 (219)
T COG4122 77 MALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDLVFIDADKADYPEYLERALPLL 156 (219)
T ss_pred HHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccEEEEeCChhhCHHHHHHHHHHh
Confidence 444444 478888865 555555 4567654321 11112 2223333456799988655532 288999999
Q ss_pred cCCcEEEE
Q 048785 193 AENGKVID 200 (280)
Q Consensus 193 ~~~g~~v~ 200 (280)
++||.++.
T Consensus 157 r~GGliv~ 164 (219)
T COG4122 157 RPGGLIVA 164 (219)
T ss_pred CCCcEEEE
Confidence 99999874
No 177
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=48.47 E-value=36 Score=27.58 Aligned_cols=65 Identities=12% Similarity=0.005 Sum_probs=39.2
Q ss_pred CCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCC-------CCcccccccccCCcEEEEe
Q 048785 131 NSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARG-------IPWSTFEPNLAENGKVIDL 201 (280)
Q Consensus 131 G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~g~~v~~ 201 (280)
+++|++++.+ .-.+.+++.+.+ ++..+. ........||+|+....- ..+..+.+.|+|+|+++..
T Consensus 53 ~~~v~gvD~s~~~~~~a~~~~~~-~~~~d~-----~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 53 GAVIEALDSSPEMVAAARERGVD-ARTGDV-----RDWKPKPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCEEEEEECCHHHHHHHHhcCCc-EEEcCh-----hhCCCCCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 6799999954 555666554433 222111 111123469999975541 1156788889999998764
No 178
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=47.99 E-value=30 Score=27.68 Aligned_cols=31 Identities=10% Similarity=-0.063 Sum_probs=23.7
Q ss_pred CcccEEEECCCC----C-----CcccccccccCCcEEEEe
Q 048785 171 RKYDAVIHCARG----I-----PWSTFEPNLAENGKVIDL 201 (280)
Q Consensus 171 ~~~d~v~d~~g~----~-----~~~~~~~~l~~~g~~v~~ 201 (280)
+.||.|+|+..= + ..+.+.++|+++|+++.+
T Consensus 123 ~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll 162 (226)
T PRK13256 123 PVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLL 162 (226)
T ss_pred CCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 469999997662 1 266788899999998766
No 179
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=47.83 E-value=37 Score=28.85 Aligned_cols=74 Identities=19% Similarity=0.176 Sum_probs=41.1
Q ss_pred hhhhCC--CEEEEEecC-CcHHHH----HhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcE
Q 048785 126 LAKLGN--SHVTATCGA-RNIEFV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGK 197 (280)
Q Consensus 126 la~~~G--~~Vi~~~~~-~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~ 197 (280)
+++..+ ..|++++.+ +..+.+ ++.|.+.+........... .....||+|+.+.+-.. .....+.|+++|+
T Consensus 98 LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~--~~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~ 175 (322)
T PRK13943 98 MSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGV--PEFAPYDVIFVTVGVDEVPETWFTQLKEGGR 175 (322)
T ss_pred HHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcc--cccCCccEEEECCchHHhHHHHHHhcCCCCE
Confidence 344444 368888854 433333 3466553322111111111 11246999999877544 3466788999999
Q ss_pred EEEe
Q 048785 198 VIDL 201 (280)
Q Consensus 198 ~v~~ 201 (280)
++..
T Consensus 176 Lvv~ 179 (322)
T PRK13943 176 VIVP 179 (322)
T ss_pred EEEE
Confidence 8763
No 180
>PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A.
Probab=47.17 E-value=25 Score=23.42 Aligned_cols=28 Identities=14% Similarity=0.097 Sum_probs=15.2
Q ss_pred CcccEEEECCCCC-------CcccccccccCCcEE
Q 048785 171 RKYDAVIHCARGI-------PWSTFEPNLAENGKV 198 (280)
Q Consensus 171 ~~~d~v~d~~g~~-------~~~~~~~~l~~~g~~ 198 (280)
+.||+|+-..--. .+..+.++|+|||++
T Consensus 65 ~~fD~V~~~~vl~~l~~~~~~l~~~~~~L~pgG~l 99 (99)
T PF08242_consen 65 ESFDLVVASNVLHHLEDIEAVLRNIYRLLKPGGIL 99 (99)
T ss_dssp ---SEEEEE-TTS--S-HHHHHHHHTTT-TSS-EE
T ss_pred cccceehhhhhHhhhhhHHHHHHHHHHHcCCCCCC
Confidence 5799998653321 166778888999875
No 181
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=46.48 E-value=50 Score=27.50 Aligned_cols=75 Identities=13% Similarity=0.176 Sum_probs=44.4
Q ss_pred hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCc-ccccccccCCcEEEEeCC
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPW-STFEPNLAENGKVIDLTP 203 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~g~~v~~g~ 203 (280)
.++.+|++|++..++ ++.+.+.+.|... +...+. .+. -..+|++|+|+....+ ...++.++++..++.++.
T Consensus 169 ~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-~~~~~l-~~~-----l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas 241 (287)
T TIGR02853 169 TFSALGARVFVGARSSADLARITEMGLIP-FPLNKL-EEK-----VAEIDIVINTIPALVLTADVLSKLPKHAVIIDLAS 241 (287)
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHCCCee-ecHHHH-HHH-----hccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCc
Confidence 455678888888765 4555555555431 111110 011 1258999999875432 245667788888888876
Q ss_pred Cchh
Q 048785 204 TPSA 207 (280)
Q Consensus 204 ~~~~ 207 (280)
.+..
T Consensus 242 ~Pg~ 245 (287)
T TIGR02853 242 KPGG 245 (287)
T ss_pred CCCC
Confidence 5543
No 182
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=45.27 E-value=47 Score=25.42 Aligned_cols=67 Identities=12% Similarity=0.198 Sum_probs=37.1
Q ss_pred CCEEEEEecC-CcHHHH----HhcCCCe--eecCCCCCcccccCCCCCcccEEEECCCCC---CcccccccccCCcEEEE
Q 048785 131 NSHVTATCGA-RNIEFV----KSLGADE--VLDYKTPDGAALKSPSGRKYDAVIHCARGI---PWSTFEPNLAENGKVID 200 (280)
Q Consensus 131 G~~Vi~~~~~-~~~~~~----~~~g~~~--v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~g~~v~ 200 (280)
+++|++++.+ +..+.+ ++.+.+. ++..+.. . . ...+.||+|+-..-.. .++.+.+.|+++|+++.
T Consensus 66 ~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~--~-~--~~~~~fD~I~s~~~~~~~~~~~~~~~~LkpgG~lvi 140 (181)
T TIGR00138 66 ELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAE--D-F--QHEEQFDVITSRALASLNVLLELTLNLLKVGGYFLA 140 (181)
T ss_pred CCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchh--h-c--cccCCccEEEehhhhCHHHHHHHHHHhcCCCCEEEE
Confidence 3589999965 433333 3445332 2222111 1 1 2245799888643211 15567888999999886
Q ss_pred eC
Q 048785 201 LT 202 (280)
Q Consensus 201 ~g 202 (280)
.-
T Consensus 141 ~~ 142 (181)
T TIGR00138 141 YK 142 (181)
T ss_pred Ec
Confidence 53
No 183
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=43.97 E-value=20 Score=27.78 Aligned_cols=31 Identities=10% Similarity=0.147 Sum_probs=21.1
Q ss_pred CcccEEEECCC-----C----CCcccccccccCCcEEEEe
Q 048785 171 RKYDAVIHCAR-----G----IPWSTFEPNLAENGKVIDL 201 (280)
Q Consensus 171 ~~~d~v~d~~g-----~----~~~~~~~~~l~~~g~~v~~ 201 (280)
..||+|+.+.. . ..+..+.+.|+++|.++.+
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 46999986532 1 1266788899999985544
No 184
>PRK04266 fibrillarin; Provisional
Probab=43.32 E-value=75 Score=25.37 Aligned_cols=29 Identities=17% Similarity=0.091 Sum_probs=21.8
Q ss_pred cccEEEECCCCCC-----cccccccccCCcEEEE
Q 048785 172 KYDAVIHCARGIP-----WSTFEPNLAENGKVID 200 (280)
Q Consensus 172 ~~d~v~d~~g~~~-----~~~~~~~l~~~g~~v~ 200 (280)
.+|+++.....+. +..+.+.|+++|+++.
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI 174 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLL 174 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEE
Confidence 4999996554321 5678889999999987
No 185
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=43.29 E-value=1.4e+02 Score=22.48 Aligned_cols=72 Identities=13% Similarity=0.005 Sum_probs=40.7
Q ss_pred hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCc--ccccccccCCcEEEEeC
Q 048785 126 LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPW--STFEPNLAENGKVIDLT 202 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~--~~~~~~l~~~g~~v~~g 202 (280)
-++.+|++|+++.. |-+.-.+..-|.. +..- .+.. ...|+++.++|+..+ ..-++.|+.+..+...|
T Consensus 41 ~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~~~----~~a~-----~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~G 110 (162)
T PF00670_consen 41 ALRGLGARVTVTEIDPIRALQAAMDGFE-VMTL----EEAL-----RDADIFVTATGNKDVITGEHFRQMKDGAILANAG 110 (162)
T ss_dssp HHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE-H----HHHT-----TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESS
T ss_pred HHhhCCCEEEEEECChHHHHHhhhcCcE-ecCH----HHHH-----hhCCEEEECCCCccccCHHHHHHhcCCeEEeccC
Confidence 56678999999885 4443333333433 2110 1111 247999999998763 46778889988888888
Q ss_pred CCchh
Q 048785 203 PTPSA 207 (280)
Q Consensus 203 ~~~~~ 207 (280)
..+.+
T Consensus 111 h~d~E 115 (162)
T PF00670_consen 111 HFDVE 115 (162)
T ss_dssp SSTTS
T ss_pred cCcee
Confidence 65543
No 186
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=43.12 E-value=18 Score=25.06 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=27.0
Q ss_pred ccccccceEEEEEeCCCCCCCCCCCEEEEe
Q 048785 45 YIPATDVAGEIIEVGSEVKNFKAGYNVVAI 74 (280)
Q Consensus 45 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 74 (280)
.++|-.++|.|.--|......++||+|+.+
T Consensus 58 vI~g~~gSg~I~lNGAAAr~~~~GD~vII~ 87 (111)
T cd06919 58 VIPGERGSGVICLNGAAARLGQPGDRVIIM 87 (111)
T ss_pred EEEcCCCCCEEEeCCHHHhcCCCCCEEEEE
Confidence 578999999999999998999999999876
No 187
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=42.12 E-value=26 Score=27.81 Aligned_cols=30 Identities=17% Similarity=-0.036 Sum_probs=21.8
Q ss_pred CcccEEEECCCC---------CCcccccccccCCcEEEE
Q 048785 171 RKYDAVIHCARG---------IPWSTFEPNLAENGKVID 200 (280)
Q Consensus 171 ~~~d~v~d~~g~---------~~~~~~~~~l~~~g~~v~ 200 (280)
..||.|+|+..- ..+..+.++|+++|++..
T Consensus 115 ~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 115 ADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred CCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 368999996641 126788899999987543
No 188
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=42.04 E-value=21 Score=28.99 Aligned_cols=70 Identities=14% Similarity=0.056 Sum_probs=39.5
Q ss_pred CCCEEEEEec-CCcHHHHHh----cCCC---eeecCCCCCcccccCCCCCcccEEEECCC-----CC--CcccccccccC
Q 048785 130 GNSHVTATCG-ARNIEFVKS----LGAD---EVLDYKTPDGAALKSPSGRKYDAVIHCAR-----GI--PWSTFEPNLAE 194 (280)
Q Consensus 130 ~G~~Vi~~~~-~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-----~~--~~~~~~~~l~~ 194 (280)
.|.+|++++. ++..+.+++ .|.. .++..+. ..+.......||+|+.... .+ .+..+.+.|+|
T Consensus 65 ~g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~---~~l~~~~~~~fD~V~~~~vl~~~~~~~~~l~~~~~~Lkp 141 (255)
T PRK11036 65 LGHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAA---QDIAQHLETPVDLILFHAVLEWVADPKSVLQTLWSVLRP 141 (255)
T ss_pred cCCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCH---HHHhhhcCCCCCEEEehhHHHhhCCHHHHHHHHHHHcCC
Confidence 3789999995 455555543 3321 1221111 1111122456999986432 21 26788899999
Q ss_pred CcEEEEeC
Q 048785 195 NGKVIDLT 202 (280)
Q Consensus 195 ~g~~v~~g 202 (280)
+|+++.+-
T Consensus 142 gG~l~i~~ 149 (255)
T PRK11036 142 GGALSLMF 149 (255)
T ss_pred CeEEEEEE
Confidence 99997653
No 189
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=41.94 E-value=57 Score=25.97 Aligned_cols=55 Identities=18% Similarity=0.206 Sum_probs=34.9
Q ss_pred hCCCEEEEEecC-CcHHHHH-hcCCC-eeecCCCCC-----cccccCCCCCcccEEEECCCCC
Q 048785 129 LGNSHVTATCGA-RNIEFVK-SLGAD-EVLDYKTPD-----GAALKSPSGRKYDAVIHCARGI 183 (280)
Q Consensus 129 ~~G~~Vi~~~~~-~~~~~~~-~~g~~-~v~~~~~~~-----~~~~~~~~~~~~d~v~d~~g~~ 183 (280)
..|+.|+++.+. +.++.+. ++|-. .-+|-.++. .........++.|+.++..|.+
T Consensus 30 ~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~ 92 (289)
T KOG1209|consen 30 RNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQS 92 (289)
T ss_pred hCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCC
Confidence 358999999976 7776664 77732 334443332 1223334667899999988853
No 190
>PRK04148 hypothetical protein; Provisional
Probab=40.55 E-value=59 Score=23.63 Aligned_cols=26 Identities=19% Similarity=0.144 Sum_probs=19.0
Q ss_pred hCCCEEEEEec-CCcHHHHHhcCCCee
Q 048785 129 LGNSHVTATCG-ARNIEFVKSLGADEV 154 (280)
Q Consensus 129 ~~G~~Vi~~~~-~~~~~~~~~~g~~~v 154 (280)
..|..|++++. ++..+.+++.+.+.+
T Consensus 37 ~~G~~ViaIDi~~~aV~~a~~~~~~~v 63 (134)
T PRK04148 37 ESGFDVIVIDINEKAVEKAKKLGLNAF 63 (134)
T ss_pred HCCCEEEEEECCHHHHHHHHHhCCeEE
Confidence 46899999995 566777777765444
No 191
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=40.31 E-value=22 Score=25.31 Aligned_cols=30 Identities=17% Similarity=0.116 Sum_probs=27.0
Q ss_pred ccccccceEEEEEeCCCCCCCCCCCEEEEe
Q 048785 45 YIPATDVAGEIIEVGSEVKNFKAGYNVVAI 74 (280)
Q Consensus 45 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 74 (280)
.++|-.++|.|---|......++||+|+.+
T Consensus 59 vI~G~~GSg~I~lNGAAArl~~~GD~VII~ 88 (126)
T TIGR00223 59 AIAGKRGSRIICVNGAAARCVSVGDIVIIA 88 (126)
T ss_pred EEEcCCCCCEEEeCCHHHhcCCCCCEEEEE
Confidence 588999999999999999999999999876
No 192
>PF10844 DUF2577: Protein of unknown function (DUF2577); InterPro: IPR022555 This family of proteins has no known function
Probab=40.30 E-value=34 Score=23.33 Aligned_cols=23 Identities=17% Similarity=0.320 Sum_probs=16.3
Q ss_pred CCCCCCEEEEeecCCCCCcceeEEeec
Q 048785 64 NFKAGYNVVAILNHFSGGGLAEFAMVK 90 (280)
Q Consensus 64 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~ 90 (280)
.|++||+|+... ..+-+.|++++
T Consensus 76 ~Lk~GD~V~ll~----~~~gQ~yiVlD 98 (100)
T PF10844_consen 76 GLKVGDKVLLLR----VQGGQKYIVLD 98 (100)
T ss_pred CCcCCCEEEEEE----ecCCCEEEEEE
Confidence 599999999874 22336777664
No 193
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=40.03 E-value=80 Score=24.63 Aligned_cols=72 Identities=19% Similarity=0.119 Sum_probs=40.2
Q ss_pred hhhhCC--CEEEEEecC-CcHHHH----HhcCCC---eeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccC
Q 048785 126 LAKLGN--SHVTATCGA-RNIEFV----KSLGAD---EVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAE 194 (280)
Q Consensus 126 la~~~G--~~Vi~~~~~-~~~~~~----~~~g~~---~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~ 194 (280)
+++..+ .+|++++.+ +-.+.+ +..|.. .++..+... .. .....||.|+-+..... .+.+.+.|++
T Consensus 90 la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~--~~--~~~~~fD~Ii~~~~~~~~~~~l~~~L~~ 165 (205)
T PRK13944 90 CAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKR--GL--EKHAPFDAIIVTAAASTIPSALVRQLKD 165 (205)
T ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCccc--CC--ccCCCccEEEEccCcchhhHHHHHhcCc
Confidence 344443 589999954 433333 344432 223222211 11 12347999987665433 4567789999
Q ss_pred CcEEEEe
Q 048785 195 NGKVIDL 201 (280)
Q Consensus 195 ~g~~v~~ 201 (280)
+|+++..
T Consensus 166 gG~lvi~ 172 (205)
T PRK13944 166 GGVLVIP 172 (205)
T ss_pred CcEEEEE
Confidence 9998764
No 194
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=38.86 E-value=73 Score=25.72 Aligned_cols=67 Identities=10% Similarity=0.021 Sum_probs=39.1
Q ss_pred CCEEEEEecC-CcHHHHHhcCC-CeeecCCCCCcccccCCCCCcccEEEECCCC-------CCcccccccccCCcEEEEe
Q 048785 131 NSHVTATCGA-RNIEFVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVIHCARG-------IPWSTFEPNLAENGKVIDL 201 (280)
Q Consensus 131 G~~Vi~~~~~-~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~g~~v~~ 201 (280)
+.+|++++.+ .-.+.+++.-. ..++..+.. .......||+|+....- ..+..+.+.|+++|+++..
T Consensus 55 ~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~-----~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 55 AARITGIDSSPAMLAEARSRLPDCQFVEADIA-----SWQPPQALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCEEEEEECCHHHHHHHHHhCCCCeEEECchh-----ccCCCCCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 5699999954 55555544322 122222111 11223479999865542 1166788899999998765
Q ss_pred C
Q 048785 202 T 202 (280)
Q Consensus 202 g 202 (280)
.
T Consensus 130 ~ 130 (258)
T PRK01683 130 M 130 (258)
T ss_pred C
Confidence 3
No 195
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=38.35 E-value=45 Score=27.66 Aligned_cols=68 Identities=15% Similarity=0.247 Sum_probs=41.4
Q ss_pred hhhhCCCEEEEEe-cCCcHHHHH----hcCCC---eee--cCCCCCcccccCCCCCcccEE-----EECCCCCC----cc
Q 048785 126 LAKLGNSHVTATC-GARNIEFVK----SLGAD---EVL--DYKTPDGAALKSPSGRKYDAV-----IHCARGIP----WS 186 (280)
Q Consensus 126 la~~~G~~Vi~~~-~~~~~~~~~----~~g~~---~v~--~~~~~~~~~~~~~~~~~~d~v-----~d~~g~~~----~~ 186 (280)
+|+.+|++|++++ |++..+.++ +.|-. .+. ++++. . +.||-| |+.+|... +.
T Consensus 90 aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~--------~-e~fDrIvSvgmfEhvg~~~~~~ff~ 160 (283)
T COG2230 90 AAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDF--------E-EPFDRIVSVGMFEHVGKENYDDFFK 160 (283)
T ss_pred HHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccccc--------c-cccceeeehhhHHHhCcccHHHHHH
Confidence 7888899999999 655555543 45533 111 11111 1 126544 34555533 77
Q ss_pred cccccccCCcEEEEeC
Q 048785 187 TFEPNLAENGKVIDLT 202 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g 202 (280)
.+.++|+++|++.+..
T Consensus 161 ~~~~~L~~~G~~llh~ 176 (283)
T COG2230 161 KVYALLKPGGRMLLHS 176 (283)
T ss_pred HHHhhcCCCceEEEEE
Confidence 8999999999987543
No 196
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=38.33 E-value=75 Score=25.90 Aligned_cols=78 Identities=19% Similarity=0.147 Sum_probs=46.5
Q ss_pred hhhhCCC--EEEEEe-cCCcHHHH----HhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC--CcccccccccCCc
Q 048785 126 LAKLGNS--HVTATC-GARNIEFV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI--PWSTFEPNLAENG 196 (280)
Q Consensus 126 la~~~G~--~Vi~~~-~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~g 196 (280)
||+..|. +|+... +.+..+.+ +.+|....+..... +..+...+..||.+|=-...+ .++.+.+.|+++|
T Consensus 112 La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~--Dv~~~~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg 189 (256)
T COG2519 112 LARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG--DVREGIDEEDVDAVFLDLPDPWNVLEHVSDALKPGG 189 (256)
T ss_pred HHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec--cccccccccccCEEEEcCCChHHHHHHHHHHhCCCc
Confidence 5555564 899988 44554444 34554332221111 122222333789888666554 3889999999999
Q ss_pred EEEEeCCCc
Q 048785 197 KVIDLTPTP 205 (280)
Q Consensus 197 ~~v~~g~~~ 205 (280)
+++.+.+.-
T Consensus 190 ~~~~y~P~v 198 (256)
T COG2519 190 VVVVYSPTV 198 (256)
T ss_pred EEEEEcCCH
Confidence 999876443
No 197
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=38.01 E-value=1.1e+02 Score=24.03 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=22.3
Q ss_pred CcccEEEECCCCCC-cccccccccCCcEEEEe
Q 048785 171 RKYDAVIHCARGIP-WSTFEPNLAENGKVIDL 201 (280)
Q Consensus 171 ~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~ 201 (280)
..||+|+-+..... ...+.+.|+++|+++..
T Consensus 145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 47998885544333 55677899999998764
No 198
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=37.86 E-value=73 Score=27.48 Aligned_cols=68 Identities=21% Similarity=0.295 Sum_probs=37.5
Q ss_pred CCEEEEEecC-CcHHHH----HhcCCCe--eecCCCCCcccccCCCCCcccEEEE---CCCCCC----------------
Q 048785 131 NSHVTATCGA-RNIEFV----KSLGADE--VLDYKTPDGAALKSPSGRKYDAVIH---CARGIP---------------- 184 (280)
Q Consensus 131 G~~Vi~~~~~-~~~~~~----~~~g~~~--v~~~~~~~~~~~~~~~~~~~d~v~d---~~g~~~---------------- 184 (280)
|..|++.+.+ .|...+ +.+|... +++.++..... ....+..||.|+- |+|.-.
T Consensus 182 ~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~-~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i 260 (355)
T COG0144 182 GAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAE-LLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDI 260 (355)
T ss_pred CceEEEEcCCHHHHHHHHHHHHHcCCCceEEEecccccccc-cccccCcCcEEEECCCCCCCcccccCccccccCCHHHH
Confidence 5678999954 565444 5688774 33332221110 1112225887765 666321
Q ss_pred ----------cccccccccCCcEEE
Q 048785 185 ----------WSTFEPNLAENGKVI 199 (280)
Q Consensus 185 ----------~~~~~~~l~~~g~~v 199 (280)
+..+++++++||+++
T Consensus 261 ~~l~~lQ~~iL~~a~~~lk~GG~LV 285 (355)
T COG0144 261 AELAKLQKEILAAALKLLKPGGVLV 285 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 334667778888776
No 199
>PRK10206 putative oxidoreductase; Provisional
Probab=37.61 E-value=1.9e+02 Score=24.67 Aligned_cols=110 Identities=11% Similarity=0.056 Sum_probs=58.3
Q ss_pred CCEEEEEecC--CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEeCCCch-
Q 048785 131 NSHVTATCGA--RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTPTPS- 206 (280)
Q Consensus 131 G~~Vi~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~~- 206 (280)
+++++++++. ++.+.+++++...++ ++. .+. .....+|+|+.|+.+.. .+.+..++..|-++. +.-+-.
T Consensus 27 ~~~l~av~d~~~~~~~~~~~~~~~~~~--~~~-~el---l~~~~iD~V~I~tp~~~H~~~~~~al~aGkhVl-~EKPla~ 99 (344)
T PRK10206 27 SWHVAHIFRRHAKPEEQAPIYSHIHFT--SDL-DEV---LNDPDVKLVVVCTHADSHFEYAKRALEAGKNVL-VEKPFTP 99 (344)
T ss_pred CEEEEEEEcCChhHHHHHHhcCCCccc--CCH-HHH---hcCCCCCEEEEeCCchHHHHHHHHHHHcCCcEE-EecCCcC
Confidence 5788888853 334444555422222 111 122 22356999999998754 788888887775543 442211
Q ss_pred --hhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCe
Q 048785 207 --AMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKI 247 (280)
Q Consensus 207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~ 247 (280)
....-.......++..+...+.......+..+-+++++|.+
T Consensus 100 ~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~li~~g~i 142 (344)
T PRK10206 100 TLAEAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKL 142 (344)
T ss_pred CHHHHHHHHHHHHHhCCEEEEEEeeeECHHHHHHHHHHHcCCC
Confidence 11111122222234443332222234567778888999876
No 200
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=37.56 E-value=35 Score=30.61 Aligned_cols=72 Identities=18% Similarity=0.130 Sum_probs=41.1
Q ss_pred hhhhCCCEEEEEe-cCCcHHHHHhc--CCC---eeecCCCCCcccccCCCCCcccEEEECCCC-------CCcccccccc
Q 048785 126 LAKLGNSHVTATC-GARNIEFVKSL--GAD---EVLDYKTPDGAALKSPSGRKYDAVIHCARG-------IPWSTFEPNL 192 (280)
Q Consensus 126 la~~~G~~Vi~~~-~~~~~~~~~~~--g~~---~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-------~~~~~~~~~l 192 (280)
+++..|++|++++ +++..+.+++. +.. .++..+ . ... ....+.||+|+....- ..+..+.+.|
T Consensus 284 la~~~~~~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d-~--~~~-~~~~~~fD~I~s~~~l~h~~d~~~~l~~~~r~L 359 (475)
T PLN02336 284 MAENFDVHVVGIDLSVNMISFALERAIGRKCSVEFEVAD-C--TKK-TYPDNSFDVIYSRDTILHIQDKPALFRSFFKWL 359 (475)
T ss_pred HHHhcCCEEEEEECCHHHHHHHHHHhhcCCCceEEEEcC-c--ccC-CCCCCCEEEEEECCcccccCCHHHHHHHHHHHc
Confidence 6666788999999 44555555432 111 111111 0 000 1123569999874321 1267888999
Q ss_pred cCCcEEEEe
Q 048785 193 AENGKVIDL 201 (280)
Q Consensus 193 ~~~g~~v~~ 201 (280)
+|+|+++..
T Consensus 360 kpgG~l~i~ 368 (475)
T PLN02336 360 KPGGKVLIS 368 (475)
T ss_pred CCCeEEEEE
Confidence 999998865
No 201
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=37.09 E-value=25 Score=25.03 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=26.8
Q ss_pred ccccccceEEEEEeCCCCCCCCCCCEEEEe
Q 048785 45 YIPATDVAGEIIEVGSEVKNFKAGYNVVAI 74 (280)
Q Consensus 45 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 74 (280)
.++|-.++|.|.--|......++||+|+.+
T Consensus 59 vI~g~~GSg~I~lNGAAAr~~~~GD~vII~ 88 (126)
T PRK05449 59 VIAGERGSGVICLNGAAARLVQVGDLVIIA 88 (126)
T ss_pred EEEcCCCCCEEEeCCHHHhcCCCCCEEEEE
Confidence 578999999999999988899999999876
No 202
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=36.76 E-value=35 Score=29.85 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=40.1
Q ss_pred hCCC-EEEEEe-cCCcHHHHHh----cCCC----eeecCCCCCcccccCCCCCcccEEEE---CCC-CCC----------
Q 048785 129 LGNS-HVTATC-GARNIEFVKS----LGAD----EVLDYKTPDGAALKSPSGRKYDAVIH---CAR-GIP---------- 184 (280)
Q Consensus 129 ~~G~-~Vi~~~-~~~~~~~~~~----~g~~----~v~~~~~~~~~~~~~~~~~~~d~v~d---~~g-~~~---------- 184 (280)
.-|| +|+.++ +...++.+++ .|.+ ..+..+...+-......|..||+||- +.+ ++.
T Consensus 237 ~gGA~~vt~VD~S~~al~~a~~N~~LNg~~~~~~~~i~~Dvf~~l~~~~~~g~~fDlIilDPPsF~r~k~~~~~~~rdy~ 316 (393)
T COG1092 237 LGGASEVTSVDLSKRALEWARENAELNGLDGDRHRFIVGDVFKWLRKAERRGEKFDLIILDPPSFARSKKQEFSAQRDYK 316 (393)
T ss_pred hcCCCceEEEeccHHHHHHHHHHHHhcCCCccceeeehhhHHHHHHHHHhcCCcccEEEECCcccccCcccchhHHHHHH
Confidence 3588 999999 4455666643 2221 22222222211112234568998874 111 110
Q ss_pred --cccccccccCCcEEEEeC
Q 048785 185 --WSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 185 --~~~~~~~l~~~g~~v~~g 202 (280)
...+.++|+++|.++.+.
T Consensus 317 ~l~~~~~~iL~pgG~l~~~s 336 (393)
T COG1092 317 DLNDLALRLLAPGGTLVTSS 336 (393)
T ss_pred HHHHHHHHHcCCCCEEEEEe
Confidence 345777889999888765
No 203
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=35.87 E-value=24 Score=24.75 Aligned_cols=30 Identities=23% Similarity=0.362 Sum_probs=23.9
Q ss_pred ccccccceEEEEEeCCCCCCCCCCCEEEEe
Q 048785 45 YIPATDVAGEIIEVGSEVKNFKAGYNVVAI 74 (280)
Q Consensus 45 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 74 (280)
.++|-.++|.|.--|......++||+|+.+
T Consensus 59 vI~g~~GSg~I~lNGaAArl~~~GD~vII~ 88 (116)
T PF02261_consen 59 VIPGERGSGVICLNGAAARLVQVGDRVIIM 88 (116)
T ss_dssp EEEESTTTT-EEEEGGGGGCS-TT-EEEEE
T ss_pred EEEccCCCcEEEECCHHHhccCCCCEEEEE
Confidence 578888899999999999999999999876
No 204
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=35.58 E-value=59 Score=28.91 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=39.1
Q ss_pred hhhhC--CCEEEEEec-CCcHHHH----HhcCCCee--ecCCCCCcccccCCCCCcccEEEE---CCCCCC---------
Q 048785 126 LAKLG--NSHVTATCG-ARNIEFV----KSLGADEV--LDYKTPDGAALKSPSGRKYDAVIH---CARGIP--------- 184 (280)
Q Consensus 126 la~~~--G~~Vi~~~~-~~~~~~~----~~~g~~~v--~~~~~~~~~~~~~~~~~~~d~v~d---~~g~~~--------- 184 (280)
++..+ +.+|++++. +++.+.+ +.+|.+.+ +..+... ......+.||.|+- |+|...
T Consensus 255 la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~---l~~~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~ 331 (431)
T PRK14903 255 IAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAER---LTEYVQDTFDRILVDAPCTSLGTARNHPEVLR 331 (431)
T ss_pred HHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhh---hhhhhhccCCEEEECCCCCCCccccCChHHHH
Confidence 44444 459999995 4665555 35565432 2211111 11011346999885 554321
Q ss_pred -----------------cccccccccCCcEEEE
Q 048785 185 -----------------WSTFEPNLAENGKVID 200 (280)
Q Consensus 185 -----------------~~~~~~~l~~~g~~v~ 200 (280)
+..+.+.|++||+++.
T Consensus 332 ~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvY 364 (431)
T PRK14903 332 RVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLY 364 (431)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3456778889998763
No 205
>KOG0339 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=34.58 E-value=3.5e+02 Score=24.84 Aligned_cols=79 Identities=14% Similarity=0.108 Sum_probs=39.2
Q ss_pred cccccccccCCcEEEEeCCCchhhHHHHHhhhhccceeeEEEEEc-------------CC-----HHHHHHHHHHHHCCC
Q 048785 185 WSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTFSKKQLVPLLVI-------------PK-----GENLVFLVKLLKEGK 246 (280)
Q Consensus 185 ~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-----~~~~~~~~~~i~~g~ 246 (280)
...+...++|.-..+++...-........+.+.....++...... ++ ...++.+.+++++|+
T Consensus 391 VrSI~~hirpdrQtllFsaTf~~kIe~lard~L~dpVrvVqg~vgean~dITQ~V~V~~s~~~Kl~wl~~~L~~f~S~gk 470 (731)
T KOG0339|consen 391 VRSIKQHIRPDRQTLLFSATFKKKIEKLARDILSDPVRVVQGEVGEANEDITQTVSVCPSEEKKLNWLLRHLVEFSSEGK 470 (731)
T ss_pred HHHHHhhcCCcceEEEeeccchHHHHHHHHHHhcCCeeEEEeehhccccchhheeeeccCcHHHHHHHHHHhhhhccCCc
Confidence 455666667776666565444333333334443333332222111 11 134556666777777
Q ss_pred eeEeccceecchhHHHH
Q 048785 247 IKTLIDSKHLLSKAEDA 263 (280)
Q Consensus 247 ~~~~~~~~~~~~~~~~a 263 (280)
+-..+++.-.++++..-
T Consensus 471 vlifVTKk~~~e~i~a~ 487 (731)
T KOG0339|consen 471 VLIFVTKKADAEEIAAN 487 (731)
T ss_pred EEEEEeccCCHHHHHHH
Confidence 76666655555555443
No 206
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=33.89 E-value=29 Score=29.53 Aligned_cols=33 Identities=15% Similarity=0.147 Sum_probs=24.1
Q ss_pred CcccEEEECCCCCC-cccccccccCCcEEEEeCC
Q 048785 171 RKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTP 203 (280)
Q Consensus 171 ~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~ 203 (280)
.++|+||+|+|... ...+...+..|++.|.++.
T Consensus 88 ~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~Sa 121 (325)
T TIGR01532 88 LGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSH 121 (325)
T ss_pred cCCCEEEEccchhccHHHHHHHHHcCCeEEEecC
Confidence 47999999999754 4566667777777776653
No 207
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=33.86 E-value=1.3e+02 Score=26.58 Aligned_cols=73 Identities=18% Similarity=0.243 Sum_probs=38.9
Q ss_pred hhhhCC-CEEEEEec-CCcHHHH----HhcCCC-ee--ecCCCCCcccccCCCCCcccEEEE---CCCCCC---------
Q 048785 126 LAKLGN-SHVTATCG-ARNIEFV----KSLGAD-EV--LDYKTPDGAALKSPSGRKYDAVIH---CARGIP--------- 184 (280)
Q Consensus 126 la~~~G-~~Vi~~~~-~~~~~~~----~~~g~~-~v--~~~~~~~~~~~~~~~~~~~d~v~d---~~g~~~--------- 184 (280)
+++.++ .+|++++. +++.+.+ +.+|.. .+ .+.+... .........||.||- |+|...
T Consensus 256 la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~--~~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~ 333 (426)
T TIGR00563 256 ILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRG--PSQWAENEQFDRILLDAPCSATGVIRRHPDIKW 333 (426)
T ss_pred HHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccc--ccccccccccCEEEEcCCCCCCcccccCcchhh
Confidence 333344 69999995 4555444 456654 22 2211111 001112346999885 555211
Q ss_pred -----------------cccccccccCCcEEEE
Q 048785 185 -----------------WSTFEPNLAENGKVID 200 (280)
Q Consensus 185 -----------------~~~~~~~l~~~g~~v~ 200 (280)
+..+.+.|++||+++.
T Consensus 334 ~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvy 366 (426)
T TIGR00563 334 LRKPRDIAELAELQSEILDAIWPLLKTGGTLVY 366 (426)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3346778899998874
No 208
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=33.13 E-value=91 Score=26.17 Aligned_cols=14 Identities=29% Similarity=0.226 Sum_probs=10.5
Q ss_pred hhhhCCCEEEEEec
Q 048785 126 LAKLGNSHVTATCG 139 (280)
Q Consensus 126 la~~~G~~Vi~~~~ 139 (280)
+.+.+|++|+-+..
T Consensus 103 ~l~a~GAevi~t~~ 116 (300)
T COG0031 103 LLRALGAEVILTPG 116 (300)
T ss_pred HHHHcCCEEEEcCC
Confidence 77777887777774
No 209
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=32.74 E-value=52 Score=26.90 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=39.9
Q ss_pred hhhCCCEEEEEec-CCcHHHHHhcCC-CeeecCCCCCccccc-CCCCCcccEEEECCC----C-----CCcccccccccC
Q 048785 127 AKLGNSHVTATCG-ARNIEFVKSLGA-DEVLDYKTPDGAALK-SPSGRKYDAVIHCAR----G-----IPWSTFEPNLAE 194 (280)
Q Consensus 127 a~~~G~~Vi~~~~-~~~~~~~~~~g~-~~v~~~~~~~~~~~~-~~~~~~~d~v~d~~g----~-----~~~~~~~~~l~~ 194 (280)
++..+++|++++- +...+.+++... ...+.....+ ... ....+.||+|+..-. . ..+..+.+.|+|
T Consensus 71 a~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~~~~~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkP 148 (263)
T PTZ00098 71 NEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILKKDFPENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKP 148 (263)
T ss_pred HhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECC--cccCCCCCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCC
Confidence 3445789999994 455555544211 1001100001 111 123456999986211 1 126678899999
Q ss_pred CcEEEEeC
Q 048785 195 NGKVIDLT 202 (280)
Q Consensus 195 ~g~~v~~g 202 (280)
+|+++...
T Consensus 149 GG~lvi~d 156 (263)
T PTZ00098 149 NGILLITD 156 (263)
T ss_pred CcEEEEEE
Confidence 99998764
No 210
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=32.72 E-value=73 Score=23.24 Aligned_cols=69 Identities=22% Similarity=0.211 Sum_probs=40.3
Q ss_pred CCEEEEEec-CCcHHHHH----hcCCC--eeecCCCCCcccccCCCCCcccEEEECCCC-----C--CcccccccccCCc
Q 048785 131 NSHVTATCG-ARNIEFVK----SLGAD--EVLDYKTPDGAALKSPSGRKYDAVIHCARG-----I--PWSTFEPNLAENG 196 (280)
Q Consensus 131 G~~Vi~~~~-~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~g 196 (280)
+.++++++- ++..+.++ ..+.+ ..+..+-.. +...-...||+|+....- . .++.+.+.++++|
T Consensus 28 ~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~d~~~---l~~~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G 104 (152)
T PF13847_consen 28 GAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQGDIED---LPQELEEKFDIIISNGVLHHFPDPEKVLKNIIRLLKPGG 104 (152)
T ss_dssp TSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEESBTTC---GCGCSSTTEEEEEEESTGGGTSHHHHHHHHHHHHEEEEE
T ss_pred CCEEEEEECcHHHHHHhhcccccccccccceEEeehhc---cccccCCCeeEEEEcCchhhccCHHHHHHHHHHHcCCCc
Confidence 679999994 45555553 45554 222221111 111111679999986431 1 2677888899999
Q ss_pred EEEEeC
Q 048785 197 KVIDLT 202 (280)
Q Consensus 197 ~~v~~g 202 (280)
+++...
T Consensus 105 ~~i~~~ 110 (152)
T PF13847_consen 105 ILIISD 110 (152)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887654
No 211
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.40 E-value=81 Score=25.32 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=45.2
Q ss_pred CCEEEEEecC-Cc----HHHHHhcCCCeeecCCCCC-----cccccCCCCCcccEEEECCCCC----CcccccccccCCc
Q 048785 131 NSHVTATCGA-RN----IEFVKSLGADEVLDYKTPD-----GAALKSPSGRKYDAVIHCARGI----PWSTFEPNLAENG 196 (280)
Q Consensus 131 G~~Vi~~~~~-~~----~~~~~~~g~~~v~~~~~~~-----~~~~~~~~~~~~d~v~d~~g~~----~~~~~~~~l~~~g 196 (280)
+.+|++.+-+ +. .++.+..|.++-++..... .+.+.......||.+|--..-. .+..+++++++||
T Consensus 98 dGrv~a~eid~~~~~~~~~~~k~agv~~KI~~i~g~a~esLd~l~~~~~~~tfDfaFvDadK~nY~~y~e~~l~Llr~GG 177 (237)
T KOG1663|consen 98 DGRVVAIEIDADAYEIGLELVKLAGVDHKITFIEGPALESLDELLADGESGTFDFAFVDADKDNYSNYYERLLRLLRVGG 177 (237)
T ss_pred CceEEEEecChHHHHHhHHHHHhccccceeeeeecchhhhHHHHHhcCCCCceeEEEEccchHHHHHHHHHHHhhccccc
Confidence 6799999944 32 3444566777777654433 2333444556799998544422 2778999999999
Q ss_pred EEEE
Q 048785 197 KVID 200 (280)
Q Consensus 197 ~~v~ 200 (280)
.++.
T Consensus 178 vi~~ 181 (237)
T KOG1663|consen 178 VIVV 181 (237)
T ss_pred EEEE
Confidence 8863
No 212
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=32.40 E-value=92 Score=27.69 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=11.4
Q ss_pred cccccccccCCcEEEE
Q 048785 185 WSTFEPNLAENGKVID 200 (280)
Q Consensus 185 ~~~~~~~l~~~g~~v~ 200 (280)
+..+.+.|++||+++.
T Consensus 367 L~~a~~~lkpgG~lvy 382 (434)
T PRK14901 367 LESLAPLLKPGGTLVY 382 (434)
T ss_pred HHHHHHhcCCCCEEEE
Confidence 4456778888888763
No 213
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=31.90 E-value=1e+02 Score=26.11 Aligned_cols=50 Identities=24% Similarity=0.351 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHCC-CeeEeccc-------eecchhHHHHHHHHhcCC--CcCcEEEe
Q 048785 230 PKGENLVFLVKLLKEG-KIKTLIDS-------KHLLSKAEDAWAKGADGH--ATGKIILE 279 (280)
Q Consensus 230 ~~~~~~~~~~~~i~~g-~~~~~~~~-------~~~~~~~~~a~~~~~~~~--~~gkvvi~ 279 (280)
.+.+.+.++.+.|.=- .++|..++ +-.-+++++||+..+++. ..+|++++
T Consensus 136 ~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqsvv~~~e~ve~AW~~A~~g~R~~~~RVIVE 195 (394)
T COG0027 136 DSLEELRAAVEKIGFPCVVKPVMSSSGKGQSVVRSPEDVEKAWEYAQQGGRGGSGRVIVE 195 (394)
T ss_pred ccHHHHHHHHHHcCCCeecccccccCCCCceeecCHHHHHHHHHHHHhcCCCCCCcEEEE
Confidence 4556666665544332 23454441 234689999999988664 34577653
No 214
>PLN02476 O-methyltransferase
Probab=31.64 E-value=72 Score=26.46 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=42.6
Q ss_pred hhhhCC--CEEEEEecC-CcHHHH----HhcCCCeeecCCCCC-ccccc----CCCCCcccEEEECCCCC----Cccccc
Q 048785 126 LAKLGN--SHVTATCGA-RNIEFV----KSLGADEVLDYKTPD-GAALK----SPSGRKYDAVIHCARGI----PWSTFE 189 (280)
Q Consensus 126 la~~~G--~~Vi~~~~~-~~~~~~----~~~g~~~v~~~~~~~-~~~~~----~~~~~~~d~v~d~~g~~----~~~~~~ 189 (280)
+|+.++ .+|+++..+ +..+.+ ++.|..+-+.....+ .+.+. ....+.||.||--.... .++.++
T Consensus 136 lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l 215 (278)
T PLN02476 136 VALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSSYDFAFVDADKRMYQDYFELLL 215 (278)
T ss_pred HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCCCCEEEECCCHHHHHHHHHHHH
Confidence 666653 478888854 444444 456654222211111 11111 11235799988665532 277889
Q ss_pred ccccCCcEEEE
Q 048785 190 PNLAENGKVID 200 (280)
Q Consensus 190 ~~l~~~g~~v~ 200 (280)
+.|++||.++.
T Consensus 216 ~lL~~GGvIV~ 226 (278)
T PLN02476 216 QLVRVGGVIVM 226 (278)
T ss_pred HhcCCCcEEEE
Confidence 99999999874
No 215
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=31.58 E-value=1.2e+02 Score=27.15 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=36.7
Q ss_pred CEEEEEec-CCcHHHH----HhcCCCee--ecCCCCCcccccCCCCCcccEEEE---CCCCC------------------
Q 048785 132 SHVTATCG-ARNIEFV----KSLGADEV--LDYKTPDGAALKSPSGRKYDAVIH---CARGI------------------ 183 (280)
Q Consensus 132 ~~Vi~~~~-~~~~~~~----~~~g~~~v--~~~~~~~~~~~~~~~~~~~d~v~d---~~g~~------------------ 183 (280)
.+|++++. +++.+.+ +..|.+.+ +..+... ......||.|+- |+|..
T Consensus 276 ~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~-----~~~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~ 350 (445)
T PRK14904 276 GQITAVDRYPQKLEKIRSHASALGITIIETIEGDARS-----FSPEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLA 350 (445)
T ss_pred cEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccc-----cccCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHH
Confidence 48999995 4555444 45665432 2211111 112346998885 65532
Q ss_pred --------CcccccccccCCcEEEEe
Q 048785 184 --------PWSTFEPNLAENGKVIDL 201 (280)
Q Consensus 184 --------~~~~~~~~l~~~g~~v~~ 201 (280)
.+..+.++|++||+++..
T Consensus 351 ~l~~~q~~iL~~a~~~lkpgG~lvys 376 (445)
T PRK14904 351 ELVGLQAELLDHAASLLKPGGVLVYA 376 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 144566788899988743
No 216
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=31.49 E-value=1.2e+02 Score=24.80 Aligned_cols=33 Identities=15% Similarity=0.011 Sum_probs=24.0
Q ss_pred CCcccEEEECCCCC-------CcccccccccCCcEEEEeC
Q 048785 170 GRKYDAVIHCARGI-------PWSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 170 ~~~~d~v~d~~g~~-------~~~~~~~~l~~~g~~v~~g 202 (280)
.+.||.|+-..+-. .+..+.+.|+|+|+++...
T Consensus 143 ~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d 182 (261)
T PLN02233 143 DCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILD 182 (261)
T ss_pred CCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence 45699998654421 1678889999999987764
No 217
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=29.52 E-value=50 Score=27.92 Aligned_cols=74 Identities=19% Similarity=0.186 Sum_probs=44.8
Q ss_pred hhhhCCCEEEEEecC-CcHHHHHhcCCCeeec-CCCCCcccccCCCCCcccEEEECCC--C-C----CcccccccccCCc
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVKSLGADEVLD-YKTPDGAALKSPSGRKYDAVIHCAR--G-I----PWSTFEPNLAENG 196 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~d~v~d~~g--~-~----~~~~~~~~l~~~g 196 (280)
+|..+|++|...+.+ +|++.+..+-..++-. ++.+. .++ ..-.+.|++|.++= + . ..+.+++.|++++
T Consensus 186 iA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~--~ie-e~v~~aDlvIgaVLIpgakaPkLvt~e~vk~MkpGs 262 (371)
T COG0686 186 IAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPS--NIE-EAVKKADLVIGAVLIPGAKAPKLVTREMVKQMKPGS 262 (371)
T ss_pred HHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHH--HHH-HHhhhccEEEEEEEecCCCCceehhHHHHHhcCCCc
Confidence 777788888888854 7777765433222211 11211 111 11235788888653 2 1 1668899999999
Q ss_pred EEEEeC
Q 048785 197 KVIDLT 202 (280)
Q Consensus 197 ~~v~~g 202 (280)
.++++.
T Consensus 263 VivDVA 268 (371)
T COG0686 263 VIVDVA 268 (371)
T ss_pred EEEEEE
Confidence 998875
No 218
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=29.08 E-value=42 Score=27.45 Aligned_cols=53 Identities=8% Similarity=-0.058 Sum_probs=31.2
Q ss_pred hCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCC
Q 048785 129 LGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCAR 181 (280)
Q Consensus 129 ~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g 181 (280)
..|.+|+++.. +...+.+...|...+....-............++|+|+|++-
T Consensus 21 ~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 21 AQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred hCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 34788888885 456666666655555432211122223445667899999876
No 219
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=29.00 E-value=95 Score=24.89 Aligned_cols=75 Identities=15% Similarity=0.036 Sum_probs=40.9
Q ss_pred hhhhCC--CEEEEEecC-CcHHHH----HhcCCCe---eecCCCCCc-ccc-cCCCCCcccEEEECCCCC----Cccccc
Q 048785 126 LAKLGN--SHVTATCGA-RNIEFV----KSLGADE---VLDYKTPDG-AAL-KSPSGRKYDAVIHCARGI----PWSTFE 189 (280)
Q Consensus 126 la~~~G--~~Vi~~~~~-~~~~~~----~~~g~~~---v~~~~~~~~-~~~-~~~~~~~~d~v~d~~g~~----~~~~~~ 189 (280)
+++.++ .+|++++.+ +..+.+ ++.|... ++..+.... ..+ .....+.||+||--..-+ .+..+.
T Consensus 86 la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~ 165 (234)
T PLN02781 86 TALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNNDPKPEFDFAFVDADKPNYVHFHEQLL 165 (234)
T ss_pred HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCCCCCCCCEEEECCCHHHHHHHHHHHH
Confidence 555543 499999954 444444 3445322 222211110 011 111135799998654422 277888
Q ss_pred ccccCCcEEEE
Q 048785 190 PNLAENGKVID 200 (280)
Q Consensus 190 ~~l~~~g~~v~ 200 (280)
+++++||.++.
T Consensus 166 ~ll~~GG~ii~ 176 (234)
T PLN02781 166 KLVKVGGIIAF 176 (234)
T ss_pred HhcCCCeEEEE
Confidence 99999998874
No 220
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=28.88 E-value=35 Score=28.28 Aligned_cols=67 Identities=12% Similarity=0.074 Sum_probs=37.2
Q ss_pred CCCEEEEEecC-CcHHHHH----hcCCC-eeecCCCCCcccccCCCCCcccEEEECCC----C-C----CcccccccccC
Q 048785 130 GNSHVTATCGA-RNIEFVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVIHCAR----G-I----PWSTFEPNLAE 194 (280)
Q Consensus 130 ~G~~Vi~~~~~-~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g----~-~----~~~~~~~~l~~ 194 (280)
.|.+|++++.+ ...+.++ ..+.+ .+... +... ..-.+.||+|+.+.- + + .+..+.+.|++
T Consensus 141 ~g~~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~-D~~~----~~~~~~fD~I~~~~vl~~l~~~~~~~~l~~~~~~Lkp 215 (287)
T PRK12335 141 LGFDVTAVDINQQSLENLQEIAEKENLNIRTGLY-DINS----ASIQEEYDFILSTVVLMFLNRERIPAIIKNMQEHTNP 215 (287)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEe-chhc----ccccCCccEEEEcchhhhCCHHHHHHHHHHHHHhcCC
Confidence 48899999954 4444443 23322 11111 1110 111456999987642 1 1 26678889999
Q ss_pred CcEEEEe
Q 048785 195 NGKVIDL 201 (280)
Q Consensus 195 ~g~~v~~ 201 (280)
+|.++.+
T Consensus 216 gG~~l~v 222 (287)
T PRK12335 216 GGYNLIV 222 (287)
T ss_pred CcEEEEE
Confidence 9986543
No 221
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=28.82 E-value=1.1e+02 Score=25.42 Aligned_cols=70 Identities=17% Similarity=0.145 Sum_probs=41.4
Q ss_pred hhhhCCCEEEEEec-C-Cc--HHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEE
Q 048785 126 LAKLGNSHVTATCG-A-RN--IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVID 200 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~-~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~ 200 (280)
+.+..+.++.+++. + ++ .+.++++|....... . ...+. ...+|+||+|+++.. .+.+..++..|-++++
T Consensus 20 ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~--~-e~ll~---~~dIDaV~iaTp~~~H~e~a~~al~aGk~VId 93 (285)
T TIGR03215 20 LLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEG--V-DGLLA---NPDIDIVFDATSAKAHARHARLLAELGKIVID 93 (285)
T ss_pred HHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECC--H-HHHhc---CCCCCEEEECCCcHHHHHHHHHHHHcCCEEEE
Confidence 33444678888874 2 33 466777886544321 1 11111 236999999999865 5566666666666654
Q ss_pred e
Q 048785 201 L 201 (280)
Q Consensus 201 ~ 201 (280)
.
T Consensus 94 e 94 (285)
T TIGR03215 94 L 94 (285)
T ss_pred C
Confidence 4
No 222
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=28.50 E-value=83 Score=21.55 Aligned_cols=54 Identities=20% Similarity=0.195 Sum_probs=34.6
Q ss_pred CCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC
Q 048785 130 GNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP 184 (280)
Q Consensus 130 ~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~ 184 (280)
.+.+|+.++.+ ++.+.+++.|.. ++..+..+...++..+-..++.++-+++++.
T Consensus 20 ~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 20 GGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp TTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHH
T ss_pred CCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHH
Confidence 45689999976 677888877744 5544444444444444456888887777654
No 223
>COG4091 Predicted homoserine dehydrogenase [Amino acid transport and metabolism]
Probab=28.44 E-value=1.4e+02 Score=25.89 Aligned_cols=78 Identities=4% Similarity=-0.107 Sum_probs=45.9
Q ss_pred CCcccEEEECCCCCC--cccccccccCCcEEEEeCCCchhhHHHHHhhhhc-cceeeEEEEEcCCHHHHHHHHHHHHCCC
Q 048785 170 GRKYDAVIHCARGIP--WSTFEPNLAENGKVIDLTPTPSAMLTFAWQKLTF-SKKQLVPLLVIPKGENLVFLVKLLKEGK 246 (280)
Q Consensus 170 ~~~~d~v~d~~g~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~g~ 246 (280)
...+|+|||++|.+. .+..+..+..+-++|.+......+.....+...- .+..+.+.. ........+++++.+.--
T Consensus 99 ~~~IdvIIdATG~p~vGA~~~l~Ai~h~KHlVMmNVEaDvtIGp~Lk~~Ad~~GviyS~~~-GDeP~~~mEL~efa~a~G 177 (438)
T COG4091 99 NDLIDVIIDATGVPEVGAKIALEAILHGKHLVMMNVEADVTIGPILKQQADAAGVIYSGGA-GDEPSSCMELYEFASALG 177 (438)
T ss_pred CCcceEEEEcCCCcchhhHhHHHHHhcCCeEEEEEeeeceeecHHHHHHHhhcCeEEeccC-CCCcHHHHHHHHHHHhcC
Confidence 456899999999877 6688889999999987753222222222222221 222222221 334556667777777655
Q ss_pred ee
Q 048785 247 IK 248 (280)
Q Consensus 247 ~~ 248 (280)
+.
T Consensus 178 ~e 179 (438)
T COG4091 178 FE 179 (438)
T ss_pred Ce
Confidence 44
No 224
>TIGR03855 NAD_NadX aspartate dehydrogenase. Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.
Probab=27.86 E-value=1.6e+02 Score=23.55 Aligned_cols=64 Identities=16% Similarity=0.197 Sum_probs=39.1
Q ss_pred CCEEEEEecC--CcH-HHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEeC
Q 048785 131 NSHVTATCGA--RNI-EFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 131 G~~Vi~~~~~--~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g 202 (280)
|+++++++.. ++. ++++++|.. ++. + .+.+. . ..+|+|++|++... .+.+.++|+.|-.++...
T Consensus 1 ~~eLvaV~D~~~e~a~~~a~~~g~~-~~~--d--~~eLl--~-~~vDaVviatp~~~H~e~a~~aL~aGkhVl~~s 68 (229)
T TIGR03855 1 NFEIAAVYDRNPKDAKELAERCGAK-IVS--D--FDEFL--P-EDVDIVVEAASQEAVKEYAEKILKNGKDLLIMS 68 (229)
T ss_pred CeEEEEEECCCHHHHHHHHHHhCCc-eEC--C--HHHHh--c-CCCCEEEECCChHHHHHHHHHHHHCCCCEEEEC
Confidence 3567777743 443 344566643 221 1 11111 1 34999999999865 778888888887776654
No 225
>PF11132 SplA: Transcriptional regulator protein (SplA); InterPro: IPR022608 The SplA protein functions in trans as a negative regulator of the level of splB-lacZ expression in the developing forespore [].
Probab=27.44 E-value=1e+02 Score=19.64 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=19.8
Q ss_pred CCCCCCCEEEEeecCCCCCcceeEEeecccccccCCC
Q 048785 63 KNFKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPL 99 (280)
Q Consensus 63 ~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~~p~ 99 (280)
+.+++||.|.+++- +---++...+.+..++.-|+
T Consensus 4 ~~~~~GD~VyViYr---NPHt~~VanIqeAeiV~hP~ 37 (75)
T PF11132_consen 4 KPYHAGDIVYVIYR---NPHTQDVANIQEAEIVPHPE 37 (75)
T ss_pred cccCCCCEEEEEEc---CCCCccccccchhheeCCCC
Confidence 45899999988752 21123334444555555554
No 226
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=27.32 E-value=1.4e+02 Score=22.29 Aligned_cols=23 Identities=4% Similarity=-0.012 Sum_probs=16.8
Q ss_pred CcccEEEECCCCCCccccccccc
Q 048785 171 RKYDAVIHCARGIPWSTFEPNLA 193 (280)
Q Consensus 171 ~~~d~v~d~~g~~~~~~~~~~l~ 193 (280)
.++|+|+-+++++..+..+...+
T Consensus 69 ~~a~lViaaT~d~e~N~~i~~~a 91 (157)
T PRK06719 69 KDAHLIYAATNQHAVNMMVKQAA 91 (157)
T ss_pred CCceEEEECCCCHHHHHHHHHHH
Confidence 45899999999887665555444
No 227
>PRK08317 hypothetical protein; Provisional
Probab=27.28 E-value=98 Score=24.26 Aligned_cols=68 Identities=18% Similarity=0.187 Sum_probs=37.5
Q ss_pred CCEEEEEec-CCcHHHHHhc----CCC-eeecCCCCCcccccCCCCCcccEEEECCC-----CC--CcccccccccCCcE
Q 048785 131 NSHVTATCG-ARNIEFVKSL----GAD-EVLDYKTPDGAALKSPSGRKYDAVIHCAR-----GI--PWSTFEPNLAENGK 197 (280)
Q Consensus 131 G~~Vi~~~~-~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-----~~--~~~~~~~~l~~~g~ 197 (280)
+.++++++. +...+.+++. +.. .+...+... .. .....||+|+.... .. .+..+.++|+++|.
T Consensus 44 ~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~---~~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~ 119 (241)
T PRK08317 44 EGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG---LP-FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGR 119 (241)
T ss_pred CcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc---CC-CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcE
Confidence 358999995 4555555443 111 111111111 11 12356898886432 21 26788899999999
Q ss_pred EEEeC
Q 048785 198 VIDLT 202 (280)
Q Consensus 198 ~v~~g 202 (280)
++...
T Consensus 120 l~~~~ 124 (241)
T PRK08317 120 VVVLD 124 (241)
T ss_pred EEEEe
Confidence 88654
No 228
>COG3602 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.04 E-value=30 Score=24.11 Aligned_cols=45 Identities=24% Similarity=0.245 Sum_probs=26.5
Q ss_pred CCCCCEEEEeecCCCCCcceeEEeecccccccCCCCC------ChhhhcccchhH
Q 048785 65 FKAGYNVVAILNHFSGGGLAEFAMVKESLTASRPLEV------SAAEGAGLPLAG 113 (280)
Q Consensus 65 ~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~------~~~~aa~~~~~~ 113 (280)
+-.||+|++.. ..|..+.+ ...+-..++-++++ +.++++.++..+
T Consensus 18 L~~G~yVfcT~---~~ga~~~~-~lePla~FRE~EG~tLiler~~AeaaGl~~~~ 68 (134)
T COG3602 18 LLDGDYVFCTV---APGALQPK-NLEPLATFREREGLTLILERDAAEAAGLSYSA 68 (134)
T ss_pred ccCCceEEEEe---cCCcCCCc-CCChHhhhccccCcEEEEehhhHHhcCCCccc
Confidence 77899998875 34555554 44444556666654 345555554443
No 229
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=26.71 E-value=1.8e+02 Score=25.04 Aligned_cols=79 Identities=22% Similarity=0.128 Sum_probs=48.9
Q ss_pred hhhhCCCEEEEEecC--Cc----HHHHHhcCCCeeecCCCCC---------cccccCCCCCcccEEEECCCCCC----cc
Q 048785 126 LAKLGNSHVTATCGA--RN----IEFVKSLGADEVLDYKTPD---------GAALKSPSGRKYDAVIHCARGIP----WS 186 (280)
Q Consensus 126 la~~~G~~Vi~~~~~--~~----~~~~~~~g~~~v~~~~~~~---------~~~~~~~~~~~~d~v~d~~g~~~----~~ 186 (280)
-.+.+|++|+.+... +. .+++++-|...+-.++++. .++++.... .+|.||-++|+-- +.
T Consensus 115 a~r~~GaeVil~g~~~dda~~~a~~~a~~~G~~~i~pfD~p~viAGQGTi~lEileq~~~-~~d~v~vpvGGGGLisGia 193 (347)
T COG1171 115 ATRGYGAEVILHGDNFDDAYAAAEELAEEEGLTFVPPFDDPDVIAGQGTIALEILEQLPD-LPDAVFVPVGGGGLISGIA 193 (347)
T ss_pred HHHhcCCEEEEECCCHHHHHHHHHHHHHHcCCEEeCCCCCcceeecccHHHHHHHHhccc-cCCEEEEecCccHHHHHHH
Confidence 556788888888854 22 3344566766555555543 122232222 2699999999743 55
Q ss_pred cccccccCCcEEEEeCCCc
Q 048785 187 TFEPNLAENGKVIDLTPTP 205 (280)
Q Consensus 187 ~~~~~l~~~g~~v~~g~~~ 205 (280)
..++.+.|.-+++-+.+..
T Consensus 194 ~~~k~~~p~~~vIGVEp~~ 212 (347)
T COG1171 194 TALKALSPEIKVIGVEPEG 212 (347)
T ss_pred HHHHHhCCCCeEEEEeeCC
Confidence 6777788888887776444
No 230
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=26.36 E-value=48 Score=24.53 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=22.7
Q ss_pred CcccEEEECCCCCC-cccccccccCCcEEEEeCCCc
Q 048785 171 RKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTPTP 205 (280)
Q Consensus 171 ~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~ 205 (280)
.++|+|+||+|.-. -+.+...+..+.+-|.++.+.
T Consensus 86 ~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~ 121 (149)
T smart00846 86 LGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA 121 (149)
T ss_pred cCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence 47899999998633 344556676666555555443
No 231
>PLN03075 nicotianamine synthase; Provisional
Probab=26.05 E-value=76 Score=26.59 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=39.4
Q ss_pred CCEEEEEecC-CcHHHHHhc-----CCCeeecCCCCCcccccCC-CCCcccEEEECCC------CC--CcccccccccCC
Q 048785 131 NSHVTATCGA-RNIEFVKSL-----GADEVLDYKTPDGAALKSP-SGRKYDAVIHCAR------GI--PWSTFEPNLAEN 195 (280)
Q Consensus 131 G~~Vi~~~~~-~~~~~~~~~-----g~~~v~~~~~~~~~~~~~~-~~~~~d~v~d~~g------~~--~~~~~~~~l~~~ 195 (280)
+.++++++.+ +..+.+++. |...-+..... ++.... ..++||+||..+- .+ .++.+.+.|++|
T Consensus 149 ~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~--Da~~~~~~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG 226 (296)
T PLN03075 149 TTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA--DVMDVTESLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPG 226 (296)
T ss_pred CCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC--chhhcccccCCcCEEEEecccccccccHHHHHHHHHHhcCCC
Confidence 4589999954 555555432 21111111111 111111 2356999998851 11 178899999999
Q ss_pred cEEEEeC
Q 048785 196 GKVIDLT 202 (280)
Q Consensus 196 g~~v~~g 202 (280)
|.++.-.
T Consensus 227 G~Lvlr~ 233 (296)
T PLN03075 227 ALLMLRS 233 (296)
T ss_pred cEEEEec
Confidence 9988543
No 232
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=25.12 E-value=97 Score=20.38 Aligned_cols=24 Identities=29% Similarity=0.535 Sum_probs=14.1
Q ss_pred CCCCCCEEEEeecCCCCCcceeEEeeccc
Q 048785 64 NFKAGYNVVAILNHFSGGGLAEFAMVKES 92 (280)
Q Consensus 64 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~ 92 (280)
++++||+|+.. .|-+.....++.+
T Consensus 37 ~L~~Gd~VvT~-----gGi~G~V~~i~d~ 60 (84)
T TIGR00739 37 SLKKGDKVLTI-----GGIIGTVTKIAEN 60 (84)
T ss_pred hCCCCCEEEEC-----CCeEEEEEEEeCC
Confidence 47778887753 3445555555543
No 233
>PF02153 PDH: Prephenate dehydrogenase; InterPro: IPR003099 Members of this family are prephenate dehydrogenases 1.3.1.12 from EC involved in tyrosine biosynthesis. ; GO: 0004665 prephenate dehydrogenase (NADP+) activity, 0008977 prephenate dehydrogenase activity, 0006571 tyrosine biosynthetic process, 0055114 oxidation-reduction process; PDB: 2F1K_B 2PV7_A 3DZB_B 3KTD_B 3B1F_A 2G5C_D 3GGP_C 3GGG_C 3GGO_D.
Probab=24.48 E-value=2.7e+02 Score=22.64 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=39.0
Q ss_pred hCC--CEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC----cccccccccCCcEEEEe
Q 048785 129 LGN--SHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP----WSTFEPNLAENGKVIDL 201 (280)
Q Consensus 129 ~~G--~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~~l~~~g~~v~~ 201 (280)
..| .+|++.+.+ +..+.+.++|...-...+ .+.. ..+|+|+-|+.-.. ++.....+++++.+.++
T Consensus 7 ~~g~~~~v~g~d~~~~~~~~a~~~g~~~~~~~~---~~~~-----~~~DlvvlavP~~~~~~~l~~~~~~~~~~~iv~Dv 78 (258)
T PF02153_consen 7 KAGPDVEVYGYDRDPETLEAALELGIIDEASTD---IEAV-----EDADLVVLAVPVSAIEDVLEEIAPYLKPGAIVTDV 78 (258)
T ss_dssp HTTTTSEEEEE-SSHHHHHHHHHTTSSSEEESH---HHHG-----GCCSEEEE-S-HHHHHHHHHHHHCGS-TTSEEEE-
T ss_pred hCCCCeEEEEEeCCHHHHHHHHHCCCeeeccCC---HhHh-----cCCCEEEEcCCHHHHHHHHHHhhhhcCCCcEEEEe
Confidence 345 699999965 677777788854332111 1111 23689998887543 44555566778888888
Q ss_pred CCCchhh
Q 048785 202 TPTPSAM 208 (280)
Q Consensus 202 g~~~~~~ 208 (280)
++.....
T Consensus 79 ~SvK~~~ 85 (258)
T PF02153_consen 79 GSVKAPI 85 (258)
T ss_dssp -S-CHHH
T ss_pred CCCCHHH
Confidence 7554433
No 234
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=24.42 E-value=68 Score=26.06 Aligned_cols=75 Identities=13% Similarity=0.048 Sum_probs=42.2
Q ss_pred hhhhC--CCEEEEEecC-CcHHHH----HhcCCCeeecCCCCC-cccccC---C--CCCcccEEEECCCCCC----cccc
Q 048785 126 LAKLG--NSHVTATCGA-RNIEFV----KSLGADEVLDYKTPD-GAALKS---P--SGRKYDAVIHCARGIP----WSTF 188 (280)
Q Consensus 126 la~~~--G~~Vi~~~~~-~~~~~~----~~~g~~~v~~~~~~~-~~~~~~---~--~~~~~d~v~d~~g~~~----~~~~ 188 (280)
+|+.+ +.+|+++..+ +..+.+ ++.|...-+.....+ .+.+.. . ..+.||+||--..-.. ++.+
T Consensus 97 la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~ 176 (247)
T PLN02589 97 TALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDGKYHGTFDFIFVDADKDNYINYHKRL 176 (247)
T ss_pred HHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhccccCCcccEEEecCCHHHhHHHHHHH
Confidence 55555 4589988854 444444 455633222221111 111111 1 1257999986555322 7788
Q ss_pred cccccCCcEEEE
Q 048785 189 EPNLAENGKVID 200 (280)
Q Consensus 189 ~~~l~~~g~~v~ 200 (280)
+++|++||.++.
T Consensus 177 l~ll~~GGviv~ 188 (247)
T PLN02589 177 IDLVKVGGVIGY 188 (247)
T ss_pred HHhcCCCeEEEE
Confidence 999999999873
No 235
>PHA00520 packaging NTPase P4
Probab=24.42 E-value=2.4e+02 Score=23.73 Aligned_cols=33 Identities=30% Similarity=0.239 Sum_probs=24.9
Q ss_pred HHHHHHHHhhhhhhhhCCCEEEEEecC----CcHHHH
Q 048785 114 LTALEALTQSAGLAKLGNSHVTATCGA----RNIEFV 146 (280)
Q Consensus 114 ~~a~~~l~~~~~la~~~G~~Vi~~~~~----~~~~~~ 146 (280)
-.+|..|.+..++|..+||.||.+..| +|.+.+
T Consensus 210 r~~~~~LTdl~~iaas~gc~vV~~lNP~S~DeKIe~v 246 (330)
T PHA00520 210 RGAYGLLTDLGNIAASRGCRVVATLNPMSDDEKIEAV 246 (330)
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEcCCCCccHhHHHH
Confidence 367777777777999999999998843 466655
No 236
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=24.35 E-value=89 Score=25.41 Aligned_cols=74 Identities=15% Similarity=0.155 Sum_probs=42.6
Q ss_pred CEEEEEe-cCCcHHHH----HhcCCCe--eecCCCCCcccccCCCCCcccEEEECCCCC--Ccccccccc-cCCcEEEEe
Q 048785 132 SHVTATC-GARNIEFV----KSLGADE--VLDYKTPDGAALKSPSGRKYDAVIHCARGI--PWSTFEPNL-AENGKVIDL 201 (280)
Q Consensus 132 ~~Vi~~~-~~~~~~~~----~~~g~~~--v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l-~~~g~~v~~ 201 (280)
.+|+... ++++.+.+ +..|... .+..++....-........+|.||=-...+ .++.+.+.| +++|+++.+
T Consensus 66 G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~f 145 (247)
T PF08704_consen 66 GHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCF 145 (247)
T ss_dssp SEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEE
T ss_pred eEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 4999998 44555544 3455431 122222211111111134688888666654 388899999 899999988
Q ss_pred CCCc
Q 048785 202 TPTP 205 (280)
Q Consensus 202 g~~~ 205 (280)
.+.-
T Consensus 146 sP~i 149 (247)
T PF08704_consen 146 SPCI 149 (247)
T ss_dssp ESSH
T ss_pred CCCH
Confidence 7554
No 237
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=23.83 E-value=1.3e+02 Score=26.79 Aligned_cols=16 Identities=13% Similarity=0.237 Sum_probs=11.1
Q ss_pred cccccccccCCcEEEE
Q 048785 185 WSTFEPNLAENGKVID 200 (280)
Q Consensus 185 ~~~~~~~l~~~g~~v~ 200 (280)
+..+.+.|++||+++.
T Consensus 362 L~~a~~~LkpGG~lvy 377 (444)
T PRK14902 362 LESVAQYLKKGGILVY 377 (444)
T ss_pred HHHHHHHcCCCCEEEE
Confidence 4456677888888773
No 238
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=23.49 E-value=77 Score=28.06 Aligned_cols=26 Identities=12% Similarity=0.173 Sum_probs=21.2
Q ss_pred ccccccceEEEEEeCCCCCCCCCCCE
Q 048785 45 YIPATDVAGEIIEVGSEVKNFKAGYN 70 (280)
Q Consensus 45 ~~~G~e~~G~V~~vG~~v~~~~~Gd~ 70 (280)
..-|+|+++.+.+|++..++.-+|..
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~ 115 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEP 115 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCCh
Confidence 34699999999999999887666655
No 239
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=23.46 E-value=78 Score=24.99 Aligned_cols=33 Identities=18% Similarity=0.080 Sum_probs=22.9
Q ss_pred CCcccEEEECCCC---C----CcccccccccCCcEEEEeC
Q 048785 170 GRKYDAVIHCARG---I----PWSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 170 ~~~~d~v~d~~g~---~----~~~~~~~~l~~~g~~v~~g 202 (280)
.+.+|+|+-+..- + .+..+.+.|+++|+++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 151 (231)
T TIGR02752 112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLE 151 (231)
T ss_pred CCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEE
Confidence 4569998864331 1 1556788999999998664
No 240
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes.
Probab=23.13 E-value=73 Score=25.02 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=22.5
Q ss_pred CcccEEEEC-----CCC--CCcccccccccCCcEEEEeC
Q 048785 171 RKYDAVIHC-----ARG--IPWSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 171 ~~~d~v~d~-----~g~--~~~~~~~~~l~~~g~~v~~g 202 (280)
+.||+|+.. +.. ..++.+.+.|+|+|+++...
T Consensus 66 ~~fD~I~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 104 (224)
T smart00828 66 DTYDLVFGFEVIHHIKDKMDLFSNISRHLKDGGHLVLAD 104 (224)
T ss_pred CCCCEeehHHHHHhCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 369998842 222 12677888999999988654
No 241
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=23.02 E-value=1.9e+02 Score=22.38 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=23.3
Q ss_pred CCcccEEEECCCCC-------CcccccccccCCcEEEEeC
Q 048785 170 GRKYDAVIHCARGI-------PWSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 170 ~~~~d~v~d~~g~~-------~~~~~~~~l~~~g~~v~~g 202 (280)
.+.+|+++.+.+-. .++.+.+.|+++|+++..+
T Consensus 104 ~~~~D~i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 143 (223)
T TIGR01934 104 DNSFDAVTIAFGLRNVTDIQKALREMYRVLKPGGRLVILE 143 (223)
T ss_pred CCcEEEEEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEE
Confidence 34699987644321 1667788999999998765
No 242
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=22.94 E-value=2e+02 Score=21.31 Aligned_cols=86 Identities=20% Similarity=0.205 Sum_probs=46.4
Q ss_pred CCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-----ccc--ccccccCCcEEEEe
Q 048785 130 GNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-----WST--FEPNLAENGKVIDL 201 (280)
Q Consensus 130 ~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-----~~~--~~~~l~~~g~~v~~ 201 (280)
.|.+|++.+++ ++.+.+.+.|+... + +. .+.. ...|+||-|+.+.. +.. +...+.++..++.+
T Consensus 23 ~g~~v~~~d~~~~~~~~~~~~g~~~~-~--s~-~e~~-----~~~dvvi~~v~~~~~v~~v~~~~~i~~~l~~g~iiid~ 93 (163)
T PF03446_consen 23 AGYEVTVYDRSPEKAEALAEAGAEVA-D--SP-AEAA-----EQADVVILCVPDDDAVEAVLFGENILAGLRPGKIIIDM 93 (163)
T ss_dssp TTTEEEEEESSHHHHHHHHHTTEEEE-S--SH-HHHH-----HHBSEEEE-SSSHHHHHHHHHCTTHGGGS-TTEEEEE-
T ss_pred cCCeEEeeccchhhhhhhHHhhhhhh-h--hh-hhHh-----hcccceEeecccchhhhhhhhhhHHhhccccceEEEec
Confidence 58899988854 67777766664322 1 11 1111 12589999988733 333 56677788888888
Q ss_pred CCCchhhHHHHHhhhhccceeeE
Q 048785 202 TPTPSAMLTFAWQKLTFSKKQLV 224 (280)
Q Consensus 202 g~~~~~~~~~~~~~~~~~~~~~~ 224 (280)
+..+.....-....+.-++..+.
T Consensus 94 sT~~p~~~~~~~~~~~~~g~~~v 116 (163)
T PF03446_consen 94 STISPETSRELAERLAAKGVRYV 116 (163)
T ss_dssp SS--HHHHHHHHHHHHHTTEEEE
T ss_pred CCcchhhhhhhhhhhhhccceee
Confidence 75554444444444444444443
No 243
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=22.92 E-value=68 Score=27.24 Aligned_cols=72 Identities=19% Similarity=0.256 Sum_probs=39.3
Q ss_pred CCCEEEEEecC-CcHHHHHhc----CCCeeecCCCCCcccccCCCCCcccEEEECCC-----CC--CcccccccccCCcE
Q 048785 130 GNSHVTATCGA-RNIEFVKSL----GADEVLDYKTPDGAALKSPSGRKYDAVIHCAR-----GI--PWSTFEPNLAENGK 197 (280)
Q Consensus 130 ~G~~Vi~~~~~-~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-----~~--~~~~~~~~l~~~g~ 197 (280)
.|++|++++.+ +..+.++.. +...-+.+...+.+.+. ...+.||+|+..-. ++ .+..+.++|+|+|+
T Consensus 152 ~g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~-~~~~~FD~Vi~~~vLeHv~d~~~~L~~l~r~LkPGG~ 230 (322)
T PLN02396 152 MGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLA-DEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGA 230 (322)
T ss_pred cCCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhh-hccCCCCEEEEhhHHHhcCCHHHHHHHHHHHcCCCcE
Confidence 58899999954 555555422 11000111111111111 12356999986332 21 26778889999999
Q ss_pred EEEeC
Q 048785 198 VIDLT 202 (280)
Q Consensus 198 ~v~~g 202 (280)
++..-
T Consensus 231 liist 235 (322)
T PLN02396 231 TVLST 235 (322)
T ss_pred EEEEE
Confidence 88653
No 244
>COG0081 RplA Ribosomal protein L1 [Translation, ribosomal structure and biogenesis]
Probab=22.48 E-value=52 Score=26.25 Aligned_cols=46 Identities=22% Similarity=0.234 Sum_probs=30.2
Q ss_pred EEEEEecCCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECC
Q 048785 133 HVTATCGARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCA 180 (280)
Q Consensus 133 ~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~ 180 (280)
+|.+.+..++.+.+++.|++.|.. ++. .+..+......||.+|-+-
T Consensus 74 rV~Vfa~g~~~~~A~~AGad~Vg~-edl-~e~ik~~r~~~fD~~IAtp 119 (228)
T COG0081 74 RVAVFADGEKAEEAKAAGADYVGG-EDL-IELIKNGRAKDFDVFIATP 119 (228)
T ss_pred EEEEEcChHhHHHHHHcCCCEecH-HHH-HHHHhCcchhcCCEEEECc
Confidence 777777778899999999998876 221 1222211135689988554
No 245
>PRK05785 hypothetical protein; Provisional
Probab=22.44 E-value=2.7e+02 Score=22.11 Aligned_cols=74 Identities=14% Similarity=0.019 Sum_probs=38.5
Q ss_pred hhhhCCCEEEEEec-CCcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC-------CcccccccccCCcE
Q 048785 126 LAKLGNSHVTATCG-ARNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI-------PWSTFEPNLAENGK 197 (280)
Q Consensus 126 la~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-------~~~~~~~~l~~~g~ 197 (280)
+++..+.+|++++- ++-.+.+++.. .. +..+. ..+ ....+.||+|+...+-. .+..+.+.+++..-
T Consensus 69 l~~~~~~~v~gvD~S~~Ml~~a~~~~-~~-~~~d~---~~l-p~~d~sfD~v~~~~~l~~~~d~~~~l~e~~RvLkp~~~ 142 (226)
T PRK05785 69 FKKVFKYYVVALDYAENMLKMNLVAD-DK-VVGSF---EAL-PFRDKSFDVVMSSFALHASDNIEKVIAEFTRVSRKQVG 142 (226)
T ss_pred HHHhcCCEEEEECCCHHHHHHHHhcc-ce-EEech---hhC-CCCCCCEEEEEecChhhccCCHHHHHHHHHHHhcCceE
Confidence 33333679999994 44455554321 11 11111 111 12345699999866521 15567777888544
Q ss_pred EEEeCCCc
Q 048785 198 VIDLTPTP 205 (280)
Q Consensus 198 ~v~~g~~~ 205 (280)
++.++.+.
T Consensus 143 ile~~~p~ 150 (226)
T PRK05785 143 FIAMGKPD 150 (226)
T ss_pred EEEeCCCC
Confidence 55555443
No 246
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=22.22 E-value=1.1e+02 Score=26.22 Aligned_cols=73 Identities=14% Similarity=0.034 Sum_probs=39.6
Q ss_pred hhhhC-CCEEEEEecC-CcHHHHHhcCC-C--eeecCCCCCcccccCCCCCcccEEEECCCC-------CCccccccccc
Q 048785 126 LAKLG-NSHVTATCGA-RNIEFVKSLGA-D--EVLDYKTPDGAALKSPSGRKYDAVIHCARG-------IPWSTFEPNLA 193 (280)
Q Consensus 126 la~~~-G~~Vi~~~~~-~~~~~~~~~g~-~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-------~~~~~~~~~l~ 193 (280)
+++.. +.+|++++-+ +-.+.+++... . .++.. +...+ ....+.||+|+.+-.- ..++.+.+.|+
T Consensus 131 La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~g---D~e~l-p~~~~sFDvVIs~~~L~~~~d~~~~L~e~~rvLk 206 (340)
T PLN02490 131 IVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEG---DAEDL-PFPTDYADRYVSAGSIEYWPDPQRGIKEAYRVLK 206 (340)
T ss_pred HHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEec---cHHhC-CCCCCceeEEEEcChhhhCCCHHHHHHHHHHhcC
Confidence 44444 3589999844 44455544321 1 11111 11111 1123469988874321 12667889999
Q ss_pred CCcEEEEeC
Q 048785 194 ENGKVIDLT 202 (280)
Q Consensus 194 ~~g~~v~~g 202 (280)
++|+++..+
T Consensus 207 PGG~LvIi~ 215 (340)
T PLN02490 207 IGGKACLIG 215 (340)
T ss_pred CCcEEEEEE
Confidence 999988765
No 247
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=21.86 E-value=47 Score=26.11 Aligned_cols=75 Identities=19% Similarity=0.209 Sum_probs=42.7
Q ss_pred hhhhC--CCEEEEEecC-CcHHHH----HhcCCCe---eecCCCCC--cccccCCCCCcccEEEECCCCCC----ccccc
Q 048785 126 LAKLG--NSHVTATCGA-RNIEFV----KSLGADE---VLDYKTPD--GAALKSPSGRKYDAVIHCARGIP----WSTFE 189 (280)
Q Consensus 126 la~~~--G~~Vi~~~~~-~~~~~~----~~~g~~~---v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~----~~~~~ 189 (280)
+|+.+ +.+|+++..+ ++.+.+ ++.|... ++..+... .........+.||.||--..-.. +..++
T Consensus 63 la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~ 142 (205)
T PF01596_consen 63 LAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEGQFDFVFIDADKRNYLEYFEKAL 142 (205)
T ss_dssp HHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTTSEEEEEEESTGGGHHHHHHHHH
T ss_pred HHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCCceeEEEEcccccchhhHHHHHh
Confidence 66665 5699999965 555554 4456432 22221111 11111112347998886554322 67788
Q ss_pred ccccCCcEEEE
Q 048785 190 PNLAENGKVID 200 (280)
Q Consensus 190 ~~l~~~g~~v~ 200 (280)
++|+++|.++.
T Consensus 143 ~ll~~ggvii~ 153 (205)
T PF01596_consen 143 PLLRPGGVIIA 153 (205)
T ss_dssp HHEEEEEEEEE
T ss_pred hhccCCeEEEE
Confidence 99999999875
No 248
>PRK08177 short chain dehydrogenase; Provisional
Probab=21.83 E-value=1.8e+02 Score=22.60 Aligned_cols=53 Identities=21% Similarity=0.244 Sum_probs=29.1
Q ss_pred CCCEEEEEecC-CcHHHHHhcCCCeee--cCCCCC--cccccCCCCCcccEEEECCCC
Q 048785 130 GNSHVTATCGA-RNIEFVKSLGADEVL--DYKTPD--GAALKSPSGRKYDAVIHCARG 182 (280)
Q Consensus 130 ~G~~Vi~~~~~-~~~~~~~~~g~~~v~--~~~~~~--~~~~~~~~~~~~d~v~d~~g~ 182 (280)
.|++|++++++ ++.+.+++.+....+ |-.+.. ....+...++++|++|.+.|.
T Consensus 24 ~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 24 RGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 58999999964 555555444332222 222221 112222333479999999874
No 249
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=21.67 E-value=97 Score=26.07 Aligned_cols=73 Identities=16% Similarity=0.120 Sum_probs=41.4
Q ss_pred hhhCCCEEEEEec-C-C--cHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEe
Q 048785 127 AKLGNSHVTATCG-A-R--NIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDL 201 (280)
Q Consensus 127 a~~~G~~Vi~~~~-~-~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~ 201 (280)
.+.-+.++.++++ + + ..++++++|.....+ +. ...+....-..+|+||++++... .+.+..++..|-++++.
T Consensus 24 ~~~~~velvAVvdid~es~gla~A~~~Gi~~~~~--~i-e~LL~~~~~~dIDiVf~AT~a~~H~e~a~~a~eaGk~VID~ 100 (302)
T PRK08300 24 LRSEHLEPGAMVGIDPESDGLARARRLGVATSAE--GI-DGLLAMPEFDDIDIVFDATSAGAHVRHAAKLREAGIRAIDL 100 (302)
T ss_pred hcCCCcEEEEEEeCChhhHHHHHHHHcCCCcccC--CH-HHHHhCcCCCCCCEEEECCCHHHHHHHHHHHHHcCCeEEEC
Confidence 3344678888884 2 3 235667787543221 11 12222111246999999999765 55555666666666655
Q ss_pred C
Q 048785 202 T 202 (280)
Q Consensus 202 g 202 (280)
.
T Consensus 101 s 101 (302)
T PRK08300 101 T 101 (302)
T ss_pred C
Confidence 4
No 250
>PRK07402 precorrin-6B methylase; Provisional
Probab=21.57 E-value=1.6e+02 Score=22.65 Aligned_cols=18 Identities=11% Similarity=0.206 Sum_probs=14.8
Q ss_pred cccccccccCCcEEEEeC
Q 048785 185 WSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 185 ~~~~~~~l~~~g~~v~~g 202 (280)
++.+.+.|+++|+++...
T Consensus 125 l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 125 LQAVWQYLKPGGRLVATA 142 (196)
T ss_pred HHHHHHhcCCCeEEEEEe
Confidence 677888899999988664
No 251
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=21.42 E-value=60 Score=23.00 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=24.6
Q ss_pred ccccccceEEEEEeCCCCCCCCCCCEEEEe
Q 048785 45 YIPATDVAGEIIEVGSEVKNFKAGYNVVAI 74 (280)
Q Consensus 45 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 74 (280)
.++|-.++|.|---|....-.++||+|+.+
T Consensus 58 vI~g~rGSg~I~lNGAAArl~~~GD~VII~ 87 (126)
T COG0853 58 VIAGERGSGVICLNGAAARLVQVGDLVIIM 87 (126)
T ss_pred EEEccCCCcEEEechHHHhhCCCCCEEEEE
Confidence 477888888888777777778999999876
No 252
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=21.31 E-value=1.1e+02 Score=28.52 Aligned_cols=75 Identities=9% Similarity=0.075 Sum_probs=49.0
Q ss_pred hhhhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCCcc----cccccccCCcEEEE
Q 048785 126 LAKLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIPWS----TFEPNLAENGKVID 200 (280)
Q Consensus 126 la~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~----~~~~~l~~~g~~v~ 200 (280)
.++..|.++++++.+ ++.+.+++.|.. ++..+..+.+.++..+-..+|.++-+++++..+ ...+...|..+++.
T Consensus 418 ~L~~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~~i~~~~r~~~p~~~Iia 496 (601)
T PRK03659 418 LLMANKMRITVLERDISAVNLMRKYGYK-VYYGDATQLELLRAAGAEKAEAIVITCNEPEDTMKIVELCQQHFPHLHILA 496 (601)
T ss_pred HHHhCCCCEEEEECCHHHHHHHHhCCCe-EEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHHHHHHHHHHHCCCCeEEE
Confidence 344567899999965 778888888765 443444444555555666789999999986522 23444566666664
Q ss_pred e
Q 048785 201 L 201 (280)
Q Consensus 201 ~ 201 (280)
-
T Consensus 497 R 497 (601)
T PRK03659 497 R 497 (601)
T ss_pred E
Confidence 3
No 253
>PLN02358 glyceraldehyde-3-phosphate dehydrogenase
Probab=21.27 E-value=77 Score=27.16 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=20.3
Q ss_pred CcccEEEECCCCCC-cccccccccCCcEEEEeC
Q 048785 171 RKYDAVIHCARGIP-WSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 171 ~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g 202 (280)
.++|+||+|+|... -+.+...+..|.+.+.+.
T Consensus 94 ~gvDiVie~tG~~~s~~~a~~hl~aGak~ViiS 126 (338)
T PLN02358 94 AGADFVVESTGVFTDKDKAAAHLKGGAKKVVIS 126 (338)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHCCCEEEEeC
Confidence 47999999999754 334445555555554443
No 254
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=21.26 E-value=1.4e+02 Score=19.56 Aligned_cols=52 Identities=19% Similarity=0.070 Sum_probs=31.0
Q ss_pred hhCCCEEEEEecCCcHHHHHhcCCCe--eecCC-CCCcccccCCCCCcccEEEECCC
Q 048785 128 KLGNSHVTATCGARNIEFVKSLGADE--VLDYK-TPDGAALKSPSGRKYDAVIHCAR 181 (280)
Q Consensus 128 ~~~G~~Vi~~~~~~~~~~~~~~g~~~--v~~~~-~~~~~~~~~~~~~~~d~v~d~~g 181 (280)
..+|+++++|.+. .+++++.|... .+..- +....+.+....+++|+||+...
T Consensus 10 ~~lG~~i~AT~gT--a~~L~~~Gi~~~~~~~ki~~~~~~i~~~i~~g~id~VIn~~~ 64 (90)
T smart00851 10 AELGFELVATGGT--AKFLREAGLPVKTLHPKVHGGILAILDLIKNGEIDLVINTLY 64 (90)
T ss_pred HHCCCEEEEccHH--HHHHHHCCCcceeccCCCCCCCHHHHHHhcCCCeEEEEECCC
Confidence 3469999988753 36666777542 22211 11123444556678999998764
No 255
>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....
Probab=21.08 E-value=43 Score=23.26 Aligned_cols=31 Identities=19% Similarity=0.367 Sum_probs=20.8
Q ss_pred cccEEEECCCCCC-cccccccccCCcEEEEeC
Q 048785 172 KYDAVIHCARGIP-WSTFEPNLAENGKVIDLT 202 (280)
Q Consensus 172 ~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g 202 (280)
..|+++||++.+. .+...++|+.+-++|...
T Consensus 59 ~~dvvVE~t~~~~~~~~~~~~L~~G~~VVt~n 90 (117)
T PF03447_consen 59 DIDVVVECTSSEAVAEYYEKALERGKHVVTAN 90 (117)
T ss_dssp T-SEEEE-SSCHHHHHHHHHHHHTTCEEEES-
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCCeEEEEC
Confidence 5899999977655 445677778888887653
No 256
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=20.88 E-value=5e+02 Score=21.72 Aligned_cols=110 Identities=12% Similarity=0.032 Sum_probs=59.7
Q ss_pred CEEEEEec-C-Cc-HHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCCC-cccccccccCCcEEEEeCCCch-
Q 048785 132 SHVTATCG-A-RN-IEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGIP-WSTFEPNLAENGKVIDLTPTPS- 206 (280)
Q Consensus 132 ~~Vi~~~~-~-~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~~- 206 (280)
..++++++ + ++ .+.++++|....+ .+ .+.+ .....+|+|+-|+.+.. .+.+.++|..|-++. +.-+-.
T Consensus 30 ~~~vav~d~~~~~a~~~a~~~~~~~~~--~~--~~~l--l~~~~iD~V~Iatp~~~H~e~~~~AL~aGkhVl-~EKPla~ 102 (342)
T COG0673 30 LELVAVVDRDPERAEAFAEEFGIAKAY--TD--LEEL--LADPDIDAVYIATPNALHAELALAALEAGKHVL-CEKPLAL 102 (342)
T ss_pred eEEEEEecCCHHHHHHHHHHcCCCccc--CC--HHHH--hcCCCCCEEEEcCCChhhHHHHHHHHhcCCEEE-EcCCCCC
Confidence 57777763 3 44 3455678765222 11 1111 22344999999998754 888888888877764 442211
Q ss_pred --hhHHHHHhhhhccceeeEEEEEcCCHHHHHHHHHHHHCCCee
Q 048785 207 --AMLTFAWQKLTFSKKQLVPLLVIPKGENLVFLVKLLKEGKIK 248 (280)
Q Consensus 207 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~ 248 (280)
....-.....-.++..+.-.+.......++.+-+++++|.+-
T Consensus 103 t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~g~lG 146 (342)
T COG0673 103 TLEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDSGALG 146 (342)
T ss_pred CHHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhcCCcC
Confidence 111111111112233333222222345778888899998764
No 257
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=20.52 E-value=51 Score=26.49 Aligned_cols=73 Identities=16% Similarity=0.168 Sum_probs=39.1
Q ss_pred hhhhCC--CEEEEEe-cCCcHHHHH----hcCCCee--ecCCCCCcccccCCCCCcccEEEECCCCC-------Cccccc
Q 048785 126 LAKLGN--SHVTATC-GARNIEFVK----SLGADEV--LDYKTPDGAALKSPSGRKYDAVIHCARGI-------PWSTFE 189 (280)
Q Consensus 126 la~~~G--~~Vi~~~-~~~~~~~~~----~~g~~~v--~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-------~~~~~~ 189 (280)
+++..+ .+|++++ +++=++.++ ..+...+ +..+. +.+. ...+.||.|..+.|=. .+..+.
T Consensus 65 l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~lp-~~d~sfD~v~~~fglrn~~d~~~~l~E~~ 140 (233)
T PF01209_consen 65 LARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDLP-FPDNSFDAVTCSFGLRNFPDRERALREMY 140 (233)
T ss_dssp HGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB---S-TT-EEEEEEES-GGG-SSHHHHHHHHH
T ss_pred HHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHhc-CCCCceeEEEHHhhHHhhCCHHHHHHHHH
Confidence 455554 4999999 444333332 3333211 11111 1111 2346799999888732 177888
Q ss_pred ccccCCcEEEEeC
Q 048785 190 PNLAENGKVIDLT 202 (280)
Q Consensus 190 ~~l~~~g~~v~~g 202 (280)
+.|+|||+++.+.
T Consensus 141 RVLkPGG~l~ile 153 (233)
T PF01209_consen 141 RVLKPGGRLVILE 153 (233)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHcCCCeEEEEee
Confidence 9999999988775
No 258
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=20.49 E-value=4.6e+02 Score=24.18 Aligned_cols=55 Identities=4% Similarity=-0.083 Sum_probs=33.1
Q ss_pred hhCCCEEEEEecC-CcHHHHHhcCCCeeecCCCCCcccccCCCCCcccEEEECCCCC
Q 048785 128 KLGNSHVTATCGA-RNIEFVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIHCARGI 183 (280)
Q Consensus 128 ~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 183 (280)
+..|.+|++++.+ ++.+.+++.|...+ ..+..+.+.++..+-+.+|.++-+++++
T Consensus 437 ~~~g~~vvvId~d~~~~~~~~~~g~~~i-~GD~~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 437 LAAGIPLVVIETSRTRVDELRERGIRAV-LGNAANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred HHCCCCEEEEECCHHHHHHHHHCCCeEE-EcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence 3457788888865 67777777765533 3333333444444445678777766654
No 259
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.32 E-value=4.9e+02 Score=21.67 Aligned_cols=72 Identities=13% Similarity=0.097 Sum_probs=42.9
Q ss_pred hhCCCEEEEEecCC--cHH---HHHhcCCCe-eecCCCCCcccccCCCCCcccEEEECCCCCCcccccccccCCcEEEEe
Q 048785 128 KLGNSHVTATCGAR--NIE---FVKSLGADE-VLDYKTPDGAALKSPSGRKYDAVIHCARGIPWSTFEPNLAENGKVIDL 201 (280)
Q Consensus 128 ~~~G~~Vi~~~~~~--~~~---~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~ 201 (280)
...|.+|+++.++. -+. ++...|++- +.+.+..+ +.+. -+.+|+++.++|.+.+ ..-+.++++..++++
T Consensus 149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~--L~~~--~~~ADIvI~Avgk~~l-v~~~~vk~GavVIDV 223 (279)
T PRK14178 149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN--LKAE--LRQADILVSAAGKAGF-ITPDMVKPGATVIDV 223 (279)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH--HHHH--HhhCCEEEECCCcccc-cCHHHcCCCcEEEEe
Confidence 34578888888652 223 444567653 33332222 1111 1348999999986653 334457999999999
Q ss_pred CCC
Q 048785 202 TPT 204 (280)
Q Consensus 202 g~~ 204 (280)
|..
T Consensus 224 gi~ 226 (279)
T PRK14178 224 GIN 226 (279)
T ss_pred ecc
Confidence 854
Done!