BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048786
         (862 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224127726|ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1203

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 228/544 (41%), Positives = 317/544 (58%), Gaps = 28/544 (5%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L G   ++EV SSI     L  + L  C++L+SLP  IS L  L  L L
Sbjct: 661  FTGIPNLERLILQGCRRLSEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHL 720

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLK+FP+I  + + L KL LD TSI E+P SI+ L GL  L L +CK L  LPSSI
Sbjct: 721  SGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSI 780

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            NGLKSLKTL+LSGC +LEN+P+  G++E L ELDVSGTAIR P  SIF +KNL+ L F G
Sbjct: 781  NGLKSLKTLHLSGCSELENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFHG 840

Query: 180  CNEPPASAS--WHLHLPFNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            C E   S +  W   L F L+ GK +   +L+LPSL+G+ SLT+L LS+C LGE A+P+D
Sbjct: 841  CAESSRSTTNIWQ-RLMFPLMPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPND 899

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            I  L SL++L L+RN FV+LP SI  L  L+ L +EDCK LQSLP++P NL+  R NGC+
Sbjct: 900  IGYLSSLRQLNLSRNKFVSLPTSIDQLSGLQFLRMEDCKMLQSLPELPSNLEEFRVNGCT 959

Query: 297  SLVTLFGALKLCR---SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
            SL  +  + KLC+    +Y  INC    +    N +  ++LR+    Q   +     S++
Sbjct: 960  SLEKMQFSRKLCQLNYLRYLFINCWRLSESDCWNNMFPTLLRKC--FQGPPNLIESFSVI 1017

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             PGS+IP WF +Q+EGSS++V  P + +  ++ +G+A+C     P      +        
Sbjct: 1018 IPGSEIPTWFSHQSEGSSVSVQTPPHSHENDEWLGYAVCASLGYPDFPPNVF------RS 1071

Query: 414  ELECSMDGSG-EGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPT 472
             ++C  +G G E   IY R K   ++SDHLW L+ P      +F+ + +R  F      T
Sbjct: 1072 PMQCFFNGDGNESESIYVRLKPCEILSDHLWFLYFPSRFK--RFDRH-VRFRFEDNCSQT 1128

Query: 473  WKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHD-------FVGSNMEVAQASG 525
             KV +CG   +Y  +VEE +  T      T   ++E   +        +G   +V +ASG
Sbjct: 1129 -KVIKCGVRLVYQQDVEELNRMTNLYENSTFEGVDECFQESGGALVKRLGHTNDVGEASG 1187

Query: 526  SGSS 529
            S SS
Sbjct: 1188 SVSS 1191



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 81/120 (67%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ + L  C++L  LP  IS L  L  L+LSG SK +EFPEI  ++  L ++ L+ T+I 
Sbjct: 691 LIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIE 750

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI+ L G I  +LKDCK L  LPS+INGL+SL+ ++ SGCS+L+N+ E  G++E L
Sbjct: 751 ELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECL 810



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 15/154 (9%)

Query: 647 CSRLWEEADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     EFP+I        ++  D T I EL  +I+ L GL+ L+L  CK L  LP 
Sbjct: 723 CSKL----KEFPEIEGNKKCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPS 778

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I+ LK L TL+LSG S+    PE     + L E+ + GTAIR  P SI  L    + + 
Sbjct: 779 SINGLKSLKTLHLSGCSELENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSF 838

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
             C   +S  ST N  +  R+M+P    K  N T
Sbjct: 839 HGCA--ESSRSTTNIWQ--RLMFPLMPGKRANST 868



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 94/240 (39%), Gaps = 74/240 (30%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL-SLAI-----ELLFGLVQ 685
           GR+ VR++S  EPG  SRLW   D F     VL   T   E+ S+A+     E + G +Q
Sbjct: 505 GREVVRQESTAEPGRRSRLWASKDVF----HVLGKNTGTEEIESIALDWANPEDVEGTMQ 560

Query: 686 LTLNGCKNLERLPRTISALKYLSTLN---------LSGLSKFREFPEITSSR-------D 729
            T     N     + +S L+ L   N         LS   +F E+    S         +
Sbjct: 561 KTKRSAWNTGVFSK-MSRLRLLRIRNACFDSGPEYLSNELRFLEWRNYPSKYLPSSFQPE 619

Query: 730 QLLEIHLEGTAIR------------------------------GLP-------------- 745
            L+E+HL  + +R                              G+P              
Sbjct: 620 NLVEVHLCYSNLRQLRLGNKILDSLKVIDLSYSEYLIKTPNFTGIPNLERLILQGCRRLS 679

Query: 746 ---ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
              +SI   +  I  NL DC++L SLPS I+GL  L  ++ SGCSKLK   E  G  + L
Sbjct: 680 EVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCL 739


>gi|147802475|emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 206/479 (43%), Positives = 277/479 (57%), Gaps = 47/479 (9%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M+ LS+LYLDGT+I+E+P SI  LTGL LL L+ CK L SLP +I  LK L TL LS 
Sbjct: 621  GNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSA 680

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP+I+ +ME L KL LDGT++ ++  SIE L GL  L L +CKNL  LP SI  
Sbjct: 681  CSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGN 740

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            LKSL+TL +SGC KL+ +P+ LG ++ L +L   GT +R+P SSI L++NL  L F GC 
Sbjct: 741  LKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGC- 799

Query: 182  EPPASASWHLHLPFNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            +  AS SW     F LL  KSS  + L LPSL+G+CSL +LD+SDC L E A+P DI NL
Sbjct: 800  KGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDICNL 859

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
             SL+ L L+RNNF +LPA IS L  L  L L  CK L  +P++P ++  V A  CSSL T
Sbjct: 860  SSLETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNT 919

Query: 301  LFGALKLCRSK-------YTIINCIDSLKLLRKNGLAISMLREYLELQAVSD-------- 345
            +     +C ++       +T+ NC +   L  +N  +  M      +Q V++        
Sbjct: 920  ILTPSSVCNNQPVCRWLVFTLPNCFN---LDAENPCSNDMAIISPRMQIVTNMLQKLQNF 976

Query: 346  -PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGT 404
             P    SI  PGS+IP W   QN GS +T+  P + +  N  +GFA+CCVF     +   
Sbjct: 977  LPDFGFSIFLPGSEIPDWISNQNLGSEVTIELPPHWFESN-FLGFAVCCVFAFEDIAPNG 1035

Query: 405  YLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVV--------------SDHLWLLFLPR 449
                   + +L C +  S E H   FRG  GH++              S H+WL + PR
Sbjct: 1036 C------SSQLLCQLQ-SDESH---FRG-IGHILHSIDCEGNSEDRLKSHHMWLAYKPR 1083



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 95/153 (62%), Gaps = 7/153 (4%)

Query: 657 FPDI---VQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I   +Q LS    DGT I EL  +I  L GL+ L L  CK L+ LP +I  LK L T
Sbjct: 616 FPEIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLET 675

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           L LS  SK   FPEI  + + L ++ L+GTA++ L  SIE L+G +  NL+DCKNL +LP
Sbjct: 676 LILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLP 735

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +I  L+SL  +  SGCSKL+ + E LG ++ L
Sbjct: 736 CSIGNLKSLETLIVSGCSKLQQLPENLGSLQCL 768



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 38/210 (18%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEF------------------------------- 657
           ++ G + VR++ P++PG  SRLW+    +                               
Sbjct: 492 QQMGWEIVRQECPKDPGKWSRLWDYEHIYSVLKKNTVLDNLNTIELSNSQHLIHLPNFSS 551

Query: 658 -PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI--SALKYLSTLNLS 713
            P++ +++ +G T   E+  +IE+L  L+ L L  CK L   PR+I    LKYLS   LS
Sbjct: 552 MPNLERLVLEGCTSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPRSIKLECLKYLS---LS 608

Query: 714 GLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
           G S  + FPEI  +   L E++L+GTAI  LP SI  L+G IL +L++CK LKSLPS+I 
Sbjct: 609 GCSDLKNFPEIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSSIC 668

Query: 774 GLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            L+SL  +  S CSKL++  E +  +E L+
Sbjct: 669 KLKSLETLILSACSKLESFPEIMENMEHLK 698



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 25/204 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M +M+ L  L LDGT++ ++  SIE L GL  L L+ CKNL++LP +I +LK L TL +S
Sbjct: 691 MENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVS 750

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-------- 112
           GCSKL++ P+ + S++ L KL  DGT + + PSSI LL  LE+L    CK L        
Sbjct: 751 GCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSL 810

Query: 113 ---------------VRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSG 156
                          ++LP S++GL SL+ L++S C  +E  VP  +  + SLE L++S 
Sbjct: 811 FSFWLLPRKSSDTIGLQLP-SLSGLCSLRELDISDCNLMEGAVPFDICNLSSLETLNLSR 869

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGC 180
                  + I  +  LR L  + C
Sbjct: 870 NNFFSLPAGISKLSKLRFLSLNHC 893



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 11/128 (8%)

Query: 647 CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I++       +L DGT +++L  +IE L GLV L L  CKNL  LP 
Sbjct: 681 CSKL----ESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPC 736

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL +SG SK ++ PE   S   L+++  +GT +R  P+SI LL    + + 
Sbjct: 737 SIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSF 796

Query: 760 KDCKNLKS 767
             CK L S
Sbjct: 797 GGCKGLAS 804


>gi|359493273|ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 230/575 (40%), Positives = 314/575 (54%), Gaps = 81/575 (14%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             +SM +L  L L+G T+I+E+P SI  LTGL LL L+ CK L SLP +I  LK L TL L
Sbjct: 651  FSSMPNLERLVLEGCTTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLIL 710

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CSKL+ FP+I+ +ME L KL LDGT++ ++  SIE L GL  L L +CKNL  LP SI
Sbjct: 711  SACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSI 770

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSL+TL +SGC KL+ +P+ LG ++ L +L   GT +R+P SSI L++NL  L F G
Sbjct: 771  GNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSFGG 830

Query: 180  CNEPPASASWHLHLPFNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
            C +  AS SW     F LL  KSS  + L LPSL+G+CSL +LD+SDC L E A+P DI 
Sbjct: 831  C-KGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEGAVPFDIC 889

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            NL SL+ L L+RNNF +LPA IS L  L  L L  CK L  +P++P ++  V A  CSSL
Sbjct: 890  NLSSLETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSL 949

Query: 299  VTLFGALKLCRSK-------YTIINCIDSLKLLRKNGLAISMLREYLELQAVSD------ 345
             T+     +C ++       +T+ NC +   L  +N  +  M      +Q V++      
Sbjct: 950  NTILTPSSVCNNQPVCRWLVFTLPNCFN---LDAENPCSNDMAIISPRMQIVTNMLQKLQ 1006

Query: 346  ---PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHST 402
               P    SI  PGS+IP W   QN GS +T+  P + +  N  +GFA+CCVF     + 
Sbjct: 1007 NFLPDFGFSIFLPGSEIPDWISNQNLGSEVTIELPPHWFESN-FLGFAVCCVFAFEDIAP 1065

Query: 403  GTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVV--------------SDHLWLLFLP 448
                     + +L C +  S E H   FRG  GH++              S H+WL + P
Sbjct: 1066 NGC------SSQLLCQLQ-SDESH---FRG-IGHILHSIDCEGNSEDRLKSHHMWLAYKP 1114

Query: 449  R------HG---HNWQFESNLIRLSFRSIS-DPTWKVKRCGFHPIYMHEVEEFDETTKQS 498
            R      +G   + W+      + SF  IS  P+  V++CG H IY  + EE + T    
Sbjct: 1115 RGRLRISYGDCPNRWRHA----KASFGFISCCPSNMVRKCGIHLIYAQDHEERNSTM--- 1167

Query: 499  TRFTSCNLNEVHHDFVG--SNMEVAQ----ASGSG 527
                      +HH   G  S+++ A     ASGSG
Sbjct: 1168 ----------IHHSSSGNFSDLKSADSSVGASGSG 1192



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 93/146 (63%), Gaps = 1/146 (0%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T I EL  +I  L GL+ L L  CK L+ LP +I  LK L TL LS  S
Sbjct: 655 PNLERLVLEGCTTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACS 714

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K   FPEI  + + L ++ L+GTA++ L  SIE L+G +  NL+DCKNL +LP +I  L+
Sbjct: 715 KLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLK 774

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL  +  SGCSKL+ + E LG ++ L
Sbjct: 775 SLETLIVSGCSKLQQLPENLGSLQCL 800



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 11/128 (8%)

Query: 647 CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I++       +L DGT +++L  +IE L GLV L L  CKNL  LP 
Sbjct: 713 CSKL----ESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPC 768

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL +SG SK ++ PE   S   L+++  +GT +R  P+SI LL    + + 
Sbjct: 769 SIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILSF 828

Query: 760 KDCKNLKS 767
             CK L S
Sbjct: 829 GGCKGLAS 836



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 3/120 (2%)

Query: 686 LTLNGCKNLER-LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRG 743
           + LN C +  R L +    L  L+T+ LS        P   SS   L  + LEG T I  
Sbjct: 612 IELNMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPNF-SSMPNLERLVLEGCTTISE 670

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP SI  L+G IL +L++CK LKSLPS+I  L+SL  +  S CSKL++  E +  +E L+
Sbjct: 671 LPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENMEHLK 730



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 31/217 (14%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E+L +L +  + + E+    E+L  L  + L+  ++L+ LP+  + + +L+ L L GC  
Sbjct: 609 ENLIELNMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPN-FSSMPNLERLVLEGCTT 667

Query: 136 LENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEP---PASASWHL 191
           +  +P ++G +  L  LD+     ++   SSI  +K+L +L  S C++    P       
Sbjct: 668 ISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENME 727

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
           HL   LL  ++  +  + PS+  +  L  L+L DC                         
Sbjct: 728 HLKKLLLDGTA--LKQLHPSIEHLNGLVSLNLRDC------------------------K 761

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           N  TLP SI  L +LE L +  C +LQ LP+   +LQ
Sbjct: 762 NLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQ 798


>gi|224146780|ref|XP_002336335.1| predicted protein [Populus trichocarpa]
 gi|222834747|gb|EEE73210.1| predicted protein [Populus trichocarpa]
          Length = 540

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 226/537 (42%), Positives = 310/537 (57%), Gaps = 37/537 (6%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           ++EV SSI     L  + L  C++L+SLP  IS L  L  L LSGCSKLK+FP+I  + +
Sbjct: 5   LSEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKK 64

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L KL LD TSI E+P SI+ L GL  L L +CK L  LPSSINGLKSLKTL+LSGC +L
Sbjct: 65  CLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSEL 124

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS--WHLHLP 194
           EN+P+  G++E L ELDVSGTAIR P  SIF +KNL+ L F GC E   S +  W   L 
Sbjct: 125 ENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQ-RLM 183

Query: 195 FNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
           F L+ GK +   +L+LPSL+G+ SLT+L LS+C LGE A+P+DI  L SL++L L+RN F
Sbjct: 184 FPLMPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKF 243

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL--------FGAL 305
           V+LP SI  L  L+ L +EDCK LQSLPQ+PPNL+ +R NGC+SL  +        F  L
Sbjct: 244 VSLPTSIDQLSGLKFLYMEDCKMLQSLPQLPPNLELLRVNGCTSLEKMQFSSNPYKFNCL 303

Query: 306 KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMY 365
             C      INC    +    N +  ++LR+    Q   +     S+  PGS+IP WF +
Sbjct: 304 SFC-----FINCWRLSESDCWNNMFHTLLRKC--FQGPPNLIEVFSVFIPGSEIPTWFSH 356

Query: 366 QNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH-ELECSMDGSGE 424
           Q+EGSS++V  P +    ++ +G+A+C   +    ++   L   + +   + C  +G   
Sbjct: 357 QSEGSSVSVQTPPHSLENDECLGYAVCASLEYDGCASSELLTDYWVSGVPISCFFNGVNY 416

Query: 425 GHYI-YF-RG-----KFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKR 477
           G  + YF RG     K  ++ SDHLW LF P     +    +L   ++R    P  KV +
Sbjct: 417 GSVMSYFHRGIEMQWKRDNIPSDHLWYLFFPSRFKIFDRHVSLRFETYR----PQIKVIK 472

Query: 478 CGFHPIYMHEVEE-----FDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSS 529
           CG  P+Y  +VE       DE  ++S   T      +      +N +V +ASGS SS
Sbjct: 473 CGVRPVYHQDVENSTFEGVDECFQESGGSTMRGGGALVKRLCYTN-DVGEASGSVSS 528



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/120 (47%), Positives = 81/120 (67%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ + L  C++L  LP  IS L  L  L+LSG SK +EFPEI  ++  L ++ L+ T+I 
Sbjct: 18  LIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIE 77

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI+ L G I  +LKDCK L  LPS+INGL+SL+ ++ SGCS+L+N+ E  G++E L
Sbjct: 78  ELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECL 137



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 25/201 (12%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K L  L LD TSI E+P SI+ L GL  L+LK CK LS LP +I+ LK L+TL LSGCS+
Sbjct: 64  KCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSE 123

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI----- 119
           L+  P+    +E L++L + GT+I E P SI  L  L++L  + C    R  ++I     
Sbjct: 124 LENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFHGCAESSRSTTNIWQRLM 183

Query: 120 ----NGLKSLKT---------------LNLSGCCKLEN-VPDTLGKVESLEELDVSGTAI 159
                G ++  T               L LS C   E  VP+ +G + SL +L++S    
Sbjct: 184 FPLMPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLSRNKF 243

Query: 160 RRPTSSIFLMKNLRSLYFSGC 180
               +SI  +  L+ LY   C
Sbjct: 244 VSLPTSIDQLSGLKFLYMEDC 264



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 15/154 (9%)

Query: 647 CSRLWEEADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     EFP+I        ++  D T I EL  +I+ L GL+ L+L  CK L  LP 
Sbjct: 50  CSKL----KEFPEIEGNKKCLRKLCLDQTSIEELPPSIQYLVGLISLSLKDCKKLSCLPS 105

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I+ LK L TL+LSG S+    PE     + L E+ + GTAIR  P SI  L    + + 
Sbjct: 106 SINGLKSLKTLHLSGCSELENLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSF 165

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
             C   +S  ST N  +  R+M+P    K  N T
Sbjct: 166 HGCA--ESSRSTTNIWQ--RLMFPLMPGKRANST 195



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 5/169 (2%)

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
           C+ L  + SSI     L  +NL  C  L ++P  +  +  LEEL +SG +  +    I  
Sbjct: 2   CRRLSEVHSSIGHHNKLIYVNLMDCESLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEG 61

Query: 169 MKN-LRSLYF--SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD 225
            K  LR L    +   E P S  + + L  +L  K    ++ +  S+ G+ SL  L LS 
Sbjct: 62  NKKCLRKLCLDQTSIEELPPSIQYLVGL-ISLSLKDCKKLSCLPSSINGLKSLKTLHLSG 120

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           C   E  +P +   L  L EL ++       P SI  L NL+ L    C
Sbjct: 121 CSELE-NLPENFGQLECLNELDVSGTAIREPPVSIFSLKNLKILSFHGC 168


>gi|359496026|ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 203/513 (39%), Positives = 284/513 (55%), Gaps = 32/513 (6%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L  L  +G T + EV  S+ +L+ L  L LK CKNL   P +I  L+ L+ L L
Sbjct: 669  FSGIPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIE-LESLKVLIL 727

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKL  FP+I+ +ME L +L+LDGT+I E+P S+E L GL LL L  C+ L+ LPSSI
Sbjct: 728  SGCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSI 787

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSL TL LSGC +LE +P+ LG +E L EL   G+A+ +P SSI L++NL+ L F G
Sbjct: 788  CNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQG 847

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            CN  P+S           L + S      LPSL+G+CSL +L+LSDC + E A+P+D+  
Sbjct: 848  CNGSPSSRWNSRFWSMLCLRRISDSTGFRLPSLSGLCSLKQLNLSDCNIKEGALPNDLGG 907

Query: 240  -LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
             L SL+ L L  N+FVTLP  IS L NL+ L L  CKRLQ LP +PPN+  + A  C+SL
Sbjct: 908  YLSSLEYLNLKGNDFVTLPTGISKLCNLKALYLGCCKRLQELPMLPPNINRINAQNCTSL 967

Query: 299  VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
             TL G    C   +T           R+N    + L E   +        K +   PG+ 
Sbjct: 968  ETLSGLSAPCWLAFT--------NSFRQNWGQETYLAEVSRIP-------KFNTYLPGNG 1012

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV--PKHSTGTYLFHSYPAHELE 416
            IP+WF  Q  G SI V  PS+ YN N  +GFA+C VF +  P   +   +     + +L+
Sbjct: 1013 IPEWFRNQCMGDSIMVQLPSHWYNDN-FLGFAMCIVFALKEPNQCSRGAMLCELESSDLD 1071

Query: 417  CSMDGSGEGHYIY--FRGKFGHVVSDHLWLLFLP-----RHGHNWQFESNLIRLSFRSIS 469
             S  G    H ++       G V SDHLWL + P     +   +W  + + I+ SF    
Sbjct: 1072 PSNLGCFLDHIVWEGHSDGDGFVESDHLWLGYHPNFPIKKDDMDWPNKLSHIKASFVIAG 1131

Query: 470  DPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFT 502
             P  +VK CGF  +YM   E+ ++   + T+++
Sbjct: 1132 IPH-EVKWCGFRLVYM---EDLNDDNSKITKYS 1160



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 97/146 (66%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G TD+RE+  ++ +L  L+ L L  CKNL+  P +I  L+ L  L LSG S
Sbjct: 673 PNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIE-LESLKVLILSGCS 731

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K   FPEI  + + L E+ L+GTAI+ LP S+E L+G +L NL++C+ L +LPS+I  L+
Sbjct: 732 KLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLK 791

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL  +  SGCS+L+ + E LG +E L
Sbjct: 792 SLSTLTLSGCSQLEKLPENLGNLECL 817



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 11/112 (9%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    D FP+I++ +        DGT I+EL L++E L GLV L L  C+ L  LP 
Sbjct: 730 CSKL----DNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPS 785

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
           +I  LK LSTL LSG S+  + PE   + + L+E+  +G+A+   P+SI LL
Sbjct: 786 SICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIVLL 837


>gi|296090591|emb|CBI40960.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 205/512 (40%), Positives = 289/512 (56%), Gaps = 30/512 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L +L+L+GT+ITE+PSSI   T L  L ++ CK   SLP  I  LK L+ L+LS
Sbjct: 175 LGYLPNLLELHLNGTAITELPSSIGYATQLVSLDMEDCKRFKSLPCCIYKLKSLKILKLS 234

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GC+K + FP+I+ +ME L +L+LDGT+I E+P S+E L GL LL L  C+ L+ LPSSI 
Sbjct: 235 GCAKFESFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSIC 294

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LKSL TL LSGC +LE +P+ LG +E L EL   G+A+ +P SSI L++NL+ L F GC
Sbjct: 295 NLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLKVLSFQGC 354

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN- 239
           N  P+S           L + S      LPSL+G+CSL +L+LSDC + E A+P+D+   
Sbjct: 355 NGSPSSRWNSRFWSMLCLRRISDSTGFRLPSLSGLCSLKQLNLSDCNIKEGALPNDLGGY 414

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L L  N+FVTLP  IS L NL+ L L  CKRLQ LP +PPN+  + A  C+SL 
Sbjct: 415 LSSLEYLNLKGNDFVTLPTGISKLCNLKALYLGCCKRLQELPMLPPNINRINAQNCTSLE 474

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           TL G    C   +T           R+N    + L E   +        K +   PG+ I
Sbjct: 475 TLSGLSAPCWLAFT--------NSFRQNWGQETYLAEVSRIP-------KFNTYLPGNGI 519

Query: 360 PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV--PKHSTGTYLFHSYPAHELEC 417
           P+WF  Q  G SI V  PS+ YN N  +GFA+C VF +  P   +   +     + +L+ 
Sbjct: 520 PEWFRNQCMGDSIMVQLPSHWYNDN-FLGFAMCIVFALKEPNQCSRGAMLCELESSDLDP 578

Query: 418 SMDGSGEGHYIY--FRGKFGHVVSDHLWLLFLP-----RHGHNWQFESNLIRLSFRSISD 470
           S  G    H ++       G V SDHLWL + P     +   +W  + + I+ SF     
Sbjct: 579 SNLGCFLDHIVWEGHSDGDGFVESDHLWLGYHPNFPIKKDDMDWPNKLSHIKASFVIAGI 638

Query: 471 PTWKVKRCGFHPIYMHEVEEFDETTKQSTRFT 502
           P  +VK CGF  +YM   E+ ++   + T+++
Sbjct: 639 PH-EVKWCGFRLVYM---EDLNDDNSKITKYS 666



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 98/163 (60%), Gaps = 11/163 (6%)

Query: 647 CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    D+FP+I+  L +       GT I EL  +I     LV L +  CK  + LP 
Sbjct: 165 CSKL----DKFPEILGYLPNLLELHLNGTAITELPSSIGYATQLVSLDMEDCKRFKSLPC 220

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I  LK L  L LSG +KF  FPEI  + + L E+ L+GTAI+ LP S+E L+G +L NL
Sbjct: 221 CIYKLKSLKILKLSGCAKFESFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNL 280

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           ++C+ L +LPS+I  L+SL  +  SGCS+L+ + E LG +E L
Sbjct: 281 RNCERLITLPSSICNLKSLSTLTLSGCSQLEKLPENLGNLECL 323



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G TD+RE+  ++ +L  L+ L L  CKNL+  P +I  L+ L  L LSG S
Sbjct: 108 PNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIE-LESLKVLILSGCS 166

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FPEI      LLE+HL GTAI  LP+SI   +  +  +++DCK  KSLP  I  L+
Sbjct: 167 KLDKFPEILGYLPNLLELHLNGTAITELPSSIGYATQLVSLDMEDCKRFKSLPCCIYKLK 226

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL+++  SGC+K ++  E L  +E L
Sbjct: 227 SLKILKLSGCAKFESFPEILENMEGL 252



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 7/104 (6%)

Query: 655 DEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FP+I++       +  DGT I+EL L++E L GLV L L  C+ L  LP +I  LK L
Sbjct: 240 ESFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERLITLPSSICNLKSL 299

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
           STL LSG S+  + PE   + + L+E+  +G+A+   P+SI LL
Sbjct: 300 STLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIVLL 343



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 110/267 (41%), Gaps = 51/267 (19%)

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY---------------- 105
           C  +++  + V  ME L  + L  +           +P LE L                 
Sbjct: 71  CCYVEELWKGVKHMEKLECIDLSHSQYLVRTPDFSGIPNLERLIFEGCTDLREVHQSLGV 130

Query: 106 --------LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
                   L +CKNL   PSSI  L+SLK L LSGC KL+  P+ LG + +L EL ++GT
Sbjct: 131 LSKLIFLNLKDCKNLQCFPSSIE-LESLKVLILSGCSKLDKFPEILGYLPNLLELHLNGT 189

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI     L SL    C    +       LP        C   L    +  +  
Sbjct: 190 AITELPSSIGYATQLVSLDMEDCKRFKS-------LP-------CCIYKLKSLKILKLSG 235

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
             K +         + P  ++N+  L+EL+L+      LP S+  L  L  L L +C+RL
Sbjct: 236 CAKFE---------SFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLLNLRNCERL 286

Query: 278 QSLPQIPPNLQFVRA---NGCSSLVTL 301
            +LP    NL+ +     +GCS L  L
Sbjct: 287 ITLPSSICNLKSLSTLTLSGCSQLEKL 313



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 14/176 (7%)

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LPS+ +  K+L  LNL  CC +E +   +  +E LE +D+S +     T     + N
Sbjct: 52  LKSLPSNFHP-KNLVELNLC-CCYVEELWKGVKHMEKLECIDLSHSQYLVRTPDFSGIPN 109

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGK------SSCPVALMLPSLTGVCSLTKLDLSD 225
           L  L F GC +        +H    +L K        C      PS   + SL  L LS 
Sbjct: 110 LERLIFEGCTD-----LREVHQSLGVLSKLIFLNLKDCKNLQCFPSSIELESLKVLILSG 164

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           C   +   P  +  L +L EL+LN      LP+SI     L  L++EDCKR +SLP
Sbjct: 165 CSKLDK-FPEILGYLPNLLELHLNGTAITELPSSIGYATQLVSLDMEDCKRFKSLP 219


>gi|224114331|ref|XP_002332400.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832723|gb|EEE71200.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1119

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 201/491 (40%), Positives = 272/491 (55%), Gaps = 50/491 (10%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G TS++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 486 FTGIPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLE-MESLKVCIL 544

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M  L  L LDGT I E+ SSI  L GLE+L +  CKNL  +PSSI
Sbjct: 545 DGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSI 604

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+L GC + EN+P+ LGKVESLEE DVSGT+IR+P +SIFL+KNL+ L F G
Sbjct: 605 GCLKSLKKLDLFGCSEFENIPENLGKVESLEEFDVSGTSIRQPPASIFLLKNLKVLSFDG 664

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C     S +                    LPSL+G+CSL  LDL  C L E A+P DI  
Sbjct: 665 CKRIAESLT-----------------DQRLPSLSGLCSLEVLDLCACNLREGALPEDIGC 707

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SLK L L+RNNFV+LP SI+ L  LE L LEDC  L+SLP++P  +Q +  NGC  L 
Sbjct: 708 LSSLKSLDLSRNNFVSLPRSINQLSGLEMLALEDCTMLESLPEVPSKVQTLNLNGCIRLK 767

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
            +    +L  SK +   C++  +L   NG   + ++ML  YLE   +S+P     I  PG
Sbjct: 768 EIPDPTELSSSKRSEFICLNCWELYNHNGEDSMGLTMLERYLE--GLSNPRPGFGIAIPG 825

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           ++IP WF +Q+ GSSI+V  PS+       +GF  C  F     S   +           
Sbjct: 826 NEIPGWFNHQSMGSSISVQVPSW------SMGFVACVAFSANGESPSLF----------- 868

Query: 417 CSMDGSGEGHY---IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSI 468
           C    +G  +Y   +     +  V+SDH+WL +L     +    W+ ES + I LSF S 
Sbjct: 869 CHFKANGRENYPSPMCISCNYIQVLSDHIWLFYLSFDHLKELKEWKHESYSNIELSFHSF 928

Query: 469 SDPTWKVKRCG 479
             P  KVK CG
Sbjct: 929 Q-PGVKVKNCG 938



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 88/148 (59%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++     L  + L  C+++  LP  +  ++ L    L G 
Sbjct: 489 IPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLE-MESLKVCILDGC 547

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           SK  +FP+I  + + L+ + L+GT I  L +SI  L G  + ++K CKNLKS+PS+I  L
Sbjct: 548 SKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCL 607

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +   GCS+ +N+ E LGKVESLE
Sbjct: 608 KSLKKLDLFGCSEFENIPENLGKVESLE 635



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 18/154 (11%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       DGT I ELS +I  L GL  L++  CKNL+ +P 
Sbjct: 547 CSKL----EKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPS 602

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+L G S+F   PE     + L E  + GT+IR  PASI LL    + + 
Sbjct: 603 SIGCLKSLKKLDLFGCSEFENIPENLGKVESLEEFDVSGTSIRQPPASIFLLKNLKVLSF 662

Query: 760 KDCKNL------KSLPSTINGLRSLRMMYPSGCS 787
             CK +      + LPS ++GL SL ++    C+
Sbjct: 663 DGCKRIAESLTDQRLPS-LSGLCSLEVLDLCACN 695



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 33/240 (13%)

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           +++L +L++  +++ ++    +    L+++ L+   +L + P    G+ +L++L L GC 
Sbjct: 443 VDELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPD-FTGIPNLESLILEGCT 501

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE------------ 182
            L  V  +LG  + L+ +++      R   S   M++L+     GC++            
Sbjct: 502 SLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMN 561

Query: 183 ------------PPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLG 229
                          S+S H  +   +L   +C     +PS  G + SL KLDL  C   
Sbjct: 562 CLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEF 621

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL------QSLPQI 283
           E  IP ++  + SL+E  ++  +    PASI  L NL+ L  + CKR+      Q LP +
Sbjct: 622 E-NIPENLGKVESLEEFDVSGTSIRQPPASIFLLKNLKVLSFDGCKRIAESLTDQRLPSL 680



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 13/136 (9%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNL------ERLPRTISALKYLSTLNLSGLSKFRE 720
           GT IR+   +I LL  L  L+ +GCK +      +RLP ++S L  L  L+L   +  RE
Sbjct: 641 GTSIRQPPASIFLLKNLKVLSFDGCKRIAESLTDQRLP-SLSGLCSLEVLDLCACN-LRE 698

Query: 721 --FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
              PE       L  + L       LP SI  LSG  +  L+DC  L+SLP   + +++L
Sbjct: 699 GALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEMLALEDCTMLESLPEVPSKVQTL 758

Query: 779 RMMYPSGCSKLKNVTE 794
            +   +GC +LK + +
Sbjct: 759 NL---NGCIRLKEIPD 771



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F      + G 
Sbjct: 340 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----FDMPGI 387

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S++                    D+L
Sbjct: 388 KEAQWNMKAFSKMSRLRLLKIDNV-QLSEGPENLSNKLLFLEWHSYPSKSLPAGLQVDEL 446

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  + +  L    +      + NL +  +L   P    G+ +L  +   GC+ L  
Sbjct: 447 VELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPD-FTGIPNLESLILEGCTSLSE 505

Query: 792 VTETLGKVESLE 803
           V  +LG  + L+
Sbjct: 506 VHPSLGYHKKLQ 517


>gi|224114311|ref|XP_002332395.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832718|gb|EEE71195.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1144

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 212/551 (38%), Positives = 297/551 (53%), Gaps = 65/551 (11%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 487 LTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNLE-MESLKVFTL 545

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GC KL+KFP +V +M  L  L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 546 DGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSI 605

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           + LKSLK L+LSGC +L+N+P  LGKVESLEE DVSGT+IR+P +SIFL+K+L+ L F G
Sbjct: 606 SCLKSLKKLDLSGCSELKNIPKNLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDG 665

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C     + + H                  LPSL+G+CSL  LDL  C L E A+P DI  
Sbjct: 666 CKRIAVNPTDH-----------------RLPSLSGLCSLEVLDLCACNLREGALPEDIGF 708

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L L++NNFV+LP SI+ L  LE L LEDC  L+SLP++P  +Q V  NGC SL 
Sbjct: 709 LSSLRSLDLSQNNFVSLPQSINQLFELERLVLEDCSMLESLPEVPSKVQTVNLNGCISLK 768

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
            +   +KL  SK +   C++  +L   NG   + ++ML  Y  L+ +S+P     IV PG
Sbjct: 769 EIPDPIKLSSSKISEFLCLNCWELYEHNGQDSMGLTMLERY--LKGLSNPRPGFGIVVPG 826

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           ++IP WF ++++GSSI+V  PS+       +GF  C  F     S   +           
Sbjct: 827 NEIPGWFNHRSKGSSISVQVPSW------SMGFVACVAFSANGESPSLF----------- 869

Query: 417 CSMDGSGEGHY---IYFRGKFGHVVSDHLWLLFLPRHG----HNWQFES-NLIRLSFRSI 468
           C    +G  +Y   +        V+SDH+WL +L          WQ  S + I LSF S 
Sbjct: 870 CHFKTNGRENYPSPMCISCNSIQVLSDHIWLFYLSFDYLIELKEWQHGSFSNIELSFHS- 928

Query: 469 SDPTWKVKRCGF----------HPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGS-- 516
           S P  KVK CG            P   H +    ET   S+   S  L+  +H ++ S  
Sbjct: 929 SQPRVKVKNCGVCLLSSLYITSQPSSAHFIVTSKETA--SSYKASLTLSSSYHHWMASVF 986

Query: 517 -NMEVAQASGS 526
            ++ VA  S +
Sbjct: 987 PDIRVADTSNA 997



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L    L G  K  +FP++  + + L+ + L+ T I 
Sbjct: 517 LQYVNLVNCKSIRILPSNLE-MESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGIT 575

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  L G  L ++  CKNLKS+PS+I+ L+SL+ +  SGCS+LKN+ + LGKVESL
Sbjct: 576 KLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESL 635

Query: 803 E 803
           E
Sbjct: 636 E 636



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 12/145 (8%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           ++FPD+V+ ++       D T I +LS +I  L GL  L++N CKNL+ +P +IS LK L
Sbjct: 552 EKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSL 611

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             L+LSG S+ +  P+     + L E  + GT+IR  PASI LL    + +   CK +  
Sbjct: 612 KKLDLSGCSELKNIPKNLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDGCKRIAV 671

Query: 768 LPS-----TINGLRSLRMMYPSGCS 787
            P+     +++GL SL ++    C+
Sbjct: 672 NPTDHRLPSLSGLCSLEVLDLCACN 696



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 341 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----LDMPGI 388

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K+ +      S +  L  L ++ + +  E PE  S++                    D+L
Sbjct: 389 KDAQWNMEAFSKMSKLRLLKINNV-QLSEGPEDLSNKLRFLEWYSYPSKSLPAGLQVDEL 447

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  + +  L    +      + NL    NL   P  + G+ +L  +   GC+ L  
Sbjct: 448 VELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTPD-LTGIPNLESLILEGCTSLSE 506

Query: 792 VTETLGKVESLE 803
           V  +LG  ++L+
Sbjct: 507 VHPSLGSHKNLQ 518


>gi|255561514|ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223538980|gb|EEF40577.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 205/522 (39%), Positives = 287/522 (54%), Gaps = 34/522 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G TS+++V  SI +L  L LL LK C  L SLP +I  L+ L  L L
Sbjct: 427 FTGVPNLETLILEGCTSLSKVHPSIGVLKKLILLNLKDCNCLRSLPGSIG-LESLNVLVL 485

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKL+KFP+IV  M  LSKL LDGT+IAEVP S   L GL  L L  CKNL +LPS+I
Sbjct: 486 SGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFANLTGLTFLSLRNCKNLEKLPSNI 545

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           N LK LK L+L GC KL+++PD+LG +E LE+LD+  T++R+P SSI L+K L+ L F G
Sbjct: 546 NSLKYLKNLDLFGCSKLKSLPDSLGYLECLEKLDLGKTSVRQPPSSIRLLKYLKVLSFHG 605

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
               P +  W   +  ++ G +   V L LPSL G+ SLT+LDLSDC L +  IP+D   
Sbjct: 606 IG--PIAWQWPYKI-LSIFGITHDAVGLSLPSLNGLLSLTELDLSDCNLSDKMIPADFYT 662

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L + RNNFV +PASIS L  L  L L+DCK L++L ++P  +  + AN C+SL 
Sbjct: 663 LSSLEVLNIGRNNFVNIPASISQLPRLRFLYLDDCKNLKALRKLPTTIHEISANNCTSLE 722

Query: 300 TLFG----ALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYL------ELQAVSDPGHK 349
           TL      A K     +   NC         +  A   LR +L      +LQ  S  G +
Sbjct: 723 TLSSPEVIADKWNWPIFYFTNCSKLAVNQGNDSTAFKFLRSHLQSLPMSQLQDASYTGCR 782

Query: 350 LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH--------S 401
             ++ PG+++P WF +QN GSS+ +      YN  K  G AIC  F   ++        S
Sbjct: 783 FDVIVPGTEVPAWFSHQNVGSSLIIQLTPKWYN-EKFKGLAICLSFATHENPHLLPDGLS 841

Query: 402 TGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGH---NWQFES 458
           T   ++    A E       +    + +   +   + S+HLW+ F  R G    NW    
Sbjct: 842 TDIAIYCKLEAVEY------TSTSSFKFLIYRVPSLKSNHLWMGFHSRIGFGKSNWLNNC 895

Query: 459 NLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTR 500
             +++SF S S P  +VK CG   +Y  + ++++    QS+ 
Sbjct: 896 GYLKVSFES-SVPCMEVKYCGIRFVYDQDEDDYNLIPFQSSH 936



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 1/113 (0%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
           C  L  LP +I  L+ L+ L LSG SK  +FPEI      L ++ L+GTAI  +P S   
Sbjct: 465 CNCLRSLPGSI-GLESLNVLVLSGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFAN 523

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           L+G    +L++CKNL+ LPS IN L+ L+ +   GCSKLK++ ++LG +E LE
Sbjct: 524 LTGLTFLSLRNCKNLEKLPSNINSLKYLKNLDLFGCSKLKSLPDSLGYLECLE 576



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 11/112 (9%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FP+IV  ++       DGT I E+  +   L GL  L+L  CKNLE+LP 
Sbjct: 488 CSKL----EKFPEIVGDMAHLSKLGLDGTAIAEVPHSFANLTGLTFLSLRNCKNLEKLPS 543

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
            I++LKYL  L+L G SK +  P+     + L ++ L  T++R  P+SI LL
Sbjct: 544 NINSLKYLKNLDLFGCSKLKSLPDSLGYLECLEKLDLGKTSVRQPPSSIRLL 595


>gi|359493250|ref|XP_002268462.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1439

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 203/548 (37%), Positives = 298/548 (54%), Gaps = 41/548 (7%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M+ L +LYL  T+I E+PSS+E LTGL LL LK CKNL SLP ++  L+ L  L  SG
Sbjct: 896  GNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSG 955

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP+++  ME+L +L LDGTSI  +PSSI+ L  L LL L  CKNLV LP  +  
Sbjct: 956  CSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCT 1015

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC +L N+P  LG ++ L +    GTAI +P  SI L++NL+ L + GC 
Sbjct: 1016 LTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCK 1075

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                ++   L   + L    S  ++L LPS  +   S T LDLSDC L E AIP+ I +L
Sbjct: 1076 RLAPTSLGSLFSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSL 1135

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
             SLK+L L+RN+F++ PA IS L +L++L L   + L  +P++PP+++ +  + C++L+ 
Sbjct: 1136 ISLKKLDLSRNDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTALLP 1195

Query: 301  LFGALKLCRSKYTIINCI--DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
               +L   R+   +I  +      ++  +  ++S L     L          SIVFPGS 
Sbjct: 1196 GPSSL---RTNPVVIRGMKYKDFHIIVSSTASVSSLTTSPVLMQKLFENIAFSIVFPGSG 1252

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-QVPK----HSTGTYLFHSYPAH 413
            IP+W  +Q+ GSSI +  P+  YN +  +GFA+C V  Q+P+    H      ++     
Sbjct: 1253 IPEWIWHQSVGSSIKIELPTDWYN-DDFLGFALCSVLEQLPERIICHLNSDVFYYG---- 1307

Query: 414  ELECSMDGSGEGHYIYFRGKFGHVVSDHLWL---------LFLPRHGHNWQFESNLIRLS 464
                  D    GH  +++G   HV S+H+WL         LF     ++W    N I +S
Sbjct: 1308 ------DLKDFGHDFHWKG--NHVGSEHVWLGHQPCSQLRLFQFNDPNDW----NHIEIS 1355

Query: 465  F----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEV 520
            F    R  S  +  VK+CG   IY   +E      ++  +   CN+ E   D  G N   
Sbjct: 1356 FEAAHRFNSSASNVVKKCGVCLIYTEVLEGIHPGNRKQLKSRGCNVVERSSDRAGFNRSG 1415

Query: 521  AQASGSGS 528
              +S SGS
Sbjct: 1416 MDSSYSGS 1423



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/280 (38%), Positives = 151/280 (53%), Gaps = 31/280 (11%)

Query: 2    ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             S  +L  L LDG +S+ +V  SI  L+ L LL LK CK L S  ++I +++ L  L LS
Sbjct: 825  VSAPNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSF-LSIINMEALEILNLS 883

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             CS+LKKFP I  +ME L +LYL  T+I E+PSS+E L GL LL L  CKNL  LP+S+ 
Sbjct: 884  DCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVC 943

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             L+SL+ L  SGC KLEN P+ +  +E+L+EL + GT+I    SSI  +K L        
Sbjct: 944  KLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLV------- 996

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDI 237
                            LL   +C   + LP   G+C+LT L+   +S C      +P ++
Sbjct: 997  ----------------LLNLRNCKNLVSLPK--GMCTLTSLETLIVSGCS-QLNNLPKNL 1037

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
             +L  L + + +       P SI  L NL+ L    CKRL
Sbjct: 1038 GSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRL 1077



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 7/157 (4%)

Query: 653  EADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
            E  +FPDI       +++    T I EL  ++E L GLV L L  CKNL+ LP ++  L+
Sbjct: 887  ELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLE 946

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             L  L  SG SK   FPE+    + L E+ L+GT+I GLP+SI+ L   +L NL++CKNL
Sbjct: 947  SLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNL 1006

Query: 766  KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             SLP  +  L SL  +  SGCS+L N+ + LG ++ L
Sbjct: 1007 VSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHL 1043



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 31/223 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M  M++L +L LDGTSI  +PSSI+ L  L LL L+ CKNL SLP  + +L  L TL +S
Sbjct: 966  MEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVS 1025

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-------- 112
            GCS+L   P+ + S++ L++ + DGT+I + P SI LL  L++L    CK L        
Sbjct: 1026 GCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSL 1085

Query: 113  ---------------VRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVS- 155
                           +RLPS  +   S   L+LS C  +E  +P+++  + SL++LD+S 
Sbjct: 1086 FSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSR 1145

Query: 156  GTAIRRPT--SSIFLMKNLRSLYFSGCNE----PPASASWHLH 192
               +  P   S +  +K+LR   +    E    PP+    H H
Sbjct: 1146 NDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPH 1188



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 95/147 (64%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ ++  DG + + ++  +I  L  L+ L L  CK L      I+ ++ L  LNLS  S
Sbjct: 828 PNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIIN-MEALEILNLSDCS 886

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           + ++FP+I  + + LLE++L  TAI  LP+S+E L+G +L +LK CKNLKSLP+++  L 
Sbjct: 887 ELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLE 946

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  ++PSGCSKL+N  E +  +E+L+
Sbjct: 947 SLEYLFPSGCSKLENFPEMMEDMENLK 973



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 5/145 (3%)

Query: 644  PGNCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
            P  CS+L    E  ++  ++ ++L DGT I  L  +I+ L  LV L L  CKNL  LP+ 
Sbjct: 953  PSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKG 1012

Query: 701  ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
            +  L  L TL +SG S+    P+   S   L + H +GTAI   P SI LL    +    
Sbjct: 1013 MCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYP 1072

Query: 761  DCKNLKSLPSTINGLRSLRMMYPSG 785
             CK L   P+++  L S  +++ +G
Sbjct: 1073 GCKRLA--PTSLGSLFSFWLLHRNG 1095



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 147/341 (43%), Gaps = 54/341 (15%)

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            EDL +L +  +S+ ++  S  LL  L  + L+ C++L+ +P       +L+ L L GC  
Sbjct: 781  EDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSS 840

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASW-H 190
            L  V  ++GK+  L  L++      R   SI  M+ L  L  S C+E    P    +  H
Sbjct: 841  LVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELKKFPDIQGNMEH 900

Query: 191  L-----------HLP--------FNLLGKSSCPVALMLPSLTGVCSLTKLDL---SDCGL 228
            L            LP          LL    C     LP  T VC L  L+    S C  
Sbjct: 901  LLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLP--TSVCKLESLEYLFPSGCSK 958

Query: 229  GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPP 285
             E   P  ++++ +LKEL L+  +   LP+SI  L  L  L L +CK L SLP+      
Sbjct: 959  LE-NFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLT 1017

Query: 286  NLQFVRANGCSSLVTL---FGALKLCRSKY----TIINCIDSLKLLRKNGLAISMLREYL 338
            +L+ +  +GCS L  L    G+L+     +     I    DS+ LLR             
Sbjct: 1018 SLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRN------------ 1065

Query: 339  ELQAVSDPG-HKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
             L+ +  PG  +L+    GS    W +++N  + I++  PS
Sbjct: 1066 -LKVLIYPGCKRLAPTSLGSLFSFWLLHRNGSNGISLRLPS 1105



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 54/263 (20%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           ++ G+  V ++ P+EPG  SRLW     FPD+      GT         E + G++ L L
Sbjct: 671 QQMGQHIVGQEFPEEPGKWSRLW-----FPDV------GT---------EAIKGIL-LNL 709

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKF---REFPEITSSRD------QLLEIHLEGT 739
           +  K +     + + +K LS L +    +F   RE  ++  S+D      +L  ++ +G 
Sbjct: 710 SIPKPIHVTTESFAMMKNLSLLKIYSDYEFASMREHSKVKLSKDFEFSSYELRYLYWQGY 769

Query: 740 AIRGLPASI----------------ELLSGNIL------SNLKDCKNLKSLPSTINGLRS 777
            +  LP+S                 +L   ++L        L  C++L  +P       +
Sbjct: 770 PLESLPSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPN 829

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
           L  +   GCS L  V  ++GK+  L + L+  N  K+++    +   A+E +  L+    
Sbjct: 830 LEKLTLDGCSSLVKVHPSIGKLSKL-ILLNLKNCKKLRSFLSIINMEALE-ILNLSDCSE 887

Query: 838 LRDSDSWKKNVDKCMKLSTTATS 860
           L+     + N++  ++L   +T+
Sbjct: 888 LKKFPDIQGNMEHLLELYLASTA 910


>gi|147789504|emb|CAN71924.1| hypothetical protein VITISV_006193 [Vitis vinifera]
          Length = 1297

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 203/548 (37%), Positives = 298/548 (54%), Gaps = 41/548 (7%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M+ L +LYL  T+I E+PSS+E LTGL LL LK CKNL SLP ++  L+ L  L  SG
Sbjct: 754  GNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSG 813

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP+++  ME+L +L LDGTSI  +PSSI+ L  L LL L  CKNLV LP  +  
Sbjct: 814  CSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCT 873

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC +L N+P  LG ++ L +    GTAI +P  SI L++NL+ L + GC 
Sbjct: 874  LTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCK 933

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                ++   L   + L    S  ++L LPS  +   S T LDLSDC L E AIP+ I +L
Sbjct: 934  RLAPTSLGSLFSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSL 993

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
             SLK+L L+RN+F++ PA IS L +L++L L   + L  +P++PP+++ +  + C++L+ 
Sbjct: 994  ISLKKLDLSRNDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCTALLP 1053

Query: 301  LFGALKLCRSKYTIINCI--DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
               +L   R+   +I  +      ++  +  ++S L     L          SIVFPGS 
Sbjct: 1054 GPSSL---RTNPVVIRGMKYKDFHIIVSSTASVSSLTTSPVLMQKLFENIAFSIVFPGSG 1110

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-QVPK----HSTGTYLFHSYPAH 413
            IP+W  +Q+ GSSI +  P+  YN +  +GFA+C V  Q+P+    H      ++     
Sbjct: 1111 IPEWIWHQSVGSSIKIELPTDWYN-DDFLGFALCSVLEQLPERIICHLNSDVFYYG---- 1165

Query: 414  ELECSMDGSGEGHYIYFRGKFGHVVSDHLWL---------LFLPRHGHNWQFESNLIRLS 464
                  D    GH  +++G   HV S+H+WL         LF     ++W    N I +S
Sbjct: 1166 ------DLKDFGHDFHWKG--NHVGSEHVWLGHQPCSQLRLFQFNDPNDW----NHIEIS 1213

Query: 465  F----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEV 520
            F    R  S  +  VK+CG   IY   +E      ++  +   CN+ E   D  G N   
Sbjct: 1214 FEAAHRFNSSASNVVKKCGVCLIYTEVLEGIHPGNRKQLKSRGCNVVERSSDRAGFNRSG 1273

Query: 521  AQASGSGS 528
              +S SGS
Sbjct: 1274 MDSSYSGS 1281



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/280 (38%), Positives = 151/280 (53%), Gaps = 31/280 (11%)

Query: 2   ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            S  +L  L LDG +S+ +V  SI  L+ L LL LK CK L S  ++I +++ L  L LS
Sbjct: 683 VSAPNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSF-LSIINMEALEILNLS 741

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            CS+LKKFP I  +ME L +LYL  T+I E+PSS+E L GL LL L  CKNL  LP+S+ 
Sbjct: 742 DCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVC 801

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+SL+ L  SGC KLEN P+ +  +E+L+EL + GT+I    SSI  +K L        
Sbjct: 802 KLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLV------- 854

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDI 237
                           LL   +C   + LP   G+C+LT L+   +S C      +P ++
Sbjct: 855 ----------------LLNLRNCKNLVSLPK--GMCTLTSLETLIVSGCS-QLNNLPKNL 895

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            +L  L + + +       P SI  L NL+ L    CKRL
Sbjct: 896 GSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRL 935



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 7/157 (4%)

Query: 653 EADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           E  +FPDI       +++    T I EL  ++E L GLV L L  CKNL+ LP ++  L+
Sbjct: 745 ELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLE 804

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L  L  SG SK   FPE+    + L E+ L+GT+I GLP+SI+ L   +L NL++CKNL
Sbjct: 805 SLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNL 864

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            SLP  +  L SL  +  SGCS+L N+ + LG ++ L
Sbjct: 865 VSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHL 901



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 31/223 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M  M++L +L LDGTSI  +PSSI+ L  L LL L+ CKNL SLP  + +L  L TL +S
Sbjct: 824  MEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVS 883

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-------- 112
            GCS+L   P+ + S++ L++ + DGT+I + P SI LL  L++L    CK L        
Sbjct: 884  GCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSL 943

Query: 113  ---------------VRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVS- 155
                           +RLPS  +   S   L+LS C  +E  +P+++  + SL++LD+S 
Sbjct: 944  FSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSR 1003

Query: 156  GTAIRRPT--SSIFLMKNLRSLYFSGCNE----PPASASWHLH 192
               +  P   S +  +K+LR   +    E    PP+    H H
Sbjct: 1004 NDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPH 1046



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 95/147 (64%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ ++  DG + + ++  +I  L  L+ L L  CK L      I+ ++ L  LNLS  S
Sbjct: 686 PNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSFLSIIN-MEALEILNLSDCS 744

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           + ++FP+I  + + LLE++L  TAI  LP+S+E L+G +L +LK CKNLKSLP+++  L 
Sbjct: 745 ELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLE 804

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  ++PSGCSKL+N  E +  +E+L+
Sbjct: 805 SLEYLFPSGCSKLENFPEMMEDMENLK 831



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 5/145 (3%)

Query: 644 PGNCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P  CS+L    E  ++  ++ ++L DGT I  L  +I+ L  LV L L  CKNL  LP+ 
Sbjct: 811 PSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKG 870

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
           +  L  L TL +SG S+    P+   S   L + H +GTAI   P SI LL    +    
Sbjct: 871 MCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYP 930

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSG 785
            CK L   P+++  L S  +++ +G
Sbjct: 931 GCKRLA--PTSLGSLFSFWLLHRNG 953



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 147/341 (43%), Gaps = 54/341 (15%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           EDL +L +  +S+ ++  S  LL  L  + L+ C++L+ +P       +L+ L L GC  
Sbjct: 639 EDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSS 698

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASW-H 190
           L  V  ++GK+  L  L++      R   SI  M+ L  L  S C+E    P    +  H
Sbjct: 699 LVKVHPSIGKLSKLILLNLKNCKKLRSFLSIINMEALEILNLSDCSELKKFPDIQGNMEH 758

Query: 191 L-----------HLP--------FNLLGKSSCPVALMLPSLTGVCSLTKLDL---SDCGL 228
           L            LP          LL    C     LP  T VC L  L+    S C  
Sbjct: 759 LLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLP--TSVCKLESLEYLFPSGCSK 816

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPP 285
            E   P  ++++ +LKEL L+  +   LP+SI  L  L  L L +CK L SLP+      
Sbjct: 817 LE-NFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLT 875

Query: 286 NLQFVRANGCSSLVTL---FGALKLCRSKY----TIINCIDSLKLLRKNGLAISMLREYL 338
           +L+ +  +GCS L  L    G+L+     +     I    DS+ LLR             
Sbjct: 876 SLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRN------------ 923

Query: 339 ELQAVSDPG-HKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
            L+ +  PG  +L+    GS    W +++N  + I++  PS
Sbjct: 924 -LKVLIYPGCKRLAPTSLGSLFSFWLLHRNGSNGISLRLPS 963



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 115/263 (43%), Gaps = 45/263 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           ++ G+  V ++ P+EPG  SRLW     FPD+V      + +    +  E + G++ L L
Sbjct: 520 QQMGQHIVGQEFPEEPGKWSRLW-----FPDVV------SRVLTRKMGTEAIKGIL-LNL 567

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKF---REFPEITSSRD------QLLEIHLEGT 739
           +  K +     + + +K LS L +    +F   RE  ++  S+D      +L  ++ +G 
Sbjct: 568 SIPKPIHVTTESFAMMKNLSLLKIYSDYEFASMREHSKVKLSKDFEFSSYELRYLYWQGY 627

Query: 740 AIRGLPASI----------------ELLSGNIL------SNLKDCKNLKSLPSTINGLRS 777
            +  LP+S                 +L   ++L        L  C++L  +P       +
Sbjct: 628 PLESLPSSFYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPN 687

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
           L  +   GCS L  V  ++GK+  L + L+  N  K+++    +   A+E +  L+    
Sbjct: 688 LEKLTLDGCSSLVKVHPSIGKLSKL-ILLNLKNCKKLRSFLSIINMEALE-ILNLSDCSE 745

Query: 838 LRDSDSWKKNVDKCMKLSTTATS 860
           L+     + N++  ++L   +T+
Sbjct: 746 LKKFPDIQGNMEHLLELYLASTA 768


>gi|105922631|gb|ABF81427.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1336

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 200/489 (40%), Positives = 273/489 (55%), Gaps = 52/489 (10%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  + +L  L L+G TS+++V  S+     L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 573  LTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MESLKVFTL 631

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             GCSKL+KFP IV +M  L +L LDGT + E+ SSI  L  LE+L +N CKNL  +PSSI
Sbjct: 632  DGCSKLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSI 691

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSLK L+LSGC +L+N    L KVES EE D SGT+IR+P + IFL+KNL+ L F G
Sbjct: 692  GCLKSLKKLDLSGCSELKN----LEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDG 747

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C     S +                    LPSL+G+CSL  LDL  C L E A+P DI  
Sbjct: 748  CKRIAVSLT-----------------DQRLPSLSGLCSLEVLDLCACNLREGALPEDIGC 790

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SLK L L+RNNFV+LP S++ L  LE L LEDC+ L+SLP++P  +Q V  NGC+SL 
Sbjct: 791  LSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLK 850

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
             +   +KL  SK +   C++  +L   NG   + ++ML  Y  LQ +S+P     I  PG
Sbjct: 851  EIPDPIKLSSSKISEFLCLNCWELYEHNGQDSMGLTMLERY--LQGLSNPRPGFGIAVPG 908

Query: 357  SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
            ++IP WF +Q++GSSI+V  PS+       +GF  C  F     + G   F       L 
Sbjct: 909  NEIPGWFNHQSKGSSISVQVPSW------SMGFVACVAFS----AYGERPF-------LR 951

Query: 417  CSMDGSGEGHYIYFRGKFG-HVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSISD 470
            C    +G  +Y          V+SDH+WL +L     +    WQ ES + I LSF S   
Sbjct: 952  CDFKANGRENYPSLMCINSIQVLSDHIWLFYLSFDYLKELKEWQNESFSNIELSFHSYER 1011

Query: 471  PTWKVKRCG 479
               KVK CG
Sbjct: 1012 RV-KVKNCG 1019



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L    L G SK  +FP+I  + + L+E+ L+GT + 
Sbjct: 603 LQYMNLVNCKSIRILPNNLE-MESLKVFTLDGCSKLEKFPDIVGNMNCLMELRLDGTGVE 661

Query: 743 GLPASIE-LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            L +SI  L+S  +LS + +CKNL+S+PS+I  L+SL+ +  SGCS+LKN    L KVES
Sbjct: 662 ELSSSIHHLISLEVLS-MNNCKNLESIPSSIGCLKSLKKLDLSGCSELKN----LEKVES 716

Query: 802 LE 803
            E
Sbjct: 717 SE 718



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 22/154 (14%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       DGT + ELS +I  L  L  L++N CKNLE +P 
Sbjct: 634 CSKL----EKFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPS 689

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +   ++ SS     E    GT+IR  PA I LL    + + 
Sbjct: 690 SIGCLKSLKKLDLSGCSELKNLEKVESSE----EFDASGTSIRQPPAPIFLLKNLKVLSF 745

Query: 760 KDCKNL------KSLPSTINGLRSLRMMYPSGCS 787
             CK +      + LPS ++GL SL ++    C+
Sbjct: 746 DGCKRIAVSLTDQRLPS-LSGLCSLEVLDLCACN 778



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 29/182 (15%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE- 182
           +LK +NLS    L   PD  G                        + NL SL   GC   
Sbjct: 555 NLKIINLSNSLNLSKTPDLTG------------------------IPNLESLILEGCTSL 590

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                S   H     +   +C    +LP+   + SL    L  C   E   P  + N++ 
Sbjct: 591 SKVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMESLKVFTLDGCSKLE-KFPDIVGNMNC 649

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLV 299
           L EL L+      L +SI  L++LE L + +CK L+S+P     L+ ++    +GCS L 
Sbjct: 650 LMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELK 709

Query: 300 TL 301
            L
Sbjct: 710 NL 711



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 13/140 (9%)

Query: 665 SDGTDIRELSLAIELLFGLVQLTLNGCKNL------ERLPRTISALKYLSTLNLSGLSKF 718
           + GT IR+    I LL  L  L+ +GCK +      +RLP ++S L  L  L+L   +  
Sbjct: 722 ASGTSIRQPPAPIFLLKNLKVLSFDGCKRIAVSLTDQRLP-SLSGLCSLEVLDLCACN-L 779

Query: 719 RE--FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           RE   PE       L  + L       LP S+  LSG  +  L+DC+ L+SLP   + ++
Sbjct: 780 REGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQ 839

Query: 777 SLRMMYPSGCSKLKNVTETL 796
           ++ +   +GC+ LK + + +
Sbjct: 840 TVNL---NGCTSLKEIPDPI 856



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 26/188 (13%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +S +EPG  SRLW     F D+   L D T   +    IE +F  +       
Sbjct: 427 GKEIVRSESSEEPGRRSRLW----TFEDVRLALMDNTGKEK----IEAIFLDMPEIKEAQ 478

Query: 692 KNLERLPRTISALKYLSTLN---------LSGLSKFREFPEITSSR-------DQLLEIH 735
            N+E   + +S L+ L   N         LS   +F E+    S         D+L+E+H
Sbjct: 479 WNMEAFSK-MSRLRLLKIDNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELH 537

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           +  ++I  L    +      + NL +  NL   P  + G+ +L  +   GC+ L  V  +
Sbjct: 538 MANSSIEQLWYGCKSAVNLKIINLSNSLNLSKTPD-LTGIPNLESLILEGCTSLSKVHPS 596

Query: 796 LGKVESLE 803
           L   + L+
Sbjct: 597 LAHHKKLQ 604


>gi|224104273|ref|XP_002333965.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222839252|gb|EEE77603.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1033

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 200/489 (40%), Positives = 273/489 (55%), Gaps = 52/489 (10%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS+++V  S+     L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 401 LTGIPNLESLILEGCTSLSKVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MESLKVFTL 459

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M  L +L LDGT + E+ SSI  L  LE+L +N CKNL  +PSSI
Sbjct: 460 DGCSKLEKFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSI 519

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+N    L KVES EE D SGT+IR+P + IFL+KNL+ L F G
Sbjct: 520 GCLKSLKKLDLSGCSELKN----LEKVESSEEFDASGTSIRQPPAPIFLLKNLKVLSFDG 575

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C     S +                    LPSL+G+CSL  LDL  C L E A+P DI  
Sbjct: 576 CKRIAVSLTDQ-----------------RLPSLSGLCSLEVLDLCACNLREGALPEDIGC 618

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SLK L L+RNNFV+LP S++ L  LE L LEDC+ L+SLP++P  +Q V  NGC+SL 
Sbjct: 619 LSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLK 678

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
            +   +KL  SK +   C++  +L   NG   + ++ML  Y  LQ +S+P     I  PG
Sbjct: 679 EIPDPIKLSSSKISEFLCLNCWELYEHNGQDSMGLTMLERY--LQGLSNPRPGFGIAVPG 736

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           ++IP WF +Q++GSSI+V  PS+       +GF  C  F     + G   F       L 
Sbjct: 737 NEIPGWFNHQSKGSSISVQVPSW------SMGFVACVAFS----AYGERPF-------LR 779

Query: 417 CSMDGSGEGHYIYFRGKFG-HVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSISD 470
           C    +G  +Y          V+SDH+WL +L     +    WQ ES + I LSF S   
Sbjct: 780 CDFKANGRENYPSLMCINSIQVLSDHIWLFYLSFDYLKELKEWQNESFSNIELSFHSYER 839

Query: 471 PTWKVKRCG 479
              KVK CG
Sbjct: 840 RV-KVKNCG 847



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 7/122 (5%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L    L G SK  +FP+I  + + L+E+ L+GT + 
Sbjct: 431 LQYMNLVNCKSIRILPNNLE-MESLKVFTLDGCSKLEKFPDIVGNMNCLMELRLDGTGVE 489

Query: 743 GLPASIE-LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            L +SI  L+S  +LS + +CKNL+S+PS+I  L+SL+ +  SGCS+LKN    L KVES
Sbjct: 490 ELSSSIHHLISLEVLS-MNNCKNLESIPSSIGCLKSLKKLDLSGCSELKN----LEKVES 544

Query: 802 LE 803
            E
Sbjct: 545 SE 546



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 22/154 (14%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       DGT + ELS +I  L  L  L++N CKNLE +P 
Sbjct: 462 CSKL----EKFPDIVGNMNCLMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPS 517

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +   ++ SS     E    GT+IR  PA I LL    + + 
Sbjct: 518 SIGCLKSLKKLDLSGCSELKNLEKVESSE----EFDASGTSIRQPPAPIFLLKNLKVLSF 573

Query: 760 KDCKNL------KSLPSTINGLRSLRMMYPSGCS 787
             CK +      + LPS ++GL SL ++    C+
Sbjct: 574 DGCKRIAVSLTDQRLPS-LSGLCSLEVLDLCACN 606



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 29/182 (15%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE- 182
           +LK +NLS    L   PD  G                        + NL SL   GC   
Sbjct: 383 NLKIINLSNSLNLSKTPDLTG------------------------IPNLESLILEGCTSL 418

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                S   H     +   +C    +LP+   + SL    L  C   E   P  + N++ 
Sbjct: 419 SKVHPSLAHHKKLQYMNLVNCKSIRILPNNLEMESLKVFTLDGCSKLE-KFPDIVGNMNC 477

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSLV 299
           L EL L+      L +SI  L++LE L + +CK L+S+P       +L+ +  +GCS L 
Sbjct: 478 LMELRLDGTGVEELSSSIHHLISLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCSELK 537

Query: 300 TL 301
            L
Sbjct: 538 NL 539



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 13/140 (9%)

Query: 665 SDGTDIRELSLAIELLFGLVQLTLNGCKNL------ERLPRTISALKYLSTLNLSGLSKF 718
           + GT IR+    I LL  L  L+ +GCK +      +RLP ++S L  L  L+L   +  
Sbjct: 550 ASGTSIRQPPAPIFLLKNLKVLSFDGCKRIAVSLTDQRLP-SLSGLCSLEVLDLCACN-L 607

Query: 719 RE--FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           RE   PE       L  + L       LP S+  LSG  +  L+DC+ L+SLP   + ++
Sbjct: 608 REGALPEDIGCLSSLKSLDLSRNNFVSLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQ 667

Query: 777 SLRMMYPSGCSKLKNVTETL 796
           ++ +   +GC+ LK + + +
Sbjct: 668 TVNL---NGCTSLKEIPDPI 684



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 26/188 (13%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +S +EPG  SRLW     F D+   L D T   +    IE +F  +       
Sbjct: 255 GKEIVRSESSEEPGRRSRLW----TFEDVRLALMDNTGKEK----IEAIFLDMPEIKEAQ 306

Query: 692 KNLERLPRTISALKYLSTLN---------LSGLSKFREFPEITSSR-------DQLLEIH 735
            N+E   + +S L+ L   N         LS   +F E+    S         D+L+E+H
Sbjct: 307 WNMEAFSK-MSRLRLLKIDNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELH 365

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           +  ++I  L    +      + NL +  NL   P  + G+ +L  +   GC+ L  V  +
Sbjct: 366 MANSSIEQLWYGCKSAVNLKIINLSNSLNLSKTPD-LTGIPNLESLILEGCTSLSKVHPS 424

Query: 796 LGKVESLE 803
           L   + L+
Sbjct: 425 LAHHKKLQ 432


>gi|147821215|emb|CAN66453.1| hypothetical protein VITISV_004613 [Vitis vinifera]
          Length = 1441

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 211/560 (37%), Positives = 305/560 (54%), Gaps = 69/560 (12%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M++L +LYL  T+I E+PSSI  LTGL LL LK CKNL SLP +I  LK L  L LSG
Sbjct: 877  GNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSG 936

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP++  +M++L +L LDGT I  +PSSIE L GL LL L +CKNLV L + +  
Sbjct: 937  CSKLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLSNGMCN 996

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC 
Sbjct: 997  LTSLETLIVSGCSQLNNLPRNLGSLQCLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCK 1056

Query: 182  --EPPASAS----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP 234
               P +  S    W LH      G S   + L LP S +   SL+ LD+SDC L E AIP
Sbjct: 1057 ILAPNSLGSLFSFWLLH------GNSPNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIP 1110

Query: 235  SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
            + I +L SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ + A+ 
Sbjct: 1111 NGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHN 1170

Query: 295  CSSLVTLFGALKLCRS-KYTIINCI----DSLKLLRKNGLAI------------------ 331
            C++L+    ++   +  ++   NC     D     ++  L I                  
Sbjct: 1171 CTALLPGSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTS 1230

Query: 332  -SMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
              M+++ LE  A        SIVFPG+ IP W  +QN GSSI +  P+  Y+ +  +GFA
Sbjct: 1231 PVMMQKLLENIA-------FSIVFPGTGIPDWIWHQNVGSSIKIQLPTDWYS-DDFLGFA 1282

Query: 391  ICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLF 446
            +C V +   H     + H      L   +   G+    GH  ++ G    V S+H+WL +
Sbjct: 1283 LCSVLE---HLPERIICH------LNSDVFDYGDLKDFGHDFHWTGNI--VGSEHVWLGY 1331

Query: 447  LP-RHGHNWQF----ESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
             P      +QF    E N I +SF    R  S  +  VK+CG   IY  ++E      ++
Sbjct: 1332 QPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLEGIRPQNRK 1391

Query: 498  STRFTSCNLNEVHHDFVGSN 517
              + + CN+ E   D  G N
Sbjct: 1392 QLKSSGCNVVERSSDRAGLN 1411



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/281 (39%), Positives = 147/281 (52%), Gaps = 31/281 (11%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + S  +L  L LDG +S+ EV  SI  L  L LL LK CK L   P +I  +K L  L  
Sbjct: 805  IVSAPNLEKLILDGCSSLLEVHPSIGKLNKLFLLNLKNCKKLICFP-SIIDMKALEILNF 863

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CS LKKFP I  +ME+L +LYL  T+I E+PSSI  L GL LL L  CKNL  LP+SI
Sbjct: 864  SSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSI 923

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSL+ L+LSGC KLE+ P+    +++L+EL + GT I    SSI  +K L  L    
Sbjct: 924  CKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRK 983

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSD 236
            C               NL+  S+           G+C+LT L+   +S C      +P +
Sbjct: 984  CK--------------NLVSLSN-----------GMCNLTSLETLIVSGCS-QLNNLPRN 1017

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            + +L  L +L+ +       P SI  L NL+ L    CK L
Sbjct: 1018 LGSLQCLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKIL 1058



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 92/154 (59%), Gaps = 7/154 (4%)

Query: 656  EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
            +FP+I       +++    T I EL  +I  L GLV L L  CKNL+ LP +I  LK L 
Sbjct: 871  KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLE 930

Query: 709  TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
             L+LSG SK   FPE+T + D L E+ L+GT I  LP+SIE L G IL NL+ CKNL SL
Sbjct: 931  NLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSL 990

Query: 769  PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             + +  L SL  +  SGCS+L N+   LG ++ L
Sbjct: 991  SNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQCL 1024



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 153/341 (44%), Gaps = 53/341 (15%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
            L+ L T+ +S    L + P I+ S  +L KL LDG +S+ EV  SI  L  L LL L  C
Sbjct: 784  LEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSLLEVHPSIGKLNKLFLLNLKNC 843

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            K L+  PS I+ +K+L+ LN S C  L+  P+  G +E+L EL ++ TAI    SSI  +
Sbjct: 844  KKLICFPSIID-MKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHL 902

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
              L  L    C               NL    S P      S+  + SL  L LS C   
Sbjct: 903  TGLVLLDLKWCK--------------NL---KSLPT-----SICKLKSLENLSLSGCSKL 940

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN--- 286
            E + P   +N+ +LKEL L+      LP+SI  L  L  L L  CK L SL     N   
Sbjct: 941  E-SFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLSNGMCNLTS 999

Query: 287  LQFVRANGCSSLVTL---FGAL----KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLE 339
            L+ +  +GCS L  L    G+L    +L      I    DS+ LLR              
Sbjct: 1000 LETLIVSGCSQLNNLPRNLGSLQCLAQLHADGTAIAQPPDSIVLLRN------------- 1046

Query: 340  LQAVSDPGHKLSIVFP---GSQIPKWFMYQNEGSSITVTRP 377
            LQ +  PG K  I+ P   GS    W ++ N  + I +  P
Sbjct: 1047 LQVLIYPGCK--ILAPNSLGSLFSFWLLHGNSPNGIGLRLP 1085



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 91/156 (58%), Gaps = 9/156 (5%)

Query: 656 EFPDIV-------QVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           E PDI+       +++ DG + + E+  +I  L  L  L L  CK L   P  I  +K L
Sbjct: 800 EIPDIIVSAPNLEKLILDGCSSLLEVHPSIGKLNKLFLLNLKNCKKLICFPSIID-MKAL 858

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             LN S  S  ++FP I  + + LLE++L  TAI  LP+SI  L+G +L +LK CKNLKS
Sbjct: 859 EILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKS 918

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP++I  L+SL  +  SGCSKL++  E    +++L+
Sbjct: 919 LPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLK 954



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 16/149 (10%)

Query: 647  CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP++ +       +L DGT I  L  +IE L GL+ L L  CKNL  L  
Sbjct: 937  CSKL----ESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLILLNLRKCKNLVSLSN 992

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
             +  L  L TL +SG S+    P    S   L ++H +GTAI   P SI LL    +   
Sbjct: 993  GMCNLTSLETLIVSGCSQLNNLPRNLGSLQCLAQLHADGTAIAQPPDSIVLLRNLQVLIY 1052

Query: 760  KDCKNLKSLPSTINGLRSLRMMY---PSG 785
              CK L   P+++  L S  +++   P+G
Sbjct: 1053 PGCKILA--PNSLGSLFSFWLLHGNSPNG 1079



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + S++ L+ L+ DGT+I + P SI LL  L++L   GCK L+  P ++ SL     L  +
Sbjct: 1018 LGSLQCLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILA--PNSLGSLFSFWLLHGN 1075

Query: 61   GCSKLK-KFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
              + +  + P   +S   LS L +    + E  +P+ I  L  L+ L L+   N + +P+
Sbjct: 1076 SPNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSR-NNFLSIPA 1134

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
             I+ L +LK L L  C  L  +P+    V  ++  +   TA+   +SS+  ++ L+ L++
Sbjct: 1135 GISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNC--TALLPGSSSVSTLQGLQFLFY 1192

Query: 178  SGCNEPPASAS 188
            + C++P    S
Sbjct: 1193 N-CSKPVEDQS 1202


>gi|359487015|ref|XP_003633506.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1610

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 209/554 (37%), Positives = 304/554 (54%), Gaps = 57/554 (10%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M++L +LYL  T+I E+PSSI  LTGL LL LK CKNL SLP +I  LK L  L LSG
Sbjct: 935  GNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSG 994

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP++  +M++L +L LDGT I  +P SIE L GL LL L +CKNLV L + +  
Sbjct: 995  CSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSLSNGMCN 1054

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC 
Sbjct: 1055 LTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCK 1114

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                ++   L   + L G SS  + L LP S +   SL+ LD+SDC L E AIP+ I +L
Sbjct: 1115 ILAPNSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSL 1174

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL-- 298
             SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ + A+ C++L  
Sbjct: 1175 ISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLP 1234

Query: 299  ----VTLFGALKLC----------------RSKYTIINCIDSLKLLRKNGLAIS--MLRE 336
                V+    L+                  R++  I   I       ++ +  S  M+++
Sbjct: 1235 GSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASESSVTTSPVMMQK 1294

Query: 337  YLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ 396
             LE  A        SIVFPG+ IP W  +QN GSSI +  P+  Y+ +  +GFA+C V +
Sbjct: 1295 LLENIA-------FSIVFPGTGIPDWIWHQNVGSSIKIQLPTDWYS-DDFLGFALCSVLE 1346

Query: 397  VPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLFLP-RHG 451
               H     + H      L   +   G+    GH  ++ G    V S+H+WL + P    
Sbjct: 1347 ---HLPERIICH------LNSDVFDYGDLKDFGHDFHWTGNI--VGSEHVWLGYQPCSQL 1395

Query: 452  HNWQF----ESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTS 503
              +QF    E N I +SF    R  S  +  VK+CG   IY  ++E      ++  + + 
Sbjct: 1396 RLFQFNDPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLEGIRPQNRKQLKSSG 1455

Query: 504  CNLNEVHHDFVGSN 517
            CN+ E   D  G N
Sbjct: 1456 CNVVERSSDRAGLN 1469



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/281 (39%), Positives = 146/281 (51%), Gaps = 31/281 (11%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + S  +L  L LDG +S+ EV  SI  L  L LL LK CK L   P +I  +K L  L  
Sbjct: 863  IVSAPNLEKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFP-SIIDMKALEILNF 921

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CS LKKFP I  +ME+L +LYL  T+I E+PSSI  L GL LL L  CKNL  LP+SI
Sbjct: 922  SSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSI 981

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSL+ L+LSGC KLE+ P+    +++L+EL + GT I     SI  +K L  L    
Sbjct: 982  CKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRK 1041

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSD 236
            C               NL+  S+           G+C+LT L+   +S C      +P +
Sbjct: 1042 CK--------------NLVSLSN-----------GMCNLTSLETLIVSGCS-QLNNLPRN 1075

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            + +L  L +L+ +       P SI  L NL+ L    CK L
Sbjct: 1076 LGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKIL 1116



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 7/154 (4%)

Query: 656  EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
            +FP+I       +++    T I EL  +I  L GLV L L  CKNL+ LP +I  LK L 
Sbjct: 929  KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLE 988

Query: 709  TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
             L+LSG SK   FPE+T + D L E+ L+GT I  LP SIE L G IL NL+ CKNL SL
Sbjct: 989  NLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSL 1048

Query: 769  PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             + +  L SL  +  SGCS+L N+   LG ++ L
Sbjct: 1049 SNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQRL 1082



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 152/341 (44%), Gaps = 53/341 (15%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
            L+ L T+ +S    L + P I+ S  +L KL LDG +S+ EV  SI  L  L LL L  C
Sbjct: 842  LEKLNTIRVSCSQHLIEIPDIIVSAPNLEKLILDGCSSLLEVHPSIGKLNKLILLNLKNC 901

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            K L+  PS I+ +K+L+ LN S C  L+  P+  G +E+L EL ++ TAI    SSI  +
Sbjct: 902  KKLICFPSIID-MKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHL 960

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
              L  L    C               NL    S P      S+  + SL  L LS C   
Sbjct: 961  TGLVLLDLKWCK--------------NL---KSLPT-----SICKLKSLENLSLSGCSKL 998

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN--- 286
            E + P   +N+ +LKEL L+      LP SI  L  L  L L  CK L SL     N   
Sbjct: 999  E-SFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSLSNGMCNLTS 1057

Query: 287  LQFVRANGCSSLVTL---FGAL----KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLE 339
            L+ +  +GCS L  L    G+L    +L      I    DS+ LLR              
Sbjct: 1058 LETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRN------------- 1104

Query: 340  LQAVSDPGHKLSIVFP---GSQIPKWFMYQNEGSSITVTRP 377
            LQ +  PG K  I+ P   GS    W ++ N  + I +  P
Sbjct: 1105 LQVLIYPGCK--ILAPNSLGSLFSFWLLHGNSSNGIGLRLP 1143



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 9/156 (5%)

Query: 656  EFPDIV-------QVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
            E PDI+       +++ DG + + E+  +I  L  L+ L L  CK L   P  I  +K L
Sbjct: 858  EIPDIIVSAPNLEKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIID-MKAL 916

Query: 708  STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
              LN S  S  ++FP I  + + LLE++L  TAI  LP+SI  L+G +L +LK CKNLKS
Sbjct: 917  EILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKS 976

Query: 768  LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            LP++I  L+SL  +  SGCSKL++  E    +++L+
Sbjct: 977  LPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLK 1012



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 13/143 (9%)

Query: 647  CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP++ +       +L DGT I  L L+IE L GL+ L L  CKNL  L  
Sbjct: 995  CSKL----ESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLILLNLRKCKNLVSLSN 1050

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
             +  L  L TL +SG S+    P    S  +L ++H +GTAI   P SI LL    +   
Sbjct: 1051 GMCNLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIY 1110

Query: 760  KDCKNLKSLPSTINGLRSLRMMY 782
              CK L   P+++  L S  +++
Sbjct: 1111 PGCKILA--PNSLGSLFSFWLLH 1131



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + S++ L+ L+ DGT+I + P SI LL  L++L   GCK L+  P ++ SL     L  +
Sbjct: 1076 LGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILA--PNSLGSLFSFWLLHGN 1133

Query: 61   GCSKLK-KFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
              + +  + P   +S   LS L +    + E  +P+ I  L  L+ L L+   N + +P+
Sbjct: 1134 SSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSR-NNFLSIPA 1192

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
             I+ L +LK L L  C  L  +P+    V  ++  +   TA+   +SS+  ++ L+ L++
Sbjct: 1193 GISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNC--TALLPGSSSVSTLQGLQFLFY 1250

Query: 178  SGCNEPPASAS 188
            + C++P    S
Sbjct: 1251 N-CSKPVEDQS 1260


>gi|224116210|ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1017

 Score =  285 bits (730), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 196/493 (39%), Positives = 268/493 (54%), Gaps = 61/493 (12%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L +L L+G TS++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 405 FTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLE-MESLKVFTL 463

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL++FP IV +M  L  L LDGT IAE+ SSI  L GL LL +  CKNL  +PSSI
Sbjct: 464 DGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSI 523

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LS C  L+N+P+ LGKVESLEE DVSGT+IR+  +S+FL+KNL+ L   G
Sbjct: 524 GCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGTSIRQLPASVFLLKNLKVLSLDG 583

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C                          ++LPSL+ +CSL  L L  C L E  +P DI  
Sbjct: 584 CKR-----------------------IVVLPSLSRLCSLEVLGLRACNLREGELPEDIGY 620

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L L++NNFV+LP +I+ L  LE L LEDC  L SLP++P  +Q V  NGC SL 
Sbjct: 621 LSSLRSLDLSQNNFVSLPKAINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLK 680

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
           T+   +KL  SK +   C++  +L   NG   + ++ML  Y  LQ  S+P     I  PG
Sbjct: 681 TIPDPIKLSSSKRSEFLCLNCWELYNHNGQESMGLTMLERY--LQGFSNPRPGFGIAVPG 738

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           ++IP WF ++++GSSI+V  PS        +GF  C  F     S   +           
Sbjct: 739 NEIPGWFNHRSKGSSISVQVPS------GRMGFFACVAFNANDESPSLF----------- 781

Query: 417 CSMDGSGEGHY-----IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFR 466
           C    +G  +Y     I F    GH+ SDH+WL +L     +    WQ ES + I LSF 
Sbjct: 782 CHFKANGRENYPSPMCINFE---GHLFSDHIWLFYLSFDYLKELQEWQHESFSNIELSFH 838

Query: 467 SISDPTWKVKRCG 479
           S      KV  CG
Sbjct: 839 SYEQGV-KVNNCG 850



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++     L  + L  C+++  LP  +  ++ L    L G 
Sbjct: 408 IPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLE-MESLKVFTLDGC 466

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           SK   FP+I  + + L+ + L+GT I  L +SI  L G  L ++ +CKNL+S+PS+I  L
Sbjct: 467 SKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCL 526

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +  S CS LKN+ E LGKVESLE
Sbjct: 527 KSLKKLDLSCCSALKNIPENLGKVESLE 554



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 101/199 (50%), Gaps = 17/199 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FPDIV  ++       DGT I ELS +I  L GL  L++  CKNLE +P 
Sbjct: 466 CSKL----ERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPS 521

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LS  S  +  PE     + L E  + GT+IR LPAS+ LL    + +L
Sbjct: 522 SIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGTSIRQLPASVFLLKNLKVLSL 581

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSSWNR----PKM 814
             CK +  LPS ++ L SL ++    C+ +   + E +G + SL     S N     PK 
Sbjct: 582 DGCKRIVVLPS-LSRLCSLEVLGLRACNLREGELPEDIGYLSSLRSLDLSQNNFVSLPKA 640

Query: 815 QNDFDCVEQSAVETVTKLA 833
            N    +E   +E  T LA
Sbjct: 641 INQLSELEMLVLEDCTMLA 659



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 23/178 (12%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGT------DIRELSLAIELLFGLVQ 685
           G++ VR +SP+EPG  SRLW     + D+   L D T         ++S    L    VQ
Sbjct: 276 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTAQWNMKAFSKMSKLRLLKINNVQ 331

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+  G ++L    R +    Y S    +GL             D+L+E+H+  ++I  L 
Sbjct: 332 LS-EGPEDLSNKLRFLEWHSYPSKSLPAGLQV-----------DELVELHMANSSIEQLW 379

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              +      + NL +  NL   P    G+ +L  +   GC+ L  V  +L + + L+
Sbjct: 380 YGCKSAVNLKIINLSNSLNLIKTPD-FTGIPNLENLILEGCTSLSEVHPSLARHKKLQ 436


>gi|359495276|ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 306/560 (54%), Gaps = 69/560 (12%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M++L +LYL  T+I E+PSSI  LTGL LL LK CKNL SL  +I  LK L  L LSG
Sbjct: 978  GNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSG 1037

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP+++ +M++L +L LDGT I  +PSSIE L GL LL L +CKNLV L + +  
Sbjct: 1038 CSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCN 1097

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC 
Sbjct: 1098 LTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCK 1157

Query: 182  --EPPASAS----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP 234
               P +  S    W LH      G SS  + L LP S +   SL+ LD+SDC L E AIP
Sbjct: 1158 ILAPTSLGSLFSFWLLH------GNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIP 1211

Query: 235  SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
            + I +L SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ + A+ 
Sbjct: 1212 NGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHN 1271

Query: 295  CSSLVTLFGALKLCRS-KYTIINCI----DSLKLLRKNGLAI------------------ 331
            C++L+    ++   +  ++   NC     D     ++  L I                  
Sbjct: 1272 CTALLPGSSSVNTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTS 1331

Query: 332  -SMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
              M+++ LE  A        SIVFPG+ IP+W  +QN GSSI +  P+  ++ +  +GFA
Sbjct: 1332 PVMMQKLLENIA-------FSIVFPGTGIPEWIWHQNVGSSIKIQLPTD-WHSDDFLGFA 1383

Query: 391  ICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLF 446
            +C V +   H     + H      L   +   G+    GH  ++ G    V S+H+WL +
Sbjct: 1384 LCSVLE---HLPERIICH------LNSDVFNYGDLKDFGHDFHWTGNI--VGSEHVWLGY 1432

Query: 447  LP-RHGHNWQF----ESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
             P      +QF    E N I +SF    R  S  +  VK+CG   IY  ++E      ++
Sbjct: 1433 QPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLEGIHPQNRK 1492

Query: 498  STRFTSCNLNEVHHDFVGSN 517
              +   CN+ E   D  G N
Sbjct: 1493 QLKSRGCNVVERSSDRAGLN 1512



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 144/270 (53%), Gaps = 31/270 (11%)

Query: 12   LDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQ 70
            LDG +S+ EV  SI  L  L LL LK CK L   P +I  +K L  L  SGCS LKKFP 
Sbjct: 917  LDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFP-SIIDMKALEILNFSGCSGLKKFPN 975

Query: 71   IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            I  +ME+L +LYL  T+I E+PSSI  L GL LL L  CKNL  L +SI  LKSL+ L+L
Sbjct: 976  IQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSL 1035

Query: 131  SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
            SGC KLE+ P+ +  +++L+EL + GT I    SSI  +K L  L    C          
Sbjct: 1036 SGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCK--------- 1086

Query: 191  LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLHSLKELY 247
                 NL+  S+           G+C+LT L+   +S C L    +P ++ +L  L +L+
Sbjct: 1087 -----NLVSLSN-----------GMCNLTSLETLIVSGC-LQLNNLPRNLGSLQRLAQLH 1129

Query: 248  LNRNNFVTLPASISGLLNLEELELEDCKRL 277
             +       P SI  L NL+ L    CK L
Sbjct: 1130 ADGTAITQPPDSIVLLRNLQVLIYPGCKIL 1159



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 89/154 (57%), Gaps = 7/154 (4%)

Query: 656  EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
            +FP+I       +++    T I EL  +I  L GLV L L  CKNL+ L  +I  LK L 
Sbjct: 972  KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLE 1031

Query: 709  TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
             L+LSG SK   FPE+  + D L E+ L+GT I  LP+SIE L G +L NL+ CKNL SL
Sbjct: 1032 NLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSL 1091

Query: 769  PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             + +  L SL  +  SGC +L N+   LG ++ L
Sbjct: 1092 SNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRL 1125



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 72/113 (63%), Gaps = 1/113 (0%)

Query: 691  CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
            CK L   P  I  +K L  LN SG S  ++FP I  + + LLE++L  TAI  LP+SI  
Sbjct: 944  CKKLICFPSIID-MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGH 1002

Query: 751  LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            L+G +L +LK CKNLKSL ++I  L+SL  +  SGCSKL++  E +  +++L+
Sbjct: 1003 LTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLK 1055



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 13/143 (9%)

Query: 647  CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP++++       +L DGT I  L  +IE L GLV L L  CKNL  L  
Sbjct: 1038 CSKL----ESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSN 1093

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
             +  L  L TL +SG  +    P    S  +L ++H +GTAI   P SI LL    +   
Sbjct: 1094 GMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIY 1153

Query: 760  KDCKNLKSLPSTINGLRSLRMMY 782
              CK L   P+++  L S  +++
Sbjct: 1154 PGCKILA--PTSLGSLFSFWLLH 1174



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 49/241 (20%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLS------------------ 42
            + S++ L+ L+ DGT+IT+ P SI LL  L++L   GCK L+                  
Sbjct: 1119 LGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLLHGNSS 1178

Query: 43   -----SLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
                  LP + SS + L  L++S C  ++   P  + S+  L KL L   +   +P+ I 
Sbjct: 1179 NGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGIS 1238

Query: 97   LLPGLELLYLNECKNLVRLP---------------------SSINGLKSLKTL--NLSGC 133
             L  L+ L L +C++L  +P                     SS+N L+ L+ L  N S  
Sbjct: 1239 ELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVNTLQGLQFLFYNCSKP 1298

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             + ++  D   +++    + VS TA      TS + + K L ++ FS          W  
Sbjct: 1299 VEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIAFSIVFPGTGIPEWIW 1358

Query: 192  H 192
            H
Sbjct: 1359 H 1359



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 19/189 (10%)

Query: 155  SGTAIRRPTSSIFLMKNLRSLYFSGCNEP-PASASWHLHLPFNLLGKSSCPVALMLPSLT 213
            S +A+ R T+  FL++++      GC+       S        LL   +C   +  PS+ 
Sbjct: 899  SASALLRATTDCFLLRHI----LDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSII 954

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             + +L  L+ S C  G    P+   N+ +L ELYL       LP+SI  L  L  L+L+ 
Sbjct: 955  DMKALEILNFSGCS-GLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKW 1013

Query: 274  CKRLQSLPQIP---PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA 330
            CK L+SL        +L+ +  +GCS L           S   ++  +D+LK L  +G  
Sbjct: 1014 CKNLKSLSTSICKLKSLENLSLSGCSKL----------ESFPEVMENMDNLKELLLDGTP 1063

Query: 331  ISMLREYLE 339
            I +L   +E
Sbjct: 1064 IEVLPSSIE 1072


>gi|147771827|emb|CAN62507.1| hypothetical protein VITISV_028498 [Vitis vinifera]
          Length = 587

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 306/560 (54%), Gaps = 69/560 (12%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L +LYL  T+I E+PSSI  LTGL LL LK CKNL SL  +I  LK L  L LSG
Sbjct: 23  GNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSG 82

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSKL+ FP+++ +M++L +L LDGT I  +PSSIE L GL LL L +CKNLV L + +  
Sbjct: 83  CSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCN 142

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC 
Sbjct: 143 LTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCK 202

Query: 182 --EPPASAS----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP 234
              P +  S    W LH      G SS  + L LP S +   SL+ LD+SDC L E AIP
Sbjct: 203 ILAPTSLGSLFSFWLLH------GNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIP 256

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
           + I +L SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ + A+ 
Sbjct: 257 NGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHN 316

Query: 295 CSSLVTLFGALKLCRS-KYTIINCI----DSLKLLRKNGLAI------------------ 331
           C++L+    ++   +  ++   NC     D     ++  L I                  
Sbjct: 317 CTALLPGSSSVNTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTS 376

Query: 332 -SMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
             M+++ LE  A        SIVFPG+ IP+W  +QN GSSI +  P+  ++ +  +GFA
Sbjct: 377 PVMMQKLLENIA-------FSIVFPGTGIPEWIWHQNVGSSIKIQLPTD-WHSDDFLGFA 428

Query: 391 ICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLF 446
           +C V +   H     + H      L   +   G+    GH  ++ G    V S+H+WL +
Sbjct: 429 LCSVLE---HLPERIICH------LNSDVFNYGDLKDFGHDFHWTGNI--VGSEHVWLGY 477

Query: 447 LP-RHGHNWQF----ESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
            P      +QF    E N I +SF    R  S  +  VK+CG   IY  ++E      ++
Sbjct: 478 QPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLEGIHPQNRK 537

Query: 498 STRFTSCNLNEVHHDFVGSN 517
             +   CN+ E   D  G N
Sbjct: 538 QLKSRGCNVVERSSDRAGLN 557



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 122/230 (53%), Gaps = 29/230 (12%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           +K L  L  SGCS LKKFP I  +ME+L +LYL  T+I E+PSSI  L GL LL L  CK
Sbjct: 1   MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 60

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
           NL  L +SI  LKSL+ L+LSGC KLE+ P+ +  +++L+EL + GT I    SSI  +K
Sbjct: 61  NLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLK 120

Query: 171 NLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCG 227
            L  L    C               NL+  S+           G+C+LT L+   +S C 
Sbjct: 121 GLVLLNLRKCK--------------NLVSLSN-----------GMCNLTSLETLIVSGC- 154

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L    +P ++ +L  L +L+ +       P SI  L NL+ L    CK L
Sbjct: 155 LQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKIL 204



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 89/154 (57%), Gaps = 7/154 (4%)

Query: 656 EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +FP+I       +++    T I EL  +I  L GLV L L  CKNL+ L  +I  LK L 
Sbjct: 17  KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLE 76

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
            L+LSG SK   FPE+  + D L E+ L+GT I  LP+SIE L G +L NL+ CKNL SL
Sbjct: 77  NLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSL 136

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            + +  L SL  +  SGC +L N+   LG ++ L
Sbjct: 137 SNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRL 170



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 67/100 (67%)

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           +K L  LN SG S  ++FP I  + + LLE++L  TAI  LP+SI  L+G +L +LK CK
Sbjct: 1   MKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCK 60

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           NLKSL ++I  L+SL  +  SGCSKL++  E +  +++L+
Sbjct: 61  NLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLK 100



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 13/143 (9%)

Query: 647 CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP++++       +L DGT I  L  +IE L GLV L L  CKNL  L  
Sbjct: 83  CSKL----ESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSN 138

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +  L  L TL +SG  +    P    S  +L ++H +GTAI   P SI LL    +   
Sbjct: 139 GMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIY 198

Query: 760 KDCKNLKSLPSTINGLRSLRMMY 782
             CK L   P+++  L S  +++
Sbjct: 199 PGCKILA--PTSLGSLFSFWLLH 219



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 49/227 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           + S++ L+ L+ DGT+IT+ P SI LL  L++L   GCK L+                  
Sbjct: 164 LGSLQRLAQLHADGTAITQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLLHGNSS 223

Query: 44  ------LPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
                 LP + SS + L  L++S C  ++   P  + S+  L KL L   +   +P+ I 
Sbjct: 224 NGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGIS 283

Query: 97  LLPGLELLYLNECKNLVRLP---------------------SSINGLKSLKTL--NLSGC 133
            L  L+ L L +C++L  +P                     SS+N L+ L+ L  N S  
Sbjct: 284 ELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVNTLQGLQFLFYNCSKP 343

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSLYFS 178
            + ++  D   +++    + VS TA      TS + + K L ++ FS
Sbjct: 344 VEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIAFS 390


>gi|147787197|emb|CAN64645.1| hypothetical protein VITISV_042806 [Vitis vinifera]
          Length = 754

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 305/560 (54%), Gaps = 69/560 (12%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L +LYL  T+I E+PSSI  LTGL LL LK CKNL SL  +I  LK L  L LSG
Sbjct: 190 GNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLENLSLSG 249

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSKL+ FP+++ +M++L +L LDGT I  +PSSIE L GL LL L +CKNLV L + +  
Sbjct: 250 CSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSNGMCN 309

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC 
Sbjct: 310 LTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCK 369

Query: 182 --EPPASAS----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP 234
              P +  S    W LH      G SS  + L LP S +   SL+ LD+SDC L E AIP
Sbjct: 370 ILAPTSLGSLFSFWLLH------GNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIP 423

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
           + I +L SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ + A+ 
Sbjct: 424 NGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHN 483

Query: 295 CSSLVTLFGALKLCRS-KYTIINCI----DSLKLLRKNGLAI------------------ 331
           C++L+    ++   +  ++   NC     D     ++  L I                  
Sbjct: 484 CTALLPGSSSVNTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTS 543

Query: 332 -SMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
             M+++ LE  A        SIVFPG+ IP+W  +QN GSSI +  P+  +  +  +GFA
Sbjct: 544 PVMMQKLLENIA-------FSIVFPGTGIPEWIWHQNVGSSIKIQLPTD-WXSDXFLGFA 595

Query: 391 ICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLF 446
           +C V +   H     + H      L   +   G+    GH  ++ G    V S+H+WL +
Sbjct: 596 LCSVLE---HLPERIICH------LNSDVFNYGDLKDFGHDFHWTGNI--VGSEHVWLGY 644

Query: 447 LP-RHGHNWQF----ESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
            P      +QF    E N I +SF    R  S  +  VK+CG   IY  ++E      ++
Sbjct: 645 QPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSXTSNVVKKCGVCLIYAEDLEGIHPQNRK 704

Query: 498 STRFTSCNLNEVHHDFVGSN 517
             +   CN+ E   D  G N
Sbjct: 705 QLKSRGCNVVERSSDRAGLN 724



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 124/234 (52%), Gaps = 29/234 (12%)

Query: 47  TISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL 106
           +I  +K L  L  SGCS LKKFP I  +ME+L +LYL  T+I E+PSSI  L GL LL L
Sbjct: 164 SIIDMKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDL 223

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
             CKNL  L +SI  LKSL+ L+LSGC KLE+ P+ +  +++L+EL + GT I    SSI
Sbjct: 224 KWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSI 283

Query: 167 FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---L 223
             +K L  L    C               NL+  S+           G+C+LT L+   +
Sbjct: 284 ERLKGLVLLNLRKCK--------------NLVSLSN-----------GMCNLTSLETLIV 318

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           S C L    +P ++ +L  L +L+ +       P SI  L NL+ L    CK L
Sbjct: 319 SGC-LQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKIL 371



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 89/154 (57%), Gaps = 7/154 (4%)

Query: 656 EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +FP+I       +++    T I EL  +I  L GLV L L  CKNL+ L  +I  LK L 
Sbjct: 184 KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSICKLKSLE 243

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
            L+LSG SK   FPE+  + D L E+ L+GT I  LP+SIE L G +L NL+ CKNL SL
Sbjct: 244 NLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSL 303

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            + +  L SL  +  SGC +L N+   LG ++ L
Sbjct: 304 SNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRL 337



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 69/104 (66%)

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  +K L  LN SG S  ++FP I  + + LLE++L  TAI  LP+SI  L+G +L +L
Sbjct: 164 SIIDMKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDL 223

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           K CKNLKSL ++I  L+SL  +  SGCSKL++  E +  +++L+
Sbjct: 224 KWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLK 267



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 13/143 (9%)

Query: 647 CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP++++       +L DGT I  L  +IE L GLV L L  CKNL  L  
Sbjct: 250 CSKL----ESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLVSLSN 305

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +  L  L TL +SG  +    P    S  +L ++H +GTAI   P SI LL    +   
Sbjct: 306 GMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIY 365

Query: 760 KDCKNLKSLPSTINGLRSLRMMY 782
             CK L   P+++  L S  +++
Sbjct: 366 PGCKILA--PTSLGSLFSFWLLH 386



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 49/227 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLS------------------ 42
           + S++ L+ L+ DGT+I + P SI LL  L++L   GCK L+                  
Sbjct: 331 LGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILAPTSLGSLFSFWLLHGNSS 390

Query: 43  -----SLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
                 LP + SS + L  L++S C  ++   P  + S+  L KL L   +   +P+ I 
Sbjct: 391 NGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISLKKLDLSRNNFLSIPAGIS 450

Query: 97  LLPGLELLYLNECKNLVRLP---------------------SSINGLKSLKTL--NLSGC 133
            L  L+ L L +C++L  +P                     SS+N L+ L+ L  N S  
Sbjct: 451 ELTNLKDLRLGQCQSLTGIPELPPSVRDIDAHNCTALLPGSSSVNTLQGLQFLFYNCSKP 510

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSLYFS 178
            + ++  D   +++    + VS TA      TS + + K L ++ FS
Sbjct: 511 VEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPVMMQKLLENIAFS 557



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 14/134 (10%)

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
            PS+  + +L  L+ S C  G    P+   N+ +L ELYL       LP+SI  L  L  
Sbjct: 162 FPSIIDMKALEILNFSGCS-GLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVL 220

Query: 269 LELEDCKRLQSLPQIP---PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
           L+L+ CK L+SL        +L+ +  +GCS L           S   ++  +D+LK L 
Sbjct: 221 LDLKWCKNLKSLSTSICKLKSLENLSLSGCSKL----------ESFPEVMENMDNLKELL 270

Query: 326 KNGLAISMLREYLE 339
            +G  I +L   +E
Sbjct: 271 LDGTPIEVLPSSIE 284


>gi|147828597|emb|CAN68630.1| hypothetical protein VITISV_003859 [Vitis vinifera]
          Length = 1500

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 303/560 (54%), Gaps = 69/560 (12%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M++L +LYL  T+I E+PSSI  LTGL LL LK CKNL SLP +I  LK L  L LSG
Sbjct: 936  GNMENLFELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSG 995

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL  FP++  +M+ L +L LDGT I  +PSSI+ L GL LL L +CKNLV L + +  
Sbjct: 996  CSKLGSFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLSNGMCN 1055

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC 
Sbjct: 1056 LTSLETLVVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCK 1115

Query: 182  --EPPASAS----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP 234
               P +  S    W LH      G SS  + L LP S +   SL+ LDLSDC L E AIP
Sbjct: 1116 ILAPTSLGSLFSFWLLH------GNSSNGIGLRLPSSFSSFRSLSNLDLSDCKLIEGAIP 1169

Query: 235  SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
            + I +L SLK+L L++NNF+++PA IS L NLE+L L  C+ L  +P++P +L+ + A+ 
Sbjct: 1170 NGICSLISLKKLDLSQNNFLSIPAGISELTNLEDLRLGQCQSLTGIPELPLSLRDIDAHN 1229

Query: 295  CSSLVTLFGALKLCRS-KYTIINCI----DSLKLLRKNGLAI------------------ 331
            C++L+    ++   +  ++   NC     D     ++  L +                  
Sbjct: 1230 CTALLPGSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQLFPHIYVSSTASDSSVTTS 1289

Query: 332  -SMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
              M+++ LE  A        SIVFPG+ IP+W  +QN GSSI +  P+  Y+ +  +GFA
Sbjct: 1290 PVMMQKLLENIA-------FSIVFPGTGIPEWIWHQNVGSSIKIQLPTDWYS-DDFLGFA 1341

Query: 391  ICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLF 446
            +C V +   H     + H      L   +   G+    GH  ++ G    V S+H+WL +
Sbjct: 1342 LCSVLE---HLPERIICH------LNSDVFDYGDLKDFGHDFHWTGDI--VGSEHVWLGY 1390

Query: 447  LP-RHGHNWQF----ESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
             P      +QF    E N I +SF    R  S  +  VK+CG   IY  +++      ++
Sbjct: 1391 QPCSQLRLFQFNDPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLDGIHPQNRK 1450

Query: 498  STRFTSCNLNEVHHDFVGSN 517
              +   CN+ E   D  G N
Sbjct: 1451 QLKSRGCNVVERSSDRAGLN 1470



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/280 (39%), Positives = 145/280 (51%), Gaps = 31/280 (11%)

Query: 2    ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             S  +L  L LDG +S+ EV  SI  L  L LL LK CK L   P +I  +K L  L  S
Sbjct: 865  VSAPNLQKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFP-SIIDMKALEILNFS 923

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            GCS LKKFP I  +ME+L +LYL  T+I E+PSSI  L GL LL L  CKNL  LP+SI 
Sbjct: 924  GCSGLKKFPNIQGNMENLFELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSIC 983

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             LKSL+ L+LSGC KL + P+    ++ L+EL + GT I    SSI  +K L  L    C
Sbjct: 984  KLKSLENLSLSGCSKLGSFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKC 1043

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDI 237
                           NL+  S+           G+C+LT L+   +S C      +P ++
Sbjct: 1044 K--------------NLVSLSN-----------GMCNLTSLETLVVSGCS-QLNNLPRNL 1077

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
             +L  L +L+ +       P SI  L NL+ L    CK L
Sbjct: 1078 GSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKIL 1117



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 85/135 (62%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I EL  +I  L GLV L L  CKNL+ LP +I  LK L  L+LSG SK   FPE+T +
Sbjct: 949  TAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLENLSLSGCSKLGSFPEVTEN 1008

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             D+L E+ L+GT I  LP+SI+ L G +L NL+ CKNL SL + +  L SL  +  SGCS
Sbjct: 1009 MDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLSNGMCNLTSLETLVVSGCS 1068

Query: 788  KLKNVTETLGKVESL 802
            +L N+   LG ++ L
Sbjct: 1069 QLNNLPRNLGSLQRL 1083



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 152/340 (44%), Gaps = 51/340 (15%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
            L+ L T+ +S    L + P I  S  +L KL LDG +S+ EV  SI  L  L LL L  C
Sbjct: 843  LEKLNTIRVSCSQHLIEIPDITVSAPNLQKLILDGCSSLLEVHPSIGKLNKLILLNLKNC 902

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            K L+  PS I+ +K+L+ LN SGC  L+  P+  G +E+L EL ++ TAI    SSI  +
Sbjct: 903  KKLICFPSIID-MKALEILNFSGCSGLKKFPNIQGNMENLFELYLASTAIEELPSSIGHL 961

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG-L 228
              L  L    C               NL    S P      S+  + SL  L LS C  L
Sbjct: 962  TGLVLLDLKWCK--------------NL---KSLPT-----SICKLKSLENLSLSGCSKL 999

Query: 229  GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN-- 286
            G  + P   +N+  LKEL L+      LP+SI  L  L  L L  CK L SL     N  
Sbjct: 1000 G--SFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLSNGMCNLT 1057

Query: 287  -LQFVRANGCSSLVTL---FGAL----KLCRSKYTIINCIDSLKLLRKNGLAISMLREYL 338
             L+ +  +GCS L  L    G+L    +L      I    DS+ LLR             
Sbjct: 1058 SLETLVVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRN------------ 1105

Query: 339  ELQAVSDPGHK-LSIVFPGSQIPKWFMYQNEGSSITVTRP 377
             LQ +  PG K L+    GS    W ++ N  + I +  P
Sbjct: 1106 -LQVLIYPGCKILAPTSLGSLFSFWLLHGNSSNGIGLRLP 1144



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/149 (41%), Positives = 91/149 (61%), Gaps = 5/149 (3%)

Query: 658  PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P++ +++ DG + + E+  +I  L  L+ L L  CK L   P  I  +K L  LN SG S
Sbjct: 868  PNLQKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIID-MKALEILNFSGCS 926

Query: 717  KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
              ++FP I  + + L E++L  TAI  LP+SI  L+G +L +LK CKNLKSLP++I  L+
Sbjct: 927  GLKKFPNIQGNMENLFELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLK 986

Query: 777  SLRMMYPSGCSKLKN---VTETLGKVESL 802
            SL  +  SGCSKL +   VTE + K++ L
Sbjct: 987  SLENLSLSGCSKLGSFPEVTENMDKLKEL 1015



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 5/139 (3%)

Query: 647  CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
            CS+L    E  +    + ++L DGT I  L  +I+ L GLV L L  CKNL  L   +  
Sbjct: 996  CSKLGSFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLVLLNLRKCKNLVSLSNGMCN 1055

Query: 704  LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
            L  L TL +SG S+    P    S  +L ++H +GTAI   P SI LL    +     CK
Sbjct: 1056 LTSLETLVVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCK 1115

Query: 764  NLKSLPSTINGLRSLRMMY 782
             L   P+++  L S  +++
Sbjct: 1116 ILA--PTSLGSLFSFWLLH 1132



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 11/192 (5%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + S++ L+ L+ DGT+I + P SI LL  L++L   GCK L+  P ++ SL     L  +
Sbjct: 1077 LGSLQRLAQLHADGTAIAQPPDSIVLLRNLQVLIYPGCKILA--PTSLGSLFSFWLLHGN 1134

Query: 61   GCSKLK-KFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
              + +  + P   +S   LS L L    + E  +P+ I  L  L+ L L++  N + +P+
Sbjct: 1135 SSNGIGLRLPSSFSSFRSLSNLDLSDCKLIEGAIPNGICSLISLKKLDLSQ-NNFLSIPA 1193

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLY 176
             I+ L +L+ L L  C  L  +P+      SL ++D    TA+   +SS+  ++ L+ L+
Sbjct: 1194 GISELTNLEDLRLGQCQSLTGIPEL---PLSLRDIDAHNCTALLPGSSSVSTLQGLQFLF 1250

Query: 177  FSGCNEPPASAS 188
            ++ C++P    S
Sbjct: 1251 YN-CSKPVEDQS 1261



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 3/118 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           +L+RL      L+ L+T+ +S      E P+IT S   L ++ L+G +++  +  SI  L
Sbjct: 832 SLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDITVSAPNLQKLILDGCSSLLEVHPSIGKL 891

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           +  IL NLK+CK L   PS I+ +++L ++  SGCS LK      G +E+L E+ L+S
Sbjct: 892 NKLILLNLKNCKKLICFPSIID-MKALEILNFSGCSGLKKFPNIQGNMENLFELYLAS 948


>gi|224120770|ref|XP_002330947.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222873141|gb|EEF10272.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1120

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 206/551 (37%), Positives = 290/551 (52%), Gaps = 79/551 (14%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  +  L+   L
Sbjct: 486 LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MGSLKVCIL 544

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M+ L  L LDGT I ++ SS+  L GL LL +N CKNL  +PSSI
Sbjct: 545 DGCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSI 604

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+ +P+ LG+VESLEE DVSGT+IR+  +SIFL+KNL+ L   G
Sbjct: 605 GCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDVSGTSIRQLPASIFLLKNLKVLSLDG 664

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                      +M PSL+G+CSL  L L  C L E A+P DI  
Sbjct: 665 FKR-----------------------IVMPPSLSGLCSLEVLGLCACNLREGALPEDIGC 701

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L L++NNFV+LP SI+ L  LE L LEDC  L+SLP++P  +Q V  NGC SL 
Sbjct: 702 LSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQTVCLNGCISLK 761

Query: 300 TLFGALKLCRSK---YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPG 356
           T+   + L  SK   +  +NC +      ++ + +++L  Y   Q +S+P     I  PG
Sbjct: 762 TIPDPINLSSSKISEFVCLNCWELYNHYGQDSMGLTLLERY--FQGLSNPRPGFGIAIPG 819

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           ++IP WF +Q++GSSI+V  PS+       +GF  C  F V   S   +           
Sbjct: 820 NEIPGWFNHQSKGSSISVQVPSW------SMGFVACVAFGVNGESPSLF----------- 862

Query: 417 CSMDGSGEGHY----IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRS 467
           C    +G  +Y    +        V+SDH+WL +L     +    WQ  S + I LSF S
Sbjct: 863 CHFKANGRENYPSSPMCISCNSIQVLSDHIWLFYLSFDYLKELQEWQHGSFSNIELSFHS 922

Query: 468 ISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQ----- 522
            S P  KVK CG   +              S+ + +  L+  H  F+ ++ EVA      
Sbjct: 923 -SQPGVKVKNCGVRLL--------------SSIYITPQLSSAH--FIVTSKEVASSFKAS 965

Query: 523 -ASGSGSSQWK 532
            A  S   QWK
Sbjct: 966 LAFSSSYHQWK 976



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 12/148 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  +        DGT I +LS ++  L GL  L++N CKNLE +P 
Sbjct: 547 CSKL----EKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPS 602

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E  + GT+IR LPASI LL    + +L
Sbjct: 603 SIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDVSGTSIRQLPASIFLLKNLKVLSL 662

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              K +  +P +++GL SL ++    C+
Sbjct: 663 DGFKRI-VMPPSLSGLCSLEVLGLCACN 689



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  +  L    L G SK  +FP+I  +   L+ + L+GT I 
Sbjct: 516 LQYMNLVNCKSIRILPNNLE-MGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGTGIT 574

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +S+  L G  L ++  CKNL+S+PS+I  L+SL+ +  SGCS+LK + E LG+VESL
Sbjct: 575 KLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESL 634

Query: 803 E 803
           E
Sbjct: 635 E 635



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 340 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----LDMPGI 387

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +      S +  L  L ++ + +  E PE  S++                    DQL
Sbjct: 388 KESQWNIEAFSKMSRLRLLKINNV-QLSEGPEDLSNKLQFLEWHSYPSKSLPVGLQVDQL 446

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  + +  L    +      + NL +   L   P  + G+ +L  +   GC+ L  
Sbjct: 447 VELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPD-LTGIPNLESLILEGCTSLSE 505

Query: 792 VTETLGKVESLE 803
           V  +L   + L+
Sbjct: 506 VHPSLAHHKKLQ 517


>gi|296081000|emb|CBI18504.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 199/536 (37%), Positives = 294/536 (54%), Gaps = 45/536 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L +L+L  T+I E+PSSI  +T L LL LK CKNL SLP +I  LK L  L LSGCS
Sbjct: 1   MDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCS 60

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           KL+ FP+++  ME+L +L LDGTSI  +PSSI+ L GL LL + +C+NLV LP  +  L 
Sbjct: 61  KLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLT 120

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN-- 181
           SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC   
Sbjct: 121 SLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKIL 180

Query: 182 EPPASAS----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSD 236
            P +  S    W +H        SS  V L LP S     S T LDLSD  L E AIP+D
Sbjct: 181 APTSLGSLFSFWLMH------RNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGAIPND 234

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           I +L SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ V A+ C+
Sbjct: 235 ICSLISLKKLDLSRNNFLSIPAGISQLTNLKDLRLGHCQSLIIIPELPPSIRDVDAHNCT 294

Query: 297 SLV-TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR-EYLELQAVSDPGHKLSIVF 354
           +L  T      L   ++   NC   ++    +    ++ R  + + Q + +     SIVF
Sbjct: 295 ALFPTSSSVCTLQGLQFLFYNCSKPVEDQSSDQKRNALQRFPHNDAQKLLE-NIAFSIVF 353

Query: 355 PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ------VPKHSTGTYLFH 408
           PGS IP+W  +QN GS I +  P+  YN +  +GF +C + +      + + ++  + + 
Sbjct: 354 PGSGIPEWIWHQNVGSFIKIELPTDWYN-DDFLGFVLCSILEHLPERIICRLNSDVFYYG 412

Query: 409 SYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLP-RHGHNWQFES----NLIRL 463
            +              GH  +++G    + S+H+WL + P      +QF      N I +
Sbjct: 413 DF-----------KDIGHDFHWKGDI--LGSEHVWLGYQPCSQLRLFQFNDPNDWNYIEI 459

Query: 464 SF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVG 515
           SF    R  S  +  VK+CG   IY  ++E      ++  +   CN+ E   D  G
Sbjct: 460 SFEAAHRFNSSASNVVKKCGVCLIYAEDLEGIHLQNRKQLKSRGCNVVERSSDRDG 515



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 82/135 (60%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I EL  +I  +  LV L L  CKNL+ LP +I  LK L  L LSG SK   FPE+   
Sbjct: 12  TAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCSKLENFPEVMVD 71

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L E+ L+GT+I GLP+SI+ L G +L N++ C+NL SLP  +  L SL  +  SGCS
Sbjct: 72  MENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLTSLETLIVSGCS 131

Query: 788 KLKNVTETLGKVESL 802
           +L N+   LG ++ L
Sbjct: 132 QLNNLPRNLGSLQRL 146



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 28/247 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M++L +L LDGTSI  +PSSI+ L GL LL ++ C+NL SLP  +  L  L TL +S
Sbjct: 69  MVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLTSLETLIVS 128

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-------- 112
           GCS+L   P+ + S++ L++L+ DGT+I + P SI LL  L++L    CK L        
Sbjct: 129 GCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKILAPTSLGSL 188

Query: 113 ---------------VRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSG 156
                          +RLPSS    +S   L+LS    +E  +P+ +  + SL++LD+S 
Sbjct: 189 FSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGAIPNDICSLISLKKLDLSR 248

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
                  + I  + NL+ L    C     S      LP ++    +     + P+ + VC
Sbjct: 249 NNFLSIPAGISQLTNLKDLRLGHCQ----SLIIIPELPPSIRDVDAHNCTALFPTSSSVC 304

Query: 217 SLTKLDL 223
           +L  L  
Sbjct: 305 TLQGLQF 311



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 54/75 (72%)

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D LLE+HL  TAI  LP+SI  ++  +L +LK CKNLKSLP++I  L+SL  ++ SGCSK
Sbjct: 2   DHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSGCSK 61

Query: 789 LKNVTETLGKVESLE 803
           L+N  E +  +E+L+
Sbjct: 62  LENFPEVMVDMENLK 76



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 13/143 (9%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+++       ++L DGT I  L  +I+ L GLV L +  C+NL  LP+
Sbjct: 59  CSKL----ENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPK 114

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +  L  L TL +SG S+    P    S  +L ++H +GTAI   P SI LL    +   
Sbjct: 115 GMCKLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIY 174

Query: 760 KDCKNLKSLPSTINGLRSLRMMY 782
             CK L   P+++  L S  +M+
Sbjct: 175 PGCKILA--PTSLGSLFSFWLMH 195


>gi|359493269|ref|XP_003634556.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1299

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 204/559 (36%), Positives = 298/559 (53%), Gaps = 71/559 (12%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M  L +L+L  T+I E+PSSI  +T L LL LK CKNL SLP +I  LK L  L LSG
Sbjct: 735  GNMDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLEYLFLSG 794

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP+++  ME+L +L LDGTSI  +PSSI+ L GL LL + +C+NLV LP  +  
Sbjct: 795  CSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCK 854

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC +L N+P  LG ++ L +L   GTAI +P  SI L++NL+ L + GC 
Sbjct: 855  LTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCK 914

Query: 182  --EPPASAS----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP 234
               P +  S    W +H        SS  V L LP S     S T LDLSD  L E AIP
Sbjct: 915  ILAPTSLGSLFSFWLMH------RNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGAIP 968

Query: 235  SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
            +DI +L SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ V A+ 
Sbjct: 969  NDICSLISLKKLDLSRNNFLSIPAGISQLTNLKDLRLGHCQSLIIIPELPPSIRDVDAHN 1028

Query: 295  CSSLV-TLFGALKLCRSKYTIINCI----DSLKLLRKNGL------------------AI 331
            C++L  T      L   ++   NC     D     ++N L                    
Sbjct: 1029 CTALFPTSSSVCTLQGLQFLFYNCSKPVEDQSSDQKRNALQRFPHNDASSSASVSSVTTS 1088

Query: 332  SMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
             ++R+ L L+ ++      SIVFPGS IP+W  +QN GS I +  P+  YN +  +GF +
Sbjct: 1089 PVVRQKL-LENIA-----FSIVFPGSGIPEWIWHQNVGSFIKIELPTDWYN-DDFLGFVL 1141

Query: 392  CCVFQ------VPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLL 445
            C + +      + + ++  + +            D    GH  +++G    + S+H+WL 
Sbjct: 1142 CSILEHLPERIICRLNSDVFYYG-----------DFKDIGHDFHWKGDI--LGSEHVWLG 1188

Query: 446  FLP-RHGHNWQFES----NLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTK 496
            + P      +QF      N I +SF    R  S  +  VK+CG   IY  ++E      +
Sbjct: 1189 YQPCSQLRLFQFNDPNDWNYIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLEGIHLQNR 1248

Query: 497  QSTRFTSCNLNEVHHDFVG 515
            +  +   CN+ E   D  G
Sbjct: 1249 KQLKSRGCNVVERSSDRDG 1267



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/276 (39%), Positives = 145/276 (52%), Gaps = 31/276 (11%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L LDG +S+  +  SI  L+ L LL LK CK LSS P +I  +K L  L  SGCS 
Sbjct: 668 NLEKLILDGCSSLLILHPSIGKLSKLILLNLKNCKKLSSFP-SIIDMKALEILNFSGCSG 726

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LKKFP I  +M+ L +L+L  T+I E+PSSI  +  L LL L  CKNL  LP+SI  LKS
Sbjct: 727 LKKFPDIRGNMDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKS 786

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L+ L LSGC KLEN P+ +  +E+L+EL + GT+I    SSI  +K L            
Sbjct: 787 LEYLFLSGCSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLV----------- 835

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLH 241
                       LL    C   + LP   G+C LT L+   +S C      +P ++ +L 
Sbjct: 836 ------------LLNMRKCQNLVSLPK--GMCKLTSLETLIVSGCS-QLNNLPRNLGSLQ 880

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            L +L+ +       P SI  L NL+ L    CK L
Sbjct: 881 RLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKIL 916



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 7/154 (4%)

Query: 656 EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +FPDI       +++    T I EL  +I  +  LV L L  CKNL+ LP +I  LK L 
Sbjct: 729 KFPDIRGNMDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLKSLE 788

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
            L LSG SK   FPE+    + L E+ L+GT+I GLP+SI+ L G +L N++ C+NL SL
Sbjct: 789 YLFLSGCSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSL 848

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P  +  L SL  +  SGCS+L N+   LG ++ L
Sbjct: 849 PKGMCKLTSLETLIVSGCSQLNNLPRNLGSLQRL 882



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 92/147 (62%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ DG + +  L  +I  L  L+ L L  CK L   P  I  +K L  LN SG S
Sbjct: 667 PNLEKLILDGCSSLLILHPSIGKLSKLILLNLKNCKKLSSFPSIID-MKALEILNFSGCS 725

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             ++FP+I  + D LLE+HL  TAI  LP+SI  ++  +L +LK CKNLKSLP++I  L+
Sbjct: 726 GLKKFPDIRGNMDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSICRLK 785

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  ++ SGCSKL+N  E +  +E+L+
Sbjct: 786 SLEYLFLSGCSKLENFPEVMVDMENLK 812



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 28/247 (11%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M  M++L +L LDGTSI  +PSSI+ L GL LL ++ C+NL SLP  +  L  L TL +S
Sbjct: 805  MVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPKGMCKLTSLETLIVS 864

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-------- 112
            GCS+L   P+ + S++ L++L+ DGT+I + P SI LL  L++L    CK L        
Sbjct: 865  GCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIYPGCKILAPTSLGSL 924

Query: 113  ---------------VRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSG 156
                           +RLPSS    +S   L+LS    +E  +P+ +  + SL++LD+S 
Sbjct: 925  FSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEGAIPNDICSLISLKKLDLSR 984

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
                   + I  + NL+ L    C     S      LP ++    +     + P+ + VC
Sbjct: 985  NNFLSIPAGISQLTNLKDLRLGHCQ----SLIIIPELPPSIRDVDAHNCTALFPTSSSVC 1040

Query: 217  SLTKLDL 223
            +L  L  
Sbjct: 1041 TLQGLQF 1047



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 13/143 (9%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+++       ++L DGT I  L  +I+ L GLV L +  C+NL  LP+
Sbjct: 795 CSKL----ENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLVLLNMRKCQNLVSLPK 850

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +  L  L TL +SG S+    P    S  +L ++H +GTAI   P SI LL    +   
Sbjct: 851 GMCKLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNLQVLIY 910

Query: 760 KDCKNLKSLPSTINGLRSLRMMY 782
             CK L   P+++  L S  +M+
Sbjct: 911 PGCKILA--PTSLGSLFSFWLMH 931



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 26/163 (15%)

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDC 762
           L+ L+T+ LS      E P+I+     L ++ L+G +++  L  SI  LS  IL NLK+C
Sbjct: 642 LEKLNTIRLSCSQHLIEIPDISICAPNLEKLILDGCSSLLILHPSIGKLSKLILLNLKNC 701

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES-LEVRLSSWNRPKMQNDFDCV 821
           K L S PS I+ +++L ++  SGCS LK   +  G ++  LE+ L+S            +
Sbjct: 702 KKLSSFPSIID-MKALEILNFSGCSGLKKFPDIRGNMDHLLELHLAS----------TAI 750

Query: 822 EQ--SAVETVTKLAKAELLRDSDSWKKNVDKCMKLSTTATSAC 862
           E+  S++  +T+L   +L R           C  L +  TS C
Sbjct: 751 EELPSSIGHITRLVLLDLKR-----------CKNLKSLPTSIC 782


>gi|359486075|ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 192/504 (38%), Positives = 281/504 (55%), Gaps = 37/504 (7%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M +LS+L L GT+I  +P SIE L GL L  L+ CK+L SLP  I  LK L+TL LS 
Sbjct: 739  GAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCIFKLKSLKTLILSN 798

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            C +LKK P+I  +ME L +L+LD T + E+PSSIE L GL LL L  CK L  LP SI  
Sbjct: 799  CLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICK 858

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL LSGC +L+ +PD +G ++ L +L  +G+ I+   SSI L+  L+ L  +GC 
Sbjct: 859  LTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGC- 917

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
            +   S S +L L      ++S    L L SLT + SL KL+LSD  L E A+PSD+ +L 
Sbjct: 918  KGGGSKSRNLALSL----RASPTDGLRLSSLTVLHSLKKLNLSDRNLLEGALPSDLSSLS 973

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
             L+ L L+RNNF+T+P S+S L +L  L +E CK LQSLP++P +++ + AN C+SL T 
Sbjct: 974  WLECLDLSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETF 1033

Query: 302  ------FGALKLCRSKYTIINCI--------DSLK-LLRKNGLAISMLREYLELQAVSDP 346
                  +   K     +   NC         D+++ +L++  L  S+ +     +  +  
Sbjct: 1034 SYPSSAYPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEHSARY 1093

Query: 347  GH-KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY 405
            G  +   V PGS+IP+WF +Q+EG SITV  P   YN N  +G A C VF  PK S G  
Sbjct: 1094 GESRYDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNS-IGLAACAVFH-PKFSMGKI 1151

Query: 406  LFHSYPA--HELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRL 463
               +Y +       S+D +   H+           +DH+W  +    G + +   + +++
Sbjct: 1152 GRSAYFSVNESGGFSLDNTTSMHF---------SKADHIWFGYRLISGVDLR---DHLKV 1199

Query: 464  SFRSISDPTWKVKRCGFHPIYMHE 487
            +F +   P   VK+CG   +Y  +
Sbjct: 1200 AFATSKVPGEVVKKCGVRLVYEQD 1223



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 85/136 (62%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I+ L L+IE L GL    L  CK+LE LP  I  LK L TL LS   + ++ PEI  
Sbjct: 751 GTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCIFKLKSLKTLILSNCLRLKKLPEIQE 810

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           + + L E+ L+ T +R LP+SIE L+G +L  LK+CK L SLP +I  L SL+ +  SGC
Sbjct: 811 NMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGC 870

Query: 787 SKLKNVTETLGKVESL 802
           S+LK + + +G ++ L
Sbjct: 871 SELKKLPDDMGSLQCL 886



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 93/147 (63%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ +G T + ++  +I  L  L+ L L GCKNL+    +I  L+ L  L LSG S
Sbjct: 671 PKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIH-LESLQILTLSGCS 729

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++ PE+  + D L E+ L+GTAI+GLP SIE L+G  L NL++CK+L+SLP  I  L+
Sbjct: 730 KLKKLPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCIFKLK 789

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  S C +LK + E    +ESL+
Sbjct: 790 SLKTLILSNCLRLKKLPEIQENMESLK 816



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 133/323 (41%), Gaps = 79/323 (24%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  LY DG  +  +PS+       +LL LK C   L  L     S + L+ +ELS    L
Sbjct: 605 LRSLYWDGYPLKSLPSNFH---PEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHL 661

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            K P    +                        P L  + L  C +LV++  SI  LK L
Sbjct: 662 IKAPDFSGA------------------------PKLRRIILEGCTSLVKVHPSIGALKKL 697

Query: 126 KTLN-----------------------LSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
             LN                       LSGC KL+ +P+  G +++L EL + GTAI+  
Sbjct: 698 IFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLKKLPEVQGAMDNLSELSLKGTAIKGL 757

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKL 221
             SI  +  L                      FNL     C     LP  +  + SL  L
Sbjct: 758 PLSIEYLNGLA--------------------LFNL---EECKSLESLPGCIFKLKSLKTL 794

Query: 222 DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            LS+C L    +P   +N+ SLKEL+L+      LP+SI  L  L  L+L++CKRL SLP
Sbjct: 795 ILSNC-LRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLP 853

Query: 282 QIP---PNLQFVRANGCSSLVTL 301
           +      +LQ +  +GCS L  L
Sbjct: 854 ESICKLTSLQTLTLSGCSELKKL 876



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NC RL    E  +    + ++  D T +REL  +IE L GLV L L  CK L  LP +I 
Sbjct: 798 NCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESIC 857

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            L  L TL LSG S+ ++ P+   S   LL++   G+ I+ +P+SI LL+   + +L  C
Sbjct: 858 KLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGC 917

Query: 763 K 763
           K
Sbjct: 918 K 918



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 18/143 (12%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS------LPVTISSLKCL 54
            M S++ L  L  +G+ I EVPSSI LLT L++L+L GCK   S      L +  S    L
Sbjct: 880  MGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGGSKSRNLALSLRASPTDGL 939

Query: 55   RTLELSGCSKLKK------------FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
            R   L+    LKK             P  ++S+  L  L L   +   VP+S+  LP L 
Sbjct: 940  RLSSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFITVPTSLSRLPHLR 999

Query: 103  LLYLNECKNLVRLPSSINGLKSL 125
             L +  CKNL  LP   + +K L
Sbjct: 1000 RLIVEHCKNLQSLPELPSSIKEL 1022


>gi|359493293|ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 187/510 (36%), Positives = 280/510 (54%), Gaps = 40/510 (7%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            M++L +L L+GT+I E+P S+  L  L LL +K CKNL  LP  I SLK L TL LSGCS
Sbjct: 717  MENLLELNLEGTAIVELPPSVVFLPRLVLLDMKNCKNLMILPSNIYSLKSLGTLVLSGCS 776

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
             L+ FP+I+  ME L +L LDGTSI E+  SI  L GL+LL + +CKNL  LP+SI  L+
Sbjct: 777  GLEIFPEIMEDMECLQELLLDGTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLR 836

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            SL+TL +SGC KL  +P+ LG+++ L +L   GTAI +P  S+F ++NL+ L F  C + 
Sbjct: 837  SLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRRC-KG 895

Query: 184  PASASWHLHLPFNLLGK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
              S SW   L F LL + +S    L LP L+G+ SL  LDLS C L + +I  ++ +L  
Sbjct: 896  STSNSWISSLLFRLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLRF 955

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            L+EL L+RNN VT+P  ++ L +L  + +  CK LQ + ++PP+++ + A  C SL +L 
Sbjct: 956  LEELNLSRNNLVTVPEEVNRLSHLRVISVNQCKSLQEISKLPPSIKLLDAGDCISLESLS 1015

Query: 303  GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD---PGHKLSIVFPGSQI 359
                      +  +C+  +     N  A++       L+ +     P  + SIV PGS I
Sbjct: 1016 VLSPQSPQFLSSSSCLRLVTFKLPNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTI 1075

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
            P+WF + + GSS+T+  P   +N +  +GFA+C VF + +                   +
Sbjct: 1076 PEWFQHPSIGSSVTIELPPNWHNKD-FLGFALCSVFSLEEDEI----------------I 1118

Query: 420  DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQF-------ESNLIRLSFRSISDPT 472
             G  E  ++         + DH+WL++ P  G            +S  I   F S+S  +
Sbjct: 1119 QGPAETEWLR--------LIDHIWLVYQP--GAKLMIPKSSSPNKSRKITAYF-SLSGAS 1167

Query: 473  WKVKRCGFHPIYMHEVEEFDETTKQSTRFT 502
              VK CG H IY  + +   +T ++ +RFT
Sbjct: 1168 HVVKNCGIHLIYARDKKVNHQTRRKESRFT 1197



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 143/270 (52%), Gaps = 31/270 (11%)

Query: 10  LYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L LDG TS+ EV  S+  L  L +L +K CK L   P +I+ L+ L  L LSGCSK+ KF
Sbjct: 652 LILDGCTSLPEVHPSVTKLKRLTILNVKNCKMLHYFP-SITGLESLEVLNLSGCSKIDKF 710

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           P+I   ME+L +L L+GT+I E+P S+  LP L LL +  CKNL+ LPS+I  LKSL TL
Sbjct: 711 PEIQGCMENLLELNLEGTAIVELPPSVVFLPRLVLLDMKNCKNLMILPSNIYSLKSLGTL 770

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
            LSGC  LE  P+ +  +E L+EL + GT+I+  + SI  +K L+               
Sbjct: 771 VLSGCSGLEIFPEIMEDMECLQELLLDGTSIKELSPSIVHLKGLQ--------------- 815

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLHSLKE 245
                   LL    C     LP+   +CSL  L+   +S C    + +P D+  L  L +
Sbjct: 816 --------LLNMRKCKNLRSLPN--SICSLRSLETLIVSGCS-KLSKLPEDLGRLQFLMK 864

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCK 275
           L  +       P S+  L NL+EL    CK
Sbjct: 865 LQADGTAITQPPLSLFHLRNLKELSFRRCK 894



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 108/203 (53%), Gaps = 23/203 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L +L LDGTSI E+  SI  L GL+LL ++ CKNL SLP +I SL+ L TL +S
Sbjct: 785 MEDMECLQELLLDGTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLRSLETLIVS 844

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN--------- 111
           GCSKL K P+ +  ++ L KL  DGT+I + P S+  L  L+ L    CK          
Sbjct: 845 GCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRRCKGSTSNSWISS 904

Query: 112 -LVRLPSSIN------------GLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGT 157
            L RL    N            GL SLK L+LSGC   + ++ D LG +  LEEL++S  
Sbjct: 905 LLFRLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLEELNLSRN 964

Query: 158 AIRRPTSSIFLMKNLRSLYFSGC 180
            +      +  + +LR +  + C
Sbjct: 965 NLVTVPEEVNRLSHLRVISVNQC 987



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 95/163 (58%), Gaps = 11/163 (6%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS++    D+FP+I   +        +GT I EL  ++  L  LV L +  CKNL  LP 
Sbjct: 704 CSKI----DKFPEIQGCMENLLELNLEGTAIVELPPSVVFLPRLVLLDMKNCKNLMILPS 759

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I +LK L TL LSG S    FPEI    + L E+ L+GT+I+ L  SI  L G  L N+
Sbjct: 760 NIYSLKSLGTLVLSGCSGLEIFPEIMEDMECLQELLLDGTSIKELSPSIVHLKGLQLLNM 819

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           + CKNL+SLP++I  LRSL  +  SGCSKL  + E LG+++ L
Sbjct: 820 RKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQFL 862



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ DG T + E+  ++  L  L  L +  CK L   P +I+ L+ L  LNLSG S
Sbjct: 647 PRVERLILDGCTSLPEVHPSVTKLKRLTILNVKNCKMLHYFP-SITGLESLEVLNLSGCS 705

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FPEI    + LLE++LEGTAI  LP S+  L   +L ++K+CKNL  LPS I  L+
Sbjct: 706 KIDKFPEIQGCMENLLELNLEGTAIVELPPSVVFLPRLVLLDMKNCKNLMILPSNIYSLK 765

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  +  SGCS L+   E +  +E L+
Sbjct: 766 SLGTLVLSGCSGLEIFPEIMEDMECLQ 792



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 32/178 (17%)

Query: 657 FPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++       +L DGT I+ELS +I  L GL  L +  CKNL  LP +I +L+ L T
Sbjct: 781 FPEIMEDMECLQELLLDGTSIKELSPSIVHLKGLQLLNMRKCKNLRSLPNSICSLRSLET 840

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS-- 767
           L +SG SK  + PE       L+++  +GTAI   P S+  L      + + CK   S  
Sbjct: 841 LIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRRCKGSTSNS 900

Query: 768 ---------------------LPSTINGLRSLRMMYPSGCSKL-KNVTETLGKVESLE 803
                                LP  ++GL SL+ +  SGC+   +++ + LG +  LE
Sbjct: 901 WISSLLFRLLHRENSDGTGLQLP-YLSGLYSLKYLDLSGCNLTDRSINDNLGHLRFLE 957


>gi|451798988|gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 183/498 (36%), Positives = 270/498 (54%), Gaps = 44/498 (8%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M+ L +L L+GT+I  +P SIE LTGL LL LK CK+L SLP +I  LK L+TL LS 
Sbjct: 737  GNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSN 796

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            C++LKK P+I  +ME L +L+LDG+ I E+PSSI  L GL  L L  CK L  LP S   
Sbjct: 797  CTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCE 856

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL TL L GC +L+ +PD LG ++ L EL+  G+ I+    SI L+ NL+ L  +GC 
Sbjct: 857  LTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGC- 915

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
            +   S S ++   F+    SS    L LPS +G+ SL  L L  C L E A+PSD+ ++ 
Sbjct: 916  KGGDSKSRNMVFSFH----SSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIP 971

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            SL+ L L+RN+F+T+PAS+SGL  L  L LE CK LQSLP++P +++ + A+ C+SL T 
Sbjct: 972  SLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETF 1031

Query: 302  ------FGALKLCRSKYTIINCI--------DSLKLLRKNGLAISMLREYLELQAVSDPG 347
                  + + K    ++   NC         D +  + +    +S + ++L    +  P 
Sbjct: 1032 SCSSGAYTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPWGIPTPH 1091

Query: 348  HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
            ++ + + PGS+IP+WF +Q+ G S+ +  P + YN  K++G A C          G    
Sbjct: 1092 NEYNALVPGSRIPEWFRHQSVGCSVNIELPPHWYNT-KLMGLAFCAALNFKGAMDG---- 1146

Query: 408  HSYPAHEL----------ECSMDGSGEGHYIYFRG-KFGHVVSDHLWLLFLPRHGHNWQF 456
              YP  E           +C ++      Y    G KF  + SDH    ++      W+ 
Sbjct: 1147 --YPGTEPSSFGLVCYLNDCFVETGLHSLYTPLEGSKF--IESDHTLFEYISLARERWR- 1201

Query: 457  ESNLIRLSFRSISDPTWK 474
                ++LSFR      W+
Sbjct: 1202 ----MQLSFRHHVAGRWR 1215



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/137 (44%), Positives = 87/137 (63%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +GT I+ L L+IE L GL  L L  CK+LE LPR+I  LK L TL LS  ++ ++ PEI 
Sbjct: 748 EGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQ 807

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            + + L+E+ L+G+ I  LP+SI  L+G +  NLK+CK L SLP +   L SL  +   G
Sbjct: 808 ENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCG 867

Query: 786 CSKLKNVTETLGKVESL 802
           CS+LK + + LG ++ L
Sbjct: 868 CSELKELPDDLGSLQCL 884



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 93/146 (63%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G T + E+  +I  L  L+ L L GCK L+    +I  ++ L  L LSG S
Sbjct: 669 PNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCS 727

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  + + L  + LEGTAI+GLP SIE L+G  L NLK+CK+L+SLP +I  L+
Sbjct: 728 KLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLK 787

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL+ +  S C++LK + E    +ESL
Sbjct: 788 SLKTLILSNCTRLKKLPEIQENMESL 813



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 5/231 (2%)

Query: 55  RTLELSGC-SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           + +EL+ C S+LK+  +     E L  + L  +           +P L  L L  C +LV
Sbjct: 624 KLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLV 683

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNL 172
            +  SI  LK L  LNL GC KL++   ++  +ESL+ L +SG + +++       M++L
Sbjct: 684 EVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEVQGNMEHL 742

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEA 231
            +L   G        S        LL    C     LP S+  + SL  L LS+C   + 
Sbjct: 743 PNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLK- 801

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +P   +N+ SL EL+L+ +  + LP+SI  L  L  L L++CK+L SLPQ
Sbjct: 802 KLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQ 852



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 87/180 (48%), Gaps = 23/180 (12%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NC+RL    E  +    ++++  DG+ I EL  +I  L GLV L L  CK L  LP++  
Sbjct: 796 NCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFC 855

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            L  L TL L G S+ +E P+   S   L E++ +G+ I+ +P SI LL+     +L  C
Sbjct: 856 ELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGC 915

Query: 763 KNLKS------------------LPSTINGLRSLRMMYPSGCSKLKNVTET-LGKVESLE 803
           K   S                  LPS  +GL SLR++    C+  +    + LG + SLE
Sbjct: 916 KGGDSKSRNMVFSFHSSPTEELRLPS-FSGLYSLRVLILQRCNLSEGALPSDLGSIPSLE 974



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 10/183 (5%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + S++ L++L  DG+ I EVP SI LLT L+ L+L GCK   S      S   + +   S
Sbjct: 878  LGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDS-----KSRNMVFSFHSS 932

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPSS 118
               +L + P   + +  L  L L   +++E  +PS +  +P LE L L+   + + +P+S
Sbjct: 933  PTEEL-RLPSF-SGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSR-NSFITIPAS 989

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
            ++GL  L++L L  C  L+++P+    VESL     +       +S  +  K    L F+
Sbjct: 990  LSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFSCSSGAYTSKKFGDLRFN 1049

Query: 179  GCN 181
              N
Sbjct: 1050 FTN 1052


>gi|225465768|ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 189/509 (37%), Positives = 279/509 (54%), Gaps = 29/509 (5%)

Query: 10   LYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
            L LDG TS+ EV  S+  L  L +L +K CK L   P +I+ L+ L+ L LSGCSKL KF
Sbjct: 654  LILDGCTSLPEVHPSVTKLKRLTILNMKNCKKLHYFP-SITGLESLKVLNLSGCSKLDKF 712

Query: 69   PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
            P+I+  ME L KL LDGTS+ E+P SI  + GL+LL L +CKNL  LP+SI  L+SL+TL
Sbjct: 713  PEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSICSLRSLETL 772

Query: 129  NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
             +SGC KL  +P+ LG+++ L +L   GTAI +P  S+F ++NL+ L F GC +   S S
Sbjct: 773  IVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRGC-KGSTSNS 831

Query: 189  WHLHLPFNLLGK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
            W   L F LL + +S    L LP L+G+ SL  LDLS C L + +I  ++ +L  L+EL 
Sbjct: 832  WISSLLFRLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLSFLEELN 891

Query: 248  LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
            L+RNN VT+PA ++ L +L  L +  CK LQ + ++PP+++ + A  C SL +L      
Sbjct: 892  LSRNNLVTVPAEVNRLSHLRVLSVNQCKSLQEISKLPPSIKLLDAGDCISLESLSVLSPQ 951

Query: 308  CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD---PGHKLSIVFPGSQIPKWFM 364
                 +  +C+  +     N  A++       L+ +     P  + SIV PGS IP+WF 
Sbjct: 952  SPQYLSSSSCLRPVTFKLPNCFALAQDNGATILEKLRQNFLPEIEYSIVLPGSTIPEWFQ 1011

Query: 365  YQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE 424
            + + GSS+T+  P   +N +  +GFA+C VF + +               L C      E
Sbjct: 1012 HPSIGSSVTIELPPNWHNKD-FLGFALCSVFSLEEDEI-------IQGSGLVCCNFEFRE 1063

Query: 425  GHYIYFRGKFGH-----VVSDHLWLLFLPRHGHNWQFESNLIRL----SFRSISDPTWKV 475
            G Y+     + H     + +DH+WL++ P         S+L +     ++ S+S  +  V
Sbjct: 1064 GPYLSSSISWTHSGDRVIETDHIWLVYQPGAKLMIPKSSSLNKFRKITAYFSLSGASHVV 1123

Query: 476  KRCGFHPIYMHEVEEFDETTKQSTRFTSC 504
            K CG H IY       D+     TR+TS 
Sbjct: 1124 KNCGIHLIYAR-----DKKVNYQTRYTSA 1147



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 23/203 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L LDGTS+ E+P SI  + GL+LL L+ CKNL SLP +I SL+ L TL +S
Sbjct: 716 MEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSICSLRSLETLIVS 775

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN--------- 111
           GCSKL K P+ +  ++ L KL  DGT+I + P S+  L  L+ L    CK          
Sbjct: 776 GCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRGCKGSTSNSWISS 835

Query: 112 -LVRLPSSIN------------GLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGT 157
            L RL    N            GL SLK L+LSGC   + ++ D LG +  LEEL++S  
Sbjct: 836 LLFRLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSINDNLGHLSFLEELNLSRN 895

Query: 158 AIRRPTSSIFLMKNLRSLYFSGC 180
            +    + +  + +LR L  + C
Sbjct: 896 NLVTVPAEVNRLSHLRVLSVNQC 918



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 89/146 (60%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P +  ++ DG T + E+  ++  L  L  L +  CK L   P +I+ L+ L  LNLSG S
Sbjct: 649 PRVELLILDGCTSLPEVHPSVTKLKRLTILNMKNCKKLHYFP-SITGLESLKVLNLSGCS 707

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FPEI    + L ++ L+GT+++ LP SI  + G  L NL+ CKNL+SLP++I  LR
Sbjct: 708 KLDKFPEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPNSICSLR 767

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL  +  SGCSKL  + E LG+++ L
Sbjct: 768 SLETLIVSGCSKLSKLPEDLGRLQFL 793



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 36/188 (19%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    D+FP+I++V+        DGT ++EL  +I  + GL  L L  CKNL  LP 
Sbjct: 706 CSKL----DKFPEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKCKNLRSLPN 761

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I +L+ L TL +SG SK  + PE       L+++  +GTAI   P S+  L      + 
Sbjct: 762 SICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSF 821

Query: 760 KDCKNLKS-----------------------LPSTINGLRSLRMMYPSGCSKL-KNVTET 795
           + CK   S                       LP  ++GL SL+ +  SGC+   +++ + 
Sbjct: 822 RGCKGSTSNSWISSLLFRLLHRENSDGTGLQLP-YLSGLYSLKYLDLSGCNLTDRSINDN 880

Query: 796 LGKVESLE 803
           LG +  LE
Sbjct: 881 LGHLSFLE 888



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 78/296 (26%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  L+ DG ++  +PS+ +    +EL +LK     SSL       KCL  LE+      
Sbjct: 582 ELRYLHWDGWTLESLPSNFDGWKLVEL-SLKH----SSLKHLWKKRKCLPKLEVINLG-- 634

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRL-PS------- 117
                             +   + E P+ +   P +ELL L+ C +L  + PS       
Sbjct: 635 ------------------NSQHLMECPN-LSFAPRVELLILDGCTSLPEVHPSVTKLKRL 675

Query: 118 ---------------SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
                          SI GL+SLK LNLSGC KL+  P+ +  +E L++L + GT+++  
Sbjct: 676 TILNMKNCKKLHYFPSITGLESLKVLNLSGCSKLDKFPEIMEVMECLQKLLLDGTSLKEL 735

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
             SI  +K L+                       LL    C     LP+   +CSL  L+
Sbjct: 736 PPSIVHVKGLQ-----------------------LLNLRKCKNLRSLPN--SICSLRSLE 770

Query: 223 ---LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
              +S C    + +P D+  L  L +L  +       P S+  L NL+EL    CK
Sbjct: 771 TLIVSGCS-KLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLKELSFRGCK 825



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 6/125 (4%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT-SSRDQLLEIHLEG- 738
           + LV+L+L    +L+ L +    L  L  +NL       E P ++ + R +LL   L+G 
Sbjct: 603 WKLVELSLKH-SSLKHLWKKRKCLPKLEVINLGNSQHLMECPNLSFAPRVELLI--LDGC 659

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T++  +  S+  L    + N+K+CK L   PS I GL SL+++  SGCSKL    E +  
Sbjct: 660 TSLPEVHPSVTKLKRLTILNMKNCKKLHYFPS-ITGLESLKVLNLSGCSKLDKFPEIMEV 718

Query: 799 VESLE 803
           +E L+
Sbjct: 719 MECLQ 723


>gi|147770134|emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 191/501 (38%), Positives = 279/501 (55%), Gaps = 37/501 (7%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M +LS+L L GT+I  +P SIE L GL L  L+ CK+L SLP     LK L+TL LS 
Sbjct: 712  GAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCXFKLKSLKTLILSN 771

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            C +LKK P+I  +ME L +L+LD T + E+PSSIE L GL LL L  CK L  LP SI  
Sbjct: 772  CLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICK 831

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL LSGC +L+ +PD +G ++ L +L  +G+ I+   SSI L+  L+ L  +GC 
Sbjct: 832  LTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGC- 890

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
            +   S S +L L      ++S    L L SLT + SL KL+LSD  L E A+PSD+ +L 
Sbjct: 891  KGGGSKSRNLALSL----RASPTDGLRLSSLTVLHSLKKLNLSDRNLLEGALPSDLSSLS 946

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
             L+ L L+RNNF+T+P S+S L +L  L +E CK LQSLP++P +++ + AN C+SL T 
Sbjct: 947  WLECLDLSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETF 1006

Query: 302  ------FGALKLCRSKYTIINCI--------DSLK-LLRKNGLAISMLREYLELQAVSDP 346
                  +   K     +   NC         D+++ +L++  L  S+ +     +  +  
Sbjct: 1007 SYPSSAYPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEHSARY 1066

Query: 347  GH-KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY 405
            G  +   V PGS+IP+WF +Q+EG SITV  P   YN N  +G A C VF  PK S G  
Sbjct: 1067 GESRYDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNS-IGLAACAVFH-PKFSMGKI 1124

Query: 406  LFHSYPA--HELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRL 463
               +Y +       S+D +   H+           +DH+W  +    G + +   + +++
Sbjct: 1125 GRSAYFSVNESGGFSLDNTTSMHF---------SKADHIWFGYRLISGVDLR---DHLKV 1172

Query: 464  SFRSISDPTWKVKRCGFHPIY 484
            +F +   P   VK+CG   +Y
Sbjct: 1173 AFATSKVPGEVVKKCGVRLVY 1193



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 84/136 (61%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I+ L L+IE L GL    L  CK+LE LP     LK L TL LS   + ++ PEI  
Sbjct: 724 GTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCXFKLKSLKTLILSNCLRLKKLPEIQE 783

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           + + L E+ L+ T +R LP+SIE L+G +L  LK+CK L SLP +I  L SL+ +  SGC
Sbjct: 784 NMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESICKLTSLQTLTLSGC 843

Query: 787 SKLKNVTETLGKVESL 802
           S+LK + + +G ++ L
Sbjct: 844 SELKKLPDDMGSLQCL 859



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 92/147 (62%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ +G T + ++  +I  L  L+ L L GCKNL+    +I  L+ L  L LSG S
Sbjct: 644 PKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIH-LESLQILTLSGCS 702

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++ PE+  + D L E+ L+GTAI+GLP SIE L+G  L NL++CK+L+SLP     L+
Sbjct: 703 KLKKXPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLALFNLEECKSLESLPGCXFKLK 762

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  S C +LK + E    +ESL+
Sbjct: 763 SLKTLILSNCLRLKKLPEIQENMESLK 789



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 130/322 (40%), Gaps = 77/322 (23%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  LY DG  +  +PS+       +LL LK C   L  L     S + L+ +ELS    L
Sbjct: 578 LRSLYWDGYPLKSLPSNFH---PEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHL 634

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            K P    +                        P L  + L  C +LV++  SI  LK L
Sbjct: 635 IKXPDFSGA------------------------PKLRRIILEGCTSLVKVHPSIGALKKL 670

Query: 126 KTLN-----------------------LSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
             LN                       LSGC KL+  P+  G +++L EL + GTAI+  
Sbjct: 671 IFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLKKXPEVQGAMDNLSELSLKGTAIKGL 730

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
             SI  +  L       C    +       LP        C   L         SL  L 
Sbjct: 731 PLSIEYLNGLALFNLEECKSLES-------LP-------GCXFKLK--------SLKTLI 768

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           LS+C L    +P   +N+ SLKEL+L+      LP+SI  L  L  L+L++CKRL SLP+
Sbjct: 769 LSNC-LRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPE 827

Query: 283 IP---PNLQFVRANGCSSLVTL 301
                 +LQ +  +GCS L  L
Sbjct: 828 SICKLTSLQTLTLSGCSELKKL 849



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NC RL    E  +    + ++  D T +REL  +IE L GLV L L  CK L  LP +I 
Sbjct: 771 NCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESIC 830

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            L  L TL LSG S+ ++ P+   S   LL++   G+ I+ +P+SI LL+   + +L  C
Sbjct: 831 KLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGC 890

Query: 763 K 763
           K
Sbjct: 891 K 891



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 68/143 (47%), Gaps = 18/143 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS------LPVTISSLKCL 54
           M S++ L  L  +G+ I EVPSSI LLT L++L+L GCK   S      L +  S    L
Sbjct: 853 MGSLQCLLKLKANGSGIQEVPSSITLLTRLQVLSLAGCKGGGSKSRNLALSLRASPTDGL 912

Query: 55  RTLELSGCSKLKK------------FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           R   L+    LKK             P  ++S+  L  L L   +   VP+S+  LP L 
Sbjct: 913 RLSSLTVLHSLKKLNLSDRNLLEGALPSDLSSLSWLECLDLSRNNFITVPTSLSRLPHLR 972

Query: 103 LLYLNECKNLVRLPSSINGLKSL 125
            L +  CKNL  LP   + +K L
Sbjct: 973 RLIVEHCKNLQSLPELPSSIKEL 995



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query: 48   ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
            I  L  L+TL LSGC++LKK P  + S++ L KL  +G+   E  +SI LL  L+
Sbjct: 1256 ICKLTALQTLTLSGCTELKKLPDEMESLQCLVKLKANGSGRQEASTSITLLTKLQ 1310


>gi|224126507|ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1741

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 244/396 (61%), Gaps = 27/396 (6%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G  S++EV  S      L+L+ L  C +L  LP  +  ++ L    LS CSK
Sbjct: 1130 NLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNLE-MESLEVCTLSSCSK 1188

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L KFP IV ++  L +L LDGT+IA++ SS   L GL LL +N CKNL  +PSSI GLKS
Sbjct: 1189 LDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKS 1248

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            LK L++S C +L+N+P+ LG+VESLEE D SGT+IR+P +S FL+KNL+ L F GC    
Sbjct: 1249 LKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCK--- 1305

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                    +  NL  +       +LPSL+G+CSL +LDL  C LGE A+P DI  L SL+
Sbjct: 1306 -------RIAVNLTDQ-------ILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLR 1351

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
             L L+RNNF++LP SI+ L  LE+L L+DC  L+SLP++P  +Q V+ +GC  L  +   
Sbjct: 1352 SLNLSRNNFISLPKSINQLSRLEKLALKDCVMLESLPEVPLKVQKVKLDGCLKLKEIPDP 1411

Query: 305  LKLC---RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPK 361
            +KLC   RS++  +NC +      +N + ++ML +YL+    S P     I  PG++IP 
Sbjct: 1412 IKLCSLKRSEFKCLNCWELYMHNGQNNMGLNMLEKYLQ---GSSPRPGFGIAVPGNEIPG 1468

Query: 362  WFMYQNEGSSITVTRPS-YLY-NVNKVVGFAICCVF 395
            WF +Q++ SSI V  PS YL  + N  +GFA C  F
Sbjct: 1469 WFTHQSKESSIRVQMPSNYLDGDDNGWMGFAACAAF 1504



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 77/118 (65%), Gaps = 1/118 (0%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
            + L  C +L  LP  +  ++ L    LS  SK  +FP+I  + + L E+ L+GTAI  L 
Sbjct: 1158 VNLVNCYSLRILPSNLE-MESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLS 1216

Query: 746  ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +S   L+G +L ++ +CKNL+S+PS+I GL+SL+ +  S CS+LKN+ E LG+VESLE
Sbjct: 1217 SSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLE 1274



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 18/155 (11%)

Query: 646  NCSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
            +CS+L    D+FPDIV       ++  DGT I +LS +   L GLV L++N CKNLE +P
Sbjct: 1185 SCSKL----DKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIP 1240

Query: 699  RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
             +I  LK L  L++S  S+ +  PE     + L E    GT+IR  P S  LL    + +
Sbjct: 1241 SSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLS 1300

Query: 759  LKDCKNL------KSLPSTINGLRSLRMMYPSGCS 787
             K CK +      + LPS ++GL SL  +    C+
Sbjct: 1301 FKGCKRIAVNLTDQILPS-LSGLCSLEELDLCACN 1334



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS------LPVTISSLKCL 54
            +  ++ L +    GTSI + P+S  LL  L++L+ KGCK ++       LP ++S L  L
Sbjct: 1267 LGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRIAVNLTDQILP-SLSGLCSL 1325

Query: 55   RTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
              L+L  C+  +   P+ +  +  L  L L   +   +P SI  L  LE L L +C  L 
Sbjct: 1326 EELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFISLPKSINQLSRLEKLALKDCVMLE 1385

Query: 114  RLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
             LP     ++ +K   L GC KL+ +PD +
Sbjct: 1386 SLPEVPLKVQKVK---LDGCLKLKEIPDPI 1412


>gi|224108373|ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1279

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 196/491 (39%), Positives = 268/491 (54%), Gaps = 56/491 (11%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L    L
Sbjct: 655  LTGIPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNLE-MESLEVCTL 713

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             GCSKL+KFP I  +M  L  L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 714  DGCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSI 773

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSLK L+LSGC +L+ +P+ LGKVESLEE DVSGT+IR+  +S+FL+K L+ L   G
Sbjct: 774  GCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASVFLLKKLKVLSLDG 833

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C                          ++LPSL+G+CSL  L L  C L E A+P DI  
Sbjct: 834  CKR-----------------------IVVLPSLSGLCSLEVLGLRSCNLREGALPEDIGW 870

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SL+ L L++NNFV+LP SI+ L  LE L LEDC  L+SLP++P  +Q V  NGC SL 
Sbjct: 871  LSSLRSLDLSQNNFVSLPKSINRLSELEMLVLEDCTMLESLPEVPSKVQTVYLNGCISLK 930

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
            T+   +KL  SK +   C++  +L   NG   + + ML  Y  LQ +S+P  +  I  PG
Sbjct: 931  TIPDPIKLSSSKRSEFICLNCWELYNHNGQESMGLFMLERY--LQGLSNPRTRFGIAVPG 988

Query: 357  SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
            ++IP WF +Q++GSSI V  PS+       +GF  C  F     S   +           
Sbjct: 989  NEIPGWFNHQSKGSSIRVEVPSW------SMGFVACVAFSSNGQSPSLF----------- 1031

Query: 417  CSMDGSGEGHY---IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSI 468
            C    +G  +Y   +        V+SDH+WL +L     +    WQ  S + I LSF S 
Sbjct: 1032 CHFKANGRENYPSPMCISCNSIQVLSDHIWLFYLSFDYLKELQEWQHGSFSNIELSFHS- 1090

Query: 469  SDPTWKVKRCG 479
            S    KVK CG
Sbjct: 1091 SRTGVKVKNCG 1101



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++  ++ +G T + E+  ++     L  + L  CK++  LP  +  ++ L    L G S
Sbjct: 659 PNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNLE-MESLEVCTLDGCS 717

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FP+I  + + L+ + L+ T I  L +SI  L G  L ++ +CKNLKS+PS+I  L+
Sbjct: 718 KLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCLK 777

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  SGCS+LK + E LGKVESLE
Sbjct: 778 SLKKLDLSGCSELKYIPENLGKVESLE 804



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 12/148 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDI   ++       D T I +LS +I  L GL  L++N CKNL+ +P 
Sbjct: 716 CSKL----EKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPS 771

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E  + GT+IR LPAS+ LL    + +L
Sbjct: 772 SIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASVFLLKKLKVLSL 831

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             CK +  LPS ++GL SL ++    C+
Sbjct: 832 DGCKRIVVLPS-LSGLCSLEVLGLRSCN 858



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 34/195 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           +K G++ +RR+SP+EPG  SRLW     + D+   L D T   +    +E +F    L +
Sbjct: 506 QKMGKEIIRRESPEEPGRRSRLW----TYKDVCLALMDNTGKEK----VEAIF----LDM 553

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-------------------- 728
            G K      +  S +  L  L +  +  F E PE  S+                     
Sbjct: 554 PGIKEARWNMKAFSKMSRLRLLKIDNVQLF-EGPEDLSNNLRFLEWHSYPSKSLPAGLQV 612

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D+L+E+H+  + +  L    +      + NL +  NL   P  + G+ +L+ +   GC+ 
Sbjct: 613 DELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPD-LTGIPNLKSLILEGCTS 671

Query: 789 LKNVTETLGKVESLE 803
           L  V  +L   + L+
Sbjct: 672 LSEVHPSLAHHKKLQ 686


>gi|224116202|ref|XP_002331986.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832110|gb|EEE70587.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1098

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 199/493 (40%), Positives = 270/493 (54%), Gaps = 61/493 (12%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+ L   L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 486 LTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIRILPNNLE-MESLKVCTL 544

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP I+ +M  L  L LD TSI ++PSSI  L GL LL +N CKNL  +PSSI
Sbjct: 545 DGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSI 604

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+ +P+ LGKVESLEE DVSGT IR+  +SIFL+KNL  L   G
Sbjct: 605 GCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDVSGTLIRQLPASIFLLKNLEVLSMDG 664

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C                          +MLPSL+ +CSL  L L  C L E A+P DI +
Sbjct: 665 CKR-----------------------IVMLPSLSSLCSLEVLGLRACNLREGALPEDIGH 701

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L L++N FV+LP +I+ L  LE L LEDC  L SLP++P  +Q V  NGC SL 
Sbjct: 702 LSSLRSLDLSQNKFVSLPKAINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLK 761

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
            +   +KL  SK +   C++  +L + NG   +  +ML  Y  LQ +S+P     I  PG
Sbjct: 762 KIPDPIKLSSSKRSEFLCLNCWELYKHNGRESMGSTMLERY--LQGLSNPRPGFGIAVPG 819

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           ++IP WF ++++GSSI+V  PS        +GF  C  F     S   +           
Sbjct: 820 NEIPGWFNHRSKGSSISVQVPS------GRMGFFACVAFNANDESPSLF----------- 862

Query: 417 CSMDGSGEGHY-----IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFR 466
           C    +G  +Y     I F    GH+ SDH+WL +L     +    WQ ES + I LSF 
Sbjct: 863 CHFKANGRENYPSPMCINFE---GHLFSDHIWLFYLSFDYLKELQEWQHESFSNIELSFH 919

Query: 467 SISDPTWKVKRCG 479
           S      KV  CG
Sbjct: 920 SYEQGV-KVNNCG 931



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++ L   L  + L  CK++  LP  +  ++ L    L G 
Sbjct: 489 IPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIRILPNNLE-MESLKVCTLDGC 547

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           SK  +FP+I  + + L+ + L+ T+I  LP+SI  L G  L ++  CKNL+S+PS+I  L
Sbjct: 548 SKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCL 607

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +  SGCS+LK + E LGKVESLE
Sbjct: 608 KSLKKLDLSGCSELKCIPENLGKVESLE 635



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 11/126 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDI+  ++       D T I +L  +I  L GL  L++N CKNLE +P 
Sbjct: 547 CSKL----EKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPS 602

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E  + GT IR LPASI LL    + ++
Sbjct: 603 SIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDVSGTLIRQLPASIFLLKNLEVLSM 662

Query: 760 KDCKNL 765
             CK +
Sbjct: 663 DGCKRI 668



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 34/189 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           +K G++ +RR+SP+EPG  SRLW     + D+   L D     +    IE +F    L +
Sbjct: 337 QKMGKEIIRRESPEEPGRRSRLW----TYKDVCLALMDNIGKEK----IEAIF----LDM 384

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-------------------- 728
            G K  +      S +  L  L ++ + +  E PE  S++                    
Sbjct: 385 PGIKEAQWNMEAFSKMSRLRLLKINNV-QLSEGPEDLSNKLRFLEWHSYPSKSLPASLQV 443

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D+L+E+H+  ++I  L    +      + NL +  NL   P+ + G+ +L  +   GC+ 
Sbjct: 444 DELVELHMANSSIEQLWYGCKSAINLKIINLSNSLNLSKTPN-LTGIPNLESLILEGCTS 502

Query: 789 LKNVTETLG 797
           L  V  +L 
Sbjct: 503 LSEVHPSLA 511


>gi|359493267|ref|XP_002271591.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1417

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 206/561 (36%), Positives = 298/561 (53%), Gaps = 72/561 (12%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M+ L +LYL  T+I E+P S   LTGL +L LK CKNL SLP +I  L+ L  L LSG
Sbjct: 854  GNMEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICKLESLEYLFLSG 913

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP+++  ME+L +L LDGTSI  +P SI+ L GL LL L  CKNLV LP  +  
Sbjct: 914  CSKLENFPEMMEDMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCK 973

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL +SGC  L N+P  LG ++ L +L   GTAI +P  SI L++NL  L + G  
Sbjct: 974  LTSLETLIVSGCSLLNNLPRNLGSLQRLVQLHAEGTAITQPPDSIVLLRNLEVLVYPGRK 1033

Query: 182  --EPPASAS----WHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIP 234
               P +  S    W LH        SS  + L LPS   +  S T LDLSDC L E AIP
Sbjct: 1034 ILTPTSLGSLFSFWLLH------RNSSNGIGLHLPSGFPIFRSFTNLDLSDCKLIEGAIP 1087

Query: 235  SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
            +DI +L SLK+L L++NNF+++PA IS L NL++L +  C+ L  +P++PP+++ + A+ 
Sbjct: 1088 NDICSLISLKKLALSKNNFLSIPAGISELTNLKDLLIGQCQSLIEIPELPPSIRDIDAHN 1147

Query: 295  CSSLV-------TLFGALKL---CRSKYTIINCIDSLKLLRK--------------NGLA 330
            C++L+       TL G   L   C   +   +  D   +L++                 +
Sbjct: 1148 CTALLPGSSSVSTLQGLQFLFYNCSKLFEDQSSDDKRNVLQRFPHNDASSSASVSSLTTS 1207

Query: 331  ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
              ++++ LE  A        SIVFPGS+IP+W  +Q+ GSSI +  P+  Y  N ++GF+
Sbjct: 1208 PVVMQKLLENIA-------FSIVFPGSEIPEWIWHQHVGSSIKIELPTDWY--NDLLGFS 1258

Query: 391  ICCVFQ-VPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLP- 448
            +C V + +P+          +   +L+        GH   F GK  +V  +H+WL + P 
Sbjct: 1259 LCSVLEHLPERIICRLNSDVFDYGDLK------DFGH--DFHGKGNNVGPEHVWLGYQPC 1310

Query: 449  --------RHGHNWQFESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTK 496
                       ++W    NLI +SF    R  S  +  VK+CG   IY  ++E      K
Sbjct: 1311 SQLRLFEFNDPNDW----NLIEISFEAAHRFSSSASNVVKKCGVCLIYAEDLEGIHPQNK 1366

Query: 497  QSTRFTSCNLNEVHHDFVGSN 517
               +    N+ E   D  G N
Sbjct: 1367 IQLKSRGYNVVERSSDSAGLN 1387



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/271 (40%), Positives = 148/271 (54%), Gaps = 31/271 (11%)

Query: 3    SMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            S  +L  L LDG +S+ EV +SI  L+ L LL+LK CK LSS P +I +++ L+ L LSG
Sbjct: 784  SAPNLETLILDGCSSLLEVHTSIGKLSKLILLSLKNCKKLSSFP-SIINMEALKILNLSG 842

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CS LKKFP I  +ME L +LYL  T+I E+P S   L GL +L L  CKNL  LP+SI  
Sbjct: 843  CSGLKKFPDIQGNMEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICK 902

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L+SL+ L LSGC KLEN P+ +  +E+L+EL + GT+I     SI  +K L         
Sbjct: 903  LESLEYLFLSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPLSIDRLKGLV-------- 954

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDID 238
                           LL   +C   + LP   G+C LT L+   +S C L    +P ++ 
Sbjct: 955  ---------------LLNLRNCKNLVSLPK--GMCKLTSLETLIVSGCSLLN-NLPRNLG 996

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
            +L  L +L+         P SI  L NLE L
Sbjct: 997  SLQRLVQLHAEGTAITQPPDSIVLLRNLEVL 1027



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 90/154 (58%), Gaps = 7/154 (4%)

Query: 656  EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
            +FPDI       +++    T I EL L+   L GLV L L  CKNL+ LP +I  L+ L 
Sbjct: 848  KFPDIQGNMEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICKLESLE 907

Query: 709  TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
             L LSG SK   FPE+    + L E+ L+GT+I GLP SI+ L G +L NL++CKNL SL
Sbjct: 908  YLFLSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSL 967

Query: 769  PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            P  +  L SL  +  SGCS L N+   LG ++ L
Sbjct: 968  PKGMCKLTSLETLIVSGCSLLNNLPRNLGSLQRL 1001



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 24/204 (11%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M  M++L +L LDGTSI  +P SI+ L GL LL L+ CKNL SLP  +  L  L TL +S
Sbjct: 924  MEDMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCKLTSLETLIVS 983

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE------------------ 102
            GCS L   P+ + S++ L +L+ +GT+I + P SI LL  LE                  
Sbjct: 984  GCSLLNNLPRNLGSLQRLVQLHAEGTAITQPPDSIVLLRNLEVLVYPGRKILTPTSLGSL 1043

Query: 103  ----LLYLNECKNL-VRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSG 156
                LL+ N    + + LPS     +S   L+LS C  +E  +P+ +  + SL++L +S 
Sbjct: 1044 FSFWLLHRNSSNGIGLHLPSGFPIFRSFTNLDLSDCKLIEGAIPNDICSLISLKKLALSK 1103

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGC 180
                   + I  + NL+ L    C
Sbjct: 1104 NNFLSIPAGISELTNLKDLLIGQC 1127



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++  ++ DG + + E+  +I  L  L+ L+L  CK L   P  I+ ++ L  LNLSG S
Sbjct: 786 PNLETLILDGCSSLLEVHTSIGKLSKLILLSLKNCKKLSSFPSIIN-MEALKILNLSGCS 844

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             ++FP+I  + + LLE++L  TAI  LP S   L+G ++ +LK CKNLKSLP++I  L 
Sbjct: 845 GLKKFPDIQGNMEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASICKLE 904

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  ++ SGCSKL+N  E +  +E+L+
Sbjct: 905 SLEYLFLSGCSKLENFPEMMEDMENLK 931



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 171/385 (44%), Gaps = 51/385 (13%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            +L  LY  G  +  +PSS +    +EL       NL  L      L+ L T+ LS    L
Sbjct: 718  ELRYLYWQGYPLESLPSSFDAEDLVELDMRYS--NLKQLWENDMLLEKLNTIRLSCSQHL 775

Query: 66   KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
             + P I  S  +L  L LDG +S+ EV +SI  L  L LL L  CK L   PS IN +++
Sbjct: 776  IEIPDISISAPNLETLILDGCSSLLEVHTSIGKLSKLILLSLKNCKKLSSFPSIIN-MEA 834

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            LK LNLSGC  L+  PD  G +E L EL ++ TAI     S   +  L  L    C    
Sbjct: 835  LKILNLSGCSGLKKFPDIQGNMEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCK--- 891

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                       NL    S P      S+  + SL  L LS C   E   P  ++++ +LK
Sbjct: 892  -----------NL---KSLPA-----SICKLESLEYLFLSGCSKLE-NFPEMMEDMENLK 931

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSLVTL 301
            EL L+  +   LP SI  L  L  L L +CK L SLP+      +L+ +  +GCS L  L
Sbjct: 932  ELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCKLTSLETLIVSGCSLLNNL 991

Query: 302  ---FGAL----KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK-LSIV 353
                G+L    +L      I    DS+ LLR              L+ +  PG K L+  
Sbjct: 992  PRNLGSLQRLVQLHAEGTAITQPPDSIVLLRN-------------LEVLVYPGRKILTPT 1038

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPS 378
              GS    W +++N  + I +  PS
Sbjct: 1039 SLGSLFSFWLLHRNSSNGIGLHLPS 1063



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 647  CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
            CS+L    E  ++  ++ ++L DGT I  L L+I+ L GLV L L  CKNL  LP+ +  
Sbjct: 914  CSKLENFPEMMEDMENLKELLLDGTSIEGLPLSIDRLKGLVLLNLRNCKNLVSLPKGMCK 973

Query: 704  LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
            L  L TL +SG S     P    S  +L+++H EGTAI   P SI LL
Sbjct: 974  LTSLETLIVSGCSLLNNLPRNLGSLQRLVQLHAEGTAITQPPDSIVLL 1021


>gi|451798990|gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 163/409 (39%), Positives = 245/409 (59%), Gaps = 21/409 (5%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M+ L +L L+GT+I  +P SIE LTGL LL LK CK+L SLP +I  LK L+TL LS 
Sbjct: 745  GNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSN 804

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            C++LKK P+I  +ME L +L+LDG+ I E+PSSI  L GL  L L  CK L  LP S   
Sbjct: 805  CTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCE 864

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL L GC +L+++PD LG ++ L EL+  G+ ++    SI L+ NL+ L  +GC 
Sbjct: 865  LTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGC- 923

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
            +   S S ++   F+    SS    L LPS +G+ SL  L L  C L E A+PSD+ ++ 
Sbjct: 924  KGGESKSRNMIFSFH----SSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGSIP 979

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            SL+ L L+RN+F+T+PAS+SGL  L  L LE CK LQSLP++P +++ + A+ C+SL T 
Sbjct: 980  SLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETF 1039

Query: 302  ------FGALKLCRSKYTIINCI--------DSLKLLRKNGLAISMLREYL-ELQAVSDP 346
                  + + K    ++   NC         D +  + +    +S + ++L   + +  P
Sbjct: 1040 TCSSSAYTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPDRGIPTP 1099

Query: 347  GHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
             ++ + + PG++IP+WF +Q+ G S+ +  P + YN  K++G A C   
Sbjct: 1100 HNEYNALVPGNRIPEWFRHQSVGCSVNIELPQHWYNT-KLMGLAFCAAL 1147



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 89/137 (64%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +GT I+ L L+IE L GL  L L  CK+LE LPR+I  LK L TL LS  ++ ++ PEI 
Sbjct: 756 EGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQ 815

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            + + L+E+ L+G+ I  LP+SI  L+G +  NLK+CK L SLP +   L SLR +   G
Sbjct: 816 ENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCG 875

Query: 786 CSKLKNVTETLGKVESL 802
           CS+LK++ + LG ++ L
Sbjct: 876 CSELKDLPDNLGSLQCL 892



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 93/146 (63%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G T + E+  +I  L  L+ L L GCK L+    +I  ++ L  L LSG S
Sbjct: 677 PNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCS 735

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  + + L  + LEGTAI+GLP SIE L+G  L NLK+CK+L+SLP +I  L+
Sbjct: 736 KLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLK 795

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL+ +  S C++LK + E    +ESL
Sbjct: 796 SLKTLILSNCTRLKKLPEIQENMESL 821



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 23/180 (12%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NC+RL    E  +    ++++  DG+ I EL  +I  L GLV L L  CK L  LP++  
Sbjct: 804 NCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFC 863

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            L  L TL L G S+ ++ P+   S   L E++ +G+ ++ +P SI LL+   + +L  C
Sbjct: 864 ELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGC 923

Query: 763 KNLKS------------------LPSTINGLRSLRMMYPSGCSKLKNVTET-LGKVESLE 803
           K  +S                  LPS  +GL SLR++    C+  +    + LG + SLE
Sbjct: 924 KGGESKSRNMIFSFHSSPTEELRLPS-FSGLYSLRVLILQRCNLSEGALPSDLGSIPSLE 982



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 12/184 (6%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVT-ISSLKCLRTLEL 59
            + S++ L++L  DG+ + EVP SI LLT L++L+L GCK   S     I S     T EL
Sbjct: 886  LGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGCKGGESKSRNMIFSFHSSPTEEL 945

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
                +L  F    + +  L  L L   +++E  +PS +  +P LE L L+   + + +P+
Sbjct: 946  ----RLPSF----SGLYSLRVLILQRCNLSEGALPSDLGSIPSLERLDLSR-NSFITIPA 996

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            S++GL  L++L L  C  L+++P+    VESL     +       +SS +  K    L F
Sbjct: 997  SLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLETFTCSSSAYTSKKFGDLRF 1056

Query: 178  SGCN 181
            +  N
Sbjct: 1057 NFTN 1060


>gi|359486073|ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 190/496 (38%), Positives = 279/496 (56%), Gaps = 30/496 (6%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            M + S+L L GT+I  +P SIE L GL LL L+ CK+L SLP  I  LK L+TL LS CS
Sbjct: 746  MDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEECKSLESLPSCIFKLKSLKTLILSNCS 805

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            +LKK P+I  +ME L +L+LD T + E+PSSIE L GL LL L  CK L  LP S   L 
Sbjct: 806  RLKKLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESFCKLT 865

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            SL+TL LSGC +L+ +PD +G ++ L +L  +G+ I+   +SI L+  L+ L  +GC + 
Sbjct: 866  SLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPTSITLLTKLQVLSLAGC-KG 924

Query: 184  PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
              S S +L L      ++S    L L SLT + SL KL+LSDC L E A+PSD+ +L  L
Sbjct: 925  GGSKSKNLALSL----RASPTDGLRLSSLTVLHSLKKLNLSDCNLLEGALPSDLSSLSWL 980

Query: 244  KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
            + L L+RN+F+T+P S+S L  LE L LE CK L+SLP++P +++ + AN C+SL T+  
Sbjct: 981  ECLDLSRNSFITVP-SLSRLPRLERLILEHCKSLRSLPELPSSVEELLANDCTSLETISN 1039

Query: 304  -----ALKLCRSKYT-IINCIDSLKLLRKNGL-----AISMLREYLELQAVSDPGHKLSI 352
                 A +     Y+   NC   ++  + + +      I ++       A SD    LSI
Sbjct: 1040 PSSAYAWRNSGHLYSEFCNCFRLVENEQSDNVEAILRGIRLVASIPNSVAPSDIQRDLSI 1099

Query: 353  VF----PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
            V+    PGS IP+WF +Q+E  S+TV  P +  N  +++G A+C VF       G +   
Sbjct: 1100 VYDAVVPGSSIPEWFTHQSERCSVTVELPPHWCNT-RLMGLAVCVVFHA-NIGMGKFGRS 1157

Query: 409  SYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSI 468
            +Y       SM+ SG G  ++         +DH+W  + P  G  +    + +++SF   
Sbjct: 1158 AY------FSMNESG-GFSLHNTVSMHFSKADHIWFGYRPLFGDVFSSSIDHLKVSFAGS 1210

Query: 469  SDPTWKVKRCGFHPIY 484
            +     VK+CG   ++
Sbjct: 1211 NRAGEVVKKCGVRLVF 1226



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 11/163 (6%)

Query: 647 CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP++   + +       GT I+ L L+IE L GL  L L  CK+LE LP 
Sbjct: 733 CSKL----KKFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEECKSLESLPS 788

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I  LK L TL LS  S+ ++ PEI  + + L E+ L+ T +R LP+SIE L+G +L  L
Sbjct: 789 CIFKLKSLKTLILSNCSRLKKLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLVLLKL 848

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           K+CK L SLP +   L SL+ +  SGCS+LK + + +G ++ L
Sbjct: 849 KNCKRLASLPESFCKLTSLQTLTLSGCSELKKLPDDMGSLQCL 891



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 94/147 (63%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ +G T + ++  +I  L  L+ L L GCKNL+    +I  L+ L  L LSG S
Sbjct: 676 PKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSIH-LESLQILTLSGCS 734

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+    D   E+ L+GTAI+GLP SIE L+G  L NL++CK+L+SLPS I  L+
Sbjct: 735 KLKKFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLALLNLEECKSLESLPSCIFKLK 794

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  S CS+LK + E    +ESL+
Sbjct: 795 SLKTLILSNCSRLKKLPEIGENMESLK 821



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 131/322 (40%), Gaps = 77/322 (23%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  LY DG  +  +PS+       +LL LK C   L  L     S + L+ +ELS    L
Sbjct: 610 LRSLYWDGYPLKSLPSNFH---PEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHL 666

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            K P    +                        P L  + L  C +LV++  SI  LK L
Sbjct: 667 IKTPDFSGA------------------------PKLRRIILEGCTSLVKVHPSIGALKKL 702

Query: 126 KTLN-----------------------LSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
             LN                       LSGC KL+  P+  G +++  EL + GTAI+  
Sbjct: 703 IFLNLEGCKNLKSFLSSIHLESLQILTLSGCSKLKKFPEVQGPMDNFSELSLKGTAIKGL 762

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
             SI  +  L  L    C    +       LP       SC   L         SL  L 
Sbjct: 763 PLSIEYLNGLALLNLEECKSLES-------LP-------SCIFKLK--------SLKTLI 800

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           LS+C   +  +P   +N+ SLKEL+L+      LP+SI  L  L  L+L++CKRL SLP+
Sbjct: 801 LSNCSRLK-KLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPE 859

Query: 283 ---IPPNLQFVRANGCSSLVTL 301
                 +LQ +  +GCS L  L
Sbjct: 860 SFCKLTSLQTLTLSGCSELKKL 881



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NCSRL    E  +    + ++  D T +REL  +IE L GLV L L  CK L  LP +  
Sbjct: 803 NCSRLKKLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKRLASLPESFC 862

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            L  L TL LSG S+ ++ P+   S   LL++   G+ I+ +P SI LL+   + +L  C
Sbjct: 863 KLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEVPTSITLLTKLQVLSLAGC 922

Query: 763 K 763
           K
Sbjct: 923 K 923



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 22/159 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK-----------NLSSLPV--- 46
            M S++ L  L  +G+ I EVP+SI LLT L++L+L GCK           +L + P    
Sbjct: 885  MGSLQCLLKLKANGSGIQEVPTSITLLTKLQVLSLAGCKGGGSKSKNLALSLRASPTDGL 944

Query: 47   ---TISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
               +++ L  L+ L LS C+ L+   P  ++S+  L  L L   S   VP S+  LP LE
Sbjct: 945  RLSSLTVLHSLKKLNLSDCNLLEGALPSDLSSLSWLECLDLSRNSFITVP-SLSRLPRLE 1003

Query: 103  LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
             L L  CK+L  LP   +   S++ L  + C  LE + +
Sbjct: 1004 RLILEHCKSLRSLPELPS---SVEELLANDCTSLETISN 1039


>gi|147822714|emb|CAN68293.1| hypothetical protein VITISV_015601 [Vitis vinifera]
          Length = 1254

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/396 (42%), Positives = 230/396 (58%), Gaps = 6/396 (1%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            M+ LS+L L+GT+I E+PSS+  L  L  L +K CKNL  LP  I SLK L TL  SGCS
Sbjct: 726  MEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFSGCS 785

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
             L+ FP+I+  ME L KL LDGTSI E+P SI  L GL+LL L +CKNL  LP+SI  L+
Sbjct: 786  GLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLR 845

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            SL+TL +SGC  L  +P+ LG ++ L  L   GTAI +P  S+  ++NL+ L F GC + 
Sbjct: 846  SLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGC-KG 904

Query: 184  PASASWHLHLPFNLLGK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
              S SW   L F LL + +S    L LP L+G+ SL  LDLS C L + +I  ++  L  
Sbjct: 905  STSNSWIXSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRF 964

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            L+EL L+RNN V +P  +  L NL  L +  CK LQ + ++PP+++ + A  C SL  L 
Sbjct: 965  LEELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEFLS 1024

Query: 303  GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD---PGHKLSIVFPGSQI 359
                      +  +C+  L     N  A++       L+ +     P  + SIV PGS I
Sbjct: 1025 IPSPQSPQYLSSSSCLHPLSFKLSNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTI 1084

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
            P+WF + + GSS T+  P   +N +  +GFA+C VF
Sbjct: 1085 PEWFQHPSIGSSETIELPPNWHNKD-FLGFALCSVF 1119



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/270 (38%), Positives = 142/270 (52%), Gaps = 31/270 (11%)

Query: 10  LYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L LDG TS+ EV  S+  L  L +L +K CK L   P +I+ L+ L+ L LSGCSKL KF
Sbjct: 661 LILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFP-SITGLESLKVLNLSGCSKLDKF 719

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           P+I   ME LS+L L+GT+I E+PSS+  LP L  L +  CKNL  LPS+I  LKSL+TL
Sbjct: 720 PEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETL 779

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
             SGC  LE  P+ +  +ESL++L + GT+I+    SI  +K L+ L    C        
Sbjct: 780 VFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCK------- 832

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLHSLKE 245
                  NL    S P          +CSL  L+   +S C      +P ++ +L  L  
Sbjct: 833 -------NL---RSLP--------NSICSLRSLETLIVSGCS-NLNKLPEELGSLQYLMI 873

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCK 275
           L  +       P S+  L NL+EL    CK
Sbjct: 874 LQADGTAITQPPFSLVHLRNLKELSFRGCK 903



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 112/203 (55%), Gaps = 23/203 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L LDGTSI E+P SI  L GL+LL+L+ CKNL SLP +I SL+ L TL +S
Sbjct: 794 MEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVS 853

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN--------- 111
           GCS L K P+ + S++ L  L  DGT+I + P S+  L  L+ L    CK          
Sbjct: 854 GCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKGSTSNSWIXS 913

Query: 112 ----LVRLPSS---------INGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGT 157
               L+R  +S         ++GL SLK L+LSGC   + ++ D LG++  LEEL++S  
Sbjct: 914 LVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRN 973

Query: 158 AIRRPTSSIFLMKNLRSLYFSGC 180
            +      +  + NLR L  + C
Sbjct: 974 NLVMVPEGVHRLSNLRVLSVNQC 996



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 98/165 (59%), Gaps = 11/165 (6%)

Query: 647 CSRLWEEADEFPDI---VQVLSD----GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    D+FP+I   ++ LS+    GT I EL  ++  L  LV L +  CKNL+ LP 
Sbjct: 713 CSKL----DKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPS 768

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I +LK L TL  SG S    FPEI    + L ++ L+GT+I+ LP SI  L G  L +L
Sbjct: 769 NICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSL 828

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           + CKNL+SLP++I  LRSL  +  SGCS L  + E LG ++ L +
Sbjct: 829 RKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMI 873



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ DG T + E+  ++  L  L  L +  CK L   P +I+ L+ L  LNLSG S
Sbjct: 656 PHVKRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFP-SITGLESLKVLNLSGCS 714

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FPEI    + L E++LEGTAI  LP+S+  L   +  ++K+CKNLK LPS I  L+
Sbjct: 715 KLDKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLK 774

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  +  SGCS L+   E +  +ESL+
Sbjct: 775 SLETLVFSGCSGLEMFPEIMEVMESLQ 801



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 32/178 (17%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++V+        DGT I+EL  +I  L GL  L+L  CKNL  LP +I +L+ L T
Sbjct: 790 FPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLET 849

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS-- 767
           L +SG S   + PE   S   L+ +  +GTAI   P S+  L      + + CK   S  
Sbjct: 850 LIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKGSTSNS 909

Query: 768 ---------------------LPSTINGLRSLRMMYPSGCSKLK-NVTETLGKVESLE 803
                                LP  ++GL SL+ +  SGC+    ++ + LG++  LE
Sbjct: 910 WIXSLVFRLLRRENSDGTGLQLP-YLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLE 966



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 34/200 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLF------G 682
           ++ G   VR + P EPG  SRLW+      DI  VL+  T  +    AIE +F       
Sbjct: 495 QQMGWDIVREKYPDEPGKWSRLWDPE----DIYHVLTTNTGTQ----AIEGIFLDMSASK 546

Query: 683 LVQLTLNGCKNLE--RLPRTISALKYLS-TLNLSGLSKF---------------REFPEI 724
            + LT +  K ++  RL R    LK +S T++L    KF                  P  
Sbjct: 547 EIHLTTDAFKKMKKLRLLRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLESLPS- 605

Query: 725 TSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
               ++L+E+ L+ ++I+ L    + L    + NL + ++L   P+ ++G   ++ +   
Sbjct: 606 NFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPN-LSGAPHVKRLILD 664

Query: 785 GCSKLKNVTETLGKVESLEV 804
           GC+ L  V  ++ K++ L +
Sbjct: 665 GCTSLLEVHPSVAKLKRLTI 684


>gi|359495221|ref|XP_002274238.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1181

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/396 (42%), Positives = 230/396 (58%), Gaps = 6/396 (1%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            M+ LS+L L+GT+I E+PSS+  L  L  L +K CKNL  LP  I SLK L TL  SGCS
Sbjct: 713  MEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETLVFSGCS 772

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
             L+ FP+I+  ME L KL LDGTSI E+P SI  L GL+LL L +CKNL  LP+SI  L+
Sbjct: 773  GLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLR 832

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            SL+TL +SGC  L  +P+ LG ++ L  L   GTAI +P  S+  ++NL+ L F GC + 
Sbjct: 833  SLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGC-KG 891

Query: 184  PASASWHLHLPFNLLGK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
              S SW   L F LL + +S    L LP L+G+ SL  LDLS C L + +I  ++  L  
Sbjct: 892  STSNSWISSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRF 951

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            L+EL L+RNN V +P  +  L NL  L +  CK LQ + ++PP+++ + A  C SL  L 
Sbjct: 952  LEELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAGDCISLEFLS 1011

Query: 303  GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD---PGHKLSIVFPGSQI 359
                      +  +C+  L     N  A++       L+ +     P  + SIV PGS I
Sbjct: 1012 IPSPQSPQYLSSSSCLHPLSFKLSNCFALAQDNVATILEKLHQNFLPEIEYSIVLPGSTI 1071

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
            P+WF + + GSS T+  P   +N +  +GFA+C VF
Sbjct: 1072 PEWFQHPSIGSSETIELPPNWHNKD-FLGFALCSVF 1106



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/270 (38%), Positives = 142/270 (52%), Gaps = 31/270 (11%)

Query: 10  LYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L LDG TS+ EV  S+  L  L +L +K CK L   P +I+ L+ L+ L LSGCSKL KF
Sbjct: 648 LILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFP-SITGLESLKVLNLSGCSKLDKF 706

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           P+I   ME LS+L L+GT+I E+PSS+  LP L  L +  CKNL  LPS+I  LKSL+TL
Sbjct: 707 PEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLKSLETL 766

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
             SGC  LE  P+ +  +ESL++L + GT+I+    SI  +K L+ L    C        
Sbjct: 767 VFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCK------- 819

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLHSLKE 245
                  NL    S P          +CSL  L+   +S C      +P ++ +L  L  
Sbjct: 820 -------NL---RSLP--------NSICSLRSLETLIVSGCS-NLNKLPEELGSLQYLMI 860

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCK 275
           L  +       P S+  L NL+EL    CK
Sbjct: 861 LQADGTAITQPPFSLVHLRNLKELSFRGCK 890



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 112/203 (55%), Gaps = 23/203 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L LDGTSI E+P SI  L GL+LL+L+ CKNL SLP +I SL+ L TL +S
Sbjct: 781 MEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLETLIVS 840

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK---------- 110
           GCS L K P+ + S++ L  L  DGT+I + P S+  L  L+ L    CK          
Sbjct: 841 GCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKGSTSNSWISS 900

Query: 111 ---NLVRLPSS---------INGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGT 157
               L+R  +S         ++GL SLK L+LSGC   + ++ D LG++  LEEL++S  
Sbjct: 901 LVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLEELNLSRN 960

Query: 158 AIRRPTSSIFLMKNLRSLYFSGC 180
            +      +  + NLR L  + C
Sbjct: 961 NLVMVPEGVHRLSNLRVLSVNQC 983



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 98/165 (59%), Gaps = 11/165 (6%)

Query: 647 CSRLWEEADEFPDI---VQVLSD----GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    D+FP+I   ++ LS+    GT I EL  ++  L  LV L +  CKNL+ LP 
Sbjct: 700 CSKL----DKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPS 755

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I +LK L TL  SG S    FPEI    + L ++ L+GT+I+ LP SI  L G  L +L
Sbjct: 756 NICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSL 815

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           + CKNL+SLP++I  LRSL  +  SGCS L  + E LG ++ L +
Sbjct: 816 RKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMI 860



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ DG T + E+  ++  L  L  L +  CK L   P +I+ L+ L  LNLSG S
Sbjct: 643 PHVKRLILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFP-SITGLESLKVLNLSGCS 701

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FPEI    + L E++LEGTAI  LP+S+  L   +  ++K+CKNLK LPS I  L+
Sbjct: 702 KLDKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNICSLK 761

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  +  SGCS L+   E +  +ESL+
Sbjct: 762 SLETLVFSGCSGLEMFPEIMEVMESLQ 788



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 32/178 (17%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++V+        DGT I+EL  +I  L GL  L+L  CKNL  LP +I +L+ L T
Sbjct: 777 FPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQLLSLRKCKNLRSLPNSICSLRSLET 836

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS-- 767
           L +SG S   + PE   S   L+ +  +GTAI   P S+  L      + + CK   S  
Sbjct: 837 LIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLKELSFRGCKGSTSNS 896

Query: 768 ---------------------LPSTINGLRSLRMMYPSGCSKLK-NVTETLGKVESLE 803
                                LP  ++GL SL+ +  SGC+    ++ + LG++  LE
Sbjct: 897 WISSLVFRLLRRENSDGTGLQLP-YLSGLYSLKYLDLSGCNLTDGSINDNLGRLRFLE 953



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 34/200 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLF------G 682
           ++ G   VR + P EPG  SRLW+      DI  VL+  T  +    AIE +F       
Sbjct: 482 QQMGWDIVREKYPDEPGKWSRLWDPE----DIYHVLTTNTGTQ----AIEGIFLDMSASK 533

Query: 683 LVQLTLNGCKNLE--RLPRTISALKYLS-TLNLSGLSKF---------------REFPEI 724
            + LT +  K ++  RL R    LK +S T++L    KF                  P  
Sbjct: 534 EIHLTTDAFKKMKKLRLLRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLESLPS- 592

Query: 725 TSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
               ++L+E+ L+ ++I+ L    + L    + NL + ++L   P+ ++G   ++ +   
Sbjct: 593 NFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPN-LSGAPHVKRLILD 651

Query: 785 GCSKLKNVTETLGKVESLEV 804
           GC+ L  V  ++ K++ L +
Sbjct: 652 GCTSLLEVHPSVAKLKRLTI 671


>gi|225448053|ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 187/507 (36%), Positives = 279/507 (55%), Gaps = 38/507 (7%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            +M+ L +L+LD T + E+PSSIE L  L LL +K CK L+SLP +I  LK L+TL +S C
Sbjct: 814  NMESLKELFLDDTGLRELPSSIEHLNELVLLQMKNCKKLASLPESIFKLKSLKTLTISNC 873

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             +LKK P+I  +ME L +L+LD T + E+PSSIE L GL LL L  CK L  LP SI  L
Sbjct: 874  LRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICKL 933

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
             SL+TL LSGC +L+ +PD +G ++ L +L+ +G+ I+   +SI L+ NL+ L  +GC +
Sbjct: 934  TSLQTLTLSGCSELKKLPDDMGSLQCLVKLESNGSGIQEVPTSITLLTNLQVLSLTGC-K 992

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
               S S +L L      +SS      L SLT + SL +L+LSDC L E A+PSD+ +L  
Sbjct: 993  GGESKSRNLALSL----RSSPTEGFRLSSLTALYSLKELNLSDCNLLEGALPSDLSSLSW 1048

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL- 301
            L+ L L+ N+F+T+P S+S L  LE L LE CK LQSLP++P ++  + AN C+SL  + 
Sbjct: 1049 LERLDLSINSFITVP-SLSRLPQLERLILEHCKSLQSLPELPSSIIELLANDCTSLENIS 1107

Query: 302  -----FGALKLCRSKYTIINCIDSLKLLRKNGLAISML--REYLELQAVSDPGHKLSI-- 352
                 F   K C   +   NC   ++  + + L   +L  R +  +    DP    S+  
Sbjct: 1108 YLSSGFVLRKFCDFNFEFCNCFRLMENEQSDTLEAILLAIRRFASVTKFMDPMDYSSLRT 1167

Query: 353  ---------VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTG 403
                     V PGS IP+WF  Q+ G S+TV  P + Y   +++G A+C VF  P  S G
Sbjct: 1168 FASRIPYDAVVPGSSIPEWFTDQSVGCSVTVELPPHWY-TTRLIGLAVCAVFH-PNISKG 1225

Query: 404  TYLFHSYPA--HELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLI 461
             +   +Y +    +  S+D +   H+           ++H+W  +    G  +    + +
Sbjct: 1226 KFGRSAYFSMNESVGFSIDNTASMHF---------SKAEHIWFGYRSLFGVVFSRSIDHL 1276

Query: 462  RLSFRSISDPTWKVKRCGFHPIYMHEV 488
             +SF         VK+CG   I+  ++
Sbjct: 1277 EVSFSESIRAGEVVKKCGVRLIFEQDL 1303



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/277 (40%), Positives = 152/277 (54%), Gaps = 6/277 (2%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ +V  SI  L  L  L L+GCKNL S   +I  ++ L+ L L+GCSKLKKFP++  +
Sbjct: 685 TSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSIH-MESLQILNLAGCSKLKKFPEVQGA 743

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M +L +L L GT+I  +P SIE L GL LL L ECK+L  LPS I  LKSLKTL LS C 
Sbjct: 744 MYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSCIFKLKSLKTLILSNCL 803

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           +L+ +P+    +ESL+EL +  T +R   SSI  +  L  L    C +  +       L 
Sbjct: 804 RLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLLQMKNCKKLASLPESIFKLK 863

Query: 195 -FNLLGKSSCPVALMLPSL-TGVCSLTKLDLSDCGLGEAAIPSDIDNLHS-LKELYLNRN 251
               L  S+C     LP +   + SL +L L D GL E  +PS I++L+  +     N  
Sbjct: 864 SLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLRE--LPSSIEHLNGLVLLKLKNCK 921

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
              +LP SI  L +L+ L L  C  L+ LP    +LQ
Sbjct: 922 KLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQ 958



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 11/166 (6%)

Query: 645 GNCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
             CS+L     +FP++   + +       GT I+ L L+IE L GL  L L  CK+LE L
Sbjct: 729 AGCSKL----KKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESL 784

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P  I  LK L TL LS   + ++ PEI  + + L E+ L+ T +R LP+SIE L+  +L 
Sbjct: 785 PSCIFKLKSLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLL 844

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +K+CK L SLP +I  L+SL+ +  S C +LK + E    +ESL+
Sbjct: 845 QMKNCKKLASLPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLK 890



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 94/147 (63%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G T + ++  +I  L  L+ L L GCKNL+    +I  ++ L  LNL+G S
Sbjct: 674 PNLRRIILVGCTSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSIH-MESLQILNLAGCS 732

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  +   L E+ L+GTAI+GLP SIE L+G  L NL +CK+L+SLPS I  L+
Sbjct: 733 KLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKSLESLPSCIFKLK 792

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  S C +LK + E    +ESL+
Sbjct: 793 SLKTLILSNCLRLKKLPEIRENMESLK 819



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 4/166 (2%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NC RL    E  +    + ++  D T +REL  +IE L  LV L +  CK L  LP +I 
Sbjct: 801 NCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELVLLQMKNCKKLASLPESIF 860

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            LK L TL +S   + ++ PEI  + + L E+ L+ T +R LP+SIE L+G +L  LK+C
Sbjct: 861 KLKSLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNGLVLLKLKNC 920

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
           K L SLP +I  L SL+ +  SGCS+LK + + +G ++ L V+L S
Sbjct: 921 KKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCL-VKLES 965



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 145/292 (49%), Gaps = 14/292 (4%)

Query: 6   DLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +L  L+ DG     +PS+   E L  L++        L  L     S + L+ ++LS   
Sbjct: 607 NLKSLHWDGYPSKSLPSTFHPEKLVELKM----SFSRLEQLWEGNKSFQKLKFIKLSHSQ 662

Query: 64  KLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            L K P   +   +L ++ L G TS+ +V  SI  L  L  L L  CKNL    SSI+ +
Sbjct: 663 HLIKTPDF-SGAPNLRRIILVGCTSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSIH-M 720

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           +SL+ LNL+GC KL+  P+  G + +L EL + GTAI+    SI  +  L  L    C  
Sbjct: 721 ESLQILNLAGCSKLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECKS 780

Query: 183 PPASASWHLHLP-FNLLGKSSCPVALMLPSL-TGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
             +  S    L     L  S+C     LP +   + SL +L L D GL E  +PS I++L
Sbjct: 781 LESLPSCIFKLKSLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRE--LPSSIEHL 838

Query: 241 HSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           + L  L + N     +LP SI  L +L+ L + +C RL+ LP+I  N++ ++
Sbjct: 839 NELVLLQMKNCKKLASLPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLK 890



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 22/157 (14%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK-----------NLSSLPV--- 46
            M S++ L  L  +G+ I EVP+SI LLT L++L+L GCK           +L S P    
Sbjct: 954  MGSLQCLVKLESNGSGIQEVPTSITLLTNLQVLSLTGCKGGESKSRNLALSLRSSPTEGF 1013

Query: 47   ---TISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
               ++++L  L+ L LS C+ L+   P  ++S+  L +L L   S   VP S+  LP LE
Sbjct: 1014 RLSSLTALYSLKELNLSDCNLLEGALPSDLSSLSWLERLDLSINSFITVP-SLSRLPQLE 1072

Query: 103  LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
             L L  CK+L  LP   +   S+  L  + C  LEN+
Sbjct: 1073 RLILEHCKSLQSLPELPS---SIIELLANDCTSLENI 1106



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 2/120 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L ++  + LE+L     + + L  + LS      + P+ + + +    I +  T++ 
Sbjct: 630 LVELKMSFSR-LEQLWEGNKSFQKLKFIKLSHSQHLIKTPDFSGAPNLRRIILVGCTSLV 688

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +  SI  L   I  +L+ CKNLKS  S+I+ + SL+++  +GCSKLK   E  G + +L
Sbjct: 689 KVHPSIGALKKLIFLDLEGCKNLKSFSSSIH-MESLQILNLAGCSKLKKFPEVQGAMYNL 747


>gi|359493487|ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 181/500 (36%), Positives = 267/500 (53%), Gaps = 46/500 (9%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L  L L G TS+ EV  SI  L  L  L L+GCK L S   +I  ++ L+ L L
Sbjct: 679  FSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTL 737

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLKKFP++  +ME L  L L+GT+I  +P SIE L GL LL L ECK+L  LP SI
Sbjct: 738  SGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSI 797

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSLKTL L GC +L+ +PD LG ++ L EL+  G+ I+    SI L+ NL+ L  +G
Sbjct: 798  FKLKSLKTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAG 857

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C +   S S ++   F+    SS    L LPS +G+ SL  L L  C L E A+PSD+ +
Sbjct: 858  C-KGGDSKSRNMVFSFH----SSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGS 912

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            + SL+ L L+RN+F+T+PAS+SGL  L  L LE CK LQSLP++P +++ + A+ C+SL 
Sbjct: 913  IPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLE 972

Query: 300  TL------FGALKLCRSKYTIINCI--------DSLKLLRKNGLAISMLREYLELQAVSD 345
            T       + + K    ++   NC         D +  + +    +S + ++L    +  
Sbjct: 973  TFSCSSGAYTSKKFGDLRFNFTNCFRLGENQGSDIVGAILEGIQLMSSIPKFLVPWGIPT 1032

Query: 346  PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY 405
            P ++ + + PGS+IP+WF +Q+ G S+ +  P + YN  K++G A C          G  
Sbjct: 1033 PHNEYNALVPGSRIPEWFRHQSVGCSVNIELPPHWYNT-KLMGLAFCAALNFKGAMDG-- 1089

Query: 406  LFHSYPAHEL----------ECSMDGSGEGHYIYFRG-KFGHVVSDHLWLLFLPRHGHNW 454
                YP  E           +C ++      Y    G KF  + SDH    ++      W
Sbjct: 1090 ----YPGTEPSSFGLVCYLNDCFVETGLHSLYTPLEGSKF--IESDHTLFEYISLARERW 1143

Query: 455  QFESNLIRLSFRSISDPTWK 474
            +     ++LSFR      W+
Sbjct: 1144 R-----MQLSFRHHVAGRWR 1158



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 94/146 (64%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G T + E+  +I  L  L+ L L GCK L+    +I  ++ L  L LSG S
Sbjct: 683 PNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCS 741

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  + + L  + LEGTAI+GLP SIE L+G  L NLK+CK+L+SLP +I  L+
Sbjct: 742 KLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLK 801

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL+ +   GCS+LK + + LG ++ L
Sbjct: 802 SLKTLTLCGCSELKELPDDLGSLQCL 827



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 20/157 (12%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +GT I+ L L+IE L GL  L L  CK+LE LPR+I  LK L TL L G S+ +E P+  
Sbjct: 762 EGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLTLCGCSELKELPDDL 821

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS------------------ 767
            S   L E++ +G+ I+ +P SI LL+     +L  CK   S                  
Sbjct: 822 GSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCKGGDSKSRNMVFSFHSSPTEELR 881

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTET-LGKVESLE 803
           LPS  +GL SLR++    C+  +    + LG + SLE
Sbjct: 882 LPS-FSGLYSLRVLILQRCNLSEGALPSDLGSIPSLE 917


>gi|224120756|ref|XP_002330944.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
 gi|222873138|gb|EEF10269.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
          Length = 813

 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 160/344 (46%), Positives = 214/344 (62%), Gaps = 22/344 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +LS L L+G TS++EV  S+     L+ + L  CK+   LP  +  ++ L+   L
Sbjct: 486 LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLE-MESLKVFTL 544

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GC+KL+KFP IV +M  L +L LDGT IAE+ SSI  L GLE+L +N CKNL  +PSSI
Sbjct: 545 DGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSI 604

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+N+P+ LGKVESLEE DVSGT+IR+P +SIFL+K+L+ L F G
Sbjct: 605 GCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSFDG 664

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C     +                 P    LPSL+G+CSL  LDL  C L E A+P DI  
Sbjct: 665 CKRIAVN-----------------PTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGC 707

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SLK L L+RNNFV+LP SI+ L  LE L LEDC+ L+SLP++P  +Q +  NGC  L 
Sbjct: 708 LSSLKSLDLSRNNFVSLPRSINKLFGLETLVLEDCRMLESLPEVPSKVQTLNLNGCIRLK 767

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLEL 340
            +   +KL  SK +   CID  +L    G   L ++ML  YL++
Sbjct: 768 EIPDPIKLSSSKRSEFICIDCRELYEHKGQDSLGLTMLERYLQV 811



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++     L  + L  CK+   LP  +  ++ L    L G 
Sbjct: 489 IPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLE-MESLKVFTLDGC 547

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           +K  +FP+I  + + L+E+ L+GT I  L +SI  L G  + ++ +CKNL+S+PS+I  L
Sbjct: 548 TKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCL 607

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +  SGCS+LKN+ E LGKVESLE
Sbjct: 608 KSLKKLDLSGCSELKNIPENLGKVESLE 635



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 16/153 (10%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           C++L    ++FPDIV       ++  DGT I ELS +I  L GL  L++N CKNLE +P 
Sbjct: 547 CTKL----EKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPS 602

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E  + GT+IR  PASI LL    + + 
Sbjct: 603 SIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDVSGTSIRQPPASIFLLKSLKVLSF 662

Query: 760 KDCKNLKSLPS-----TINGLRSLRMMYPSGCS 787
             CK +   P+     +++GL SL ++    C+
Sbjct: 663 DGCKRIAVNPTDQRLPSLSGLCSLEVLDLCACN 695



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 35/182 (19%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--- 180
           +LK +NLS    L   PD  G                        + NL SL   GC   
Sbjct: 468 NLKVINLSNSLNLSKTPDLTG------------------------IPNLSSLILEGCTSL 503

Query: 181 NEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           +E   S   H +L + NL+   +C    +LPS   + SL    L  C   E   P  + N
Sbjct: 504 SEVHPSLGRHKNLQYVNLV---NCKSFRILPSNLEMESLKVFTLDGCTKLE-KFPDIVGN 559

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCS 296
           ++ L EL L+      L +SI  L+ LE L + +CK L+S+P       +L+ +  +GCS
Sbjct: 560 MNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS 619

Query: 297 SL 298
            L
Sbjct: 620 EL 621



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR + P+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 340 GKEIVRCEDPKEPGKRSRLW----TYEDVSLALMDNTGKEK----IEAIF----LDMPGI 387

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S                      D L
Sbjct: 388 KEAQWNMKAFSKMSRLRLLKIDNV-QLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGL 446

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +  NL   P  + G+ +L  +   GC+ L  
Sbjct: 447 VELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSE 505

Query: 792 VTETLGKVESLE 803
           V  +LG+ ++L+
Sbjct: 506 VHPSLGRHKNLQ 517



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 25/164 (15%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNL------ERLPRTISALKYLSTLNLSGLSKFRE 720
           GT IR+   +I LL  L  L+ +GCK +      +RLP ++S L  L  L+L   +  RE
Sbjct: 641 GTSIRQPPASIFLLKSLKVLSFDGCKRIAVNPTDQRLP-SLSGLCSLEVLDLCACN-LRE 698

Query: 721 --FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
              PE       L  + L       LP SI  L G     L+DC+ L+SLP   + +++L
Sbjct: 699 GALPEDIGCLSSLKSLDLSRNNFVSLPRSINKLFGLETLVLEDCRMLESLPEVPSKVQTL 758

Query: 779 RMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVE 822
            +   +GC +LK + +         ++LSS  R    ++F C++
Sbjct: 759 NL---NGCIRLKEIPDP--------IKLSSSKR----SEFICID 787


>gi|105922306|gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
 gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1778

 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 161/366 (43%), Positives = 227/366 (62%), Gaps = 25/366 (6%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G  S++EV  S      L+L+ L  C +L  LP  +  ++ L    LS CSK
Sbjct: 1149 NLESLILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNLE-MESLEVCTLSSCSK 1207

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L KFP IV ++  L +L LDGT+IA++ SS   L GL LL +N CKNL  +PSSI GLKS
Sbjct: 1208 LDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIPSSIRGLKS 1267

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            LK L++S C +L+N+P+ LG+VESLEE D SGT+IR+P +S FL+KNL+ L F GC    
Sbjct: 1268 LKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCK--- 1324

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                    +  NL  +       +LPSL+G+CSL +LDL  C LGE A+P DI  L SL+
Sbjct: 1325 -------RIAVNLTDQ-------ILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLR 1370

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
             L L+RNNF++LP SI+ L  LE+L L+DC  L+SLP++P  +Q V+ +GC  L  +   
Sbjct: 1371 SLNLSRNNFISLPKSINQLSRLEKLALKDCVMLESLPEVPLKVQKVKLDGCLKLKEIPDP 1430

Query: 305  LKLC---RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPK 361
            +KLC   RS++  +NC +      +N + ++ML +YL+    S P     I  PG++IP 
Sbjct: 1431 IKLCSLKRSEFKCLNCWELYMHNGQNNMGLNMLEKYLQ---GSSPRPGFGIAVPGNEIPG 1487

Query: 362  WFMYQN 367
            WF +Q+
Sbjct: 1488 WFTHQS 1493



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 77/118 (65%), Gaps = 1/118 (0%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
            + L  C +L  LP  +  ++ L    LS  SK  +FP+I  + + L E+ L+GTAI  L 
Sbjct: 1177 VNLVNCYSLRILPSNLE-MESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLS 1235

Query: 746  ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +S   L+G +L ++ +CKNL+S+PS+I GL+SL+ +  S CS+LKN+ E LG+VESLE
Sbjct: 1236 SSFHCLAGLVLLSMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLE 1293



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 18/155 (11%)

Query: 646  NCSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
            +CS+L    D+FPDIV       ++  DGT I +LS +   L GLV L++N CKNLE +P
Sbjct: 1204 SCSKL----DKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIP 1259

Query: 699  RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
             +I  LK L  L++S  S+ +  PE     + L E    GT+IR  P S  LL    + +
Sbjct: 1260 SSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLS 1319

Query: 759  LKDCKNL------KSLPSTINGLRSLRMMYPSGCS 787
             K CK +      + LPS ++GL SL  +    C+
Sbjct: 1320 FKGCKRIAVNLTDQILPS-LSGLCSLEELDLCACN 1353



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS------LPVTISSLKCL 54
            +  ++ L +    GTSI + P+S  LL  L++L+ KGCK ++       LP ++S L  L
Sbjct: 1286 LGEVESLEEFDASGTSIRQPPTSFFLLKNLKVLSFKGCKRIAVNLTDQILP-SLSGLCSL 1344

Query: 55   RTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
              L+L  C+  +   P+ +  +  L  L L   +   +P SI  L  LE L L +C  L 
Sbjct: 1345 EELDLCACNLGEGAVPEDIGCLSSLRSLNLSRNNFISLPKSINQLSRLEKLALKDCVMLE 1404

Query: 114  RLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
             LP     ++ +K   L GC KL+ +PD +
Sbjct: 1405 SLPEVPLKVQKVK---LDGCLKLKEIPDPI 1431


>gi|105922722|gb|ABF81433.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1446

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/368 (44%), Positives = 224/368 (60%), Gaps = 24/368 (6%)

Query: 4    MKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            + +L +L L+G TS++EV  S+     LE +TL  C ++  LP  +  ++ L+   L GC
Sbjct: 678  IPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIRILPSNLE-MESLKVCILDGC 736

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            SKL+KFP IV +M  L+ L+LD T I ++ SSI  L GLE+L +N CKNL  +PSSI  L
Sbjct: 737  SKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCL 796

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            KSLK L+LSGC +L+N+P  LGKVE LEE+DVSGT+IR+P +SIFL+K+L+ L   GC  
Sbjct: 797  KSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKR 856

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
               +                 P    LPSL+G+CSL  LDL  C L E A+P DI  L S
Sbjct: 857  IAVN-----------------PTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSS 899

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            LK L L++NNFV+LP SI+ L  LE L LEDC+ L+SLP++P  +Q V  NGC  L  + 
Sbjct: 900  LKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIP 959

Query: 303  GALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
              +KL  SK +   C++   L   NG     ++ML  Y  L+ + +P     I  PG++I
Sbjct: 960  DPIKLSSSKRSEFICLNCWALYEHNGQDSFGLTMLERY--LKGLPNPRPGFGIAVPGNEI 1017

Query: 360  PKWFMYQN 367
            P WF +QN
Sbjct: 1018 PGWFNHQN 1025



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 98/151 (64%), Gaps = 8/151 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L+ L+LD T IT++ SSI  L GLE+L++  CKNL S+P +I  LK L+ L+LS
Sbjct: 746 VGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLS 805

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV------R 114
           GCS+L+  PQ +  +E L ++ + GTSI + P+SI LL  L++L L+ CK +       R
Sbjct: 806 GCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDR 865

Query: 115 LPSSINGLKSLKTLNLSGCCKLEN-VPDTLG 144
           LP S++GL SL+ L+L  C   E  +P+ +G
Sbjct: 866 LP-SLSGLCSLEVLDLCACNLREGALPEDIG 895



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 89/148 (60%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++     L  +TL  C ++  LP  +  ++ L    L G 
Sbjct: 678 IPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIRILPSNLE-MESLKVCILDGC 736

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           SK  +FP+I  + ++L  +HL+ T I  L +SI  L G  + ++ +CKNL+S+PS+I  L
Sbjct: 737 SKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCL 796

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +  SGCS+L+N+ + LGKVE LE
Sbjct: 797 KSLKKLDLSGCSELQNIPQNLGKVEGLE 824



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 16/153 (10%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I +LS +I  L GL  L++N CKNLE +P 
Sbjct: 736 CSKL----EKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPS 791

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  P+     + L EI + GT+IR  PASI LL    + +L
Sbjct: 792 SIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSL 851

Query: 760 KDCKNLKSLPS-----TINGLRSLRMMYPSGCS 787
             CK +   P+     +++GL SL ++    C+
Sbjct: 852 DGCKRIAVNPTGDRLPSLSGLCSLEVLDLCACN 884



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 36/193 (18%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 529 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDSTGKEK----IEAIF----LDMPGI 576

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL- 750
           K  +      S +  L  L ++ + +  E PE  S++ + LE H      + LPA +++ 
Sbjct: 577 KEAQWNMEAFSKMSKLRLLKINNV-QLSEGPEDLSNKLRFLEWH--SYPSKSLPAGLQVD 633

Query: 751 ------LSGNILSNL----KDCKNLK--SLPSTINGLRSLRM--------MYPSGCSKLK 790
                 ++ + +  L    K   NLK  +L +++N +++L          +   GC+ L 
Sbjct: 634 ELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIKTLDFTRIPNLENLILEGCTSLS 693

Query: 791 NVTETLGKVESLE 803
            V  +L + + LE
Sbjct: 694 EVHPSLARHKKLE 706


>gi|224116238|ref|XP_002331995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832119|gb|EEE70596.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 955

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/367 (44%), Positives = 223/367 (60%), Gaps = 24/367 (6%)

Query: 4   MKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + +L +L L+G TS++EV  S+     LE +TL  C ++  LP  +  ++ L+   L GC
Sbjct: 609 IPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIRILPSNLE-MESLKVCILDGC 667

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           SKL+KFP IV +M  L+ L+LD T I ++ SSI  L GLE+L +N CKNL  +PSSI  L
Sbjct: 668 SKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCL 727

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           KSLK L+LSGC +L+N+P  LGKVE LEE+DVSGT+IR+P +SIFL+K+L+ L   GC  
Sbjct: 728 KSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKR 787

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
              +                 P    LPSL+G+CSL  LDL  C L E A+P DI  L S
Sbjct: 788 IAVN-----------------PTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSS 830

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
           LK L L++NNFV+LP SI+ L  LE L LEDC+ L+SLP++P  +Q V  NGC  L  + 
Sbjct: 831 LKSLDLSQNNFVSLPESINQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIP 890

Query: 303 GALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
             +KL  SK +   C++   L   NG     ++ML  Y  L+ + +P     I  PG++I
Sbjct: 891 DPIKLSSSKRSEFICLNCWALYEHNGQDSFGLTMLERY--LKGLPNPRPGFGIAVPGNEI 948

Query: 360 PKWFMYQ 366
           P WF +Q
Sbjct: 949 PGWFNHQ 955



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 98/151 (64%), Gaps = 8/151 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L+ L+LD T IT++ SSI  L GLE+L++  CKNL S+P +I  LK L+ L+LS
Sbjct: 677 VGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCLKSLKKLDLS 736

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV------R 114
           GCS+L+  PQ +  +E L ++ + GTSI + P+SI LL  L++L L+ CK +       R
Sbjct: 737 GCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSLDGCKRIAVNPTGDR 796

Query: 115 LPSSINGLKSLKTLNLSGCCKLEN-VPDTLG 144
           LP S++GL SL+ L+L  C   E  +P+ +G
Sbjct: 797 LP-SLSGLCSLEVLDLCACNLREGALPEDIG 826



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 89/148 (60%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++     L  +TL  C ++  LP  +  ++ L    L G 
Sbjct: 609 IPNLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIRILPSNLE-MESLKVCILDGC 667

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           SK  +FP+I  + ++L  +HL+ T I  L +SI  L G  + ++ +CKNL+S+PS+I  L
Sbjct: 668 SKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPSSIRCL 727

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +  SGCS+L+N+ + LGKVE LE
Sbjct: 728 KSLKKLDLSGCSELQNIPQNLGKVEGLE 755



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 16/153 (10%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I +LS +I  L GL  L++N CKNLE +P 
Sbjct: 667 CSKL----EKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLESIPS 722

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  P+     + L EI + GT+IR  PASI LL    + +L
Sbjct: 723 SIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLKVLSL 782

Query: 760 KDCKNLKSLPS-----TINGLRSLRMMYPSGCS 787
             CK +   P+     +++GL SL ++    C+
Sbjct: 783 DGCKRIAVNPTGDRLPSLSGLCSLEVLDLCACN 815



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 36/193 (18%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 460 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDSTGKEK----IEAIF----LDMPGI 507

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL- 750
           K  +      S +  L  L ++ + +  E PE  S++ + LE H      + LPA +++ 
Sbjct: 508 KEAQWNMEAFSKMSKLRLLKINNV-QLSEGPEDLSNKLRFLEWH--SYPSKSLPAGLQVD 564

Query: 751 ------LSGNILSNL----KDCKNLK--SLPSTINGLRSLRM--------MYPSGCSKLK 790
                 ++ + +  L    K   NLK  +L +++N +++L          +   GC+ L 
Sbjct: 565 ELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIKTLDFTRIPNLENLILEGCTSLS 624

Query: 791 NVTETLGKVESLE 803
            V  +L + + LE
Sbjct: 625 EVHPSLARHKKLE 637


>gi|359493483|ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/414 (39%), Positives = 241/414 (58%), Gaps = 29/414 (7%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L  L L G TS+ EV  SI  L  L  L L+GCK L S   +I  ++ L+ L L
Sbjct: 673  FSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTL 731

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLKKFP++  +ME L  L L+GT+I  +P SIE L GL LL L ECK+L  LP SI
Sbjct: 732  SGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSI 791

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSLKTL LSGC +L+++PD LG ++ L EL+  G+ ++    SI L+ NL+ L  +G
Sbjct: 792  FKLKSLKTLILSGCSELKDLPDNLGSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAG 851

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C +   S S ++   F+    SS    L LPS +G+ SL  L L  C L E A+PSD+ +
Sbjct: 852  C-KGGESKSRNMIFSFH----SSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDLGS 906

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            + SL+ L L+RN+F+T+PAS+SGL  L  L LE CK LQSLP++P +++ + A+ C+SL 
Sbjct: 907  IPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTSLE 966

Query: 300  TL------FGALKLCRSKYTIINCIDSLKLLRKNGLAI-SMLREYLEL-----------Q 341
            T       + + K    ++   NC    +L    G  I   + E ++L           +
Sbjct: 967  TFTCSSSAYTSKKFGDLRFNFTNC---FRLGENQGSDIVGAILEGIQLMSSIPKFLVPDR 1023

Query: 342  AVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
             +  P ++ + + PG++IP+WF +Q+ G S+ +  P + YN  K++G A C   
Sbjct: 1024 GIPTPHNEYNALVPGNRIPEWFRHQSVGCSVNIELPQHWYNT-KLMGLAFCAAL 1076



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 96/146 (65%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G T + E+  +I  L  L+ L L GCK L+    +I  ++ L  L LSG S
Sbjct: 677 PNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCS 735

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  + + L  + LEGTAI+GLP SIE L+G  L NLK+CK+L+SLP +I  L+
Sbjct: 736 KLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLK 795

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL+ +  SGCS+LK++ + LG ++ L
Sbjct: 796 SLKTLILSGCSELKDLPDNLGSLQCL 821



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 20/157 (12%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +GT I+ L L+IE L GL  L L  CK+LE LPR+I  LK L TL LSG S+ ++ P+  
Sbjct: 756 EGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSGCSELKDLPDNL 815

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS------------------ 767
            S   L E++ +G+ ++ +P SI LL+   + +L  CK  +S                  
Sbjct: 816 GSLQCLTELNADGSGVQEVPPSITLLTNLQILSLAGCKGGESKSRNMIFSFHSSPTEELR 875

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTET-LGKVESLE 803
           LPS  +GL SLR++    C+  +    + LG + SLE
Sbjct: 876 LPS-FSGLYSLRVLILQRCNLSEGALPSDLGSIPSLE 911


>gi|298204574|emb|CBI23849.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 195/526 (37%), Positives = 289/526 (54%), Gaps = 40/526 (7%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M +L +L L GT+I  +P SIE L GL LL L+ CK+L SLP  I  LK L+TL LS 
Sbjct: 346 GAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPGCIFKLKSLKTLILSN 405

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CS+LKK P+I  +ME L KL+LD T + E+PSSIE L GL LL L  CK L  LP SI  
Sbjct: 406 CSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICK 465

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+TL LSGC +L+ +PD +G ++ L +L  +GT I+   +SI L+  L  L  +GC 
Sbjct: 466 LTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGC- 524

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDNL 240
           +   S S +L L        S P   + PS   V  SL KL+LS C L E A+PSD+ +L
Sbjct: 525 KGGESKSRNLALCLR-----SSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGALPSDLSSL 579

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
             L+ L L+RN+F+T+P ++S L  L+ L LE CK L+SLP++P N++ + AN C+SL T
Sbjct: 580 SWLECLDLSRNSFITVP-NLSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCTSLET 638

Query: 301 LFG-----ALKLCRS-KYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD---PGHKL- 350
                   A +  R   +   NC   ++  + + +  ++LR    + ++S+   P ++L 
Sbjct: 639 FSNPSSAYAWRNSRHLNFQFYNCFRLVENEQSDNVE-AILRGIRLVASISNFVAPHYELK 697

Query: 351 --SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
               V PGS IP+WF  Q+ G S+TV  P + +   +++G A+C VF  P    G +   
Sbjct: 698 WYDAVVPGSSIPEWFTDQSLGCSVTVELPPH-WCTTRLMGLAVCFVFH-PNIGMGKFGRS 755

Query: 409 SYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSI 468
            Y       SM+ SG G  ++         +DH+W  + P +G  +    + +++SF   
Sbjct: 756 EY------FSMNESG-GFSLHNTASTHFSKADHIWFGYRPLYGEVFSPSIDHLKVSFAGS 808

Query: 469 SDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFV 514
           +     VK+CG   ++     E DE   +        +N VH D++
Sbjct: 809 NRAGEVVKKCGARLVF-----EQDEPCGREEE-----MNHVHEDWL 844



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 123/223 (55%), Gaps = 26/223 (11%)

Query: 647 CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP++   + +       GT I+ L L+IE L GL  L L  CK+LE LP 
Sbjct: 335 CSKL----KKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPG 390

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I  LK L TL LS  S+ ++ PEI  + + L ++ L+ T +R LP+SIE L+G +L  L
Sbjct: 391 CIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKL 450

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFD 819
           K+CK L SLP +I  L SL+ +  SGCS+LK + + +G ++ L          K++ +  
Sbjct: 451 KNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCL---------VKLKANGT 501

Query: 820 CVEQSAVETVTKLAKAELL-----RDSDSWKKNVDKCMKLSTT 857
            + Q    ++T L K E+L     +  +S  +N+  C++ S T
Sbjct: 502 GI-QEVPTSITLLTKLEVLSLAGCKGGESKSRNLALCLRSSPT 543



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 70/100 (70%)

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           L+ L T+ LSG SK ++FPE+  + D L E+ L+GTAI+GLP SIE L+G  L NL++CK
Sbjct: 324 LESLQTITLSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECK 383

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +L+SLP  I  L+SL+ +  S CS+LK + E    +ESL+
Sbjct: 384 SLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLK 423



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M S++ L  L  +GT I EVP+SI LLT LE+L+L GCK   S    ++   CLR+    
Sbjct: 487 MGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGCKGGESKSRNLA--LCLRSSPTK 544

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPSS 118
           G       P  +  +  L KL L G ++ E  +PS +  L  LE L L+   + + +P +
Sbjct: 545 GLR-----PSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSR-NSFITVP-N 597

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           ++ L  LK L L  C  L ++P+    +E L   D +        SS +  +N R L F 
Sbjct: 598 LSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCTSLETFSNPSSAYAWRNSRHLNFQ 657

Query: 179 GCN 181
             N
Sbjct: 658 FYN 660



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 82/167 (49%), Gaps = 20/167 (11%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NCSRL    E  +    + ++  D T +REL  +IE L GLV L L  CK L  LP +I 
Sbjct: 405 NCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESIC 464

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            L  L TL LSG S+ ++ P+   S   L+++   GT I+ +P SI LL+   + +L  C
Sbjct: 465 KLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGC 524

Query: 763 KNLKS-----------------LPSTINGLRSLRMMYPSGCSKLKNV 792
           K  +S                  PS +  L SLR +  SGC+ L+  
Sbjct: 525 KGGESKSRNLALCLRSSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGA 571


>gi|359486071|ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 195/526 (37%), Positives = 289/526 (54%), Gaps = 40/526 (7%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M +L +L L GT+I  +P SIE L GL LL L+ CK+L SLP  I  LK L+TL LS 
Sbjct: 739  GAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPGCIFKLKSLKTLILSN 798

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CS+LKK P+I  +ME L KL+LD T + E+PSSIE L GL LL L  CK L  LP SI  
Sbjct: 799  CSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESICK 858

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L SL+TL LSGC +L+ +PD +G ++ L +L  +GT I+   +SI L+  L  L  +GC 
Sbjct: 859  LTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGC- 917

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDNL 240
            +   S S +L L        S P   + PS   V  SL KL+LS C L E A+PSD+ +L
Sbjct: 918  KGGESKSRNLALCLR-----SSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGALPSDLSSL 972

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
              L+ L L+RN+F+T+P ++S L  L+ L LE CK L+SLP++P N++ + AN C+SL T
Sbjct: 973  SWLECLDLSRNSFITVP-NLSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCTSLET 1031

Query: 301  LFG-----ALKLCRS-KYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD---PGHKL- 350
                    A +  R   +   NC   ++  + + +  ++LR    + ++S+   P ++L 
Sbjct: 1032 FSNPSSAYAWRNSRHLNFQFYNCFRLVENEQSDNVE-AILRGIRLVASISNFVAPHYELK 1090

Query: 351  --SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
                V PGS IP+WF  Q+ G S+TV  P + +   +++G A+C VF  P    G +   
Sbjct: 1091 WYDAVVPGSSIPEWFTDQSLGCSVTVELPPH-WCTTRLMGLAVCFVFH-PNIGMGKFGRS 1148

Query: 409  SYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSI 468
             Y       SM+ SG G  ++         +DH+W  + P +G  +    + +++SF   
Sbjct: 1149 EY------FSMNESG-GFSLHNTASTHFSKADHIWFGYRPLYGEVFSPSIDHLKVSFAGS 1201

Query: 469  SDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFV 514
            +     VK+CG   ++     E DE   +        +N VH D++
Sbjct: 1202 NRAGEVVKKCGARLVF-----EQDEPCGREEE-----MNHVHEDWL 1237



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 96/147 (65%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ +G T + ++  +I  L  L+ L L GCKNL+    +I  L+ L T+ LSG S
Sbjct: 671 PKLRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFSSSIH-LESLQTITLSGCS 729

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  + D L E+ L+GTAI+GLP SIE L+G  L NL++CK+L+SLP  I  L+
Sbjct: 730 KLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPGCIFKLK 789

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  S CS+LK + E    +ESL+
Sbjct: 790 SLKTLILSNCSRLKKLPEIQENMESLK 816



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 26/223 (11%)

Query: 647 CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP++   + +       GT I+ L L+IE L GL  L L  CK+LE LP 
Sbjct: 728 CSKL----KKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPG 783

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I  LK L TL LS  S+ ++ PEI  + + L ++ L+ T +R LP+SIE L+G +L  L
Sbjct: 784 CIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKL 843

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFD 819
           K+CK L SLP +I  L SL+ +  SGCS+LK + + +G ++ L V+L + N   +Q    
Sbjct: 844 KNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCL-VKLKA-NGTGIQE--- 898

Query: 820 CVEQSAVETVTKLAKAELL-----RDSDSWKKNVDKCMKLSTT 857
                   ++T L K E+L     +  +S  +N+  C++ S T
Sbjct: 899 -----VPTSITLLTKLEVLSLAGCKGGESKSRNLALCLRSSPT 936



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 128/318 (40%), Gaps = 59/318 (18%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L+ DG  +  +PS+       +LL LK C   L  L     S + L+ +ELS    L
Sbjct: 605 LRSLHWDGYPLKSLPSNFH---PEKLLELKMCFSQLEQLWEGNKSFQKLKFIELSHSQHL 661

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            K P    +                        P L  + L  C +LV++  SI  LK L
Sbjct: 662 IKTPDFSGA------------------------PKLRRIILEGCTSLVKVHPSIGALKKL 697

Query: 126 KTLN-----------------------LSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
             LN                       LSGC KL+  P+  G +++L EL + GTAI+  
Sbjct: 698 IFLNLEGCKNLKSFSSSIHLESLQTITLSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGL 757

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLT-GVCSLTK 220
             SI  +  L  L    C    +       L     L  S+C     LP +   + SL K
Sbjct: 758 PLSIEYLNGLSLLNLEECKSLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKK 817

Query: 221 LDLSDCGLGEAAIPSDIDNLHS-LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
           L L D GL E  +PS I++L+  +     N     +LP SI  L +L+ L L  C  L+ 
Sbjct: 818 LFLDDTGLRE--LPSSIEHLNGLVLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKK 875

Query: 280 LPQIPPNLQF---VRANG 294
           LP    +LQ    ++ANG
Sbjct: 876 LPDDMGSLQCLVKLKANG 893



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 11/183 (6%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M S++ L  L  +GT I EVP+SI LLT LE+L+L GCK   S    ++   CLR+    
Sbjct: 880  MGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGCKGGESKSRNLAL--CLRSSPTK 937

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPSS 118
            G       P  +  +  L KL L G ++ E  +PS +  L  LE L L+   + + +P +
Sbjct: 938  GLR-----PSFLPVLYSLRKLNLSGCNLLEGALPSDLSSLSWLECLDLSR-NSFITVP-N 990

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
            ++ L  LK L L  C  L ++P+    +E L   D +        SS +  +N R L F 
Sbjct: 991  LSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCTSLETFSNPSSAYAWRNSRHLNFQ 1050

Query: 179  GCN 181
              N
Sbjct: 1051 FYN 1053



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 82/165 (49%), Gaps = 20/165 (12%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NCSRL    E  +    + ++  D T +REL  +IE L GLV L L  CK L  LP +I 
Sbjct: 798 NCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLVLLKLKNCKKLASLPESIC 857

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            L  L TL LSG S+ ++ P+   S   L+++   GT I+ +P SI LL+   + +L  C
Sbjct: 858 KLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEVPTSITLLTKLEVLSLAGC 917

Query: 763 KNLKS-----------------LPSTINGLRSLRMMYPSGCSKLK 790
           K  +S                  PS +  L SLR +  SGC+ L+
Sbjct: 918 KGGESKSRNLALCLRSSPTKGLRPSFLPVLYSLRKLNLSGCNLLE 962


>gi|359493275|ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
 gi|296081003|emb|CBI18507.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 186/526 (35%), Positives = 272/526 (51%), Gaps = 79/526 (15%)

Query: 3    SMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L  LYL  T+I E+PSSI + +TGL LL LK CKNL+SLP  I  LK L  L LSG
Sbjct: 733  NMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKLKSLEYLFLSG 792

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSKL+ FP+I+  ME+L +L LDGTSI  +PSSIE L GL LL L +CK LV LP S+  
Sbjct: 793  CSKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKKLVSLPDSMCN 852

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L+SL+T+ +SGC +L+ +P  +G ++ L +L   GTAIR+P  SI L++ LR L + GC 
Sbjct: 853  LRSLQTIIVSGCSQLDQLPKNVGSLQHLVQLHADGTAIRQPPDSIVLLRGLRVLIYPGCK 912

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
              P+S+   L   + L G+ S  + L LPS   + SLT L+ S C       PS      
Sbjct: 913  ILPSSSLSSLFSFWLLHGRGSNGIGLRLPSFPCLSSLTNLNQSSCN------PS------ 960

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT- 300
                    RNNF+++P SIS L NL +L L  C+ L  +P++PP++  + +  C+SL   
Sbjct: 961  --------RNNFLSIPTSISALTNLRDLWLGQCQNLTEIPELPPSVPDINSRDCTSLSLS 1012

Query: 301  -------------LFGALKLCRSKYTIINCIDSLKLLRKNGLAIS-----------MLRE 336
                          +  LK    ++   +  D+L+    N ++ S           + ++
Sbjct: 1013 SSSISMLQWLQFLFYYCLKPVEEQFN-DDKRDALQRFPDNLVSFSCSEPSPSNFAVVKQK 1071

Query: 337  YLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ 396
            + E  A        S++ PGS IPKW  ++N GS + V  P+  Y+ +  +GFA+C V +
Sbjct: 1072 FFENVA-------FSMILPGSGIPKWIWHRNMGSFVKVKLPTDWYD-DDFLGFAVCSVLE 1123

Query: 397  VPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLFLP---- 448
               H     + H  P      ++D  GE    GH  + +G    V S+H+WL + P    
Sbjct: 1124 ---HVPDRIVCHLSPD-----TLD-YGELRDFGHDFHCKG--SDVSSEHVWLGYQPCAQL 1172

Query: 449  -----RHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVE 489
                    + W         + R  S  +  VK CG   IY  ++E
Sbjct: 1173 RMFQVNDPNEWSHMEISFEATHRLSSRASNMVKECGVRLIYAEDLE 1218



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/273 (38%), Positives = 145/273 (53%), Gaps = 28/273 (10%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L LDG +S+ EV  SI  L  + +L LK CK LSS P +I+ ++ L  L  +GCS+
Sbjct: 665 NLEKLILDGCSSLLEVHPSIGRLKKIIVLNLKNCKQLSSFP-SITDMEALEILNFAGCSE 723

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLK 123
           LKKFP I  +ME L KLYL  T+I E+PSSI + + GL LL L  CKNL  LP+ I  LK
Sbjct: 724 LKKFPDIQCNMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKLK 783

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           SL+ L LSGC KLEN P+ +  +E+L+EL + GT+I    SSI  +K L           
Sbjct: 784 SLEYLFLSGCSKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLV---------- 833

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                        LL    C   + LP S+  + SL  + +S C   +  +P ++ +L  
Sbjct: 834 -------------LLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCSQLD-QLPKNVGSLQH 879

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           L +L+ +       P SI  L  L  L    CK
Sbjct: 880 LVQLHADGTAIRQPPDSIVLLRGLRVLIYPGCK 912



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/158 (43%), Positives = 92/158 (58%), Gaps = 8/158 (5%)

Query: 653 EADEFPDI-------VQVLSDGTDIRELSLAI-ELLFGLVQLTLNGCKNLERLPRTISAL 704
           E  +FPDI       +++    T I EL  +I + + GLV L L  CKNL  LP  I  L
Sbjct: 723 ELKKFPDIQCNMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKL 782

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           K L  L LSG SK   FPEI    + L E+ L+GT+I  LP+SIE L G +L NL+ CK 
Sbjct: 783 KSLEYLFLSGCSKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKK 842

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L SLP ++  LRSL+ +  SGCS+L  + + +G ++ L
Sbjct: 843 LVSLPDSMCNLRSLQTIIVSGCSQLDQLPKNVGSLQHL 880



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 76/110 (69%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M++L +L LDGTSI  +PSSIE L GL LL L+ CK L SLP ++ +L+ L+T+ +S
Sbjct: 803 MEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKKLVSLPDSMCNLRSLQTIIVS 862

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           GCS+L + P+ V S++ L +L+ DGT+I + P SI LL GL +L    CK
Sbjct: 863 GCSQLDQLPKNVGSLQHLVQLHADGTAIRQPPDSIVLLRGLRVLIYPGCK 912



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 96/148 (64%), Gaps = 3/148 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ DG + + E+  +I  L  ++ L L  CK L   P +I+ ++ L  LN +G S
Sbjct: 664 PNLEKLILDGCSSLLEVHPSIGRLKKIIVLNLKNCKQLSSFP-SITDMEALEILNFAGCS 722

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGL 775
           + ++FP+I  + + LL+++L  TAI  LP+SI + ++G +L +LK CKNL SLP+ I  L
Sbjct: 723 ELKKFPDIQCNMEHLLKLYLSSTAIEELPSSIGQHITGLVLLDLKRCKNLTSLPTCIFKL 782

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL  ++ SGCSKL+N  E +  +E+L+
Sbjct: 783 KSLEYLFLSGCSKLENFPEIMEDMENLK 810



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 11/114 (9%)

Query: 647 CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I++       +L DGT I  L  +IE L GLV L L  CK L  LP 
Sbjct: 793 CSKL----ENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGLVLLNLRKCKKLVSLPD 848

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++  L+ L T+ +SG S+  + P+   S   L+++H +GTAIR  P SI LL G
Sbjct: 849 SMCNLRSLQTIIVSGCSQLDQLPKNVGSLQHLVQLHADGTAIRQPPDSIVLLRG 902



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 121/293 (41%), Gaps = 61/293 (20%)

Query: 41  LSSLPVTISSLKCLRTLELSGC-SKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELL 98
           L SLP   SS      +EL  C S LK+  +    +E L+ + +  +  + E+P      
Sbjct: 607 LESLP---SSFYAEDLIELDMCYSSLKQLWESDEPLEKLNTIRVSFSQHLMEIPDFSVRA 663

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L+ C +L+ +  SI  LK +  LNL  C +L + P                  
Sbjct: 664 PNLEKLILDGCSSLLEVHPSIGRLKKIIVLNLKNCKQLSSFP------------------ 705

Query: 159 IRRPTSSIFLMKNLRSLYFSGCN--------------------------EPPASASWHLH 192
                 SI  M+ L  L F+GC+                          E P+S   H+ 
Sbjct: 706 ------SITDMEALEILNFAGCSELKKFPDIQCNMEHLLKLYLSSTAIEELPSSIGQHI- 758

Query: 193 LPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
               LL    C     LP+ +  + SL  L LS C   E   P  ++++ +LKEL L+  
Sbjct: 759 TGLVLLDLKRCKNLTSLPTCIFKLKSLEYLFLSGCSKLE-NFPEIMEDMENLKELLLDGT 817

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           +   LP+SI  L  L  L L  CK+L SLP    N   LQ +  +GCS L  L
Sbjct: 818 SIEVLPSSIERLKGLVLLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCSQLDQL 870


>gi|359493485|ref|XP_003634611.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 824

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 172/440 (39%), Positives = 250/440 (56%), Gaps = 37/440 (8%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-ASMEDLSKLYLDGTSI 88
           L  + L GC +L  L  +I +LK L    L GCSKL+KFP++V  ++E+LS++  +GT+I
Sbjct: 322 LRRIILNGCTSLVKLHPSIGALKELIFPNLEGCSKLEKFPEVVQGNLENLSRISFEGTAI 381

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            E+PSSI  L  L LL L  C+ L  LP SI  L SL+TL LSGC KL+ +PD LG+++ 
Sbjct: 382 RELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 441

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA-L 207
           L EL+V GT I+  TSSI L+ NL +L  +GC    + +        NL+   S P A L
Sbjct: 442 LAELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSR-------NLISFRSSPAAPL 494

Query: 208 MLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
            LP L+G+ SL  L+LSDC L E A+P+D+ +L SL+ LYL++N+F+TLPAS+S L  L+
Sbjct: 495 QLPFLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFITLPASLSRLSRLK 554

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-----FGALKLCRSKYTIINCI---- 318
            L LE CK L+SLP++P +++++ A+ C+SL TL         KL   ++   NC     
Sbjct: 555 RLTLEHCKSLRSLPELPSSIEYLNAHSCASLETLSCSSSTYTSKLGDLRFNFTNCFRLGE 614

Query: 319 ----DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
               D ++ + +     S + + LE    S   H    +  GS+IPKWF +++EGS +  
Sbjct: 615 NQGSDIVETILEGTQLASSMAKLLEPDERSLLQHGYQALVQGSRIPKWFTHRSEGSKVIA 674

Query: 375 TRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGK- 433
             P + YN  K++G A C VF   K +   YL  ++P   L C +D    GHY       
Sbjct: 675 ELPPHWYNT-KLMGLAACVVFNF-KGAVDGYL-GTFP---LACFLD----GHYATLSDHN 724

Query: 434 ----FGHVVSDHLWLLFLPR 449
                  + SDH W  ++ R
Sbjct: 725 SLWTSSIIESDHTWFAYISR 744



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 111/196 (56%), Gaps = 17/196 (8%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            ++++LS +  +GT+I E+PSSI  L  L LL L+ C+ L+SLP +I  L  L+TL LSG
Sbjct: 366 GNLENLSRISFEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSG 425

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-------NLVR 114
           CSKLKK P  +  ++ L++L +DGT I EV SSI LL  LE L L  CK       NL+ 
Sbjct: 426 CSKLKKLPDDLGRLQCLAELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLIS 485

Query: 115 LPSS---------INGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSGTAIRRPTS 164
             SS         ++GL SLK+LNLS C  LE  +P  L  + SLE L +   +     +
Sbjct: 486 FRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFITLPA 545

Query: 165 SIFLMKNLRSLYFSGC 180
           S+  +  L+ L    C
Sbjct: 546 SLSRLSRLKRLTLEHC 561



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-DQLLEIHLEGTAI 741
           L ++ LNGC +L +L  +I ALK L   NL G SK  +FPE+     + L  I  EGTAI
Sbjct: 322 LRRIILNGCTSLVKLHPSIGALKELIFPNLEGCSKLEKFPEVVQGNLENLSRISFEGTAI 381

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           R LP+SI  L+  +L NL++C+ L SLP +I  L SL+ +  SGCSKLK + + LG+++ 
Sbjct: 382 RELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 441

Query: 802 L 802
           L
Sbjct: 442 L 442



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 20/156 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK----------NLSSLPVT--- 47
           +  ++ L++L +DGT I EV SSI LLT LE L+L GCK          +  S P     
Sbjct: 436 LGRLQCLAELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQ 495

Query: 48  ---ISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
              +S L  L++L LS C+ L+   P  ++S+  L  LYLD  S   +P+S+  L  L+ 
Sbjct: 496 LPFLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFITLPASLSRLSRLKR 555

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           L L  CK+L  LP   +   S++ LN   C  LE +
Sbjct: 556 LTLEHCKSLRSLPELPS---SIEYLNAHSCASLETL 588



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 17/159 (10%)

Query: 647 CSRLWEEADEFPDIVQ--------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           CS+L    ++FP++VQ        +  +GT IREL  +I  L  LV L L  C+ L  LP
Sbjct: 354 CSKL----EKFPEVVQGNLENLSRISFEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLP 409

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
           ++I  L  L TL LSG SK ++ P+       L E++++GT I+ + +SI LL+     +
Sbjct: 410 QSICELISLQTLTLSGCSKLKKLPDDLGRLQCLAELNVDGTGIKEVTSSINLLTNLEALS 469

Query: 759 LKDCKNLKSLPSTINGLRS-----LRMMYPSGCSKLKNV 792
           L  CK   S    +   RS     L++ + SG   LK++
Sbjct: 470 LAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSL 508



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 20/143 (13%)

Query: 647 CSRLWEEADEFPDI---VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-- 701
           CS+L +  D+   +    ++  DGT I+E++ +I LL  L  L+L GCK      R +  
Sbjct: 426 CSKLKKLPDDLGRLQCLAELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLIS 485

Query: 702 --------------SALKYLSTLNLSGLSKFR-EFPEITSSRDQLLEIHLEGTAIRGLPA 746
                         S L  L +LNLS  +      P   SS   L  ++L+  +   LPA
Sbjct: 486 FRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPTDLSSLSSLENLYLDKNSFITLPA 545

Query: 747 SIELLSGNILSNLKDCKNLKSLP 769
           S+  LS      L+ CK+L+SLP
Sbjct: 546 SLSRLSRLKRLTLEHCKSLRSLP 568


>gi|224114295|ref|XP_002332392.1| predicted protein [Populus trichocarpa]
 gi|222832715|gb|EEE71192.1| predicted protein [Populus trichocarpa]
          Length = 350

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/348 (44%), Positives = 203/348 (58%), Gaps = 34/348 (9%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           ++ L+   L GCSKL+KFP IV +M  L  L LD T I ++ SSI  L GL LL +N CK
Sbjct: 1   MESLKVFTLDGCSKLEKFPDIVGNMNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCK 60

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
            L  +PSSI  LKSLK L+LSGC +L+ + + LGKVESLEE DVSGT IR+  +S+FL+K
Sbjct: 61  TLESIPSSIGCLKSLKKLDLSGCSELKYLTENLGKVESLEEFDVSGTLIRQLPASVFLLK 120

Query: 171 NLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
           NL+ L   GC                           +LPSL+G+CSL  L L  C L E
Sbjct: 121 NLKVLSLDGCKR-----------------------IAVLPSLSGLCSLEVLGLRACNLRE 157

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
            A+  DI  L SL+ L L++NNFV+LP SI+ L  LE L LE C  LQSL ++P  +Q V
Sbjct: 158 GALLEDIGCLSSLRSLDLSQNNFVSLPKSINKLSELEMLVLEGCTMLQSLLEVPSKVQIV 217

Query: 291 RANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPG 347
             NGC SL T+   + L  SK +   C++  +L   NG   + + ML  Y  LQ +S+P 
Sbjct: 218 NLNGCISLKTIPDPITLSSSKRSEFICLNCWELYYHNGQDNMGLMMLERY--LQGLSNPR 275

Query: 348 HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
               IV PG++IP WF +Q++GSSI+V  PS+       +GF  C  F
Sbjct: 276 PGFGIVVPGNEIPGWFNHQSKGSSISVQVPSW------SIGFVACVAF 317



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 84/133 (63%), Gaps = 1/133 (0%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L  L LD T IT++ SSI  L GL LL++  CK L S+P +I  LK L+ L+LS
Sbjct: 22  VGNMNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKTLESIPSSIGCLKSLKKLDLS 81

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GCS+LK   + +  +E L +  + GT I ++P+S+ LL  L++L L+ CK +  LP S++
Sbjct: 82  GCSELKYLTENLGKVESLEEFDVSGTLIRQLPASVFLLKNLKVLSLDGCKRIAVLP-SLS 140

Query: 121 GLKSLKTLNLSGC 133
           GL SL+ L L  C
Sbjct: 141 GLCSLEVLGLRAC 153



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 21/199 (10%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I +LS +I  L GL  L++N CK LE +P 
Sbjct: 12  CSKL----EKFPDIVGNMNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKTLESIPS 67

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +   E     + L E  + GT IR LPAS+ LL    + +L
Sbjct: 68  SIGCLKSLKKLDLSGCSELKYLTENLGKVESLEEFDVSGTLIRQLPASVFLLKNLKVLSL 127

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFD 819
             CK +  LPS ++GL SL ++    C    N+ E    +E +    S  +    QN+F 
Sbjct: 128 DGCKRIAVLPS-LSGLCSLEVLGLRAC----NLREG-ALLEDIGCLSSLRSLDLSQNNF- 180

Query: 820 CVEQSAVETVTKLAKAELL 838
               S  +++ KL++ E+L
Sbjct: 181 ---VSLPKSINKLSELEML 196



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 65/100 (65%)

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           ++ L    L G SK  +FP+I  + ++L+ + L+ T I  L +SI  L G  L ++  CK
Sbjct: 1   MESLKVFTLDGCSKLEKFPDIVGNMNKLMVLRLDETGITKLSSSIHHLIGLGLLSMNSCK 60

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            L+S+PS+I  L+SL+ +  SGCS+LK +TE LGKVESLE
Sbjct: 61  TLESIPSSIGCLKSLKKLDLSGCSELKYLTENLGKVESLE 100


>gi|37781356|gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 159/384 (41%), Positives = 235/384 (61%), Gaps = 16/384 (4%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 660  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 718

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M  L++LYLD TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 719  MNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KL+N+PD LG +  LE+L  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 779  KLKNLPDDLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSH-- 836

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                G+ S  V     +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 837  ----GQKSMGVNFQ--NLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFS 890

Query: 255  TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL-CRSKY 312
             +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++    K    S  
Sbjct: 891  NIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKGIYANECTSLMSIDQLTKYPMLSDA 950

Query: 313  TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGS-S 371
            +  NC   +K  +   +  S+L++ LE   ++    +     PG +IP+WF Y++ G+ S
Sbjct: 951  SFRNCRQLVKNKQHTSMVDSLLKQMLEALYMNV---RFGFYVPGMEIPEWFTYKSWGTQS 1007

Query: 372  ITVTRPSYLYNVNKVVGFAICCVF 395
            ++V  P+  +      GF +C VF
Sbjct: 1008 MSVALPTN-WLTPTFRGFTVCVVF 1030



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 92/141 (65%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 655 VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 713

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L+ T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 714 EIEEKMNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 773

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKLKN+ + LG +  LE
Sbjct: 774 VSGCSKLKNLPDDLGLLVGLE 794



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYLD TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 719 MNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L+ C  L  ++ SS +G 
Sbjct: 779 KLKNLPDDLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSHGQ 838

Query: 123 KSLKT--LNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+     NLSG C L        N+ D      LG + SLE L + G      P +SI 
Sbjct: 839 KSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFSNIPAASIS 898

Query: 168 LMKNLRSLYFSGC 180
            +  L++L   GC
Sbjct: 899 RLTRLKTLKLLGC 911



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 11/222 (4%)

Query: 64  KLKK--FPQIVASMEDLSKL-YLD---GTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
           KLKK    Q+  + +DL KL Y++      +  +P    + P LE L L EC +LV +  
Sbjct: 609 KLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPD-FSVTPNLERLVLEECTSLVEINF 667

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN-LRSLY 176
           SI  L  L  LNL  C  L+ +P  + ++E LE L ++G +  R    I    N L  LY
Sbjct: 668 SIENLGKLVLLNLKNCRNLKTLPKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELY 726

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPS 235
               +     AS        ++  S C     LP S+  +  L  LD+S C      +P 
Sbjct: 727 LDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS-KLKNLPD 785

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           D+  L  L++L+       T+P+S+S L NL+ L L  C  L
Sbjct: 786 DLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSLSGCNAL 827



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 11/126 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++       D T + EL  ++E L G+  + L+ CK+LE LP 
Sbjct: 706 CSKL----RTFPEIEEKMNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPS 761

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL++SG SK +  P+       L ++H   TAI+ +P+S+ LL      +L
Sbjct: 762 SIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLKRLSL 821

Query: 760 KDCKNL 765
             C  L
Sbjct: 822 SGCNAL 827



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 59/227 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTD-IRELSLAI----ELLFG---L 683
           G   VRR++  +P  CSRLW+  D  P + + L  GTD I  +SL +    E+ FG    
Sbjct: 499 GWHIVRREATDDPRMCSRLWKREDICPVLERNL--GTDKIEGMSLHLTNEEEVNFGGKAF 556

Query: 684 VQLT---------LNGCKNLERLP------------------------------------ 698
           +Q+T            C+  E LP                                    
Sbjct: 557 MQMTRLRFLKFQNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVSLKLKKSRII 616

Query: 699 ---RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
              +T   L  L  +NLS   K    P+ + + +    +  E T++  +  SIE L   +
Sbjct: 617 QLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLVEINFSIENLGKLV 676

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L NLK+C+NLK+LP  I  L  L ++  +GCSKL+   E   K+  L
Sbjct: 677 LLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEKMNCL 722


>gi|37781280|gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/384 (40%), Positives = 230/384 (59%), Gaps = 16/384 (4%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 660  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 718

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M  L++LYL  TS++ +P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 719  MNCLAELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KL+N+PD LG +  LE+L  + TAI    SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 779  KLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSH-- 836

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                G+ S  V     +L+G+CSL +LDLSDC + +  I  ++  L SLK L L+ NNF 
Sbjct: 837  ----GQKSMGVNFQ--NLSGLCSLIRLDLSDCDISDGGILRNLGFLSSLKVLLLDGNNFS 890

Query: 255  TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL-CRSKY 312
             +P ASIS L  L+ L L  C RL+SLP++PP++  + A+ C+SL+++    K    S  
Sbjct: 891  NIPAASISRLTRLKSLALRGCGRLESLPELPPSITGIYAHDCTSLMSIDQLTKYPMLSDV 950

Query: 313  TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGS-S 371
            +  NC   +K  +   +  S+L++ LE   ++    +  +  PG +IP+WF Y++ G+ S
Sbjct: 951  SFRNCHQLVKNKQHTSMVDSLLKQMLEALYMNV---RFGLYVPGMEIPEWFTYKSWGTQS 1007

Query: 372  ITVTRPSYLYNVNKVVGFAICCVF 395
            ++V  P+  +      GF +C +F
Sbjct: 1008 MSVVLPTNWFTPT-FRGFTVCVLF 1030



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/141 (46%), Positives = 92/141 (65%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 655 VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 713

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++ GLPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 714 EIEEKMNCLAELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 773

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKLKN+ + LG +  LE
Sbjct: 774 VSGCSKLKNLPDDLGLLVGLE 794



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 11/126 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++         T +  L  ++E L G+  + L+ CK+LE LP 
Sbjct: 706 CSKL----RTFPEIEEKMNCLAELYLGATSLSGLPASVENLSGVGVINLSYCKHLESLPS 761

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL++SG SK +  P+       L ++H   TAI  +P+S+ LL      +L
Sbjct: 762 SIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSL 821

Query: 760 KDCKNL 765
           + C  L
Sbjct: 822 RGCNAL 827



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 94/227 (41%), Gaps = 59/227 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRE-LSLAI----ELLFG---L 683
           G   VRR++  +P  CSRLW+  D  P + + L  GTD  E +SL +    E+ FG    
Sbjct: 499 GWHIVRREATDDPRMCSRLWKREDICPVLERNL--GTDKNEGMSLHLTNEEEVNFGGKAF 556

Query: 684 VQLT---------LNGCKNLERLP------------------------------------ 698
           +Q+T            C+  E LP                                    
Sbjct: 557 MQMTRLRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVGLKLKKSRII 616

Query: 699 ---RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
              +T   L  L  +NLS   K    P+ + + +    +  E T++  +  SIE L   +
Sbjct: 617 QLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGKLV 676

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L NLK+C+NLK+LP  I  L  L ++  +GCSKL+   E   K+  L
Sbjct: 677 LLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEKMNCL 722


>gi|224116168|ref|XP_002331978.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832102|gb|EEE70579.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1028

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 184/491 (37%), Positives = 250/491 (50%), Gaps = 81/491 (16%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G  S++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 422 LTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNLE-MESLKFFTL 480

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+ FP IV +M  L KL LD T IAE+  SI  + GLE+L +N CK L  +  SI
Sbjct: 481 DGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSI 540

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+N+P  L KVESLEE DVSGT+IR+  +SIFL+KNL  L   G
Sbjct: 541 ECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDG 600

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                                      L  C L   A+P DI  
Sbjct: 601 -------------------------------------------LRACNL--RALPEDIGC 615

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SLK L L+RNNFV+LP SI+ L  LE+L LEDC  L+SL ++P  +Q V  NGC SL 
Sbjct: 616 LSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLEVPSKVQTVNLNGCISLK 675

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
           T+   +KL  S+ +   C+D  +L   NG   +   ML  Y  LQ +S+P     IV PG
Sbjct: 676 TIPDPIKLSSSQRSEFMCLDCWELYEHNGQDSMGSIMLERY--LQGLSNPRPGFRIVVPG 733

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           ++IP WF +Q++ SSI+V  PS+       +GF  C  F             +Y    L 
Sbjct: 734 NEIPGWFNHQSKESSISVQVPSW------SMGFVACVAFS------------AYGESPLF 775

Query: 417 CSMDGSGEGHY---IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSI 468
           C    +G  +Y   +    K   + SDH+WL +L     +    WQ  S + I LSF S 
Sbjct: 776 CHFKANGRENYPSPMCLSCKV--LFSDHIWLFYLSFDYLKELKEWQHGSFSNIELSFHSY 833

Query: 469 SDPTWKVKRCG 479
                KVK CG
Sbjct: 834 ERGV-KVKNCG 843



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 36/188 (19%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FPDIV  ++       D T I ELS +I  + GL  L++N CK LE + R
Sbjct: 483 CSKL----ENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISR 538

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI---L 756
           +I  LK L  L+LSG S+ +  P      + L E  + GT+IR LPASI LL       L
Sbjct: 539 SIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSL 598

Query: 757 SNLKDC----------------------KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             L+ C                       N  SLP +IN L  L  +    C+ L+++ E
Sbjct: 599 DGLRACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLE 658

Query: 795 TLGKVESL 802
              KV+++
Sbjct: 659 VPSKVQTV 666



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  C+++  LP  +  ++ L    L G SK   FP+I  + + L+++ L+ T I 
Sbjct: 452 LQYVNLINCRSIRILPSNLE-MESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIA 510

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L  SI  + G  + ++ +CK L+S+  +I  L+SL+ +  SGCS+LKN+   L KVESL
Sbjct: 511 ELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESL 570

Query: 803 E 803
           E
Sbjct: 571 E 571



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 276 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----LDIPGI 323

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L ++ + +  E PE  S++                    D+L
Sbjct: 324 KEAQWNMKAFSKMSKLRLLKINNV-QLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDEL 382

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +   L   P  + G+ +L  +   GC  L  
Sbjct: 383 VELHMANSSIEQLWYGYKSAVKLKIINLSNSLYLSKSPD-LTGIPNLESLILEGCISLSE 441

Query: 792 VTETLGKVESLE 803
           V  +LG+ + L+
Sbjct: 442 VHPSLGRHKKLQ 453


>gi|37781360|gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 163/403 (40%), Positives = 235/403 (58%), Gaps = 21/403 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + M +L  L L+   S+ E+  SI  L  L LL LK C+NL +LP  I  L+ L  L L
Sbjct: 479 FSVMPNLERLVLEECKSLVEINFSIGDLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVL 537

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKL+ FP+I   M  L++LYL  T+++E+ +S+E L G+ ++ L  CK+L  LPSSI
Sbjct: 538 SGCSKLRTFPEIEEKMNCLAELYLGATALSELSASVENLSGVGVINLCYCKHLESLPSSI 597

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK LKTL++SGC KL+N+PD LG +  LEE   + TAI+   SSI L+KNL+ L   G
Sbjct: 598 FRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEEFHCTHTAIQTIPSSISLLKNLKHLSLRG 657

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           CN   +  S   H      G+ S  V +   +L+G+CSL  LDLSDC + +  I S++  
Sbjct: 658 CNALSSQVSSSSH------GQKS--VGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGF 709

Query: 240 LHSLKELYLNRNNFVTLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           L SL  L L+ NNF  +P ASIS L  LE L L  C+RL+SLP++PP+++ + A+ C+SL
Sbjct: 710 LPSLAGLILDGNNFSNIPAASISRLTRLEILALAGCRRLESLPELPPSIKEIYADECTSL 769

Query: 299 VTLFGALKLCRSKYTIINCIDSLKL--LRKNGLAISMLREYL-ELQAVSDPGHKLSIVFP 355
           +++        +KY++++ +   K   L  N    SM+   L ++          S+  P
Sbjct: 770 MSIDQL-----TKYSMLHEVSFTKCHQLVTNKQHASMVDSLLKQMHKGLYLNGSFSMYIP 824

Query: 356 GSQIPKWFMYQNEGS-SITVTRPSYLYNVNKVVGFAICCVFQV 397
           G +IP+WF Y+N G+ SI+V  P   Y      G AIC VF +
Sbjct: 825 GVEIPEWFTYKNSGTESISVALPKNWYTPT-FRGIAICVVFDM 866



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 88/141 (62%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL +   + E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK R FP
Sbjct: 489 VLEECKSLVEINFSIGDLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFP 547

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  TA+  L AS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 548 EIEEKMNCLAELYLGATALSELSASVENLSGVGVINLCYCKHLESLPSSIFRLKCLKTLD 607

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKLKN+ + LG +  LE
Sbjct: 608 VSGCSKLKNLPDDLGLLVGLE 628



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 11/126 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++         T + ELS ++E L G+  + L  CK+LE LP 
Sbjct: 540 CSKL----RTFPEIEEKMNCLAELYLGATALSELSASVENLSGVGVINLCYCKHLESLPS 595

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL++SG SK +  P+       L E H   TAI+ +P+SI LL      +L
Sbjct: 596 SIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEEFHCTHTAIQTIPSSISLLKNLKHLSL 655

Query: 760 KDCKNL 765
           + C  L
Sbjct: 656 RGCNAL 661


>gi|359493496|ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/383 (42%), Positives = 229/383 (59%), Gaps = 23/383 (6%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-ASMEDLSKLYLDGTSI 88
            L  + L GC +L  L  +I +LK L  L L GCSKL+KFP++V  ++EDLS + L+GT+I
Sbjct: 682  LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 741

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             E+PSSI  L  L LL L  CK L  LP SI  L SL+TL LSGC KL+ +PD LG+++ 
Sbjct: 742  RELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 801

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L EL V GT I+   SSI L+ NL+ L  +GC +   S SW+L   F   G       L 
Sbjct: 802  LVELHVDGTGIKEVPSSINLLTNLQELSLAGC-KGWESKSWNLAFSF---GSWPTLEPLR 857

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
            LP L+G+ SL  L+LSDC L E A+P D+ +L SL+ L L+RN+F+T+PA++SGL  L  
Sbjct: 858  LPRLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPANLSGLSRLHV 917

Query: 269  LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK------YTIINCI---- 318
            L L  CK LQSLP++P +++++ A  C+SL T   +   C SK          NC     
Sbjct: 918  LMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYGGLRLEFSNCFRLME 977

Query: 319  ----DSLKLLRKNGLAISMLREYLE--LQAVSDPGHKL-SIVFPGSQIPKWFMYQNEGSS 371
                DS+K +      ++ + ++L+  L    D  H L   + PGS+IP+WF+ Q+ GSS
Sbjct: 978  NEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDGPHNLYDAIVPGSRIPEWFVDQSTGSS 1037

Query: 372  ITVTRPSYLYNVNKVVGFAICCV 394
            +TV  P + YN  K++G A+C V
Sbjct: 1038 VTVELPPHWYNT-KLMGMAVCAV 1059



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 95/157 (60%), Gaps = 20/157 (12%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +++DLS + L+GT+I E+PSSI  L  L LL L+ CK L+SLP +I  L  L+TL LSG
Sbjct: 726 GNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSG 785

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-------NL-- 112
           CSKLKK P  +  ++ L +L++DGT I EVPSSI LL  L+ L L  CK       NL  
Sbjct: 786 CSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAF 845

Query: 113 ----------VRLPSSINGLKSLKTLNLSGCCKLENV 139
                     +RLP  ++GL SLK LNLS C  LE  
Sbjct: 846 SFGSWPTLEPLRLP-RLSGLYSLKILNLSDCNLLEGA 881



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-DQLLEIHLEGTAI 741
           L ++ LNGC +L +L  +I ALK L  LNL G SK  +FPE+     + L  I LEGTAI
Sbjct: 682 LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 741

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           R LP+SI  L+  +L NL++CK L SLP +I  L SL+ +  SGCSKLK + + LG+++ 
Sbjct: 742 RELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 801

Query: 802 L 802
           L
Sbjct: 802 L 802



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 107/241 (44%), Gaps = 28/241 (11%)

Query: 41  LSSLPVTISSLKCLRTLELSGC-SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
           L SLP      K +   EL+ C S LK+  +   + E L  + L  +            P
Sbjct: 624 LKSLPSIFHPKKLV---ELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAP 680

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL-GKVESLEELDVSGTA 158
            L  + LN C +LV+L  SI  LK L  LNL GC KLE  P+ + G +E L  + + GTA
Sbjct: 681 KLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTA 740

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           IR   SSI  +  L  L    C +                      +A +  S+  + SL
Sbjct: 741 IRELPSSIGGLNRLVLLNLRNCKK----------------------LASLPQSICELISL 778

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
             L LS C      +P D+  L  L EL+++      +P+SI+ L NL+EL L  CK  +
Sbjct: 779 QTLTLSGCS-KLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWE 837

Query: 279 S 279
           S
Sbjct: 838 S 838



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 12/129 (9%)

Query: 647 CSRLWEEADEFPDIVQ--------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           CS+L    ++FP++VQ        +  +GT IREL  +I  L  LV L L  CK L  LP
Sbjct: 714 CSKL----EKFPEVVQGNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLP 769

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
           ++I  L  L TL LSG SK ++ P+       L+E+H++GT I+ +P+SI LL+     +
Sbjct: 770 QSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELS 829

Query: 759 LKDCKNLKS 767
           L  CK  +S
Sbjct: 830 LAGCKGWES 838



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 24/157 (15%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L +L++DGT I EVPSSI LLT L+ L+L GCK   S                 
Sbjct: 796 LGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSFGSWPTLEP 855

Query: 44  --LPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
             LP  +S L  L+ L LS C+ L+   P  ++S+  L  L L   S   +P+++  L  
Sbjct: 856 LRLP-RLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPANLSGLSR 914

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
           L +L L  CK+L  LP   +   S++ LN   C  LE
Sbjct: 915 LHVLMLPYCKSLQSLPELPS---SIRYLNAEACTSLE 948



 Score = 39.7 bits (91), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 27/170 (15%)

Query: 647 CSRLWEEADEFPDI---VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLE-------- 695
           CS+L +  D+   +   V++  DGT I+E+  +I LL  L +L+L GCK  E        
Sbjct: 786 CSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAF 845

Query: 696 -----------RLPRTISALKYLSTLNLSGLSKFR-EFPEITSSRDQLLEIHLEGTAIRG 743
                      RLPR +S L  L  LNLS  +      P   SS   L  + L   +   
Sbjct: 846 SFGSWPTLEPLRLPR-LSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFIT 904

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           +PA++  LS   +  L  CK+L+SLP   +   S+R +    C+ L+  +
Sbjct: 905 IPANLSGLSRLHVLMLPYCKSLQSLPELPS---SIRYLNAEACTSLETFS 951


>gi|225460354|ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 189/528 (35%), Positives = 282/528 (53%), Gaps = 45/528 (8%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G TS+ +V  SI  L  L  L L+GCKNL S   +I  +  L+ L LSGCSK
Sbjct: 652  NLERLILEGCTSMVKVHPSIGALQKLIFLNLEGCKNLKSFASSIH-MNSLQILTLSGCSK 710

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            LKKFP+++ +M+ L +L LD T++ E+PSSI  L GL LL L  CK LV LP S+  L S
Sbjct: 711  LKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTS 770

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L+ L L+GC +L+ +PD LG +  L  L+  G+ I+    SI L+ NL+ L  +GC +  
Sbjct: 771  LQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKR- 829

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                   ++ F+L   SS  V L L SL  + S+  L LSDC L E A+PSD+ +L SL+
Sbjct: 830  -------NVVFSLW--SSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLE 880

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
             L L++NNF+T+PAS++ L  L  L L  CK LQS+P++P  +Q V A+ C SL T   +
Sbjct: 881  SLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETF--S 938

Query: 305  LKLCRSK------YTIINCI--------DSLKLLRKNGLAISMLREYLELQAVSD-PGHK 349
            L  C S+      +T  +C         D++  + +     S + ++++    S  P + 
Sbjct: 939  LSACASRKLNQLNFTFSDCFRLVENEHSDTVGAILQGIQLASSIPKFVDANKGSPVPYND 998

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF-- 407
              ++ PGS IP+WF++QN GSS+TV  P + YN  K++G A+C VF       G   +  
Sbjct: 999  FHVIVPGSSIPEWFIHQNMGSSVTVELPPHWYNA-KLMGLAVCAVFHADPIDWGYLQYSL 1057

Query: 408  ----HSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGH-NWQFESNLIR 462
                H Y ++ L+      G+  +  ++   G    D +W  F  R G     F  + I+
Sbjct: 1058 YRGEHKYDSYMLQTWSPMKGDHVWFGYQSLVGQ-EDDRMW--FGERSGTLKILFSGHCIK 1114

Query: 463  LSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVH 510
                 +  P   VK+CG    Y    E+ D+  + S  + +  L E H
Sbjct: 1115 SCIVCVQ-PEVVVKKCGVRLAY----EQGDKDGECSFPYGTIWLGEGH 1157



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 86/146 (58%), Gaps = 14/146 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +MK L  L LD T++ E+PSSI  L GL LL L  CK L SLP ++  L  L+ L L+
Sbjct: 718 LENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLA 777

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--NLV----- 113
           GCS+LKK P  + S+  L  L  DG+ I EVP SI LL  L++L L  CK  N+V     
Sbjct: 778 GCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWS 837

Query: 114 ------RLPSSINGLKSLKTLNLSGC 133
                 +L S +N L S+KTL+LS C
Sbjct: 838 SPTVCLQLRSLLN-LSSVKTLSLSDC 862



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 91/146 (62%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T + ++  +I  L  L+ L L GCKNL+    +I  +  L  L LSG S
Sbjct: 651 PNLERLILEGCTSMVKVHPSIGALQKLIFLNLEGCKNLKSFASSIH-MNSLQILTLSGCS 709

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  +   L ++ L+ TA+R LP+SI  L+G +L NL +CK L SLP ++  L 
Sbjct: 710 KLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLT 769

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL+++  +GCS+LK + + LG +  L
Sbjct: 770 SLQILTLAGCSELKKLPDELGSLRCL 795



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 17/145 (11%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP+++       Q+L D T +REL  +I  L GLV L L  CK L  LP+
Sbjct: 708 CSKL----KKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQ 763

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           ++  L  L  L L+G S+ ++ P+   S   L+ ++ +G+ I+ +P SI LL+   + +L
Sbjct: 764 SLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSL 823

Query: 760 KDCK------NLKSLPSTINGLRSL 778
             CK      +L S P+    LRSL
Sbjct: 824 AGCKKRNVVFSLWSSPTVCLQLRSL 848


>gi|37781278|gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/455 (37%), Positives = 253/455 (55%), Gaps = 36/455 (7%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            TS+ E+  SI  L  L LL LK C+NL ++P  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 660  TSLVEINFSIGDLGKLVLLNLKNCRNLKTIPKRIR-LEKLEVLVLSGCSKLRTFPEIEEK 718

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M  L++LYL  TS++E+P+S+E   G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 719  MNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KL+N+PD LG +  +E+L  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 779  KLKNLPDDLGLLVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSH-- 836

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                G+ S  +     +L+G+CSL KLDLSDC + +  I S++  L SLK L L+ NNF 
Sbjct: 837  ----GQKSMGINF-FQNLSGLCSLIKLDLSDCNISDGGILSNLGLLPSLKVLILDGNNFS 891

Query: 255  TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV-----TLFGALKLC 308
             +P ASIS L  L+ L L  C  L+ LP++PP+++ + AN  +SL+     T F  L   
Sbjct: 892  NIPAASISRLTRLKCLALHGCTSLEILPKLPPSIKGIYANESTSLMGFDQLTEFPML--- 948

Query: 309  RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNE 368
             S+ ++  C   +K      +A  +L+E LE   ++    +  +  PG +IP+WF Y+N 
Sbjct: 949  -SEVSLAKCHQLVKNKLHTSMADLLLKEMLEALYMN---FRFCLYVPGMEIPEWFTYKNW 1004

Query: 369  GS-SITVTRPSYLYNVNKVVGFAICCVF--QVPKHSTGTYLFHSYPAHELECSMDGSGEG 425
            G+ SI+V  P+  +      GF +C V   ++P    G +  H     ++  S    G  
Sbjct: 1005 GTESISVALPTNWFTPT-FRGFTVCVVLDKRIP-FILGPFNIHIVHGLKISTSFGPIGSE 1062

Query: 426  HYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNL 460
            +     G  G+ +  H+        G +WQ E +L
Sbjct: 1063 N----PGGLGNTLITHV------PFGSHWQLEDDL 1087



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 108/198 (54%), Gaps = 25/198 (12%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E  +G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 719 MNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL----------- 112
           KLK  P  +  +  + KL+   T+I  +PSS+ LL  L+ L L+ C  L           
Sbjct: 779 KLKNLPDDLGLLVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSHGQ 838

Query: 113 ----VRLPSSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-P 162
               +    +++GL SL  L+LS C    N+ D      LG + SL+ L + G      P
Sbjct: 839 KSMGINFFQNLSGLCSLIKLDLSDC----NISDGGILSNLGLLPSLKVLILDGNNFSNIP 894

Query: 163 TSSIFLMKNLRSLYFSGC 180
            +SI  +  L+ L   GC
Sbjct: 895 AASISRLTRLKCLALHGC 912



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 90/141 (63%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ +P+ I  L+ L  L LSG SK R FP
Sbjct: 655 VLEECTSLVEINFSIGDLGKLVLLNLKNCRNLKTIPKRIR-LEKLEVLVLSGCSKLRTFP 713

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  T++  LPAS+E  SG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 714 EIEEKMNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 773

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKLKN+ + LG +  +E
Sbjct: 774 VSGCSKLKNLPDDLGLLVGIE 794



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 11/222 (4%)

Query: 64  KLKK--FPQIVASMEDLSKL-YLD---GTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
           KLKK    Q+  + +DL KL Y++      +  +P    + P LE L L EC +LV +  
Sbjct: 609 KLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPD-FSVTPNLERLVLEECTSLVEINF 667

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-FLMKNLRSLY 176
           SI  L  L  LNL  C  L+ +P  + ++E LE L +SG +  R    I   M  L  LY
Sbjct: 668 SIGDLGKLVLLNLKNCRNLKTIPKRI-RLEKLEVLVLSGCSKLRTFPEIEEKMNRLAELY 726

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPS 235
               +     AS        ++  S C     LP S+  +  L  LD+S C      +P 
Sbjct: 727 LGATSLSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS-KLKNLPD 785

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           D+  L  +++L+       T+P+S+S L NL+ L L  C  L
Sbjct: 786 DLGLLVGIEKLHCTHTAIQTIPSSMSLLKNLKHLSLSGCNAL 827



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 11/112 (9%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++         T + EL  ++E   G+  + L+ CK+LE LP 
Sbjct: 706 CSKL----RTFPEIEEKMNRLAELYLGATSLSELPASVENFSGVGVINLSYCKHLESLPS 761

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
           +I  LK L TL++SG SK +  P+       + ++H   TAI+ +P+S+ LL
Sbjct: 762 SIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGIEKLHCTHTAIQTIPSSMSLL 813



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L L   + ++ L +T   L  L  +NLS   K    P+ + + +    +  E T++ 
Sbjct: 605 LVSLKLKKSRIIQ-LWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLV 663

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +  SI  L   +L NLK+C+NLK++P  I  L  L ++  SGCSKL+   E   K+  L
Sbjct: 664 EINFSIGDLGKLVLLNLKNCRNLKTIPKRIR-LEKLEVLVLSGCSKLRTFPEIEEKMNRL 722


>gi|359495285|ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 203/558 (36%), Positives = 287/558 (51%), Gaps = 76/558 (13%)

Query: 2    ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             S  +L  L LDG +S+ EV  SI  L  L LL LK CK L   P +I  +K L  L  S
Sbjct: 863  VSAPNLEKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFP-SIIDMKALEILNFS 921

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            GCS LKKFP I  +ME+L +LYL  T+I E+PSSI  L GL LL L  CKNL  LP+SI 
Sbjct: 922  GCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSIC 981

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             LKSL+ L+LSGC +LE+ P+    +++L+EL + GT I    SSI  +K L  L    C
Sbjct: 982  KLKSLENLSLSGCSQLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKC 1041

Query: 181  NEPPASASWHLHLPFNLLGKS---SCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSD 236
                           NLL  S   S  + L LP S +   SL+ LD+SDC L E AIP+ 
Sbjct: 1042 K--------------NLLSLSNGISNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNG 1087

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            I +L SLK+L L+RNNF+++PA IS L NL++L L  C+ L  +P++PP+++ + A+ C+
Sbjct: 1088 ICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLAQCQSLTGIPELPPSVRDIDAHNCT 1147

Query: 297  SLVTLFGALKLCRS-KYTIINCI----DSLKLLRKNGLAI-------------------S 332
            SL+    ++   +  ++   NC     D     ++  L I                    
Sbjct: 1148 SLLPGSSSVSTLQGLQFLFYNCSKPVEDQSSDDKRTELQIFPHIYVSSTASDSSVTTSPV 1207

Query: 333  MLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAIC 392
            M+++ LE  A        SIVFPG+ IP+W  +QN GSSI +  P+  Y+ +  +GFA+C
Sbjct: 1208 MMQKLLENIA-------FSIVFPGTGIPEWIWHQNVGSSIKIQLPTNWYS-DDFLGFALC 1259

Query: 393  CVFQVPKHSTGTYLFHSYPAHELECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLFLP 448
             V +   H     + H      L   +   G+    GH  ++ G    V S+H+WL + P
Sbjct: 1260 SVLE---HLPERIICH------LNSDVFNYGDLKDFGHDFHWTGNI--VGSEHVWLGYQP 1308

Query: 449  -RHGHNWQF----ESNLIRLSF----RSISDPTWKVKRCGFHPIYMHEVEEFDETTKQST 499
                  +QF    E N I +SF    R  S  +  VK+CG   IY  ++E      ++  
Sbjct: 1309 CSQLRLFQFNDPNEWNHIEISFEAAHRFNSSASNVVKKCGVCLIYAEDLEGIHPQNRKQL 1368

Query: 500  RFTSCNLNEVHHDFVGSN 517
            +   CN+ E   D  G N
Sbjct: 1369 KSRGCNVVERSSDRAGLN 1386



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 79/132 (59%), Gaps = 7/132 (5%)

Query: 656  EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
            +FP+I       +++    T I EL  +I  L GLV L L  CKNL+ LP +I  LK L 
Sbjct: 928  KFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLE 987

Query: 709  TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
             L+LSG S+   FPE+T + D L E+ L+GT I  LP+SIE L G +L NL+ CKNL SL
Sbjct: 988  NLSLSGCSQLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLVLLNLRKCKNLLSL 1047

Query: 769  PSTINGLRSLRM 780
             + I+    LR+
Sbjct: 1048 SNGISNGIGLRL 1059



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 2/147 (1%)

Query: 658  PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P++ +++ DG + + E+  +I  L  L+ L L  CK L   P  I  +K L  LN SG S
Sbjct: 866  PNLEKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIID-MKALEILNFSGCS 924

Query: 717  KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
              ++FP I  + + LLE++L  TAI  LP+SI  L+G +L +LK CKNLKSLP++I  L+
Sbjct: 925  GLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLK 984

Query: 777  SLRMMYPSGCSKLKNVTETLGKVESLE 803
            SL  +  SGCS+L++  E    +++L+
Sbjct: 985  SLENLSLSGCSQLESFPEVTENMDNLK 1011


>gi|356560337|ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 180/499 (36%), Positives = 267/499 (53%), Gaps = 29/499 (5%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G TS+TEV  S+     L ++ LK CK L +LP  +  +  L+ L LSGCS+
Sbjct: 649  NLESLVLEGCTSLTEVHPSLVRHKKLAMMNLKDCKRLKTLPSKME-MSSLKDLNLSGCSE 707

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
             K  P+   SME LS L L+GT+IA++PSS+  L GL  LYL  CKNLV LP + + L S
Sbjct: 708  FKYLPEFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNS 767

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L  LN+SGC KL  +P+ L +++SLEELD SGTAI+   SS+F ++NL+S+ F+GC +P 
Sbjct: 768  LIVLNVSGCSKLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGCKKPV 827

Query: 185  ASASWHLHLPFN-LLGKSSCPVALML-PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            +++     LPF  + G    P A  L PS   + SL +++LS C L E + P    +L S
Sbjct: 828  SNSVSGFLLPFQWVFGNQQTPTAFRLPPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSS 887

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            L+ L L  NNFVTLP+ IS L  LE L L  CK+L+ LP++P  ++ + A+ C+SL T  
Sbjct: 888  LQFLDLTGNNFVTLPSCISNLTKLEILLLNLCKKLKRLPELPSRMKHLDASNCTSLET-- 945

Query: 303  GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLE-LQAVSDPGHKLSIVFPGSQIPK 361
                   SK+   N      L   +       RE +  L+ +  P  +  ++ PGS+IP 
Sbjct: 946  -------SKF---NPSKPCSLFASSPSNFHFSRELIRYLEELPLPRTRFEMLIPGSEIPS 995

Query: 362  WFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDG 421
            WF+ Q   S   +  P +   VN+ VGFA+C  F +  ++      H    HE+EC + G
Sbjct: 996  WFVPQKCVSLAKIPVP-HNCPVNEWVGFALC--FLLVSYANPPEACH----HEVECYLFG 1048

Query: 422  SGEGHYIYFRG-KFGHVVSDHLWLLFLPRHGHNWQFESNL----IRLSFRSISDPTWKVK 476
                  I  R      +   HL++L+L    +       +    I    +S    + ++ 
Sbjct: 1049 PNGKTIISSRNLPPMELDCPHLYILYLSIDKYRDMICEGVVGSEIEFVLKSYCCQSLEIV 1108

Query: 477  RCGFHPIYMHEVEEFDETT 495
            RCG   +   +VE+  E +
Sbjct: 1109 RCGCRLVCKQDVEDIYENS 1127



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 92/179 (51%), Gaps = 25/179 (13%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           SM+ LS L L+GT+I ++PSS+  L GL  L LK CKNL  LP T  +L  L  L +SGC
Sbjct: 717 SMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLNVSGC 776

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV--------- 113
           SKL   P+ +  ++ L +L   GT+I E+PSS+  L  L+ +    CK  V         
Sbjct: 777 SKLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGCKKPVSNSVSGFLL 836

Query: 114 ---------------RLPSSINGLKSLKTLNLSGC-CKLENVPDTLGKVESLEELDVSG 156
                          RLP S   L SL  +NLS C    E+ PD    + SL+ LD++G
Sbjct: 837 PFQWVFGNQQTPTAFRLPPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSSLQFLDLTG 895



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL   T + E+  ++     L  + L  CK L+ LP  +  +  L  LNLSG S+F+  P
Sbjct: 654 VLEGCTSLTEVHPSLVRHKKLAMMNLKDCKRLKTLPSKME-MSSLKDLNLSGCSEFKYLP 712

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           E   S + L  + LEGTAI  LP+S+  L G     LK+CKNL  LP T + L SL ++ 
Sbjct: 713 EFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLN 772

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKL  + E L +++SLE
Sbjct: 773 VSGCSKLGCLPEGLKEIKSLE 793



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 2/97 (2%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G TS+TEV  S+       ++ L+ CK L +LP  +  +  L+ L LSGCS+
Sbjct: 1190 NLESLVLEGCTSLTEVHPSLVRHKKPVMMNLEDCKRLKTLPSKME-MSSLKYLSLSGCSE 1248

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL 101
             +  P+   SME +S L L+ T I ++PSS+  L GL
Sbjct: 1249 FEYLPEFGESMEQMSVLNLEETPITKLPSSLGCLVGL 1285



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 6/124 (4%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EF + ++ LS    +GT I +L  ++  L GL  L L  CKNL  LP T   L  L  LN
Sbjct: 713 EFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLN 772

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           +SG SK    PE       L E+   GTAI+ LP+S+  L      +   CK  K + ++
Sbjct: 773 VSGCSKLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGCK--KPVSNS 830

Query: 772 INGL 775
           ++G 
Sbjct: 831 VSGF 834



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 50/203 (24%)

Query: 99  PGLELLY------------------------LNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           P LE L                         L +CK L  LPS +  + SLK LNLSGC 
Sbjct: 648 PNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLKDCKRLKTLPSKME-MSSLKDLNLSGCS 706

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           + + +P+    +E L  L + GTAI +  SS+  +  L  LY   C              
Sbjct: 707 EFKYLPEFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKN------------ 754

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRNNF 253
                     +  +  +   + SL  L++S C  LG   +P  +  + SL+EL  +    
Sbjct: 755 ----------LVCLPDTFHNLNSLIVLNVSGCSKLG--CLPEGLKEIKSLEELDASGTAI 802

Query: 254 VTLPASISGLLNLEELELEDCKR 276
             LP+S+  L NL+ +    CK+
Sbjct: 803 QELPSSVFYLENLKSISFAGCKK 825



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%)

Query: 48   ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYL 106
            I  L+ L++++LS    LK+ P    +  +L  L L+G TS+ EV  S+       ++ L
Sbjct: 1162 IKLLEKLKSIDLSFSKNLKQSPDFDGA-PNLESLVLEGCTSLTEVHPSLVRHKKPVMMNL 1220

Query: 107  NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
             +CK L  LPS +  + SLK L+LSGC + E +P+    +E +  L++  T I +  SS+
Sbjct: 1221 EDCKRLKTLPSKME-MSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSL 1279



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 5/72 (6%)

Query: 684  VQLTLNGCKNLERLPRTI--SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
            V + L  CK L+ LP  +  S+LKYLS   LSG S+F   PE   S +Q+  ++LE T I
Sbjct: 1216 VMMNLEDCKRLKTLPSKMEMSSLKYLS---LSGCSEFEYLPEFGESMEQMSVLNLEETPI 1272

Query: 742  RGLPASIELLSG 753
              LP+S+  L G
Sbjct: 1273 TKLPSSLGCLVG 1284



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 20/194 (10%)

Query: 623 GCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTD-IRELSL------ 675
           G     ++ GR  V ++SP +PG  SRLW + D   D V   + GTD I+ + L      
Sbjct: 487 GMHDLLQEMGRNIVFQESPNDPGKRSRLWSQKD--IDYVLTKNKGTDEIQGIVLNLVQPC 544

Query: 676 ------AIELLFGLVQLTLNGCKNLERLPRTISAL-KYLSTLNLSGLSKFREFPEITSSR 728
                 + E      QL L    +++ LPR ++ L   L  L+  G    +  P + +  
Sbjct: 545 DYEGRWSTEAFSKTSQLKLLMLCDMQ-LPRGLNCLPSSLKVLHWRG-CPLKTLP-LNNKL 601

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D+++++ L  + I  L    +LL      NL   KNLK  P    G  +L  +   GC+ 
Sbjct: 602 DEVVDLKLPHSRIEQLWRGTKLLEKLKSINLSFSKNLKQSPD-FGGAPNLESLVLEGCTS 660

Query: 789 LKNVTETLGKVESL 802
           L  V  +L + + L
Sbjct: 661 LTEVHPSLVRHKKL 674



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 699  RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
            + I  L+ L +++LS     ++ P+   + + L  + LEG T++  +  S+      ++ 
Sbjct: 1160 QDIKLLEKLKSIDLSFSKNLKQSPDFDGAPN-LESLVLEGCTSLTEVHPSLVRHKKPVMM 1218

Query: 758  NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            NL+DCK LK+LPS +  + SL+ +  SGCS+ + + E    +E + V
Sbjct: 1219 NLEDCKRLKTLPSKME-MSSLKYLSLSGCSEFEYLPEFGESMEQMSV 1264


>gi|37781226|gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 157/384 (40%), Positives = 233/384 (60%), Gaps = 16/384 (4%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 660  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 718

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 719  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 778

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 779  KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSH-- 836

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                G+ S  V     +L+G+CSL  LDLSDC + +  I +++  L SL+ L LN NNF 
Sbjct: 837  ----GQKSMGVNFQ--NLSGLCSLIMLDLSDCNISDGGILNNLGFLSSLEILILNGNNFS 890

Query: 255  TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL-CRSKY 312
             +P ASIS    L+ L+L  C RL+SLP++PP+++ + AN C+SL+++    K    S  
Sbjct: 891  NIPAASISRFTRLKRLKLHGCGRLESLPELPPSIKGIFANECTSLMSIDQLTKYPMLSDA 950

Query: 313  TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGS-S 371
            T  NC   +K  +   +  S+L++ LE   ++    +  +  PG +IP+WF Y++ G+ S
Sbjct: 951  TFRNCRQLVKNKQHTSMVDSLLKQMLEALYMNV---RFCLYVPGMEIPEWFTYKSWGTQS 1007

Query: 372  ITVTRPSYLYNVNKVVGFAICCVF 395
            ++V  P+  +      GF +C + 
Sbjct: 1008 MSVALPTNWFTPT-FRGFTVCVIL 1030



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 655 VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 713

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 714 EIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 773

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 774 VSGCSKLKNLPD 785



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 32/213 (15%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++         T + EL  ++E L G+  + L+ CK+LE LP 
Sbjct: 706 CSKL----RTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPS 761

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL++SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L
Sbjct: 762 SIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSL 821

Query: 760 KDCKNL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEV 804
             C  L           KS+      ++GL SL M+  S C+     +   LG + SLE+
Sbjct: 822 SGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILNNLGFLSSLEI 881

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
            + +       N+F  +  +++   T+L + +L
Sbjct: 882 LILN------GNNFSNIPAASISRFTRLKRLKL 908



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 11/222 (4%)

Query: 64  KLKK--FPQIVASMEDLSKL-YLD---GTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
           KLKK    Q+  + +DL KL Y++      +   P    + P LE L L EC +LV +  
Sbjct: 609 KLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRTPD-FSVTPNLERLVLEECTSLVEINF 667

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN-LRSLY 176
           SI  L  L  LNL  C  L+ +P  + ++E LE L ++G +  R    I    N L  LY
Sbjct: 668 SIENLGKLVLLNLKNCRNLKTLPKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELY 726

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPS 235
               +     AS        ++  S C     LP S+  +  L  LD+S C      +P 
Sbjct: 727 LGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS-KLKNLPD 785

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           D+  L  L+EL+       T+P+S+S L NL+ L L  C  L
Sbjct: 786 DLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNAL 827



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 59/227 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRE-LSLAI----ELLFG---L 683
           G   VRR++  +P  CSR+W+  D  P + + L  GTD  E +SL +    E+ FG    
Sbjct: 499 GWHIVRREATDDPRMCSRMWKREDICPVLERNL--GTDKNEGMSLHLTNEEEVNFGGKAF 556

Query: 684 VQLT---------LNGCKNLERLP------------------------------------ 698
           +Q+T            C+  E LP                                    
Sbjct: 557 MQMTRLRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKGDQLVGLKLKKSRII 616

Query: 699 ---RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
              +T   L  L  +NLS   K    P+ + + +    +  E T++  +  SIE L   +
Sbjct: 617 QLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGKLV 676

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L NLK+C+NLK+LP  I  L  L ++  +GCSKL+   E   K+  L
Sbjct: 677 LLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEKMNCL 722


>gi|224102677|ref|XP_002334150.1| predicted protein [Populus trichocarpa]
 gi|222869839|gb|EEF06970.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/382 (41%), Positives = 211/382 (55%), Gaps = 51/382 (13%)

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS 165
           +N CKNL  +PSSI  LKSLK L+LSGC +L+N+P  LGKV+SLEE DVSGT+IR+  +S
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPAS 60

Query: 166 IFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD 225
           +FL+KNL+ L   G               F  L         +LPSL+G+CSL  L L  
Sbjct: 61  LFLLKNLKVLSLDG---------------FKRLA--------VLPSLSGLCSLEVLGLRA 97

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
           C L E A+P DI  L SL  L L+RNNFV+LP SI+ L  LE+L LEDC  L+SLP++P 
Sbjct: 98  CNLREGALPEDIGCLSSLTSLDLSRNNFVSLPRSINMLYELEKLVLEDCTMLESLPEVPS 157

Query: 286 NLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQA 342
            +Q V  NGC SL T+   +KL  SK +   C++  +L   NG   + ++ML  Y  L+ 
Sbjct: 158 KVQTVYLNGCISLKTIPDPIKLSSSKISEFICLNCWELYNHNGQDSMGLTMLERY--LKG 215

Query: 343 VSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHST 402
           +S+P     I  PG++IP WF +Q +GSSI+V  PS        +GF  C  F     S 
Sbjct: 216 LSNPRPGFGIAVPGNEIPGWFNHQRKGSSISVQVPSC------GMGFVACVAFSANGESP 269

Query: 403 GTYLFHSYPAHELECSMDGSGEGHY---IYFRGKFGHVVSDHLWLLFLP-RHGHNWQFES 458
             +           C    +G  +Y   +        V+SDH+WL +L   H   W+ ES
Sbjct: 270 SLF-----------CHFKANGRENYPSPMCISCNSIQVLSDHIWLFYLSFDHLKEWKHES 318

Query: 459 -NLIRLSFRSISDPTWKVKRCG 479
            + I LSF S S+   KVK CG
Sbjct: 319 FSNIELSFHS-SEQRVKVKNCG 339



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 2/111 (1%)

Query: 35  LKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSS 94
           +  CKNL S+P +I  LK L+ L+LSGCS+L+  PQ +  ++ L +  + GTSI ++P+S
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPAS 60

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLG 144
           + LL  L++L L+  K L  LP S++GL SL+ L L  C   E  +P+ +G
Sbjct: 61  LFLLKNLKVLSLDGFKRLAVLP-SLSGLCSLEVLGLRACNLREGALPEDIG 110



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 1/100 (1%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
           +N CKNLE +P +I  LK L  L+LSG S+ +  P+       L E  + GT+IR LPAS
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTSIRQLPAS 60

Query: 748 IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
           + LL    + +L   K L  LPS ++GL SL ++    C+
Sbjct: 61  LFLLKNLKVLSLDGFKRLAVLPS-LSGLCSLEVLGLRACN 99



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 5/144 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L +  + GTSI ++P+S+ LL  L++L+L G K L+ LP ++S L  L  L L 
Sbjct: 38  LGKVKSLEEFDVSGTSIRQLPASLFLLKNLKVLSLDGFKRLAVLP-SLSGLCSLEVLGLR 96

Query: 61  GCS-KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+ +    P+ +  +  L+ L L   +   +P SI +L  LE L L +C  L  LP   
Sbjct: 97  ACNLREGALPEDIGCLSSLTSLDLSRNNFVSLPRSINMLYELEKLVLEDCTMLESLPEVP 156

Query: 120 NGLKSLKTLNLSGCCKLENVPDTL 143
           +    ++T+ L+GC  L+ +PD +
Sbjct: 157 S---KVQTVYLNGCISLKTIPDPI 177



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 25/158 (15%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++  +PSSI  L  L+ L L GC  L ++P  +  +K L   ++SG S +++ P  +  +
Sbjct: 6   NLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLEEFDVSGTS-IRQLPASLFLL 64

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC------------------------KN 111
           ++L  L LDG     V  S+  L  LE+L L  C                         N
Sbjct: 65  KNLKVLSLDGFKRLAVLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSLTSLDLSRNN 124

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            V LP SIN L  L+ L L  C  LE++P+   KV+++
Sbjct: 125 FVSLPRSINMLYELEKLVLEDCTMLESLPEVPSKVQTV 162



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 37/45 (82%)

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           + +CKNL+S+PS+I  L+SL+ +  SGCS+L+N+ + LGKV+SLE
Sbjct: 1   MNNCKNLESIPSSICCLKSLKKLDLSGCSELQNIPQNLGKVKSLE 45



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE--FPEI 724
           GT IR+L  ++ LL  L  L+L+G K L  LP ++S L  L  L L   +  RE   PE 
Sbjct: 51  GTSIRQLPASLFLLKNLKVLSLDGFKRLAVLP-SLSGLCSLEVLGLRACN-LREGALPED 108

Query: 725 TSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
                 L  + L       LP SI +L       L+DC  L+SLP   + +++   +Y +
Sbjct: 109 IGCLSSLTSLDLSRNNFVSLPRSINMLYELEKLVLEDCTMLESLPEVPSKVQT---VYLN 165

Query: 785 GCSKLKNVTETL 796
           GC  LK + + +
Sbjct: 166 GCISLKTIPDPI 177


>gi|147768286|emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 182/502 (36%), Positives = 269/502 (53%), Gaps = 41/502 (8%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G  S+ +V  SI  L  L  L L GCKNL S   +I  +  L+ L LSGCSK
Sbjct: 693  NLERLILEGCKSMVKVHPSIGALQKLIFLNLXGCKNLKSFASSIH-MNSLQILTLSGCSK 751

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            LKKFP+++ +M+ L +L LD T++ E+PSSI  L GL LL L  CK LV LP S+  L S
Sbjct: 752  LKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTS 811

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L+ L L+GC +L+ +PD LG +  L  L+  G+ I+    SI L+ NL+ L  +GC +  
Sbjct: 812  LQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKR- 870

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                   ++ F+L   SS  V L L SL  + S+  L LSDC L E A+PSD+ +L SL+
Sbjct: 871  -------NVVFSLW--SSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSLE 921

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
             L L++NNF+T+PAS++ L  L  L L  CK LQS+P++P  +Q V A+ C SL T   +
Sbjct: 922  SLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETF--S 979

Query: 305  LKLCRSK------YTIINCI--------DSLKLLRKNGLAISMLREYLELQAVSD-PGHK 349
            L  C S+      +T  +C         D++  + +     S + ++++    S  P + 
Sbjct: 980  LSACASRKLNQLNFTFSDCFRLVENEHSDTVGAILQGIQLASSIPKFVDANKGSPVPYND 1039

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF-- 407
              ++ PGS IP+WF++QN GSS+TV  P + YN  K++G A+C VF       G   +  
Sbjct: 1040 FHVIVPGSSIPEWFIHQNMGSSVTVELPPHWYNA-KLMGLAVCAVFHADPIDWGYLQYSL 1098

Query: 408  ----HSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHG-HNWQFESNLIR 462
                H Y ++ L+      G+  +  ++   G    D +W  F  R G     F  + I+
Sbjct: 1099 YRGEHKYDSYMLQTWSPMKGDHVWFGYQSLVG-XEDDRMW--FGERSGTXKILFSGHCIK 1155

Query: 463  LSFRSISDPTWKVKRCGFHPIY 484
                 +  P   VK+CG    Y
Sbjct: 1156 SCJVCVQ-PEVVVKKCGVRLAY 1176



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 86/146 (58%), Gaps = 14/146 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +MK L  L LD T++ E+PSSI  L GL LL L  CK L SLP ++  L  L+ L L+
Sbjct: 759 LENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLA 818

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--NLV----- 113
           GCS+LKK P  + S+  L  L  DG+ I EVP SI LL  L++L L  CK  N+V     
Sbjct: 819 GCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWS 878

Query: 114 ------RLPSSINGLKSLKTLNLSGC 133
                 +L S +N L S+KTL+LS C
Sbjct: 879 SPTVCLQLRSLLN-LSSVKTLSLSDC 903



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 79/127 (62%), Gaps = 1/127 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L+ L L GCKNL+    +I  +  L  L LSG SK ++FPE+  +   L ++ 
Sbjct: 711 SIGALQKLIFLNLXGCKNLKSFASSIH-MNSLQILTLSGCSKLKKFPEMLENMKSLRQLL 769

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L+ TA+R LP+SI  L+G +L NL +CK L SLP ++  L SL+++  +GCS+LK + + 
Sbjct: 770 LDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDE 829

Query: 796 LGKVESL 802
           LG +  L
Sbjct: 830 LGSLRCL 836



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 17/145 (11%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP+++       Q+L D T +REL  +I  L GLV L L  CK L  LP+
Sbjct: 749 CSKL----KKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQ 804

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           ++  L  L  L L+G S+ ++ P+   S   L+ ++ +G+ I+ +P SI LL+   + +L
Sbjct: 805 SLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSL 864

Query: 760 KDCK------NLKSLPSTINGLRSL 778
             CK      +L S P+    LRSL
Sbjct: 865 AGCKKRNVVFSLWSSPTVCLQLRSL 889


>gi|224116230|ref|XP_002331993.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832117|gb|EEE70594.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1308

 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 158/419 (37%), Positives = 218/419 (52%), Gaps = 91/419 (21%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L    L
Sbjct: 647 LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNLE-MESLNVFTL 705

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M +L  L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 706 DGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSI 765

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+ +P+ LG+VESL+E D SGT+IR+  +SIF++KNL+ L   G
Sbjct: 766 GCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDG 825

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C                          ++LPSL+G+CSL  L L  C L E A+P DI  
Sbjct: 826 CKR-----------------------IVVLPSLSGLCSLEVLGLRACNLREGALPEDIGC 862

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SLK L L++NNFV+LP SI+ L  LE L LEDC  L+SLP++P  +Q           
Sbjct: 863 LSSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQ----------- 911

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
                                                      +S+P    SI  PG++I
Sbjct: 912 -----------------------------------------TGLSNPRPGFSIAVPGNEI 930

Query: 360 PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP-----KHSTGTYL---FHSY 410
             WF +Q+EGSSI+V  PS+       +GF  C  F        KH++ + +   FHSY
Sbjct: 931 LGWFNHQSEGSSISVQVPSW------SMGFVACVAFSANELKEWKHASFSNIELSFHSY 983



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 12/148 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I +LS +I  L GL  L++N CKNLE +P 
Sbjct: 708 CSKL----EKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPS 763

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E    GT+IR LPASI +L    + +L
Sbjct: 764 SIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSL 823

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             CK +  LPS ++GL SL ++    C+
Sbjct: 824 DGCKRIVVLPS-LSGLCSLEVLGLRACN 850



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 76/121 (62%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L+   L G SK  +FP+I  + ++L+ + L+ T I 
Sbjct: 677 LQYVNLVNCKSIRILPNNLE-MESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGIT 735

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  L G  L ++  CKNL+S+PS+I  L+SL+ +  SGCS+LK + E LG+VESL
Sbjct: 736 KLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESL 795

Query: 803 E 803
           +
Sbjct: 796 D 796



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR + P+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 501 GKEIVRCEDPKEPGKRSRLW----TYKDVFLALMDNTGKEK----IEAIF----LDMPGI 548

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S+                     D+L
Sbjct: 549 KEAQWNMKAFSKMSRLRLLKIDNV-QLSEGPEDLSNELRFIEWHSYPSKSLPSGLQVDEL 607

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  +++  L    +      + NL +   L   P  + G+ +L  +   GC+ L  
Sbjct: 608 VELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPD-LTGIPNLESLILEGCTSLSE 666

Query: 792 VTETLGKVESLE 803
           V  +L   + L+
Sbjct: 667 VHPSLAHHKKLQ 678


>gi|357504435|ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
 gi|355497521|gb|AES78724.1| TMV resistance protein N [Medicago truncatula]
          Length = 1137

 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 170/500 (34%), Positives = 258/500 (51%), Gaps = 29/500 (5%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G TS+TE+  S+     L LL LK CK L +LP  I  +  L+ L L
Sbjct: 651  FVGVPNLEFLVLEGCTSLTEIHPSLLSHKKLALLNLKDCKRLKTLPCKIE-MSSLKGLSL 709

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGC + K  P+   +ME+LSKL L+ T+I ++PSS+  L  L  L L  CKNLV LP+++
Sbjct: 710  SGCCEFKHLPEFDETMENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTV 769

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            + LKSL  LN+SGC KL + P+ L +++SLEEL  + T+I    SS+F ++NL+ + F+G
Sbjct: 770  SELKSLLILNVSGCSKLHSFPEGLKEMKSLEELFANETSIEELPSSVFFLENLKVISFAG 829

Query: 180  CNEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
            C  P   +     LPF   LG    P    LP    + SL  L+LS C L E ++P D  
Sbjct: 830  CKGPVTKSVNTFLLPFTQFLGTPQEPNGFRLPPKLCLPSLRNLNLSYCNLSEESMPKDFS 889

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            NL SL  L L+ NNFV  P+SIS L  LE L L  C+ LQ  P+ P +++ + A+ C+SL
Sbjct: 890  NLSSLVVLNLSGNNFVRPPSSISKLPKLEYLRLNCCEMLQKFPEFPSSMRLLDASNCASL 949

Query: 299  VTLFGALKLCRSKYTIIN-CIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
             T         SK+ +   C      ++++     +L+ Y+E Q    P  +  ++  GS
Sbjct: 950  ET---------SKFNLSRPCSLFASQIQRHSHLPRLLKSYVEAQEHGLPKARFDMLITGS 1000

Query: 358  QIPKWFMYQNEGSSITVTRPSYLYNV--NKVVGFAICCVFQVPKHSTGTYLFHSYPAHEL 415
            +IP WF        ++VT  S  +N    + +GFA+C  F +   +    L H    HE+
Sbjct: 1001 EIPSWF---TPSKYVSVTNMSVPHNCPPTEWMGFALC--FMLVSFAEPPELCH----HEV 1051

Query: 416  ECSMDGSGEGHYIYFRG-KFGHVVSDHLWLLFLP----RHGHNWQFESNLIRLSFRSISD 470
             C + G     +I  R          HL++L+L     R   +   + + I    ++   
Sbjct: 1052 SCYLFGPKGKLFIRSRDLPPMEPYVRHLYILYLTIDECRERFDEGGDCSEIEFVLKTYCC 1111

Query: 471  PTWKVKRCGFHPIYMHEVEE 490
               +V RCG   ++  +VE+
Sbjct: 1112 DELQVVRCGCRLVFKQDVED 1131



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L  CK L+ LP  I  +  L  L+LSG  +F+  PE   + + L ++ LE TAI+
Sbjct: 681 LALLNLKDCKRLKTLPCKIE-MSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETAIK 739

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+S+  L   +  +L++CKNL  LP+T++ L+SL ++  SGCSKL +  E L +++SL
Sbjct: 740 KLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEMKSL 799

Query: 803 E 803
           E
Sbjct: 800 E 800



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EF + ++ LS    + T I++L  ++  L  L+ L L  CKNL  LP T+S LK L  LN
Sbjct: 720 EFDETMENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILN 779

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           +SG SK   FPE       L E+    T+I  LP+S+  L    + +   CK
Sbjct: 780 VSGCSKLHSFPEGLKEMKSLEELFANETSIEELPSSVFFLENLKVISFAGCK 831



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 63/278 (22%)

Query: 28  TGLELLTLKGCKNLSSLPVT-----ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLY 82
           + L +L   GC  L +LP+T     I ++K  R       SK+++       +E+L  + 
Sbjct: 587 SSLRVLDWSGCP-LRTLPLTNHLVEIVAIKLYR-------SKIEQLWHGTQFLENLKSIN 638

Query: 83  LDGTSIAEVPSSIELLPGLELLY------------------------LNECKNLVRLPSS 118
           L  +   +       +P LE L                         L +CK L  LP  
Sbjct: 639 LSFSKSLKRSPDFVGVPNLEFLVLEGCTSLTEIHPSLLSHKKLALLNLKDCKRLKTLPCK 698

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  + SLK L+LSGCC+ +++P+    +E+L +L +  TAI++  SS+  + +L SL   
Sbjct: 699 IE-MSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETAIKKLPSSLGFLVSLLSLDLE 757

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDI 237
            C               NL         + LP +++ + SL  L++S C     + P  +
Sbjct: 758 NCK--------------NL---------VCLPNTVSELKSLLILNVSGCS-KLHSFPEGL 793

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             + SL+EL+ N  +   LP+S+  L NL+ +    CK
Sbjct: 794 KEMKSLEELFANETSIEELPSSVFFLENLKVISFAGCK 831



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 95/232 (40%), Gaps = 63/232 (27%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVL--SDGTDI-----------RELSL 675
           ++ GR  V  +SP +PG  SRLW +     D+ QVL  + GTD             E S 
Sbjct: 502 QEMGRNIVFEESPNDPGKRSRLWSQK----DVDQVLRQNKGTDKIQGIAMDLVQPYEASW 557

Query: 676 AIELLFGLVQLT-LNGCK-----NLERLPRTISALKY----LSTLNLS-------GLSKF 718
            IE    + QL  L  C+      L R P ++  L +    L TL L+        +  +
Sbjct: 558 KIEAFSKISQLRLLKLCEIKLPLGLNRFPSSLRVLDWSGCPLRTLPLTNHLVEIVAIKLY 617

Query: 719 REFPEITSSRDQLLE----------------------IHLEGTAIRGLPASIE----LLS 752
           R   E      Q LE                       +LE   + G  +  E    LLS
Sbjct: 618 RSKIEQLWHGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEFLVLEGCTSLTEIHPSLLS 677

Query: 753 GNILS--NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
              L+  NLKDCK LK+LP  I  + SL+ +  SGC + K++ E    +E+L
Sbjct: 678 HKKLALLNLKDCKRLKTLPCKIE-MSSLKGLSLSGCCEFKHLPEFDETMENL 728


>gi|296081111|emb|CBI18305.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/303 (45%), Positives = 193/303 (63%), Gaps = 13/303 (4%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M+ L +LYL  T+I E+PSS+E LTGL LL LK CKNL SLP ++  L+ L  L  SGCS
Sbjct: 1   MEHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCS 60

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           KL+ FP+++  ME+L +L LDGTSI  +PSSI+ L  L LL L  CKNLV LP  +  L 
Sbjct: 61  KLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLT 120

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE- 182
           SL+TL +SGC +L N+P  LG ++ L +    GTAI +P  SI L++NL+ L + GC   
Sbjct: 121 SLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRL 180

Query: 183 PPAS-----ASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSD 236
            P S     + W LH         S  ++L LPS  +   S T LDLSDC L E AIP+ 
Sbjct: 181 APTSLGSLFSFWLLH------RNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNS 234

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           I +L SLK+L L+RN+F++ PA IS L +L++L L   + L  +P++PP+++ +  + C+
Sbjct: 235 ICSLISLKKLDLSRNDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPHNCT 294

Query: 297 SLV 299
           +L+
Sbjct: 295 ALL 297



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 84/135 (62%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I EL  ++E L GLV L L  CKNL+ LP ++  L+ L  L  SG SK   FPE+   
Sbjct: 12  TAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCSKLENFPEMMED 71

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L E+ L+GT+I GLP+SI+ L   +L NL++CKNL SLP  +  L SL  +  SGCS
Sbjct: 72  MENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCS 131

Query: 788 KLKNVTETLGKVESL 802
           +L N+ + LG ++ L
Sbjct: 132 QLNNLPKNLGSLQHL 146



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 31/223 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M++L +L LDGTSI  +PSSI+ L  L LL L+ CKNL SLP  + +L  L TL +S
Sbjct: 69  MEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKGMCTLTSLETLIVS 128

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-------- 112
           GCS+L   P+ + S++ L++ + DGT+I + P SI LL  L++L    CK L        
Sbjct: 129 GCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYPGCKRLAPTSLGSL 188

Query: 113 ---------------VRLPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVS- 155
                          +RLPS  +   S   L+LS C  +E  +P+++  + SL++LD+S 
Sbjct: 189 FSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEGAIPNSICSLISLKKLDLSR 248

Query: 156 GTAIRRPT--SSIFLMKNLRSLYFSGCNE----PPASASWHLH 192
              +  P   S +  +K+LR   +    E    PP+    H H
Sbjct: 249 NDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIHPH 291



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 56/75 (74%)

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           + LLE++L  TAI  LP+S+E L+G +L +LK CKNLKSLP+++  L SL  ++PSGCSK
Sbjct: 2   EHLLELYLASTAIEELPSSVEHLTGLVLLDLKRCKNLKSLPTSVCKLESLEYLFPSGCSK 61

Query: 789 LKNVTETLGKVESLE 803
           L+N  E +  +E+L+
Sbjct: 62  LENFPEMMEDMENLK 76



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 5/145 (3%)

Query: 644 PGNCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P  CS+L    E  ++  ++ ++L DGT I  L  +I+ L  LV L L  CKNL  LP+ 
Sbjct: 56  PSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLVLLNLRNCKNLVSLPKG 115

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
           +  L  L TL +SG S+    P+   S   L + H +GTAI   P SI LL    +    
Sbjct: 116 MCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNLKVLIYP 175

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSG 785
            CK L   P+++  L S  +++ +G
Sbjct: 176 GCKRLA--PTSLGSLFSFWLLHRNG 198


>gi|255582274|ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 253/484 (52%), Gaps = 36/484 (7%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ ++LS    L K P     +  L KL L+G   + E+  SI +L  L LL L +CK L
Sbjct: 446 LKIMKLSHSKNLVKTPDF-RGVPSLEKLVLEGCLELQEIDQSIGILERLALLNLKDCKKL 504

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP SI GLK+LK +NLSGC  L+ + + LG ++SLEELDVSGT +++P SS    KNL
Sbjct: 505 SILPESIYGLKALKIVNLSGCSILDYMLEELGDIKSLEELDVSGTTVKQPFSSFSHFKNL 564

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           + L   GC+E P  A W+ HL   L GK S  + L         SL  LDL +C L E  
Sbjct: 565 KILSLRGCSEQPP-AIWNPHLSL-LPGKGSNAMDLY--------SLMVLDLGNCNLQEET 614

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           IP+D+  L SLKE  L+ NNF++LPAS+  L  LE L L++C+ LQS+  +P +++ + A
Sbjct: 615 IPTDLSCLSSLKEFCLSGNNFISLPASVCRLSKLEHLYLDNCRNLQSMQAVPSSVKLLSA 674

Query: 293 NGCSSLVTLFGALKLC---RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK 349
             CS+L TL   L L      ++   NC   ++    N +   MLR Y  LQ +S+P   
Sbjct: 675 QACSALETLPETLDLSGLQSPRFNFTNCFKLVENQGCNNIGFMMLRNY--LQGLSNPKPG 732

Query: 350 LSIVFPGSQIPKWFMYQNEGS-SITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
             I+ PGS+IP W  +Q+ G  SI++  P  ++  +K +GFA+C V+ + +     ++  
Sbjct: 733 FDIIIPGSEIPDWLSHQSLGDCSISIELPP-VWCDSKWMGFALCAVYVIYQEPALNFI-- 789

Query: 409 SYPAHELECSMDGSGEG--HYI-YFRGKFGHVVSDHLWLLFLPRH---GHNWQF---ESN 459
                +L C +   G    H + Y   +   V SD +WL FL R+   G + Q     S+
Sbjct: 790 ---DMDLTCFIKIKGHTWCHELDYSFAEMELVGSDQVWLFFLSRYEFLGIDCQGVAKTSS 846

Query: 460 LIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNME 519
              + F++     + VK+ G   +Y  +V  F++   Q     + NL   H D    N E
Sbjct: 847 HAEVMFKAHGVGLY-VKKFGVRLVYQQDVLVFNQKMDQICSSRNENLEVRHQD--SDNSE 903

Query: 520 VAQA 523
           V  A
Sbjct: 904 VVGA 907



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 14/188 (7%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L+G   + E+  SI +L  L LL LK CK LS LP +I  LK L+ + LSGCS L
Sbjct: 469 LEKLVLEGCLELQEIDQSIGILERLALLNLKDCKKLSILPESIYGLKALKIVNLSGCSIL 528

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK---------NLVRLP 116
               + +  ++ L +L + GT++ +  SS      L++L L  C          +L  LP
Sbjct: 529 DYMLEELGDIKSLEELDVSGTTVKQPFSSFSHFKNLKILSLRGCSEQPPAIWNPHLSLLP 588

Query: 117 ---SSINGLKSLKTLNLSGC-CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              S+   L SL  L+L  C  + E +P  L  + SL+E  +SG       +S+  +  L
Sbjct: 589 GKGSNAMDLYSLMVLDLGNCNLQEETIPTDLSCLSSLKEFCLSGNNFISLPASVCRLSKL 648

Query: 173 RSLYFSGC 180
             LY   C
Sbjct: 649 EHLYLDNC 656



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 56/230 (24%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEF---------PDIVQVLSDGTDIRELSLAIEL 679
           ++ G + V+++SP+EPG  SRLW   D F          D+  ++ D  +  E+ L  + 
Sbjct: 314 QEMGWKLVQQESPEEPGRRSRLWLYKDIFHVLTKNTGTADVEGMVLDLPEAEEIQLEAQA 373

Query: 680 LFGLVQLTLNGCKN------LERLPRTISALKYLST--LNLSGLSKFREFPEITSSRDQL 731
              L ++ L   +N      LE L   +  LK+      NL    +  E  E+  S  Q+
Sbjct: 374 FRKLKKIRLLKFRNVYFSQSLEYLSNELRYLKWYGYPFRNLPCTFQSNELLELNMSYSQV 433

Query: 732 LEIHLEGTA---------------------IRGLPA-----------------SIELLSG 753
            +I  EGT                       RG+P+                 SI +L  
Sbjct: 434 EQI-WEGTKQFNKLKIMKLSHSKNLVKTPDFRGVPSLEKLVLEGCLELQEIDQSIGILER 492

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             L NLKDCK L  LP +I GL++L+++  SGCS L  + E LG ++SLE
Sbjct: 493 LALLNLKDCKKLSILPESIYGLKALKIVNLSGCSILDYMLEELGDIKSLE 542



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 22/159 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK---------NLSSLPVTISS- 50
           +  +K L +L + GT++ +  SS      L++L+L+GC          +LS LP   S+ 
Sbjct: 535 LGDIKSLEELDVSGTTVKQPFSSFSHFKNLKILSLRGCSEQPPAIWNPHLSLLPGKGSNA 594

Query: 51  --LKCLRTLELSGCS-KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             L  L  L+L  C+ + +  P  ++ +  L +  L G +   +P+S+  L  LE LYL+
Sbjct: 595 MDLYSLMVLDLGNCNLQEETIPTDLSCLSSLKEFCLSGNNFISLPASVCRLSKLEHLYLD 654

Query: 108 ECKNLVRL---PSSINGLKSLKTLNLSGCCKLENVPDTL 143
            C+NL  +   PSS+      K L+   C  LE +P+TL
Sbjct: 655 NCRNLQSMQAVPSSV------KLLSAQACSALETLPETL 687



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL    +++E+  +I +L  L  L L  CK L  LP +I  LK L  +NLSG S      
Sbjct: 473 VLEGCLELQEIDQSIGILERLALLNLKDCKKLSILPESIYGLKALKIVNLSGCSILDYML 532

Query: 723 EITSSRDQLLEIHLEGTAIR 742
           E       L E+ + GT ++
Sbjct: 533 EELGDIKSLEELDVSGTTVK 552


>gi|111146892|gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/423 (36%), Positives = 227/423 (53%), Gaps = 30/423 (7%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L G TS+TEV  S+     L  L  + CK L +LP  +  +  L  L L
Sbjct: 645  FVGVPNLESLVLKGCTSLTEVHPSLVRHKKLVWLNFEDCKKLKTLPRKME-MSSLNDLNL 703

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCS+ K  P+   SME LS L L+GT+I ++P+S+  L GL  L    CKNLV LP +I
Sbjct: 704  SGCSEFKCLPEFAESMEHLSVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTI 763

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            + L+SL  LN+SGC KL ++P+ L +++ LEELD S TAI+   S +F ++NLR +  +G
Sbjct: 764  HKLRSLIVLNVSGCSKLSSLPEGLKEIKCLEELDASETAIQELPSFVFYLENLRDISVAG 823

Query: 180  CNEPPASASWHLHLPFN-LLGKSSCPVALML-PSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
            C  P + +     LPF  L G     +   L PS   + SL +++LS C L E + P D 
Sbjct: 824  CKGPVSKSVNSFFLPFKRLFGNQQTSIGFRLPPSALSLPSLKRINLSYCNLSEESFPGDF 883

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             +L SL  L L  NNFV+LP+ IS L  LE L L  CK+LQ+LP++P N++ + A+ C+S
Sbjct: 884  CSLSSLMILNLTGNNFVSLPSCISKLAKLEHLILNSCKKLQTLPKLPSNMRGLDASNCTS 943

Query: 298  L-VTLFGALKLCR-----SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLS 351
              ++ F   K C      +K+     ++            S+L +  +LQ +  P  +  
Sbjct: 944  FEISKFNPSKPCSLFASPAKWHFPKELE------------SVLEKIQKLQKLHLPKERFG 991

Query: 352  IVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV---FQVP----KHSTGT 404
            ++  GS+IP WF      S   ++ P     +N+ VGFA+C +   + VP     H    
Sbjct: 992  MLLTGSEIPPWFSRSKTVSFAKISVPDDC-PMNEWVGFALCFLLVSYVVPPDVCSHEVDC 1050

Query: 405  YLF 407
            YLF
Sbjct: 1051 YLF 1053



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 82/141 (58%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL   T + E+  ++     LV L    CK L+ LPR +  +  L+ LNLSG S+F+  P
Sbjct: 655 VLKGCTSLTEVHPSLVRHKKLVWLNFEDCKKLKTLPRKME-MSSLNDLNLSGCSEFKCLP 713

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           E   S + L  + LEGTAI  LP S+  L G    + K+CKNL  LP TI+ LRSL ++ 
Sbjct: 714 EFAESMEHLSVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLN 773

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKL ++ E L +++ LE
Sbjct: 774 VSGCSKLSSLPEGLKEIKCLE 794



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 9/110 (8%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EF + ++ LS    +GT I +L  ++  L GL  L    CKNL  LP TI  L+ L  LN
Sbjct: 714 EFAESMEHLSVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLN 773

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
           +SG SK    PE       L E+    TAI+ LP+ +       L NL+D
Sbjct: 774 VSGCSKLSSLPEGLKEIKCLEELDASETAIQELPSFV-----FYLENLRD 818



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 623 GCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTD-IRELSLAI---- 677
           G     ++ GR  V ++SP +PG  SRLW + D   D V   + GTD IR + L +    
Sbjct: 488 GMHDLLQEMGRNIVYQESPNDPGKRSRLWSQKD--IDYVLTKNKGTDEIRGIVLNLVQPY 545

Query: 678 --------ELLFGLVQLTLNGCKNLERLPRTISAL-KYLSTLNLSGLSKFREFPEITSSR 728
                   E    + QL L    +++ LPR ++ L   L  ++  G    +  P +++  
Sbjct: 546 DCEARWNTESFSKISQLRLLKLCDMQ-LPRGLNCLPSALKVVHWRG-CPLKTLP-LSNQL 602

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D+++++ L  + I  L    ELL      NL   KNLK  P  + G+ +L  +   GC+ 
Sbjct: 603 DEVVDLKLPYSKIEQLWHGTELLEKLRFINLSFSKNLKQSPDFV-GVPNLESLVLKGCTS 661

Query: 789 LKNVTETLGKVESL 802
           L  V  +L + + L
Sbjct: 662 LTEVHPSLVRHKKL 675



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 16/280 (5%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELL-TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           S   +S L L      ++P  +  L + L+++  +GC  L +LP++ + L  +  L+L  
Sbjct: 555 SFSKISQLRLLKLCDMQLPRGLNCLPSALKVVHWRGCP-LKTLPLS-NQLDEVVDLKLP- 611

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIA----EVPSSIELLPGLELLYLNECKNLVRLPS 117
                K  Q+    E L KL     S +    + P  + + P LE L L  C +L  +  
Sbjct: 612 ---YSKIEQLWHGTELLEKLRFINLSFSKNLKQSPDFVGV-PNLESLVLKGCTSLTEVHP 667

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLY 176
           S+   K L  LN   C KL+ +P  + ++ SL +L++SG +  +        M++L  L 
Sbjct: 668 SLVRHKKLVWLNFEDCKKLKTLPRKM-EMSSLNDLNLSGCSEFKCLPEFAESMEHLSVLC 726

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPS 235
             G        S    +  + L   +C   + LP ++  + SL  L++S C    +++P 
Sbjct: 727 LEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCS-KLSSLPE 785

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +  +  L+EL  +      LP+ +  L NL ++ +  CK
Sbjct: 786 GLKEIKCLEELDASETAIQELPSFVFYLENLRDISVAGCK 825


>gi|147858727|emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 173/438 (39%), Positives = 247/438 (56%), Gaps = 33/438 (7%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-ASMEDLSKLYLDGTSI 88
            L  + L GC +L  L  +I +LK L  L L GCSKL+KFP++V  ++EDLS + L+GT+I
Sbjct: 683  LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 742

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             E+PSSI  L  L LL L  C+ L  LP SI  L SL+TL LSGC KL+ +PD LG+++ 
Sbjct: 743  RELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 802

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA-L 207
            L EL+V GT I+  TSSI L+ NL +L  +GC    + +        NL+   S P A L
Sbjct: 803  LVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSR-------NLISFRSSPAAPL 855

Query: 208  MLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
             LP L+G+ SL  L+LSDC L E A+PSD+ +L SL+ LYL++N+F+TLPAS+S L  L 
Sbjct: 856  QLPFLSGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLR 915

Query: 268  ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-----FGALKLCRSKYTIINCI---- 318
             L LE CK L+SLP++P +++++ A+ C+SL TL         KL   ++   NC     
Sbjct: 916  SLTLEHCKSLRSLPELPSSIEYLNAHSCTSLETLSCSSSTYTSKLGDLRFNFTNCFRLGE 975

Query: 319  ----DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
                D ++ + +     S + + LE        H    + PGS+IPKWF +Q+ GS + V
Sbjct: 976  NQGSDIVETILEGTQLASSMAKLLEPDERGLLQHGYQALVPGSRIPKWFTHQSVGSKVIV 1035

Query: 375  TRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDG---SGEGHYIYFR 431
              P + YN  K +G A C VF       G     ++P   L C ++G   +   H   + 
Sbjct: 1036 ELPPHWYNT-KWMGLAACVVFNFKGAVDGYR--GTFP---LACFLNGRYATLSDHNSLWT 1089

Query: 432  GKFGHVVSDHLWLLFLPR 449
                 + SDH W  ++ R
Sbjct: 1090 SSI--IESDHTWFAYISR 1105



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 93/154 (60%), Gaps = 16/154 (10%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +++DLS + L+GT+I E+PSSI  L  L LL L+ C+ L+SLP +I  L  L+TL LSG
Sbjct: 727 GNLEDLSGISLEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSG 786

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-------NLVR 114
           CSKLKK P  +  ++ L +L +DGT I EV SSI LL  LE L L  CK       NL+ 
Sbjct: 787 CSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLIS 846

Query: 115 LPSS---------INGLKSLKTLNLSGCCKLENV 139
             SS         ++GL SLK+LNLS C  LE  
Sbjct: 847 FRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGA 880



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/121 (47%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-DQLLEIHLEGTAI 741
           L ++ LNGC +L +L  +I ALK L  LNL G SK  +FPE+     + L  I LEGTAI
Sbjct: 683 LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 742

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           R LP+SI  L+  +L NL++C+ L SLP +I  L SL+ +  SGCSKLK + + LG+++ 
Sbjct: 743 RELPSSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 802

Query: 802 L 802
           L
Sbjct: 803 L 803



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 17/159 (10%)

Query: 647 CSRLWEEADEFPDIVQ--------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           CS+L    ++FP++VQ        +  +GT IREL  +I  L  LV L L  C+ L  LP
Sbjct: 715 CSKL----EKFPEVVQGNLEDLSGISLEGTAIRELPSSIGSLNRLVLLNLRNCEKLASLP 770

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
           ++I  L  L TL LSG SK ++ P+       L+E++++GT I+ + +SI LL+     +
Sbjct: 771 QSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINLLTNLEALS 830

Query: 759 LKDCKNLKSLPSTINGLRS-----LRMMYPSGCSKLKNV 792
           L  CK   S    +   RS     L++ + SG   LK++
Sbjct: 831 LAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSL 869



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 22/157 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L +L +DGT I EV SSI LLT LE L+L GCK   S                 
Sbjct: 797 LGRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQ 856

Query: 44  LPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           LP  +S L  L++L LS C+ L+   P  ++S+  L  LYLD  S   +P+S+  L  L 
Sbjct: 857 LPF-LSGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLR 915

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            L L  CK+L  LP   +   S++ LN   C  LE +
Sbjct: 916 SLTLEHCKSLRSLPELPS---SIEYLNAHSCTSLETL 949


>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
 gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/372 (39%), Positives = 205/372 (55%), Gaps = 30/372 (8%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G  ++ EV +S+ LL  +  +TL+ CKNL SLP  +  +  L+ L L
Sbjct: 689  FTGIPNLEKLDLEGCINLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLE-MNSLKRLIL 747

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            +GC+ ++K P    SM +LS L LD   +AE+P +I  L GL  L L +CKN+  LP + 
Sbjct: 748  TGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTF 807

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            + LKSLK LNLSGC K   +PD L + E+LE L+VS TAIR   SSI  +KNL SL F G
Sbjct: 808  SKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHG 867

Query: 180  CNEPPASASWHLHLPFNLL---GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            C     ++   L LP   +   G    P  L+LPS +G+ SL KLDLS C L + +IP D
Sbjct: 868  CKGLARNSESSL-LPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDD 926

Query: 237  IDNLHSLKELYLNRNNFVTL-PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
            +  L SL  L ++ NNFV L    IS LL LE L L  C+ LQSLP +PPN+ FV  + C
Sbjct: 927  LGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVNTSDC 986

Query: 296  SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP 355
            SSL  L    ++     +                A   L++  +++ +        +V P
Sbjct: 987  SSLKPLSDPQEIWGHLAS---------------FAFDKLQDANQIKTL--------LVGP 1023

Query: 356  GSQIPKWFMYQN 367
            G++IP  F YQN
Sbjct: 1024 GNEIPSTFFYQN 1035



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 1/135 (0%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           ++ E+  ++ LL  +  +TL  CKNL+ LP  +  +  L  L L+G +  R+ P+   S 
Sbjct: 705 NLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLE-MNSLKRLILTGCTSVRKLPDFGESM 763

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
             L  + L+   +  LP +I  L+G     L+DCKN+ SLP T + L+SL+ +  SGCSK
Sbjct: 764 TNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSK 823

Query: 789 LKNVTETLGKVESLE 803
              + + L + E+LE
Sbjct: 824 FSKLPDNLHENEALE 838



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 51/100 (51%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D   + EL   I  L GL  L L  CKN+  LP T S LK L  LNLSG SKF + P+  
Sbjct: 772 DEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNL 831

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
              + L  +++  TAIR +P+SI  L   I      CK L
Sbjct: 832 HENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGL 871


>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 211/387 (54%), Gaps = 31/387 (8%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G  ++ EV +S+ LL  +  +TL+ CKNL SLP  +  +  L+ L L
Sbjct: 506 FTGIPNLEKLDLEGCINLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLE-MNSLKRLIL 564

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           +GC+ ++K P    SM +LS L LD   +AE+P +I  L GL  L L +CKN+  LP + 
Sbjct: 565 TGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTF 624

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           + LKSLK LNLSGC K   +PD L + E+LE L+VS TAIR   SSI  +KNL SL F G
Sbjct: 625 SKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHG 684

Query: 180 CNEPPASASWHLHLPFNLL---GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
           C     ++   L LP   +   G    P  L+LPS +G+ SL KLDLS C L + +IP D
Sbjct: 685 CKGLARNSESSL-LPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDD 743

Query: 237 IDNLHSLKELYLNRNNFVTL-PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
           +  L SL  L ++ NNFV L    IS LL LE L L  C+ LQSLP +PPN+ FV  + C
Sbjct: 744 LGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVNTSDC 803

Query: 296 SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP 355
           SSL  L    ++     +                A   L++  +++ +        +V P
Sbjct: 804 SSLKPLSDPQEIWGHLAS---------------FAFDKLQDANQIKTL--------LVGP 840

Query: 356 GSQIPKWFMYQNE-GSSITVTRPSYLY 381
           G++IP  F YQN     I   + +Y++
Sbjct: 841 GNEIPSTFFYQNYFDRDIQYLKDNYIW 867



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 1/135 (0%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           ++ E+  ++ LL  +  +TL  CKNL+ LP  +  +  L  L L+G +  R+ P+   S 
Sbjct: 522 NLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLE-MNSLKRLILTGCTSVRKLPDFGESM 580

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
             L  + L+   +  LP +I  L+G     L+DCKN+ SLP T + L+SL+ +  SGCSK
Sbjct: 581 TNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSK 640

Query: 789 LKNVTETLGKVESLE 803
              + + L + E+LE
Sbjct: 641 FSKLPDNLHENEALE 655



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 51/100 (51%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D   + EL   I  L GL  L L  CKN+  LP T S LK L  LNLSG SKF + P+  
Sbjct: 589 DEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNL 648

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
              + L  +++  TAIR +P+SI  L   I      CK L
Sbjct: 649 HENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGL 688


>gi|147862986|emb|CAN78790.1| hypothetical protein VITISV_027418 [Vitis vinifera]
          Length = 1617

 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 156/430 (36%), Positives = 230/430 (53%), Gaps = 43/430 (10%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++S   L  L LDG TS+ EV   +  L  L +L +K CK L   P +I+ L+ L+ L L
Sbjct: 1161 LSSAPCLELLILDGCTSLLEVHPPVTKLKRLTILNMKNCKMLHHFP-SITGLESLKVLNL 1219

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKL KFP+I   ME L +L L+GT+I E+P S+  LP L LL +  CKNL  LPS+I
Sbjct: 1220 SGCSKLDKFPEIQGYMECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKNLTILPSNI 1279

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LK L TL LSGC  LE  P+ +  +E L++L + G +I+    SI  +K L+SL    
Sbjct: 1280 YSLKFLGTLVLSGCSGLERFPEIMEVMECLQKLLLDGISIKELPPSIVHLKGLQSLSLRK 1339

Query: 180  CNE----PPASASWH-------------LHLPFN----LLGKSSCPVALMLPSLTGVCSL 218
            C      P +  S                 LP      L  ++S  + L LP L+G+ SL
Sbjct: 1340 CKNLKSLPNSICSLRSLETLIVSGCSKLSKLPEELGRLLHRENSDGIGLQLPYLSGLYSL 1399

Query: 219  TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
              LDLS C L + +I  ++ +L  L+EL L+RNN VT+P  ++ L +L  L +  CKRL+
Sbjct: 1400 KYLDLSGCNLTDRSINDNLGHLRFLEELNLSRNNLVTIPEEVNRLSHLRVLSVNQCKRLR 1459

Query: 279  SLPQIPPNLQFVRANGCSSLVT-----------LFGALKLCRSKYTIINCIDSLKLLRKN 327
             + ++PP+++ + A  C SL +           L  + +L    + + NC     L + N
Sbjct: 1460 EISKLPPSIKLLDAGDCISLESLSVLSPQSPQYLSSSSRLHPVTFKLTNC---FALAQDN 1516

Query: 328  GLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVV 387
               ++ + E L    +  P  + SIV PGS IP+WF + + GSS+T+  P   +N  + +
Sbjct: 1517 ---VATILEKLHQNFL--PEIEYSIVLPGSTIPEWFQHPSIGSSVTIELPRNWHN-EEFL 1570

Query: 388  GFAICCVFQV 397
            GFA CCV  +
Sbjct: 1571 GFAXCCVLSL 1580



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 95/160 (59%), Gaps = 11/160 (6%)

Query: 647  CSRLWEEADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    D+FP+I       V++  +GT I EL  ++  L  LV L +  CKNL  LP 
Sbjct: 1222 CSKL----DKFPEIQGYMECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKNLTILPS 1277

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
             I +LK+L TL LSG S    FPEI    + L ++ L+G +I+ LP SI  L G    +L
Sbjct: 1278 NIYSLKFLGTLVLSGCSGLERFPEIMEVMECLQKLLLDGISIKELPPSIVHLKGLQSLSL 1337

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            + CKNLKSLP++I  LRSL  +  SGCSKL  + E LG++
Sbjct: 1338 RKCKNLKSLPNSICSLRSLETLIVSGCSKLSKLPEELGRL 1377



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 1/141 (0%)

Query: 663  VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
            +L   T + E+   +  L  L  L +  CK L   P +I+ L+ L  LNLSG SK  +FP
Sbjct: 1171 ILDGCTSLLEVHPPVTKLKRLTILNMKNCKMLHHFP-SITGLESLKVLNLSGCSKLDKFP 1229

Query: 723  EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            EI    + L+E++LEGTAI  LP S+  L   +L ++++CKNL  LPS I  L+ L  + 
Sbjct: 1230 EIQGYMECLVELNLEGTAIVELPFSVVFLPRLVLLDMQNCKNLTILPSNIYSLKFLGTLV 1289

Query: 783  PSGCSKLKNVTETLGKVESLE 803
             SGCS L+   E +  +E L+
Sbjct: 1290 LSGCSGLERFPEIMEVMECLQ 1310


>gi|357507435|ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
 gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
 gi|355499021|gb|AES80224.1| TMV resistance protein N [Medicago truncatula]
          Length = 1134

 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 157/421 (37%), Positives = 229/421 (54%), Gaps = 29/421 (6%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L  L L+G   + EV  S+     + L+ LK CK+L SL   +  +  L+ L L
Sbjct: 646  FSGVPNLEKLILEGCEGLIEVHPSLAHHKKVVLVNLKDCKSLKSLSGKLE-MSSLKKLIL 704

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SG SK K  P+    ME+LS L L+GT I ++P S+  L GL  L L +CK+LV LP +I
Sbjct: 705  SGSSKFKFLPEFGEKMENLSMLALEGTDIRKLPLSLGRLVGLTNLNLKDCKSLVCLPDTI 764

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            +GL SL TL++SGC KL  +PD L +++ LEEL  + TAI    SSIF + +L+ L F+G
Sbjct: 765  HGLNSLITLDISGCSKLCRLPDGLKEIKCLEELHANDTAIDELPSSIFYLDSLKVLSFAG 824

Query: 180  CNEPPASASWHLHLPFNLL-GKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDI 237
            C + P++ S +  LPFNL+ G         LP S+ G+ SL  L+LS C L E + P+  
Sbjct: 825  C-QGPSTTSMNWFLPFNLMFGSQPASNGFRLPSSVMGLPSLEYLNLSYCNLSEESFPNYF 883

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             +L SLK L L  NNFV +P+SIS L  L  L L  C++LQ LP++P  +  + A+ C S
Sbjct: 884  HHLSSLKSLDLTGNNFVIIPSSISKLSRLRFLCLNWCQKLQLLPELPLTMTQLNASNCDS 943

Query: 298  LVTL-FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE-YLELQAVSDPGHKLSIVFP 355
            L T+ F   KLC               L  +   +S ++E Y   +    P  +  ++ P
Sbjct: 944  LDTMKFNPAKLCS--------------LFASPRKLSYVQELYKRFEDRCLPTTRFDMLIP 989

Query: 356  GSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-------QVPKHSTGTYLFH 408
            G +IP WF+ Q   S   V  P+  +  ++ VGFA+C +        ++ KH    YLF 
Sbjct: 990  GDEIPSWFVPQRSVSWAKVHIPNN-FPQDEWVGFALCFLLVSYADPPELCKHEIDCYLFA 1048

Query: 409  S 409
            S
Sbjct: 1049 S 1049



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           +V + L  CK+L+ L   +  +  L  L LSG SKF+  PE     + L  + LEGT IR
Sbjct: 676 VVLVNLKDCKSLKSLSGKLE-MSSLKKLILSGSSKFKFLPEFGEKMENLSMLALEGTDIR 734

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP S+  L G    NLKDCK+L  LP TI+GL SL  +  SGCSKL  + + L +++ L
Sbjct: 735 KLPLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLNSLITLDISGCSKLCRLPDGLKEIKCL 794

Query: 803 E 803
           E
Sbjct: 795 E 795



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 82/180 (45%), Gaps = 31/180 (17%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EF + ++ LS    +GTDIR+L L++  L GL  L L  CK+L  LP TI  L  L TL+
Sbjct: 715 EFGEKMENLSMLALEGTDIRKLPLSLGRLVGLTNLNLKDCKSLVCLPDTIHGLNSLITLD 774

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG------------------ 753
           +SG SK    P+       L E+H   TAI  LP+SI  L                    
Sbjct: 775 ISGCSKLCRLPDGLKEIKCLEELHANDTAIDELPSSIFYLDSLKVLSFAGCQGPSTTSMN 834

Query: 754 -----NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS----KLKNVTETLGKVESLEV 804
                N++   +   N   LPS++ GL SL  +  S C+       N    L  ++SL++
Sbjct: 835 WFLPFNLMFGSQPASNGFRLPSSVMGLPSLEYLNLSYCNLSEESFPNYFHHLSSLKSLDL 894



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 40/263 (15%)

Query: 44  LPVTISSL-KCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           LP+ +S L   L+ L   GC  LK  P I   +++L  + L  + I ++   ++ +  ++
Sbjct: 573 LPLGLSCLPSSLKVLHWRGCP-LKTLP-ITTQLDELVDITLSHSKIEQLWQGVKFMEKMK 630

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL------------------- 143
            L L   KNL RLP   +G+ +L+ L L GC  L  V  +L                   
Sbjct: 631 YLNLAFSKNLKRLP-DFSGVPNLEKLILEGCEGLIEVHPSLAHHKKVVLVNLKDCKSLKS 689

Query: 144 --GKVE--SLEELDVSGTAIRRPTSSIFL------MKNLRSLYFSGCNEPPASASWHLHL 193
             GK+E  SL++L +SG++  +     FL      M+NL  L   G +      S    +
Sbjct: 690 LSGKLEMSSLKKLILSGSSKFK-----FLPEFGEKMENLSMLALEGTDIRKLPLSLGRLV 744

Query: 194 PFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
               L    C   + LP ++ G+ SL  LD+S C      +P  +  +  L+EL+ N   
Sbjct: 745 GLTNLNLKDCKSLVCLPDTIHGLNSLITLDISGCS-KLCRLPDGLKEIKCLEELHANDTA 803

Query: 253 FVTLPASISGLLNLEELELEDCK 275
              LP+SI  L +L+ L    C+
Sbjct: 804 IDELPSSIFYLDSLKVLSFAGCQ 826



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 31/202 (15%)

Query: 617 MISVDS-----GCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIR 671
           +I++DS     G     ++ GR  V ++SP +P   SRLW + D   D V   + GT+  
Sbjct: 480 LITLDSVNNKLGMHDLLQEMGRDIVFQESPNDPCRRSRLWSQED--IDRVLTKNKGTEAI 537

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLS---GLS---------KFR 719
             S+ ++LL            N E   +T S LK+LS   +    GLS          +R
Sbjct: 538 N-SIDMKLL-----QPYEAHWNTEAFSKT-SQLKFLSLCEMQLPLGLSCLPSSLKVLHWR 590

Query: 720 EFP----EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
             P     IT+  D+L++I L  + I  L   ++ +      NL   KNLK LP   +G+
Sbjct: 591 GCPLKTLPITTQLDELVDITLSHSKIEQLWQGVKFMEKMKYLNLAFSKNLKRLPD-FSGV 649

Query: 776 RSLRMMYPSGCSKLKNVTETLG 797
            +L  +   GC  L  V  +L 
Sbjct: 650 PNLEKLILEGCEGLIEVHPSLA 671


>gi|408537078|gb|AFU75192.1| nematode resistance-like protein, partial [Solanum tuberosum subsp.
           andigenum]
          Length = 307

 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/288 (45%), Positives = 190/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L+N+PD LG +  LE+L  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 NLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL +LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--IGVNFQNLSGLCSLIRLDLSDCDISDGGILSNLGFLSSLEVLLLDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L L  C+RL+SLP++PP+++ + ANGC+SL+++
Sbjct: 243 NIPAASISRLTRLKGLALRGCRRLESLPELPPSIKNIAANGCTSLMSI 290



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCS LKN+ + LG +  LE
Sbjct: 126 VSGCSNLKNLPDDLGLLVGLE 146



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 107/193 (55%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
            LK  P  +  +  L KL+   T+I  +PSS+ LL  L+ L L  C  L  ++ SS +G 
Sbjct: 131 NLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSLKT--LNLSGCCKL------------ENVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+     NLSG C L              +   LG + SLE L + G      P +SI 
Sbjct: 191 KSIGVNFQNLSGLCSLIRLDLSDCDISDGGILSNLGFLSSLEVLLLDGNNFSNIPAASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  L+ L   GC
Sbjct: 251 RLTRLKGLALRGC 263



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 24/204 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG S  +  P+       L ++H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSNLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL  +  S C      +   LG + SLEV L  
Sbjct: 178 ALSSQVSSSSHGQKSIGVNFQNLSGLCSLIRLDLSDCDISDGGILSNLGFLSSLEVLLLD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSNIPAASISRLTRL 255


>gi|224130518|ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 157/413 (38%), Positives = 227/413 (54%), Gaps = 33/413 (7%)

Query: 48   ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYL 106
            +  LK LR ++L     L K P     + +L KL L+G   + ++  SI +L GL  L L
Sbjct: 622  VRPLKLLRAIDLRHSRNLIKTPDF-RQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNL 680

Query: 107  NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
             +C  L  LP++I  LK+L+ LNL GC KLE +P+ LG V +LEELDV  TAI +  S+ 
Sbjct: 681  KDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTF 740

Query: 167  FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
             L K L+ L F GC + PA  SW+    F  L ++ CP+ LML SL+ + SLTKL+LS+C
Sbjct: 741  GLWKKLKVLSFDGC-KGPAPKSWYSLFSFRSLPRNPCPITLMLSSLSTLYSLTKLNLSNC 799

Query: 227  GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
             L E  +P D+    SL+EL L  NNFV +P+SIS L  L+ L L +CK+LQSLP +P  
Sbjct: 800  NLMEGELPDDMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSR 859

Query: 287  LQFVRANGCSSLVTLFGALKLC-RSKY---TIINCIDSLKLLRKNGLAISMLREYLE-LQ 341
            L+++  +GC+SL TL    + C RSK+     +NC +         + ++ L+ YL  L 
Sbjct: 860  LEYLGVDGCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQGNISMGLTWLKYYLHFLL 919

Query: 342  AVSDPGHKLS---IVFPGSQIPKWFMYQNEGSSITVT-RPSYLYNVNKVVGFAICCVFQ- 396
                 GH  S     FPGS+IP WF +++ G S+T+   P   ++ +K +G A+C  F+ 
Sbjct: 920  ESGHQGHPASWFFTCFPGSEIPSWFHHKSVGHSLTIRLLPYEHWSSSKWMGLAVCAFFEE 979

Query: 397  --------------VPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYF-RGKF 434
                          +    + +Y F  YP    E S   S +  +I+F RGKF
Sbjct: 980  LDCGDSCLITLNFDIKGFKSRSY-FLEYP----EGSTFTSNQVFFIFFPRGKF 1027



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 113/241 (46%), Gaps = 29/241 (12%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G   + ++  SI +L GL  L LK C  L+ LP  I  LK LR L L GC K
Sbjct: 650 NLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFK 709

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+K P+++ ++ +L +L +  T+I ++PS+  L   L++L  + CK     P S   L S
Sbjct: 710 LEKLPEMLGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKGPA--PKSWYSLFS 767

Query: 125 LKT-----------------------LNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIR 160
            ++                       LNLS C  +E  +PD +    SLEELD+ G    
Sbjct: 768 FRSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLIGNNFV 827

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK 220
           R  SSI  +  L+SL    C +  +       L +  LG   C     LP+L   C+ +K
Sbjct: 828 RIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEY--LGVDGCASLGTLPNLFEECARSK 885

Query: 221 L 221
            
Sbjct: 886 F 886



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 12/187 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++ +L +L +  T+IT++PS+  L   L++L+  GCK  +  P +  SL   R+L  +
Sbjct: 717 LGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKGPA--PKSWYSLFSFRSLPRN 774

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSI--AEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            C  +      ++++  L+KL L   ++   E+P  +   P LE L L    N VR+PSS
Sbjct: 775 PCP-ITLMLSSLSTLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLI-GNNFVRIPSS 832

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF---LMKNLRSL 175
           I+ L  LK+L L  C KL+++PD   +   LE L V G A      ++F         SL
Sbjct: 833 ISRLSKLKSLRLGNCKKLQSLPDLPSR---LEYLGVDGCASLGTLPNLFEECARSKFLSL 889

Query: 176 YFSGCNE 182
            F  C+E
Sbjct: 890 IFMNCSE 896



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 65/232 (28%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEF--------PDIVQ--VLSDGTDIRELSLAIELLF 681
           GRQ V+R+S +EPG  +RLW   D           D V+  VL+   ++  L L+ E + 
Sbjct: 498 GRQIVKRESHEEPGKRTRLWLCEDVIHVLLNNTGTDKVEGIVLNSNDEVDGLYLSAESIM 557

Query: 682 GLVQLTLNGCKNL---ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
            + +L +   +N+   + +    + L+YL          F+  P  T   D+L+E+H+  
Sbjct: 558 KMKRLRILKLQNINLSQEIKYLSNELRYLEWCRYP----FKSLPS-TFQPDKLVELHMRH 612

Query: 739 TAIRGL-----------------------------------------------PASIELL 751
           ++I+ L                                                 SI +L
Sbjct: 613 SSIKQLWEGVRPLKLLRAIDLRHSRNLIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGIL 672

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            G +  NLKDC  L  LP+ I  L++LR++   GC KL+ + E LG V +LE
Sbjct: 673 KGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLE 724



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I +L GLV L L  C  L  LP  I  LK L  LNL G  K  + PE+  +   L E+ 
Sbjct: 668 SIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELD 727

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           +  TAI  LP++  L     + +   CK     P +   L S R +  + C
Sbjct: 728 VGRTAITQLPSTFGLWKKLKVLSFDGCKG--PAPKSWYSLFSFRSLPRNPC 776



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M+    L +L L G +   +PSSI  L+ L+ L L  CK L SLP   S L+    L + 
Sbjct: 810 MSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLE---YLGVD 866

Query: 61  GCSKLKKFPQIV---ASMEDLSKLYLDGTSIAEVPSSIEL 97
           GC+ L   P +    A  + LS ++++ + + +   +I +
Sbjct: 867 GCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQGNISM 906


>gi|147821054|emb|CAN77694.1| hypothetical protein VITISV_029044 [Vitis vinifera]
          Length = 1530

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 166/487 (34%), Positives = 242/487 (49%), Gaps = 81/487 (16%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + E+P  IE  + L+ L L+ CK L SLP +I   K L TL  SGCS+L+ FP+I+  
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M    KL LDGT+I E+PSSI+ L GL+ L L  C+NLV LP SI  L SL+TL +  C 
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KL  +P+ LG+++SLE L V               K+L S+                   
Sbjct: 1227 KLNKLPENLGRLQSLEYLYV---------------KDLDSM------------------- 1252

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                   +C     LPSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N F 
Sbjct: 1253 -------NC----QLPSLSGLCSLITLQLINCGLRE--IPSGIWHLSSLQHLSLRGNRFS 1299

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
            ++P  I+ L NL   +L  C+ LQ +P++P +L+++ A+ CSSL  L     L  S  ++
Sbjct: 1300 SIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWS--SL 1357

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSIT 373
              C  S ++ R+    +  ++E+       +   K+ +  PGS  IP W  +Q  GS IT
Sbjct: 1358 FKCFKS-RIQRQKIYTLLSVQEF-------EVNFKVQMFIPGSNGIPGWISHQKNGSKIT 1409

Query: 374  VTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY--FR 431
            +  P Y Y  +  +GFA+C +  VP       L         +C ++ +     +   F 
Sbjct: 1410 MRLPRYWYENDDFLGFALCSL-HVP-------LDIEEENRSFKCKLNFNNRAFLLVDDFW 1461

Query: 432  GK------FGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSIS-----DPTWKVKRCGF 480
             K           S+ +WL++ P+     ++ SN  R    S S     +P  KV+RCGF
Sbjct: 1462 SKRNCERCLHGDESNQVWLIYYPKSKIPKKYHSNEYRTLNTSFSEYFGTEPV-KVERCGF 1520

Query: 481  HPIYMHE 487
            H IY  E
Sbjct: 1521 HFIYAQE 1527



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 189/383 (49%), Gaps = 42/383 (10%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P   E  + L  L   G  +L SLP    + K L  L L G S +K+  +      +L 
Sbjct: 589 LPRDFEFSSKLTYLHWDG-YSLESLPTNFHA-KDLVELILRG-SNIKQLWRGNKLHNELK 645

Query: 80  KLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
            + L+    + E+P     +P LE+L L  C  L  LP  I   K L+TL+  GC KL+ 
Sbjct: 646 VINLNYSVHLTEIPD-FSSVPNLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKR 704

Query: 139 VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLL 198
            P+  G +  L ELD+SGTAI+   SS+F  ++L++L                 L F + 
Sbjct: 705 FPEIKGNMRKLRELDLSGTAIKVLPSSLF--EHLKALEI---------------LSFRMS 747

Query: 199 GK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
            K +  P+ +   S     SL  LDLS C + E  IPSDI +L SLKEL L  N+F ++P
Sbjct: 748 SKLNKIPIDICCLS-----SLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIP 802

Query: 258 ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINC 317
           A+I+ L  L+ L L  C+ LQ +P++P +L+ + A+G +   +    L +    ++++NC
Sbjct: 803 ATINQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSNPTSSRASFLPV----HSLVNC 858

Query: 318 IDSLKLLRKNGLAISMLREYLELQAVSDPGHK-LSIVFPGSQ-IPKWFMYQNEGSSITVT 375
            +S        L  S   E     +VS  G K + IV PGS  +P+W M   +   I   
Sbjct: 859 FNS----EIQDLNCSSRNEVWSENSVSTYGSKGICIVLPGSSGVPEWIM---DDQGIATE 911

Query: 376 RPSYLYNVNKVVGFAICCVFQVP 398
            P      N+ +GFA+CCV+ VP
Sbjct: 912 LPQNWNQNNEFLGFALCCVY-VP 933



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D++EL + IE    L  L L  CK L+ LP +I   K L+TL+ SG S+   FPEI   
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                 ++ L+GTAI+ +P+SI+ L G    NL  C+NL +LP +I  L SLR +    C 
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 788  KLKNVTETLGKVESLE 803
            KL  + E LG+++SLE
Sbjct: 1227 KLNKLPENLGRLQSLE 1242



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 3/156 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M     L LDGT+I E+PSSI+ L GL+ L L  C+NL +LP +I +L  LRTL + 
Sbjct: 1164 LEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVV 1223

Query: 61   GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C KL K P+ +  ++ L  LY+ D  S+     S+  L  L  L L  C  L  +PS I
Sbjct: 1224 SCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINC-GLREIPSGI 1282

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
              L SL+ L+L G  +  ++PD + ++ +L   D+S
Sbjct: 1283 WHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLS 1317



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC  LE LPR I   KYL TL+  G SK + FPEI  +  +L E+ L GTAI+ LP
Sbjct: 670 LTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLP 729

Query: 746 ASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +S+ E L    + + +    L  +P  I  L SL ++  S C    N+ E  G + S   
Sbjct: 730 SSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHC----NIME--GGIPSDIC 783

Query: 805 RLSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELL 838
            LSS     ++ NDF    +S   T+ +L++ ++L
Sbjct: 784 HLSSLKELNLKSNDF----RSIPATINQLSRLQVL 814



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +M+ L +L L GT+I  +PSS+ E L  LE+L+ +    L+ +P+ I  L  L  L+LS
Sbjct: 710 GNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLS 769

Query: 61  GCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+ ++   P  +  +  L +L L       +P++I  L  L++L L+ C+NL  +P   
Sbjct: 770 HCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELP 829

Query: 120 NGLKSL 125
           + L+ L
Sbjct: 830 SSLRLL 835



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 36/193 (18%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I++ +        DGT I+E+  +I+ L GL  L L  C+NL  LP 
Sbjct: 1154 CSQL----ESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPE 1209

Query: 700  TISALKYLSTLNLSGLSKFREFPE---------------ITSSRDQ---------LLEIH 735
            +I  L  L TL +    K  + PE               + S   Q         L+ + 
Sbjct: 1210 SICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQ 1269

Query: 736  LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            L    +R +P+ I  LS     +L+  +   S+P  IN L +L +   S C  L+++ E 
Sbjct: 1270 LINCGLREIPSGIWHLSSLQHLSLRGNR-FSSIPDGINQLYNLIVFDLSHCQMLQHIPEL 1328

Query: 796  LGKVESLEVRLSS 808
               +E L+    S
Sbjct: 1329 PSSLEYLDAHQCS 1341



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++ +  L  L L    + E+PS I  L+ L+ L+L+G +  SS+P  I+ L  L   +LS
Sbjct: 1259 LSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNR-FSSIPDGINQLYNLIVFDLS 1317

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI 95
             C  L+  P++ +S+E L         I   PS++
Sbjct: 1318 HCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTL 1352



 Score = 39.3 bits (90), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 2/114 (1%)

Query: 667 GTDIREL-SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE-FPEI 724
           GT I+ L S   E L  L  L+      L ++P  I  L  L  L+LS  +      P  
Sbjct: 722 GTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSD 781

Query: 725 TSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
                 L E++L+    R +PA+I  LS   + NL  C+NL+ +P   + LR L
Sbjct: 782 ICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLL 835


>gi|105922867|gb|ABF81441.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
 gi|105922933|gb|ABF81445.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1378

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 149/370 (40%), Positives = 201/370 (54%), Gaps = 52/370 (14%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  + +L  L L+G  S++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 706  LTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNLE-MESLKFFTL 764

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             GCSKL+ FP IV +M  L KL LD T IAE+  SI  + GLE+L +N CK L  +  SI
Sbjct: 765  DGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSI 824

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSLK L+LSGC +L+N+P  L KVESLEE DVSGT+IR+  +SIFL+KNL  L   G
Sbjct: 825  ECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDG 884

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                                       L  C L   A+P DI  
Sbjct: 885  -------------------------------------------LRACNL--RALPEDIGC 899

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SLK L L+RNNFV+LP SI+ L  LE+L LEDC  L+SL ++P  +Q V  NGC SL 
Sbjct: 900  LSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLEVPSKVQTVNLNGCISLK 959

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSDPGHKLSIVFPG 356
            T+   +KL  S+ +   C+D  +L   NG   +   ML  Y  LQ +S+P     IV PG
Sbjct: 960  TIPDPIKLSSSQRSEFMCLDCWELYEHNGQDSMGSIMLERY--LQGLSNPRPGFRIVVPG 1017

Query: 357  SQIPKWFMYQ 366
            ++IP WF +Q
Sbjct: 1018 NEIPGWFNHQ 1027



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 36/188 (19%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FPDIV  ++       D T I ELS +I  + GL  L++N CK LE + R
Sbjct: 767 CSKL----ENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISR 822

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI---L 756
           +I  LK L  L+LSG S+ +  P      + L E  + GT+IR LPASI LL       L
Sbjct: 823 SIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSL 882

Query: 757 SNLKDC----------------------KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             L+ C                       N  SLP +IN L  L  +    C+ L+++ E
Sbjct: 883 DGLRACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLE 942

Query: 795 TLGKVESL 802
              KV+++
Sbjct: 943 VPSKVQTV 950



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  C+++  LP  +  ++ L    L G SK   FP+I  + + L+++ L+ T I 
Sbjct: 736 LQYVNLINCRSIRILPSNLE-MESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIA 794

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L  SI  + G  + ++ +CK L+S+  +I  L+SL+ +  SGCS+LKN+   L KVESL
Sbjct: 795 ELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESL 854

Query: 803 E 803
           E
Sbjct: 855 E 855



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 560 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----LDIPGI 607

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L ++ + +  E PE  S++                    D+L
Sbjct: 608 KEAQWNMKAFSKMSKLRLLKINNV-QLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDEL 666

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +   L   P  + G+ +L  +   GC  L  
Sbjct: 667 VELHMANSSIEQLWYGYKSAVKLKIINLSNSLYLSKSPD-LTGIPNLESLILEGCISLSE 725

Query: 792 VTETLGKVESLE 803
           V  +LG+ + L+
Sbjct: 726 VHPSLGRHKKLQ 737


>gi|408537064|gb|AFU75185.1| nematode resistance-like protein, partial [Solanum bukasovii]
          Length = 307

 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/288 (45%), Positives = 189/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L+N+PD LG +  LE+L  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 NLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L DC RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKQITANECTSLMSI 290



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCS LKN+ + LG +  LE
Sbjct: 126 VSGCSNLKNLPDDLGLLVGLE 146



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
            LK  P  +  +  L KL+   T+I  +PSS+ LL  L+ L L  C  L           
Sbjct: 131 NLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
                   +++GL SL  L+LS C   +  +   LG + SLE L ++G      P +SI 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFSNIPDASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  L+ L    C
Sbjct: 251 RLTRLKCLKLHDC 263



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 24/204 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG S  +  P+       L ++H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSNLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S CS     +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSNIPDASISRLTRL 255



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L  LNL  C  L+ +P  + ++E LE L ++G +
Sbjct: 1   PNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRI-RLEKLEILVLTGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY    +     AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  LD+S C      +P D+  L  L++L+       T+P+S+S L NL+ L L  C  
Sbjct: 120 CLKTLDVSGCS-NLKNLPDDLGLLVGLEKLHCTHTAIQTIPSSMSLLKNLKRLSLRGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|224105385|ref|XP_002333825.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838630|gb|EEE76995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 920

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/349 (40%), Positives = 201/349 (57%), Gaps = 39/349 (11%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 584 LTGILNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRILPNNLE-MESLKVCTL 642

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M  L+ L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 643 DGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSI 702

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+ +P+ LGKVESLEE DVSGT+IR+  +SIFL+KNL+ L   G
Sbjct: 703 GCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDG 762

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C                            LPS +G+C L           E A+P DI  
Sbjct: 763 CERIAK-----------------------LPSYSGLCYL-----------EGALPEDIGY 788

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
             SL+ L L++NNF +LP SI+ L  LE L L+DC+ L+SLP++P  +Q V  NGC  L 
Sbjct: 789 SSSLRSLDLSQNNFGSLPKSINQLSELEMLVLKDCRMLESLPEVPSKVQTVNLNGCIRLK 848

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLELQAVSD 345
            +   ++L  SK +   C++ L+L   NG   + ++ML  YL++  + D
Sbjct: 849 EIPDPIELSSSKISEFICLNCLELYDHNGQDSMGLTMLERYLQVCLIQD 897



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L    L G SK  +FP+I  + + L  + L+ T I 
Sbjct: 614 LQYVNLVKCKSIRILPNNLE-MESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGIT 672

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  L G  L ++  CKNL+S+PS+I  L+SL+ +  SGCS+LK + E LGKVESL
Sbjct: 673 KLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESL 732

Query: 803 E 803
           E
Sbjct: 733 E 733



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 47/199 (23%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I +L  +I  L GL  L++N CKNLE +P 
Sbjct: 645 CSKL----EKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPS 700

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E  + GT+IR LPASI LL    + + 
Sbjct: 701 SIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSS 760

Query: 760 KDCK------------------------------------NLKSLPSTINGLRSLRMMYP 783
             C+                                    N  SLP +IN L  L M+  
Sbjct: 761 DGCERIAKLPSYSGLCYLEGALPEDIGYSSSLRSLDLSQNNFGSLPKSINQLSELEMLVL 820

Query: 784 SGCSKLKNVTETLGKVESL 802
             C  L+++ E   KV+++
Sbjct: 821 KDCRMLESLPEVPSKVQTV 839



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 438 GKEIVRCESPEEPGRRSRLW----TYKDVCLALMDNTGKEK----IEAIF----LDMPGI 485

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S+                     D+L
Sbjct: 486 KEAQWNMKAFSKMSRLRLLKIHNV-QLSEGPEALSNELRFLEWNSYPSKSLPACFQMDEL 544

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +  NL   P  + G+ +L  +   GC+ L  
Sbjct: 545 VELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPD-LTGILNLESLILEGCTSLSE 603

Query: 792 VTETLGKVESLE 803
           V  +L   + L+
Sbjct: 604 VHPSLAHHKKLQ 615


>gi|408537102|gb|AFU75204.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/288 (45%), Positives = 187/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKKIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LE+L  + TAI    SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL +LDLSDC + +  I S++  L SLK L L+ NNF 
Sbjct: 189 ----GRKS--MGVNFQNLSGLCSLIRLDLSDCDISDGGILSNLGFLSSLKVLLLDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L L  C RL+SLP++PP++  + A+ C+SL+++
Sbjct: 243 NIPAASISRLTRLKSLALRGCGRLESLPELPPSITGIYAHDCTSLMSI 290



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKKIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKLKN+ + LG +  LE
Sbjct: 126 VSGCSKLKNLPDDLGLLVGLE 146



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 114/212 (53%), Gaps = 23/212 (10%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L KL+   T+I  +PSS+ LL  L+ L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNALSSQVSSSSHGR 190

Query: 123 KSLKT--LNLSGCCKL------------ENVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+     NLSG C L              +   LG + SL+ L + G      P +SI 
Sbjct: 191 KSMGVNFQNLSGLCSLIRLDLSDCDISDGGILSNLGFLSSLKVLLLDGNNFSNIPAASIS 250

Query: 168 LMKNLRSLYFSGCNE-------PPASASWHLH 192
            +  L+SL   GC         PP+    + H
Sbjct: 251 RLTRLKSLALRGCGRLESLPELPPSITGIYAH 282



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 3/122 (2%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L ++H   TAI  +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCN 177

Query: 764 NL 765
            L
Sbjct: 178 AL 179



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L  LNL  C  L+ +P  + ++E LE L ++G +
Sbjct: 1   PNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKKI-RLEKLEILVLTGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY    +     AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  LD+S C      +P D+  L  L++L+       T+P+S+S L NL+ L L  C  
Sbjct: 120 CLKTLDVSGCS-KLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLKRLSLRGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|408537068|gb|AFU75187.1| nematode resistance-like protein, partial [Solanum commersonii]
          Length = 307

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/288 (45%), Positives = 187/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++L L  T+++E+P+SIE L G+ ++ L+ C +L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELCLGATALSEIPASIENLSGVGVINLSYCNHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SSI L+KNL+ L  SGCN   +  S   H  
Sbjct: 131 KLKNLPDDLGFLVGLEELHCTHTAIQTIPSSISLLKNLKHLSLSGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL +LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIRLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPAASISHLTRLKRLKLHSCGRLESLPELPPSIKVIHANECTSLMSI 290



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/141 (46%), Positives = 88/141 (62%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E+ L  TA+  +PASIE LSG  + NL  C +L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELCLGATALSEIPASIENLSGVGVINLSYCNHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCSKLKN+ + LG +  LE
Sbjct: 126 VSGCSKLKNLPDDLGFLVGLE 146



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 31/214 (14%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++L L  T+++E+P+SIE L+G+ ++ L  C +L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELCLGATALSEIPASIENLSGVGVINLSYCNHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L+   T+I  +PSSI LL  L+ L L+ C  L           
Sbjct: 131 KLKNLPDDLGFLVGLEELHCTHTAIQTIPSSISLLKNLKHLSLSGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SLE L ++G      P 
Sbjct: 191 KSMGVNFQNLSGLCSLIRLDLSDC----NISDGGILSNLGFLPSLEILILNGNNFSNIPA 246

Query: 164 SSIFLMKNLRSLYFSGCNE-------PPASASWH 190
           +SI  +  L+ L    C         PP+    H
Sbjct: 247 ASISHLTRLKRLKLHSCGRLESLPELPPSIKVIH 280



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 24/209 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + E+  +IE L G+  + L+ C +LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELCLGATALSEIPASIENLSGVGVINLSYCNHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L E+H   TAI+ +P+SI LL      +L  C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGFLVGLEELHCTHTAIQTIPSSISLLKNLKHLSLSGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL  +  S C+     +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCNISDGGILSNLGFLPSLEILILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
                  N+F  +  +++  +T+L + +L
Sbjct: 238 G------NNFSNIPAASISHLTRLKRLKL 260


>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1561

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/460 (33%), Positives = 233/460 (50%), Gaps = 37/460 (8%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +++  LYL+GT+I E+PSSI  L  L  L L GC  L +LP  +S L CL  L+LSGCS 
Sbjct: 785  RNIRYLYLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSKLVCLEKLDLSGCSN 844

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            + +FP++  ++++L   YL+GT+I E+PSSIE L  L  L+L  CK    LPSSI  L+ 
Sbjct: 845  ITEFPKVSNTIKEL---YLNGTAIREIPSSIECLFELAELHLRNCKQFEILPSSICKLRK 901

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L+ LNLSGC +  + P+ L  +  L  L +  T I +  S I  +K L  L    C    
Sbjct: 902  LQRLNLSGCVQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCQH-- 959

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                         L    C V L LP    +  L KL+L  C + E  +P  +  + SL+
Sbjct: 960  -------------LRDIECIVDLQLPERCKLDCLRKLNLDGCQIWE--VPDSLGLVSSLE 1004

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL--- 301
             L L+ NNF ++P SI+ L  L+ L L +C+ L+SLP++PP L  + A+ C SL T+   
Sbjct: 1005 VLDLSGNNFRSIPISINKLFELQYLGLRNCRNLESLPELPPRLSKLDADNCWSLRTVSCS 1064

Query: 302  FGALKLCRSKYTIINCIDSLK---LLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
              A++    ++   NC    +   +L  + L   +  + L  Q    P    S   PG  
Sbjct: 1065 STAVEGNIFEFIFTNCKRLRRINQILEYSLLKFQLYTKRLYHQLPDVPEEACSFCLPGDM 1124

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV--FQVPKHSTG---TYLFHSY--P 411
             P+WF +Q+ GS +T    S+ +   K +GF++C V  F    HS     TY FH+    
Sbjct: 1125 TPEWFSHQSWGSIVTFQLSSH-WAHTKFLGFSLCAVIAFHSFSHSLQVKCTYHFHNEHGD 1183

Query: 412  AHELECSMD-GSGEGHYIYFRGKFG--HVVSDHLWLLFLP 448
            +H+L C +    G   Y Y    +G   + S H+++   P
Sbjct: 1184 SHDLYCYLHVCYGNDLYCYLHDWYGEKRINSKHIFVGLDP 1223



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 3/150 (2%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS +    D   +I  +  +GT I EL  +I  L  L+ L L GC  L+ LP  +S L  
Sbjct: 774 CSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSKLVC 833

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L  L+LSG S   EFP+++++   + E++L GTAIR +P+SIE L      +L++CK  +
Sbjct: 834 LEKLDLSGCSNITEFPKVSNT---IKELYLNGTAIREIPSSIECLFELAELHLRNCKQFE 890

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            LPS+I  LR L+ +  SGC + ++  E L
Sbjct: 891 ILPSSICKLRKLQRLNLSGCVQFRDFPEVL 920



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 12/160 (7%)

Query: 656  EFPDIVQVLSD----GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
            EFP +   + +    GT IRE+  +IE LF L +L L  CK  E LP +I  L+ L  LN
Sbjct: 847  EFPKVSNTIKELYLNGTAIREIPSSIECLFELAELHLRNCKQFEILPSSICKLRKLQRLN 906

Query: 712  LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
            LSG  +FR+FPE+      L  ++LE T I  LP+ I  L G     + +C++L+ +   
Sbjct: 907  LSGCVQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCQHLRDIECI 966

Query: 772  IN-------GLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            ++        L  LR +   GC ++  V ++LG V SLEV
Sbjct: 967  VDLQLPERCKLDCLRKLNLDGC-QIWEVPDSLGLVSSLEV 1005



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL  +I  L GLV L L  CK L  LP  +  LK L   ++SG S     P+ + +
Sbjct: 727 TAVEELPQSIGELNGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRLPDFSRN 786

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              +  ++L GTAI  LP+SI  L   I  +L  C  LK+LPS ++ L  L  +  SGCS
Sbjct: 787 ---IRYLYLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSKLVCLEKLDLSGCS 843

Query: 788 KLKNVTE 794
              N+TE
Sbjct: 844 ---NITE 847



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 16/186 (8%)

Query: 617 MISVDSGCMSCYKKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQV-------LSDGT 668
           ++ ++  C    + W G Q +         NC    E     PD+ +        L   T
Sbjct: 605 LVEINLSCSKVNRLWRGHQNLVNLKDVNLSNC----EHITFMPDLSKARNLERLNLQFCT 660

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
            + +   +++ L  LV L L GCK L  LP  I++   L TLN+SG +  ++ PE     
Sbjct: 661 SLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRINS-SCLETLNVSGCANLKKCPETAR-- 717

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            +L  ++L  TA+  LP SI  L+G +  NLK+CK L +LP  +  L+SL +   SGCS 
Sbjct: 718 -KLTYLNLNETAVEELPQSIGELNGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSS 776

Query: 789 LKNVTE 794
           +  + +
Sbjct: 777 ISRLPD 782



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 133/307 (43%), Gaps = 49/307 (15%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  L+ DG  +T +PS+      +E+     C  ++ L     +L  L+ + LS C  
Sbjct: 581 EELRYLHWDGYPLTSLPSNFRPQNLVEINL--SCSKVNRLWRGHQNLVNLKDVNLSNCEH 638

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +   P       DLSK                    LE L L  C +LV+ PSS+  L  
Sbjct: 639 ITFMP-------DLSKA-----------------RNLERLNLQFCTSLVKFPSSVQHLDK 674

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE-- 182
           L  L+L GC +L N+P  +     LE L+VSG A  +        +  R L +   NE  
Sbjct: 675 LVDLDLRGCKRLINLPSRINS-SCLETLNVSGCANLKKCP-----ETARKLTYLNLNETA 728

Query: 183 ----PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDI 237
               P +    +  +  NL    +C + + LP ++  + SL   D+S C    ++I    
Sbjct: 729 VEELPQSIGELNGLVALNL---KNCKLLVNLPENMYLLKSLLIADISGC----SSISRLP 781

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANG 294
           D   +++ LYLN      LP+SI  L  L  L+L  C RL++LP        L+ +  +G
Sbjct: 782 DFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSKLVCLEKLDLSG 841

Query: 295 CSSLVTL 301
           CS++   
Sbjct: 842 CSNITEF 848



 Score = 42.7 bits (99), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 351  SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAIC-----CVFQVPKHSTGTY 405
            S   PG   P+WF +Q  GS++T    S   N    +GF +C     C F        TY
Sbjct: 1355 SFYLPGDVTPEWFSHQRWGSTVTFHLSSQWANSKSFLGFCLCAVIAFCSFGHSLQVKCTY 1414

Query: 406  LFHSYPAHELECSMDGSGEGHYIYFRGKFGH--VVSDHLWLLFLP 448
             F         C+  G     Y Y R  +    + S H+++ F P
Sbjct: 1415 HF---------CNEHGDSHDLYFYLRDWYDKECINSTHIFVGFDP 1450


>gi|332330342|gb|AEE43928.1| TIR-NBS-LRR resistance protein muRdr1D [Rosa multiflora]
          Length = 1156

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 174/539 (32%), Positives = 271/539 (50%), Gaps = 71/539 (13%)

Query: 48   ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYL 106
            I  L  L++++LS    LK+ P     +++L KL L G T++ ++  SI LL  L++   
Sbjct: 623  IKYLGKLKSIDLSYSINLKRTPDFTG-IQNLEKLVLKGCTNLVKIHPSIALLKRLKIWNF 681

Query: 107  NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
              CK++  LPS +N ++ L+T ++SGC KL+ +P+ +G+++ L +L + GTA+ +  SSI
Sbjct: 682  RNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQMKRLSKLCLGGTAVEKLPSSI 740

Query: 167  --FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG-------KSSCPVALMLPSLTGVCS 217
               + ++L  L   G        S+ L L   ++        KS  P+  +L SL    S
Sbjct: 741  EHLMSESLVELDLKGIFMREQPYSFFLKLQNRIVSSFGLFPRKSPHPLVPLLASLKHFSS 800

Query: 218  LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            LT L+L+DC L E  IP+DI +L SL+ L L  NNFV+LP SI  L  L+ +++++CKRL
Sbjct: 801  LTTLNLNDCNLCEGEIPNDIGSLSSLERLELRGNNFVSLPVSIHLLFKLQGIDVQNCKRL 860

Query: 278  QSLPQIPPNLQF-VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA---ISM 333
            Q LP +P +    V+++ C+SL  L     LCR  Y  +NC++ L  +     +    S+
Sbjct: 861  QQLPDLPVSRSLQVKSDNCTSLQVLPDPPDLCRLSYFSLNCVNCLSTVGNQDASYFLYSV 920

Query: 334  LREYLE------------------------LQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
            L+  LE                        +Q       +   V PGS+IP+WF  Q+ G
Sbjct: 921  LKRLLEVLSLSLSLSLSLSLSQWLCDMMVHMQETPRSFRRFRFVIPGSEIPEWFDNQSVG 980

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH--------ELEC--SM 419
             S+T   PS   N NK +GFA+C +F VP+ +       + P          E+ C  + 
Sbjct: 981  DSVTEKLPSGACN-NKWIGFAVCALF-VPQDNPS-----AVPEDPGLVPDTCEIWCRWNS 1033

Query: 420  DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSF---RSISDPT-WKV 475
            DG   G + +   +F   VSDHL+LL  P    N  +  N ++  F   R++ + T  KV
Sbjct: 1034 DGISSGGHGFPVKQF---VSDHLFLLVFPSPFRNPDYTWNEVKFFFKVTRAVGNNTCIKV 1090

Query: 476  KRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHD-----FVGSNMEVAQASGSGSS 529
            K+CG   +Y H+ EE      QS + +S +L E   D      V +  E A  SGSG S
Sbjct: 1091 KKCGVRALYEHDTEELISKMNQS-KGSSISLYEEAMDEQEGAMVKAKQEAA-TSGSGVS 1147



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 45/262 (17%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              +++L  L L G T++ ++  SI LL  L++   + CK++ SLP  + +++ L T ++
Sbjct: 646 FTGIQNLEKLVLKGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDV 704

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN------------ 107
           SGCSKLK  P+ V  M+ LSKL L GT++ ++PSSIE L    L+ L+            
Sbjct: 705 SGCSKLKMIPEFVGQMKRLSKLCLGGTAVEKLPSSIEHLMSESLVELDLKGIFMREQPYS 764

Query: 108 ---ECKN----------------LVRLPSSINGLKSLKTLNLSGC--CKLENVPDTLGKV 146
              + +N                LV L +S+    SL TLNL+ C  C+ E +P+ +G +
Sbjct: 765 FFLKLQNRIVSSFGLFPRKSPHPLVPLLASLKHFSSLTTLNLNDCNLCEGE-IPNDIGSL 823

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSS 202
            SLE L++ G        SI L+  L+ +    C      P    S  L      +   +
Sbjct: 824 SSLERLELRGNNFVSLPVSIHLLFKLQGIDVQNCKRLQQLPDLPVSRSLQ-----VKSDN 878

Query: 203 CPVALMLPSLTGVCSLTKLDLS 224
           C    +LP    +C L+   L+
Sbjct: 879 CTSLQVLPDPPDLCRLSYFSLN 900



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL   T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG SK +  P
Sbjct: 656 VLKGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIP 714

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           E      +L ++ L GTA+  LP+SIE L    L  L
Sbjct: 715 EFVGQMKRLSKLCLGGTAVEKLPSSIEHLMSESLVEL 751



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 4/121 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L+L   K ++ L   I  L  L +++LS     +  P+ T  ++ L ++ L+G T +
Sbjct: 606 LAELSLAYSK-IDHLWNGIKYLGKLKSIDLSYSINLKRTPDFTGIQN-LEKLVLKGCTNL 663

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  SI LL    + N ++CK++KSLPS +N +  L     SGCSKLK + E +G+++ 
Sbjct: 664 VKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQMKR 722

Query: 802 L 802
           L
Sbjct: 723 L 723


>gi|359493553|ref|XP_003634625.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1273

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 168/504 (33%), Positives = 239/504 (47%), Gaps = 59/504 (11%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            MK L +L+LD T+I E+ SSI  +T LELL+L+ CKNL SLP  I  L+ L TL+L  CS
Sbjct: 762  MKGLRELWLDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCS 821

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
             L+ FP+I+  M+ L  L L GT I ++ +  E L  L    L  CKNL  LPS+I  L+
Sbjct: 822  NLETFPEIMEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLE 881

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            SL TL+L+ C  LE  P+ +  ++ L+ LD+ GTAI+   SS+  +K LR L  S C   
Sbjct: 882  SLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNL 941

Query: 184  PASASWHLHLPFNL-LGKSSCPVALMLP----SLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                     L F + L    CP     P    +L G+ SL  LDLS C   E AI SDI 
Sbjct: 942  ETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLSYCDGMEGAIFSDIG 1001

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
              + L+EL ++                        CK LQ +P+ P  L+ + A+ C++L
Sbjct: 1002 QFYKLRELNISH-----------------------CKLLQEIPEFPSTLREIDAHDCTAL 1038

Query: 299  VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
             TLF       S +        LKLL K+    S       +  ++ PG         S 
Sbjct: 1039 ETLFSPSSPLWSSF--------LKLL-KSATQDSECDTQTGISKINIPG--------SSG 1081

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ----VPKHSTGTY-LFHSYPAH 413
            IP+W  YQ  G+ I +  P  LY  N   GFA   ++Q      KH    + L +S+   
Sbjct: 1082 IPRWVSYQKMGNHIRIRLPMNLYEDNNFFGFAFFYLYQKVNGSEKHFEDDFPLLYSWKL- 1140

Query: 414  ELECSMDGSGEGHYIYFRG----KFGHVVSDHLWLLFLPRHGHNWQFESNLIR---LSFR 466
             L  S D      +I +      K    VSD LW+++ P+     + +SN  R   +SF 
Sbjct: 1141 -LGGSSDKGDSSFFINYDPCECYKSNGGVSDRLWVVYYPKVAVLDEHDSNQRRSLEISFD 1199

Query: 467  SISDPTWKVKRCGFHPIYMHEVEE 490
            S       +K  G H +Y+ + ++
Sbjct: 1200 SHQATCVNIKGVGIHLVYIQDHQQ 1223



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 36/305 (11%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI-VAS 74
           S+ ++ SSI +LT L  L L  CK L SLP +I  L  L  L L  CS L+KF ++    
Sbjct: 702 SLDKIDSSIGVLTKLTWLDLSNCKLLKSLPSSIQYLDSLEELYLRNCSSLEKFLEMERGC 761

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M+ L +L+LD T+I E+ SSI  +  LELL L  CKNL  LPS+I GL+SL TL+L  C 
Sbjct: 762 MKGLRELWLDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCS 821

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            LE  P+ +  ++ LE L++ GT I++  +    +  L  L+FS C              
Sbjct: 822 NLETFPEIMEDMQHLESLNLRGTGIKQIAAPFEHLNQL--LFFSLC-------------- 865

Query: 195 FNLLGKSSCPVALMLPSLTGVC---SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                   C     LPS   +C   SLT LDL+ C   E   P  ++++  LK L L   
Sbjct: 866 -------FCKNLRSLPS--NICRLESLTTLDLNHCSNLE-TFPEIMEDMQELKNLDLRGT 915

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF---VRANGCSSLVTL---FGAL 305
               LP+S+  +  L  L+L +CK L++LP    +L+F   + A+GC  L       G L
Sbjct: 916 AIKELPSSVQRIKRLRYLDLSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGNL 975

Query: 306 KLCRS 310
           K  RS
Sbjct: 976 KGLRS 980



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 3/158 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L L GT I ++ +  E L  L   +L  CKNL SLP  I  L+ L TL+L+
Sbjct: 830 MEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLESLTTLDLN 889

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            CS L+ FP+I+  M++L  L L GT+I E+PSS++ +  L  L L+ CKNL  LP +I 
Sbjct: 890 HCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNLETLPHTIY 949

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVE---SLEELDVS 155
            L+ L  L   GC KL+  P  +G ++   SLE LD+S
Sbjct: 950 DLEFLVDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLS 987



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 11/164 (6%)

Query: 646 NCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           +CS L    + FP+I++ +         GT I++++   E L  L+  +L  CKNL  LP
Sbjct: 819 DCSNL----ETFPEIMEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLP 874

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
             I  L+ L+TL+L+  S    FPEI     +L  + L GTAI+ LP+S++ +      +
Sbjct: 875 SNICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLD 934

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L +CKNL++LP TI  L  L  +   GC KLK     +G ++ L
Sbjct: 935 LSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGNLKGL 978



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 75/138 (54%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T I ELS +I  +  L  L+L  CKNL+ LP  I  L+ L+TL+L   S    FPEI 
Sbjct: 771 DNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCSNLETFPEIM 830

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
                L  ++L GT I+ + A  E L+  +  +L  CKNL+SLPS I  L SL  +  + 
Sbjct: 831 EDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLESLTTLDLNH 890

Query: 786 CSKLKNVTETLGKVESLE 803
           CS L+   E +  ++ L+
Sbjct: 891 CSNLETFPEIMEDMQELK 908



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 38/258 (14%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           S +++  Q    +  L  L L G++  +  S+   +P LE L L  C +L ++ SSI  L
Sbjct: 654 SNIRQLWQGNKCLGKLKVLNLQGSTQLDHISNFSTMPNLERLNLRLCGSLDKIDSSIGVL 713

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI--FL------MKNLRS 174
             L  L+LS C  L+++P ++  ++SLEEL +      R  SS+  FL      MK LR 
Sbjct: 714 TKLTWLDLSNCKLLKSLPSSIQYLDSLEELYL------RNCSSLEKFLEMERGCMKGLRE 767

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEA-- 231
           L+         S+S        LL    C     LPS + G+ SLT LDL DC   E   
Sbjct: 768 LWLDNTAIEELSSSIVHITSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCSNLETFP 827

Query: 232 AIPSDIDNLHSL-------KEL-----YLNR---------NNFVTLPASISGLLNLEELE 270
            I  D+ +L SL       K++     +LN+          N  +LP++I  L +L  L+
Sbjct: 828 EIMEDMQHLESLNLRGTGIKQIAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLESLTTLD 887

Query: 271 LEDCKRLQSLPQIPPNLQ 288
           L  C  L++ P+I  ++Q
Sbjct: 888 LNHCSNLETFPEIMEDMQ 905


>gi|105922738|gb|ABF81434.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1307

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/289 (44%), Positives = 177/289 (61%), Gaps = 25/289 (8%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L    L
Sbjct: 672 LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKSIRILPNNLE-MESLNVFTL 730

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M +L  L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 731 DGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSI 790

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+ +P+ LG+VESL+E D SGT+IR+  +SIF++KNL+ L   G
Sbjct: 791 GCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDG 850

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C                          ++LPSL+G+CSL  L L  C L E A+P DI  
Sbjct: 851 CKR-----------------------IVVLPSLSGLCSLEVLGLRACNLREGALPEDIGC 887

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           L SLK L L++NNFV+LP SI+ L  LE L LEDC  L+SLP++P  +Q
Sbjct: 888 LSSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQ 936



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 104/218 (47%), Gaps = 54/218 (24%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M +L  L LD T IT++ SSI  L GL LL++  CKNL S+P +I  LK L+ L+LS
Sbjct: 743 VGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLS 802

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK---------- 110
           GCS+LK  P+ +  +E L +    GTSI ++P+SI +L  L++L L+ CK          
Sbjct: 803 GCSELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSLDGCKRIVVLPSLSG 862

Query: 111 -------------------------------------NLVRLPSSINGLKSLKTLNLSGC 133
                                                N V LP SIN L  L+ L L  C
Sbjct: 863 LCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFVSLPKSINQLFELEMLVLEDC 922

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
             LE++P+   KV+       +G +  RP  SI +  N
Sbjct: 923 TMLESLPEVPSKVQ-------TGLSNPRPGFSIAVPGN 953



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 12/148 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I +LS +I  L GL  L++N CKNLE +P 
Sbjct: 733 CSKL----EKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLLSMNSCKNLESIPS 788

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E    GT+IR LPASI +L    + +L
Sbjct: 789 SIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLKVLSL 848

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             CK +  LPS ++GL SL ++    C+
Sbjct: 849 DGCKRIVVLPS-LSGLCSLEVLGLRACN 875



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 76/121 (62%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L+   L G SK  +FP+I  + ++L+ + L+ T I 
Sbjct: 702 LQYVNLVNCKSIRILPNNLE-MESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGIT 760

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  L G  L ++  CKNL+S+PS+I  L+SL+ +  SGCS+LK + E LG+VESL
Sbjct: 761 KLSSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESL 820

Query: 803 E 803
           +
Sbjct: 821 D 821



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 121/311 (38%), Gaps = 70/311 (22%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSI---------------- 166
           +LK +NLS    L   PD  G + +LE L + G T++     S+                
Sbjct: 654 NLKIINLSNSLYLTKTPDLTG-IPNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVNCKS 712

Query: 167 -------FLMKNLRSLYFSGCNE------------------------PPASASWHLHLPF 195
                    M++L      GC++                           S+S H  +  
Sbjct: 713 IRILPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGL 772

Query: 196 NLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
            LL  +SC     +PS  G + SL KLDLS C      IP  +  + SL E   +  +  
Sbjct: 773 GLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS-ELKYIPEKLGEVESLDEFDASGTSIR 831

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRANGCS----SLVTLFGALKLC 308
            LPASI  L NL+ L L+ CKR+  LP +    +L+ +    C+    +L    G L   
Sbjct: 832 QLPASIFILKNLKVLSLDGCKRIVVLPSLSGLCSLEVLGLRACNLREGALPEDIGCLSSL 891

Query: 309 RSKYTIINCIDSL-----KLLRKNGLAI---SMLREYLEL-----QAVSDPGHKLSIVFP 355
           +S     N   SL     +L     L +   +ML    E+       +S+P    SI  P
Sbjct: 892 KSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPEVPSKVQTGLSNPRPGFSIAVP 951

Query: 356 GSQIPKWFMYQ 366
           G++I  WF +Q
Sbjct: 952 GNEILGWFNHQ 962



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR + P+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 526 GKEIVRCEDPKEPGKRSRLW----TYKDVFLALMDNTGKEK----IEAIF----LDMPGI 573

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S+                     D+L
Sbjct: 574 KEAQWNMKAFSKMSRLRLLKIDNV-QLSEGPEDLSNELRFIEWHSYPSKSLPSGLQVDEL 632

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  +++  L    +      + NL +   L   P  + G+ +L  +   GC+ L  
Sbjct: 633 VELHMANSSLEQLWCGCKSAVNLKIINLSNSLYLTKTPD-LTGIPNLESLILEGCTSLSE 691

Query: 792 VTETLGKVESLE 803
           V  +L   + L+
Sbjct: 692 VHPSLAHHKKLQ 703


>gi|359496034|ref|XP_002277500.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1132

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 164/502 (32%), Positives = 251/502 (50%), Gaps = 54/502 (10%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            S K+L DL L  + + ++   I++L  L+ + L   K L   P   S +  L  L+L+GC
Sbjct: 579  SPKNLVDLSLSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETP-NFSGISNLEKLDLTGC 637

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            + L+                       EV  ++ +L  L  L L +CK L  +P+SI  L
Sbjct: 638  TYLR-----------------------EVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKL 674

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            KSL+T   SGC K+EN P+  G +E L+EL    TAI    SSI  ++ L+ L F+GC  
Sbjct: 675  KSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGCKG 734

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            PP SASW   LP     KSS     +L  L+G+ SL +L+L DC + E A  S +  L S
Sbjct: 735  PP-SASWLTLLP----RKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSS 789

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT-- 300
            L+ L L+ NNF++LP+S+S L  L  L+L++C+RLQ+L ++P +++ + A+ C SL T  
Sbjct: 790  LEYLDLSGNNFISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEIDAHNCMSLETIS 849

Query: 301  ---LFGALKLCRSKYTIINCIDSLKLLRKN-GLAISMLREYLELQAVSDPGH-------- 348
               LF +L+      +   C+  +K  + N G  +  L  +L+    S            
Sbjct: 850  NRSLFPSLR----HVSFGECL-KIKTYQNNIGSMLQALATFLQTHKRSRYARDNPESVTI 904

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF---QVPKHSTGTY 405
            + S V PGS+IP WF YQ+ G+ + +  P   +N N  +GFA+  VF    +P ++    
Sbjct: 905  EFSTVVPGSEIPDWFSYQSSGNVVNIELPPNWFNSN-FLGFALSAVFGFDPLPDYNPNHK 963

Query: 406  LFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSF 465
            +F  +     + S     +  + Y  G    + SDHLWL + P        E N  + +F
Sbjct: 964  VFCLFCIFSFQNSAASYRDNVFHYNSGP-ALIESDHLWLGYAPVVSSFKWHEVNHFKAAF 1022

Query: 466  RSISDPTWKVKRCGFHPIYMHE 487
            + I    + VKRCG H +Y  E
Sbjct: 1023 Q-IYGRHFVVKRCGIHLVYSSE 1043



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 101/199 (50%), Gaps = 19/199 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G T + EV  ++ +L  L  L+L+ CK L ++P +I  LK L T   
Sbjct: 623 FSGISNLEKLDLTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIF 682

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN------LV 113
           SGCSK++ FP+   ++E L +LY D T+I+ +PSSI  L  L++L  N CK       L 
Sbjct: 683 SGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGCKGPPSASWLT 742

Query: 114 RLP-----------SSINGLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSGTAIRR 161
            LP           S ++GL SLK LNL  C   E      L  + SLE LD+SG     
Sbjct: 743 LLPRKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSSLEYLDLSGNNFIS 802

Query: 162 PTSSIFLMKNLRSLYFSGC 180
             SS+  +  L SL    C
Sbjct: 803 LPSSMSQLSQLVSLKLQNC 821



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 48/221 (21%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEF---------PDIVQVLSDGTDIRELSLAIEL 679
           ++ GR+ +R+ SP+EPG  SRLW   D +          ++  +  + +DI E+    + 
Sbjct: 484 QEMGRKIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDIEEIHFTTKA 543

Query: 680 LFG------------------------------------LVQLTLNGCKNLERLPRTISA 703
             G                                    LV L+L+ C ++++L + I  
Sbjct: 544 FAGMDKLRLLKFYDYSPSTNSECTSKRKCKLPHDFSPKNLVDLSLS-CSDVKQLWKGIKV 602

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDC 762
           L  L  ++LS      E P   S    L ++ L G T +R +  ++ +L      +L+DC
Sbjct: 603 LDKLKFMDLSHSKYLVETPNF-SGISNLEKLDLTGCTYLREVHPTLGVLGKLSFLSLRDC 661

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           K LK++P++I  L+SL     SGCSK++N  E  G +E L+
Sbjct: 662 KMLKNIPNSICKLKSLETFIFSGCSKVENFPENFGNLEQLK 702



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L+  T +RE+   + +L  L  L+L  CK L+ +P +I  LK L T   SG SK   FPE
Sbjct: 634 LTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPE 693

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASI 748
              + +QL E++ + TAI  LP+SI
Sbjct: 694 NFGNLEQLKELYADETAISALPSSI 718


>gi|408537072|gb|AFU75189.1| nematode resistance-like protein, partial [Solanum etuberosum]
          Length = 307

 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/288 (47%), Positives = 192/288 (66%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI++  SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L DC RL+SLP++PP+++ + ANGC+SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 290



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L    T+I ++PSS+ LL  L+ L L  C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
                   +++GL SL  L+LS C   +  +   LG + SLE L ++G      P +SI 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFSNIPDASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  L+ L    C
Sbjct: 251 RLTRLKCLKLHDC 263



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 24/204 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L E+    TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S CS     +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSNIPDASISRLTRL 255



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 81/181 (44%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L  LNL  C  L+ +P  + ++E LE L +SG +
Sbjct: 1   PNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRI-RLEKLEILVLSGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY    +     AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  LD+S C      +P D+  L  L+EL         +P+S+S L NL+ L L  C  
Sbjct: 120 CLKTLDVSGCS-KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|296090597|emb|CBI40966.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 164/502 (32%), Positives = 251/502 (50%), Gaps = 54/502 (10%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            S K+L DL L  + + ++   I++L  L+ + L   K L   P   S +  L  L+L+GC
Sbjct: 605  SPKNLVDLSLSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETP-NFSGISNLEKLDLTGC 663

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            + L+                       EV  ++ +L  L  L L +CK L  +P+SI  L
Sbjct: 664  TYLR-----------------------EVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKL 700

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            KSL+T   SGC K+EN P+  G +E L+EL    TAI    SSI  ++ L+ L F+GC  
Sbjct: 701  KSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQVLSFNGCKG 760

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            PP SASW   LP     KSS     +L  L+G+ SL +L+L DC + E A  S +  L S
Sbjct: 761  PP-SASWLTLLP----RKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLAILSS 815

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT-- 300
            L+ L L+ NNF++LP+S+S L  L  L+L++C+RLQ+L ++P +++ + A+ C SL T  
Sbjct: 816  LEYLDLSGNNFISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEIDAHNCMSLETIS 875

Query: 301  ---LFGALKLCRSKYTIINCIDSLKLLRKN-GLAISMLREYLELQAVSDPGH-------- 348
               LF +L+      +   C+  +K  + N G  +  L  +L+    S            
Sbjct: 876  NRSLFPSLR----HVSFGECL-KIKTYQNNIGSMLQALATFLQTHKRSRYARDNPESVTI 930

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF---QVPKHSTGTY 405
            + S V PGS+IP WF YQ+ G+ + +  P   +N N  +GFA+  VF    +P ++    
Sbjct: 931  EFSTVVPGSEIPDWFSYQSSGNVVNIELPPNWFNSN-FLGFALSAVFGFDPLPDYNPNHK 989

Query: 406  LFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSF 465
            +F  +     + S     +  + Y  G    + SDHLWL + P        E N  + +F
Sbjct: 990  VFCLFCIFSFQNSAASYRDNVFHYNSGP-ALIESDHLWLGYAPVVSSFKWHEVNHFKAAF 1048

Query: 466  RSISDPTWKVKRCGFHPIYMHE 487
            + I    + VKRCG H +Y  E
Sbjct: 1049 Q-IYGRHFVVKRCGIHLVYSSE 1069



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 97/245 (39%), Gaps = 70/245 (28%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEF---------PDIVQVLSDGTDIRELSLAIEL 679
           ++ GR+ +R+ SP+EPG  SRLW   D +          ++  +  + +DI E+    + 
Sbjct: 484 QEMGRKIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDIEEIHFTTKA 543

Query: 680 LFGLVQLTL-----------------NGCK----------------------NLERLPRT 700
             G+ +L L                   CK                       LE+LP  
Sbjct: 544 FAGMDKLRLLKFYDYSPSTNSECTSKRKCKVHIPRDFKFHYNELRYLHLHGYPLEQLPHD 603

Query: 701 IS-------------------ALKYLSTLNLSGLSKFREFPEIT--SSRDQLLEIHLEG- 738
            S                    +K L  L    LS  +   E    S    L ++ L G 
Sbjct: 604 FSPKNLVDLSLSCSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPNFSGISNLEKLDLTGC 663

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T +R +  ++ +L      +L+DCK LK++P++I  L+SL     SGCSK++N  E  G 
Sbjct: 664 TYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPENFGN 723

Query: 799 VESLE 803
           +E L+
Sbjct: 724 LEQLK 728



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 49/85 (57%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L+  T +RE+   + +L  L  L+L  CK L+ +P +I  LK L T   SG SK   FPE
Sbjct: 660 LTGCTYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPE 719

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASI 748
              + +QL E++ + TAI  LP+SI
Sbjct: 720 NFGNLEQLKELYADETAISALPSSI 744


>gi|399920226|gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
          Length = 2242

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 168/511 (32%), Positives = 248/511 (48%), Gaps = 86/511 (16%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G T++ E+  SI LL  L++   + CK++ SLP  + +++ L T ++
Sbjct: 1796 FTGIPNLGKLVLEGCTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSAV-NMEFLETFDV 1854

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLKK P+ V   + LSKLYLDGT++ ++PSSIE L                     
Sbjct: 1855 SGCSKLKKIPEFVGQTKRLSKLYLDGTAVEKLPSSIEHL--------------------- 1893

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                                       ESL ELD+SG   R    S+F+ +NLR   F  
Sbjct: 1894 --------------------------SESLVELDLSGIVKRDQPFSLFVKQNLRVSSFGL 1927

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                KS  P+  +L SL    SLTKL+L+DC L E  IP+DI  
Sbjct: 1928 -----------------FPRKSPHPLIPVLASLKHFSSLTKLNLNDCNLCEGEIPNDIGT 1970

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRANGCSSL 298
            L SL+ L L  NNFV+LPASI  L  L ++++E+CKRLQ LP++P +   +V  + C+SL
Sbjct: 1971 LSSLEILKLRGNNFVSLPASIHLLSKLTQIDVENCKRLQQLPELPVSRSLWVTTDNCTSL 2030

Query: 299  VTLFGALKLCRSKYTIINCIDSLKLLRKNGLA---ISMLREYLELQAVSDPGHKLSIVFP 355
                    LCR     ++C++   ++     +    S+L+  LE + +    + L +V P
Sbjct: 2031 QVFPDPPDLCRLSAFWVSCVNCSSMVGNQDASYFLYSVLKRLLE-ETLCSFRYYLFLV-P 2088

Query: 356  GSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHEL 415
            GS+IP+WF  Q+ G  +T   PS   N +K +GFA+C +  VP+ +     F   P  + 
Sbjct: 2089 GSEIPEWFNNQSVGDRVTEKLPSDACN-SKWIGFAVCALI-VPQDNPSA--FPENPLLDP 2144

Query: 416  ECSMDGSGEGHYIYFRG---KFGHVVSDHLWLLFLPRHGHNWQFESNL-IRLSF---RSI 468
            +    G    +  Y  G   +    VSDHLWL  L    H W+ E  L +   F   R++
Sbjct: 2145 DTCRIGCHWNNGFYSLGQKFRVRQFVSDHLWLFVL--RSHFWKLEKRLEVNFVFEVTRAV 2202

Query: 469  -SDPTWKVKRCGFHPIYMHEVEEFDETTKQS 498
             S+   KVK+CG   +Y H+ EE      QS
Sbjct: 2203 GSNICIKVKKCGVPALYEHDKEELISKMNQS 2233



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 663  VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
            VL   T++ E+  +I LL  L       CK+++ LP  ++ +++L T ++SG SK ++ P
Sbjct: 1806 VLEGCTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSAVN-MEFLETFDVSGCSKLKKIP 1864

Query: 723  EITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
            E      +L +++L+GTA+  LP+SIE LS +++
Sbjct: 1865 EFVGQTKRLSKLYLDGTAVEKLPSSIEHLSESLV 1898



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)

Query: 693  NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
            N++ L   I +L  L +++LS     R  P  T   + L ++ LEG T +  +  SI LL
Sbjct: 1765 NIDHLWNGIKSLVNLKSIDLSYSRSLRRTPNFTGIPN-LGKLVLEGCTNLVEIHPSIALL 1823

Query: 752  SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                + N ++CK++KSLPS +N +  L     SGCSKLK + E +G+ + L
Sbjct: 1824 KRLKIWNFRNCKSIKSLPSAVN-MEFLETFDVSGCSKLKKIPEFVGQTKRL 1873


>gi|357507537|ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
 gi|355499072|gb|AES80275.1| TMV resistance protein N [Medicago truncatula]
          Length = 1122

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 155/423 (36%), Positives = 224/423 (52%), Gaps = 43/423 (10%)

Query: 1    MASMKDLSDLYLDGTSI-TEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L  L L G SI TEV  S+     + +++LK CK+L SLP  +  +  L+ L L
Sbjct: 652  FSGVPNLEKLILKGCSILTEVHLSLVHHKKVVVVSLKNCKSLKSLPGKLE-MSSLKKLIL 710

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCS+ K  P+    ME+LS L L GT I ++P S+  L GL  L L +CK+LV LP +I
Sbjct: 711  SGCSEFKFLPEFGEKMENLSILALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTI 770

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            +GL SL  LN+SGC +L  +PD L +++ L+EL  + TAI    S IF + NL+ L F+G
Sbjct: 771  HGLNSLIILNISGCSRLCRLPDGLKEIQCLKELHANDTAIDELPSFIFYLDNLKVLSFAG 830

Query: 180  CNEPPA-SASWHLHLPFN-LLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSD 236
            C  PPA S +W    PFN + G  S      LP S   + SL  L+LS C L E +IP+ 
Sbjct: 831  CQGPPAMSTNW---FPFNWMFGGQSASTGFRLPTSFLSLHSLKYLNLSYCNLSEESIPNY 887

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
              +L SLK L L  NNFV +P+SIS L  L  L L  C++LQ LP++P  +  + A+ C 
Sbjct: 888  FHHLSSLKSLDLTGNNFVIIPSSISKLSRLRFLCLNWCEQLQLLPELPSRIMQLDASNCD 947

Query: 297  SLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPG 356
            SL T                        RK       +  +++ + +      + I FPG
Sbjct: 948  SLET------------------------RK----FDPIESFMKGRCLPATRFDMLIPFPG 979

Query: 357  SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
             +IP W + Q   S   V  P+ L   ++ VGFA+C  FQ+  ++    L +    HE++
Sbjct: 980  DEIPSWCVSQGSVSWAKVHIPNNLPQ-DEWVGFALC--FQLVSYTFPPELCN----HEID 1032

Query: 417  CSM 419
            C +
Sbjct: 1033 CYL 1035



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDGTDI-RELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G  I  E+ L++     +V ++L  CK+L+ LP  +  +  L  L LSG S
Sbjct: 656 PNLEKLILKGCSILTEVHLSLVHHKKVVVVSLKNCKSLKSLPGKLE-MSSLKKLILSGCS 714

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           +F+  PE     + L  + L+GT IR LP S+  L G    NLKDCK+L  LP TI+GL 
Sbjct: 715 EFKFLPEFGEKMENLSILALKGTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLN 774

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL ++  SGCS+L  + + L +++ L+
Sbjct: 775 SLIILNISGCSRLCRLPDGLKEIQCLK 801



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 45/82 (54%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GTDIR+L L++  L GL  L L  CK+L  LP TI  L  L  LN+SG S+    P+   
Sbjct: 736 GTDIRKLPLSLGSLVGLTNLNLKDCKSLVCLPDTIHGLNSLIILNISGCSRLCRLPDGLK 795

Query: 727 SRDQLLEIHLEGTAIRGLPASI 748
               L E+H   TAI  LP+ I
Sbjct: 796 EIQCLKELHANDTAIDELPSFI 817



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 111/274 (40%), Gaps = 38/274 (13%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKC-LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSI 88
           L+LL L    N   LP+ +S L C L+ L   GC  LK   Q    ++++  + L  + I
Sbjct: 569 LKLLNL----NEVQLPLGLSCLPCSLKVLRWRGCP-LKTLAQ-TNQLDEVVDIKLSHSKI 622

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            ++   +  +  L+ L L   KNL RLP   +G+ +L+ L L GC  L  V  +L   + 
Sbjct: 623 EKLWHGVYFMEKLKYLNLKFSKNLKRLP-DFSGVPNLEKLILKGCSILTEVHLSLVHHKK 681

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCP 204
           +  + +      +       M +L+ L  SGC+E    P             L G     
Sbjct: 682 VVVVSLKNCKSLKSLPGKLEMSSLKKLILSGCSEFKFLPEFGEKMENLSILALKGTDIRK 741

Query: 205 VALMLPSLTGVCSLTKLDLSDC-----------GLGEAAI------------PSDIDNLH 241
           + L L SL G   LT L+L DC           GL    I            P  +  + 
Sbjct: 742 LPLSLGSLVG---LTNLNLKDCKSLVCLPDTIHGLNSLIILNISGCSRLCRLPDGLKEIQ 798

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            LKEL+ N      LP+ I  L NL+ L    C+
Sbjct: 799 CLKELHANDTAIDELPSFIFYLDNLKVLSFAGCQ 832



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 57/237 (24%)

Query: 623 GCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEAD------------EFPDIV--------- 661
           G     ++ GR  V ++SP +PG CSRLW + D            +   +V         
Sbjct: 497 GMHDLLQEMGRNIVFQESPNDPGRCSRLWSKEDIDSVLTKNKGTEKISSVVLNLLQPYEA 556

Query: 662 ----QVLSDGTDIRELSL-AIELLFGLV-------QLTLNGC------------------ 691
               +  S  + ++ L+L  ++L  GL         L   GC                  
Sbjct: 557 RWSTEAFSKTSQLKLLNLNEVQLPLGLSCLPCSLKVLRWRGCPLKTLAQTNQLDEVVDIK 616

Query: 692 ---KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI-RGLPAS 747
                +E+L   +  ++ L  LNL      +  P+  S    L ++ L+G +I   +  S
Sbjct: 617 LSHSKIEKLWHGVYFMEKLKYLNLKFSKNLKRLPDF-SGVPNLEKLILKGCSILTEVHLS 675

Query: 748 IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +      ++ +LK+CK+LKSLP  +  + SL+ +  SGCS+ K + E   K+E+L +
Sbjct: 676 LVHHKKVVVVSLKNCKSLKSLPGKLE-MSSLKKLILSGCSEFKFLPEFGEKMENLSI 731


>gi|408537080|gb|AFU75193.1| nematode resistance-like protein, partial [Solanum bukasovii f.
           multidissectum]
          Length = 307

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/288 (46%), Positives = 192/288 (66%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI++  SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L DC RL+SLP++PP+++ + ANGC+SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 290



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L    T+I ++PSS+ LL  L+ L L  C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
                   +++GL SL  L+LS C   +  +   LG + SLE L ++G      P +SI 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFSNIPDASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  L+ L    C
Sbjct: 251 RLTRLKCLKLHDC 263



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 24/204 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L E+    TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S CS     +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSNIPDASISRLTRL 255



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 81/181 (44%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L  LNL  C  L+ +P  + ++E LE L ++G +
Sbjct: 1   PNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRI-RLEKLEILVLTGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY    +     AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  LD+S C      +P D+  L  L+EL         +P+S+S L NL+ L L  C  
Sbjct: 120 CLKTLDVSGCS-KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|408537088|gb|AFU75197.1| nematode resistance-like protein, partial [Solanum vernei]
          Length = 307

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/288 (47%), Positives = 192/288 (66%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLXTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L DC RL+SLP++PP+++ + ANGC+SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKRITANGCTSLMSI 290



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL  LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLXTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L+ C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
                   +++GL SL  L+LS C   +  +   LG + SLE L ++G      P +SI 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFSNIPDASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  L+ L    C
Sbjct: 251 RLTRLKCLKLHDC 263



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 24/204 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L  C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLSGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S CS     +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSNIPDASISRLTRL 255


>gi|296081089|emb|CBI18283.3| unnamed protein product [Vitis vinifera]
          Length = 1183

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 165/487 (33%), Positives = 237/487 (48%), Gaps = 92/487 (18%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + E+P  IE  + L+ L L+ CK L SLP +I   K L TL  SGCS+L+ FP+I+  
Sbjct: 772  SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 830

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M    KL LDGT+I E+PSSI+ L GL+ L L  C+NLV LP SI  L SL+TL +  C 
Sbjct: 831  MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 890

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KL  +P+ LG+++SLE L V               K+L S+                   
Sbjct: 891  KLNKLPENLGRLQSLEYLYV---------------KDLDSM------------------- 916

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                   +C     LPSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N F 
Sbjct: 917  -------NC----QLPSLSGLCSLITLQLINCGLRE--IPSGIWHLSSLQHLSLRGNRFS 963

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
            ++P  I+ L NL   +L  C+ LQ +P++P +L+++ A+ CSSL  L     L  S  ++
Sbjct: 964  SIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWS--SL 1021

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSIT 373
              C              S ++E+       +   K+ +  PGS  IP W  +Q  GS IT
Sbjct: 1022 FKCFK------------SRIQEF-------EVNFKVQMFIPGSNGIPGWISHQKNGSKIT 1062

Query: 374  VTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY--FR 431
            +  P Y Y  +  +GFA+C +  VP       L         +C ++ +     +   F 
Sbjct: 1063 MRLPRYWYENDDFLGFALCSL-HVP-------LDIEEENRSFKCKLNFNNRAFLLVDDFW 1114

Query: 432  GK------FGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSIS-----DPTWKVKRCGF 480
             K           S+ +WL++ P+     ++ SN  R    S S     +P  KV+RCGF
Sbjct: 1115 SKRNCERCLHGDESNQVWLIYYPKSKIPKKYHSNEYRTLNTSFSEYFGTEPV-KVERCGF 1173

Query: 481  HPIYMHE 487
            H IY  E
Sbjct: 1174 HFIYAQE 1180



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 136/266 (51%), Gaps = 37/266 (13%)

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L+  P+  G +  L ELD+SGTAI+   SS+F  ++L++L                 L F
Sbjct: 366 LKRFPEIKGNMRKLRELDLSGTAIKVLPSSLF--EHLKALEI---------------LSF 408

Query: 196 NLLGK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
            +  K +  P+ +   S     SL  LDLS C + E  IPSDI +L SLKEL L  N+F 
Sbjct: 409 RMSSKLNKIPIDICCLS-----SLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFR 463

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
           ++PA+I+ L  L+ L L  C+ LQ +P++P +L+ + A+G +   +    L +    +++
Sbjct: 464 SIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSNPTSSRASFLPV----HSL 519

Query: 315 INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK-LSIVFPGSQ-IPKWFMYQNEGSSI 372
           +NC +S        L  S   E     +VS  G K + IV PGS  +P+W M   +   I
Sbjct: 520 VNCFNS----EIQDLNCSSRNEVWSENSVSTYGSKGICIVLPGSSGVPEWIM---DDQGI 572

Query: 373 TVTRPSYLYNVNKVVGFAICCVFQVP 398
               P      N+ +GFA+CCV+ VP
Sbjct: 573 ATELPQNWNQNNEFLGFALCCVY-VP 597



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           +D++EL + IE    L  L L  CK L+ LP +I   K L+TL+ SG S+   FPEI   
Sbjct: 772 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 830

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                ++ L+GTAI+ +P+SI+ L G    NL  C+NL +LP +I  L SLR +    C 
Sbjct: 831 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 890

Query: 788 KLKNVTETLGKVESLE 803
           KL  + E LG+++SLE
Sbjct: 891 KLNKLPENLGRLQSLE 906



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 25/191 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M     L LDGT+I E+PSSI+ L GL+ L L  C+NL +LP +I +L  LRTL + 
Sbjct: 828  LEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVV 887

Query: 61   GCSKLKKFPQIVASMEDLSKLY------------------------LDGTSIAEVPSSIE 96
             C KL K P+ +  ++ L  LY                        L    + E+PS I 
Sbjct: 888  SCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIW 947

Query: 97   LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             L  L+ L L        +P  IN L +L   +LS C  L+++P+    +E L+    S 
Sbjct: 948  HLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSS 1006

Query: 157  TAIRRPTSSIF 167
              I    S++ 
Sbjct: 1007 LEILSSPSTLL 1017



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +M+ L +L L GT+I  +PSS+ E L  LE+L+ +    L+ +P+ I  L  L  L+LS
Sbjct: 374 GNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLS 433

Query: 61  GCSKLKK-FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+ ++   P  +  +  L +L L       +P++I  L  L++L L+ C+NL  +P   
Sbjct: 434 HCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELP 493

Query: 120 NGLKSL 125
           + L+ L
Sbjct: 494 SSLRLL 499



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLK 123
           LK+FP+I  +M  L +L L GT+I  +PSS+ E L  LE+L       L ++P  I  L 
Sbjct: 366 LKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLS 425

Query: 124 SLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           SL+ L+LS C  +E  +P  +  + SL+EL++     R   ++I  +  L+ L  S C
Sbjct: 426 SLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHC 483



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 36/220 (16%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           ++ GR+ +R++ P++ G  SR+W+      D   VL+     R    AIE LF      L
Sbjct: 285 QQMGREIIRQECPEDLGRRSRVWDS-----DAYHVLTRNMGTR----AIEGLF------L 329

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSK--------FREFPEITSSRDQLLEIHLEGTA 740
           + CK  + +     + K +  L L  + K         + FPEI  +  +L E+ L GTA
Sbjct: 330 DICK-FDPIQFAKESFKQMDRLRLLKIHKGDEYDLISLKRFPEIKGNMRKLRELDLSGTA 388

Query: 741 IRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           I+ LP+S+ E L    + + +    L  +P  I  L SL ++  S C    N+ E  G +
Sbjct: 389 IKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHC----NIME--GGI 442

Query: 800 ESLEVRLSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELL 838
            S    LSS     ++ NDF    +S   T+ +L++ ++L
Sbjct: 443 PSDICHLSSLKELNLKSNDF----RSIPATINQLSRLQVL 478



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 36/193 (18%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I++ +        DGT I+E+  +I+ L GL  L L  C+NL  LP 
Sbjct: 818  CSQL----ESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPE 873

Query: 700  TISALKYLSTLNLSGLSKFREFPE---------------ITSSRDQ---------LLEIH 735
            +I  L  L TL +    K  + PE               + S   Q         L+ + 
Sbjct: 874  SICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQ 933

Query: 736  LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            L    +R +P+ I  LS     +L+      S+P  IN L +L +   S C  L+++ E 
Sbjct: 934  LINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQHIPEL 992

Query: 796  LGKVESLEVRLSS 808
               +E L+    S
Sbjct: 993  PSSLEYLDAHQCS 1005



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 25/228 (10%)

Query: 560 GQSLLNRGTVEDLWYNSRAYD------VFDDMPTKE-RASHLMCCINSMVSQAKAISQQG 612
           G+ ++ +   EDL   SR +D      +  +M T+      L  C    +  AK   +Q 
Sbjct: 288 GREIIRQECPEDLGRRSRVWDSDAYHVLTRNMGTRAIEGLFLDICKFDPIQFAKESFKQM 347

Query: 613 QFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRE 672
             ++++ +  G      ++   +++R  P+  GN  +L E          +   GT I+ 
Sbjct: 348 DRLRLLKIHKG-----DEYDLISLKR-FPEIKGNMRKLRE----------LDLSGTAIKV 391

Query: 673 L-SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE-FPEITSSRDQ 730
           L S   E L  L  L+      L ++P  I  L  L  L+LS  +      P        
Sbjct: 392 LPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSS 451

Query: 731 LLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           L E++L+    R +PA+I  LS   + NL  C+NL+ +P   + LR L
Sbjct: 452 LKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLL 499


>gi|408537074|gb|AFU75190.1| nematode resistance-like protein, partial [Solanum stoloniferum]
          Length = 307

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/288 (45%), Positives = 189/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL ++P  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILILSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+P+S+E   G+ ++ L+ CK+L  LPSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ LY  GC    +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCTALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL +LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIRLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPAASISHLTRLKRLKLHSCGRLESLPELPPSIKVIHANECTSLMSI 290



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ +P+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILILSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  LPAS+E  SG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 31/214 (14%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+P+S+E  +G+ ++ L  CK+L SLP +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ LYL  C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCTALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SLE L ++G      P 
Sbjct: 191 KSMGVNFQNLSGLCSLIRLDLSDC----NISDGGILSNLGFLPSLEILILNGNNFSNIPA 246

Query: 164 SSIFLMKNLRSLYFSGCNE-------PPASASWH 190
           +SI  +  L+ L    C         PP+    H
Sbjct: 247 ASISHLTRLKRLKLHSCGRLESLPELPPSIKVIH 280



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 24/209 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + EL  ++E   G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL       L+ C 
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCT 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL  +  S C+     +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCNISDGGILSNLGFLPSLEILILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
                  N+F  +  +++  +T+L + +L
Sbjct: 238 G------NNFSNIPAASISHLTRLKRLKL 260



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 82/181 (45%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L  LNL  C  L+ +P  + ++E LE L +SG +
Sbjct: 1   PNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTIPKRI-RLEKLEILILSGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY          AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  L++S C      +P D+  L  L+EL+       T+P+S+S L NL+ L L  C  
Sbjct: 120 CLKTLNVSGCS-KLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCTA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|399920205|gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 177/540 (32%), Positives = 274/540 (50%), Gaps = 53/540 (9%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L   I  L  L++++LS    L + P     + +L KL L+G T++ ++  SI LL
Sbjct: 616  NIDHLWNGIKYLGKLKSIDLSYSINLTRTPDFTG-ISNLEKLILEGCTNLVKIHPSIALL 674

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L++     CK++ RLPS +N ++ L+T ++SGC KL+ +P+ +G+++ L +L + GTA
Sbjct: 675  KRLKIWNFRNCKSIKRLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQMKRLSKLRLGGTA 733

Query: 159  IRRPTSSI-FLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPS 211
            + +  SSI    ++L  L  SG    E P S     +L  + LG    KS  P+  +L S
Sbjct: 734  VEKLPSSIERWSESLVELDLSGIVIREQPYSRFLKQNLIASSLGLFPRKSPHPLIPLLAS 793

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L    SLT+L L+DC L E  IP+DI +L SL+ L L  NNFV+LPASI  L  LE + +
Sbjct: 794  LKHFSSLTELKLNDCNLFEGDIPNDIGSLSSLRSLGLRGNNFVSLPASIHLLSKLEYINV 853

Query: 272  EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI-INCIDSLKLL---RKN 327
            E+CKRLQ LP++       R + C++L        LCR      +NC++ L ++     +
Sbjct: 854  ENCKRLQQLPELSAIGVLSRTDNCTALQLFPDPPDLCRITTNFSLNCVNCLSMVCNQDAS 913

Query: 328  GLAISMLREYLELQAVS-------------DPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
                ++L+ ++E+Q +S              P   L +V PGS+IP+WF  Q+ G S+T 
Sbjct: 914  YFLYAVLKRWIEIQVLSRCDMTVHMQKTHRHPSEYLKVVIPGSEIPEWFNNQSVGDSVTE 973

Query: 375  TRPSYLYNVNKVVGFAICCVF----------QVPKHSTGTYLFHSYPAHELECSMDGSGE 424
              PS   N +K +GFA+C +           +VP     T     Y ++ +  +  G G 
Sbjct: 974  KFPSDACNYSKWIGFAVCALIVPQDNPSAVPEVPHLDPDTCQILCYWSNFVTDTNLG-GV 1032

Query: 425  GHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSF-----RSI-SDPTWKVKRC 478
            G Y+         VSDHLWLL L R     +   N + ++F     R++ ++   KVK+C
Sbjct: 1033 GDYV------KQFVSDHLWLLVLRR---PLRIPENCLEVNFVFEIRRAVGNNRCMKVKKC 1083

Query: 479  GFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSSQWKWLKPVE 538
            G   +Y H+ EE      QS   +S +L E   D     M  A  SGSG S  ++    E
Sbjct: 1084 GVRALYEHDREELISKMNQSKSSSSISLYEEAMDEQEGAMVKATPSGSGGSDDEYYSAAE 1143



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L   T++ ++  +I LL  L       CK+++RLP  ++ +++L T ++SG SK +  P
Sbjct: 657 ILEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKRLPSEVN-MEFLETFDVSGCSKLKMIP 715

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           E      +L ++ L GTA+  LP+SIE  S +++
Sbjct: 716 EFVGQMKRLSKLRLGGTAVEKLPSSIERWSESLV 749



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I  L  L +++LS        P+ T   + L ++ LEG T +  +  SI LL
Sbjct: 616 NIDHLWNGIKYLGKLKSIDLSYSINLTRTPDFTGISN-LEKLILEGCTNLVKIHPSIALL 674

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWN 810
               + N ++CK++K LPS +N +  L     SGCSKLK + E +G+++ L ++RL    
Sbjct: 675 KRLKIWNFRNCKSIKRLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQMKRLSKLRLGGTA 733

Query: 811 RPKMQNDFDCVEQSAVE 827
             K+ +  +   +S VE
Sbjct: 734 VEKLPSSIERWSESLVE 750


>gi|408537076|gb|AFU75191.1| nematode resistance-like protein, partial [Solanum hougasii]
          Length = 307

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 135/288 (46%), Positives = 191/288 (66%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYLD TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPAASISRLTRLKRLKLHSCGRLESLPELPPSIKGIYANECTSLMSI 290



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 87/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L+ T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 24/197 (12%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYLD TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L+ C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SLE L ++G      P 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDC----NISDGGILSNLGFLPSLEILILNGNNFSNIPA 246

Query: 164 SSIFLMKNLRSLYFSGC 180
           +SI  +  L+ L    C
Sbjct: 247 ASISRLTRLKRLKLHSC 263



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 32/213 (15%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++       D T + EL  ++E L G+  + L+ CK+LE LP 
Sbjct: 58  CSKLRT----FPEIEEKMNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPS 113

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL++SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L
Sbjct: 114 SIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSL 173

Query: 760 KDCKNL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEV 804
             C  L           KS+      ++GL SL M+  S C+     +   LG + SLE+
Sbjct: 174 SGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEI 233

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
            + +       N+F  +  +++  +T+L + +L
Sbjct: 234 LILNG------NNFSNIPAASISRLTRLKRLKL 260



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 83/181 (45%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L  LNL  C  L+ +P  + ++E LE L ++G +
Sbjct: 1   PNLERLVLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRI-RLEKLEILVLTGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY    +     AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNCLAELYLDATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  LD+S C      +P D+  L  L+EL+       T+P+S+S L NL+ L L  C  
Sbjct: 120 CLKTLDVSGCS-KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSLSGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|147792369|emb|CAN74711.1| hypothetical protein VITISV_009242 [Vitis vinifera]
          Length = 1354

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 165/491 (33%), Positives = 234/491 (47%), Gaps = 90/491 (18%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP  +E    L+ L L+ CKNL+SLP +I   K L  L  SGCS+L+ FP+IV 
Sbjct: 934  GSDMNEVPI-MENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 992

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KLYLDGT+I E+PSSI+ L GL+ L+L++CKNLV LP SI  L S KTL +S C
Sbjct: 993  DMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 1052

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
                 +PD LG+++SLE L                +  L S+ F                
Sbjct: 1053 PNFNKLPDNLGRLQSLEHL---------------FIGYLDSMNF---------------- 1081

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                           LPSL+G+CSL  L L  C L E  IPS+I  L SL  LYL  N+F
Sbjct: 1082 --------------QLPSLSGLCSLRILMLQACNLRE--IPSEIYYLSSLVTLYLMGNHF 1125

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
              +P  IS L NL+  +L  CK LQ +P++P  L ++ A+ C+SL  L           +
Sbjct: 1126 SRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYLDAHHCTSLENLSSQSS--LLWSS 1183

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSI 372
            +  C  S                  ++Q V + G  +    P S  IP+W  +Q  G  I
Sbjct: 1184 LFKCFKS------------------QIQGV-EVGAIVQTFIPQSNGIPEWISHQKSGFQI 1224

Query: 373  TVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEG-----HY 427
            T+  P   Y  +  +GF +C +  VP   T T    S+      C ++   +        
Sbjct: 1225 TMELPWSWYENDDFLGFVLCSL-HVP-FDTDTAKHRSF-----NCKLNFDHDSASFLLDV 1277

Query: 428  IYFRGK----FGHVVSDHLWLLFLPRHGHNWQFESN---LIRLSFRS-ISDPTWKVKRCG 479
            I F+      +    S+  WL++  +     ++ SN    ++ SF    S+   KV+RCG
Sbjct: 1278 IRFKQSCECCYDEDESNQGWLIYYSKSNIPKKYHSNEWRTLKASFYGHSSNRPGKVERCG 1337

Query: 480  FHPIYMHEVEE 490
            FH +Y H+ E 
Sbjct: 1338 FHFLYAHDYEH 1348



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 34/238 (14%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL  LP  I  LK L+TL+ +GC KLE  P+  G +  L  LD+SGT
Sbjct: 542 VPNLEILTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSGT 601

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH-LPFNLLGKSSCPVALMLPSLTGVC 216
           AI    SSI  +  L++L    C++        LH +P ++   SS  V           
Sbjct: 602 AIMDLPSSISHLNGLQTLLLEDCSK--------LHKIPIHICHLSSLEV----------- 642

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
               LDL +C + E  IPSDI +L SL++L L   +F  +PA+I+ L  L+ L L  C  
Sbjct: 643 ----LDLGNCNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNN 698

Query: 277 LQSLPQIPPNLQFVRANG--CSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAIS 332
           L+ +P++P +L+ + A+G  C+S    F  L      ++++NC    K  R++G  ++
Sbjct: 699 LEQIPELPSSLRLLDAHGSNCTSSRAPFLPL------HSLVNCFSWTK--RRDGYLVT 748



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 1/153 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+LTL+GC NL  LP  I  LK L+TL  +GCSKL++FP+I  +M  L  L L GT+I 
Sbjct: 545 LEILTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSGTAIM 604

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVES 148
           ++PSSI  L GL+ L L +C  L ++P  I  L SL+ L+L  C  +E  +P  +  + S
Sbjct: 605 DLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNCNIMEGGIPSDICHLSS 664

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L++L++ G       ++I  +  L++L  S CN
Sbjct: 665 LQKLNLEGGHFSCIPATINQLSRLKALNLSHCN 697



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ + +E    L  L L  CKNL  LP +I   K L+ L+ SG S+   FPEI  
Sbjct: 934  GSDMNEVPI-MENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 992

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L++++L+GTAIR +P+SI+ L G     L  CKNL +LP +I  L S + +  S C
Sbjct: 993  DMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 1052

Query: 787  SKLKNVTETLGKVESLE 803
                 + + LG+++SLE
Sbjct: 1053 PNFNKLPDNLGRLQSLE 1069



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 7/158 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  LYLDGT+I E+PSSI+ L GL+ L L  CKNL +LP +I +L   +TL +S
Sbjct: 991  VQDMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVS 1050

Query: 61   GCSKLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             C    K P  +  ++ L  L   YLD  +  ++P S+  L  L +L L  C NL  +PS
Sbjct: 1051 RCPNFNKLPDNLGRLQSLEHLFIGYLDSMNF-QLP-SLSGLCSLRILMLQAC-NLREIPS 1107

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
             I  L SL TL L G      +PD + ++ +L+  D+S
Sbjct: 1108 EIYYLSSLVTLYLMG-NHFSRIPDGISQLYNLKHFDLS 1144



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 11/154 (7%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLE LPR I  LK+L TL+ +G SK   FPEI  +  +L  + L GTAI  LP
Sbjct: 548 LTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSGTAIMDLP 607

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
           +SI  L+G     L+DC  L  +P  I  L SL ++    C    N+ E  G + S    
Sbjct: 608 SSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNC----NIME--GGIPSDICH 661

Query: 806 LSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELL 838
           LSS  +  ++   F C+      T+ +L++ + L
Sbjct: 662 LSSLQKLNLEGGHFSCIPA----TINQLSRLKAL 691



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 1/125 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M  L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 588 GNMGKLRVLDLSGTAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGN 647

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           C+ ++   P  +  +  L KL L+G   + +P++I  L  L+ L L+ C NL ++P   +
Sbjct: 648 CNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIPELPS 707

Query: 121 GLKSL 125
            L+ L
Sbjct: 708 SLRLL 712



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 81/165 (49%), Gaps = 26/165 (15%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+IVQ +        DGT IRE+  +I+ L GL  L L+ CKNL  LP 
Sbjct: 981  CSQL----ESFPEIVQDMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPE 1036

Query: 700  TISALKYLSTLNLSGLSKFREFPE---ITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
            +I  L    TL +S    F + P+      S + L   +L+    + LP+   L S  IL
Sbjct: 1037 SICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFIGYLDSMNFQ-LPSLSGLCSLRIL 1095

Query: 757  SNLKDCKNLKSLPSTINGLRSLRMMY---------PSGCSKLKNV 792
              L+ C NL+ +PS I  L SL  +Y         P G S+L N+
Sbjct: 1096 M-LQAC-NLREIPSEIYYLSSLVTLYLMGNHFSRIPDGISQLYNL 1138



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 647 CSRLWEEADEFPDI------VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I      ++VL   GT I +L  +I  L GL  L L  C  L ++P 
Sbjct: 577 CSKL----ERFPEIKGNMGKLRVLDLSGTAIMDLPSSISHLNGLQTLLLEDCSKLHKIPI 632

Query: 700 TISALKYLSTLNLSGLSKFRE-FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
            I  L  L  L+L   +      P        L +++LEG     +PA+I  LS     N
Sbjct: 633 HICHLSSLEVLDLGNCNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALN 692

Query: 759 LKDCKNLKSLPSTINGLRSL 778
           L  C NL+ +P   + LR L
Sbjct: 693 LSHCNNLEQIPELPSSLRLL 712


>gi|147856100|emb|CAN82453.1| hypothetical protein VITISV_003327 [Vitis vinifera]
          Length = 762

 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 163/510 (31%), Positives = 253/510 (49%), Gaps = 53/510 (10%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +M+ L  LYLDGT+I E+PSSI+ L+ L     + CKNL SLP +I  LK L+ L  + C
Sbjct: 189 NMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNC 248

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           SKL  FP+++ +M +L +L+L GT+I ++PSSIE L GLE L L  CK LV LP+ I  L
Sbjct: 249 SKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNL 308

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN 181
           KSLKTL++ GC KL  +P +LG ++ LE LD     +I  P  S   + +LR L+ +G  
Sbjct: 309 KSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLCSLRILHLNG-- 366

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                         NL+  S      +   +  + SL  LDL++C L +     +I +L 
Sbjct: 367 -------------LNLMQWS------IQDDICRLYSLEVLDLTNCNLIDDGTADEIFHLS 407

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           SL+ L L+RN+   +PA IS L  L+ L    C+    +P++P +L+ +  + C+ L+TL
Sbjct: 408 SLQVLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITL 467

Query: 302 FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP-----------GHKL 350
                L  +  ++  C  S   ++   L  + +++        DP           G  +
Sbjct: 468 SNPSSLFWA--SLFKCFKS--AIQAWNLHATFVQDLECGNHCYDPSPEAWPDFCYFGQGI 523

Query: 351 SIVFP-GSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP--KHSTGTYLF 407
           SI+ P  S IP+W  +Q  GS +T   P Y Y    ++GFA+  V  +P    S      
Sbjct: 524 SILIPRSSGIPEWIRHQKNGSRVTTELPRYWYKNKDLLGFALFSV-HIPLDNESVDISED 582

Query: 408 HSYPAHELECSMDGSGEGHYI--------YFRGKFGHVVSDHLWLLFLPRHGHNWQFESN 459
              P   L+C +   G+            +         S  +W+L+ P+     ++ SN
Sbjct: 583 EDLPCCSLKCELTFRGDQFAFLDDLSLDSWCECYKNDGASGQVWVLYYPKVAIKEKYHSN 642

Query: 460 ---LIRLSFRSISDPT-WKVKRCGFHPIYM 485
               ++ SF    + T  KV++CG   IY+
Sbjct: 643 KWRRLKASFHCYLNGTPVKVEKCGMQLIYV 672



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/138 (44%), Positives = 87/138 (63%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT I+E+  +I+ L  LV+     CKNLE LPR+I  LKYL  L  +  SK   FPE+ 
Sbjct: 199 DGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCSKLGSFPEVM 258

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            + + L E+HL GTAI+ LP+SIE L G    +L  CK L +LP+ I  L+SL+ ++  G
Sbjct: 259 ENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVYG 318

Query: 786 CSKLKNVTETLGKVESLE 803
           CSKL  + ++LG ++ LE
Sbjct: 319 CSKLNKLPKSLGSLQCLE 336



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 9/186 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M +M +L +L+L GT+I ++PSSIE L GLE L L  CK L +LP  I +LK L+TL + 
Sbjct: 258 MENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVY 317

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG---TSIAEVPSSIELLPGLELLYLNECKNLVR--L 115
           GCSKL K P+ + S++ L   +LD     SIA    S   L  L +L+LN   NL++  +
Sbjct: 318 GCSKLNKLPKSLGSLQCLE--HLDAGCLGSIAPPLPSFSGLCSLRILHLNGL-NLMQWSI 374

Query: 116 PSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
              I  L SL+ L+L+ C  +++   D +  + SL+ L +S   I +  + I  +  L+ 
Sbjct: 375 QDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLSRNHISKIPAGISQLSKLQV 434

Query: 175 LYFSGC 180
           L FS C
Sbjct: 435 LGFSHC 440



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 49/72 (68%)

Query: 731 LLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           L +++L+GTAI+ +P+SI+ LS  +    ++CKNL+SLP +I  L+ L+++  + CSKL 
Sbjct: 193 LQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCSKLG 252

Query: 791 NVTETLGKVESL 802
           +  E +  + +L
Sbjct: 253 SFPEVMENMNNL 264


>gi|359477825|ref|XP_002282820.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1292

 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/488 (33%), Positives = 233/488 (47%), Gaps = 90/488 (18%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP  +E    L+ L L+ CKNL+SLP +I   K L  L  SGCS+L+ FP+IV 
Sbjct: 881  GSDMNEVPI-MENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 939

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KLYLDGT+I E+PSSI+ L GL+ L+L++CKNLV LP SI  L S KTL +S C
Sbjct: 940  DMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 999

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
                 +PD LG+++SLE L V                     Y    N            
Sbjct: 1000 PNFNKLPDNLGRLQSLEHLFVG--------------------YLDSMN------------ 1027

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                           LPSL+G+CSL  L L  C L E   PS+I  L SL  LYL  N+F
Sbjct: 1028 -------------FQLPSLSGLCSLRILMLQACNLRE--FPSEIYYLSSLVMLYLGGNHF 1072

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
              +P  IS L NL+  +L  CK LQ +P++P  L ++ A+ C+SL  L  + +      +
Sbjct: 1073 SRIPDGISQLYNLKHFDLSHCKMLQHIPELPSGLTYLDAHHCTSLENL--SSQSSLLWSS 1130

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSI 372
            +  C+ S                  ++Q V + G  +    P S  IP+W  +Q  G  I
Sbjct: 1131 LFKCLKS------------------QIQGV-EVGAIVQTFIPESNGIPEWISHQKSGFQI 1171

Query: 373  TVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEG-----HY 427
            T+  P   Y  +  +GF +C +  VP   T T    S+      C ++   +        
Sbjct: 1172 TMELPWSWYENDDFLGFVLCSL-HVPL-DTETAKHRSF-----NCKLNFDHDSASFLLDV 1224

Query: 428  IYFRGK----FGHVVSDHLWLLFLPRHGHNWQFESN---LIRLSFRS-ISDPTWKVKRCG 479
            I F+      +    S+  WL++  +     ++ SN    ++ SF    S+   KV+RCG
Sbjct: 1225 IRFKQSCECCYDEDESNQGWLIYYSKSNIPKKYHSNEWRTLKASFYGHSSNKPGKVERCG 1284

Query: 480  FHPIYMHE 487
            FH +Y H+
Sbjct: 1285 FHFLYAHD 1292



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ + +E    L  L L  CKNL  LP +I   K L+ L+ SG S+   FPEI  
Sbjct: 881  GSDMNEVPI-MENPLELDSLCLRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPEIVQ 939

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              ++L +++L+GTAIR +P+SI+ L G     L  CKNL +LP +I  L S + +  S C
Sbjct: 940  DMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVSRC 999

Query: 787  SKLKNVTETLGKVESLE 803
                 + + LG+++SLE
Sbjct: 1000 PNFNKLPDNLGRLQSLE 1016



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 7/158 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  LYLDGT+I E+PSSI+ L GL+ L L  CKNL +LP +I +L   +TL +S
Sbjct: 938  VQDMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESICNLTSFKTLVVS 997

Query: 61   GCSKLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             C    K P  +  ++ L  L   YLD  +  ++P S+  L  L +L L  C NL   PS
Sbjct: 998  RCPNFNKLPDNLGRLQSLEHLFVGYLDSMNF-QLP-SLSGLCSLRILMLQAC-NLREFPS 1054

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
             I  L SL  L L G      +PD + ++ +L+  D+S
Sbjct: 1055 EIYYLSSLVMLYLGG-NHFSRIPDGISQLYNLKHFDLS 1091



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 26/165 (15%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+IVQ +        DGT IRE+  +I+ L GL  L L+ CKNL  LP 
Sbjct: 928  CSQL----ESFPEIVQDMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPE 983

Query: 700  TISALKYLSTLNLSGLSKFREFPE---ITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
            +I  L    TL +S    F + P+      S + L   +L+    + LP+   L S  IL
Sbjct: 984  SICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFVGYLDSMNFQ-LPSLSGLCSLRIL 1042

Query: 757  SNLKDCKNLKSLPSTINGLRSLRMMY---------PSGCSKLKNV 792
              L+ C NL+  PS I  L SL M+Y         P G S+L N+
Sbjct: 1043 M-LQAC-NLREFPSEIYYLSSLVMLYLGGNHFSRIPDGISQLYNL 1085


>gi|224145030|ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1435

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 169/509 (33%), Positives = 241/509 (47%), Gaps = 56/509 (11%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            LYL+GT+I E+PSSI  L  L  L L GC  L +LP  +S L CL  L+LSGCS + +FP
Sbjct: 804  LYLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVSKLGCLEKLDLSGCSSITEFP 863

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            ++     ++ +LYLDGT+I E+PSSIE L  L  L+L  CK    LPSSI  LK L+ LN
Sbjct: 864  KV---SRNIRELYLDGTAIREIPSSIECLCELNELHLRNCKQFEILPSSICKLKKLRRLN 920

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            LSGC +  + P+ L  +  L  L +  T I +  S I  +K L  L    C         
Sbjct: 921  LSGCLQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNC--------- 971

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGV---CSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                    L    C V L L     V   C L KL+L  C L E  +P  +  L SL+ L
Sbjct: 972  ------KYLEDIHCFVGLQLSKRHRVDLDC-LRKLNLDGCSLSE--VPDSLGLLSSLEVL 1022

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG--- 303
             L+ NN  T+P SI+ L  L+ L L +CKRLQSLP++PP L  +  + C SL  L     
Sbjct: 1023 DLSGNNLRTIPISINKLFELQYLGLRNCKRLQSLPELPPRLSKLDVDNCQSLNYLVSRSS 1082

Query: 304  -ALKLCRSKYTIINCID---SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
              ++    ++   NC+      ++L  + L   +  + L  Q    P    S   PG   
Sbjct: 1083 TVVEGNIFEFIFTNCLRLPVVNQILEYSLLKFQLYTKRLYHQLPDVPEGACSFCLPGDVT 1142

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV--FQVPKHSTGTY-LFHSYPAHELE 416
            P+WF +Q+ GS  T    S+  N ++ +GF++C V  F+   HS      +H    H   
Sbjct: 1143 PEWFSHQSWGSIATFQLSSHWVN-SEFLGFSLCAVIAFRSISHSLQVKCTYHFRNEH--- 1198

Query: 417  CSMDGSGEGHYIYFRGKFG--HVVSDHLWLLFLP--RHGHNWQF-ESNLIRLSFRSISDP 471
                G     Y Y  G +    + S H+++ F P      ++ F E + + + F+ + D 
Sbjct: 1199 ----GDSHDRYCYLYGWYDEKRIDSAHIFVGFDPCLVAKEDYMFSEYSEVSIEFQ-VEDM 1253

Query: 472  TW--------KVKRCGFHPIYMHEVEEFD 492
                      +V  CG   +Y  E   FD
Sbjct: 1254 NGNLLPIDLCQVHECGVRVLYEDEKHRFD 1282



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 128/283 (45%), Gaps = 43/283 (15%)

Query: 30  LELLTLKGCKNLSSLPVTISSLK-----------------------CLRTLELSGCSKLK 66
           LE L L+ CK+L   P +I  L                        CL TL LSGC+ LK
Sbjct: 665 LERLNLQFCKSLVKFPSSIQHLDKLVDLDLRGCKRLINLPSRINSSCLETLNLSGCANLK 724

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
           K P+       L+ L L+ T++ E+P SI  L GL  L L  CK ++ LP +I  LKSL 
Sbjct: 725 KCPETAGK---LTYLNLNETAVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLL 781

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
            +++SGC  +   PD    +  L    ++GTAI    SSI  ++ L  L   GCN     
Sbjct: 782 IVDISGCSSISRFPDFSWNIRYLY---LNGTAIEELPSSIGGLRELIYLDLVGCNRLK-- 836

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL-----DLSDCGLGEAAIPSDIDNLH 241
                +LP + + K  C   L L   + +    K+     +L   G     IPS I+ L 
Sbjct: 837 -----NLP-SAVSKLGCLEKLDLSGCSSITEFPKVSRNIRELYLDGTAIREIPSSIECLC 890

Query: 242 SLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
            L EL+L N   F  LP+SI  L  L  L L  C + +  P++
Sbjct: 891 ELNELHLRNCKQFEILPSSICKLKKLRRLNLSGCLQFRDFPEV 933



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 7/144 (4%)

Query: 657 FPD----IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL 712
           FPD    I  +  +GT I EL  +I  L  L+ L L GC  L+ LP  +S L  L  L+L
Sbjct: 794 FPDFSWNIRYLYLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVSKLGCLEKLDL 853

Query: 713 SGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
           SG S   EFP+++ +   + E++L+GTAIR +P+SIE L      +L++CK  + LPS+I
Sbjct: 854 SGCSSITEFPKVSRN---IRELYLDGTAIREIPSSIECLCELNELHLRNCKQFEILPSSI 910

Query: 773 NGLRSLRMMYPSGCSKLKNVTETL 796
             L+ LR +  SGC + ++  E L
Sbjct: 911 CKLKKLRRLNLSGCLQFRDFPEVL 934



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 84/162 (51%), Gaps = 14/162 (8%)

Query: 656  EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
            EFP    +I ++  DGT IRE+  +IE L  L +L L  CK  E LP +I  LK L  LN
Sbjct: 861  EFPKVSRNIRELYLDGTAIREIPSSIECLCELNELHLRNCKQFEILPSSICKLKKLRRLN 920

Query: 712  LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
            LSG  +FR+FPE+      L  ++LE T I  LP+ I  L G     + +CK L+ +   
Sbjct: 921  LSGCLQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLACLEVGNCKYLEDIHCF 980

Query: 772  IN---------GLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            +           L  LR +   GCS L  V ++LG + SLEV
Sbjct: 981  VGLQLSKRHRVDLDCLRKLNLDGCS-LSEVPDSLGLLSSLEV 1021



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 4/114 (3%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I+ L  LV L L GCK L  LP  I++   L TLNLSG +  ++ PE      +L  ++
Sbjct: 682 SIQHLDKLVDLDLRGCKRLINLPSRINS-SCLETLNLSGCANLKKCPETAG---KLTYLN 737

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           L  TA+  LP SI  LSG +  NLK+CK + +LP  I  L+SL ++  SGCS +
Sbjct: 738 LNETAVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLLIVDISGCSSI 791



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL  +I  L GLV L L  CK +  LP  I  LK L  +++SG S    FP+ + +
Sbjct: 741 TAVEELPQSIGELSGLVTLNLKNCKLVLNLPENIYLLKSLLIVDISGCSSISRFPDFSWN 800

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              +  ++L GTAI  LP+SI  L   I  +L  C  LK+LPS ++ L  L  +  SGCS
Sbjct: 801 ---IRYLYLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVSKLGCLEKLDLSGCS 857

Query: 788 KL 789
            +
Sbjct: 858 SI 859



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 131/302 (43%), Gaps = 47/302 (15%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTI-----SSLKCLRTLELS 60
           +L  L+ DG  +T +P +      +EL       NLSS  V        +L  L+ + LS
Sbjct: 596 ELRYLHWDGYPLTSLPCNFRPQNLVEL-------NLSSSKVKQLWRGDQNLGNLKDVNLS 648

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C  +   P       DLSK                    LE L L  CK+LV+ PSSI 
Sbjct: 649 NCEHITFLP-------DLSKAR-----------------NLERLNLQFCKSLVKFPSSIQ 684

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L  L  L+L GC +L N+P  +     LE L++SG A  +            +L  +  
Sbjct: 685 HLDKLVDLDLRGCKRLINLPSRINS-SCLETLNLSGCANLKKCPETAGKLTYLNLNETAV 743

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            E P S      L    L   +C + L LP ++  + SL  +D+S C    ++I    D 
Sbjct: 744 EELPQSIGELSGLV--TLNLKNCKLVLNLPENIYLLKSLLIVDISGC----SSISRFPDF 797

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCS 296
             +++ LYLN      LP+SI GL  L  L+L  C RL++LP        L+ +  +GCS
Sbjct: 798 SWNIRYLYLNGTAIEELPSSIGGLRELIYLDLVGCNRLKNLPSAVSKLGCLEKLDLSGCS 857

Query: 297 SL 298
           S+
Sbjct: 858 SI 859



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD-QLLEIHLEGTAI 741
           LV+L L+  K +++L R    L  L  +NLS        P+++ +R+ + L +    + +
Sbjct: 619 LVELNLSSSK-VKQLWRGDQNLGNLKDVNLSNCEHITFLPDLSKARNLERLNLQFCKSLV 677

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           +  P+SI+ L   +  +L+ CK L +LPS IN    L  +  SGC+ LK   ET GK+  
Sbjct: 678 K-FPSSIQHLDKLVDLDLRGCKRLINLPSRINS-SCLETLNLSGCANLKKCPETAGKLTY 735

Query: 802 LEV 804
           L +
Sbjct: 736 LNL 738


>gi|408537058|gb|AFU75182.1| nematode resistance-like protein, partial [Solanum acaule]
          Length = 292

 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/288 (46%), Positives = 187/288 (64%), Gaps = 25/288 (8%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI++  SS+ L+KNL+ L   GCN   A  ++     
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCN---AGVNFQ---- 183

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                           +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 184 ----------------NLSGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFS 227

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L DC RL+SLP++PP+++ + ANGC+SL+++
Sbjct: 228 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 275



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           KLK  P  +  +  L +L    T+I ++PSS+ LL  L+ L L  C   V    +++GL 
Sbjct: 131 KLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCNAGVNF-QNLSGLC 189

Query: 124 SLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGC 180
           SL  L+LS C   +  +   LG + SLE L ++G      P +SI  +  L+ L    C
Sbjct: 190 SLIMLDLSDCSISDGGILSNLGFLPSLELLILNGNNFSNIPDASISRLTRLKCLKLHDC 248



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGIGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L E+    TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGLLVGLEELQCTHTAIQKIPSSMSLLKNLKHLSLRGCN 177

Query: 764 ---NLKSLPSTINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSSWNRPKMQNDFD 819
              N ++L    +GL SL M+  S CS     +   LG + SLE+ + +       N+F 
Sbjct: 178 AGVNFQNL----SGLCSLIMLDLSDCSISDGGILSNLGFLPSLELLILNG------NNFS 227

Query: 820 CVEQSAVETVTKL 832
            +  +++  +T+L
Sbjct: 228 NIPDASISRLTRL 240


>gi|359493570|ref|XP_002270429.2| PREDICTED: uncharacterized protein LOC100253289 [Vitis vinifera]
          Length = 2663

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 154/503 (30%), Positives = 246/503 (48%), Gaps = 53/503 (10%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G +I+  P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 1633 LCLKGQTISLPP--IECASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSDCSQLQYFP 1690

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I+ +ME+L +L+L+GT+I E+PSSIE L  L++L L  CKNLV LP SI  L+ L+ LN
Sbjct: 1691 EILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLN 1750

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            ++ C KL  +P  LG+++SL+ L   G   R                   C +  + +  
Sbjct: 1751 VNYCSKLHKLPQNLGRLQSLKCLRARGLNSR-------------------CCQLLSLSGL 1791

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                  +L+  S     ++L  +  + SL  +DL  CG+ E  IP++I  L SL+EL+L 
Sbjct: 1792 CSLKELDLI-YSKLMQGVVLSDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLF 1850

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             N F ++PA I+ L  L  L L +C+ L+ +P +P +L+ +  + C  L T  G L    
Sbjct: 1851 GNLFRSIPAGINQLSRLRLLVLGNCQELRQIPALPSSLRVLDIHLCKRLETSSGLL---- 1906

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS-QIPKWFMYQNE 368
               ++ NC  SL         I  L    ++  +  P  +++++   S  IP W  +  +
Sbjct: 1907 -WSSLFNCFKSL---------IQDLE--CKIYPLEKPFARVNLIISESCGIPDWISHHKK 1954

Query: 369  GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYI 428
            G+ +    P   Y  + ++GF + CV+    + +   L +     E   ++     GH I
Sbjct: 1955 GAEVVAKLPQNWYKNDDLLGFVLYCVYYPLDNESEETLENGATYFEYGLTL----RGHEI 2010

Query: 429  YFRGKFGHVVSDH------LWLLFLPRHGHNWQFESNLIRLSFRS----ISDPTWKVKRC 478
             F  K     S H      +W+++ P+H    ++ SN  R    S    +     KV+ C
Sbjct: 2011 QFVDKLQFYPSFHVYVVPCMWMIYYPKHEIEEKYHSNKWRQLTASFCGYLRGKAVKVEEC 2070

Query: 479  GFHPIYMHEVEEFDETTKQSTRF 501
            G H IY H+ E+       ST F
Sbjct: 2071 GIHLIYAHDHEQNHGKAMISTEF 2093



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 210/414 (50%), Gaps = 62/414 (14%)

Query: 24   IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
            IE  +  + L L+ CKNL SLP  I   K L++L  S CS+L+ FP+I+ +ME+L +L+L
Sbjct: 1087 IERASEFDTLCLRECKNLESLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHL 1146

Query: 84   DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
            +GT+I E+PSSIE L  L++L L  CKNLV LP SI  L+ L+ LN++ C KL  +P  L
Sbjct: 1147 NGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQNL 1206

Query: 144  GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSC 203
            G+++SL+ L   G   R                   C +  + +        +L+  S  
Sbjct: 1207 GRLQSLKRLRARGLNSR-------------------CCQLLSLSGLCSLKELDLI-YSKL 1246

Query: 204  PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGL 263
               ++L  +  + S+  LDLS CG+ E  IP++I  L SL+EL L  N F ++PA I+ L
Sbjct: 1247 MQGVVLSDICCLYSVEVLDLSFCGIDEGGIPTEICQLSSLQELLLIGNLFRSIPAGINQL 1306

Query: 264  LNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA-------------LKLCRS 310
              L  L L +C+ L+ +P +P  LQ +    CS+LV+L  A             L  C+ 
Sbjct: 1307 SRLRLLVLSNCQELRQIPVLPSRLQHLNLADCSNLVSLPEAICIIQLSKLRVLELSHCQG 1366

Query: 311  KYTIINCIDSLKLLRKNG-------------LAISMLR------EYLELQAVSDP----- 346
               +     SL++L  +              L +S+ +      E L+ ++ S+      
Sbjct: 1367 LLQVPELPPSLRVLDVHSCTCLEVLSSPSCLLGVSLFKCFKSTIEDLKYKSSSNEVFLRD 1426

Query: 347  ----GHKLSIVFPGS-QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
                G+ + IV PGS  IPKW   Q EG+ IT+  P   Y  N  +G AICCV+
Sbjct: 1427 SDFIGNGVCIVVPGSCGIPKWIRNQREGNHITMDLPQNCYENNDFLGIAICCVY 1480



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 2/121 (1%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G +I  +P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 2531 LCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYFP 2588

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I+ +ME+L +L+L+GT+I E+PSSIE L  LELL L+ C+NLV LP S   L  L+ LN
Sbjct: 2589 EILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVLN 2648

Query: 130  L 130
            +
Sbjct: 2649 V 2649



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 99/182 (54%), Gaps = 22/182 (12%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   + E+P+    +  LE L L GC         I  LK    + + GCS+L  FP+I 
Sbjct: 643 DSQQLIELPN-FSNVPNLEELNLSGC---------IILLKVHTHIRVFGCSQLTSFPKIK 692

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
            S+  L +L LD T+I E+PSSIELL GL  LYL+ CKNL  LP+SI  L+ L+ L+L G
Sbjct: 693 RSIGKLERLSLDNTAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEG 752

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSS------------IFLMKNLRSLYFSGC 180
           C KL+ +P+ L ++  LE L ++  + + P+ S            I  + NLR+L  S C
Sbjct: 753 CSKLDRLPEDLERMPCLEVLSLNSLSCQLPSLSEEGGTLSDMLVGISQLSNLRALDLSHC 812

Query: 181 NE 182
            +
Sbjct: 813 KK 814



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 75/118 (63%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
            L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L ++HL GTAI+ LP
Sbjct: 1654 LCLRECKNLESLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELP 1713

Query: 746  ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +SIE L+   + NL+ CKNL +LP +I  LR L  +  + CSKL  + + LG+++SL+
Sbjct: 1714 SSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKLPQNLGRLQSLK 1771



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 73/118 (61%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
            L L  CKNLE LP  I   K L +L  S  S+ + FPEI  + + L ++HL GTAI+ LP
Sbjct: 1096 LCLRECKNLESLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHLNGTAIKELP 1155

Query: 746  ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +SIE L+   + NL  CKNL +LP +I  LR L  +  + CSKL  + + LG+++SL+
Sbjct: 1156 SSIERLNRLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQNLGRLQSLK 1213



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 149/349 (42%), Gaps = 68/349 (19%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC-- 134
           DL  L L  ++I  +      L  L  + LN+ + L+ LP+  N + +L+ LNLSGC   
Sbjct: 612 DLVFLGLSNSNIKRLWKGNMCLRNLRYINLNDSQQLIELPNFSN-VPNLEELNLSGCIIL 670

Query: 135 -------------KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
                        +L + P     +  LE L +  TAI+   SSI L++ LR+LY   C 
Sbjct: 671 LKVHTHIRVFGCSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGLRNLYLDNCK 730

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                 +   +L F           L + SL G   L +L            P D++ + 
Sbjct: 731 NLEGLPNSICNLRF-----------LEVLSLEGCSKLDRL------------PEDLERMP 767

Query: 242 SLKELYLNR------------NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
            L+ L LN                  +   IS L NL  L+L  CK++  +P++P +L+ 
Sbjct: 768 CLEVLSLNSLSCQLPSLSEEGGTLSDMLVGISQLSNLRALDLSHCKKVSQIPELPSSLRL 827

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINCIDSL--KLLRKNGLAISMLREYLELQAVSDPG 347
           +  +  SS+ T    +      ++++NC+ S    L  K+   +  L +   +      G
Sbjct: 828 LDMH--SSIGTSLPPM------HSLVNCLKSASEDLKYKSSSNVVFLSDSYFI------G 873

Query: 348 HKLSIVFPGS-QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
           H + IV PGS  IP W   Q + + IT+  P   Y  N  +G AICCV+
Sbjct: 874 HGICIVVPGSCGIPNWIRNQRKENRITMDLPRNCYENNDFLGIAICCVY 922



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 7/187 (3%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +M++L  L+L+GT+I E+PSSIE L  L++L L+ CKNL +LP +I +L+ L  L ++
Sbjct: 1693 LENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVN 1752

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTS----IAEVPSSIELLPGLELLYLNECKNLVRLP 116
             CSKL K PQ +  ++ L  L   G +         S +  L  L+L+Y    + +V   
Sbjct: 1753 YCSKLHKLPQNLGRLQSLKCLRARGLNSRCCQLLSLSGLCSLKELDLIYSKLMQGVVL-- 1810

Query: 117  SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
            S I  L SL+ ++L  C   E  +P  + ++ SL+EL + G   R   + I  +  LR L
Sbjct: 1811 SDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLFGNLFRSIPAGINQLSRLRLL 1870

Query: 176  YFSGCNE 182
                C E
Sbjct: 1871 VLGNCQE 1877



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 12/157 (7%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           S+  L  L LD T+I E+PSSIELL GL  L L  CKNL  LP +I +L+ L  L L GC
Sbjct: 694 SIGKLERLSLDNTAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGC 753

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           SKL + P+ +  M  L  L L+  S  ++PS  E           E   L  +   I+ L
Sbjct: 754 SKLDRLPEDLERMPCLEVLSLNSLS-CQLPSLSE-----------EGGTLSDMLVGISQL 801

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            +L+ L+LS C K+  +P+    +  L+     GT++
Sbjct: 802 SNLRALDLSHCKKVSQIPELPSSLRLLDMHSSIGTSL 838



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L+GC         I  LK  + + + G S+   FP+I  S  +L  + L+ TAI+
Sbjct: 659 LEELNLSGC---------IILLKVHTHIRVFGCSQLTSFPKIKRSIGKLERLSLDNTAIK 709

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+SIELL G     L +CKNL+ LP++I  LR L ++   GCSKL  + E L ++  L
Sbjct: 710 ELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCL 769

Query: 803 EV 804
           EV
Sbjct: 770 EV 771



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 61/107 (57%)

Query: 675  LAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
            L IE       L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L E+
Sbjct: 2541 LPIEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYFPEILENMENLREL 2600

Query: 735  HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
            HL GTAI+ LP+SIE L+   L NL  C+NL +LP +   L  L ++
Sbjct: 2601 HLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVL 2647



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 63/134 (47%), Gaps = 12/134 (8%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-- 723
           D T I+EL  +IELL GL  L L+ CKNLE LP +I  L++L  L+L G SK    PE  
Sbjct: 704 DNTAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDL 763

Query: 724 ----------ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
                     + S   QL  +  EG  +  +   I  LS     +L  CK +  +P   +
Sbjct: 764 ERMPCLEVLSLNSLSCQLPSLSEEGGTLSDMLVGISQLSNLRALDLSHCKKVSQIPELPS 823

Query: 774 GLRSLRMMYPSGCS 787
            LR L M    G S
Sbjct: 824 SLRLLDMHSSIGTS 837



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 80   KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            KL L G +I  +P  IE     + L L ECKNL  LP+SI   KSLK+L  S C +L+  
Sbjct: 2530 KLCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYF 2587

Query: 140  PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            P+ L  +E+L EL ++GTAI+   SSI  +  L  L    C
Sbjct: 2588 PEILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRC 2628



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 43/197 (21%)

Query: 347  GHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-------QVP 398
            GH + IV PGS  IPKW   Q EG  IT+  P   Y  N  +G AICCV+        +P
Sbjct: 2328 GHGICIVVPGSSGIPKWIRKQREGYQITMDLPQSCYENNDFLGIAICCVYAPLDECEDIP 2387

Query: 399  KH------------------STGTYLFHSYPAHELECSM---DGSGEG----HYIYFRG- 432
            ++                  S   +   S  + ELEC +   DG G        + FR  
Sbjct: 2388 ENDFAHTFSENESGDEALNESDDLFEAESSISTELECQLSLHDGYGFSPLCVQPLSFRTT 2447

Query: 433  -KFGHV--VSDHLWLLFLPRHG--HNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMH- 486
             K  H    S+ +W++F P+     +     ++   +    S   +KV +CG  PIY   
Sbjct: 2448 CKCYHDGGASEQMWVIFYPKAAILESCHTNPSMFLGALFMGSRNHFKVLKCGLQPIYSQD 2507

Query: 487  ---EVEEFDETTKQSTR 500
               + E+ D +  +  R
Sbjct: 2508 PIVQTEDVDASCVECQR 2524



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 42/64 (65%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +M++L +L+L+GT+I E+PSSIE L  LELL L  C+NL +LP +  +L  L  L + 
Sbjct: 2591 LENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVLNVC 2650

Query: 61   GCSK 64
               K
Sbjct: 2651 APDK 2654



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 11/85 (12%)

Query: 646  NCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
            +CS+L      FP+I++ + +       GT I+EL  +IE L  L  L L  CKNL  LP
Sbjct: 1124 DCSQL----QYFPEILETMENLRQLHLNGTAIKELPSSIERLNRLQVLNLGRCKNLVTLP 1179

Query: 699  RTISALKYLSTLNLSGLSKFREFPE 723
             +I  L++L  LN++  SK  + P+
Sbjct: 1180 ESICNLRFLEDLNVNFCSKLHKLPQ 1204



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 22/128 (17%)

Query: 736  LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            L+G  I  LP  IE  S      L++CKNL+SLP++I   +SL+ ++ S CS+L+   E 
Sbjct: 2533 LKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYFPEI 2590

Query: 796  LGKVESL-EVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVDKCMKL 854
            L  +E+L E+ L+     ++         S++E + +L   ELL        N+D+C  L
Sbjct: 2591 LENMENLRELHLNGTAIKEL--------PSSIEHLNRL---ELL--------NLDRCQNL 2631

Query: 855  STTATSAC 862
             T   S C
Sbjct: 2632 VTLPGSTC 2639



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 99/261 (37%), Gaps = 41/261 (15%)

Query: 350  LSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
            + +V  G+  IP+W     +GS IT+   + LY  +  +GFA+  VF +P       +  
Sbjct: 2103 IRVVISGNDGIPEWISQPKKGSQITIELSTDLYRKDGFLGFALYSVF-IP-------MAC 2154

Query: 409  SYPAHELECSMDGSGEGHYIYFRGKFGHVV--SDHLWLLFLPR---HGHNWQFESNLIRL 463
             +   EL    D S   H    R     +   S  + + + P+       W  E   ++ 
Sbjct: 2155 GWLNCELNICGDQSECCHVDDVRSYCCRICGESSQMCVTYYPKVVIGNQYWSNEWRRLKA 2214

Query: 464  SFRSISDPTWKVKRCGFHPIYMHEV--EEFDETTKQSTRFTSCNLNEV----HHDFVGSN 517
            SF S+     +VK CGFH IY  +V      E T    R  SC+  E     H   +  N
Sbjct: 2215 SFHSLDGTPVEVKECGFHLIYTPDVINRNIPEDTSSDAR-RSCDNTEATRRDHQTMIEYN 2273

Query: 518  MEVAQASGSGSSQWKWLKPVEVAVVMIMMRNHNLRDLDNSNEGQSLLNRGTVEDLWYNSR 577
             E        +++     P                    SN+    L+   V+DL Y S 
Sbjct: 2274 DEQRSCDTRSAAEDTNSNP------------------QTSNDYPLDLHCPFVQDLKYKSS 2315

Query: 578  AYDVFDDMPTKERASHLMCCI 598
            + +VF  +P  +   H +C +
Sbjct: 2316 SNEVF--LPDSDFIGHGICIV 2334



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 11/85 (12%)

Query: 646  NCSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
            +CS+L      FP+I+       Q+  +GT I+EL  +IE L  L  L L  CKNL  LP
Sbjct: 1682 DCSQL----QYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLP 1737

Query: 699  RTISALKYLSTLNLSGLSKFREFPE 723
             +I  L++L  LN++  SK  + P+
Sbjct: 1738 ESICNLRFLEDLNVNYCSKLHKLPQ 1762



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 195  FNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
            F+ L    C     LP S+    SL  L  SDC   +   P  ++N+ +L+EL+LN    
Sbjct: 2549 FDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQY-FPEILENMENLRELHLNGTAI 2607

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA-NGCS 296
              LP+SI  L  LE L L+ C+ L +LP    NL F+   N C+
Sbjct: 2608 KELPSSIEHLNRLELLNLDRCQNLVTLPGSTCNLCFLEVLNVCA 2651


>gi|399920215|gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 170/530 (32%), Positives = 263/530 (49%), Gaps = 43/530 (8%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L   I   + L++++LS    L + P     + +L KL L+G T++ EV  S  LL
Sbjct: 564  NIDHLWNGIKYSRNLKSIDLSYSINLTRTPDFTG-IPNLEKLVLEGCTNLVEVHQSTGLL 622

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L +L L  CK++  LPS ++ ++ L+T ++SGC KL+ +P+ +G+++ L  L +SGTA
Sbjct: 623  QKLRILNLRNCKSIKSLPSEVH-MEFLETFDVSGCSKLKMIPEFVGQMKRLSRLSLSGTA 681

Query: 159  IRRPTSSIFLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPSL 212
            + +  S   L ++L  L  SG    E P S     +L  +  G    KS  P+  +L SL
Sbjct: 682  VEKLPSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLASL 741

Query: 213  TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
                SLT L L+DC L E  +P+DI +L SL+ LYL  NNF TLPASI  L  L  + +E
Sbjct: 742  KHFSSLTTLKLNDCNLCEGELPNDIGSLSSLEWLYLGGNNFSTLPASIHLLSKLRYINVE 801

Query: 273  DCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI-INCIDSLKLLRKNGLA- 330
            +CKRLQ LP++  N    R + C+SL        LCR   +  +NC++ L ++     + 
Sbjct: 802  NCKRLQQLPELSANDVLSRTDNCTSLQLFPDPPDLCRITTSFWLNCVNCLSMVGNQDASY 861

Query: 331  --ISMLREYLELQAVS-------------DPGHKLSIVFPGSQIPKWFMYQNEGSSITVT 375
               S+L+ ++E+Q ++              P   L +V PGS+IP+WF  Q+ G  +T  
Sbjct: 862  FLYSVLKRWIEIQVLTRCDMTVHMQETHRRPLESLKVVIPGSEIPEWFNNQSVGDRVTEK 921

Query: 376  RPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRG-KF 434
             PS     +K++GFA+C +  VP+ +       S            +  G  I   G   
Sbjct: 922  LPSD-ECYSKLIGFAVCALI-VPQDNPSAVPEESNLPDTCHIVRLWNNYGFDIASVGIPV 979

Query: 435  GHVVSDHLWLLFL------PRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEV 488
               VSDHL+LL L      P +   ++F   + R      ++   KVK+CG   +Y H+ 
Sbjct: 980  KQFVSDHLYLLVLLNPFRKPENCLEFEFSFEIRRAVG---NNRGMKVKKCGVRALYEHDT 1036

Query: 489  EEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSSQWKWLKPVE 538
            EE      QS + +S +L E   D      + A  SGSG S  ++    E
Sbjct: 1037 EELISKMNQS-KSSSISLYEEAMD----EQKEAATSGSGGSDDEYYSAAE 1081



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 59/100 (59%), Gaps = 3/100 (3%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ E+  +  LL  L  L L  CK+++ LP  +  +++L T ++SG S
Sbjct: 599 PNLEKLVLEGCTNLVEVHQSTGLLQKLRILNLRNCKSIKSLPSEVH-MEFLETFDVSGCS 657

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE      +L  + L GTA+  LP SIE LS +++
Sbjct: 658 KLKMIPEFVGQMKRLSRLSLSGTAVEKLP-SIEHLSESLV 696



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 34/171 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGC---------------------- 38
           +  MK LS L L GT++ ++PS   L   L  L L G                       
Sbjct: 666 VGQMKRLSRLSLSGTAVEKLPSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGL 725

Query: 39  ---KNLSSLPVTISSLK---CLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEV 91
              K+   L   ++SLK    L TL+L+ C+  + + P  + S+  L  LYL G + + +
Sbjct: 726 FPRKSPHPLIPLLASLKHFSSLTTLKLNDCNLCEGELPNDIGSLSSLEWLYLGGNNFSTL 785

Query: 92  PSSIELLPGLELLYLNECKNLVRLPS-SINGLKSLKTLNLSGCCKLENVPD 141
           P+SI LL  L  + +  CK L +LP  S N + S +T N   C  L+  PD
Sbjct: 786 PASIHLLSKLRYINVENCKRLQQLPELSANDVLS-RTDN---CTSLQLFPD 832



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I   + L +++LS        P+ T   + L ++ LEG T +  +  S  LL
Sbjct: 564 NIDHLWNGIKYSRNLKSIDLSYSINLTRTPDFTGIPN-LEKLVLEGCTNLVEVHQSTGLL 622

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
               + NL++CK++KSLPS ++ +  L     SGCSKLK + E +G+++ L  RLS
Sbjct: 623 QKLRILNLRNCKSIKSLPSEVH-MEFLETFDVSGCSKLKMIPEFVGQMKRLS-RLS 676


>gi|359493208|ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/510 (31%), Positives = 246/510 (48%), Gaps = 63/510 (12%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            +M+ L  LYLDGT+I E+PSSI+ L+ L     + CKNL SLP +I  LK L+ L  + C
Sbjct: 1132 NMECLQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNC 1191

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            SKL  FP+++ +M +L +L+L GT+I ++PSSIE L GLE L L  CK LV LP+ I  L
Sbjct: 1192 SKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNL 1251

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN 181
            KSLKTL++ GC KL  +P +LG ++ LE LD     +I  P  S   + +LR L+ +G N
Sbjct: 1252 KSLKTLHVYGCSKLNKLPKSLGSLQCLEHLDAGCLGSIAPPLPSFSGLCSLRILHLNGLN 1311

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                   W +                    +  + SL  LDL++C L +     +I +L 
Sbjct: 1312 ----LMQWSIQ-----------------DDICRLYSLEVLDLTNCNLIDDGTADEIFHLS 1350

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            SL+ L L+RN+   +PA IS L  L+ L    C+    +P++P +L+ +  + C+ L+TL
Sbjct: 1351 SLQVLLLSRNHISKIPAGISQLSKLQVLGFSHCEMAVEIPELPSSLRSIDVHACTGLITL 1410

Query: 302  FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP-----------GHKL 350
                 L  +  ++  C  S     + G                DP           G  +
Sbjct: 1411 SNPSSLFWA--SLFKCFKSAIQDLECG------------NHCYDPSPEAWPDFCYFGQGI 1456

Query: 351  SIVFP-GSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP--KHSTGTYLF 407
            SI+ P  S IP+W  +Q  GS +T   P Y Y    ++GFA+  V  +P    S      
Sbjct: 1457 SILIPRSSGIPEWIRHQKNGSRVTTELPRYWYKNKDLLGFALFSV-HIPLDNESVDISED 1515

Query: 408  HSYPAHELECSMDGSGEGHYI--------YFRGKFGHVVSDHLWLLFLPRHGHNWQFESN 459
               P   L+C +   G+            +         S  +W+L+ P+     ++ SN
Sbjct: 1516 EDLPCCSLKCELTFRGDQFAFLDDLSLDSWCECYKNDGASGQVWVLYYPKVAIKEKYHSN 1575

Query: 460  ---LIRLSFRSISDPT-WKVKRCGFHPIYM 485
                ++ SF    + T  KV++CG   IY+
Sbjct: 1576 KWRRLKASFHCYLNGTPVKVEKCGMQLIYV 1605



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 193/419 (46%), Gaps = 67/419 (15%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  L+ DG  +  +PS+      +EL  L+ C N+  L  T    K L+ + LS    
Sbjct: 597 QELRYLHWDGYPLESLPSNFYAENLVEL-NLR-CSNIKQLWET-ELFKKLKVINLSHSKH 653

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L K P                      PS +   P LE+L L  C NL  LP SI  L+ 
Sbjct: 654 LNKIPN---------------------PSCV---PNLEILTLEGCINLESLPRSIYKLRR 689

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE-- 182
           LKTL   GC  L + P+ +G +E L +LD+  TAI +  SSI  +K L  L  S C +  
Sbjct: 690 LKTLCCGGCKNLRSFPEIMGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLI 749

Query: 183 -PPASASWHLHLPF-------------NLLGKSSCPVAL-------MLPSLTGVCSLTKL 221
             P S      L F               L    C   L        LPS++G+CSL  L
Sbjct: 750 TVPQSICNLTSLKFLNFDFCSKLEKLPEDLKSLKCLQKLYLQDLNCQLPSVSGLCSLKVL 809

Query: 222 DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           +LS+C L +  IPS++  L SLKEL L+ N+F ++PASIS L  L+ L L  C+ L  +P
Sbjct: 810 NLSECNLMDGEIPSEVCQLSSLKELDLSWNHFSSIPASISQLSKLKALGLSHCRNLLQIP 869

Query: 282 QIPPNLQFVRA-NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL 340
           ++P  LQF+ A N   +L +    L    S++    C  S +      L +     Y E 
Sbjct: 870 ELPSTLQFLDAHNSHFTLSSPSSFLPSSFSEFQDFVCGSSFQ------LCVCYSYSYFE- 922

Query: 341 QAVSDPGHKLSIVFPG-SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP 398
                    +SI FPG S IP+W M +N G+ +T+  P   +     +GFA+C  + VP
Sbjct: 923 -------EGVSIFFPGISGIPEWIMGENMGNHVTIDLPQDWFEDKDFLGFALCSAY-VP 973



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/138 (44%), Positives = 87/138 (63%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            DGT I+E+  +I+ L  LV+     CKNLE LPR+I  LKYL  L  +  SK   FPE+ 
Sbjct: 1142 DGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCSKLGSFPEVM 1201

Query: 726  SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
             + + L E+HL GTAI+ LP+SIE L G    +L  CK L +LP+ I  L+SL+ ++  G
Sbjct: 1202 ENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVYG 1261

Query: 786  CSKLKNVTETLGKVESLE 803
            CSKL  + ++LG ++ LE
Sbjct: 1262 CSKLNKLPKSLGSLQCLE 1279



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 96/181 (53%), Gaps = 27/181 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L LD T+I ++PSSIE L GLE L L  CK+L ++P +I +L  L+ L   
Sbjct: 708 MGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFD 767

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            CSKL+K P+ + S++ L KLYL   +                          +LP S++
Sbjct: 768 FCSKLEKLPEDLKSLKCLQKLYLQDLN-------------------------CQLP-SVS 801

Query: 121 GLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           GL SLK LNLS C  ++  +P  + ++ SL+ELD+S        +SI  +  L++L  S 
Sbjct: 802 GLCSLKVLNLSECNLMDGEIPSEVCQLSSLKELDLSWNHFSSIPASISQLSKLKALGLSH 861

Query: 180 C 180
           C
Sbjct: 862 C 862



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 71/118 (60%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLE LPR+I  L+ L TL   G    R FPEI    ++L ++ L+ TAI  LP
Sbjct: 669 LTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRSFPEIMGDMEKLRKLDLDNTAIVKLP 728

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SIE L G    +L +CK+L ++P +I  L SL+ +    CSKL+ + E L  ++ L+
Sbjct: 729 SSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLKSLKCLQ 786



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 9/186 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M +M +L +L+L GT+I ++PSSIE L GLE L L  CK L +LP  I +LK L+TL + 
Sbjct: 1201 MENMNNLRELHLHGTAIQDLPSSIENLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVY 1260

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDG---TSIAEVPSSIELLPGLELLYLNECKNLVR--L 115
            GCSKL K P+ + S++ L   +LD     SIA    S   L  L +L+LN   NL++  +
Sbjct: 1261 GCSKLNKLPKSLGSLQCLE--HLDAGCLGSIAPPLPSFSGLCSLRILHLNGL-NLMQWSI 1317

Query: 116  PSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
               I  L SL+ L+L+ C  +++   D +  + SL+ L +S   I +  + I  +  L+ 
Sbjct: 1318 QDDICRLYSLEVLDLTNCNLIDDGTADEIFHLSSLQVLLLSRNHISKIPAGISQLSKLQV 1377

Query: 175  LYFSGC 180
            L FS C
Sbjct: 1378 LGFSHC 1383



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 49/72 (68%)

Query: 731  LLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            L +++L+GTAI+ +P+SI+ LS  +    ++CKNL+SLP +I  L+ L+++  + CSKL 
Sbjct: 1136 LQKLYLDGTAIKEIPSSIDSLSILVEFYTRNCKNLESLPRSICRLKYLQVLCCTNCSKLG 1195

Query: 791  NVTETLGKVESL 802
            +  E +  + +L
Sbjct: 1196 SFPEVMENMNNL 1207



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 62/231 (26%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTD-----IRELSLAIELLFGL 683
           ++ G   VR Q+P++PG  SRLWE  D F   V   ++GT+       ++S + +L F  
Sbjct: 489 QQMGWHIVREQNPEKPGKWSRLWEREDVFR--VLTRNEGTEAIKGIFLDMSTSKQLQFTT 546

Query: 684 VQLTLNGCKNLERLPRTI---SALKY-----LSTLNLSGLSKFREFPEITSSRDQLLEIH 735
               +     L ++ +     SA+KY     L  ++LS +   R+F E  S   +L  +H
Sbjct: 547 EAFKVMNDLRLLKVHQDANYDSAVKYWTLAGLFEMHLSQVHFCRDF-EFPSQ--ELRYLH 603

Query: 736 LEGTAIRGLPAS--------IELLSGNI-------------------------------- 755
            +G  +  LP++        + L   NI                                
Sbjct: 604 WDGYPLESLPSNFYAENLVELNLRCSNIKQLWETELFKKLKVINLSHSKHLNKIPNPSCV 663

Query: 756 ----LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               +  L+ C NL+SLP +I  LR L+ +   GC  L++  E +G +E L
Sbjct: 664 PNLEILTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRSFPEIMGDMEKL 714



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 29/182 (15%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I+  +        D T I +L  +IE L GL  L L+ CK+L  +P++I  L  L  
Sbjct: 704 FPEIMGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKF 763

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEG-----TAIRGLP-------ASIELLSGNI-- 755
           LN    SK  + PE   S   L +++L+       ++ GL        +   L+ G I  
Sbjct: 764 LNFDFCSKLEKLPEDLKSLKCLQKLYLQDLNCQLPSVSGLCSLKVLNLSECNLMDGEIPS 823

Query: 756 ----LSNLKDC----KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
               LS+LK+      +  S+P++I+ L  L+ +  S C  L  + E    ++ L+   S
Sbjct: 824 EVCQLSSLKELDLSWNHFSSIPASISQLSKLKALGLSHCRNLLQIPELPSTLQFLDAHNS 883

Query: 808 SW 809
            +
Sbjct: 884 HF 885


>gi|297734813|emb|CBI17047.3| unnamed protein product [Vitis vinifera]
          Length = 2101

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 246/506 (48%), Gaps = 53/506 (10%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G +I+  P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 1290 LCLKGQTISLPP--IECASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSDCSQLQYFP 1347

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I+ +ME+L +L+L+GT+I E+PSSIE L  L++L L  CKNLV LP SI  L+ L+ LN
Sbjct: 1348 EILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLN 1407

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            ++ C KL  +P  LG+++SL+ L   G   R                   C +  + +  
Sbjct: 1408 VNYCSKLHKLPQNLGRLQSLKCLRARGLNSR-------------------CCQLLSLSGL 1448

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                  +L+  S     ++L  +  + SL  +DL  CG+ E  IP++I  L SL+EL+L 
Sbjct: 1449 CSLKELDLI-YSKLMQGVVLSDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLF 1507

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             N F ++PA I+ L  L  L L +C+ L+ +P +P +L+ +  + C  L T  G L    
Sbjct: 1508 GNLFRSIPAGINQLSRLRLLVLGNCQELRQIPALPSSLRVLDIHLCKRLETSSGLL---- 1563

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS-QIPKWFMYQNE 368
               ++ NC  SL         I  L    ++  +  P  +++++   S  IP W  +  +
Sbjct: 1564 -WSSLFNCFKSL---------IQDLE--CKIYPLEKPFARVNLIISESCGIPDWISHHKK 1611

Query: 369  GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYI 428
            G+ +    P   Y  + ++GF + CV+    + +   L +     E   ++     GH I
Sbjct: 1612 GAEVVAKLPQNWYKNDDLLGFVLYCVYYPLDNESEETLENGATYFEYGLTL----RGHEI 1667

Query: 429  YFRGKFGHVVSDH------LWLLFLPRHGHNWQFESNLIRLSFRS----ISDPTWKVKRC 478
             F  K     S H      +W+++ P+H    ++ SN  R    S    +     KV+ C
Sbjct: 1668 QFVDKLQFYPSFHVYVVPCMWMIYYPKHEIEEKYHSNKWRQLTASFCGYLRGKAVKVEEC 1727

Query: 479  GFHPIYMHEVEEFDETTKQSTRFTSC 504
            G H IY H+ E+       ST    C
Sbjct: 1728 GIHLIYAHDHEQNHGKAMISTVCREC 1753



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 234/862 (27%), Positives = 368/862 (42%), Gaps = 158/862 (18%)

Query: 1    MASMKDLSDLYLDGTSIT-EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             +++ +L +L L G  I  +V + I   +  + L L+ CKNL SLP  I   K L++L  
Sbjct: 362  FSNVPNLEELNLSGCIILLKVHTHIRRASEFDTLCLRECKNLESLPTIIWEFKSLKSLFC 421

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CS+L+ FP+I+ +ME+L +L+L+GT+I E+PSSIE L  L++L L  CKNLV LP SI
Sbjct: 422  SDCSQLQYFPEILETMENLRQLHLNGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESI 481

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L+ L+ LN++ C KL  +P  LG+++SL+ L   G   R                   
Sbjct: 482  CNLRFLEDLNVNFCSKLHKLPQNLGRLQSLKRLRARGLNSR------------------- 522

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C +  + +        +L+  S     ++L  +  + S+  LDLS CG+ E  IP++I  
Sbjct: 523  CCQLLSLSGLCSLKELDLI-YSKLMQGVVLSDICCLYSVEVLDLSFCGIDEGGIPTEICQ 581

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SL+EL L  N F ++PA I+ L  L  L L +C+ L+ +P +P +L+ +    C  L 
Sbjct: 582  LSSLQELLLIGNLFRSIPAGINQLSRLRLLVLSNCQELRQIPVLPSSLRVLDVQSCKRLE 641

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS-Q 358
            T  G L       ++ NC  SL         I  L    ++  +  P  +++++   S  
Sbjct: 642  TSSGLLW-----SSLFNCFKSL---------IQDLE--CKIYPLEKPFARVNLIISESCG 685

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECS 418
            IP W  +  +G+ +    P   Y  + ++GF +  V+              YP   L+  
Sbjct: 686  IPNWISHHKKGAEVVAKLPQNWYKNDDLLGFVLYSVY--------------YP---LDNE 728

Query: 419  MDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNL-IRLSFRSISDP-TWKVK 476
             + + E    YF  ++G           L   GH  QF   L    SF     P  W + 
Sbjct: 729  SEETLENDATYF--EYG-----------LTLRGHEIQFVDKLQFYPSFYGNVVPYMWMI- 774

Query: 477  RCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSSQWKWLKP 536
               ++P Y                       E+   +  +      AS  G  + K +K 
Sbjct: 775  ---YYPKY-----------------------EIGEKYHSNKWRQLTASFCGYLRGKAVKV 808

Query: 537  VEVAVVMIMMRNHNLRDLDNSNEGQSLLN------RGTVEDLWYNSRAYDVFDDMPTKER 590
             E  + +I   +H        N G+++++      +  V+ LW      +  +++PT E 
Sbjct: 809  EECGIHLIYAHDHE------QNHGKAMISTVCRECQEDVQSLWKLCLKGNAINELPTIEC 862

Query: 591  ASHL-MCCINSMVSQAKAISQQGQFVKMISVD-SGCMSCYKKWGRQTVRRQSPQEPGNCS 648
               L   C+    +     S   +   + ++  SGC          +  R  P       
Sbjct: 863  PHKLNRLCLRECKNLELLPSSICELKSLTTLFCSGC----------SRLRSFP------- 905

Query: 649  RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
               E  ++  +I ++  DGT I EL  +I+ L GL  L L  C NL  LP  I  LK L 
Sbjct: 906  ---EILEDVENIRELHLDGTAIEELPASIQYLRGLQHLNLADCSNLVSLPEAICKLKTLK 962

Query: 709  TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
             LN+S  +K   FPE   S        LEG    GL  S            KDC    S+
Sbjct: 963  ILNVSFCTKLERFPENLRSLQC-----LEGLYASGLNLS------------KDC--FSSI 1003

Query: 769  PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR-------LSSWNRPKMQNDFDCV 821
             + I  L  LR++  S C  L  V E    +  L+V        LSS +     + F C 
Sbjct: 1004 LAGIIQLSKLRVLELSHCQGLLQVPELPPSLRVLDVHSCTCLEVLSSPSCLLGVSLFKCF 1063

Query: 822  EQSAVETVTKLAKAEL-LRDSD 842
            + +  +   K +  E+ LRDSD
Sbjct: 1064 KSTIEDLKYKSSSNEVFLRDSD 1085



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 160/330 (48%), Gaps = 42/330 (12%)

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ++ L KL L G +I E+P+ IE    L  L L ECKNL  LPSSI  LKSL TL  SGC 
Sbjct: 841  VQSLWKLCLKGNAINELPT-IECPHKLNRLCLRECKNLELLPSSICELKSLTTLFCSGCS 899

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            +L + P+ L  VE++ EL + GTAI    +SI  ++ L+ L  + C+             
Sbjct: 900  RLRSFPEILEDVENIRELHLDGTAIEELPASIQYLRGLQHLNLADCS------------- 946

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY-----LN 249
             NL+        L    +  V   TKL+           P ++ +L  L+ LY     L+
Sbjct: 947  -NLVSLPEAICKLKTLKILNVSFCTKLE---------RFPENLRSLQCLEGLYASGLNLS 996

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
            ++ F ++ A I  L  L  LEL  C+ L  +P++PP+L+ +  + C+ L  L  +   C 
Sbjct: 997  KDCFSSILAGIIQLSKLRVLELSHCQGLLQVPELPPSLRVLDVHSCTCLEVL--SSPSCL 1054

Query: 310  SKYTIINCIDSL--KLLRKNGLAISMLREYLELQAVSD-PGHKLSIVFPGS-QIPKWFMY 365
               ++  C  S    L  K+      LR+       SD  G+ + IV PGS  IPKW   
Sbjct: 1055 LGVSLFKCFKSTIEDLKYKSSSNEVFLRD-------SDFIGNGVCIVVPGSCGIPKWIRN 1107

Query: 366  QNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
            Q EG+ IT+  P   Y  N  +G AICCV+
Sbjct: 1108 QREGNHITMDLPQNCYENNDFLGIAICCVY 1137



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 75/118 (63%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
            L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L ++HL GTAI+ LP
Sbjct: 1311 LCLRECKNLESLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELP 1370

Query: 746  ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +SIE L+   + NL+ CKNL +LP +I  LR L  +  + CSKL  + + LG+++SL+
Sbjct: 1371 SSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKLPQNLGRLQSLK 1428



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 7/187 (3%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +M++L  L+L+GT+I E+PSSIE L  L++L L+ CKNL +LP +I +L+ L  L ++
Sbjct: 1350 LENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVN 1409

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTS----IAEVPSSIELLPGLELLYLNECKNLVRLP 116
             CSKL K PQ +  ++ L  L   G +         S +  L  L+L+Y    + +V   
Sbjct: 1410 YCSKLHKLPQNLGRLQSLKCLRARGLNSRCCQLLSLSGLCSLKELDLIYSKLMQGVVL-- 1467

Query: 117  SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
            S I  L SL+ ++L  C   E  +P  + ++ SL+EL + G   R   + I  +  LR L
Sbjct: 1468 SDICCLYSLEVVDLRVCGIDEGGIPTEICQLSSLQELFLFGNLFRSIPAGINQLSRLRLL 1527

Query: 176  YFSGCNE 182
                C E
Sbjct: 1528 VLGNCQE 1534



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 37/283 (13%)

Query: 217  SLTKLDLSDCGLGEAAIPSDIDNLHSLKELY-----LNRNNFVTLPASISGLLNLEELEL 271
            +L  L++S C   E   P ++ +L  L+ LY     L+++ F ++ A I  L  L  LEL
Sbjct: 1776 TLKILNVSFCTKLER-FPENLRSLQCLEGLYASGLNLSKDCFSSILAGIIQLSKLRVLEL 1834

Query: 272  EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAI 331
              C+ L  +P+ PP+L+ +  + C+ L TL       +  +++  C              
Sbjct: 1835 SHCQGLLQVPEFPPSLRVLDVHSCTCLETLSSPSS--QLGFSLFKCFK------------ 1880

Query: 332  SMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
            SM+ E+   +  S     + +V  G+  IP+W     +GS IT+   + LY  +  +GFA
Sbjct: 1881 SMIEEF---ECGSYWNKAIRVVISGNDGIPEWISQPKKGSQITIELSTDLYRKDGFLGFA 1937

Query: 391  ICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVV--SDHLWLLFLP 448
            +  VF +P       +   +   EL    D S   H    R     +   S  + + + P
Sbjct: 1938 LYSVF-IP-------MACGWLNCELNICGDQSECCHVDDVRSYCCRICGESSQMCVTYYP 1989

Query: 449  R---HGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEV 488
            +       W  E   ++ SF S+     +VK CGFH IY  +V
Sbjct: 1990 KVVIGNQYWSNEWRRLKASFHSLDGTPVEVKECGFHLIYTPDV 2032



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 30/226 (13%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           DL  L L  ++I  +      L  L  + LN+ + L+ LP+  N + +L+ LNLSGC  L
Sbjct: 321 DLVFLGLSNSNIKRLWKGNMCLRNLRYINLNDSQQLIELPNFSN-VPNLEELNLSGCIIL 379

Query: 137 ENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
             V   + +    + L +     +    + I+  K+L+SL+ S C++             
Sbjct: 380 LKVHTHIRRASEFDTLCLRECKNLESLPTIIWEFKSLKSLFCSDCSQ------------- 426

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFV 254
                    +      L  + +L +L L+   + E  +PS I+ L+ L+ L L R  N V
Sbjct: 427 ---------LQYFPEILETMENLRQLHLNGTAIKE--LPSSIERLNRLQVLNLGRCKNLV 475

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---FVRANGCSS 297
           TLP SI  L  LE+L +  C +L  LPQ    LQ    +RA G +S
Sbjct: 476 TLPESICNLRFLEDLNVNFCSKLHKLPQNLGRLQSLKRLRARGLNS 521



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 11/85 (12%)

Query: 646  NCSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
            +CS+L      FP+I+       Q+  +GT I+EL  +IE L  L  L L  CKNL  LP
Sbjct: 1339 DCSQL----QYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQVLNLERCKNLVTLP 1394

Query: 699  RTISALKYLSTLNLSGLSKFREFPE 723
             +I  L++L  LN++  SK  + P+
Sbjct: 1395 ESICNLRFLEDLNVNYCSKLHKLPQ 1419



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 8/102 (7%)

Query: 43   SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAE-----VPSSIEL 97
            +LP    +LK L+ L +S C+KL++FP+ + S++ L  LY  G ++++     + + I  
Sbjct: 1766 NLPEAFCNLKTLKILNVSFCTKLERFPENLRSLQCLEGLYASGLNLSKDCFSSILAGIIQ 1825

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            L  L +L L+ C+ L+++P       SL+ L++  C  LE +
Sbjct: 1826 LSKLRVLELSHCQGLLQVPEFP---PSLRVLDVHSCTCLETL 1864



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS-----IF 167
            + LP +   LK+LK LN+S C KLE  P+ L  ++ LE L  SG  + +   S     I 
Sbjct: 1765 LNLPEAFCNLKTLKILNVSFCTKLERFPENLRSLQCLEGLYASGLNLSKDCFSSILAGII 1824

Query: 168  LMKNLRSLYFSGC 180
             +  LR L  S C
Sbjct: 1825 QLSKLRVLELSHC 1837


>gi|399920221|gb|AFP55568.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1143

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 168/521 (32%), Positives = 258/521 (49%), Gaps = 44/521 (8%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L + I  L  L++++LS  + L + P     +  L KL L+G  S+ ++  SI  L
Sbjct: 625  NIDHLWIGIKYLSNLKSIDLSYSTNLTRTPDFTG-IPYLEKLILEGCISLVKIHPSIASL 683

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L++     CK++  LP  ++ ++ L+T ++SGC KL+ +P+ +G+ + L  L + GTA
Sbjct: 684  KRLKIWNFRNCKSIKSLPGEVD-MEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGTA 742

Query: 159  IRRPTSSIFLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPSL 212
            + +  S   L ++L  L  SG    E P S     +L  + LG    KS  P+  +L SL
Sbjct: 743  VEKLPSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSLGLFPRKSPHPLTPLLASL 802

Query: 213  TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
                SLT+L L+DC L E  +P+DI +L SL+ L L  NNFV+LPASI  L  L  + +E
Sbjct: 803  KHFSSLTELKLNDCNLCEGELPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRYINVE 862

Query: 273  DCKRLQSLPQIPPNLQF--VRANGCSSLVTLFGALKLCR---SKYTIINCIDSLKLLRKN 327
            +CKRLQ LP+ P    +  V  N C+SL        LCR    +    NC+ ++     +
Sbjct: 863  NCKRLQQLPE-PSARGYLSVNTNNCTSLQVFPDLPGLCRLLAFRLCCSNCLSTVGNQDAS 921

Query: 328  GLAISMLREYLEL-QAVSDPGHKL-----SIVFPGSQIPKWFMYQNEGSSITVTRPSYLY 381
                S+L+  +E+   V  P          ++ PGS+IP+WF  Q+ G S+T   PS   
Sbjct: 922  YFIYSVLKRLVEVGMMVHMPETPRCFPLPELLIPGSEIPEWFNNQSVGDSVTEKLPSDAC 981

Query: 382  NVNKVVGFAICCVFQVPKHSTGT--YLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVS 439
            N +K +GFA+C +   P + +     LF +Y  +   C+          YF  K   +VS
Sbjct: 982  NYSKWIGFAVCALIGPPDNPSAASRILFINYRWNSYVCTPIA-------YFEVK--QIVS 1032

Query: 440  DHLWLLFLPRHGHN-----WQFESNLIRLSFRS---ISDPTWKVKRCGFHPIYMHEVEEF 491
            DHL LLFLP  G        +   N +   F S          +K+CG   +Y H+VEE 
Sbjct: 1033 DHLVLLFLPSEGFRKPENCLEDTCNEVEFVFGSKGGFYSDLHIIKKCGARALYEHDVEEL 1092

Query: 492  DETTKQSTRFTSCNLNEVHHDFVGSNMEVAQ---ASGSGSS 529
                 QS + +S +LNE   +  G+ ++  Q    SG G S
Sbjct: 1093 ISKMNQS-KISSISLNEAVDEQEGAMVKATQEAATSGRGGS 1132



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 25/135 (18%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           ++I  L + I+ L  L  + L+   NL R P   + + YL  L L G             
Sbjct: 624 SNIDHLWIGIKYLSNLKSIDLSYSTNLTRTP-DFTGIPYLEKLILEGCI----------- 671

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L++IH           SI  L    + N ++CK++KSLP  ++ +  L     SGCS
Sbjct: 672 --SLVKIH----------PSIASLKRLKIWNFRNCKSIKSLPGEVD-MEFLETFDVSGCS 718

Query: 788 KLKNVTETLGKVESL 802
           KLK + E +G+ + L
Sbjct: 719 KLKMIPEFVGQTKRL 733



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
              CK+++ LP  +  +++L T ++SG SK +  PE      +L  + L GTA+  LP S
Sbjct: 691 FRNCKSIKSLPGEVD-MEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGTAVEKLP-S 748

Query: 748 IELLSGNIL 756
           IE LS +++
Sbjct: 749 IEHLSESLV 757


>gi|147769268|emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/283 (46%), Positives = 180/283 (63%), Gaps = 5/283 (1%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-ASMEDLSKLYLDGTSI 88
           L  + L GC +L  L  +I +LK L  L L GCSKL+KFP++V  ++EDLS + L+GT+I
Sbjct: 650 LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 709

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            E+PSSI  L  L LL L  CK L  LP SI  L SL+TL LSGC KL+ +PD LG+++ 
Sbjct: 710 RELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 769

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
           L EL V GT I+   SSI L+ NL+ L  +GC +   S SW+L   F   G       L 
Sbjct: 770 LVELHVDGTGIKEVPSSINLLTNLQELSLAGC-KGWESKSWNLAFSF---GSWPTLEPLR 825

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           LP L+G+ SL  L+LSDC L E A+P D+ +L SL+ L L+RN+F+T+PA++SGL  L  
Sbjct: 826 LPRLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPANLSGLSRLHV 885

Query: 269 LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
           L L  CK LQSLP++P +++++ A  C+SL T   +   C SK
Sbjct: 886 LMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSK 928



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 245/555 (44%), Gaps = 122/555 (21%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +++DLS + L+GT+I E+PSSI  L  L LL L+ CK L+SLP +I  L  L+TL LSG
Sbjct: 694  GNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSG 753

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-------NL-- 112
            CSKLKK P  +  ++ L +L++DGT I EVPSSI LL  L+ L L  CK       NL  
Sbjct: 754  CSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAF 813

Query: 113  ----------VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
                      +RLP  ++GL SLK LNLS C  LE              L +  +++   
Sbjct: 814  SFGSWPTLEPLRLP-RLSGLYSLKILNLSDCNLLEGA------------LPIDLSSLSSL 860

Query: 163  TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
                    +                   + +P NL G S   V LMLP    + SL +L 
Sbjct: 861  EMLDLSRNSF------------------ITIPANLSGLSRLHV-LMLPYCKSLQSLPEL- 900

Query: 223  LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP-ASISGLLNLEELELEDCKRL---- 277
                       PS I  L++  E   +   F   P A  S       LE  +C RL    
Sbjct: 901  -----------PSSIRYLNA--EACTSLETFSCSPSACTSKRYGGLRLEFSNCFRLMENE 947

Query: 278  ---------------QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK------YTIIN 316
                           QSLP++P +++++ A  C+SL T   +   C SK          N
Sbjct: 948  HSRLHVLMLPYCKSLQSLPELPSSIRYLNAEACTSLETFSCSPSACTSKRYGGLRLEFSN 1007

Query: 317  CI--------DSLKLLRKNGLAISMLREYLE--LQAVSDPGHKL-SIVFPGSQIPKWFMY 365
            C         DS+K +      ++ + ++L+  L    D  H L   + PGS+IP+WF+ 
Sbjct: 1008 CFRLMENEHNDSVKHILLGIQLLASIPKFLQPFLGGFIDGPHNLYDAIVPGSRIPEWFVD 1067

Query: 366  QNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY---LFHSYPAHELECSMDGS 422
            Q+ GSS+TV  P + YN  K++G A+C V      +TG     +    P    +CS    
Sbjct: 1068 QSTGSSVTVELPPHWYNT-KLMGMAVCAVIG----ATGVIDPTIEEWRPQIYFKCSSVIY 1122

Query: 423  GEGHYIYFRGKFGHVVSDHLWLLFLP---RHGHNWQFESNL--IRLSFRSISDPTWKVKR 477
                 I  R     +  DH W  +L     HG    F  +   + +SF S  +   +VK+
Sbjct: 1123 QGDDAIMSRS----MKDDHTWFRYLSLCWLHGRTPPFGKSRGSMVVSFGSWEEKL-EVKK 1177

Query: 478  CGFHPIYMHEVEEFD 492
            CG   +Y  E EE D
Sbjct: 1178 CGVRLVY--EGEEKD 1190



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-DQLLEIHLEGTAI 741
           L ++ LNGC +L +L  +I ALK L  LNL G SK  +FPE+     + L  I LEGTAI
Sbjct: 650 LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAI 709

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           R LP+SI  L+  +L NL++CK L SLP +I  L SL+ +  SGCSKLK + + LG+++ 
Sbjct: 710 RELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQC 769

Query: 802 L 802
           L
Sbjct: 770 L 770



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 107/241 (44%), Gaps = 28/241 (11%)

Query: 41  LSSLPVTISSLKCLRTLELSGC-SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
           L SLP      K    +EL+ C S LK+  +   + E L  + L  +            P
Sbjct: 592 LKSLPSIFHPKK---LVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAP 648

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL-GKVESLEELDVSGTA 158
            L  + LN C +LV+L  SI  LK L  LNL GC KLE  P+ + G +E L  + + GTA
Sbjct: 649 KLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTA 708

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           IR   SSI  +  L  L    C +                      +A +  S+  + SL
Sbjct: 709 IRELPSSIGGLNRLVLLNLRNCKK----------------------LASLPQSICELISL 746

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
             L LS C      +P D+  L  L EL+++      +P+SI+ L NL+EL L  CK  +
Sbjct: 747 QTLTLSGCS-KLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWE 805

Query: 279 S 279
           S
Sbjct: 806 S 806



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 12/129 (9%)

Query: 647 CSRLWEEADEFPDIVQ--------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           CS+L    ++FP++VQ        +  +GT IREL  +I  L  LV L L  CK L  LP
Sbjct: 682 CSKL----EKFPEVVQGNLEDLSGISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLP 737

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
           ++I  L  L TL LSG SK ++ P+       L+E+H++GT I+ +P+SI LL+     +
Sbjct: 738 QSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELS 797

Query: 759 LKDCKNLKS 767
           L  CK  +S
Sbjct: 798 LAGCKGWES 806



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 24/157 (15%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L +L++DGT I EVPSSI LLT L+ L+L GCK   S                 
Sbjct: 764 LGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAFSFGSWPTLEP 823

Query: 44  --LPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
             LP  +S L  L+ L LS C+ L+   P  ++S+  L  L L   S   +P+++  L  
Sbjct: 824 LRLP-RLSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFITIPANLSGLSR 882

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
           L +L L  CK+L  LP   +   S++ LN   C  LE
Sbjct: 883 LHVLMLPYCKSLQSLPELPS---SIRYLNAEACTSLE 916



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 27/170 (15%)

Query: 647 CSRLWEEADEFPDI---VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLE-------- 695
           CS+L +  D+   +   V++  DGT I+E+  +I LL  L +L+L GCK  E        
Sbjct: 754 CSKLKKLPDDLGRLQCLVELHVDGTGIKEVPSSINLLTNLQELSLAGCKGWESKSWNLAF 813

Query: 696 -----------RLPRTISALKYLSTLNLSGLSKFR-EFPEITSSRDQLLEIHLEGTAIRG 743
                      RLPR +S L  L  LNLS  +      P   SS   L  + L   +   
Sbjct: 814 SFGSWPTLEPLRLPR-LSGLYSLKILNLSDCNLLEGALPIDLSSLSSLEMLDLSRNSFIT 872

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           +PA++  LS   +  L  CK+L+SLP   +   S+R +    C+ L+  +
Sbjct: 873 IPANLSGLSRLHVLMLPYCKSLQSLPELPS---SIRYLNAEACTSLETFS 919


>gi|408537100|gb|AFU75203.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/288 (45%), Positives = 187/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L LL LK C+NL +LP  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVLLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  LPSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L F GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMKLLKNLKHLSFRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGISSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P ASIS L  L  L L  C+ L+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASISHLTQLRALALAGCRMLESLPELPPSIKGIYADECTSLMSI 290



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK + FP
Sbjct: 7   VLEECTSLVEINFSIGDLGKLVLLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS++LL  L+ L    C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMKLLKNLKHLSFRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +SI 
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGISSNLGFLPSLEGLILDGNNFSSIPAASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 HLTQLRALALAGC 263



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 24/204 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + ELS ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S++LL      + + C 
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMKLLKNLKHLSFRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     ++  LG + SLE  +  
Sbjct: 178 ALSSQVSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGISSNLGFLPSLEGLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSSIPAASISHLTQL 255


>gi|105922482|gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/403 (37%), Positives = 218/403 (54%), Gaps = 49/403 (12%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
            LK LR ++L     L K P     + +L KL L+G   + ++  SI +L GL  L L +C
Sbjct: 655  LKLLRAIDLRHSRNLIKTPDF-RQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDC 713

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
              L  LP++I  LK+L+ LNL GC KLE +P+ LG V +LEELDV  TAI +  S+  L 
Sbjct: 714  VKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGLW 773

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
            K L+ L F GC + PA  SW+    F  L ++ CP+ LML SL+ + SLTKL+LS+C L 
Sbjct: 774  KKLKVLSFDGC-KGPAPKSWYSLFSFRSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLM 832

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
            E  +P D+    SL+EL L  NNFV +P+SIS L  L+ L L +CK+LQSLP +P  L++
Sbjct: 833  EGELPDDMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEY 892

Query: 290  VRANGCSSLVTLFGALKLC-RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH 348
            +  +GC+SL TL    + C RSK+  +  ++  +L    G  ISM               
Sbjct: 893  LGVDGCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQG-NISM--------------- 936

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVT-RPSYLYNVNKVVGFAICCVFQ----------- 396
                   GS+IP WF +++ G S+T+   P   ++ +K +G A+C  F+           
Sbjct: 937  -------GSEIPSWFHHKSVGHSLTIRLLPYEHWSSSKWMGLAVCAFFEELDCGDSCLIT 989

Query: 397  ----VPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYF-RGKF 434
                +    + +Y F  YP    E S   S +  +I+F RGKF
Sbjct: 990  LNFDIKGFKSRSY-FLEYP----EGSTFTSNQVFFIFFPRGKF 1027



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 113/241 (46%), Gaps = 29/241 (12%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G   + ++  SI +L GL  L LK C  L+ LP  I  LK LR L L GC K
Sbjct: 680 NLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFK 739

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+K P+++ ++ +L +L +  T+I ++PS+  L   L++L  + CK     P S   L S
Sbjct: 740 LEKLPEMLGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKGPA--PKSWYSLFS 797

Query: 125 LKT-----------------------LNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIR 160
            ++                       LNLS C  +E  +PD +    SLEELD+ G    
Sbjct: 798 FRSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLIGNNFV 857

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK 220
           R  SSI  +  L+SL    C +  +       L +  LG   C     LP+L   C+ +K
Sbjct: 858 RIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEY--LGVDGCASLGTLPNLFEECARSK 915

Query: 221 L 221
            
Sbjct: 916 F 916



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 12/187 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++ +L +L +  T+IT++PS+  L   L++L+  GCK  +  P +  SL   R+L  +
Sbjct: 747 LGNVINLEELDVGRTAITQLPSTFGLWKKLKVLSFDGCKGPA--PKSWYSLFSFRSLPRN 804

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSI--AEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            C  +      ++++  L+KL L   ++   E+P  +   P LE L L    N VR+PSS
Sbjct: 805 PCP-ITLMLSSLSTLYSLTKLNLSNCNLMEGELPDDMSCFPSLEELDLI-GNNFVRIPSS 862

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF---LMKNLRSL 175
           I+ L  LK+L L  C KL+++PD   +   LE L V G A      ++F         SL
Sbjct: 863 ISRLSKLKSLRLGNCKKLQSLPDLPSR---LEYLGVDGCASLGTLPNLFEECARSKFLSL 919

Query: 176 YFSGCNE 182
            F  C+E
Sbjct: 920 IFMNCSE 926



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
           + + A+    + NL     FR+ P        L +++LEG   +  +  SI +L G +  
Sbjct: 656 KLLRAIDLRHSRNLIKTPDFRQVP-------NLEKLNLEGCRKLVKIDDSIGILKGLVFL 708

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           NLKDC  L  LP+ I  L++LR++   GC KL+ + E LG V +LE
Sbjct: 709 NLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLE 754



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I +L GLV L L  C  L  LP  I  LK L  LNL G  K  + PE+  +   L E+ 
Sbjct: 698 SIGILKGLVFLNLKDCVKLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELD 757

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           +  TAI  LP++  L     + +   CK     P +   L S R +  + C
Sbjct: 758 VGRTAITQLPSTFGLWKKLKVLSFDGCKG--PAPKSWYSLFSFRSLPRNPC 806



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M+    L +L L G +   +PSSI  L+ L+ L L  CK L SLP   S L+    L + 
Sbjct: 840 MSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLE---YLGVD 896

Query: 61  GCSKLKKFPQIV---ASMEDLSKLYLDGTSIAEVPSSIEL 97
           GC+ L   P +    A  + LS ++++ + + +   +I +
Sbjct: 897 GCASLGTLPNLFEECARSKFLSLIFMNCSELTDYQGNISM 936


>gi|147799796|emb|CAN70507.1| hypothetical protein VITISV_024109 [Vitis vinifera]
          Length = 1350

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 227/508 (44%), Gaps = 109/508 (21%)

Query: 12   LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
              G+ + EVP  IE  + L+ L L+ C+NL+SLP +I   K L TL  SGCS+L+ FP+I
Sbjct: 931  FKGSDMNEVPI-IENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 989

Query: 72   VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            +  ME L KLYL+GT+I E+PSSI+ L GL+ L L  CKNLV LP SI  L S KTL +S
Sbjct: 990  LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1049

Query: 132  GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             C     +PD LG+++SLE L V                +L S+ F              
Sbjct: 1050 RCPNFNKLPDNLGRLQSLEYLFVG---------------HLDSMNF-------------- 1080

Query: 192  HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                             LPSL+G+CSL  L L DC L E   P      H  +       
Sbjct: 1081 ----------------QLPSLSGLCSLRTLKLQDCNLREFP-PVKSITYHQCR------- 1116

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
                +P  IS L NL++L+L  CK LQ +P++P  L+ + A+ C+SL  L     L  S 
Sbjct: 1117 ----IPDGISQLYNLKDLDLGHCKMLQHIPELPSRLRCLDAHHCTSLENLSSRSNLLWS- 1171

Query: 312  YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
             ++  C  S    R  G      RE+ +          ++ +     IP+W  +Q  G  
Sbjct: 1172 -SLFKCFKS----RIQG------REFRKTL--------ITFIAESYGIPEWISHQKSGFK 1212

Query: 372  ITVTRPSYLYNVNKVVGFAICCVFQVP-----------------KHSTGTYLFHSYPAHE 414
            IT+  P   Y  +  +GF +C +  VP                  H +  + + S+   E
Sbjct: 1213 ITMKLPWSWYENDDFLGFVLCSL-HVPLDTETAKHRSFNCKLNFDHDSAYFSYQSHQFCE 1271

Query: 415  LECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWK 474
                 D S +G  IY+                +P+  H+ ++ +     +      P  K
Sbjct: 1272 FCYDEDASSQGCLIYYPKS------------SIPKRYHSNEWRTLNASFNVYFGVKPV-K 1318

Query: 475  VKRCGFHPIYMHEVEEFDETTKQSTRFT 502
            V RCGFH +Y H+ E+ + T  Q    T
Sbjct: 1319 VARCGFHFLYAHDYEQNNLTIVQRKAVT 1346



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 41/324 (12%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           ++L +L L  ++I +V    +L   L ++ L+   +L R+P   + + +L+ L L GC  
Sbjct: 469 KNLVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIPD-FSSVPNLEILTLKGC-T 526

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
             +   + G +     LD+SGTAI    SSI  +  L++L    C            L  
Sbjct: 527 TRDFQKSKGDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLLQEC------------LKL 574

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
           + +    C ++          SL  LDL  C + E  IPSDI +L SL++L L R +F +
Sbjct: 575 HQVPNHICHLS----------SLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSS 624

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTII 315
           +P +I+ L  LE L L  C  L+ +P++P  L+ + A+G +   +    L L    ++++
Sbjct: 625 IPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRAPFLPL----HSLV 680

Query: 316 NCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITV 374
           NC    +  ++   + S           S       IV P +  IP+W MY++       
Sbjct: 681 NCFSWAQDSKRTSFSDS-----------SYHAKGTCIVLPRTDGIPEWIMYRSTIYFTKT 729

Query: 375 TRPSYLYNVNKVVGFAICCVFQVP 398
             P   +  N+ +GFAICCV+ VP
Sbjct: 730 KLPQNWHQNNEFLGFAICCVY-VP 752



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ + IE    L  L L  C+NL  LP +I   K L+TL+ SG S+   FPEI  
Sbjct: 933  GSDMNEVPI-IENPSELDSLCLQDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 991

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L +++L GTAI+ +P+SI+ L G     L++CKNL +LP +I  L S + +  S C
Sbjct: 992  DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1051

Query: 787  SKLKNVTETLGKVESLE 803
                 + + LG+++SLE
Sbjct: 1052 PNFNKLPDNLGRLQSLE 1068



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 17/165 (10%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  LYL+GT+I E+PSSI+ L GL+ L L+ CKNL +LP +I +L   +TL +S
Sbjct: 990  LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1049

Query: 61   GCSKLKKFPQIVASMEDLSKLY---LDGTSIAEVPSSIELLPGLELLYLNECK------- 110
             C    K P  +  ++ L  L+   LD  +  ++P S+  L  L  L L +C        
Sbjct: 1050 RCPNFNKLPDNLGRLQSLEYLFVGHLDSMNF-QLP-SLSGLCSLRTLKLQDCNLREFPPV 1107

Query: 111  -----NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLE 150
                 +  R+P  I+ L +LK L+L  C  L+++P+   ++  L+
Sbjct: 1108 KSITYHQCRIPDGISQLYNLKDLDLGHCKMLQHIPELPSRLRCLD 1152



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 3/178 (1%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K+L +L L  ++I +V    +L   L ++ L    +L  +P   SS+  L  L L GC+ 
Sbjct: 469 KNLVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIP-DFSSVPNLEILTLKGCTT 527

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            + F +    M +   L L GT+I ++PSSI  L GL+ L L EC  L ++P+ I  L S
Sbjct: 528 -RDFQKSKGDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQVPNHICHLSS 586

Query: 125 LKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           LK L+L  C  +E  +P  +  + SL++L++         ++I  +  L  L  S CN
Sbjct: 587 LKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCN 644



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             M++   L L GT+I ++PSSI  L GL+ L L+ C  L  +P  I  L  L+ L+L  
Sbjct: 535 GDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQVPNHICHLSSLKVLDLGH 594

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 595 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 650



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 21/169 (12%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I+Q +        +GT I+E+  +I+ L GL  L L  CKNL  LP 
Sbjct: 980  CSQL----ESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPE 1035

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI----HLEGTAIRGLPASIELLSGNI 755
            +I  L    TL +S    F + P+    R Q LE     HL+    + LP+   L S   
Sbjct: 1036 SICNLTSFKTLVVSRCPNFNKLPD-NLGRLQSLEYLFVGHLDSMNFQ-LPSLSGLCSLRT 1093

Query: 756  LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE-TLGKVESLE 803
            L  L+DC NL+  P  +  +   +   P G S+L N+ +  LG  + L+
Sbjct: 1094 LK-LQDC-NLREFP-PVKSITYHQCRIPDGISQLYNLKDLDLGHCKMLQ 1139



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 11/180 (6%)

Query: 659 DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF 718
           ++V++    ++I+++    +L   L  + L+   +L+R+P   S++  L  L L G +  
Sbjct: 470 NLVELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLKRIP-DFSSVPNLEILTLKGCTT- 527

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           R+F +      +   + L GTAI  LP+SI  L+G     L++C  L  +P+ I  L SL
Sbjct: 528 RDFQKSKGDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQVPNHICHLSSL 587

Query: 779 RMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
           +++    C    N+ E  G + S    LSS  +  ++        S   T+ +L++ E+L
Sbjct: 588 KVLDLGHC----NIME--GGIPSDICHLSSLQKLNLERGH---FSSIPTTINQLSRLEVL 638


>gi|408537106|gb|AFU75206.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/288 (45%), Positives = 184/288 (63%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL ++P  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVSLNLKNCRNLKTIPKRIR-LEKLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LK LN+SGC 
Sbjct: 71  MNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILNVSGCV 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KLEN+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  V +   +L+G+CSL  LDLSDC + +  + S++  L SLK L L+ NNF 
Sbjct: 189 ----GQKS--VGVNFQNLSGLCSLIMLDLSDCNITDGGVLSNLGFLSSLKVLILDGNNFF 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L L  C RL+SLP++PP++  + A+ C+SL+++
Sbjct: 243 NIPGASISRLTRLKILALRGCGRLESLPELPPSITGIYAHDCTSLMSI 290



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L + T + E++ +I  L  LV L L  C+NL+ +P+ I  L+ L  L LSG SK + FP
Sbjct: 7   ILEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTIPKRIR-LEKLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+++ 
Sbjct: 66  EIEEKMNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILN 125

Query: 783 PSGCSKLKNVTE 794
            SGC KL+N+ +
Sbjct: 126 VSGCVKLENLPD 137



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 31/216 (14%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+ L +SGC 
Sbjct: 71  MNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILNVSGCV 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KL+  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L           
Sbjct: 131 KLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SL+ L + G      P 
Sbjct: 191 KSVGVNFQNLSGLCSLIMLDLSDC----NITDGGVLSNLGFLSSLKVLILDGNNFFNIPG 246

Query: 164 SSIFLMKNLRSLYFSGCNE-------PPASASWHLH 192
           +SI  +  L+ L   GC         PP+    + H
Sbjct: 247 ASISRLTRLKILALRGCGRLESLPELPPSITGIYAH 282



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 24/204 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L  LN+SG  K    P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKILNVSGCVKLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCSKLK-NVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     V   LG + SL+V +  
Sbjct: 178 ALSSQVSSSSHGQKSVGVNFQNLSGLCSLIMLDLSDCNITDGGVLSNLGFLSSLKVLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFFNIPGASISRLTRL 255


>gi|408537082|gb|AFU75194.1| nematode resistance-like protein, partial [Solanum stoloniferum]
          Length = 307

 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/288 (45%), Positives = 189/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL ++P  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILILSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+P+S+E   G+ ++ L+ CK+L  LPSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ LY  GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKAIYANECTSLMSI 290



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ +P+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILILSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  LPAS+E  SG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 24/197 (12%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+P+S+E  +G+ ++ L  CK+L SLP +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ LYL  C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLLKNLKHLYLRGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SLE L + G      P 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDC----NISDGGILSNLGFLPSLERLILDGNNFSNIPA 246

Query: 164 SSIFLMKNLRSLYFSGC 180
           +SI  +  L++L   GC
Sbjct: 247 ASISRLTRLKTLKLLGC 263



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + EL  ++E   G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNRLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTDTAIQTIPSSMSLL 165


>gi|408537110|gb|AFU75208.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/288 (45%), Positives = 187/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  +PSSI  LK LKTLN+SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P ASIS L  L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 112/193 (58%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L S+P +I  LKCL+TL +SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +SI 
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 RLTQLRALALAGC 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+S+PS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 24/204 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE +P +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESIPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     +   LG + SLE  +  
Sbjct: 178 ALSSQVSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSSIPAASISRLTQL 255



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L +LNL  C  L+ +P  + ++E+LE L +SG +
Sbjct: 1   PNLERLVLEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRI-RLENLEILVLSGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY    +     AS        ++  S C     +P S+  + 
Sbjct: 60  KLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGVGVINLSYCKHLESIPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  L++S C      +P D+  L  L+EL+       T+P+S+S L NL+ L L  C  
Sbjct: 120 CLKTLNVSGCS-KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|332330341|gb|AEE43927.1| TIR-NBS-LRR resistance protein muRdr1C [Rosa multiflora]
          Length = 1139

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 165/512 (32%), Positives = 250/512 (48%), Gaps = 38/512 (7%)

Query: 50   SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNE 108
            SL  L++++LS    L + P     +  L KL L+G  S+ ++  SI  L  L+      
Sbjct: 624  SLGNLKSIDLSDSINLTRTPDFTG-IPSLEKLILEGCISLVKIHPSIASLKRLKFWNFRN 682

Query: 109  CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-F 167
            CK++  LP  ++ ++ L+T ++SGC KL+ +P+ +G+ + L  L + GTA+ +  SSI  
Sbjct: 683  CKSIKSLPGEVD-MEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGTAVEKLPSSIEH 741

Query: 168  LMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPSLTGVCSLTKL 221
            L ++L  L  SG    E P S     +L  +  G    KS  P+  +L SL    SL  L
Sbjct: 742  LSESLVELDLSGIVIREQPYSRFLKQNLIASSFGLFPRKSPHPLLPLLASLKHFSSLRTL 801

Query: 222  DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
             L+DC L E  IP+DI +L SLK L L  NNFV+LPASI  L  L    +E+C +LQ LP
Sbjct: 802  KLNDCNLCEGEIPNDIGSLSSLKRLELRGNNFVSLPASIHLLSKLTYFGVENCTKLQQLP 861

Query: 282  QIP-PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL 340
             +P  +   V  N C+SL        L R     ++C + L     +    S+L+ ++E+
Sbjct: 862  ALPVSDYLNVLTNNCTSLQVFPDPPDLSRLSEFFLDCSNCLSCQDSSYFLYSVLKRWIEI 921

Query: 341  QAVS-------------DPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVV 387
            Q +S              P   +  V PGS+IP+WF  Q+ G  +T   PS   N +K +
Sbjct: 922  QVLSRCDMMVHMQETNRRPLEFVDFVIPGSEIPEWFNNQSVGDRVTEKLPSDACN-SKWI 980

Query: 388  GFAICCVFQVPKHSTGTYL---FHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWL 444
            GFA+C +  VP+ +    L   F     + +EC  +  G G ++         VSDHLWL
Sbjct: 981  GFAVCALI-VPQDNPSALLERPFLDPDTYGIECYWNDYGIG-FVGLVVPVKQFVSDHLWL 1038

Query: 445  LFL--PRHGHNWQFESNLIRLSFRSI-SDPTWKVKRCGFHPIYMHEVEEF----DETTKQ 497
            L L  P        E N +    R++ ++   KVK+CG   +Y H+VEE     +++   
Sbjct: 1039 LVLLSPFRKPENCLEVNFVFEITRAVGNNRGMKVKKCGVRALYEHDVEELISKMNQSKSS 1098

Query: 498  STRFTSCNLNEVHHDFVGSNMEVAQASGSGSS 529
            S       ++E     V +  E A  SGSG S
Sbjct: 1099 SISLYEEGMDEQEGAMVKAKHEAA-TSGSGGS 1129



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
              CK+++ LP  +  +++L T ++SG SK +  PE      +L  + L GTA+  LP+S
Sbjct: 680 FRNCKSIKSLPGEVD-MEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLGGTAVEKLPSS 738

Query: 748 IELLSGNIL 756
           IE LS +++
Sbjct: 739 IEHLSESLV 747



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 36/173 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELL-----------------------------TGLE 31
           +   K LS L L GT++ ++PSSIE L                             +   
Sbjct: 716 VGQTKRLSRLCLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSFG 775

Query: 32  LLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAE 90
           L   K    L  L  ++     LRTL+L+ C+  + + P  + S+  L +L L G +   
Sbjct: 776 LFPRKSPHPLLPLLASLKHFSSLRTLKLNDCNLCEGEIPNDIGSLSSLKRLELRGNNFVS 835

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL--SGCCKLENVPD 141
           +P+SI LL  L    +  C  L +LP+    L     LN+  + C  L+  PD
Sbjct: 836 LPASIHLLSKLTYFGVENCTKLQQLPA----LPVSDYLNVLTNNCTSLQVFPD 884



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLS---GLSKFREFPEITSSRDQLLEIHLEGT 739
           L +LTL    N++ L     +L  L +++LS    L++  +F  I S    +LE  +   
Sbjct: 605 LTELTLVH-SNIDHLWNGKKSLGNLKSIDLSDSINLTRTPDFTGIPSLEKLILEGCISLV 663

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            I    AS++ L      N ++CK++KSLP  ++ +  L     SGCSKLK + E +G+ 
Sbjct: 664 KIHPSIASLKRLK---FWNFRNCKSIKSLPGEVD-MEFLETFDVSGCSKLKMIPEFVGQT 719

Query: 800 ESL 802
           + L
Sbjct: 720 KRL 722


>gi|359493556|ref|XP_003634626.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1148

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 156/489 (31%), Positives = 238/489 (48%), Gaps = 64/489 (13%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ ++ SSIE+L  L +L L  CK L+SLP  +  L  L  L L+GCS L+KFP+I  S 
Sbjct: 662  SLDKIDSSIEVLKNLNVLDLSWCKKLTSLPSGMQYLDSLEILNLNGCSNLEKFPKIRWSF 721

Query: 76   -EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             + L ++ LDGT I E+P SI+ L  +++L + +CKN+  L SSI  LKSL+ L L GC 
Sbjct: 722  RKGLKEIRLDGTPIKELPFSIDDLTLVKILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCS 781

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
             LE  P+    + SLE L +S TAI+    +I  +K LR L+  GC+             
Sbjct: 782  NLETFPEITEDMASLELLSLSETAIKELPPTIQHLKQLRLLFVGGCSRLEKFPK------ 835

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                         +L SL    SL  LDLS+  L + AIP++I  L  L+ L L RNNF 
Sbjct: 836  -------------ILESLKD--SLINLDLSNRNLMDGAIPNEIWCLSLLEILNLRRNNFR 880

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
             +PA+I+ L  L  L++  CK LQ  P++P +L+ + A+ C+SL TL             
Sbjct: 881  HIPAAITQLRKLTLLKISHCKMLQGFPEVPLSLKHIEAHDCTSLETLSSPSS-------- 932

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK---LSIVFPGSQ-IPKWFMYQNEGS 370
                             S L ++ +     D   +     I+ PGS  IP W ++Q    
Sbjct: 933  --------------KLWSSLLQWFKSAKFQDHEAQPKCAGIMIPGSSGIPGWVLHQEMER 978

Query: 371  SITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY--- 427
             + +  P      N  +GF + C++Q   + T  YL +    H+ E S +    G +   
Sbjct: 979  EVRIELPMNWCKDNHFLGFVLFCLYQ--DNGTDPYLSYDLRLHDDEDSYEAVRRGWFGCQ 1036

Query: 428  -IYFRGKFGHVVSDHLWLLF-----LPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFH 481
              Y+   +  V+ D LW+ +     +P   H+ QF+   I+ SF +++     +K CG H
Sbjct: 1037 CDYYPNIYSGVL-DELWVTYHPKISIPEKYHSNQFKH--IQTSFSALTVGV--IKSCGIH 1091

Query: 482  PIYMHEVEE 490
             IY  + ++
Sbjct: 1092 LIYSQDHQQ 1100



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 101/178 (56%), Gaps = 2/178 (1%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K L ++ LDGT I E+P SI+ LT +++L++  CKN+ SL  +I SLK L+ L L GCS 
Sbjct: 723 KGLKEIRLDGTPIKELPFSIDDLTLVKILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCSN 782

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK- 123
           L+ FP+I   M  L  L L  T+I E+P +I+ L  L LL++  C  L + P  +  LK 
Sbjct: 783 LETFPEITEDMASLELLSLSETAIKELPPTIQHLKQLRLLFVGGCSRLEKFPKILESLKD 842

Query: 124 SLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           SL  L+LS    ++  +P+ +  +  LE L++     R   ++I  ++ L  L  S C
Sbjct: 843 SLINLDLSNRNLMDGAIPNEIWCLSLLEILNLRRNNFRHIPAAITQLRKLTLLKISHC 900



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 1/143 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L +   + ++  +IE+L  L  L L+ CK L  LP  +  L  L  LNL+G S   +FP
Sbjct: 656 ILHNCRSLDKIDSSIEVLKNLNVLDLSWCKKLTSLPSGMQYLDSLEILNLNGCSNLEKFP 715

Query: 723 EIT-SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           +I  S R  L EI L+GT I+ LP SI+ L+   + ++ DCKN++SL S+I  L+SL+++
Sbjct: 716 KIRWSFRKGLKEIRLDGTPIKELPFSIDDLTLVKILSMGDCKNVRSLLSSIGSLKSLQLL 775

Query: 782 YPSGCSKLKNVTETLGKVESLEV 804
           Y  GCS L+   E    + SLE+
Sbjct: 776 YLQGCSNLETFPEITEDMASLEL 798



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 31/156 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           MAS++ LS   L  T+I E+P +I+ L  L LL + GC                      
Sbjct: 793 MASLELLS---LSETAIKELPPTIQHLKQLRLLFVGGC---------------------- 827

Query: 61  GCSKLKKFPQIVASMED-LSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
             S+L+KFP+I+ S++D L  L L   ++ +  +P+ I  L  LE+L L    N   +P+
Sbjct: 828 --SRLEKFPKILESLKDSLINLDLSNRNLMDGAIPNEIWCLSLLEILNLRR-NNFRHIPA 884

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD 153
           +I  L+ L  L +S C  L+  P+    ++ +E  D
Sbjct: 885 AITQLRKLTLLKISHCKMLQGFPEVPLSLKHIEAHD 920


>gi|359493229|ref|XP_002264909.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 139/379 (36%), Positives = 196/379 (51%), Gaps = 70/379 (18%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + E+P  IE  + L+ L L+ CK L SLP +I   K L TL  SGCS+L+ FP+I+  
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M    KL LDGT+I E+PSSI+ L GL+ L L  C+NLV LP SI  L SL+TL +  C 
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KL  +P+ LG+++SLE L V               K+L S+                   
Sbjct: 1227 KLNKLPENLGRLQSLEYLYV---------------KDLDSM------------------- 1252

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                   +C     LPSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N F 
Sbjct: 1253 -------NC----QLPSLSGLCSLITLQLINCGLRE--IPSGIWHLSSLQHLSLRGNRFS 1299

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
            ++P  I+ L NL   +L  C+ LQ +P++P +L+++ A+ CSSL  L     L  S  ++
Sbjct: 1300 SIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWS--SL 1357

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSIT 373
              C              S ++E+       +   K+ +  PGS  IP W  +Q  GS IT
Sbjct: 1358 FKCFK------------SRIQEF-------EVNFKVQMFIPGSNGIPGWISHQKNGSKIT 1398

Query: 374  VTRPSYLYNVNKVVGFAIC 392
            +  P Y Y  +  +GFA+C
Sbjct: 1399 MRLPRYWYENDDFLGFALC 1417



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 189/383 (49%), Gaps = 42/383 (10%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P   E  + L  L   G  +L SLP    + K L  L L G S +K+  +      +L 
Sbjct: 589 LPRDFEFSSKLTYLHWDG-YSLESLPTNFHA-KDLVELILRG-SNIKQLWRGNKLHNELK 645

Query: 80  KLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
            + L+    + E+P     +P LE+L L  C  L  LP  I   K L+TL+  GC KL+ 
Sbjct: 646 VINLNYSVHLTEIPD-FSSVPNLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKR 704

Query: 139 VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLL 198
            P+  G +  L ELD+SGTAI+   SS+F  ++L++L                 L F + 
Sbjct: 705 FPEIKGNMRKLRELDLSGTAIKVLPSSLF--EHLKALEI---------------LSFRMS 747

Query: 199 GK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
            K +  P+ +   S     SL  LDLS C + E  IPSDI +L SLKEL L  N+F ++P
Sbjct: 748 SKLNKIPIDICCLS-----SLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIP 802

Query: 258 ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINC 317
           A+I+ L  L+ L L  C+ LQ +P++P +L+ + A+G +   +    L +    ++++NC
Sbjct: 803 ATINQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSNPTSSRASFLPV----HSLVNC 858

Query: 318 IDSLKLLRKNGLAISMLREYLELQAVSDPGHK-LSIVFPGSQ-IPKWFMYQNEGSSITVT 375
            +S        L  S   E     +VS  G K + IV PGS  +P+W M   +   I   
Sbjct: 859 FNS----EIQDLNCSSRNEVWSENSVSTYGSKGICIVLPGSSGVPEWIM---DDQGIATE 911

Query: 376 RPSYLYNVNKVVGFAICCVFQVP 398
            P      N+ +GFA+CCV+ VP
Sbjct: 912 LPQNWNQNNEFLGFALCCVY-VP 933



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D++EL + IE    L  L L  CK L+ LP +I   K L+TL+ SG S+   FPEI   
Sbjct: 1108 SDMKELPI-IENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILED 1166

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                 ++ L+GTAI+ +P+SI+ L G    NL  C+NL +LP +I  L SLR +    C 
Sbjct: 1167 MVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCP 1226

Query: 788  KLKNVTETLGKVESLE 803
            KL  + E LG+++SLE
Sbjct: 1227 KLNKLPENLGRLQSLE 1242



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 25/191 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M     L LDGT+I E+PSSI+ L GL+ L L  C+NL +LP +I +L  LRTL + 
Sbjct: 1164 LEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVV 1223

Query: 61   GCSKLKKFPQIVASMEDLSKLY------------------------LDGTSIAEVPSSIE 96
             C KL K P+ +  ++ L  LY                        L    + E+PS I 
Sbjct: 1224 SCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIW 1283

Query: 97   LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             L  L+ L L        +P  IN L +L   +LS C  L+++P+    +E L+    S 
Sbjct: 1284 HLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSS 1342

Query: 157  TAIRRPTSSIF 167
              I    S++ 
Sbjct: 1343 LEILSSPSTLL 1353



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC  LE LPR I   KYL TL+  G SK + FPEI  +  +L E+ L GTAI+ LP
Sbjct: 670 LTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLP 729

Query: 746 ASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +S+ E L    + + +    L  +P  I  L SL ++  S C    N+ E  G + S   
Sbjct: 730 SSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHC----NIME--GGIPSDIC 783

Query: 805 RLSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELL 838
            LSS     ++ NDF    +S   T+ +L++ ++L
Sbjct: 784 HLSSLKELNLKSNDF----RSIPATINQLSRLQVL 814



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 2/126 (1%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +M+ L +L L GT+I  +PSS+ E L  LE+L+ +    L+ +P+ I  L  L  L+LS
Sbjct: 710 GNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLS 769

Query: 61  GCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+ ++   P  +  +  L +L L       +P++I  L  L++L L+ C+NL  +P   
Sbjct: 770 HCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELP 829

Query: 120 NGLKSL 125
           + L+ L
Sbjct: 830 SSLRLL 835



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 36/193 (18%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I++ +        DGT I+E+  +I+ L GL  L L  C+NL  LP 
Sbjct: 1154 CSQL----ESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPE 1209

Query: 700  TISALKYLSTLNLSGLSKFREFPE---------------ITSSRDQ---------LLEIH 735
            +I  L  L TL +    K  + PE               + S   Q         L+ + 
Sbjct: 1210 SICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQ 1269

Query: 736  LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            L    +R +P+ I  LS     +L+      S+P  IN L +L +   S C  L+++ E 
Sbjct: 1270 LINCGLREIPSGIWHLSSLQHLSLRG-NRFSSIPDGINQLYNLIVFDLSHCQMLQHIPEL 1328

Query: 796  LGKVESLEVRLSS 808
               +E L+    S
Sbjct: 1329 PSSLEYLDAHQCS 1341



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 2/114 (1%)

Query: 667 GTDIREL-SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE-FPEI 724
           GT I+ L S   E L  L  L+      L ++P  I  L  L  L+LS  +      P  
Sbjct: 722 GTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSD 781

Query: 725 TSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
                 L E++L+    R +PA+I  LS   + NL  C+NL+ +P   + LR L
Sbjct: 782 ICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLL 835


>gi|399920225|gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 165/509 (32%), Positives = 239/509 (46%), Gaps = 109/509 (21%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G T++ ++  SI LL  L+L   + CK++ SLP  ++ ++ L T ++SGCSK
Sbjct: 652  NLEKLVLEGCTNLVKIHPSIALLKRLKLCNFRNCKSIKSLPSELN-MEFLETFDISGCSK 710

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            LKK P+ V   + LSKL L GT++ ++PSSIE L                          
Sbjct: 711  LKKIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLS------------------------- 745

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
                                  ESL ELD+SG  IR    S+F  +N R   F       
Sbjct: 746  ----------------------ESLVELDLSGIVIREQPHSLFFKQNFRVSSFG------ 777

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                     P     KS  P+  +L SL    SLT+L L+DC L E  IP+DI +L SL+
Sbjct: 778  -------LFP----RKSPHPLIPLLASLKQFSSLTELKLNDCNLCEGEIPNDIGSLSSLR 826

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP-NLQFVRANGCSSLVTLFG 303
            +L L  NNFV+LPASI  L  LE + +E+C RLQ LP++P  +   V+ + C+SL     
Sbjct: 827  KLELRGNNFVSLPASIHLLSKLEVITVENCTRLQQLPELPASDYILVKTDNCTSLQVFPD 886

Query: 304  ALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWF 363
               LCR        I + +L   N  ++   R  LE          L  V PG +IP+WF
Sbjct: 887  PPDLCR--------IGNFELTCMNCSSLETHRRSLEC---------LEFVIPGREIPEWF 929

Query: 364  MYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHEL----ECSM 419
              Q+ G S+T   PS   N +K +GFA+C +  VP+ +       ++P + L     C +
Sbjct: 930  NNQSVGDSVTEKLPSDACN-SKCIGFAVCALI-VPQDNPS-----AFPENPLLDPDTCRI 982

Query: 420  DGSGEGHYIY-----FRGKFGHVVSDHLWLLFLPRHGHNWQFESNL-IRLSF---RSI-S 469
                  + +Y     FR +    VSDHLWL  L      W+ E  L +   F   R++ +
Sbjct: 983  GCHWNNYGVYSLCQNFRVR--QFVSDHLWLFVL--RSLFWKLEKRLEVNFVFKITRAVGN 1038

Query: 470  DPTWKVKRCGFHPIYMHEVEEFDETTKQS 498
            +   KVK+CG   +Y ++ EE      QS
Sbjct: 1039 NRCIKVKKCGVRALYEYDKEELISKMNQS 1067



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 63/101 (62%), Gaps = 2/101 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
           FP++ +++ +G T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG 
Sbjct: 650 FPNLEKLVLEGCTNLVKIHPSIALLKRLKLCNFRNCKSIKSLPSELN-MEFLETFDISGC 708

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           SK ++ PE      +L ++ L GTA+  LP+SIE LS +++
Sbjct: 709 SKLKKIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLV 749



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV   ++   N ++  R + ++    ++NL+    F  FP        L ++ LEG T +
Sbjct: 612 LVHSNIDHLWNGKKYLRNLKSIDLSYSINLTRTPDFTVFP-------NLEKLVLEGCTNL 664

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  SI LL    L N ++CK++KSLPS +N +  L     SGCSKLK + E +G+ + 
Sbjct: 665 VKIHPSIALLKRLKLCNFRNCKSIKSLPSELN-MEFLETFDISGCSKLKKIPEFVGQTKR 723

Query: 802 L 802
           L
Sbjct: 724 L 724



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 34/172 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELL-----------------------------TGLE 31
           +   K LS L L GT++ ++PSSIE L                             +   
Sbjct: 718 VGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPHSLFFKQNFRVSSFG 777

Query: 32  LLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAE 90
           L   K    L  L  ++     L  L+L+ C+  + + P  + S+  L KL L G +   
Sbjct: 778 LFPRKSPHPLIPLLASLKQFSSLTELKLNDCNLCEGEIPNDIGSLSSLRKLELRGNNFVS 837

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPS-SINGLKSLKTLNLSGCCKLENVPD 141
           +P+SI LL  LE++ +  C  L +LP    +    +KT N   C  L+  PD
Sbjct: 838 LPASIHLLSKLEVITVENCTRLQQLPELPASDYILVKTDN---CTSLQVFPD 886


>gi|224145341|ref|XP_002325608.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862483|gb|EEE99989.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1083

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/454 (34%), Positives = 229/454 (50%), Gaps = 56/454 (12%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR------TLEL 59
            D+ +L+L  T+I EVPSSI+ LT L  L + GC  L SLP     ++ L        L++
Sbjct: 613  DIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITVPMESLDLSQDSVILDM 672

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPS-SIELLPGLELLYLNECKNLVRLPSS 118
            SGCSKL+  PQI   ME L +L L  T I E+PS S + +  L++L L+    L  LPSS
Sbjct: 673  SGCSKLESLPQITVPMESLVELNLSKTGIKEIPSISFKHMTSLKILKLDGTP-LKELPSS 731

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
            I  L  L++L++SGC KLE+ P     +ESL EL+++GT ++   SSI  +  L+SL  S
Sbjct: 732  IQFLTRLQSLDMSGCSKLESFPQITVPMESLAELNLNGTPLKELPSSIQFLTRLQSLDMS 791

Query: 179  GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAAIPSDI 237
            GC++  +                        P +T  + SL +L+LS  G+ E  +P  I
Sbjct: 792  GCSKLES-----------------------FPEITVPMESLAELNLSKTGIKE--LPLSI 826

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCS 296
             ++  LK+L L       LP SI  ++ LEEL L     +++LP Q+PP+L+++R   CS
Sbjct: 827  KDMVCLKKLTLEGTPIKELPLSIKDMVCLEELTLHGTP-IKALPDQLPPSLRYLRTRDCS 885

Query: 297  SLVTLFGALKLCR--SKYTIINC--IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
            SL T+   + + R   ++   NC  +D   L+    L I    E         P   + +
Sbjct: 886  SLETVPSIINIGRLQLRWDFTNCFKVDQKPLIEAMHLKIQSGEEI--------PRGGIEM 937

Query: 353  VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPA 412
            V PGS+IP+WF  +  GSS+T+  PS   N +++ G A C VF +P  S   Y    Y  
Sbjct: 938  VIPGSEIPEWFGDKGVGSSLTIQLPS---NRHQLKGIAFCLVFLLPPPSQDLYC--DYHV 992

Query: 413  HELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF 446
                   D +      Y   K G   SDH+ L +
Sbjct: 993  KYKNGEHDAASRKVISY---KLGTCDSDHMILQY 1023



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 127/281 (45%), Gaps = 58/281 (20%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL- 112
           LRT++LS  S L + P +  +   +S    D  S+ EVPSS++ L  LE + L  C NL 
Sbjct: 482 LRTIDLSKSSYLTELPDLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNLR 541

Query: 113 ---------------------------------VRL--------PSSINGLKSLKTLNLS 131
                                            +RL        P SI G   LK L+L 
Sbjct: 542 SFPMLYSKVLRKLSIDQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSITG--KLKVLDLW 599

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASA 187
           GC K+   P+  G +   EEL +S TAI+   SSI  +  LR L  +GC++    P  + 
Sbjct: 600 GCSKMTKFPEVSGDI---EELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITV 656

Query: 188 ---SWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAAIPS-DIDNLHS 242
              S  L     +L  S C     LP +T  + SL +L+LS  G+ E  IPS    ++ S
Sbjct: 657 PMESLDLSQDSVILDMSGCSKLESLPQITVPMESLVELNLSKTGIKE--IPSISFKHMTS 714

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
           LK L L+      LP+SI  L  L+ L++  C +L+S PQI
Sbjct: 715 LKILKLDGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPQI 755



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 8/163 (4%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS++ +  +   DI ++    T I+E+  +I+ L  L +L +NGC  LE LP     ++ 
Sbjct: 601 CSKMTKFPEVSGDIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITVPMES 660

Query: 707 LS------TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
           L        L++SG SK    P+IT   + L+E++L  T I+ +P SI       L  LK
Sbjct: 661 LDLSQDSVILDMSGCSKLESLPQITVPMESLVELNLSKTGIKEIP-SISFKHMTSLKILK 719

Query: 761 -DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            D   LK LPS+I  L  L+ +  SGCSKL++  +    +ESL
Sbjct: 720 LDGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPQITVPMESL 762



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 2/112 (1%)

Query: 668 TDIREL-SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           T I+E+ S++ + +  L  L L+G   L+ LP +I  L  L +L++SG SK   FP+IT 
Sbjct: 699 TGIKEIPSISFKHMTSLKILKLDGTP-LKELPSSIQFLTRLQSLDMSGCSKLESFPQITV 757

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
             + L E++L GT ++ LP+SI+ L+     ++  C  L+S P     + SL
Sbjct: 758 PMESLAELNLNGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPEITVPMESL 809



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 23/107 (21%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLE-----------------------RLPRTIS 702
           DGT ++EL  +I+ L  L  L ++GC  LE                        LP +I 
Sbjct: 721 DGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPQITVPMESLAELNLNGTPLKELPSSIQ 780

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
            L  L +L++SG SK   FPEIT   + L E++L  T I+ LP SI+
Sbjct: 781 FLTRLQSLDMSGCSKLESFPEITVPMESLAELNLSKTGIKELPLSIK 827



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 41/174 (23%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS- 726
           T++ +LS+A      LV L L  C +L  +P ++  L  L  +NL      R FP + S 
Sbjct: 494 TELPDLSMAK----NLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNLRSFPMLYSK 549

Query: 727 -----SRDQLLE-------------IHLEGTAIRGLPASIE------------------L 750
                S DQ L+             + L GT+I+ +P SI                    
Sbjct: 550 VLRKLSIDQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSITGKLKVLDLWGCSKMTKFPE 609

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +SG+I         ++ +PS+I  L  LR +  +GCSKL+++ E    +ESL++
Sbjct: 610 VSGDIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITVPMESLDL 663


>gi|357507539|ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
 gi|355499073|gb|AES80276.1| TMV resistance protein N [Medicago truncatula]
          Length = 1127

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/418 (36%), Positives = 221/418 (52%), Gaps = 40/418 (9%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L G  S+TEV  S+     + L+ L+ CK+L +LP  +  +  L+ L LSGC +
Sbjct: 650  NLEKLILKGCASLTEVHPSLVHHNKVVLVNLEDCKSLEALPEKLE-MSSLKELILSGCCE 708

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
             K  P+   SME+LS L L GT++  + SS+  L GL  L L +CK+LV LP +I+GL S
Sbjct: 709  FKFLPEFGESMENLSILALQGTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNS 768

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI----RRPTSSIFLMKNLRSLYFSGC 180
            L+ L++SGC KL  +PD L +++ LEEL  + T+I    R P S       L+ L F+GC
Sbjct: 769  LRVLDISGCSKLCRLPDGLKEIKCLEELHANDTSIDELYRLPDS-------LKVLSFAGC 821

Query: 181  NEPPASASWHLHLPFNLLGKSS-CPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                A  S +  +PFN +  S   P     P S   + SL  ++LS C L E +IP    
Sbjct: 822  KGTLAK-SMNRFIPFNRMRASQPAPTGFRFPHSAWNLPSLKHINLSYCDLSEESIPHYFL 880

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
             L SL  L L  NNFVT+P+SIS L  LE L L  C++LQ LP++PP++  + A+ C SL
Sbjct: 881  QLTSLVSLDLTGNNFVTIPSSISELSKLELLTLNCCEKLQLLPELPPSIMQLDASNCDSL 940

Query: 299  VT-LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLE-LQAVSDPGHKLSIVFPG 356
             T  F   K C               L  + + +S+ RE+   ++    P  +  ++ PG
Sbjct: 941  ETPKFDPAKPCS--------------LFASPIQLSLPREFKSFMEGRCLPTTRFDMLIPG 986

Query: 357  SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV---FQVP----KHSTGTYLF 407
             +IP WF+ Q   S   V  P+  +  ++ VGFA+C +   + VP     H    YLF
Sbjct: 987  DEIPSWFVPQRSVSWEKVHIPNN-FPQDEWVGFALCFLLVSYAVPPELCNHEIDCYLF 1043



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           +V + L  CK+LE LP  +  +  L  L LSG  +F+  PE   S + L  + L+GTA+R
Sbjct: 675 VVLVNLEDCKSLEALPEKLE-MSSLKELILSGCCEFKFLPEFGESMENLSILALQGTALR 733

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +S+  L G    NLKDCK+L  LP TI+GL SLR++  SGCSKL  + + L +++ L
Sbjct: 734 NLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISGCSKLCRLPDGLKEIKCL 793

Query: 803 E 803
           E
Sbjct: 794 E 794



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 27/204 (13%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           SM++LS L L GT++  + SS+  L GL  L LK CK+L  LP TI  L  LR L++SGC
Sbjct: 718 SMENLSILALQGTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISGC 777

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV--------- 113
           SKL + P  +  ++ L +L+ + TSI E+     L   L++L    CK  +         
Sbjct: 778 SKLCRLPDGLKEIKCLEELHANDTSIDEL---YRLPDSLKVLSFAGCKGTLAKSMNRFIP 834

Query: 114 --------------RLPSSINGLKSLKTLNLSGC-CKLENVPDTLGKVESLEELDVSGTA 158
                         R P S   L SLK +NLS C    E++P    ++ SL  LD++G  
Sbjct: 835 FNRMRASQPAPTGFRFPHSAWNLPSLKHINLSYCDLSEESIPHYFLQLTSLVSLDLTGNN 894

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNE 182
                SSI  +  L  L  + C +
Sbjct: 895 FVTIPSSISELSKLELLTLNCCEK 918



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT +R L+ ++  L GL  L L  CK+L  LP TI  L  L  L++SG SK    P+   
Sbjct: 729 GTALRNLTSSLGRLVGLTDLNLKDCKSLVCLPDTIHGLNSLRVLDISGCSKLCRLPDGLK 788

Query: 727 SRDQLLEIHLEGTAI---RGLPASIELLS 752
               L E+H   T+I     LP S+++LS
Sbjct: 789 EIKCLEELHANDTSIDELYRLPDSLKVLS 817



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 54/265 (20%)

Query: 26  LLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG 85
           L + L++L  +GC  L +L  T + L  +  ++LS  S+L+   Q +  ME+L  L L  
Sbjct: 579 LPSSLKVLRWRGCP-LKTLAQT-NQLDEVVDIKLSH-SQLELLWQGINFMENLKYLNLKF 635

Query: 86  TSIAEVPSSIELLPGLELLYLN------------------------ECKNLVRLPSSING 121
           +   +       +P LE L L                         +CK+L  LP  +  
Sbjct: 636 SKNLKRLPDFYGVPNLEKLILKGCASLTEVHPSLVHHNKVVLVNLEDCKSLEALPEKLE- 694

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           + SLK L LSGCC+ + +P+    +E+L  L + GTA+R  TSS+  +  L  L    C 
Sbjct: 695 MSSLKELILSGCCEFKFLPEFGESMENLSILALQGTALRNLTSSLGRLVGLTDLNLKDCK 754

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                                  +  +  ++ G+ SL  LD+S C      +P  +  + 
Sbjct: 755 S----------------------LVCLPDTIHGLNSLRVLDISGCS-KLCRLPDGLKEIK 791

Query: 242 SLKELYLNR---NNFVTLPASISGL 263
            L+EL+ N    +    LP S+  L
Sbjct: 792 CLEELHANDTSIDELYRLPDSLKVL 816



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 28/191 (14%)

Query: 623 GCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGT-------------- 668
           G     ++ GR  V ++SP +PG  SRLW + D   D V   + GT              
Sbjct: 490 GMHDLLQEMGRNIVIQESPNDPGKRSRLWSKED--IDRVLTKNKGTEKISSVVLNSLQPY 547

Query: 669 DIRELSLAIELLFGLVQLTLNGCK---NLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           + R  + A  +   +  L+LN       L  LP ++  L++     L  L++       T
Sbjct: 548 EARWSTEAFSMATQIKLLSLNEVHLPLGLSCLPSSLKVLRWRGC-PLKTLAQ-------T 599

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           +  D++++I L  + +  L   I  +      NLK  KNLK LP    G+ +L  +   G
Sbjct: 600 NQLDEVVDIKLSHSQLELLWQGINFMENLKYLNLKFSKNLKRLPD-FYGVPNLEKLILKG 658

Query: 786 CSKLKNVTETL 796
           C+ L  V  +L
Sbjct: 659 CASLTEVHPSL 669


>gi|399920222|gb|AFP55569.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1134

 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 162/516 (31%), Positives = 254/516 (49%), Gaps = 37/516 (7%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L   I   + L++++LS    L + P     + +L KL L+G T++ ++  SI LL
Sbjct: 618  NIDHLWNGIKCSRNLKSIDLSYSINLTRTPDFTG-IPNLEKLVLEGCTNLVKIHPSITLL 676

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L++     CK++  LPS +N ++ L+T ++SGC KL+ +P+ +G+ ++L +L + G+A
Sbjct: 677  KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIGGSA 735

Query: 159  IRR-PTSSIFLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPS 211
            +   P+S   L K+L  L  +G    E P S     +L  +  G    KS CP+  +L S
Sbjct: 736  VENLPSSFERLSKSLVELDLNGIVIREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPLLAS 795

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L    SLT+L L+DC L E  IP+DI  L SL+ L L  NNFV LPASI  L  L+ + +
Sbjct: 796  LKHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQLRGNNFVNLPASIHLLSKLKRINV 855

Query: 272  EDCKRLQSLPQIPPNLQF-VRANGCSSLVTLFGALKLCRSK---YTIINCIDSLKLLRKN 327
            E+CKRLQ LP++P   +  V  + C+SL        L R      + INC  ++      
Sbjct: 856  ENCKRLQQLPELPATDELRVVTDNCTSLQVFPDPPNLSRCPEFWLSGINCFSAVGNQGFR 915

Query: 328  GLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVV 387
                S L++ LE    S   +   +V PGS+IP+WF  Q+ G S+    PSY  N +K +
Sbjct: 916  YFLYSRLKQLLEETPWS--LYYFRLVIPGSEIPEWFNNQSVGDSVIEKLPSYACN-SKWI 972

Query: 388  GFAICCVFQVPKHSTGTY--LFHSYPAHELECSMDGSGEGHYIYFRGKF----GHVVSDH 441
            G A+C +  VP+ +      + H  P   + C  + +  GH     G+       +VSDH
Sbjct: 973  GVALCFLI-VPQDNPSAVPEVRHLDPFTRVFCCWNKNCSGH-----GRLVTTVKQIVSDH 1026

Query: 442  LWLLFLPRHGHNWQ--FESNLIRLSFRSISDPT------WKVKRCGFHPIYMHEVEEFDE 493
            L    LP+     Q   E     + F  + D T       +VK+CG   +Y H+ EE   
Sbjct: 1027 LLFAVLPKFIWKPQNCLEDTCTEIKFVFVVDQTVGNSRGLQVKKCGARILYEHDTEELIS 1086

Query: 494  TTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSS 529
               QS   +     E   +  G+ ++  Q + +  S
Sbjct: 1087 KMNQSKSSSISLYEEAMDEQEGAMVKATQEASTSRS 1122



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG S
Sbjct: 653 PNLEKLVLEGCTNLVKIHPSITLLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCS 711

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE       L ++ + G+A+  LP+S E LS +++
Sbjct: 712 KLKMIPEFVGQTKTLSKLCIGGSAVENLPSSFERLSKSLV 751



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 19  EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           E+P+ I  L+ LELL L+G  N  +LP +I  L  L+ + +  C +L++ P++ A+ E
Sbjct: 816 EIPNDIGYLSSLELLQLRG-NNFVNLPASIHLLSKLKRINVENCKRLQQLPELPATDE 872


>gi|408537104|gb|AFU75205.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/288 (44%), Positives = 185/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS  E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSFVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  +PSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P ASIS L  L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L S+P +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +SI 
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 RLTQLRALALAGC 263



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T   E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK + FP
Sbjct: 7   VLEECTSFVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+S+PS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 24/204 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + ELS ++E L G+  + L+ CK+LE +P +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     +   LG + SLE  +  
Sbjct: 178 ALSSQVSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSSIPAASISRLTQL 255


>gi|408537098|gb|AFU75202.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/288 (45%), Positives = 184/288 (63%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L LL LK C+NL ++P  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILVLSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LK LN+SGC 
Sbjct: 71  MNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILNVSGCV 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KLEN+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  V +   +L+G+CSL  LDLSDC + +  + S++  L SLK L L+ NNF 
Sbjct: 189 ----GQKS--VGVNFQNLSGLCSLIMLDLSDCNITDGGVLSNLGFLSSLKVLILDGNNFF 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L L    RL+SLP++PP++  + A+ C+SL+++
Sbjct: 243 NIPGASISRLTRLKILALRGRGRLESLPELPPSITGIYAHDCTSLMSI 290



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ +P+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIGDLGKLVLLNLKNCRNLKTIPKRIR-LEKLEILVLSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+++ 
Sbjct: 66  EIEEKMNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILN 125

Query: 783 PSGCSKLKNVTE 794
            SGC KL+N+ +
Sbjct: 126 VSGCVKLENLPD 137



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 31/216 (14%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+ L +SGC 
Sbjct: 71  MNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLKCLKILNVSGCV 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KL+  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L           
Sbjct: 131 KLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SL+ L + G      P 
Sbjct: 191 KSVGVNFQNLSGLCSLIMLDLSDC----NITDGGVLSNLGFLSSLKVLILDGNNFFNIPG 246

Query: 164 SSIFLMKNLRSLYFSGCNE-------PPASASWHLH 192
           +SI  +  L+ L   G          PP+    + H
Sbjct: 247 ASISRLTRLKILALRGRGRLESLPELPPSITGIYAH 282



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 24/204 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L  LN+SG  K    P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKILNVSGCVKLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCSKLK-NVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     V   LG + SL+V +  
Sbjct: 178 ALSSQVSSSSHGQKSVGVNFQNLSGLCSLIMLDLSDCNITDGGVLSNLGFLSSLKVLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFFNIPGASISRLTRL 255



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 83/181 (45%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +  SI  L  L  LNL  C  L+ +P  + ++E LE L +SG +
Sbjct: 1   PNLERLVLEECTSLVEINFSIGDLGKLVLLNLKNCRNLKTIPKRI-RLEKLEILVLSGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY          AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNRLAELYLGATALSELPASVEKLSGVGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  L++S C +    +P D+  L  L+EL+       T+P+S+S L NL+ L L  C  
Sbjct: 120 CLKILNVSGC-VKLENLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKYLSLRGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|408537092|gb|AFU75199.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/288 (44%), Positives = 186/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL ++P  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVSLNLKNCRNLKTIPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  LPSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P ASIS L  L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASISRLTQLRALTLAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +SI 
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 RLTQLRALTLAGC 263



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L + T + E++ +I  L  LV L L  C+NL+ +P+ I  L+ L  L LSG SK + FP
Sbjct: 7   ILEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTIPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 24/204 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + ELS ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     +   LG + SLE  +  
Sbjct: 178 ALSSQVSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSSIPAASISRLTQL 255


>gi|225460149|ref|XP_002276056.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1131

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 172/508 (33%), Positives = 254/508 (50%), Gaps = 53/508 (10%)

Query: 6    DLSDLYLDGTSITEVPS--SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            DL  LY  G S+  +P   S + L  L +       ++  L   I  LK L++++LS   
Sbjct: 602  DLRYLYWHGYSLKSLPKDFSPKHLVDLSM----PYSHIKKLWKGIKVLKSLKSMDLSHSK 657

Query: 64   KLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P   + + +L +L L+G  ++ EV  S+  L  L  L L +CK L RLPS I   
Sbjct: 658  CLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNF 716

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            KSL+TL LSGC K E  P+  G +E L+EL   GT +R    S F M+NL+ L F GC  
Sbjct: 717  KSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCG- 775

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
             PASASW          +SS  +   +PS + +C L KLDLSDC + + A    +  L S
Sbjct: 776  -PASASWLWS------KRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSS 828

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ--FVRAN------- 293
            L++L L+ NNFVTLP ++SGL +L  L LE+CKRLQ+LPQ P +L+   +R N       
Sbjct: 829  LEDLNLSGNNFVTLP-NMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILRGNNFVTLPN 887

Query: 294  --GCSSLVTL-FGALKLCRSKYTIINCIDSLKLLRKNGL----AISMLREYLELQAVSDP 346
              G S L TL  G  K   +   + + I SL       L    ++ +LR + EL+++   
Sbjct: 888  MSGLSHLKTLVLGNCKRLEALPQLPSSIRSLNATDCTSLGTTESLKLLRPW-ELESLDS- 945

Query: 347  GHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF--QVP-KHSTG 403
               ++ V PGS+IP W  YQ+  + I    P  L      +GFA+  VF  Q P  H   
Sbjct: 946  --DVAFVIPGSRIPDWIRYQSSENVIEADLP--LNWSTNCLGFALALVFSSQPPVSHWLW 1001

Query: 404  TYLFHSYP----AHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESN 459
              +F  +     + E +C     G+   +       H V DH+ L ++P        +  
Sbjct: 1002 AEVFLDFGTCCCSIETQCFFHLEGDNCVL------AHEV-DHVLLNYVPVQPSLSPHQVI 1054

Query: 460  LIRLSFRSISDPTWKVKRCGFHPIYMHE 487
             I+ +F   S+  +++KRCG   +Y++E
Sbjct: 1055 HIKATFAITSETGYEIKRCGLGLVYVNE 1082



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+L  CK L RLP  I   K L TL LSG SKF EFPE   + + L E+H +GT +R LP
Sbjct: 698 LSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALP 757

Query: 746 AS 747
            S
Sbjct: 758 PS 759



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 4/113 (3%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG--TAIRGLPASIEL 750
           ++++L + I  LK L +++LS      E P+  S    L  + LEG        P+  +L
Sbjct: 634 HIKKLWKGIKVLKSLKSMDLSHSKCLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDL 692

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              N LS LKDCK L+ LPS I   +SLR +  SGCSK +   E  G +E L+
Sbjct: 693 KKLNFLS-LKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLK 744



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 32/204 (15%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLT- 687
           ++ G + VR++ P+EPG  SRLWE+ D F D+++       I  + L +  L  ++  T 
Sbjct: 494 QQMGWEIVRQECPKEPGRRSRLWEQEDIF-DVLKRNMGSEKIEGIFLDLSHLEDILDFTT 552

Query: 688 --LNGCKNLERLPRTISALKYLS------TLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
               G K L RL +  ++   L       T N     + R   E     D L  ++  G 
Sbjct: 553 EAFAGMKKL-RLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGY 611

Query: 740 AIRGLP--------ASIELLSGNILSNLKDCKNLKSLPST-------------INGLRSL 778
           +++ LP          + +   +I    K  K LKSL S               +G+ +L
Sbjct: 612 SLKSLPKDFSPKHLVDLSMPYSHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNL 671

Query: 779 RMMYPSGCSKLKNVTETLGKVESL 802
             +   GC  L  V  +LG ++ L
Sbjct: 672 ERLVLEGCINLPEVHPSLGDLKKL 695



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGC-----------KNLSSLPVTI- 48
             +++ L +L+ DGT +  +P S   +  L+ L+ +GC           ++ +S+  T+ 
Sbjct: 737 FGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCGPASASWLWSKRSSNSICFTVP 796

Query: 49  --SSLKCLRTLELSGC-----SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL 101
             S+L  L+ L+LS C     + L      ++S+EDL+   L G +   +P ++  L  L
Sbjct: 797 SSSNLCYLKKLDLSDCNISDGANLGSL-GFLSSLEDLN---LSGNNFVTLP-NMSGLSHL 851

Query: 102 ELLYLNECKNLVRLPS-------------------SINGLKSLKTLNLSGCCKLENVPDT 142
             L L  CK L  LP                    +++GL  LKTL L  C +LE +P  
Sbjct: 852 VFLGLENCKRLQALPQFPSSLEDLILRGNNFVTLPNMSGLSHLKTLVLGNCKRLEALPQL 911

Query: 143 LGKVESLEELDVS 155
              + SL   D +
Sbjct: 912 PSSIRSLNATDCT 924


>gi|408537112|gb|AFU75209.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/288 (44%), Positives = 185/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS  E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSFVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  +PSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P ASIS L  L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T   E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK + FP
Sbjct: 7   VLEECTSFVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+S+PS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L S+P +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +SI 
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 RLTQLRALALAGC 263



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 24/204 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + ELS ++E L G+  + L+ CK+LE +P +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     +   LG + SLE  +  
Sbjct: 178 ALSSQVSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSSIPAASISRLTQL 255


>gi|51477390|gb|AAU04763.1| MRGH8 [Cucumis melo]
          Length = 1058

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/357 (38%), Positives = 200/357 (56%), Gaps = 18/357 (5%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L  L L G   +T++  S+  L  L  L LK CK L ++P +IS L+ L  L L
Sbjct: 674  FSGVPNLERLILSGCVRLTKLHQSLGSLKRLIQLDLKNCKALKAIPFSIS-LESLIVLSL 732

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CS LK FP IV +M++L++L+LDGTSI E+  SI  L GL LL L  C NL+ LP++I
Sbjct: 733  SNCSSLKNFPNIVGNMKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLELPNTI 792

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L  LKTL L GC KL  +P++LG + SLE+LDV+ T I +   S+ L+ NL  L   G
Sbjct: 793  GSLICLKTLTLHGCSKLTRIPESLGFIASLEKLDVTNTCINQAPLSLQLLTNLEILDCRG 852

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDID 238
                 +    H   P       S  + L     L+  CS+ KL+LSDC L +  IP ++ 
Sbjct: 853  L----SRKFIHSLFPSWNSSSYSSQLGLKFTYCLSSFCSMKKLNLSDCSLKDGDIPDNLQ 908

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            +L SL+ L L+ N+F  LP S+  L+NL  L L +CKRLQ LP++P +++ V A  C SL
Sbjct: 909  SLPSLEILDLSGNSFSFLPKSVEHLVNLRTLYLVNCKRLQELPKLPLSVRSVEARDCVSL 968

Query: 299  VTLFGALKLCRSKYT---IINCI-----DSLKLLRKNGLAI---SMLREYLELQAVS 344
               +   K   S  T   +I+C       + K+ R N  +I   +M++ Y+E+  +S
Sbjct: 969  KEYYNQEKQMPSSSTGMAVISCPITDEEHNFKIDRVNLSSIHLRTMVQRYIEVHTLS 1025



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LS    + +L  ++  L  L+QL L  CK L+ +P +IS L+ L  L+LS  S  + FP
Sbjct: 684 ILSGCVRLTKLHQSLGSLKRLIQLDLKNCKALKAIPFSIS-LESLIVLSLSNCSSLKNFP 742

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            I  +   L E+HL+GT+I+ L  SI  L+G +L NL++C NL  LP+TI  L  L+ + 
Sbjct: 743 NIVGNMKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLT 802

Query: 783 PSGCSKLKNVTETLGKVESLE 803
             GCSKL  + E+LG + SLE
Sbjct: 803 LHGCSKLTRIPESLGFIASLE 823



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 62/127 (48%), Gaps = 14/127 (11%)

Query: 646 NCSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           NCS L      FP+IV       ++  DGT I+EL  +I  L GLV L L  C NL  LP
Sbjct: 734 NCSSL----KNFPNIVGNMKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLELP 789

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
            TI +L  L TL L G SK    PE       L ++ +  T I   P S++LL+      
Sbjct: 790 NTIGSLICLKTLTLHGCSKLTRIPESLGFIASLEKLDVTNTCINQAPLSLQLLTN---LE 846

Query: 759 LKDCKNL 765
           + DC+ L
Sbjct: 847 ILDCRGL 853


>gi|408537096|gb|AFU75201.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 129/288 (44%), Positives = 186/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSLVEIFFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P ASIS L  L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASISRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 112/193 (58%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +SI 
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 RLTQLRALALAGC 263



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E+  +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK + FP
Sbjct: 7   VLEECTSLVEIFFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 24/204 (11%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + ELS ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     +   LG + SLE  +  
Sbjct: 178 ALSSQVSSSSHGQKSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILD 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKL 832
                  N+F  +  +++  +T+L
Sbjct: 238 G------NNFSSIPAASISRLTQL 255


>gi|298205188|emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 161/495 (32%), Positives = 243/495 (49%), Gaps = 33/495 (6%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++M +L  L L D TS+  V  SI  L  L +L L GC+NL+SLP +I  L  L  + L
Sbjct: 515 FSNMPNLETLILADCTSLNVVDPSIGDLKKLTVLNLLGCENLTSLPSSIQYLDSLEAMNL 574

Query: 60  SGCSKLKKFPQIVAS-MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CS L++FP++  S M+ LS L LDG  I E+PSSIELL  L+ LYL++CKNL  LPSS
Sbjct: 575 MTCSNLEEFPEMKGSPMKALSDLLLDGCGIKELPSSIELLTRLKRLYLSKCKNLRSLPSS 634

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  LKSL  L+L GC  L+  P+ +  ++ LE LD+  + I+   SSI  +K+L  L  S
Sbjct: 635 ICRLKSLVQLDLHGCSNLDTFPEIMEDMKCLESLDIRSSGIKELPSSIQNLKSLLRLDMS 694

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
            C      + ++L     L G S+       P   G  S+ +LD S C L E +IP++I 
Sbjct: 695 NCLVTLPDSIYNLR-SVTLRGCSNLEKFPKNPE--GFYSIVQLDFSHCNLMEGSIPTEIW 751

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           +L+SL+ L L+ N+ V++P+ IS L  L+ L++  C+ LQ +P++P +L+ + A  C+ L
Sbjct: 752 DLNSLEILNLSWNHMVSIPSGISQLCKLDFLDISHCEMLQDIPELPSSLRKIDALYCTKL 811

Query: 299 VTLFGALKLCRSKYT-IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
             L     L  S      N   +  L  K G                    K+ I+    
Sbjct: 812 EMLSSPSSLLWSSLLKWFNPTSNEHLNCKEG--------------------KMIIILGNG 851

Query: 358 QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF----HSYPAH 413
            IP W ++Q  GS + +  P   Y  +  +GFA   +++   H T    F       P  
Sbjct: 852 GIPGWVLHQEIGSQVRIEPPLNWYEDDHFLGFAFFTLYRDYAHCTIPSRFSLRLRGDPDE 911

Query: 414 ELECSMDGSGEGHYIYFR-GKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPT 472
            +    D +    + +    +     SD LW+   P++    ++        F +  D T
Sbjct: 912 VVGDCNDHNDSRIWNWCECNRCYDDASDGLWVTLYPKNAIPNKYHRKQ-PWHFLAAVDAT 970

Query: 473 WKVKRCGFHPIYMHE 487
             +KRCG   IY H+
Sbjct: 971 -NIKRCGVQLIYTHD 984



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 4/149 (2%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L+D T +  +  +I  L  L  L L GC+NL  LP +I  L  L  +NL   S   EFP
Sbjct: 525 ILADCTSLNVVDPSIGDLKKLTVLNLLGCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFP 584

Query: 723 EITSSRDQLL-EIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           E+  S  + L ++ L+G  I+ LP+SIELL+      L  CKNL+SLPS+I  L+SL  +
Sbjct: 585 EMKGSPMKALSDLLLDGCGIKELPSSIELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQL 644

Query: 782 YPSGCSKLKN---VTETLGKVESLEVRLS 807
              GCS L     + E +  +ESL++R S
Sbjct: 645 DLHGCSNLDTFPEIMEDMKCLESLDIRSS 673



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 17/152 (11%)

Query: 647 CSRLWEEADEFPD--------IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           CS L    +EFP+        +  +L DG  I+EL  +IELL  L +L L+ CKNL  LP
Sbjct: 577 CSNL----EEFPEMKGSPMKALSDLLLDGCGIKELPSSIELLTRLKRLYLSKCKNLRSLP 632

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
            +I  LK L  L+L G S    FPEI      L  + +  + I+ LP+SI+ L   +  +
Sbjct: 633 SSICRLKSLVQLDLHGCSNLDTFPEIMEDMKCLESLDIRSSGIKELPSSIQNLKSLLRLD 692

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           + +C  L +LP +I  LRS+ +    GCS L+
Sbjct: 693 MSNC--LVTLPDSIYNLRSVTL---RGCSNLE 719



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 110/239 (46%), Gaps = 7/239 (2%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           S +K+  Q    +E L  L L G S     +S   +P LE L L +C +L  +  SI  L
Sbjct: 484 SNIKQLMQRNERLEQLKFLNLSG-SRQLTETSFSNMPNLETLILADCTSLNVVDPSIGDL 542

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDV--SGTAIRRPTSSIFLMKNLRSLYFSGC 180
           K L  LNL GC  L ++P ++  ++SLE +++         P      MK L  L   GC
Sbjct: 543 KKLTVLNLLGCENLTSLPSSIQYLDSLEAMNLMTCSNLEEFPEMKGSPMKALSDLLLDGC 602

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                 +S  L      L  S C     LP S+  + SL +LDL  C       P  +++
Sbjct: 603 GIKELPSSIELLTRLKRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCS-NLDTFPEIMED 661

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           +  L+ L +  +    LP+SI  L +L  L++ +C  L +LP    NL+ V   GCS+L
Sbjct: 662 MKCLESLDIRSSGIKELPSSIQNLKSLLRLDMSNC--LVTLPDSIYNLRSVTLRGCSNL 718


>gi|399920209|gb|AFP55556.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1117

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 168/526 (31%), Positives = 260/526 (49%), Gaps = 52/526 (9%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
            L  L++++LS    L + P     + +L KL L+G T++ ++  SI LL  L++  L  C
Sbjct: 605  LDNLKSIDLSYSINLTRTPDFTG-IPNLEKLILEGCTNLVDIHPSIALLKRLKIWNLRNC 663

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            +++  LPS +  ++ L+TL+++GC KL+ +P  + K + L +L +SGTA+ +  S   L 
Sbjct: 664  QSIKSLPSEVY-MEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLSGTAVEKLPSIEQLS 722

Query: 170  KNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPSLTGVCSLTKLDL 223
            ++L  L  SG    E P S      L  +  G    KS  P+  +L SL    SLT+L L
Sbjct: 723  ESLVELDLSGVVRRERPYSLFLQQILGVSSFGLFPRKSPHPLIPLLASLKHFSSLTELYL 782

Query: 224  SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
            +DC L E  +P+DI +L SL  L L  NNFV+LPASI  L  L    +E+CKRLQ LP++
Sbjct: 783  NDCNLSEGELPNDIGSLSSLVRLELRGNNFVSLPASIHLLSKLRRFNVENCKRLQQLPEL 842

Query: 284  PPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG---LAISMLREYLEL 340
              N    R + C+SL   FG +    + +  +NC++ L ++       L  S+L+ ++E+
Sbjct: 843  WANDVLSRTDNCTSLQLFFGRI----TTHFWLNCVNCLSMVGNQDVSYLLYSVLKRWIEI 898

Query: 341  QAVS-------------DPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVV 387
            Q +S              P   L  V PGS+IP+WF  Q+ G  +T     +    +K +
Sbjct: 899  QVLSRCDMTVHMQETHRRPLEYLDFVIPGSEIPEWFNNQSVGDRVTEKLLPWDACNSKWI 958

Query: 388  GFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHV-------VSD 440
            GFA+C +  VP+ +       + P   L          ++ Y+  K G V       VSD
Sbjct: 959  GFAVCALI-VPQDNPS-----AVPEDPLLDPDTCLISCNWNYYGTKLGGVGICVKQFVSD 1012

Query: 441  HLWLLFLP---RHGHNWQFESNLIRLSFRSI-SDPTWKVKRCGFHPIYMHEVEEFDETTK 496
            HL L+ LP   R   N   E+N +    R++ S    KVK+CG   +Y  + EE      
Sbjct: 1013 HLSLVVLPSPLRTPENC-LEANFVFKFIRAVGSKRCMKVKKCGVRALYGDDREELISKMN 1071

Query: 497  QSTRFTSCNLNEVHHDFVGSNM----EVAQASGSGSSQWKWLKPVE 538
            QS + +S +L E   D     M    + A  SGSG S  ++    E
Sbjct: 1072 QS-KSSSISLYEEGMDEQDGAMVKAKQEAATSGSGGSDDEYYSAAE 1116



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 31/210 (14%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G T++ ++  SI LL  L++  L+ C+++ SLP  +  ++ L TL++
Sbjct: 625 FTGIPNLEKLILEGCTNLVDIHPSIALLKRLKIWNLRNCQSIKSLPSEVY-MEFLETLDV 683

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL---LPGLEL-----------LY 105
           +GCSKLK  P+ +   + LSKL L GT++ ++PS  +L   L  L+L           L+
Sbjct: 684 TGCSKLKMIPKFMQKTKRLSKLSLSGTAVEKLPSIEQLSESLVELDLSGVVRRERPYSLF 743

Query: 106 LNEC--------------KNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLE 150
           L +                 L+ L +S+    SL  L L+ C   E  +P+ +G + SL 
Sbjct: 744 LQQILGVSSFGLFPRKSPHPLIPLLASLKHFSSLTELYLNDCNLSEGELPNDIGSLSSLV 803

Query: 151 ELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++ G       +SI L+  LR      C
Sbjct: 804 RLELRGNNFVSLPASIHLLSKLRRFNVENC 833



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 61/101 (60%), Gaps = 3/101 (2%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++ +++ +G T++ ++  +I LL  L    L  C++++ LP  +  +++L TL+++G 
Sbjct: 628 IPNLEKLILEGCTNLVDIHPSIALLKRLKIWNLRNCQSIKSLPSEV-YMEFLETLDVTGC 686

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           SK +  P+      +L ++ L GTA+  LP SIE LS +++
Sbjct: 687 SKLKMIPKFMQKTKRLSKLSLSGTAVEKLP-SIEQLSESLV 726



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M   K LS L L GT++ ++PS  +L   L  L L G        V       L   ++ 
Sbjct: 696 MQKTKRLSKLSLSGTAVEKLPSIEQLSESLVELDLSGV-------VRRERPYSLFLQQIL 748

Query: 61  GCSKLKKFPQ--------IVASME---DLSKLYLDGTSIA--EVPSSIELLPGLELLYLN 107
           G S    FP+        ++AS++    L++LYL+  +++  E+P+ I  L  L  L L 
Sbjct: 749 GVSSFGLFPRKSPHPLIPLLASLKHFSSLTELYLNDCNLSEGELPNDIGSLSSLVRLEL- 807

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
              N V LP+SI+ L  L+  N+  C +L+ +P+
Sbjct: 808 RGNNFVSLPASIHLLSKLRRFNVENCKRLQQLPE 841



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 671 RELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL-----NLSGLSKFREFPEIT 725
           R  SL ++ + G+    L   K+   L   +++LK+ S+L     N   LS+  E P   
Sbjct: 738 RPYSLFLQQILGVSSFGLFPRKSPHPLIPLLASLKHFSSLTELYLNDCNLSE-GELPNDI 796

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            S   L+ + L G     LPASI LLS     N+++CK L+ LP
Sbjct: 797 GSLSSLVRLELRGNNFVSLPASIHLLSKLRRFNVENCKRLQQLP 840



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 4/121 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L+L   K ++ L      L  L +++LS        P+ T   + L ++ LEG T +
Sbjct: 585 LVELSLPYSK-IDHLWNGKKCLDNLKSIDLSYSINLTRTPDFTGIPN-LEKLILEGCTNL 642

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  SI LL    + NL++C+++KSLPS +  +  L  +  +GCSKLK + + + K + 
Sbjct: 643 VDIHPSIALLKRLKIWNLRNCQSIKSLPSEVY-MEFLETLDVTGCSKLKMIPKFMQKTKR 701

Query: 802 L 802
           L
Sbjct: 702 L 702


>gi|296089409|emb|CBI39228.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 162/496 (32%), Positives = 238/496 (47%), Gaps = 71/496 (14%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M  M+ L +L L  T I E+P SI  L  L  L L+ C+NL SLP +I  LK L  L+L 
Sbjct: 664  MEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLY 723

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             CS L+ FP+I+ +ME L KL L GT I E+PSSIE L  L  + L E KNL  LPSSI 
Sbjct: 724  YCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVESKNLRSLPSSIC 783

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             LK L+ LNL GC  LE  P+ +  +E L++LD+SGT+I++  SSI  + +L S   S C
Sbjct: 784  RLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYC 843

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                +  S                      S+ G+ SLTKL LS         P+ +   
Sbjct: 844  TNLRSLPS----------------------SIGGLKSLTKLSLS-------GRPNRVT-- 872

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
               ++L+L++NN   +P+ IS L NLE L++  CK L+ +P +P +L+ + A+GC+ L T
Sbjct: 873  ---EQLFLSKNNIHHIPSVISQLCNLECLDISHCKMLEEIPDLPSSLREIDAHGCTGLGT 929

Query: 301  LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIP 360
            L     L  S           K  +K                V  P     I    + IP
Sbjct: 930  LSSPSSLLWSSLL--------KWFKK----------------VETPFEWGRINLGSNGIP 965

Query: 361  KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD 420
            +W ++Q  GS I +  P   Y+ +  +GF   C+++ P       L       E   +  
Sbjct: 966  RWVLHQEVGSQIRIELPMNCYHDDHFLGFGFFCLYE-PVVDLNLSLRFDEDLDEKAYAYK 1024

Query: 421  GSG--EGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNL---IRLSFRS-ISDPTWK 474
            G+   E H I          SD +W+++ P+     + +SN    +  SF + I D +  
Sbjct: 1025 GASWCECHDI------NSSESDEVWVVYCPKIAIGDKLQSNQYKHLHASFDACIIDCSKN 1078

Query: 475  VKRCGFHPIYMHEVEE 490
            +K CG H +Y  + ++
Sbjct: 1079 IKSCGIHLVYSQDYQQ 1094



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 161/301 (53%), Gaps = 32/301 (10%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  LYL   +I E+PSSI  LT L+ L+++GC+NL SLP +I  LK L  L+L GCS L 
Sbjct: 528 LKRLYLHSIAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLG 587

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            FP+I+ +ME L++L L GT +  +PSSIE L  L  L L  CKNL  LPSSI  LKSL+
Sbjct: 588 TFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLE 647

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
            L+L GC  LE  P+ +  +E L EL++S T I+                     E P S
Sbjct: 648 ELDLFGCSNLETFPEIMEDMECLMELNLSRTCIK---------------------ELPPS 686

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVC---SLTKLDLSDCGLGEAAIPSDIDNLHSL 243
             +  HL F  LG   C     LPS   +C   SL +LDL  C   E   P  ++N+  L
Sbjct: 687 IGYLNHLTF--LGLQCCQNLRSLPS--SICRLKSLEELDLYYCSNLE-IFPEIMENMECL 741

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVT 300
            +L L+  +   LP+SI  L +L  + L + K L+SLP     L+F+      GCS L T
Sbjct: 742 IKLDLSGTHIKELPSSIEYLNHLTSMRLVESKNLRSLPSSICRLKFLEKLNLYGCSHLET 801

Query: 301 L 301
            
Sbjct: 802 F 802



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           I EL  +I  L  L  L++ GC+NL  LP +I  LK L  L+L G S    FPEI  + +
Sbjct: 538 IDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLGTFPEIMENME 597

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L E++L GT ++GLP+SIE L+      L+ CKNL+SLPS+I  L+SL  +   GCS L
Sbjct: 598 WLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNL 657

Query: 790 KNVTETLGKVESL-EVRLS 807
           +   E +  +E L E+ LS
Sbjct: 658 ETFPEIMEDMECLMELNLS 676



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 9/147 (6%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +         GT I+EL  +IE L  L  + L   KNL  LP +I  LK+L  
Sbjct: 731 FPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVESKNLRSLPSSICRLKFLEK 790

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           LNL G S    FPEI    + L ++ L GT+I+ LP+SI  L+      L  C NL+SLP
Sbjct: 791 LNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYCTNLRSLP 850

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETL 796
           S+I GL+SL  +  SG  +   VTE L
Sbjct: 851 SSIGGLKSLTKLSLSG--RPNRVTEQL 875



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 7/153 (4%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +         GT ++ L  +IE L  L +L L  CKNL  LP +I  LK L  
Sbjct: 589 FPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEE 648

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           L+L G S    FPEI    + L+E++L  T I+ LP SI  L+      L+ C+NL+SLP
Sbjct: 649 LDLFGCSNLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLP 708

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           S+I  L+SL  +    CS L+   E +  +E L
Sbjct: 709 SSICRLKSLEELDLYYCSNLEIFPEIMENMECL 741



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 11/164 (6%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS L    + FP+I++ +          T I+EL  +I  L  L  L L  C+NL  LP 
Sbjct: 654 CSNL----ETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPS 709

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+L   S    FPEI  + + L+++ L GT I+ LP+SIE L+      L
Sbjct: 710 SICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRL 769

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            + KNL+SLPS+I  L+ L  +   GCS L+   E +  +E L+
Sbjct: 770 VESKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLK 813



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 9/157 (5%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
            L QL +  C+ L+++  +I  LK L+ LNL G  K    P        L  ++L   AI
Sbjct: 479 NLEQLNIELCEKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAI 538

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP+SI  L+     +++ C+NL+SLPS+I  L+SL  +   GCS L    E +  +E 
Sbjct: 539 DELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLGTFPEIMENMEW 598

Query: 802 L-EVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
           L E+ LS  +   +         S++E +  L + EL
Sbjct: 599 LTELNLSGTHVKGL--------PSSIEYLNHLTRLEL 627


>gi|147787212|emb|CAN75767.1| hypothetical protein VITISV_032562 [Vitis vinifera]
          Length = 600

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 120/267 (44%), Positives = 166/267 (62%), Gaps = 14/267 (5%)

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           C KLK+ P+++ +M  L +L+L GT+I ++PSSI+ L GL LL L ECK+L  LP SI  
Sbjct: 336 CLKLKELPEVLENMGSLLELFLYGTAIKKLPSSIQHLSGLVLLNLRECKSLAILPHSIRK 395

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC- 180
           LKSL+TL LSGC KL+N+P  LG ++ LE+L+ +GTAI+    SI L++NL  L F GC 
Sbjct: 396 LKSLQTLILSGCSKLDNLPKGLGSLQGLEKLEAAGTAIKELPPSISLLENLEVLSFEGCK 455

Query: 181 ---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
              + P  S      LP   +G+S       L S  G+ SL KL+LSDC + E AIP+D 
Sbjct: 456 GLESNPRNSLPSFQLLPAE-IGRSR---GFQLHSFFGLRSLRKLNLSDCNILEGAIPNDF 511

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
            +L SL+ L L+RNNFVTLPAS++ L  L+ L L  CKRLQSLP++P +++ + A  C+ 
Sbjct: 512 SSLCSLEYLDLSRNNFVTLPASLNQLSQLKGLRLGYCKRLQSLPELPSSIEEIDAPDCTV 571

Query: 298 LVTLFGALKLCRSK------YTIINCI 318
              +     + RSK      +T  NC 
Sbjct: 572 TENILCPSSVYRSKECGGLRFTFSNCF 598



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 112/203 (55%), Gaps = 23/203 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L +L+L GT+I ++PSSI+ L+GL LL L+ CK+L+ LP +I  LK L+TL LS
Sbjct: 346 LENMGSLLELFLYGTAIKKLPSSIQHLSGLVLLNLRECKSLAILPHSIRKLKSLQTLILS 405

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR------ 114
           GCSKL   P+ + S++ L KL   GT+I E+P SI LL  LE+L    CK L        
Sbjct: 406 GCSKLDNLPKGLGSLQGLEKLEAAGTAIKELPPSISLLENLEVLSFEGCKGLESNPRNSL 465

Query: 115 -----LPSSIN-----------GLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSGT 157
                LP+ I            GL+SL+ LNLS C  LE  +P+    + SLE LD+S  
Sbjct: 466 PSFQLLPAEIGRSRGFQLHSFFGLRSLRKLNLSDCNILEGAIPNDFSSLCSLEYLDLSRN 525

Query: 158 AIRRPTSSIFLMKNLRSLYFSGC 180
                 +S+  +  L+ L    C
Sbjct: 526 NFVTLPASLNQLSQLKGLRLGYC 548



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 61/87 (70%)

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K +E PE+  +   LLE+ L GTAI+ LP+SI+ LSG +L NL++CK+L  LP +I  L+
Sbjct: 338 KLKELPEVLENMGSLLELFLYGTAIKKLPSSIQHLSGLVLLNLRECKSLAILPHSIRKLK 397

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  SGCSKL N+ + LG ++ LE
Sbjct: 398 SLQTLILSGCSKLDNLPKGLGSLQGLE 424



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 81/166 (48%), Gaps = 29/166 (17%)

Query: 656 EFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           E P++++ +         GT I++L  +I+ L GLV L L  CK+L  LP +I  LK L 
Sbjct: 341 ELPEVLENMGSLLELFLYGTAIKKLPSSIQHLSGLVLLNLRECKSLAILPHSIRKLKSLQ 400

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS- 767
           TL LSG SK    P+   S   L ++   GTAI+ LP SI LL    + + + CK L+S 
Sbjct: 401 TLILSGCSKLDNLPKGLGSLQGLEKLEAAGTAIKELPPSISLLENLEVLSFEGCKGLESN 460

Query: 768 ----------LPSTIN-----------GLRSLRMMYPSGCSKLKNV 792
                     LP+ I            GLRSLR +  S C+ L+  
Sbjct: 461 PRNSLPSFQLLPAEIGRSRGFQLHSFFGLRSLRKLNLSDCNILEGA 506


>gi|451799084|gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 158/503 (31%), Positives = 225/503 (44%), Gaps = 103/503 (20%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP  IE    L+ L L+ C+NL+SLP +I   K L TL  SGCS+L+ FP+I+ 
Sbjct: 1091 GSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 1149

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KLYL+GT+I E+PSSI+ L GL+ L L  CKNLV LP SI  L S KTL +S C
Sbjct: 1150 DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1209

Query: 134  CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
                 +PD LG+++SLE L V    ++     S+  + +LR+L   GCN           
Sbjct: 1210 PNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQGCN----------- 1258

Query: 193  LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                                               L E   PS+I  L SL  L L  N+
Sbjct: 1259 -----------------------------------LRE--FPSEIYYLSSLVTLSLGGNH 1281

Query: 253  FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKY 312
            F  +P  IS L NLE L L  CK LQ +P++P  L  + A+ C+SL  L     L  S  
Sbjct: 1282 FSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLENLSSRSNLLWS-- 1339

Query: 313  TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSI 372
            ++  C  S                  ++Q        ++ +   + IP+W  +Q  G  I
Sbjct: 1340 SLFKCFKS------------------QIQGREFRKTLITFIAESNGIPEWISHQKSGFKI 1381

Query: 373  TVTRPSYLYNVNKVVGFAIC--CV---FQVPKH-----------STGTYLFHSYPAHELE 416
            T+  P   Y  +  +GF +C  CV    +  KH            +  + + S+   E  
Sbjct: 1382 TMKLPWSWYENDDFLGFVLCSLCVPLEIETKKHRCFNCKLNFDDDSAYFSYQSFQFCEFC 1441

Query: 417  CSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPR--HGHNWQFESNLIRLSFRSISDPTWK 474
               D S +G  IY+                +P+  H + W+  +    + F     P  K
Sbjct: 1442 YDEDASSQGCLIYYPKS------------RIPKRYHSNEWRTLNAFFNVYFG--VKPV-K 1486

Query: 475  VKRCGFHPIYMHEVEEFDETTKQ 497
            V RCGFH +Y H+ E+ + T  Q
Sbjct: 1487 VARCGFHFLYAHDYEQNNLTIVQ 1509



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 148/304 (48%), Gaps = 43/304 (14%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL  LP  I   K L+TL+ +GC KLE  P+  G +  L  LD+SGT
Sbjct: 647 VPNLEILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGT 706

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI  +  L++L    C            L  + +    C ++          S
Sbjct: 707 AIMDLPSSITHLNGLQTLLLQEC------------LKLHQIPNHICHLS----------S 744

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L +LDL  C + E  IPSDI +L SL++L L + +F ++P +I+ L  LE L L  C  L
Sbjct: 745 LKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNL 804

Query: 278 QSLPQIPPNLQFVRANGC--SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR 335
           + +P++P  L+ + A+G   +S   LF  L      ++++NC    + L++   + S  R
Sbjct: 805 EQIPELPSRLRLLDAHGSNRTSSRALFLPL------HSLVNCFSWAQGLKRTSFSDSSYR 858

Query: 336 EYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
                      G    IV P +  IP+W M + +        P   +  N+ +GFA+CCV
Sbjct: 859 -----------GKGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCV 907

Query: 395 FQVP 398
           + VP
Sbjct: 908 Y-VP 910



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 1/154 (0%)

Query: 29  GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSI 88
            LE+LTL+GC NL  LP  I   K L+TL  +GCSKL++FP+I   M +L  L L GT+I
Sbjct: 649 NLEILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAI 708

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVE 147
            ++PSSI  L GL+ L L EC  L ++P+ I  L SLK L+L  C  +E  +P  +  + 
Sbjct: 709 MDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLS 768

Query: 148 SLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           SL++L++         ++I  +  L  L  S CN
Sbjct: 769 SLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCN 802



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ + IE    L  L L  C+NL  LP +I   K L+TL+ SG S+   FPEI  
Sbjct: 1091 GSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 1149

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L +++L GTAI+ +P+SI+ L G     L++CKNL +LP +I  L S + +  S C
Sbjct: 1150 DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1209

Query: 787  SKLKNVTETLGKVESLE 803
                 + + LG+++SLE
Sbjct: 1210 PNFNKLPDNLGRLQSLE 1226



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 24/180 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  LYL+GT+I E+PSSI+ L GL+ L L+ CKNL +LP +I +L   +TL +S
Sbjct: 1148 LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1207

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             C    K P  +  ++ L  L+     +  + S    LP                  S++
Sbjct: 1208 RCPNFNKLPDNLGRLQSLEYLF-----VGHLDSMNFQLP------------------SLS 1244

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            GL SL+TL L G C L   P  +  + SL  L + G    R    I  + NL +LY   C
Sbjct: 1245 GLCSLRTLKLQG-CNLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHC 1303



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 11/154 (7%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLE LPR I   K+L TL+ +G SK   FPEI     +L  + L GTAI  LP
Sbjct: 653 LTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLP 712

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
           +SI  L+G     L++C  L  +P+ I  L SL+ +    C    N+ E  G + S    
Sbjct: 713 SSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHC----NIME--GGIPSDICH 766

Query: 806 LSSWNRPKM-QNDFDCVEQSAVETVTKLAKAELL 838
           LSS  +  + Q  F     S   T+ +L++ E+L
Sbjct: 767 LSSLQKLNLEQGHF----SSIPTTINQLSRLEVL 796



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             M++L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P  I  L  L+ L+L  
Sbjct: 693 GDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGH 752

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 753 CNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 808



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 38/180 (21%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I+Q +        +GT I+E+  +I+ L GL  L L  CKNL  LP 
Sbjct: 1138 CSQL----ESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPE 1193

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLE-------------------------I 734
            +I  L    TL +S    F + P+    R Q LE                         +
Sbjct: 1194 SICNLTSFKTLVVSRCPNFNKLPD-NLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTL 1252

Query: 735  HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             L+G  +R  P+ I  LS  +  +L    +   +P  I+ L +L  +Y   C  L+++ E
Sbjct: 1253 KLQGCNLREFPSEIYYLSSLVTLSLGG-NHFSRIPDGISQLYNLENLYLGHCKMLQHIPE 1311


>gi|225464430|ref|XP_002264399.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1673

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 174/562 (30%), Positives = 256/562 (45%), Gaps = 94/562 (16%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G    E+P+ IE    L+ L L+ C+ L SLP  I  LK L++L  SGCS+LK FP
Sbjct: 1138 LCLAGNEFYELPT-IECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFP 1196

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +IV +ME+L KLYL+ T+I E+PSSI+ L GL+ L +  C NLV LP SI  L SLK L 
Sbjct: 1197 EIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLV 1256

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            +  C KL  +P+ LG + SLEEL  + +                  Y  GC  P  S   
Sbjct: 1257 VDCCPKLYKLPENLGSLRSLEELYATHS------------------YSIGCQLPSLSGLC 1298

Query: 190  HLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
             L +   L  ++S      +P+ +  + SL  L+LS+  L E  IP +I NL SL+ L L
Sbjct: 1299 SLRI---LDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLL 1355

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
              N+F ++P  IS L  L  L+L  C+ L  +P+   +LQ +  + C+SL TL     L 
Sbjct: 1356 GGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLL 1415

Query: 309  RSKYTIINCIDSL--KLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP-GSQIPKWFMY 365
            +S   ++ C  SL   L  +N + I       E          +SI  P  S IP+W  Y
Sbjct: 1416 QS--CLLKCFKSLIQDLELENDIPI-------EPHVAPYLNGGISIAIPRSSGIPEWIRY 1466

Query: 366  QNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH----------------- 408
            Q EGS +    P   Y  +  +GFA+  +  VP       LF                  
Sbjct: 1467 QKEGSKVAKKLPRNWYKNDDFLGFALFSI-HVPLDYESDDLFDNQDTWSSESDIEYEDEI 1525

Query: 409  -------SYPAHELECSMDGS-----------GEGHYIYFRGKFGH----------VVSD 440
                   S P +E E  +D             G+ H  +F+                V +
Sbjct: 1526 DNQETPSSEPDNESEDGLDNENTWSLECELTIGDDHRFWFKDHVSFQCCCKCDIDDDVPN 1585

Query: 441  HLWLLFLPRHGHNWQFESN---LIRLSFRSI--SDPTWKVKRCGFHPIYMHEVEEFDETT 495
             +W+ + P+     ++ SN    ++ SF+     +P  +V++CG   IY  + E+    +
Sbjct: 1586 QVWVTYYPKIIIPMKYASNKRRRLKASFQGFFCGEPV-EVEKCGIQLIYARDDEQ-KIIS 1643

Query: 496  KQSTRFTSCN------LNEVHH 511
            +Q     SC+       +E HH
Sbjct: 1644 RQDDAKRSCDDVEDNPADEPHH 1665



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 206/507 (40%), Gaps = 146/507 (28%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            IT VP+       LE+L L+GC NL SLP  I  LK LRTL    C KL+ FP+I   M+
Sbjct: 651  ITSVPN-------LEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMK 703

Query: 77   DLSKLYLDGTSIAEVP-SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            +L +LYL  T + E+P SS + L GL  L L  C+NL+ +P SI  ++SLK L+ S C K
Sbjct: 704  NLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPK 763

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            L+ +P+ L  +  LE L                     SL F  C               
Sbjct: 764  LDKLPEDLESLPCLESL---------------------SLNFLRCE-------------- 788

Query: 196  NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD------------------- 236
                         LP L+G+ SL +L L    +    IP+D                   
Sbjct: 789  -------------LPCLSGLSSLKELSLDQSNITGEVIPNDNGLSSLKSLSLNYNRMERG 835

Query: 237  ----IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
                I  L SL+EL L  N+F T+PA IS L  L  L L  CK+L  +P++P +L+ +  
Sbjct: 836  ILSNIFCLSSLEELKLRGNHFSTIPAGISKLPRLRSLNLSHCKKLLQIPELPSSLRALDT 895

Query: 293  NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
            +G  S VTL          ++++ C  S         AI            +D      +
Sbjct: 896  HG--SPVTLSSG------PWSLLKCFKS---------AIQE----------TDCNFTKVV 928

Query: 353  VFPG-SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS-- 409
              PG S IPKW     +GS      P   Y  N  +GF+I C + +  + +     +S  
Sbjct: 929  FIPGDSGIPKWINGFQKGSYAERMLPQNWYQDNMFLGFSIGCAYVLLDNESDREFDYSSE 988

Query: 410  -------------------------YPAHELECSMDGSGEGHYI----YFRGKFG----- 435
                                     + +H LEC +   GEG  +    +F   F      
Sbjct: 989  NESEHTSSDESDYSSENEESQKKSAHTSHNLECHLIMEGEGDDLRDLEHFPFPFDCECYE 1048

Query: 436  ---HVVSDHLWLLFLPRHGHNWQFESN 459
                 VSD +W+++ P+      F SN
Sbjct: 1049 DDEDGVSDQMWVMYYPKVAIPENFHSN 1075



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G +  EL   IE    L  L L  C+ LE LP  I  LK L +L  SG S+ + FPEI  
Sbjct: 1142 GNEFYELP-TIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIVE 1200

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            + + L +++L  TAI  LP+SI+ L G    +++ C NL SLP +I  L SL+++    C
Sbjct: 1201 NMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVDCC 1260

Query: 787  SKLKNVTETLGKVESLE 803
             KL  + E LG + SLE
Sbjct: 1261 PKLYKLPENLGSLRSLE 1277



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 7/185 (3%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +M++L  LYL+ T+I E+PSSI+ L GL+ L+++ C NL SLP +I +L  L+ L + 
Sbjct: 1199 VENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVD 1258

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN----LVRLP 116
             C KL K P+ + S+  L +LY   T    +   +  L GL  L + + +N       +P
Sbjct: 1259 CCPKLYKLPENLGSLRSLEELY--ATHSYSIGCQLPSLSGLCSLRILDIQNSNLSQRAIP 1316

Query: 117  SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
            + I  L SLK LNLS    +E  +P  +  + SL+ L + G         I  +  LR L
Sbjct: 1317 NDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALRVL 1376

Query: 176  YFSGC 180
              S C
Sbjct: 1377 DLSHC 1381



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GC NL  LP  I  LK L TL      K R FPEI      L E++L  T ++ LP
Sbjct: 660 LILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELP 719

Query: 746 -ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +S + L G    +L  C+NL  +P +I  +RSL+ +  S C KL  + E L  +  LE
Sbjct: 720 SSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLE 778



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 58/229 (25%)

Query: 4   MKDLSDLYLDGTSITEVPSS-IELLTGLELLTLKGCKNL--------------------- 41
           MK+L +LYL  T + E+PSS  + L GL  L L GC+NL                     
Sbjct: 702 MKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYC 761

Query: 42  ---SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA--------- 89
                LP  + SL CL +L L+    L+     ++ +  L +L LD ++I          
Sbjct: 762 PKLDKLPEDLESLPCLESLSLNF---LRCELPCLSGLSSLKELSLDQSNITGEVIPNDNG 818

Query: 90  ----------------EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
                            + S+I  L  LE L L    +   +P+ I+ L  L++LNLS C
Sbjct: 819 LSSLKSLSLNYNRMERGILSNIFCLSSLEELKL-RGNHFSTIPAGISKLPRLRSLNLSHC 877

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS-LYFSGCN 181
            KL  +P+      SL  LD  G+ +   +    L+K  +S +  + CN
Sbjct: 878 KKLLQIPELPS---SLRALDTHGSPVTLSSGPWSLLKCFKSAIQETDCN 923



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 89/229 (38%), Gaps = 59/229 (25%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFG--LVQL 686
           ++ G + VR++ P+EPG  SRLW+      D+ +VL+  T    +   I  +     +Q 
Sbjct: 481 QQMGHEIVRQECPKEPGKWSRLWDPE----DVYRVLTKNTGTEAIEGIILDISASEQIQF 536

Query: 687 TLNGCKNLERLPRTI--------SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           T    K + RL   I        S +++    +   LSK            +L  +H +G
Sbjct: 537 TTEAFKMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDG 596

Query: 739 TAIRGLPASI----------------ELLSGNILSN------------------------ 758
            ++  LP++                 +L  GN++ N                        
Sbjct: 597 YSLESLPSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPN 656

Query: 759 -----LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                L+ C NL SLPS I  L+ LR +    C KL++  E   ++++L
Sbjct: 657 LEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNL 705



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)

Query: 657 FPDIVQVLSD-------GTDIREL-SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           FP+I + + +        TD++EL S + + L GL  L L GC+NL  +P++I A++ L 
Sbjct: 695 FPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLK 754

Query: 709 TLNLSGLSKFREFPE 723
            L+ S   K  + PE
Sbjct: 755 ALSFSYCPKLDKLPE 769



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 653  EADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
            E   FP+IV+ + +        T I EL  +I+ L GL  L++  C NL  LP +I  L 
Sbjct: 1191 ELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLT 1250

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG--LPASIELLSGNILSNLKDCK 763
             L  L +    K  + PE   S   L E++   +   G  LP+   L S  IL       
Sbjct: 1251 SLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCSLRILDIQNSNL 1310

Query: 764  NLKSLPSTINGLRSLRMM 781
            + +++P+ I  L SL+++
Sbjct: 1311 SQRAIPNDICCLYSLKLL 1328


>gi|147812101|emb|CAN61526.1| hypothetical protein VITISV_036339 [Vitis vinifera]
          Length = 2047

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 174/562 (30%), Positives = 256/562 (45%), Gaps = 94/562 (16%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G    E+P+ IE    L+ L L+ C+ L SLP  I  LK L++L  SGCS+LK FP
Sbjct: 1080 LCLAGNEFYELPT-IECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFP 1138

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +IV +ME+L KLYL+ T+I E+PSSI+ L GL+ L +  C NLV LP SI  L SLK L 
Sbjct: 1139 EIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLV 1198

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            +  C KL  +P+ LG + SLEEL  + +                  Y  GC  P  S   
Sbjct: 1199 VDCCPKLYKLPENLGSLRSLEELYATHS------------------YSIGCQLPSLSGLC 1240

Query: 190  HLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
             L +   L  ++S      +P+ +  + SL  L+LS+  L E  IP +I NL SL+ L L
Sbjct: 1241 SLRI---LDIQNSNLSQRAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLL 1297

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
              N+F ++P  IS L  L  L+L  C+ L  +P+   +LQ +  + C+SL TL     L 
Sbjct: 1298 GGNHFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLL 1357

Query: 309  RSKYTIINCIDSL--KLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP-GSQIPKWFMY 365
            +S   ++ C  SL   L  +N + I       E          +SI  P  S IP+W  Y
Sbjct: 1358 QS--CLLKCFKSLIQDLELENDIPI-------EPHVAPYLNGGISIAIPRSSGIPEWIRY 1408

Query: 366  QNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH----------------- 408
            Q EGS +    P   Y  +  +GFA+  +  VP       LF                  
Sbjct: 1409 QKEGSKVAKKLPRNWYKNDDFLGFALFSI-HVPLDYESDDLFDNQDTWSSESDIEYEDEI 1467

Query: 409  -------SYPAHELECSMDGS-----------GEGHYIYFRGKFGH----------VVSD 440
                   S P +E E  +D             G+ H  +F+                V +
Sbjct: 1468 DNQETPSSEPDNESEDGLDNENTWSLECELTIGDDHRFWFKDHVSFQCCCKCDIDDDVPN 1527

Query: 441  HLWLLFLPRHGHNWQFESN---LIRLSFRSI--SDPTWKVKRCGFHPIYMHEVEEFDETT 495
             +W+ + P+     ++ SN    ++ SF+     +P  +V++CG   IY  + E+    +
Sbjct: 1528 QVWVTYYPKIIIPMKYASNKRRRLKASFQGFFCGEPV-EVEKCGIQLIYARDDEQ-KIIS 1585

Query: 496  KQSTRFTSCN------LNEVHH 511
            +Q     SC+       +E HH
Sbjct: 1586 RQDDAKRSCDDVEDNPADEPHH 1607



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 202/506 (39%), Gaps = 128/506 (25%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            +L+ L+ DG S+  +PS+ +    +EL     C N+  L         L+ + LS    L
Sbjct: 588  ELTFLHWDGYSLESLPSNFQADNLVELHL--RCSNIKQLCEGNMIFNILKVINLSFSVHL 645

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
             K P I +                        +P LE+L L  C NL+ LPS I  LK L
Sbjct: 646  IKIPDITS------------------------VPNLEILILEGCTNLMSLPSDIYKLKGL 681

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEPP 184
            +TL    C KL + P+   ++++L EL +S T ++  P+SS   +K L  L  +GC    
Sbjct: 682  RTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNL- 740

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                  +H+P     KS C +           SL  L  S C   +  +P D+++L  L+
Sbjct: 741  ------IHVP-----KSICAMR----------SLKALSFSYCPKLDK-LPEDLESLPCLE 778

Query: 245  ELYLN-----------RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
             L LN            N+F T+PA IS L  L  L L  CK+L  +P++P +L+ +  +
Sbjct: 779  SLSLNFLRCELPCXVRGNHFSTIPAGISKLPRLRSLNLSHCKKLLQIPELPSSLRALDTH 838

Query: 294  GCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
            G  S VTL          ++++ C  S         AI            +D      + 
Sbjct: 839  G--SPVTLSSG------PWSLLKCFKS---------AIQE----------TDCNFTKVVF 871

Query: 354  FPG-SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS--- 409
             PG S IPKW     +GS      P   Y  N  +GF+I C + +  + +     +S   
Sbjct: 872  IPGDSGIPKWINGFQKGSYAERMLPQNWYQDNMFLGFSIGCAYVLLDNESDREFDYSSEN 931

Query: 410  ------------------------YPAHELECSMDGSGEGHYI----YFRGKFG------ 435
                                    + +H LEC +   GEG  +    +F   F       
Sbjct: 932  ESEHTSSDESDYSSENEESQKKSAHTSHNLECHLIMEGEGDDLRDLEHFPFPFDCECYED 991

Query: 436  --HVVSDHLWLLFLPRHGHNWQFESN 459
                VSD +W+++ P+      F SN
Sbjct: 992  DEDGVSDQMWVMYYPKVAIPENFHSN 1017



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G +  EL   IE    L  L L  C+ LE LP  I  LK L +L  SG S+ + FPEI  
Sbjct: 1084 GNEFYELP-TIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIVE 1142

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            + + L +++L  TAI  LP+SI+ L G    +++ C NL SLP +I  L SL+++    C
Sbjct: 1143 NMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVDCC 1202

Query: 787  SKLKNVTETLGKVESLE 803
             KL  + E LG + SLE
Sbjct: 1203 PKLYKLPENLGSLRSLE 1219



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 7/185 (3%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +M++L  LYL+ T+I E+PSSI+ L GL+ L+++ C NL SLP +I +L  L+ L + 
Sbjct: 1141 VENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLTSLKVLVVD 1200

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN----LVRLP 116
             C KL K P+ + S+  L +LY   T    +   +  L GL  L + + +N       +P
Sbjct: 1201 CCPKLYKLPENLGSLRSLEELY--ATHSYSIGCQLPSLSGLCSLRILDIQNSNLSQRAIP 1258

Query: 117  SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
            + I  L SLK LNLS    +E  +P  +  + SL+ L + G         I  +  LR L
Sbjct: 1259 NDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGNHFSSIPDGISRLTALRVL 1318

Query: 176  YFSGC 180
              S C
Sbjct: 1319 DLSHC 1323



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 12/136 (8%)

Query: 4   MKDLSDLYLDGTSITEVP-SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           MK+L +LYL  T + E+P SS + L GL  L L GC+NL  +P +I +++ L+ L  S C
Sbjct: 702 MKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYC 761

Query: 63  SKLKKFPQIVASMEDLSKLYLD-----------GTSIAEVPSSIELLPGLELLYLNECKN 111
            KL K P+ + S+  L  L L+           G   + +P+ I  LP L  L L+ CK 
Sbjct: 762 PKLDKLPEDLESLPCLESLSLNFLRCELPCXVRGNHFSTIPAGISKLPRLRSLNLSHCKK 821

Query: 112 LVRLPSSINGLKSLKT 127
           L+++P   + L++L T
Sbjct: 822 LLQIPELPSSLRALDT 837



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GC NL  LP  I  LK L TL      K R FPEI      L E++L  T ++ LP
Sbjct: 660 LILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELP 719

Query: 746 -ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +S + L G    +L  C+NL  +P +I  +RSL+ +  S C KL  + E L  +  LE
Sbjct: 720 SSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLE 778



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 19/151 (12%)

Query: 647 CSRLWEEADEFPDIVQVLSD-------GTDIREL-SLAIELLFGLVQLTLNGCKNLERLP 698
           C R   +   FP+I + + +        TD++EL S + + L GL  L L GC+NL  +P
Sbjct: 685 CCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVP 744

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQL-----------LEIHLEGTAIRGLPAS 747
           ++I A++ L  L+ S   K  + PE   S   L           L   + G     +PA 
Sbjct: 745 KSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSLNFLRCELPCXVRGNHFSTIPAG 804

Query: 748 IELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           I  L      NL  CK L  +P   + LR+L
Sbjct: 805 ISKLPRLRSLNLSHCKKLLQIPELPSSLRAL 835



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 89/229 (38%), Gaps = 59/229 (25%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFG--LVQL 686
           ++ G + VR++ P+EPG  SRLW+      D+ +VL+  T    +   I  +     +Q 
Sbjct: 481 QQMGHEIVRQECPKEPGKWSRLWDPE----DVYRVLTKNTGTEAIEGIILDISASEQIQF 536

Query: 687 TLNGCKNLERLPRTI--------SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           T    K + RL   I        S +++    +   LSK            +L  +H +G
Sbjct: 537 TTEAFKMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDG 596

Query: 739 TAIRGLPASI----------------ELLSGNILSN------------------------ 758
            ++  LP++                 +L  GN++ N                        
Sbjct: 597 YSLESLPSNFQADNLVELHLRCSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPN 656

Query: 759 -----LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                L+ C NL SLPS I  L+ LR +    C KL++  E   ++++L
Sbjct: 657 LEILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNL 705



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 653  EADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
            E   FP+IV+ + +        T I EL  +I+ L GL  L++  C NL  LP +I  L 
Sbjct: 1133 ELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICNLT 1192

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG--LPASIELLSGNILSNLKDCK 763
             L  L +    K  + PE   S   L E++   +   G  LP+   L S  IL       
Sbjct: 1193 SLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCSLRILDIQNSNL 1252

Query: 764  NLKSLPSTINGLRSLRMM 781
            + +++P+ I  L SL+++
Sbjct: 1253 SQRAIPNDICCLYSLKLL 1270


>gi|449482311|ref|XP_004156244.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1676

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 164/513 (31%), Positives = 249/513 (48%), Gaps = 60/513 (11%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             A++ +L  L L D TS+  +  SI     L  L+LK C NL++LP  I+ +K L  L L
Sbjct: 1190 FANIPNLKRLELEDCTSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHIN-IKVLEVLIL 1248

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSK+KK P+   +   L +L+LDGTSI+ +PSSI  L  L +L L  CK L+ + ++I
Sbjct: 1249 SGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAI 1308

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT---SSIFLMKNLRSLY 176
              + SL++L++SGC KL +       VE L E++V  T  RR     ++IF     + ++
Sbjct: 1309 E-MTSLQSLDVSGCSKLGSRKGKGDNVE-LGEVNVRETTRRRRNDDCNNIF-----KEIF 1361

Query: 177  FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
               CN P             + G         +PSL G+ SLTKL+L DC L    IP  
Sbjct: 1362 LWLCNTPATG----------IFG---------IPSLAGLYSLTKLNLKDCNL--EVIPQG 1400

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            I+ + SL EL L+ NNF  LP SIS L NL+ L +  CK+L   P++PP + F+ +  C 
Sbjct: 1401 IECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCI 1460

Query: 297  SLVTLFGALKL----CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
            SL       K+       +  ++NC         + L IS +++    +         +I
Sbjct: 1461 SLKDFIDISKVDNLYIMKEVNLLNCYQMANNKDFHRLIISSMQKMFFRKGT------FNI 1514

Query: 353  VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS-----TGTYLF 407
            + PGS+IP WF  +  GSS+ +       N N ++ FA+C V  +   S     +   + 
Sbjct: 1515 MIPGSEIPDWFTTRKMGSSVCMEWDPDAPNTN-MIRFALCVVIGLSDKSDVCNVSSFTII 1573

Query: 408  HSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFR- 466
             S    +   +   +G+   +      G    DH+W+  LPR G   +  SN   + FR 
Sbjct: 1574 ASVTGKDRNDTNLKNGDDLLVDAFLVSGMKKLDHIWMFVLPRTGTLLRKISNYKEIKFRF 1633

Query: 467  ---------SISDPTWKVKRCGFHPIYMHEVEE 490
                     SI+ P  +VK+CG   I + E +E
Sbjct: 1634 LLQAANYRQSIT-PNVEVKKCGVGLINLEEEKE 1665



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 2/154 (1%)

Query: 664  LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            L D T +  +  +I     L+ L+L  C NL  LP  I+ +K L  L LSG SK ++ PE
Sbjct: 1201 LEDCTSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHIN-IKVLEVLILSGCSKVKKVPE 1259

Query: 724  ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
             + + ++LL++HL+GT+I  LP+SI  LS   + +L +CK L  + + I  + SL+ +  
Sbjct: 1260 FSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAIE-MTSLQSLDV 1318

Query: 784  SGCSKLKNVTETLGKVESLEVRLSSWNRPKMQND 817
            SGCSKL +       VE  EV +    R +  +D
Sbjct: 1319 SGCSKLGSRKGKGDNVELGEVNVRETTRRRRNDD 1352


>gi|399920191|gb|AFP55538.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1320

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 169/555 (30%), Positives = 253/555 (45%), Gaps = 97/555 (17%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               +++L  L L+G T++ ++  SI LL  L++   + CK++ SLP  ++ ++ L T ++
Sbjct: 701  FTGIQNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDV 759

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLK  P+ V  M+ LSK  L GT++ ++PSS E L                     
Sbjct: 760  SGCSKLKMIPEFVGQMKRLSKFCLGGTAVEKLPSSFEHLS-------------------- 799

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                                       ESL ELD+SG  IR    S FL   L++L  S 
Sbjct: 800  ---------------------------ESLVELDLSGIVIREQPYSFFL--KLQNLRVSV 830

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C   P               KS  P+  +L SL     LT+L+LSDC L E  IP+DI +
Sbjct: 831  CGLFPR--------------KSPHPLIPVLASLKHFSYLTELNLSDCNLCEGEIPNDIGS 876

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRANGCSS 297
            L SLK L L  NNFV+LPASI  L  L  +++E+C RLQ LP++PP  +   V  + C+S
Sbjct: 877  LSSLKYLELGGNNFVSLPASIRLLSKLRHIDVENCTRLQQLPELPPASDRILVTTDNCTS 936

Query: 298  LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
            L        L R     ++C + L     +    S+L+  +E    S     L  + PGS
Sbjct: 937  LQVFPDPPDLSRVSEFWLDCSNCLSCQDSSYFLHSVLKRLVEETPCS--FESLKFIIPGS 994

Query: 358  QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELEC 417
            +IP+WF  Q+ G S+T   P    N +K +GFA+C +  VP+ +         P  + + 
Sbjct: 995  EIPEWFNNQSVGDSVTEKLPLDACN-SKWIGFAVCALI-VPQDNPSA--VPEDPNLDPDI 1050

Query: 418  SMDGS-------GEGHYIYFRGK---FGHVVSDHLWLLFLP--------RHGHNWQFESN 459
             +D           G+ I   G+       VSDHL L+ LP        R    W  E  
Sbjct: 1051 CLDPDTCLIYCLSNGYGICCVGRRIPVKQFVSDHLLLVVLPSPFRCPEDRLADWWNDE-- 1108

Query: 460  LIRLSFRSI-SDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNM 518
             +   F+++ ++   KVK+CG   +Y H+ EE      QS + +S ++ E   +  G+ M
Sbjct: 1109 -VTFFFKAVGNNRCIKVKKCGVRALYEHDTEELTSKMNQS-KSSSISVYEAMDEQEGA-M 1165

Query: 519  EVAQASGSGSSQWKW 533
              A    +    W W
Sbjct: 1166 VKATGGRNKRELWHW 1180



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL   T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG SK +  P
Sbjct: 711 VLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIP 769

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           E      +L +  L GTA+  LP+S E LS +++
Sbjct: 770 EFVGQMKRLSKFCLGGTAVEKLPSSFEHLSESLV 803



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDC 762
           L  L +++LS        P+ T  ++ L ++ LEG T +  +  SI LL    + N ++C
Sbjct: 681 LGKLKSIDLSYSINLTRTPDFTGIQN-LEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNC 739

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWNRPKMQNDFDCV 821
           K++KSLPS +N +  L     SGCSKLK + E +G+++ L +  L      K+ + F+ +
Sbjct: 740 KSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQMKRLSKFCLGGTAVEKLPSSFEHL 798

Query: 822 EQSAVE 827
            +S VE
Sbjct: 799 SESLVE 804


>gi|296089437|emb|CBI39256.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 166/517 (32%), Positives = 249/517 (48%), Gaps = 47/517 (9%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + E PS   ++  LE+LTL+GC +L  LP+ I  L+ L+TL    CSKL+ FP+I  +M+
Sbjct: 512  LMEFPS-FSMMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMK 570

Query: 77   DLSKLYLDGTSIAEVP-SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            +L KL L GT+I ++P SSIE L GLE L L  CKNLV LP +I  L+ LK LN++ C K
Sbjct: 571  NLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICSLRFLKFLNVNACSK 630

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG-CNEPPASASWHLHLP 194
            L  + ++L  ++ LEEL +       PT S   + +LR L+ +G C  P    S      
Sbjct: 631  LHRLMESLESLQCLEELYLGWLNCELPTLSG--LSSLRVLHLNGSCITPRVIRSHEFLSL 688

Query: 195  FNLLGKSSCPVAL-MLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
               L  S C V    L  +  + SL +LDLS+C L +  IP DI  L SL+ L L+  N 
Sbjct: 689  LEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNI 748

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT----LFGALKLC- 308
              +PASI  L  L+ L L  CK+LQ   ++P +++F+  +     ++    L+G L  C 
Sbjct: 749  HKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFLDGHDSFKSLSWQRWLWGFLFNCF 808

Query: 309  RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNE 368
            +S+   + C        + G         ++       G  +SIV P  ++P W  YQN 
Sbjct: 809  KSEIQDVEC--------RGGW------HDIQFGQSGFFGKGISIVIP--RMPHWISYQNV 852

Query: 369  GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY- 427
            G+ I +  P   Y  N  +GFA+C V+   +++ G     SY    L C +   G+    
Sbjct: 853  GNEIKIELPMDWYEDNDFLGFALCAVYVPLENTLGDVPTMSY---RLSCHLSLCGDQFRD 909

Query: 428  ---------IYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIR---LSFRSISDPTWKV 475
                      Y RG+     S+ +W+   P+     +  SN  R    SF      ++KV
Sbjct: 910  SLSFYSVCECYCRGE----SSNQVWMTCYPQIAIQEKHRSNKWRQFAASFVGYVTGSFKV 965

Query: 476  KRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHD 512
             +CG   IY  + +        S   + C  N  H +
Sbjct: 966  IKCGVTLIYEQKSKLLGSVENVSVTCSECQTNGEHEE 1002



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 215/439 (48%), Gaps = 46/439 (10%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L  T+I E+ + IE L+G++ L L+ CK L SLP  I  LK L T   SGCSKL+ FP
Sbjct: 1004 LCLGETAINELLN-IECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFP 1062

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I   M+ L +L LDGTS+ E+PSSI+ L GL+ L L  CKNL+ +P +I  L+SL+TL 
Sbjct: 1063 EITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLI 1122

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            +SGC KL  +P  LG +  L  L     A R  + S              C  P  S   
Sbjct: 1123 VSGCSKLNKLPKNLGSLTQLRLL----CAARLDSMS--------------CQLPSFSDLR 1164

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             L +  N L +S+     +   ++ + SL ++DLS C L E  IPS+I  L SL+ LYL 
Sbjct: 1165 FLKI-LN-LDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLK 1222

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             N+F ++P+ I  L  L+ L+L  C+ LQ +P++P +L+ + A+GC  +     +     
Sbjct: 1223 GNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLDAHGC--IRLESLSSPQSL 1280

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
               ++  C  S        L   M+   L LQ     G  + ++   S I +   +Q  G
Sbjct: 1281 LLSSLFKCFKS----EIQELECRMVLSSLLLQGFFYHGVNI-VISESSGILEGTWHQ--G 1333

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY 429
            S +T+  P   Y  N  +GFA+C  +    +                 S DG G+G+   
Sbjct: 1334 SQVTMELPWNWYENNNFLGFALCSAYSSLDNE----------------SEDGDGDGYPCT 1377

Query: 430  FRGKFGHVVSDHLWLLFLP 448
            F+       S+  W   LP
Sbjct: 1378 FKCCLTFWASESGWQCELP 1396



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 1/137 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I EL L IE L G+  L L  CK LE LP  I  LK L+T + SG SK + FPEIT  
Sbjct: 1009 TAINEL-LNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITED 1067

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
               L E+ L+GT+++ LP+SI+ L G    +L++CKNL ++P  I  LRSL  +  SGCS
Sbjct: 1068 MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 1127

Query: 788  KLKNVTETLGKVESLEV 804
            KL  + + LG +  L +
Sbjct: 1128 KLNKLPKNLGSLTQLRL 1144



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 28/210 (13%)

Query: 3   SMKDLSDLYLDGTSITEVPSS-IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +MK+L  L L GT+I ++PSS IE L GLE L L  CKNL  LP  I SL+ L+ L ++ 
Sbjct: 568 TMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICSLRFLKFLNVNA 627

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN-------------- 107
           CSKL +  + + S++ L +LYL G    E+P ++  L  L +L+LN              
Sbjct: 628 CSKLHRLMESLESLQCLEELYL-GWLNCELP-TLSGLSSLRVLHLNGSCITPRVIRSHEF 685

Query: 108 ----------ECKNLVRLPSSINGLKSLKTLNLSGCCKL-ENVPDTLGKVESLEELDVSG 156
                     +C+ +      I  L SLK L+LS C  + E +PD + ++ SL+ LD+SG
Sbjct: 686 LSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSG 745

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           T I +  +SI  +  L+ L+   C +   S
Sbjct: 746 TNIHKMPASIHHLSKLKFLWLGHCKQLQGS 775



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 70/125 (56%), Gaps = 1/125 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC +L+RLP  I  L++L TL+    SK   FPEI  +   L ++ L GTAI  LP
Sbjct: 527 LTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIEKLP 586

Query: 746 -ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            +SIE L G    NL  CKNL  LP  I  LR L+ +  + CSKL  + E+L  ++ LE 
Sbjct: 587 SSSIEHLEGLEYLNLAHCKNLVILPENICSLRFLKFLNVNACSKLHRLMESLESLQCLEE 646

Query: 805 RLSSW 809
               W
Sbjct: 647 LYLGW 651



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 9/183 (4%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            MK L +L LDGTS+ E+PSSI+ L GL+ L L+ CKNL ++P  I +L+ L TL +SGCS
Sbjct: 1068 MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 1127

Query: 64   KLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--LPSS 118
            KL K P+ + S+  L  L    LD  S  ++PS  + L  L++L L+   NLV   + S 
Sbjct: 1128 KLNKLPKNLGSLTQLRLLCAARLDSMS-CQLPSFSD-LRFLKILNLDR-SNLVHGAIRSD 1184

Query: 119  INGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            I+ L SL+ ++LS C   E  +P  +  + SL+ L + G       S I  +  L+ L  
Sbjct: 1185 ISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDL 1244

Query: 178  SGC 180
            S C
Sbjct: 1245 SHC 1247



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L      FP+I + +        DGT ++EL  +I+ L GL  L L  CKNL  +P 
Sbjct: 1055 CSKL----QSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPD 1110

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
             I  L+ L TL +SG SK  + P+   S  QL
Sbjct: 1111 NICNLRSLETLIVSGCSKLNKLPKNLGSLTQL 1142



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 646 NCSRLWEEADEFPDIVQVLSD-------GTDIREL-SLAIELLFGLVQLTLNGCKNLERL 697
           +CS+L    + FP+I   + +       GT I +L S +IE L GL  L L  CKNL  L
Sbjct: 555 DCSKL----EYFPEIKYTMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVIL 610

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           P  I +L++L  LN++  SK     E   S   L E++L
Sbjct: 611 PENICSLRFLKFLNVNACSKLHRLMESLESLQCLEELYL 649


>gi|45544513|dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 199/384 (51%), Gaps = 29/384 (7%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +++ EV  S+   + +  L L  CK+L   P    +++ L  L L  C  L+K P+I   
Sbjct: 645  SNLEEVHHSLGCCSKVIGLYLNDCKSLKRFPCV--NVESLEYLGLRSCDSLEKLPEIYGR 702

Query: 75   MEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            M+   ++++ G+ I E+PSSI +    +  L L   KNLV LPSSI  LKSL +L++SGC
Sbjct: 703  MKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGC 762

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             KLE++P+ +G +++L   D S T I RP SSI  +  L  L F G  +       H   
Sbjct: 763  SKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKD-----GVHFEF 817

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
            P         PVA       G+ SL  L+LS C L +  +P DI +L SLK+L L+RNNF
Sbjct: 818  P---------PVA------EGLHSLEYLNLSYCNLIDGGLPEDIGSLSSLKKLDLSRNNF 862

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
              LP+SI+ L  L+ L+L+DC+RL  LP++PP L  +  + C   +     L   R K  
Sbjct: 863  EHLPSSIAQLGALQSLDLKDCQRLTQLPELPPELNELHVD-CHMALKFIHDLVTKRKKLH 921

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI-VFPGS----QIPKWFMYQNE 368
             +   D+      N  A +M +    ++        LS+ VF G     +IP WF +Q  
Sbjct: 922  RVKLDDAHNDTMYNLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYPEKIPSWFHHQGW 981

Query: 369  GSSITVTRPSYLYNVNKVVGFAIC 392
             SS++V  P   Y  +K +GFA+C
Sbjct: 982  DSSVSVNLPENWYIPDKFLGFAVC 1005



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 96/181 (53%), Gaps = 4/181 (2%)

Query: 4   MKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           MK    +++ G+ I E+PSSI +  T +  L L   KNL +LP +I  LK L +L +SGC
Sbjct: 703 MKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGC 762

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--LPSSIN 120
           SKL+  P+ +  +++L       T I   PSSI  L  L +L     K+ V    P    
Sbjct: 763 SKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFEFPPVAE 822

Query: 121 GLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           GL SL+ LNLS C  ++  +P+ +G + SL++LD+S        SSI  +  L+SL    
Sbjct: 823 GLHSLEYLNLSYCNLIDGGLPEDIGSLSSLKKLDLSRNNFEHLPSSIAQLGALQSLDLKD 882

Query: 180 C 180
           C
Sbjct: 883 C 883



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 5/124 (4%)

Query: 683 LVQLTLNGCKNLERLP-RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
           ++ L LN CK+L+R P   + +L+YL   +   L K    PEI       ++IH++G+ I
Sbjct: 660 VIGLYLNDCKSLKRFPCVNVESLEYLGLRSCDSLEKL---PEIYGRMKPEIQIHMQGSGI 716

Query: 742 RGLPASIELLSGNILSNL-KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           R LP+SI     ++   L  + KNL +LPS+I  L+SL  +  SGCSKL+++ E +G ++
Sbjct: 717 RELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLD 776

Query: 801 SLEV 804
           +L V
Sbjct: 777 NLRV 780



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 6/148 (4%)

Query: 661 VQVLSDGTDIRELSLAI-ELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR 719
           +Q+   G+ IREL  +I +    + +L L   KNL  LP +I  LK L +L++SG SK  
Sbjct: 707 IQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLE 766

Query: 720 EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL---SNLKDCKNLKSLPSTINGLR 776
             PE     D L       T I   P+SI  L+  I+      KD  + +  P    GL 
Sbjct: 767 SLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFE-FPPVAEGLH 825

Query: 777 SLRMMYPSGCSKLK-NVTETLGKVESLE 803
           SL  +  S C+ +   + E +G + SL+
Sbjct: 826 SLEYLNLSYCNLIDGGLPEDIGSLSSLK 853


>gi|408537108|gb|AFU75207.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/288 (44%), Positives = 183/288 (63%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  LPSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS  L+KN + L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSTSLLKNPKHLSLRGCNALSSQVSSTSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P AS S L  L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASKSRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK + FP
Sbjct: 7   VLEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS  LL   + L L  C  L  ++ S+ +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSTSLLKNPKHLSLRGCNALSSQVSSTSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +S  
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASKS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 RLTQLRALALAGC 263



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + ELS ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S  LL      +L+ C 
Sbjct: 118 LKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSTSLLKNPKHLSLRGCN 177

Query: 764 NLKS-LPSTINGLRSLRMMY 782
            L S + ST +G +S+ + +
Sbjct: 178 ALSSQVSSTSHGQKSMGVKF 197


>gi|126571551|gb|ABO21407.1| TMV resistance protein N [Nicotiana tabacum]
          Length = 1141

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 145/397 (36%), Positives = 203/397 (51%), Gaps = 44/397 (11%)

Query: 9    DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGCSKLKK 67
            DLY   +++ EV  S+   + L  L L GCK+L   P V + SLK    L + GCS+L+K
Sbjct: 648  DLY-QCSNLEEVHHSLGCCSKLIQLILNGCKSLKKFPRVNVESLK---YLTVQGCSRLEK 703

Query: 68   FPQIVASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P+I   M+   ++++ G+ I E+PSSI +    +  L     KNLV LPSSI  LKSL 
Sbjct: 704  IPEIHGRMKPEIQIHMLGSGIRELPSSITQYQTHITKLLSWNMKNLVALPSSICRLKSLV 763

Query: 127  TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
            +L++ GC KLE++P+ +G +++L  LD   T I RP SSI  +  L  L F G  +    
Sbjct: 764  SLSVPGCSKLESLPEEIGDLDNLRVLDARDTLILRPPSSIVRLNKLIILMFGGFKDVV-- 821

Query: 187  ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
               +   P         PVA       G+ SL  LDL+ C L +  +P DI +L SLK+L
Sbjct: 822  ---NFEFP---------PVA------EGLRSLEHLDLTCCNLIDGGLPEDIGSLSSLKKL 863

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
             L+RNNF  LP SI+ L  L  L+L+DC+RL  LP++PP L  +R       V    ALK
Sbjct: 864  DLSRNNFEHLPPSIAQLGALRSLDLKDCQRLTQLPELPPELSELR-------VDCHMALK 916

Query: 307  LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI-------VFPGS-- 357
                  T    +  LKL   +   I  L  +   Q +S   H +S        VF G   
Sbjct: 917  FIHDLVTKRKKLGRLKLDDAHNDTIYNLFAHALFQNISSMRHDISASDSLSLRVFTGQLY 976

Query: 358  --QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAIC 392
              +IP WF +Q   SS+ V  P   Y  +K +GFA+C
Sbjct: 977  LVKIPSWFHHQGWDSSVLVNLPGNWYIPDKFLGFAVC 1013



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 9/151 (5%)

Query: 656 EFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT-ISALKYLSTLNLSG 714
           E+ D+ Q     +++ E+  ++     L+QL LNGCK+L++ PR  + +LKYL+   + G
Sbjct: 645 EYVDLYQC----SNLEEVHHSLGCCSKLIQLILNGCKSLKKFPRVNVESLKYLT---VQG 697

Query: 715 LSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK-DCKNLKSLPSTIN 773
            S+  + PEI       ++IH+ G+ IR LP+SI     +I   L  + KNL +LPS+I 
Sbjct: 698 CSRLEKIPEIHGRMKPEIQIHMLGSGIRELPSSITQYQTHITKLLSWNMKNLVALPSSIC 757

Query: 774 GLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            L+SL  +   GCSKL+++ E +G +++L V
Sbjct: 758 RLKSLVSLSVPGCSKLESLPEEIGDLDNLRV 788



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 4   MKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           MK    +++ G+ I E+PSSI +  T +  L     KNL +LP +I  LK L +L + GC
Sbjct: 711 MKPEIQIHMLGSGIRELPSSITQYQTHITKLLSWNMKNLVALPSSICRLKSLVSLSVPGC 770

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV--RLPSSIN 120
           SKL+  P+ +  +++L  L    T I   PSSI  L  L +L     K++V    P    
Sbjct: 771 SKLESLPEEIGDLDNLRVLDARDTLILRPPSSIVRLNKLIILMFGGFKDVVNFEFPPVAE 830

Query: 121 GLKSLKTLNLSGCCKLEN--VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           GL+SL+ L+L+ CC L +  +P+ +G + SL++LD+S         SI  +  LRSL   
Sbjct: 831 GLRSLEHLDLT-CCNLIDGGLPEDIGSLSSLKKLDLSRNNFEHLPPSIAQLGALRSLDLK 889

Query: 179 GC 180
            C
Sbjct: 890 DC 891



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 18/194 (9%)

Query: 622 SGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDI-------VQVLSDGTDIRELS 674
           +GC S  KK+ R  V          CSRL    ++ P+I       +Q+   G+ IREL 
Sbjct: 674 NGCKSL-KKFPRVNVESLKYLTVQGCSRL----EKIPEIHGRMKPEIQIHMLGSGIRELP 728

Query: 675 LAI-ELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE 733
            +I +    + +L     KNL  LP +I  LK L +L++ G SK    PE     D L  
Sbjct: 729 SSITQYQTHITKLLSWNMKNLVALPSSICRLKSLVSLSVPGCSKLESLPEEIGDLDNLRV 788

Query: 734 IHLEGTAIRGLPASIELLSGNIL---SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           +    T I   P+SI  L+  I+      KD  N +  P    GLRSL  +  + C+ + 
Sbjct: 789 LDARDTLILRPPSSIVRLNKLIILMFGGFKDVVNFE-FPPVAEGLRSLEHLDLTCCNLID 847

Query: 791 -NVTETLGKVESLE 803
             + E +G + SL+
Sbjct: 848 GGLPEDIGSLSSLK 861


>gi|332330343|gb|AEE43929.1| TIR-NBS-LRR resistance protein muRdr1E [Rosa multiflora]
          Length = 1143

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 170/533 (31%), Positives = 259/533 (48%), Gaps = 41/533 (7%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L   I  L  L++++LS    L++ P     + +L KL L+G T++ ++  SI LL
Sbjct: 617  NIDHLWNGIKYLVNLKSIDLSYSINLRRTPDFTG-IPNLEKLVLEGCTNLVKIHPSIALL 675

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L++     CK++  LPS +N ++ L+T ++SGC KL+ +P+  G+   L  L + GTA
Sbjct: 676  KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKKIPEFEGQTNRLSNLSLGGTA 734

Query: 159  IRRPTSSI-FLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPS 211
            + +  SSI  L ++L  L  SG    E P S     +L  +  G    KS  P+  +L  
Sbjct: 735  VEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLAP 794

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L     L  L L+DC L E  IP+DI +L SL+ L L  NNFV+LPASI  L  L    +
Sbjct: 795  LKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLRRLELGGNNFVSLPASIYLLSKLTNFNV 854

Query: 272  EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI-INCIDSLKLLRKNGLA 330
            ++CKRLQ LP++       R++ C+ L        LCR      +NC++ L ++     +
Sbjct: 855  DNCKRLQQLPELSAKDVLPRSDNCTYLQLFPDPPDLCRITTNFWLNCVNCLSMVGNQDAS 914

Query: 331  ---ISMLREYLELQAVSD-----------PGHKLSIVFPGSQIPKWFMYQNEGSSITVTR 376
                S+L+ ++E+ +  D           P   L +V PGS+IP+WF  Q+ G  +T   
Sbjct: 915  YFLYSVLKRWIEVLSRCDMMVHMQETHRRPLKSLELVIPGSEIPEWFNNQSVGDRVTEKL 974

Query: 377  PSYLYNVNKVVGFAICCVFQVPKHSTGT-YLFHSYPAH-ELECSMDGSGEG-HYIYFRGK 433
            PS   N +K +GFA+C +   P + +      H  P    + C  +  G G H +    K
Sbjct: 975  PSDECN-SKCIGFAVCALIVPPDNPSAVPEDPHIDPDTCRIWCRWNNYGIGLHGVGVSVK 1033

Query: 434  FGHVVSDHLWLLFL--PRHGHNWQFESNLIRLSFRSIS-DPTWKVKRCGFHPIYMHEVEE 490
                VSDHL LL L  P        E N +    R++  +   KVK+CG   +Y H+ EE
Sbjct: 1034 --QFVSDHLCLLVLLSPFRKPENCLEVNFVFEITRAVGYNVCMKVKKCGVRALYEHDTEE 1091

Query: 491  FDETTKQSTRFTSCNLNEVHHD-----FVGSNMEVAQASGSGSSQWKWLKPVE 538
                  QS + +S +L E   D      V +  E A  SGSG S  ++    E
Sbjct: 1092 LISKMNQS-KSSSISLYEEGMDEQEGVMVKAKQEAA-TSGSGGSDDEYYSAAE 1142



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL   T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG SK ++ P
Sbjct: 658 VLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKKIP 716

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           E     ++L  + L GTA+  LP+SIE LS +++
Sbjct: 717 EFEGQTNRLSNLSLGGTAVEKLPSSIEHLSESLV 750



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I  L  L +++LS     R  P+ T   + L ++ LEG T +  +  SI LL
Sbjct: 617 NIDHLWNGIKYLVNLKSIDLSYSINLRRTPDFTGIPN-LEKLVLEGCTNLVKIHPSIALL 675

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               + N ++CK++KSLPS +N +  L     SGCSKLK + E  G+   L
Sbjct: 676 KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKKIPEFEGQTNRL 725



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 30/140 (21%)

Query: 7   LSDLYLDGTSITEVPSSIE-----------------------------LLTGLELLTLKG 37
           LS+L L GT++ ++PSSIE                             +++   L   K 
Sbjct: 725 LSNLSLGGTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKS 784

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
              L  L   +    CLRTL+L+ C+  + + P  + S+  L +L L G +   +P+SI 
Sbjct: 785 PHPLIPLLAPLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLRRLELGGNNFVSLPASIY 844

Query: 97  LLPGLELLYLNECKNLVRLP 116
           LL  L    ++ CK L +LP
Sbjct: 845 LLSKLTNFNVDNCKRLQQLP 864


>gi|408537084|gb|AFU75195.1| nematode resistance-like protein, partial [Solanum berthaultii]
          Length = 307

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/288 (46%), Positives = 190/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T ++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L+N+PD LG +  LEZL  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 131 NLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSMSLLKNLKXLSLSGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCXISDGGILSNLGFLPSLEJLILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L DC RL+SLP++PP+++ + ANGC+SL+++
Sbjct: 243 NIPDASISRLTRLKCLKLHDCARLESLPELPPSIKKITANGCTSLMSI 290



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T +  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCS LKN+ +
Sbjct: 126 VSGCSNLKNLPD 137



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T ++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
            LK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L+ C  L           
Sbjct: 131 NLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSMSLLKNLKXLSLSGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
                   +++GL SL  L+LS C   +  +   LG + SLE L ++G      P +SI 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDCXISDGGILSNLGFLPSLEJLILNGNNFSNIPDASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  L+ L    C
Sbjct: 251 RLTRLKCLKLHDC 263



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 3/105 (2%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI 748
           LK L TL++SG S  +  P+       L Z+H   TAI+ +P+S+
Sbjct: 118 LKCLKTLDVSGCSNLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSM 162


>gi|163914237|dbj|BAF95888.1| N-like protein [Nicotiana tabacum]
          Length = 1165

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 198/397 (49%), Gaps = 43/397 (10%)

Query: 11   YLDGT---SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
            YLD T   ++ EV  S+     L  L L  CK+L   P    +++ L  L L  C  L+K
Sbjct: 657  YLDLTWCSNLEEVHHSLGCCRKLIRLDLYNCKSLMRFPCV--NVESLEYLGLEYCDSLEK 714

Query: 68   FPQIVASMEDLSKLYLDGTSIAEVPSS-IELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            FP+I   M+   ++++  + I E+PSS  +    +  L L+  +NLV LPSSI  LKSL 
Sbjct: 715  FPEIHRRMKPEIQIHMGDSGIRELPSSYFQYQTHITKLDLSGIRNLVALPSSICRLKSLV 774

Query: 127  TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
             LN+ GC KLE++P+ +G +++LEELD   T I RP SSI  +  L+ L FS        
Sbjct: 775  RLNVWGCPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIVRLNKLKILSFSSFGYDGV- 833

Query: 187  ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
               H   P         PVA       G+ SL  LDLS C L +  +P DI +L SLKEL
Sbjct: 834  ---HFEFP---------PVA------EGLHSLEHLDLSYCNLIDGGLPEDIGSLSSLKEL 875

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
             L+ NNF  LP SI+ L  L+ L+L DCKRL  LP++ P L  +  + C   +  F  L 
Sbjct: 876  CLDGNNFEHLPRSIAQLGALQILDLSDCKRLTQLPELHPGLNVLHVD-CHMALKFFRDLV 934

Query: 307  LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL-----------SIVFP 355
              R K   +   D+      +  +I  L  +   Q +S   H +           SIV P
Sbjct: 935  TKRKKLQRVGLDDA------HNDSIYNLFAHALFQNISSLRHDIFASDSLSESVFSIVHP 988

Query: 356  GSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAIC 392
              +IP WF +Q   SS++   P   Y  +K +GFA+C
Sbjct: 989  WKKIPSWFHHQGRDSSVSANLPKNWYIPDKFLGFAVC 1025



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 5/123 (4%)

Query: 683 LVQLTLNGCKNLERLP-RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
           L++L L  CK+L R P   + +L+YL       L KF   PEI       ++IH+  + I
Sbjct: 679 LIRLDLYNCKSLMRFPCVNVESLEYLGLEYCDSLEKF---PEIHRRMKPEIQIHMGDSGI 735

Query: 742 RGLPASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           R LP+S      +I   +L   +NL +LPS+I  L+SL  +   GC KL+++ E +G ++
Sbjct: 736 RELPSSYFQYQTHITKLDLSGIRNLVALPSSICRLKSLVRLNVWGCPKLESLPEEIGDLD 795

Query: 801 SLE 803
           +LE
Sbjct: 796 NLE 798



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 14/162 (8%)

Query: 655 DEFPDI-------VQVLSDGTDIREL-SLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           ++FP+I       +Q+    + IREL S   +    + +L L+G +NL  LP +I  LK 
Sbjct: 713 EKFPEIHRRMKPEIQIHMGDSGIRELPSSYFQYQTHITKLDLSGIRNLVALPSSICRLKS 772

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG-NILSNLK---DC 762
           L  LN+ G  K    PE     D L E+  + T I   P+SI  L+   ILS      D 
Sbjct: 773 LVRLNVWGCPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIVRLNKLKILSFSSFGYDG 832

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLK-NVTETLGKVESLE 803
            + +  P    GL SL  +  S C+ +   + E +G + SL+
Sbjct: 833 VHFE-FPPVAEGLHSLEHLDLSYCNLIDGGLPEDIGSLSSLK 873



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 114/283 (40%), Gaps = 45/283 (15%)

Query: 1   MASMKDLSDLYLD-------GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKC 53
           M +MK L  LY+D       G+ IT   S   L   L    L G     SLP T    K 
Sbjct: 551 MKNMKRLRILYIDNWTWSSDGSYITHDGSIEYLSNNLRWFVLPGYPR-ESLPSTFEP-KM 608

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           L  L+LSG S              L  L+++             LP L  + L+  K L+
Sbjct: 609 LVHLKLSGNS--------------LRYLWMETKH----------LPSLRRIDLSRSKRLM 644

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKN 171
           R P    G+ +L+ L+L+ C  LE V  +LG    L  LD+    + +R P  ++   ++
Sbjct: 645 RTPD-FTGMPNLEYLDLTWCSNLEEVHHSLGCCRKLIRLDLYNCKSLMRFPCVNV---ES 700

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS--LTGVCSLTKLDLSDCGLG 229
           L  L    C+        H  +   +           LPS        +TKLDLS  G+ 
Sbjct: 701 LEYLGLEYCDSLEKFPEIHRRMKPEIQIHMGDSGIRELPSSYFQYQTHITKLDLS--GIR 758

Query: 230 E-AAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELE 270
              A+PS I  L SL  L +       +LP  I  L NLEEL+
Sbjct: 759 NLVALPSSICRLKSLVRLNVWGCPKLESLPEEIGDLDNLEELD 801



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S+  L +L LDG +   +P SI  L  L++L L  CK L+ LP     L  L      
Sbjct: 866 IGSLSSLKELCLDGNNFEHLPRSIAQLGALQILDLSDCKRLTQLPELHPGLNVLHV---- 921

Query: 61  GCS-KLKKFPQIVASMEDLSKLYLD 84
            C   LK F  +V   + L ++ LD
Sbjct: 922 DCHMALKFFRDLVTKRKKLQRVGLD 946


>gi|359489175|ref|XP_002264704.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1254

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 178/593 (30%), Positives = 267/593 (45%), Gaps = 83/593 (13%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKN------------------- 40
            +  +K L+ L L D   +   PSSIEL   LE+L + GC N                   
Sbjct: 688  LGVLKKLTSLQLKDCQKLESFPSSIEL-ESLEVLDISGCSNFEKFPEIHGNMRHLRKIYL 746

Query: 41   ----LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
                +  LP +I  L+ L  L+L+ CS  +KFP+I   M+ L  L L GT+I E+PSSI 
Sbjct: 747  NQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIY 806

Query: 97   LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             L GL  L L  CKNL RLPSSI  L+ L  + L GC  LE  PD +  +E++  L++ G
Sbjct: 807  HLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMG 866

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNE---PPASASWHLHLPFNLLGKSS-------CPVA 206
            T+++    SI  +K L  L  + C      P+S      L   +L   S        P+ 
Sbjct: 867  TSLKELPPSIEHLKGLEELDLTNCENLVTLPSSICNIRSLERLVLQNCSKLQELPKNPMT 926

Query: 207  LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            L    + G+CSL  L+LS C L   AIPSD+  L SL+ L L+ +N   +P+ IS    L
Sbjct: 927  LQCSDMIGLCSLMDLNLSGCNLMGGAIPSDLWCLSSLRRLNLSGSNIRCIPSGIS---QL 983

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
              L+L  CK L+S+ ++P +L+ + A+ C+ L TL         + ++ +C  S      
Sbjct: 984  RILQLNHCKMLESITELPSSLRVLDAHDCTRLDTLSSLSS--LLQCSLFSCFKS------ 1035

Query: 327  NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
               AI  L   +E    S     ++IV PGS+ IP+W   Q  GS +TV  P      N 
Sbjct: 1036 ---AIQELEHGIE----SSKSIGINIVIPGSRGIPEWISNQELGSEVTVELPMNWCEDND 1088

Query: 386  VVGFAICCVFQVPKHST--------GTYLFHSYPAHELE-------CSMDGSGEGHYIYF 430
             +GFA+C ++ VP                FH      ++       C    +G   Y++ 
Sbjct: 1089 FLGFALCSLY-VPLDDAFEDGGLECRLIAFHGDQFRRVDDIWFKSSCKYYENGGVSYLHK 1147

Query: 431  RGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSI-------SDPTWKVKRCGFHPI 483
                G V    LW+ + P+     +  SN  R  F+++           +KVK+CG H I
Sbjct: 1148 CCDNGDVSDCVLWVTYYPQIAIKKKHRSNQWR-HFKALFNGLYNCGSKAFKVKKCGVHLI 1206

Query: 484  YMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSSQWKWLKP 536
            Y  + +    +++      +CN+     D      E   A G    + + L+P
Sbjct: 1207 YAQDFQPNHYSSQLLRETANCNVKRSRDD-----TESDPAEGPSHKRLRDLEP 1254



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 11/155 (7%)

Query: 645 GNCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
            NCS      ++FP+I + +         GT I+EL  +I  L GL +L+L  CKNL RL
Sbjct: 770 ANCSNF----EKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRL 825

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P +I  L++L  + L G S    FP+I    + +  + L GT+++ LP SIE L G    
Sbjct: 826 PSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEEL 885

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           +L +C+NL +LPS+I  +RSL  +    CSKL+ +
Sbjct: 886 DLTNCENLVTLPSSICNIRSLERLVLQNCSKLQEL 920



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 135/289 (46%), Gaps = 38/289 (13%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  LY +G S+  +PS+               +NL  L +  S++K L      G   L
Sbjct: 601 ELRYLYWEGYSLNCLPSNFH------------GENLVELELRYSTIKRL----WKGSKGL 644

Query: 66  KKFPQI-VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +K   I ++  E L+K+           S    +P LE L L  C +L ++ SS+  LK 
Sbjct: 645 EKLKFINLSHSEKLTKI-----------SKFSGMPNLERLNLEGCTSLRKVHSSLGVLKK 693

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLYF--SGCN 181
           L +L L  C KLE+ P ++ ++ESLE LD+SG +       I   M++LR +Y   SG  
Sbjct: 694 LTSLQLKDCQKLESFPSSI-ELESLEVLDISGCSNFEKFPEIHGNMRHLRKIYLNQSGIK 752

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           E P S  +   L   +L  ++C      P +   + SL  L L    + E  +PS I +L
Sbjct: 753 ELPTSIEFLESL--EMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKE--LPSSIYHL 808

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
             L+EL L R  N   LP+SI  L  L  + L  C  L++ P I  +++
Sbjct: 809 TGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDME 857



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 62/109 (56%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L L+  S F +FPEI      L  + L GTAI+ LP+SI  L+G
Sbjct: 751 IKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTG 810

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               +L  CKNL+ LPS+I  L  L  +Y  GCS L+   + +  +E++
Sbjct: 811 LRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENI 859



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 1/120 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +R++  ++ +L  L  L L  C+ LE  P +I  L+ L  L++SG S F +FPEI  +
Sbjct: 679 TSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSIE-LESLEVLDISGCSNFEKFPEIHGN 737

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L +I+L  + I+ LP SIE L    +  L +C N +  P     ++SL  +   G +
Sbjct: 738 MRHLRKIYLNQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTA 797


>gi|408537060|gb|AFU75183.1| nematode resistance-like protein, partial [Solanum bulbocastanum]
          Length = 307

 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 132/288 (45%), Positives = 188/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+   IE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFXIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK L TL++SGC 
Sbjct: 71  MNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLXTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELXCTHTAIQXIPSSMSLLKNLKHLSLSGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPAASISRLTRLKRLKLLGCGRLESLPELPPSIKGIYANECTSLMSI 290



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++  IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFXIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L  + 
Sbjct: 66  EIEEKMNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLXTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 24/197 (12%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL TL++SGCS
Sbjct: 71  MNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLXTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L    T+I  +PSS+ LL  L+ L L+ C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEELXCTHTAIQXIPSSMSLLKNLKHLSLSGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SLE L ++G      P 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDC----NISDGGILSNLGFLPSLEILILNGNNFSNIPA 246

Query: 164 SSIFLMKNLRSLYFSGC 180
           +SI  +  L+ L   GC
Sbjct: 247 ASISRLTRLKRLKLLGC 263



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 26/186 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++         T + EL  ++E L G+  + L+ CK+LE LP 
Sbjct: 58  CSKLRT----FPEIEEKMNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPS 113

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL++SG SK +  P+       L E+    TAI+ +P+S+ LL      +L
Sbjct: 114 SIFRLKCLXTLDVSGCSKLKNLPDDLGLLVGLEELXCTHTAIQXIPSSMSLLKNLKHLSL 173

Query: 760 KDCKNL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEV 804
             C  L           KS+      ++GL SL M+  S C+     +   LG + SLE+
Sbjct: 174 SGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEI 233

Query: 805 RLSSWN 810
            + + N
Sbjct: 234 LILNGN 239



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 80/181 (44%), Gaps = 4/181 (2%)

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L L EC +LV +   I  L  L  LNL  C  L+ +P  + ++E LE L ++G +
Sbjct: 1   PNLERLVLEECTSLVEINFXIENLGKLVLLNLKNCRNLKTLPKRI-RLEKLEILVLTGCS 59

Query: 159 IRRPTSSI-FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
             R    I   M  L  LY    +     AS        ++  S C     LP S+  + 
Sbjct: 60  KLRTFPEIEEKMNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLK 119

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  LD+S C      +P D+  L  L+EL         +P+S+S L NL+ L L  C  
Sbjct: 120 CLXTLDVSGCS-KLKNLPDDLGLLVGLEELXCTHTAIQXIPSSMSLLKNLKHLSLSGCNA 178

Query: 277 L 277
           L
Sbjct: 179 L 179


>gi|147767848|emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]
          Length = 2019

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 203/375 (54%), Gaps = 23/375 (6%)

Query: 30   LELLTLKG-CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSI 88
            LE+LTL+G C NL SLP +I  L+CL+TL  SGC  L  FP+I+ +ME+L +LYLD T+I
Sbjct: 648  LEILTLEGWCVNLESLPRSIYKLRCLKTLCCSGCVSLSSFPEIMGNMENLRELYLDDTAI 707

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             ++PSSI+ L GLE L L +C +L  +P SI  L SLK L+ S C KLE +P+ L  ++ 
Sbjct: 708  VKLPSSIKHLKGLEYLTLVKCDDLKTVPQSICNLTSLKLLDFSSCSKLEKLPEDLKSLKC 767

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA---SASWHLHLPFNLLGKSSCPV 205
            LE L +     + P+ S     +LR LY    N       S +    L    L +++   
Sbjct: 768  LETLSLHAVNCQLPSLSGLC--SLRKLYLGRSNLTQGVIQSNNLLNSLKVLDLSRNNVID 825

Query: 206  ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
              +L  +  + SL +L+L +C L +  IPS++  L SL+ L L+ N+F ++PASIS L  
Sbjct: 826  KGILIRICHLSSLEELNLKNCNLMDGEIPSEVCQLSSLEILDLSWNHFNSIPASISQLSK 885

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRA-NGCSSLVTLFGALKLCRSKYTIINCIDSLKLL 324
            L+ L L  CK LQ +P++P  L+ + A N   +L +    L    SK+    C  S ++ 
Sbjct: 886  LKALGLSHCKMLQQIPELPSTLRLLDAHNSHCALSSPSSFLSSSFSKFQDFECSSSSQV- 944

Query: 325  RKNGLAISMLREYLELQAVSDPGHKLSIVFPG-SQIPKWFMYQNEGSSITVTRPSYLYNV 383
                        YL   +    G  + IV PG S IP+W M QN G+ +T+  P   Y  
Sbjct: 945  ------------YL-CDSPYYFGEGVCIVIPGISGIPEWIMDQNMGNHVTIDLPQDWYAD 991

Query: 384  NKVVGFAICCVFQVP 398
               +GFA+C  + VP
Sbjct: 992  KDFLGFALCSAY-VP 1005



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 686 LTLNG-CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
           LTL G C NLE LPR+I  L+ L TL  SG      FPEI  + + L E++L+ TAI  L
Sbjct: 651 LTLEGWCVNLESLPRSIYKLRCLKTLCCSGCVSLSSFPEIMGNMENLRELYLDDTAIVKL 710

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P+SI+ L G     L  C +LK++P +I  L SL+++  S CSKL+ + E L  ++ LE 
Sbjct: 711 PSSIKHLKGLEYLTLVKCDDLKTVPQSICNLTSLKLLDFSSCSKLEKLPEDLKSLKCLET 770


>gi|408537070|gb|AFU75188.1| nematode resistance-like protein, partial [Solanum demissum]
          Length = 307

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/288 (46%), Positives = 187/288 (64%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L LSGCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G  ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGXGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LE L  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEXLHCTHTAIQXIPSSMSLLKNLKXLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCXISDGGILSNLGFLPSLEJLILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPDASISRLTRLKXLKLHXCXRLESLPELPPSIKXIXANXCTSLMSI 290



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLSGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATSLSELPASVENLSGXGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G  ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATSLSELPASVENLSGXGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L  L+   T+I  +PSS+ LL  L+ L L  C  L           
Sbjct: 131 KLKNLPDDLGLLVGLEXLHCTHTAIQXIPSSMSLLKNLKXLSLRGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
                   +++GL SL  L+LS C   +  +   LG + SLE L ++G      P +SI 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDCXISDGGILSNLGFLPSLEJLILNGNNFSNIPDASIS 250

Query: 168 LMKNLRSLYFSGC 180
            +  L+ L    C
Sbjct: 251 RLTRLKXLKLHXC 263



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 24/209 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G   + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATSLSELPASVENLSGXGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L  +H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLGLLVGLEXLHCTHTAIQXIPSSMSLLKNLKXLSLRGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C      +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCXISDGGILSNLGFLPSLEJLILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
                  N+F  +  +++  +T+L   +L
Sbjct: 238 G------NNFSNIPDASISRLTRLKXLKL 260


>gi|46577339|sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N
 gi|558887|gb|AAA50763.1| N [Nicotiana glutinosa]
          Length = 1144

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/384 (34%), Positives = 199/384 (51%), Gaps = 29/384 (7%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +++ EV  S+   + +  L L  CK+L   P    +++ L  L L  C  L+K P+I   
Sbjct: 653  SNLEEVHHSLGCCSKVIGLYLNDCKSLKRFPCV--NVESLEYLGLRSCDSLEKLPEIYGR 710

Query: 75   MEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            M+   ++++ G+ I E+PSSI +    +  L L   KNLV LPSSI  LKSL +L++SGC
Sbjct: 711  MKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGC 770

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             KLE++P+ +G +++L   D S T I RP SSI  +  L  L F G  +       H   
Sbjct: 771  SKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKD-----GVHFEF 825

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
            P         PVA       G+ SL  L+LS C L +  +P +I +L SLK+L L+RNNF
Sbjct: 826  P---------PVA------EGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLSRNNF 870

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
              LP+SI+ L  L+ L+L+DC+RL  LP++PP L  +  + C   +     L   R K  
Sbjct: 871  EHLPSSIAQLGALQSLDLKDCQRLTQLPELPPELNELHVD-CHMALKFIHYLVTKRKKLH 929

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI-VFPGS----QIPKWFMYQNE 368
             +   D+      N  A +M +    ++        LS+ VF G     +IP WF +Q  
Sbjct: 930  RVKLDDAHNDTMYNLFAYTMFQNISSMRHDISASDSLSLTVFTGQPYPEKIPSWFHHQGW 989

Query: 369  GSSITVTRPSYLYNVNKVVGFAIC 392
             SS++V  P   Y  +K +GFA+C
Sbjct: 990  DSSVSVNLPENWYIPDKFLGFAVC 1013



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 96/181 (53%), Gaps = 4/181 (2%)

Query: 4   MKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           MK    +++ G+ I E+PSSI +  T +  L L   KNL +LP +I  LK L +L +SGC
Sbjct: 711 MKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGC 770

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--LPSSIN 120
           SKL+  P+ +  +++L       T I   PSSI  L  L +L     K+ V    P    
Sbjct: 771 SKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFEFPPVAE 830

Query: 121 GLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           GL SL+ LNLS C  ++  +P+ +G + SL++LD+S        SSI  +  L+SL    
Sbjct: 831 GLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLSRNNFEHLPSSIAQLGALQSLDLKD 890

Query: 180 C 180
           C
Sbjct: 891 C 891



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 5/124 (4%)

Query: 683 LVQLTLNGCKNLERLP-RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
           ++ L LN CK+L+R P   + +L+YL   +   L K    PEI       ++IH++G+ I
Sbjct: 668 VIGLYLNDCKSLKRFPCVNVESLEYLGLRSCDSLEKL---PEIYGRMKPEIQIHMQGSGI 724

Query: 742 RGLPASIELLSGNILSNL-KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           R LP+SI     ++   L  + KNL +LPS+I  L+SL  +  SGCSKL+++ E +G ++
Sbjct: 725 RELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLD 784

Query: 801 SLEV 804
           +L V
Sbjct: 785 NLRV 788



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 6/148 (4%)

Query: 661 VQVLSDGTDIRELSLAI-ELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR 719
           +Q+   G+ IREL  +I +    + +L L   KNL  LP +I  LK L +L++SG SK  
Sbjct: 715 IQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLE 774

Query: 720 EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL---SNLKDCKNLKSLPSTINGLR 776
             PE     D L       T I   P+SI  L+  I+      KD  + +  P    GL 
Sbjct: 775 SLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFE-FPPVAEGLH 833

Query: 777 SLRMMYPSGCSKLK-NVTETLGKVESLE 803
           SL  +  S C+ +   + E +G + SL+
Sbjct: 834 SLEYLNLSYCNLIDGGLPEEIGSLSSLK 861


>gi|408537090|gb|AFU75198.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/288 (44%), Positives = 184/288 (63%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  LPSSI  +K LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRVKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KN + L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P AS S L  L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASKSRLTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK + FP
Sbjct: 7   VLEECTSLVEINFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+SLPS+I  ++ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRVKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L SLP +I  +KCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRVKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL   + L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +S  
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASKS 250

Query: 168 LMKNLRSLYFSGC 180
            +  LR+L  +GC
Sbjct: 251 RLTQLRALALAGC 263



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 3/122 (2%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    E  ++   + ++    T + ELS ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLKTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           +K L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L+ C 
Sbjct: 118 VKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSLRGCN 177

Query: 764 NL 765
            L
Sbjct: 178 AL 179


>gi|225460105|ref|XP_002275120.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1915

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 170/517 (32%), Positives = 251/517 (48%), Gaps = 62/517 (11%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G++I E+P  IE    L  L L+ CKNL SLP TI  LK L TL  SGCS+L  FP
Sbjct: 1320 LCLKGSAINELPF-IESPFELGSLCLRECKNLESLPSTICELKSLTTLSCSGCSQLTIFP 1378

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I  ++E+L +L+L+GT+I E+PSSI+ L GL+ L L  C NLV LP +I  LKSL  L+
Sbjct: 1379 EIFETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLS 1438

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC----NEPPA 185
             +GC +L++ P+ L  +E+L EL + GTAI+   +SI  +  L+ L+ S C    N P +
Sbjct: 1439 CTGCSQLKSFPEILENIENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPES 1498

Query: 186  SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL-----SDCGLGEAAIPSDIDNL 240
              +       N+   + C      P   G  SL +L+L     SD      AI SD   +
Sbjct: 1499 ICNLRFLKNLNV---NLCSKLEKFPQNLG--SLQRLELLGAAGSDSNRVLGAIQSDDCRM 1553

Query: 241  HSLKELYLNRNNFVTLPASISGLLN-LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
             S K L L+ N F ++       L+ L  L+L  C++L  +P++PP+L+ +  + C  L 
Sbjct: 1554 SSWKALNLSINYFSSIIPISIIQLSKLRVLDLSHCQKLLQIPELPPSLRILDVHACPCLE 1613

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ- 358
            TL     L    +++  C  S         AI       E +  S    ++ IV PG+  
Sbjct: 1614 TLSSPSSLL--GFSLFRCFKS---------AIE------EFECGSYWSKEIQIVIPGNNG 1656

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGT---------YLFHS 409
            IP+W   + +GS IT+  P   Y+ N  +G A+  V+ VP H               FH 
Sbjct: 1657 IPEWISQRKKGSEITIELPMDWYHNNDFLGVALYSVY-VPLHIESNEDPCSLKCQLNFHV 1715

Query: 410  YPAHELE------CSMDGSGEGHY-----IYFRGKFGHVVSDHL---WLLFLPRHGHNWQ 455
            +    L+       SM+G     +      + RG   H   D L    + + P+     Q
Sbjct: 1716 HHFEFLDDLPSKFWSMNGLSYEFWPVDELSFRRGYLCHHNGDELNEVRVAYYPKVAIPNQ 1775

Query: 456  FESNL---IRLSFRS-ISDPTWKVKRCGFHPIYMHEV 488
            + SN    ++ SF   +     KVK CGFH I M ++
Sbjct: 1776 YWSNKWRHLKASFHGYLGSKQVKVKECGFHLISMPKI 1812



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/166 (47%), Positives = 112/166 (67%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
              ++++L +L+L+GT+I E+PSSI+ L GL+ L L  C NL SLP TI  LK L  L  +
Sbjct: 1381 FETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCT 1440

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            GCS+LK FP+I+ ++E+L +L L GT+I E+P+SIE L GL+ L+L+ C NLV LP SI 
Sbjct: 1441 GCSQLKSFPEILENIENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPESIC 1500

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
             L+ LK LN++ C KLE  P  LG ++ LE L  +G+   R   +I
Sbjct: 1501 NLRFLKNLNVNLCSKLEKFPQNLGSLQRLELLGAAGSDSNRVLGAI 1546



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 171/586 (29%), Positives = 251/586 (42%), Gaps = 121/586 (20%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            +M +L  L L  T+I E+ SS+  L  L+ L L  CKNL +LP +I ++  L TL  S C
Sbjct: 737  NMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVNLPESIFNISSLETLNGSMC 796

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             K+K FP+I  +M +L +L L  T+I E+P SI  L  L+ L L+ C NLV LP SI  L
Sbjct: 797  LKIKDFPEIKNNMGNLERLDLSFTAIEELPYSIGYLKALKDLDLSYCHNLVNLPESICNL 856

Query: 123  KS-------------------------LKTLNLSGCCKLENVPDTLGKVESLEEL----- 152
             S                         L++LN + C   + V  + G+  SLE L     
Sbjct: 857  SSLEKLRVRNCPKLQRLEVNLEDGSHILRSLNTTCCIIKQGVIWSNGRFSSLETLHLRCS 916

Query: 153  -------------------------DVSGTAIRR----PTSSIFLMKNLRSLYFSG---- 179
                                     D++G  I      P+S + L     +L   G    
Sbjct: 917  QMEGEILNHHIWSLSSLVELCIRNSDLTGRGILSDSFYPSSLVGLSVGNFNLMEVGDKGE 976

Query: 180  CNEPPASAS--------WHLHLPFNL-LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
             N+ P S          W+L     L L   +     +L  +  + SL KL L++C L E
Sbjct: 977  SNDSPLSVGIQGILNDIWNLSSLVKLSLNNCNLMEVGILSDIWNLSSLVKLSLNNCNLKE 1036

Query: 231  AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
              I + I +L SL+EL L+ N+F ++PA I  L NL  L L  CK+LQ +P++P +L+ +
Sbjct: 1037 GEILNRICHLPSLEELSLDGNHFSSIPAGIRLLSNLRALNLRHCKKLQEIPELPSSLRDL 1096

Query: 291  RANGCSSLVTL---------------FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR 335
              + C  L  +                G   L  S ++++NC+ S KL ++  L IS   
Sbjct: 1097 YLSHCKKLRAIPELPSNLLLLDMHSSDGISSL--SNHSLLNCLKS-KLYQE--LQIS--- 1148

Query: 336  EYLELQAVSDPGHKLSIVFP-GSQIPKWFMYQNEGS-SITVTRPSYLYNVNKVVGFAICC 393
                L A       + IV P  S I +    Q+ GS  + +  P   Y  N ++GFA+CC
Sbjct: 1149 ----LGASEFRDMAMEIVIPRSSGILEGTRNQSMGSHQVRIELPQNWYENNDLLGFALCC 1204

Query: 394  VF-QVPKHSTGTYLFHSYPAHELECSMDGSG--------------EGHYIYFRGKFGHVV 438
            V+  VP      +     P   L+C +  SG              E H        G   
Sbjct: 1205 VYVWVPDE----FNPRCEPLSCLDCKLAISGNCQSKDVDKFQIESECHCSDDDDDHGS-A 1259

Query: 439  SDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIY 484
            SD +W+++ P+     Q+ SN       S    T + K CG HPIY
Sbjct: 1260 SDLVWVIYYPKDAIKKQYLSNQWTHFTASFKSVTLEAKECGIHPIY 1305



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 113/179 (63%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +M  L ++ L GT+I EVPSSIE L GLE   L GC NL SLP +I +L  L+TL L  C
Sbjct: 666 NMSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSLQTLYLDSC 725

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           SKLK FP++  +M +L +L L  T+I E+ SS+  L  L+ L L+ CKNLV LP SI  +
Sbjct: 726 SKLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVNLPESIFNI 785

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            SL+TLN S C K+++ P+    + +LE LD+S TAI     SI  +K L+ L  S C+
Sbjct: 786 SSLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTAIEELPYSIGYLKALKDLDLSYCH 844



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 154/286 (53%), Gaps = 20/286 (6%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L +L L  + I ++    E+   L+++ L   K L  +P   SS+  L  L L GC+ 
Sbjct: 598 RNLVELDLVRSGIKKLWKGDEIFNSLKVINLGYSKYLVEIP-DFSSVPNLEILNLEGCTS 656

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+ FP+I  +M  L ++ L GT+I EVPSSIE L GLE   L+ C NLV LP SI  L S
Sbjct: 657 LESFPKIKENMSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSS 716

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L+TL L  C KL+  P+    + +LE L++  TAI   +SS+  +K L+ L  S C    
Sbjct: 717 LQTLYLDSCSKLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNL- 775

Query: 185 ASASWHLHLP---FNL-----LGKSSCPVALMLPSL-TGVCSLTKLDLSDCGLGEAAIPS 235
                 ++LP   FN+     L  S C      P +   + +L +LDLS   + E  +P 
Sbjct: 776 ------VNLPESIFNISSLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTAIEE--LPY 827

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSL 280
            I  L +LK+L L+  +N V LP SI  L +LE+L + +C +LQ L
Sbjct: 828 SIGYLKALKDLDLSYCHNLVNLPESICNLSSLEKLRVRNCPKLQRL 873



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 84/136 (61%), Gaps = 1/136 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+ I EL   IE  F L  L L  CKNLE LP TI  LK L+TL+ SG S+   FPEI  
Sbjct: 1324 GSAINELPF-IESPFELGSLCLRECKNLESLPSTICELKSLTTLSCSGCSQLTIFPEIFE 1382

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            + + L E+HLEGTAI  LP+SI+ L G    NL  C NL SLP TI  L+SL  +  +GC
Sbjct: 1383 TLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVFLSCTGC 1442

Query: 787  SKLKNVTETLGKVESL 802
            S+LK+  E L  +E+L
Sbjct: 1443 SQLKSFPEILENIENL 1458



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 89/155 (57%), Gaps = 7/155 (4%)

Query: 657  FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            FP+I + L        +GT I EL  +I+ L GL  L L  C NL  LP TI  LK L  
Sbjct: 1377 FPEIFETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNLVSLPETIYRLKSLVF 1436

Query: 710  LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            L+ +G S+ + FPEI  + + L E+ L GTAI+ LP SIE L G    +L +C NL +LP
Sbjct: 1437 LSCTGCSQLKSFPEILENIENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLP 1496

Query: 770  STINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             +I  LR L+ +  + CSKL+   + LG ++ LE+
Sbjct: 1497 ESICNLRFLKNLNVNLCSKLEKFPQNLGSLQRLEL 1531



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 10/164 (6%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FP I + +S        GT I E+  +IE L GL    L+GC NL  LPR+I  L  L
Sbjct: 658 ESFPKIKENMSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSL 717

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            TL L   SK + FPE+  +   L  ++L  TAI  L +S+  L      +L  CKNL +
Sbjct: 718 QTLYLDSCSKLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVN 777

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTE---TLGKVESLEVRLSS 808
           LP +I  + SL  +  S C K+K+  E    +G +E L++  ++
Sbjct: 778 LPESIFNISSLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTA 821



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 4/142 (2%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           I++L    E+   L  + L   K L  +P   S++  L  LNL G +    FP+I  +  
Sbjct: 610 IKKLWKGDEIFNSLKVINLGYSKYLVEIP-DFSSVPNLEILNLEGCTSLESFPKIKENMS 668

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           +L EI+L GTAI  +P+SIE L+G    NL  C NL SLP +I  L SL+ +Y   CSKL
Sbjct: 669 KLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSLQTLYLDSCSKL 728

Query: 790 KNVTE---TLGKVESLEVRLSS 808
           K   E    +G +E L +R ++
Sbjct: 729 KGFPEMKDNMGNLERLNLRFTA 750



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 4/145 (2%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + ++++L +L L GT+I E+P+SIE L GL+ L L  C NL +LP +I +L+ L+ L ++
Sbjct: 1452 LENIENLRELSLHGTAIKELPTSIERLGGLQDLHLSNCSNLVNLPESICNLRFLKNLNVN 1511

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE----LLPGLELLYLNECKNLVRLP 116
             CSKL+KFPQ + S++ L  L   G+    V  +I+     +   + L L+       +P
Sbjct: 1512 LCSKLEKFPQNLGSLQRLELLGAAGSDSNRVLGAIQSDDCRMSSWKALNLSINYFSSIIP 1571

Query: 117  SSINGLKSLKTLNLSGCCKLENVPD 141
             SI  L  L+ L+LS C KL  +P+
Sbjct: 1572 ISIIQLSKLRVLDLSHCQKLLQIPE 1596



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 66/129 (51%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I ELS ++  L  L  L L+ CKNL  LP +I  +  L TLN S   K ++FPEI ++
Sbjct: 749 TAIEELSSSVGHLKALKHLDLSFCKNLVNLPESIFNISSLETLNGSMCLKIKDFPEIKNN 808

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L  + L  TAI  LP SI  L      +L  C NL +LP +I  L SL  +    C 
Sbjct: 809 MGNLERLDLSFTAIEELPYSIGYLKALKDLDLSYCHNLVNLPESICNLSSLEKLRVRNCP 868

Query: 788 KLKNVTETL 796
           KL+ +   L
Sbjct: 869 KLQRLEVNL 877



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 36/251 (14%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           LR L   GCS L+  P       +L +L L  + I ++    E+   L+++ L   K LV
Sbjct: 578 LRYLNFYGCS-LESLPTNFNG-RNLVELDLVRSGIKKLWKGDEIFNSLKVINLGYSKYLV 635

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            +P   + + +L+ LNL GC  LE+ P     +  L E+++SGTAI    SSI  +  L 
Sbjct: 636 EIPD-FSSVPNLEILNLEGCTSLESFPKIKENMSKLREINLSGTAIIEVPSSIEHLNGLE 694

Query: 174 SLYFSGCNEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCS-------------- 217
               SGC              FNL  L +S C ++ +       CS              
Sbjct: 695 YFNLSGC--------------FNLVSLPRSICNLSSLQTLYLDSCSKLKGFPEMKDNMGN 740

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKR 276
           L +L+L    + E  + S + +L +LK L L+   N V LP SI  + +LE L    C +
Sbjct: 741 LERLNLRFTAIEE--LSSSVGHLKALKHLDLSFCKNLVNLPESIFNISSLETLNGSMCLK 798

Query: 277 LQSLPQIPPNL 287
           ++  P+I  N+
Sbjct: 799 IKDFPEIKNNM 809



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 31/218 (14%)

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
           Y N  K     PSS      L+ LN  GC  LE++P       +L ELD+  + I++   
Sbjct: 563 YWNCFKGDFEFPSS-----QLRYLNFYGC-SLESLPTNFNG-RNLVELDLVRSGIKKLWK 615

Query: 165 SIFLMKNLRSL---YFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLT-GVCSLT 219
              +  +L+ +   Y     E P  +S    +P   +L    C      P +   +  L 
Sbjct: 616 GDEIFNSLKVINLGYSKYLVEIPDFSS----VPNLEILNLEGCTSLESFPKIKENMSKLR 671

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN---NFVTLPASISGLLNLEELELEDCKR 276
           +++LS   + E  +PS I++L+ L+  Y N +   N V+LP SI  L +L+ L L+ C +
Sbjct: 672 EINLSGTAIIE--VPSSIEHLNGLE--YFNLSGCFNLVSLPRSICNLSSLQTLYLDSCSK 727

Query: 277 LQSLPQIPP--------NLQFVRANGCSSLVTLFGALK 306
           L+  P++          NL+F      SS V    ALK
Sbjct: 728 LKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKALK 765



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 680  LFGLVQLTLNGCKNLE-RLPRTISALKYLSTLNLSGLS-KFREFPEITSSRDQLLEIHLE 737
            L  LV+L+LN C  +E  +   I  L  L  L+L+  + K  E          L E+ L+
Sbjct: 996  LSSLVKLSLNNCNLMEVGILSDIWNLSSLVKLSLNNCNLKEGEILNRICHLPSLEELSLD 1055

Query: 738  GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            G     +PA I LLS     NL+ CK L+ +P   + LR L   Y S C KL+ + E
Sbjct: 1056 GNHFSSIPAGIRLLSNLRALNLRHCKKLQEIPELPSSLRDL---YLSHCKKLRAIPE 1109


>gi|147802252|emb|CAN68265.1| hypothetical protein VITISV_020931 [Vitis vinifera]
          Length = 1441

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/428 (33%), Positives = 214/428 (50%), Gaps = 48/428 (11%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             A+M+ L  LYL  + I E+PS+I  L  L+ L+L     +  LP +I SL+ L+TL L 
Sbjct: 872  FANMEHLRKLYLSNSGIKELPSNIGNLKHLKELSLDKT-FIKELPKSIWSLEALQTLSLR 930

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            GCS  +KFP+I  +M  L  L ++ T+I E+P SI  L  L  L L  CKNL  LPSSI 
Sbjct: 931  GCSNFEKFPEIQRNMGSLLDLEIEETAITELPLSIGHLTRLNSLNLENCKNLRSLPSSIC 990

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             LKSLK L+L+ C  LE  P+ L  +E L  L++ GTAI    SSI  +++L+ L    C
Sbjct: 991  RLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLELRGTAITGLPSSIEHLRSLQWLKLINC 1050

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV-----------CSLTKLDLSDCGLG 229
                A       LP N +G  +C   L++ + + +           C LT LDL  C L 
Sbjct: 1051 YNLEA-------LP-NSIGNLTCLTTLVVRNCSKLHNLPDNLRSLQCCLTTLDLGGCNLM 1102

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
            E  IP DI  L SL+ L ++ N+   +P  I  LL L  L +  C  L+ +P +P +L+ 
Sbjct: 1103 EGGIPRDIWGLSSLEFLDVSENHIRCIPIGIIQLLKLTTLRMNHCLMLEDIPDLPSSLRR 1162

Query: 290  VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR-----KNGLAISMLREYLELQAVS 344
            + A+GC  L TL   + +  S  +++NC  SL         +N    S  ++ ++L   +
Sbjct: 1163 IEAHGCRCLETLSSPIHVLWS--SLLNCFKSLIQAHDSHDVQNEEEDSHKQQDIDLALPT 1220

Query: 345  DPGH--------------------KLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNV 383
              G+                    ++ +  PGS  IP+W  +QN+G  + +  P   Y  
Sbjct: 1221 SSGNLDEEEDLYGGNSDEEDGPLGQIDVFIPGSSGIPEWVSHQNKGCEVRIELPMNWYED 1280

Query: 384  NKVVGFAI 391
            N  +GFA+
Sbjct: 1281 NDFLGFAL 1288



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 163/343 (47%), Gaps = 56/343 (16%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSS---------------- 43
            +  +K L+ L L G   +  +PSS++    LE+L L GC+N ++                
Sbjct: 684  IGDVKMLTYLNLGGCEKLQSLPSSMKF-ESLEVLHLNGCRNFTNFPEVHENMKHLKELYL 742

Query: 44   -------LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
                   LP +I SL  L  L+LS CS  KKFP+I  +M+ L +L L+GT I E+PSSI 
Sbjct: 743  QKSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGIKELPSSIG 802

Query: 97   LLPGLELLYLNECKNLVR-----------------------LPSSINGLKSLKTLNLSGC 133
             L  LE+L L+EC N  +                       LPSSI  L SL+ LNLS C
Sbjct: 803  DLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTSLEILNLSKC 862

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--NEPPASASWHL 191
             K E  PD    +E L +L +S + I+   S+I  +K+L+ L        E P S  W L
Sbjct: 863  SKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKELSLDKTFIKELPKSI-WSL 921

Query: 192  HLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-N 249
                  L    C      P +   + SL  L++ +  + E  +P  I +L  L  L L N
Sbjct: 922  E-ALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITE--LPLSIGHLTRLNSLNLEN 978

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
              N  +LP+SI  L +L+ L L  C  L++ P+I  +++ +R+
Sbjct: 979  CKNLRSLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRS 1021



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 148/332 (44%), Gaps = 53/332 (15%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L +L+L  ++I ++    + L  L+++ L   K L+ +P   S +  L  L L GC  
Sbjct: 618 ENLVELHLRKSTIKQLWKRSKGLEKLKVIDLSYSKVLTKMP-KFSRMPKLEILNLEGCIS 676

Query: 65  LKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLV---------- 113
           L+K    +  ++ L+ L L G   +  +PSS++    LE+L+LN C+N            
Sbjct: 677 LRKLHSSIGDVKMLTYLNLGGCEKLQSLPSSMKF-ESLEVLHLNGCRNFTNFPEVHENMK 735

Query: 114 -------------RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
                         LPSSI  L SL+ L+LS C   +  P+  G ++ L EL ++GT I+
Sbjct: 736 HLKELYLQKSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGIK 795

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF------------------------N 196
              SSI  + +L  L  S C+        H ++ F                         
Sbjct: 796 ELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTSLE 855

Query: 197 LLGKSSCPVALMLPSL-TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
           +L  S C      P +   +  L KL LS+ G+ E  +PS+I NL  LKEL L++     
Sbjct: 856 ILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKE--LPSNIGNLKHLKELSLDKTFIKE 913

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           LP SI  L  L+ L L  C   +  P+I  N+
Sbjct: 914 LPKSIWSLEALQTLSLRGCSNFEKFPEIQRNM 945



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 79/149 (53%), Gaps = 7/149 (4%)

Query: 655  DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
            ++FP+I + +        + T I EL L+I  L  L  L L  CKNL  LP +I  LK L
Sbjct: 936  EKFPEIQRNMGSLLDLEIEETAITELPLSIGHLTRLNSLNLENCKNLRSLPSSICRLKSL 995

Query: 708  STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
              L+L+  S    FPEI    + L  + L GTAI GLP+SIE L       L +C NL++
Sbjct: 996  KHLSLNCCSNLEAFPEILEDMEHLRSLELRGTAITGLPSSIEHLRSLQWLKLINCYNLEA 1055

Query: 768  LPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            LP++I  L  L  +    CSKL N+ + L
Sbjct: 1056 LPNSIGNLTCLTTLVVRNCSKLHNLPDNL 1084



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 15/169 (8%)

Query: 647  CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+     ++FPDI        ++    + I+EL   I  L  L +L+L+    ++ LP+
Sbjct: 862  CSKF----EKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKELSLDKT-FIKELPK 916

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I +L+ L TL+L G S F +FPEI  +   LL++ +E TAI  LP SI  L+     NL
Sbjct: 917  SIWSLEALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITELPLSIGHLTRLNSLNL 976

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE---SLEVR 805
            ++CKNL+SLPS+I  L+SL+ +  + CS L+   E L  +E   SLE+R
Sbjct: 977  ENCKNLRSLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLELR 1025



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 123/274 (44%), Gaps = 32/274 (11%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           S +K+  +    +E L  + L  + +         +P LE+L L  C +L +L SSI  +
Sbjct: 628 STIKQLWKRSKGLEKLKVIDLSYSKVLTKMPKFSRMPKLEILNLEGCISLRKLHSSIGDV 687

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG------------------------TA 158
           K L  LNL GC KL+++P ++ K ESLE L ++G                        +A
Sbjct: 688 KMLTYLNLGGCEKLQSLPSSM-KFESLEVLHLNGCRNFTNFPEVHENMKHLKELYLQKSA 746

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCS 217
           I    SSI  + +L  L  S C+        H ++ F   L  +   +  +  S+  + S
Sbjct: 747 IEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLRELRLNGTGIKELPSSIGDLTS 806

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L  LBLS+C   E   P    N+  L+EL+LN      LP+SI  L +LE L L  C + 
Sbjct: 807 LEILBLSECSNFE-KFPGIHGNMKFLRELHLNGTRIKELPSSIGSLTSLEILNLSKCSKF 865

Query: 278 QSLPQIPPNLQFVRA-----NGCSSLVTLFGALK 306
           +  P I  N++ +R      +G   L +  G LK
Sbjct: 866 EKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLK 899



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 24/142 (16%)

Query: 686 LTLNGCKN-----------------------LERLPRTISALKYLSTLNLSGLSKFREFP 722
           L LNGC+N                       +E LP +I +L  L  L+LS  S F++FP
Sbjct: 716 LHLNGCRNFTNFPEVHENMKHLKELYLQKSAIEELPSSIGSLTSLEILDLSECSNFKKFP 775

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI  +   L E+ L GT I+ LP+SI  L+   + BL +C N +  P     ++ LR ++
Sbjct: 776 EIHGNMKFLRELRLNGTGIKELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELH 835

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
            +G +++K +  ++G + SLE+
Sbjct: 836 LNG-TRIKELPSSIGSLTSLEI 856



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L LNG   ++ LP +I  L  L  LBLS  S F +FP I  +   L E+HL GT I+
Sbjct: 784 LRELRLNGT-GIKELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIK 842

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY---------PSGCSKLKNVT 793
            LP+SI  L+   + NL  C   +  P     +  LR +Y         PS    LK++ 
Sbjct: 843 ELPSSIGSLTSLEILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLK 902

Query: 794 E-TLGKVESLEVRLSSWNRPKMQ 815
           E +L K    E+  S W+   +Q
Sbjct: 903 ELSLDKTFIKELPKSIWSLEALQ 925


>gi|82794024|gb|ABB91439.1| MRGH-J [Cucumis melo]
          Length = 1007

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 181/302 (59%), Gaps = 9/302 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++++ +L  L L+G   + E+  S+ +L  L  L LK CK+L S+   IS L+ L+ L L
Sbjct: 663 LSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNIS-LESLKILIL 721

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS+L+ FP+IV +M+ L++L+LDGT+I ++ +SI  L  L LL L  CKNL+ LP++I
Sbjct: 722 SGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAI 781

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L S+K L L GC KL+ +PD+LG +  LE+LDVSGT+I     S+ L+ NL++L   G
Sbjct: 782 GCLTSIKHLALGGCSKLDQIPDSLGNISCLEKLDVSGTSISHIPLSLRLLTNLKALNCKG 841

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLT---GVCSLTKLDLSDCGLGEAAIPSD 236
            +        H   P     +S+   +  L  +T      S+  L+ SDC L +  IP D
Sbjct: 842 LSRKLC----HSLFPLWSTPRSNDSHSFGLRLITCFSNFHSVKVLNFSDCKLADGDIPDD 897

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           +  L SL  L L+RN F  LP S+  L+NL  L L++C RL+SLP+ P +L +V A  C 
Sbjct: 898 LSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCV 957

Query: 297 SL 298
           SL
Sbjct: 958 SL 959



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 88/141 (62%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL+    ++EL L++ +L  L+ L L  CK+L+ +   IS L+ L  L LSG S+   FP
Sbjct: 673 VLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNIS-LESLKILILSGCSRLENFP 731

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI  +   L E+HL+GTAIR L ASI  L+  +L +L++CKNL +LP+ I  L S++ + 
Sbjct: 732 EIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLA 791

Query: 783 PSGCSKLKNVTETLGKVESLE 803
             GCSKL  + ++LG +  LE
Sbjct: 792 LGGCSKLDQIPDSLGNISCLE 812



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 18/128 (14%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CSRL    + FP+IV       ++  DGT IR+L  +I  L  LV L L  CKNL  LP 
Sbjct: 724 CSRL----ENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPN 779

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I  L  +  L L G SK  + P+   +   L ++ + GT+I  +P S+ L     L+NL
Sbjct: 780 AIGCLTSIKHLALGGCSKLDQIPDSLGNISCLEKLDVSGTSISHIPLSLRL-----LTNL 834

Query: 760 K--DCKNL 765
           K  +CK L
Sbjct: 835 KALNCKGL 842


>gi|408537062|gb|AFU75184.1| nematode resistance-like protein, partial [Solanum boliviense]
          Length = 307

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/288 (45%), Positives = 188/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L+N+PD LG +  LEEL  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 131 NLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLERLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKAIYANECTSLMSI 290



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGKLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  TA+  L AS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCS LKN+ +
Sbjct: 126 VSGCSNLKNLPD 137



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 24/197 (12%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
            LK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L+ C  L           
Sbjct: 131 NLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKRLSLSGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SLE L + G      P 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDC----NISDGGILSNLGFLPSLERLILDGNNFSNIPA 246

Query: 164 SSIFLMKNLRSLYFSGC 180
           +SI  +  L++L   GC
Sbjct: 247 ASISRLTRLKTLKLLGC 263



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + ELS ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELYLGATALSELSASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
           LK L TL++SG S  +  P+       L E+H   TAI+ +P+S+ LL
Sbjct: 118 LKCLKTLDVSGCSNLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLL 165


>gi|51477387|gb|AAU04760.1| MRGH12 [Cucumis melo]
          Length = 1007

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 183/301 (60%), Gaps = 7/301 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++++ +L  L L+G   + E+  S+ +L  L  L LK CK+L S+   IS L+ L+ L L
Sbjct: 663 LSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNIS-LESLKILIL 721

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS+L+ FP+IV +M+ L++L+LDGT+I ++ +SI  L  L LL L  CKNL+ LP++I
Sbjct: 722 SGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAI 781

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L S+K L L GC KL+ +PD+LG +  L++LDVSGT+I     S+ L+ NL++L   G
Sbjct: 782 GCLTSIKHLALGGCSKLDQIPDSLGNISCLKKLDVSGTSISHIPLSLRLLTNLKALNCKG 841

Query: 180 CNEPPASASWHL-HLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
            +     + + L   P N    +S    L L +  +   S+  L+ SDC L +  IP D+
Sbjct: 842 LSRKLCHSLFPLWSTPRN---NNSHSFGLRLITCFSNFHSVKVLNFSDCKLADGDIPDDL 898

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             L SL  L L+RN F  LP S+  L+NL  L L++C RL+SLP+ P +L +V A  C S
Sbjct: 899 SCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVS 958

Query: 298 L 298
           L
Sbjct: 959 L 959



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 88/141 (62%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL+    ++EL L++ +L  L+ L L  CK+L+ +   IS L+ L  L LSG S+   FP
Sbjct: 673 VLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNIS-LESLKILILSGCSRLENFP 731

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI  +   L E+HL+GTAIR L ASI  L+  +L +L++CKNL +LP+ I  L S++ + 
Sbjct: 732 EIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPNAIGCLTSIKHLA 791

Query: 783 PSGCSKLKNVTETLGKVESLE 803
             GCSKL  + ++LG +  L+
Sbjct: 792 LGGCSKLDQIPDSLGNISCLK 812



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 18/128 (14%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CSRL    + FP+IV       ++  DGT IR+L  +I  L  LV L L  CKNL  LP 
Sbjct: 724 CSRL----ENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVLLDLRNCKNLLTLPN 779

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            I  L  +  L L G SK  + P+   +   L ++ + GT+I  +P S+ L     L+NL
Sbjct: 780 AIGCLTSIKHLALGGCSKLDQIPDSLGNISCLKKLDVSGTSISHIPLSLRL-----LTNL 834

Query: 760 K--DCKNL 765
           K  +CK L
Sbjct: 835 KALNCKGL 842


>gi|297794743|ref|XP_002865256.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311091|gb|EFH41515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 208/399 (52%), Gaps = 40/399 (10%)

Query: 22  SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKL 81
           SSI  +  L  L  + C +L SLP  IS LK L++L LSGCSKL+ FP I    E++  L
Sbjct: 567 SSIRQMDSLVYLNFRECTSLKSLPKGIS-LKSLKSLILSGCSKLRTFPTIS---ENIESL 622

Query: 82  YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
           YLDGT+I  VP SI+ L  L +L L +C  L  LPS++  +KSL+ L LSGC KL+  P+
Sbjct: 623 YLDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSKLKCFPE 682

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
               +E LE L +  TAI++    +  M NL+   F G ++   S  + L LPF      
Sbjct: 683 IDEDMEHLEILLMDDTAIKQIPIKM-CMSNLKMFTFGG-SKFQGSTGYEL-LPF------ 733

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                      +G   L+ L L+DC L +  +P++   L S+  L L+RNN   LP SI 
Sbjct: 734 -----------SGCSHLSDLYLTDCNLHK--LPNNFSCLSSVHSLCLSRNNLEYLPESIK 780

Query: 262 GLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL------KLCRSKYTII 315
            L +L+ L+L+ C++L SLP +P NLQ++ A+ C+SL T+   +      +  +S +   
Sbjct: 781 ILHHLKSLDLKHCRKLNSLPVLPSNLQYLDAHDCASLETVANPMTHLVLAERVQSTFLFT 840

Query: 316 NCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK-------LSIVFPGSQIPKWFMYQNE 368
           +C    +  ++N +A + L+  +   A     HK        S+ FPGS +P WF  Q  
Sbjct: 841 DCFKLNREAQENIVAHAQLKSQILANACLKRNHKGLVLEPLASVSFPGSDLPLWFRNQRM 900

Query: 369 GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
           G+SI    P +  + +K  G ++C V     +   T  F
Sbjct: 901 GTSIDTHLPPHWCD-SKFRGLSLCVVVSFKDYEDQTSRF 938



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 105/226 (46%), Gaps = 50/226 (22%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +++  LYLDGT+I  VP SI+ L  L +L LK C  L  LP  +  +K L+ L LSGCSK
Sbjct: 617 ENIESLYLDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSK 676

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVP---------------------SSIELLP---- 99
           LK FP+I   ME L  L +D T+I ++P                     +  ELLP    
Sbjct: 677 LKCFPEIDEDMEHLEILLMDDTAIKQIPIKMCMSNLKMFTFGGSKFQGSTGYELLPFSGC 736

Query: 100 -GLELLYLNEC----------------------KNLVRLPSSINGLKSLKTLNLSGCCKL 136
             L  LYL +C                       NL  LP SI  L  LK+L+L  C KL
Sbjct: 737 SHLSDLYLTDCNLHKLPNNFSCLSSVHSLCLSRNNLEYLPESIKILHHLKSLDLKHCRKL 796

Query: 137 ENVPDTLGKVESLEELD-VSGTAIRRPTSSIFLMKNLRSLY-FSGC 180
            ++P     ++ L+  D  S   +  P + + L + ++S + F+ C
Sbjct: 797 NSLPVLPSNLQYLDAHDCASLETVANPMTHLVLAERVQSTFLFTDC 842



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 78/131 (59%), Gaps = 4/131 (3%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  +  LV L    C +L+ LP+ IS LK L +L LSG SK R FP I+ + + L   +
Sbjct: 568 SIRQMDSLVYLNFRECTSLKSLPKGIS-LKSLKSLILSGCSKLRTFPTISENIESL---Y 623

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L+GTAI+ +P SI+ L    + NLK C  L+ LPS +  ++SL+ +  SGCSKLK   E 
Sbjct: 624 LDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKSLQELILSGCSKLKCFPEI 683

Query: 796 LGKVESLEVRL 806
              +E LE+ L
Sbjct: 684 DEDMEHLEILL 694



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 21/175 (12%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS+L        +I  +  DGT I+ +  +I+ L  L  L L  C  L  LP  +  +K 
Sbjct: 606 CSKLRTFPTISENIESLYLDGTAIKRVPESIDSLRYLAVLNLKKCCKLRHLPSNLCKMKS 665

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L  L LSG SK + FPEI    + L  + ++ TAI+ +P  +       +SNL   K   
Sbjct: 666 LQELILSGCSKLKCFPEIDEDMEHLEILLMDDTAIKQIPIKM------CMSNL---KMFT 716

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCV 821
              S   G     ++  SGCS L             ++ L+  N  K+ N+F C+
Sbjct: 717 FGGSKFQGSTGYELLPFSGCSHLS------------DLYLTDCNLHKLPNNFSCL 759


>gi|449447743|ref|XP_004141627.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1127

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 157/483 (32%), Positives = 235/483 (48%), Gaps = 57/483 (11%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             A++ +L  L L D TS+  +  SI     L  L+LK C NL++LP  I+ +K L  L L
Sbjct: 674  FANIPNLKRLELEDCTSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHIN-IKVLEVLIL 732

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSK+KK P+   +   L +L+LDGTSI+ +PSSI  L  L +L L  CK L+ + ++I
Sbjct: 733  SGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAI 792

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT---SSIFLMKNLRSLY 176
              + SL++L++SGC KL +       VE L E++V  T  RR     ++IF     + ++
Sbjct: 793  E-MTSLQSLDVSGCSKLGSRKGKGDNVE-LGEVNVRETTRRRRNDDCNNIF-----KEIF 845

Query: 177  FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
               CN P             + G         +PSL G+ SLTKL+L DC L    IP  
Sbjct: 846  LWLCNTPATG----------IFG---------IPSLAGLYSLTKLNLKDCNL--EVIPQG 884

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            I+ + SL EL L+ NNF  LP SIS L NL+ L +  CK+L   P++PP + F+ +  C 
Sbjct: 885  IECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCI 944

Query: 297  SLVTLFGALKL----CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
            SL       K+       +  ++NC         + L IS +++    +         +I
Sbjct: 945  SLKDFIDISKVDNLYIMKEVNLLNCYQMANNKDFHRLIISSMQKMFFRKGT------FNI 998

Query: 353  VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPA 412
            + PGS+IP WF  +  GSS+ +       N N ++ FA+C V  +   S       +  +
Sbjct: 999  MIPGSEIPDWFTTRKMGSSVCMEWDPDAPNTN-MIRFALCVVIGLSDKSDVC----NVSS 1053

Query: 413  HELECSMDGSGEGHYIYFRGK----FGHVVS-----DHLWLLFLPRHGHNWQFESNLIRL 463
              +  S+ G          G      G +VS     DH+W+  LPR G   +  SN   +
Sbjct: 1054 FTIIASVTGKDRNDTNLKNGDDLLVDGFLVSGMKKLDHIWMFVLPRTGTLLRKISNYKEI 1113

Query: 464  SFR 466
             FR
Sbjct: 1114 KFR 1116



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 2/154 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T +  +  +I     L+ L+L  C NL  LP  I+ +K L  L LSG SK ++ PE
Sbjct: 685 LEDCTSLVNIHPSIFTAEKLIFLSLKDCINLTNLPSHIN-IKVLEVLILSGCSKVKKVPE 743

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
            + + ++LL++HL+GT+I  LP+SI  LS   + +L +CK L  + + I  + SL+ +  
Sbjct: 744 FSGNTNRLLQLHLDGTSISNLPSSIASLSHLTILSLANCKMLIDISNAIE-MTSLQSLDV 802

Query: 784 SGCSKLKNVTETLGKVESLEVRLSSWNRPKMQND 817
           SGCSKL +       VE  EV +    R +  +D
Sbjct: 803 SGCSKLGSRKGKGDNVELGEVNVRETTRRRRNDD 836


>gi|255563202|ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223538080|gb|EEF39691.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1158

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/399 (34%), Positives = 210/399 (52%), Gaps = 59/399 (14%)

Query: 19   EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
            +VPSSI  LT L  ++L+  KN+ S P TI  L+ L TL+LSGCS LK FP++     ++
Sbjct: 668  KVPSSIGQLTKLTFMSLRCSKNIRSFPTTID-LQSLETLDLSGCSNLKIFPEV---SRNI 723

Query: 79   SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
              LYL+ T+I EVP SIE L  L +L +  C  L  +PS+I  LKSL  L LSGC KLE+
Sbjct: 724  RYLYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLILSGCKKLES 783

Query: 139  VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLL 198
             P+ L     L+ L +  TA+     +   +K L  L FS C++               L
Sbjct: 784  FPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDCSK---------------L 828

Query: 199  GKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
            GK        LP ++  + SL +L    C L  + +P+D+  L S+ EL L+ +NF T+P
Sbjct: 829  GK--------LPKNMKNLKSLAELRAGGCNL--STLPADLKYLSSIVELNLSGSNFDTMP 878

Query: 258  ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR-------- 309
            A I+ L  L  + +  CKRLQSLP++PP ++++ A  C SLV++ G  +L          
Sbjct: 879  AGINQLSKLRWINVTGCKRLQSLPELPPRIRYLNARDCRSLVSISGLKQLFELGCSNSLD 938

Query: 310  -SKYTIINCIDSLKLLRKNGLAI-----------SMLREYLELQAVSDPGHKLSIVFPGS 357
               +   NC    KL + N   I           +M R++ + +   +    +   +PG+
Sbjct: 939  DETFVFTNC---FKLDQDNWADILASAQLKIQHFAMGRKHYDRELYDETF--ICFTYPGT 993

Query: 358  QIPKWFMYQNEGSSITVTR--PSYLYNVNKVVGFAICCV 394
            +IP+WF  ++ GSS+T+    P +L   ++ +GF++C V
Sbjct: 994  EIPEWFADKSIGSSVTIQHLPPDWLN--HRFLGFSVCLV 1030



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 1/176 (0%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +++  LYL+ T+I EVP SIE L+ L +L +K C  L  +P TI  LK L  L LSGC K
Sbjct: 721 RNIRYLYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLILSGCKK 780

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+ FP+I+ +   L  L LD T++  +P +   L  L +L  ++C  L +LP ++  LKS
Sbjct: 781 LESFPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDCSKLGKLPKNMKNLKS 840

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           L  L  +G C L  +P  L  + S+ EL++SG+      + I  +  LR +  +GC
Sbjct: 841 LAELR-AGGCNLSTLPADLKYLSSIVELNLSGSNFDTMPAGINQLSKLRWINVTGC 895



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 4/135 (2%)

Query: 657 FPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL 712
           FP++ + +     + T I+E+ L+IE L  LV L +  C  LE +P TI  LK L  L L
Sbjct: 716 FPEVSRNIRYLYLNETAIQEVPLSIEHLSKLVVLNMKNCNELECIPSTIFKLKSLGVLIL 775

Query: 713 SGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
           SG  K   FPEI  + + L  + L+ TA+  LP +   L    + N  DC  L  LP  +
Sbjct: 776 SGCKKLESFPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDCSKLGKLPKNM 835

Query: 773 NGLRSLRMMYPSGCS 787
             L+SL  +   GC+
Sbjct: 836 KNLKSLAELRAGGCN 850



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 22/154 (14%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FP+I++  +       D T +  L      L  L  L  + C  L +LP+ +  LK L
Sbjct: 782 ESFPEILETTNHLQHLSLDETAMVNLPDTFCNLKALNMLNFSDCSKLGKLPKNMKNLKSL 841

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
           + L   G +     P        ++E++L G+    +PA I  LS     N+  CK L+S
Sbjct: 842 AELRAGGCN-LSTLPADLKYLSSIVELNLSGSNFDTMPAGINQLSKLRWINVTGCKRLQS 900

Query: 768 LPS--------------TINGLRSLRMMYPSGCS 787
           LP               ++  +  L+ ++  GCS
Sbjct: 901 LPELPPRIRYLNARDCRSLVSISGLKQLFELGCS 934


>gi|297741032|emb|CBI31344.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 155/449 (34%), Positives = 228/449 (50%), Gaps = 62/449 (13%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNEC 109
           L+ L+ ++LS    L + P + + + +L +L L D  S+ +V SS+  L  L  L L  C
Sbjct: 135 LEKLKFMDLSYSRYLIETPNL-SGVTNLKRLVLEDCVSLCKVHSSLGDLKNLNFLNLKNC 193

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           K L  LPSS + LKSL+   LSGC K E  P+  G +E L E      AI    SS   +
Sbjct: 194 KTLKSLPSSTSNLKSLEICILSGCSKFEEFPENFGNLEMLREFYADEIAIGVLPSSFSFL 253

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
           +NL+ L F G   PP++  W       LL +SS  +  +L  L+G+CSL  LDLSDC L 
Sbjct: 254 RNLKILSFKGYKGPPSTL-W-------LLPRSSNSIGSILQPLSGLCSLINLDLSDCNLS 305

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
           +      +  L SLKELYL  N+FVTLP++IS L NLE LELE+CKRLQ L ++P ++  
Sbjct: 306 DETNLGSLGLLSSLKELYLCGNDFVTLPSTISRLSNLEWLELENCKRLQVLSELPSSVYH 365

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK 349
           V A  C+SL  +  + ++ +  +  I  +D +      G+    L+ ++           
Sbjct: 366 VDAKNCTSLKDI--SFQVLKPLFPPIMKMDPVM-----GVLFPALKVFI----------- 407

Query: 350 LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY---- 405
                PGS+IP W  YQ+ GS +    P   +N N ++GFA+  V   P+ S   +    
Sbjct: 408 -----PGSRIPDWISYQSSGSEVKAKLPPNWFNSN-LLGFAMSFVI-FPQVSEAFFSADV 460

Query: 406 LFHSYPAHE-LECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNL---- 460
           LF    + + + CS+         Y+  K   + SDH+ L +LP H    Q  SN     
Sbjct: 461 LFDDCSSFKIITCSL---------YYDRK---LESDHVCLFYLPFH----QLMSNYPQGS 504

Query: 461 -IRLSFRSIS-DPTWKVKRCGFHPIYMHE 487
            I++SF + S D    +KRCG   +Y +E
Sbjct: 505 HIKVSFAAFSMDAGIAIKRCGVGLVYSNE 533



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 5/131 (3%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+ +V SS+  L  L  L LK CK L SLP + S+LK L    LSGCSK ++FP+  
Sbjct: 168 DCVSLCKVHSSLGDLKNLNFLNLKNCKTLKSLPSSTSNLKSLEICILSGCSKFEEFPENF 227

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELL----YLNECKNLVRLPSSINGLKSLKTL 128
            ++E L + Y D  +I  +PSS   L  L++L    Y      L  LP S N + S+   
Sbjct: 228 GNLEMLREFYADEIAIGVLPSSFSFLRNLKILSFKGYKGPPSTLWLLPRSSNSIGSILQ- 286

Query: 129 NLSGCCKLENV 139
            LSG C L N+
Sbjct: 287 PLSGLCSLINL 297



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL D   + ++  ++  L  L  L L  CK L+ LP + S LK L    LSG SKF EFP
Sbjct: 165 VLEDCVSLCKVHSSLGDLKNLNFLNLKNCKTLKSLPSSTSNLKSLEICILSGCSKFEEFP 224

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK--DCKNLKSLPSTI 772
           E   + + L E + +  AI  LP+S      + L NLK    K  K  PST+
Sbjct: 225 ENFGNLEMLREFYADEIAIGVLPSSF-----SFLRNLKILSFKGYKGPPSTL 271



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 30/45 (66%)

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           NLK+CK LKSLPS+ + L+SL +   SGCSK +   E  G +E L
Sbjct: 189 NLKNCKTLKSLPSSTSNLKSLEICILSGCSKFEEFPENFGNLEML 233


>gi|449447549|ref|XP_004141530.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
 gi|449481488|ref|XP_004156198.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1009

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 179/300 (59%), Gaps = 5/300 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++++ +L  L L+G T + E+  S+  L  L  L LK CK+L S+   IS L+ L+ L L
Sbjct: 662 LSTVPNLERLVLNGCTRLQELHQSVGTLKHLIFLDLKDCKSLKSICSNIS-LESLKILIL 720

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS+L+ FP+IV +M+ + +L+LDGT+I ++  SI  L  L LL L  CKNL  LP++I
Sbjct: 721 SGCSRLENFPEIVGNMKLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAI 780

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L S++ L L GC KL+ +PD+LG +  L++LDVSGT+I     ++ L+KNL  L   G
Sbjct: 781 GCLTSIEHLALGGCSKLDKIPDSLGNISCLKKLDVSGTSISHIPFTLRLLKNLEVLNCEG 840

Query: 180 CNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
            +     + + L   P N    S      ++  LT   S+  L+ SDC L +  IP D+ 
Sbjct: 841 LSRKLCYSLFLLWSTPRN--NNSHSFGLWLITCLTNFSSVKVLNFSDCKLVDGDIPDDLS 898

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            L SL  L L+RN F  LP S+S L+NL  L L++C RL+SLP+ P +L +V A  C SL
Sbjct: 899 CLSSLHFLDLSRNLFTNLPHSLSQLINLRCLVLDNCSRLRSLPKFPVSLLYVLARDCVSL 958



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 85/141 (60%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL+  T ++EL  ++  L  L+ L L  CK+L+ +   IS L+ L  L LSG S+   FP
Sbjct: 672 VLNGCTRLQELHQSVGTLKHLIFLDLKDCKSLKSICSNIS-LESLKILILSGCSRLENFP 730

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI  +   + E+HL+GTAIR L  SI  L+  +L +L+ CKNL++LP+ I  L S+  + 
Sbjct: 731 EIVGNMKLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPNAIGCLTSIEHLA 790

Query: 783 PSGCSKLKNVTETLGKVESLE 803
             GCSKL  + ++LG +  L+
Sbjct: 791 LGGCSKLDKIPDSLGNISCLK 811



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 11/112 (9%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CSRL    + FP+IV  +        DGT IR+L ++I  L  LV L L  CKNL  LP 
Sbjct: 723 CSRL----ENFPEIVGNMKLVKELHLDGTAIRKLHVSIGKLTSLVLLDLRYCKNLRTLPN 778

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
            I  L  +  L L G SK  + P+   +   L ++ + GT+I  +P ++ LL
Sbjct: 779 AIGCLTSIEHLALGGCSKLDKIPDSLGNISCLKKLDVSGTSISHIPFTLRLL 830


>gi|408537094|gb|AFU75200.1| nematode resistance-like protein, partial [Solanum tuberosum]
          Length = 307

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/288 (43%), Positives = 183/288 (63%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L  L LK C+NL +LP  I  L+ L  L LSGCSKLK FP+I   
Sbjct: 12  TSLVEIFFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  T+++E+ +S+E L G+ ++ L+ CK+L  +PSSI  LK LKTLN+SGC 
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD LG +  LEEL  + TAI+   SS+ L+KN + L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSLRGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L L+ NNF 
Sbjct: 189 ----GQKS--MGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++P AS S    L  L L  C+RL+SLP++PP+++ + A+ C+SL+++
Sbjct: 243 SIPAASKSRPTQLRALALAGCRRLESLPELPPSIKGIYADECTSLMSI 290



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E+  +I  L  LV L L  C+NL+ LP+ I  L+ L  L LSG SK + FP
Sbjct: 7   VLEECTSLVEIFFSIGDLGKLVSLNLKNCRNLKTLPKRIR-LENLEILVLSGCSKLKTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    ++L E++L  TA+  L AS+E LSG  + NL  CK+L+S+PS+I  L+ L+ + 
Sbjct: 66  EIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLN 125

Query: 783 PSGCSKLKNVTE 794
            SGCSKLKN+ +
Sbjct: 126 VSGCSKLKNLPD 137



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 108/193 (55%), Gaps = 16/193 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  T+++E+ +S+E L+G+ ++ L  CK+L S+P +I  LKCL+TL +SGCS
Sbjct: 71  MNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPSSIFRLKCLKTLNVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSINGL 122
           KLK  P  +  +  L +L+   T+I  +PSS+ LL   + L L  C  L  ++ SS +G 
Sbjct: 131 KLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSLRGCNALSSQVSSSSHGQ 190

Query: 123 KSL--KTLNLSGCCKLE-------NVPD-----TLGKVESLEELDVSGTAIRR-PTSSIF 167
           KS+  K  NLSG C L        N+ D      LG + SLE L + G      P +S  
Sbjct: 191 KSMGVKFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEGLILDGNNFSSIPAASKS 250

Query: 168 LMKNLRSLYFSGC 180
               LR+L  +GC
Sbjct: 251 RPTQLRALALAGC 263



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 11/126 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++         T + ELS ++E L G+  + L+ CK+LE +P 
Sbjct: 58  CSKL----KTFPEIEEKMNRLAELYLGATALSELSASVENLSGVGVINLSYCKHLESIPS 113

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TLN+SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L
Sbjct: 114 SIFRLKCLKTLNVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNPKHLSL 173

Query: 760 KDCKNL 765
           + C  L
Sbjct: 174 RGCNAL 179


>gi|359493489|ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 162/463 (34%), Positives = 243/463 (52%), Gaps = 38/463 (8%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL-SSLPVTISSLKCLRTLELSGCSK 64
            +L  L+  G  +  +PS+       +L+ L  C +L   L     + + L+ ++LS    
Sbjct: 577  NLRSLHWHGYPLKSLPSNFH---PEKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQH 633

Query: 65   LKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L K P   A+ + L ++ L+G TS+ ++  SI  L  L  L L  C  L  LP SI  L 
Sbjct: 634  LTKTPDFSAAPK-LRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLENLPQSICELI 692

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            SL+TL LSGC KL+ +PD LG+++ L EL+V GT I+  TSSI L+ NL +L  +GC   
Sbjct: 693  SLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGG 752

Query: 184  PASASWHLHLPFNLLGKSSCPVA-LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
             + +        NL+   S P A L LP L+G+ SL  L+LSDC L E A+PSD+ +L S
Sbjct: 753  GSKSR-------NLISFRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPSDLSSLSS 805

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL- 301
            L+ LYL++N+F+TLPAS+S L  L  L LE CK L+SLP++P +++++ A+ C+SL TL 
Sbjct: 806  LENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTSLETLS 865

Query: 302  ----FGALKLCRSKYTIINCI--------DSLKLLRKNGLAISMLREYLELQAVSDPGHK 349
                    KL   ++   NC         D ++ + +     S + + LE        H 
Sbjct: 866  CSSSTYTSKLGDLRFNFTNCFRLGENQGSDIVETILEGTQLASSMAKLLEPDERGLLQHG 925

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
               + PGS+IPKWF +Q+ GS + V  P + YN  K +G A C VF       G     +
Sbjct: 926  YQALVPGSRIPKWFTHQSVGSKVIVELPPHWYNT-KWMGLAACVVFNFKGAVDGYR--GT 982

Query: 410  YPAHELECSMDG---SGEGHYIYFRGKFGHVVSDHLWLLFLPR 449
            +P   L C ++G   +   H   +      + SDH W  ++ R
Sbjct: 983  FP---LACFLNGRYATLSDHNSLWTSSI--IESDHTWFAYISR 1020



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 6/141 (4%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ +G T + +L  +I  L  L+ L L GC  LE LP++I  L  L TL LSG S
Sbjct: 644 PKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLENLPQSICELISLQTLTLSGCS 703

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++ P+       L+E++++GT I+ + +SI LL+     +L  CK   S    +   R
Sbjct: 704 KLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFR 763

Query: 777 S-----LRMMYPSGCSKLKNV 792
           S     L++ + SG   LK++
Sbjct: 764 SSPAAPLQLPFLSGLYSLKSL 784



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 22/157 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L +L +DGT I EV SSI LLT LE L+L GCK   S                 
Sbjct: 712 LGRLQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCKGGGSKSRNLISFRSSPAAPLQ 771

Query: 44  LPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           LP  +S L  L++L LS C+ L+   P  ++S+  L  LYLD  S   +P+S+  L  L 
Sbjct: 772 LPF-LSGLYSLKSLNLSDCNLLEGALPSDLSSLSSLENLYLDKNSFITLPASLSRLSRLR 830

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            L L  CK+L  LP   +   S++ LN   C  LE +
Sbjct: 831 SLTLEHCKSLRSLPELPS---SIEYLNAHSCTSLETL 864


>gi|332330339|gb|AEE43925.1| TIR-NBS-LRR resistance protein muRdr1A [Rosa multiflora]
          Length = 1119

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 231/510 (45%), Gaps = 88/510 (17%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G T++ E+  SI LL  L +  L+ C ++ SLP  + +++ L T ++
Sbjct: 646  FTGIPNLEKLILEGCTNLVEIHPSIALLKRLRIWNLRNCTSIKSLPSEV-NMEFLETFDV 704

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLK  P+ V   + LSK  L GT++ ++PSSIELLP                    
Sbjct: 705  SGCSKLKMIPEFVGQTKRLSKFCLGGTAVEKLPSSIELLP-------------------- 744

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                                       ESL ELD++GT IR    S+FL +NL    F  
Sbjct: 745  ---------------------------ESLVELDLNGTVIREQPHSLFLKQNLIVSSFGS 777

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                KS  P+  ++ SL  +  LT L L+DC L E  IP+DI +
Sbjct: 778  FRR-----------------KSPQPLIPLIASLKHLSFLTTLKLNDCNLCEGEIPNDIGS 820

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-VRANGCSSL 298
            L SL++L L  NNFV+LPASI  L  L  + +E+CKRLQ LP++P      V  N C+SL
Sbjct: 821  LSSLEKLELRGNNFVSLPASIHLLSKLYFINVENCKRLQQLPELPARQSLRVTTNNCTSL 880

Query: 299  VT-----LFGALKLCRSKYTI----INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK 349
                   +F       + +      +NC+ ++     +    S+L+ ++E Q        
Sbjct: 881  QVFPDPQVFPEPPNLSTPWNFSLISVNCLSAVGNQDASYFIYSVLKRWIE-QGNHRSFEF 939

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY-LFH 408
               + PGS+IP WF  Q+ G S+T   PS   N +K +GFA+C +   P        +F 
Sbjct: 940  FKYIIPGSEIPDWFNNQSVGDSVTEKLPSDECN-SKWIGFAVCALIVPPSAVPDEIKVFC 998

Query: 409  SYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSI 468
            S+ A+       G+G             +VS HL+L  L         E N + + F   
Sbjct: 999  SWNAYGTGLIGTGTGSW--------LKQIVSGHLFLAVLASPSRRKPPE-NCLEVKFVFK 1049

Query: 469  SDPTWKVKRCGFHPIYMHEVEEFDETTKQS 498
             DP   +K+CG   +Y H++EE      QS
Sbjct: 1050 VDPCSHLKKCGARALYEHDMEELISKMNQS 1079



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ E+  +I LL  L    L  C +++ LP  ++ +++L T ++SG S
Sbjct: 650 PNLEKLILEGCTNLVEIHPSIALLKRLRIWNLRNCTSIKSLPSEVN-MEFLETFDVSGCS 708

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE      +L +  L GTA+  LP+SIELL  +++
Sbjct: 709 KLKMIPEFVGQTKRLSKFCLGGTAVEKLPSSIELLPESLV 748



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I  L  L +++LS     R  P+ T   + L ++ LEG T +  +  SI LL
Sbjct: 615 NIDHLWNGIKYLGKLKSIDLSYSINLRRTPDFTGIPN-LEKLILEGCTNLVEIHPSIALL 673

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               + NL++C ++KSLPS +N +  L     SGCSKLK + E +G+ + L
Sbjct: 674 KRLRIWNLRNCTSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRL 723



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 32/154 (20%)

Query: 667 GTDIRELSLAIELL-FGLVQLTLNGC-------------------------KNLERLPRT 700
           GT + +L  +IELL   LV+L LNG                          K+ + L   
Sbjct: 730 GTAVEKLPSSIELLPESLVELDLNGTVIREQPHSLFLKQNLIVSSFGSFRRKSPQPLIPL 789

Query: 701 ISALKYLSTLNLSGLSKFR----EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           I++LK+LS L    L+       E P    S   L ++ L G     LPASI LLS    
Sbjct: 790 IASLKHLSFLTTLKLNDCNLCEGEIPNDIGSLSSLEKLELRGNNFVSLPASIHLLSKLYF 849

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            N+++CK L+ LP  +   +SLR+   + C+ L+
Sbjct: 850 INVENCKRLQQLPE-LPARQSLRVT-TNNCTSLQ 881


>gi|297744796|emb|CBI38064.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/321 (42%), Positives = 189/321 (58%), Gaps = 22/321 (6%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G TS+ +V  SI  L  L  L L+GCKNL S   +I  +  L+ L LSGCSK
Sbjct: 251 NLERLILEGCTSMVKVHPSIGALQKLIFLNLEGCKNLKSFASSIH-MNSLQILTLSGCSK 309

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LKKFP+++ +M+ L +L LD T++ E+PSSI  L GL LL L  CK LV LP S+  L S
Sbjct: 310 LKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTS 369

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L+ L L+GC +L+ +PD LG +  L  L+  G+ I+    SI L+ NL+ L  +GC +  
Sbjct: 370 LQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRN 429

Query: 185 ASAS-WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
              S W           SS  V L L SL  + S+  L LSDC L E A+PSD+ +L SL
Sbjct: 430 VVFSLW-----------SSPTVCLQLRSLLNLSSVKTLSLSDCNLSEGALPSDLSSLSSL 478

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
           + L L++NNF+T+PAS++ L  L  L L  CK LQS+P++P  +Q V A+ C SL T   
Sbjct: 479 ESLDLSKNNFITIPASLNRLSQLLYLSLSHCKSLQSVPELPSTIQKVYADHCPSLETF-- 536

Query: 304 ALKLCRSK------YTIINCI 318
           +L  C S+      +T  +C 
Sbjct: 537 SLSACASRKLNQLNFTFSDCF 557



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 86/146 (58%), Gaps = 14/146 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +MK L  L LD T++ E+PSSI  L GL LL L  CK L SLP ++  L  L+ L L+
Sbjct: 317 LENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLTSLQILTLA 376

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--NLV----- 113
           GCS+LKK P  + S+  L  L  DG+ I EVP SI LL  L++L L  CK  N+V     
Sbjct: 377 GCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSLAGCKKRNVVFSLWS 436

Query: 114 ------RLPSSINGLKSLKTLNLSGC 133
                 +L S +N L S+KTL+LS C
Sbjct: 437 SPTVCLQLRSLLN-LSSVKTLSLSDC 461



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 91/146 (62%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T + ++  +I  L  L+ L L GCKNL+    +I  +  L  L LSG S
Sbjct: 250 PNLERLILEGCTSMVKVHPSIGALQKLIFLNLEGCKNLKSFASSIH-MNSLQILTLSGCS 308

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPE+  +   L ++ L+ TA+R LP+SI  L+G +L NL +CK L SLP ++  L 
Sbjct: 309 KLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQSLCKLT 368

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL+++  +GCS+LK + + LG +  L
Sbjct: 369 SLQILTLAGCSELKKLPDELGSLRCL 394



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 17/145 (11%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP+++       Q+L D T +REL  +I  L GLV L L  CK L  LP+
Sbjct: 307 CSKL----KKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVLLNLTNCKKLVSLPQ 362

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           ++  L  L  L L+G S+ ++ P+   S   L+ ++ +G+ I+ +P SI LL+   + +L
Sbjct: 363 SLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVPPSITLLTNLQVLSL 422

Query: 760 KDCK------NLKSLPSTINGLRSL 778
             CK      +L S P+    LRSL
Sbjct: 423 AGCKKRNVVFSLWSSPTVCLQLRSL 447


>gi|332330346|gb|AEE43932.1| TIR-NBS-LRR resistance protein muRdr1H [Rosa multiflora]
          Length = 1122

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 169/530 (31%), Positives = 261/530 (49%), Gaps = 74/530 (13%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L   I  L  L++++LS    L + P     + +L KL L+G T++ ++  SI LL
Sbjct: 616  NIDHLWNGIKYLVNLKSIDLSYSINLTRTPDFTG-IPNLEKLVLEGCTNLVKIHPSIALL 674

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L +  L  CK++  LPS +N ++ L+T ++SGC KL+ + + + +++ L +L + GTA
Sbjct: 675  KRLRIWNLRNCKSIRSLPSEVN-MEFLETFDVSGCSKLKMISEFVMQMKRLSKLYLGGTA 733

Query: 159  IRRPTSSI-FLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPS 211
            + +  SSI  L ++L  L  SG    E P S     +L  +  G    KS  P+  +L S
Sbjct: 734  VEKLPSSIEHLSESLVVLDLSGIVIREQPYSRLLKQNLIASSFGLFPRKSPHPLIPLLAS 793

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L     L  L L+DC L E  IP+DI +L SL+ L L  NNFV+LPASI     LE++++
Sbjct: 794  LKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLQRLELRGNNFVSLPASIHL---LEDVDV 850

Query: 272  EDCKRLQSLPQIP--PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGL 329
            E+CKRLQ LP++P  PNL  +RAN                     +NCI+ L ++     
Sbjct: 851  ENCKRLQQLPELPDLPNLCRLRAN-------------------FWLNCINCLSMVGNQDA 891

Query: 330  A---ISMLREYLELQAVSD-----------PGHKLSIVFPGSQIPKWFMYQNEGSSITVT 375
            +    S+L+ ++E++A+S                   V PGS+IP+WF  Q+ G ++T  
Sbjct: 892  SYFLYSVLKRWIEIEALSRCDMMIRQETHCSFEYFRFVIPGSEIPEWFNNQSVGDTVTEK 951

Query: 376  RPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELEC--------SMDGSGEGHY 427
             P    N +K +GFA+C +  VP  +       S+   +  C         +D  G G  
Sbjct: 952  LPWDACN-SKWIGFAVCALI-VPHDNPSAVPEKSHLDPDTCCIWCFWNDYGIDVIGVG-- 1007

Query: 428  IYFRGKFGHVVSDHLWLLFLP---RHGHNWQFESNLIRLSFRSI-SDPTWKVKRCGFHPI 483
                     +VSDHL+LL LP   R   N+  E N +    R++ S+   KVK+CG   +
Sbjct: 1008 ---TNNVKQIVSDHLYLLVLPSPFRKPENY-LEVNFVFKIARAVGSNRGMKVKKCGVRAL 1063

Query: 484  YMHEVEEFDETTKQSTRFTSCNLNEVHHD-----FVGSNMEVAQASGSGS 528
            Y H+ EE      QS + +S +L E   D      V +  E A +   GS
Sbjct: 1064 YEHDTEELISKMNQS-KTSSISLYEEAMDEQEGAMVKATQEAATSRSGGS 1112



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 34/204 (16%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G T++ ++  SI LL  L +  L+ CK++ SLP  + +++ L T ++
Sbjct: 647 FTGIPNLEKLVLEGCTNLVKIHPSIALLKRLRIWNLRNCKSIRSLPSEV-NMEFLETFDV 705

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL-----------------PGLE 102
           SGCSKLK   + V  M+ LSKLYL GT++ ++PSSIE L                 P   
Sbjct: 706 SGCSKLKMISEFVMQMKRLSKLYLGGTAVEKLPSSIEHLSESLVVLDLSGIVIREQPYSR 765

Query: 103 LLYLNECKN------------LVRLPSSINGLKSLKTLNLSGC--CKLENVPDTLGKVES 148
           LL  N   +            L+ L +S+     L+TL L+ C  C+ E +P+ +G + S
Sbjct: 766 LLKQNLIASSFGLFPRKSPHPLIPLLASLKHFSCLRTLKLNDCNLCEGE-IPNDIGSLSS 824

Query: 149 LEELDVSGTAIRRPTSSIFLMKNL 172
           L+ L++ G       +SI L++++
Sbjct: 825 LQRLELRGNNFVSLPASIHLLEDV 848



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 33/146 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLT-GLELLTLKGC------------KNLSS---- 43
           +  MK LS LYL GT++ ++PSSIE L+  L +L L G             +NL +    
Sbjct: 718 VMQMKRLSKLYLGGTAVEKLPSSIEHLSESLVVLDLSGIVIREQPYSRLLKQNLIASSFG 777

Query: 44  ------------LPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAE 90
                       L  ++    CLRTL+L+ C+  + + P  + S+  L +L L G +   
Sbjct: 778 LFPRKSPHPLIPLLASLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLQRLELRGNNFVS 837

Query: 91  VPSSIELLPGLELLYLNECKNLVRLP 116
           +P+SI LL  ++   +  CK L +LP
Sbjct: 838 LPASIHLLEDVD---VENCKRLQQLP 860



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ ++  +I LL  L    L  CK++  LP  ++ +++L T ++SG S
Sbjct: 651 PNLEKLVLEGCTNLVKIHPSIALLKRLRIWNLRNCKSIRSLPSEVN-MEFLETFDVSGCS 709

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +   E      +L +++L GTA+  LP+SIE LS +++
Sbjct: 710 KLKMISEFVMQMKRLSKLYLGGTAVEKLPSSIEHLSESLV 749



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I  L  L +++LS        P+ T   + L ++ LEG T +  +  SI LL
Sbjct: 616 NIDHLWNGIKYLVNLKSIDLSYSINLTRTPDFTGIPN-LEKLVLEGCTNLVKIHPSIALL 674

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               + NL++CK+++SLPS +N +  L     SGCSKLK ++E + +++ L
Sbjct: 675 KRLRIWNLRNCKSIRSLPSEVN-MEFLETFDVSGCSKLKMISEFVMQMKRL 724


>gi|359495289|ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 165/491 (33%), Positives = 243/491 (49%), Gaps = 56/491 (11%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            ++K+L DL +  + I ++    ++L  L+ + LK  K L+  P   S +  L  L L GC
Sbjct: 636  NLKNLVDLSMPYSQIKQLWKGTKVLENLKFMNLKHSKFLTETP-DFSRVTNLERLVLKGC 694

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
              L K   +  S+ DL+KL                      L L  CK L  LPS I  L
Sbjct: 695  ISLYK---VHPSLGDLNKL--------------------NFLSLKNCKMLKSLPSCICDL 731

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            K L+   LSGC K E +P+  G +E L+E    GTAIR   SS  L++NL  L F  C  
Sbjct: 732  KCLEVFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFERCKG 791

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            PP S SW L        +SS     +L  L+ + SL  L LS C + + A    +  L S
Sbjct: 792  PPPSTSWWLP------RRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLSS 845

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            L++L L+ NNFVTLP++IS L +L+ L LE+CKRLQ+LP++P +++ + A  C+SL T+ 
Sbjct: 846  LEDLDLSENNFVTLPSNISRLPHLKMLGLENCKRLQALPELPTSIRSIMARNCTSLETI- 904

Query: 303  GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKW 362
                   S  +  + + +++L  K  +   + R+ L + A+S      ++VF GS+IP W
Sbjct: 905  -------SNQSFSSLLMTVRL--KEHIYCPINRDGLLVPALS------AVVF-GSRIPDW 948

Query: 363  FMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF----HSYPAHELECS 418
              YQ+ GS +    P   ++ N  +G A+C V  VP+  +    F     S        S
Sbjct: 949  IRYQSSGSEVKAELPPNWFDSN-FLGLALCVV-TVPRLVSLADFFGLFWRSCTLFYSTSS 1006

Query: 419  MDGSGEGHYIYFRGKFGHVVSDHLWLLFLP-RHGHNWQFESNLIRLSFRSISDPTWKV-K 476
               S    Y Y     G V SDHLWL+++P  H  NWQ +   I+ SFR  +     V K
Sbjct: 1007 HASSSFDVYTYPNHLKGKVESDHLWLVYVPLPHFINWQ-QVTHIKASFRITTFMRLNVIK 1065

Query: 477  RCGFHPIYMHE 487
             CG   +Y++E
Sbjct: 1066 ECGIGLVYVNE 1076



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 43/78 (55%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+L  CK L+ LP  I  LK L    LSG SKF E PE   + + L E   +GTAIR LP
Sbjct: 713 LSLKNCKMLKSLPSCICDLKCLEVFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLP 772

Query: 746 ASIELLSGNILSNLKDCK 763
           +S  LL    + + + CK
Sbjct: 773 SSFSLLRNLEILSFERCK 790


>gi|359493410|ref|XP_002279970.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1212

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 169/494 (34%), Positives = 236/494 (47%), Gaps = 57/494 (11%)

Query: 9    DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
            DLY  G S+  +P+       + L     C ++  L   I  L+ L+ ++LS    L + 
Sbjct: 672  DLY--GYSLKSLPNDFNAKNLVHLSM--PCSHIKQLWKGIKVLEKLKCMDLSHSKYLIET 727

Query: 69   PQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P + + + +L +L L D  S+ +V  S+  L  L  L    CK L  LPS    LKSL T
Sbjct: 728  PNL-SRVTNLERLVLEDCVSLCKVHPSLRDLKNLNFLSFKNCKMLKSLPSGPYDLKSLAT 786

Query: 128  LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
            L LSGC K E  P+  G +E L++L   GTA+R   SS+  ++NL  L F GC  PP SA
Sbjct: 787  LILSGCSKFEQFPENFGYLEMLKKLYADGTALRELPSSLSSLRNLEILSFVGCKGPP-SA 845

Query: 188  SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
            SW          +SS     +L +L+G+CSL KLDLSDC L +    S +  L SLK+LY
Sbjct: 846  SWLFP------RRSSNSTGFILHNLSGLCSLRKLDLSDCNLSDETNLSCLVYLSSLKDLY 899

Query: 248  LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
            L  NNFVTLP ++S L  LE   L +C RLQ LP +P ++  V A  C+SL  +  +L+ 
Sbjct: 900  LCENNFVTLP-NLSRLSRLERFRLANCTRLQELPDLPSSIVQVDARNCTSLKNV--SLRN 956

Query: 308  CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQN 367
             +S             L KN       R   +L  V      L I+ PGS++P W  YQ+
Sbjct: 957  VQS------------FLLKN-------RVIWDLNFVL----ALEILTPGSRLPDWIRYQS 993

Query: 368  EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD---GSGE 424
             G  +        +N N  +GF    V  VPK S        Y    L  S D   G   
Sbjct: 994  SGKEVIAELSPNWFNSN-FLGFGFANV--VPKFSNLGLSRFVYCYLSLSRSSDFTHGFRV 1050

Query: 425  GHYIYFRGKFGHVVS-DHLWLLFLPRH--------GH--NWQFESNLIRLSFRSISDPTW 473
              Y +F      +++ DH++LL++P          GH  NW  +   I+ SF+  SD   
Sbjct: 1051 VPYPHFLCLNRQMLTLDHVYLLYVPLSSFSDWCPWGHIINWH-QVTHIKASFQPRSDQFG 1109

Query: 474  KVKRCGFHPIYMHE 487
            +VKR G    Y +E
Sbjct: 1110 EVKRYGIGLAYSNE 1123



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 33/227 (14%)

Query: 596 CCINSMVSQAKAISQQGQFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEAD 655
           C I ++V+++  IS  G  ++M  +        ++ G + VR+Q  QE G  SRLW   D
Sbjct: 597 CGIRTLVNKS-LISIYGNKLEMHDL-------IQEMGIEIVRQQFVQELGKRSRLWFHED 648

Query: 656 EFPDIVQVLSDGTDIREL-SLAIELLFGLVQLTLNG----------------CKNLERLP 698
               I+ VL   T   ++  L +   F L   +L                  C ++++L 
Sbjct: 649 ----IIDVLKKNTGSEKIEGLFLSSYFDLYGYSLKSLPNDFNAKNLVHLSMPCSHIKQLW 704

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG--TAIRGLPASIELLSGNIL 756
           + I  L+ L  ++LS      E P + S    L  + LE   +  +  P+  +L + N L
Sbjct: 705 KGIKVLEKLKCMDLSHSKYLIETPNL-SRVTNLERLVLEDCVSLCKVHPSLRDLKNLNFL 763

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           S  K+CK LKSLPS    L+SL  +  SGCSK +   E  G +E L+
Sbjct: 764 S-FKNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFPENFGYLEMLK 809



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 55/101 (54%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL D   + ++  ++  L  L  L+   CK L+ LP     LK L+TL LSG SKF +FP
Sbjct: 740 VLEDCVSLCKVHPSLRDLKNLNFLSFKNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFP 799

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           E     + L +++ +GTA+R LP+S+  L    + +   CK
Sbjct: 800 ENFGYLEMLKKLYADGTALRELPSSLSSLRNLEILSFVGCK 840



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 22/172 (12%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----LPVTISSLKCLRTLELSGC 62
           L  LY DGT++ E+PSS+  L  LE+L+  GCK   S     P   S+        LSG 
Sbjct: 808 LKKLYADGTALRELPSSLSSLRNLEILSFVGCKGPPSASWLFPRRSSNSTGFILHNLSGL 867

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L+K      ++ D + L           S +  L  L+ LYL E  N V LP +++ L
Sbjct: 868 CSLRKLDLSDCNLSDETNL-----------SCLVYLSSLKDLYLCE-NNFVTLP-NLSRL 914

Query: 123 KSLKTLNLSGCCKLENVPD---TLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
             L+   L+ C +L+ +PD   ++ +V++     +   ++R   S  FL+KN
Sbjct: 915 SRLERFRLANCTRLQELPDLPSSIVQVDARNCTSLKNVSLRNVQS--FLLKN 964


>gi|399920218|gb|AFP55565.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1024

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 169/548 (30%), Positives = 243/548 (44%), Gaps = 130/548 (23%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G T++ E+  SI LL  L++   + CK++ SLP  + +++ L T ++
Sbjct: 596  FTGIPNLEKLVLEGCTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDV 654

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLK  P+ V  M+ LSKLYL+GT++ ++PSSIE L                     
Sbjct: 655  SGCSKLKIIPEFVGQMKRLSKLYLNGTAVEKLPSSIEHLS-------------------- 694

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                                       ESL ELD+SG  IR    S+FL +NL       
Sbjct: 695  ---------------------------ESLVELDLSGIVIREQPYSLFLKQNL------- 720

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                   +S+ L  P     KS  P+  +L SL    SL +L L+DC L E  IP+DI +
Sbjct: 721  -----VVSSFGL-FP----RKSPHPLIPLLASLKHFSSLMQLKLNDCNLCEGDIPNDIGS 770

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SL+ L L  NNFV+LPASI  L  L  + +E+CKRLQ LP++       R + C+SL 
Sbjct: 771  LSSLRRLELRGNNFVSLPASIHLLSKLRYINVENCKRLQQLPELSAIGVLSRTDNCTSLQ 830

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAV-SDPGHKLSIVFPGSQ 358
                 L     +   +NC+  +     + L  S+L+ ++E+Q     P   L  V PGS+
Sbjct: 831  LFPTGL-----RQNCVNCLSMVGNQDASYLLYSVLKRWIEIQETHRRPLEFLWFVIPGSE 885

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECS 418
            IP+WF  Q+ G  +T      L N          CV        G Y+            
Sbjct: 886  IPEWFNNQSVGDRVT---EKLLSN----------CV--------GVYV------------ 912

Query: 419  MDGSGEGHYIYFRGKFGHVVSDHLWLLFL--PRHGHNWQFESNLIRLSFRSISDPT-WKV 475
                              +VSDHL LL L  P        E N +    R++++    KV
Sbjct: 913  ----------------KQIVSDHLCLLILLSPFRKPENCLEVNFVFEITRAVANNRCIKV 956

Query: 476  KRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHD-----FVGSNMEVAQASGSGSSQ 530
            K+CG   +Y+H+ EE      QS   +S +L E   D      V +  E A  SGSG S 
Sbjct: 957  KKCGVRALYVHDREELISKMNQSKSSSSISLYEEAMDEQEGAMVKTTQEAA-TSGSGGSD 1015

Query: 531  WKWLKPVE 538
             ++    E
Sbjct: 1016 DEYYSAAE 1023



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 62/101 (61%), Gaps = 2/101 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++ +++ +G T++ E+  +I LL  L       CK+++ LP  ++ +++L T ++SG 
Sbjct: 599 IPNLEKLVLEGCTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGC 657

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           SK +  PE      +L +++L GTA+  LP+SIE LS +++
Sbjct: 658 SKLKIIPEFVGQMKRLSKLYLNGTAVEKLPSSIEHLSESLV 698



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 4/137 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I +L  L +++LS     R  P  T   + L ++ LEG T +  +  SI LL
Sbjct: 565 NIDHLWNGIKSLVNLKSIDLSYSRNLRRTPNFTGIPN-LEKLVLEGCTNLVEIHPSIALL 623

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWN 810
               + N ++CK++KSLPS +N +  L     SGCSKLK + E +G+++ L ++ L+   
Sbjct: 624 KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKIIPEFVGQMKRLSKLYLNGTA 682

Query: 811 RPKMQNDFDCVEQSAVE 827
             K+ +  + + +S VE
Sbjct: 683 VEKLPSSIEHLSESLVE 699


>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/411 (34%), Positives = 210/411 (51%), Gaps = 64/411 (15%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D  SI  +PSS++ L  L+ L+L GCK+L +LP ++ SL CL TLE+SGC  + +FP++ 
Sbjct: 752  DCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLPDSLLSLTCLETLEVSGCLNINEFPRLA 811

Query: 73   ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             ++E L    +  TSI EVP+ I  L  L  L ++  + L  LP SI+ L+SL+ L LSG
Sbjct: 812  KNIEVLR---ISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELRSLEKLKLSG 868

Query: 133  CCKLEN------------------------VPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
            CC LE+                        +P+ +G + +LE L    TAIRR   SI  
Sbjct: 869  CCVLESLPPEICQTMSCLRWLDLERTSIKELPENIGNLIALEVLQAGRTAIRRAPLSIAR 928

Query: 169  MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
            ++ L+ L     N    S   H          S CP   +   L  +C      LS+  +
Sbjct: 929  LERLQVLAIG--NSFYTSQGLH----------SLCPHLSIFNDLRALC------LSNMNM 970

Query: 229  GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP-QIPPNL 287
             E  IP+ I NL SL EL L+ NNF  +PASI  L  L  L++ +C+RLQ+LP  +P  L
Sbjct: 971  IE--IPNSIGNLWSLSELDLSGNNFEHIPASIRRLTRLSRLDVNNCQRLQALPDDLPRRL 1028

Query: 288  QFVRANGCSSLVTLFGALK-LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP 346
             ++ A+GC+SLV++ G  K  C  K    NC       + +  A  ++   ++L A + P
Sbjct: 1029 LYIYAHGCTSLVSISGCFKPCCLRKLVASNC------YKLDQEAQILIHRNMKLDA-AKP 1081

Query: 347  GHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV 397
             H     FPG  +P  F +Q  GSS+ + +PS     + ++GF+ C +  V
Sbjct: 1082 EHS---YFPGRDVPSCFNHQAMGSSLRIRQPS-----SDILGFSACIMIGV 1124



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 160/327 (48%), Gaps = 33/327 (10%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+TEV  SI+ L  L    L  C  L  +P  I+ LK L T+ ++GCS L  FP+   + 
Sbjct: 663 SLTEVTPSIKNLQKLYCFYLTNCTKLKKIPSGIA-LKSLETVGMNGCSSLMHFPEFSWNA 721

Query: 76  EDLSKLYLDGTSIAEVPSS-IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
               +LYL  T I E+PSS I  L  L  L +++C+++  LPSS+  L SLK+L+L+GC 
Sbjct: 722 R---RLYLSSTKIEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCK 778

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCNEPPA-----SA 187
            LEN+PD+L  +  LE L+VSG           L KN+  L  S    NE PA     S 
Sbjct: 779 HLENLPDSLLSLTCLETLEVSGCL--NINEFPRLAKNIEVLRISETSINEVPARICDLSQ 836

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
              L +  N   K S PV     S++ + SL KL LS C + E+  P     +  L+ L 
Sbjct: 837 LRSLDISGNEKLK-SLPV-----SISELRSLEKLKLSGCCVLESLPPEICQTMSCLRWLD 890

Query: 248 LNRNNFVTLPASISGLLNLEELELE---------DCKRLQSLPQIPPNLQFVRANGCSSL 298
           L R +   LP +I  L+ LE L+              RL+ L  +     F  + G  SL
Sbjct: 891 LERTSIKELPENIGNLIALEVLQAGRTAIRRAPLSIARLERLQVLAIGNSFYTSQGLHSL 950

Query: 299 ---VTLFGALK-LCRSKYTIINCIDSL 321
              +++F  L+ LC S   +I   +S+
Sbjct: 951 CPHLSIFNDLRALCLSNMNMIEIPNSI 977



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 113/252 (44%), Gaps = 34/252 (13%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            K++  L +  TSI EVP+ I  L+ L  L + G + L SLPV+IS L+ L  L+LSGC  
Sbjct: 812  KNIEVLRISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELRSLEKLKLSGCCV 871

Query: 65   LKKF-PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L+   P+I  +M  L  L L+ TSI E+P +I  L  LE+L       + R P SI  L+
Sbjct: 872  LESLPPEICQTMSCLRWLDLERTSIKELPENIGNLIALEVLQAGRTA-IRRAPLSIARLE 930

Query: 124  SLKTL-----------------------NLSGCC----KLENVPDTLGKVESLEELDVSG 156
             L+ L                       +L   C     +  +P+++G + SL ELD+SG
Sbjct: 931  RLQVLAIGNSFYTSQGLHSLCPHLSIFNDLRALCLSNMNMIEIPNSIGNLWSLSELDLSG 990

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLL--GKSSCPVALMLPSLTG 214
                   +SI  +  L  L  + C    A       LP  LL      C   + +     
Sbjct: 991  NNFEHIPASIRRLTRLSRLDVNNCQRLQALPD---DLPRRLLYIYAHGCTSLVSISGCFK 1047

Query: 215  VCSLTKLDLSDC 226
             C L KL  S+C
Sbjct: 1048 PCCLRKLVASNC 1059



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 3/129 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   IR L  +++ L  L  L+LNGCK+LE LP ++ +L  L TL +SG     EFP 
Sbjct: 750 MSDCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLPDSLLSLTCLETLEVSGCLNINEFPR 809

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +  + + L    +  T+I  +PA I  LS     ++   + LKSLP +I+ LRSL  +  
Sbjct: 810 LAKNIEVL---RISETSINEVPARICDLSQLRSLDISGNEKLKSLPVSISELRSLEKLKL 866

Query: 784 SGCSKLKNV 792
           SGC  L+++
Sbjct: 867 SGCCVLESL 875



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 24/184 (13%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA-----------IELL 680
           G Q +R+    +   C  L E     PD    LS  T++ EL+L+           I+ L
Sbjct: 623 GIQPLRKLKKMDLSRCKYLIE----IPD----LSKATNLEELNLSYCQSLTEVTPSIKNL 674

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
             L    L  C  L+++P  I ALK L T+ ++G S    FPE + +  +L   +L  T 
Sbjct: 675 QKLYCFYLTNCTKLKKIPSGI-ALKSLETVGMNGCSSLMHFPEFSWNARRL---YLSSTK 730

Query: 741 IRGLPAS-IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           I  LP+S I  LS  +  ++ DC+++++LPS++  L SL+ +  +GC  L+N+ ++L  +
Sbjct: 731 IEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLPDSLLSL 790

Query: 800 ESLE 803
             LE
Sbjct: 791 TCLE 794



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 28/243 (11%)

Query: 78  LSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
           L  L  DG  +  +PS       +EL   N   +L  L + I  L+ LK ++LS C  L 
Sbjct: 585 LRYLRWDGYPLNSLPSRFHPEFLVELFMSN--SHLHYLWNGIQPLRKLKKMDLSRCKYLI 642

Query: 138 NVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
            +PD L K  +LEEL++S   ++   T SI  ++ L   Y + C +     S        
Sbjct: 643 EIPD-LSKATNLEELNLSYCQSLTEVTPSIKNLQKLYCFYLTNCTKLKKIPSGIALKSLE 701

Query: 197 LLGKSSCPVALMLPS----------------------LTGVCSLTKLDLSDCGLGEAAIP 234
            +G + C   +  P                       ++ +  L +LD+SDC      +P
Sbjct: 702 TVGMNGCSSLMHFPEFSWNARRLYLSSTKIEELPSSMISRLSCLVELDMSDCQ-SIRTLP 760

Query: 235 SDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
           S + +L SLK L LN   +   LP S+  L  LE LE+  C  +   P++  N++ +R +
Sbjct: 761 SSVKHLVSLKSLSLNGCKHLENLPDSLLSLTCLETLEVSGCLNINEFPRLAKNIEVLRIS 820

Query: 294 GCS 296
             S
Sbjct: 821 ETS 823



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 6/147 (4%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG- 61
            +M  L  L L+ TSI E+P +I  L  LE+L   G   +   P++I+ L+ L+ L +   
Sbjct: 882  TMSCLRWLDLERTSIKELPENIGNLIALEVLQ-AGRTAIRRAPLSIARLERLQVLAIGNS 940

Query: 62   ---CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
                  L      ++   DL  L L   ++ E+P+SI  L  L  L L+   N   +P+S
Sbjct: 941  FYTSQGLHSLCPHLSIFNDLRALCLSNMNMIEIPNSIGNLWSLSELDLS-GNNFEHIPAS 999

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGK 145
            I  L  L  L+++ C +L+ +PD L +
Sbjct: 1000 IRRLTRLSRLDVNNCQRLQALPDDLPR 1026


>gi|225460287|ref|XP_002279207.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1554

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 215/439 (48%), Gaps = 46/439 (10%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L  T+I E+ + IE L+G++ L L+ CK L SLP  I  LK L T   SGCSKL+ FP
Sbjct: 1072 LCLGETAINELLN-IECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFP 1130

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I   M+ L +L LDGTS+ E+PSSI+ L GL+ L L  CKNL+ +P +I  L+SL+TL 
Sbjct: 1131 EITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLI 1190

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            +SGC KL  +P  LG +  L  L     A R  + S              C  P  S   
Sbjct: 1191 VSGCSKLNKLPKNLGSLTQLRLL----CAARLDSMS--------------CQLPSFSDLR 1232

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             L +  N L +S+     +   ++ + SL ++DLS C L E  IPS+I  L SL+ LYL 
Sbjct: 1233 FLKI-LN-LDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLK 1290

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             N+F ++P+ I  L  L+ L+L  C+ LQ +P++P +L+ + A+GC  +     +     
Sbjct: 1291 GNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLDAHGC--IRLESLSSPQSL 1348

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
               ++  C  S        L   M+   L LQ     G  + ++   S I +   +Q  G
Sbjct: 1349 LLSSLFKCFKS----EIQELECRMVLSSLLLQGFFYHGVNI-VISESSGILEGTWHQ--G 1401

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY 429
            S +T+  P   Y  N  +GFA+C  +    +                 S DG G+G+   
Sbjct: 1402 SQVTMELPWNWYENNNFLGFALCSAYSSLDNE----------------SEDGDGDGYPCT 1445

Query: 430  FRGKFGHVVSDHLWLLFLP 448
            F+       S+  W   LP
Sbjct: 1446 FKCCLTFWASESGWQCELP 1464



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 227/541 (41%), Gaps = 103/541 (19%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            +L  L+ DG S+  +P +      +EL  L+ C N+  L      LK L+ + L+   +L
Sbjct: 599  ELRYLHWDGYSLKYLPPNFHPKNLVEL-NLR-CSNIKQLWEGNKVLKKLKVINLNHSQRL 656

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
             +FP                        S  ++P LE+L L  C +L RLP  I+ L+ L
Sbjct: 657  MEFP------------------------SFSMMPNLEILTLEGCISLKRLPMDIDRLQHL 692

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSI------------------ 166
            +TL+   C KLE  P+    +++L++LD+ GTAI + P+SSI                  
Sbjct: 693  QTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLV 752

Query: 167  -----FLMKNLRSLYFSG-CNEPPASASWHLHLPFNLLGKSSCPVAL-MLPSLTGVCSLT 219
                   + +LR L+ +G C  P    S         L  S C V    L  +  + SL 
Sbjct: 753  ILPENICLSSLRVLHLNGSCITPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLK 812

Query: 220  KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
            +LDLS+C L +  IP DI  L SL+ L L+  N   +PASI  L  L+ L L  CK+LQ 
Sbjct: 813  ELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQG 872

Query: 280  LPQIPPNLQFVRANGCSSLVT----LFGALKLC-RSKYTIINCIDSLKLLRKNGLAISML 334
              ++P +++F+  +     ++    L+G L  C +S+   + C        + G      
Sbjct: 873  SLKLPSSVRFLDGHDSFKSLSWQRWLWGFLFNCFKSEIQDVEC--------RGGW----- 919

Query: 335  REYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
               ++       G  +SIV P  ++P W  YQN G+ I +  P   Y  N  +GFA+C V
Sbjct: 920  -HDIQFGQSGFFGKGISIVIP--RMPHWISYQNVGNEIKIELPMDWYEDNDFLGFALCAV 976

Query: 395  FQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNW 454
            + VP  +T        P           GE              S+ +W+   P+     
Sbjct: 977  Y-VPLENT----LGDVPT---------IGES-------------SNQVWMTCYPQIAIQE 1009

Query: 455  QFESNLIR---LSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHH 511
            +  SN  R    SF      ++KV +CG   IY  + +        S   + C  N  H 
Sbjct: 1010 KHRSNKWRQFAASFVGYVTGSFKVIKCGVTLIYEQKSKLLGSVENVSVTCSECQTNGEHE 1069

Query: 512  D 512
            +
Sbjct: 1070 E 1070



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 1/137 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I EL L IE L G+  L L  CK LE LP  I  LK L+T + SG SK + FPEIT  
Sbjct: 1077 TAINEL-LNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITED 1135

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
               L E+ L+GT+++ LP+SI+ L G    +L++CKNL ++P  I  LRSL  +  SGCS
Sbjct: 1136 MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 1195

Query: 788  KLKNVTETLGKVESLEV 804
            KL  + + LG +  L +
Sbjct: 1196 KLNKLPKNLGSLTQLRL 1212



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 9/183 (4%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            MK L +L LDGTS+ E+PSSI+ L GL+ L L+ CKNL ++P  I +L+ L TL +SGCS
Sbjct: 1136 MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 1195

Query: 64   KLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--LPSS 118
            KL K P+ + S+  L  L    LD  S  ++PS  + L  L++L L+   NLV   + S 
Sbjct: 1196 KLNKLPKNLGSLTQLRLLCAARLDSMS-CQLPSFSD-LRFLKILNLDR-SNLVHGAIRSD 1252

Query: 119  INGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            I+ L SL+ ++LS C   E  +P  +  + SL+ L + G       S I  +  L+ L  
Sbjct: 1253 ISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDL 1312

Query: 178  SGC 180
            S C
Sbjct: 1313 SHC 1315



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 60/101 (59%), Gaps = 2/101 (1%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC +L+RLP  I  L++L TL+    SK   FPEI  +   L ++ L GTAI  LP
Sbjct: 671 LTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIEKLP 730

Query: 746 -ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            +SIE L G    NL  CKNL  LP  I  L SLR+++ +G
Sbjct: 731 SSSIEHLEGLEYLNLAHCKNLVILPENI-CLSSLRVLHLNG 770



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 55/182 (30%)

Query: 3   SMKDLSDLYLDGTSITEVPSS-IELLTGLELLTLKGCKNLSSLP--VTISSLKC------ 53
           +MK+L  L L GT+I ++PSS IE L GLE L L  CKNL  LP  + +SSL+       
Sbjct: 712 TMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICLSSLRVLHLNGS 771

Query: 54  ---------------------------------------LRTLELSGCSKLKK-FPQIVA 73
                                                  L+ L+LS C  +K+  P  + 
Sbjct: 772 CITPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIY 831

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL---VRLPSSI---NGLKSLKT 127
            +  L  L L GT+I ++P+SI  L  L+ L+L  CK L   ++LPSS+   +G  S K+
Sbjct: 832 RLSSLQALDLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFLDGHDSFKS 891

Query: 128 LN 129
           L+
Sbjct: 892 LS 893



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L      FP+I + +        DGT ++EL  +I+ L GL  L L  CKNL  +P 
Sbjct: 1123 CSKL----QSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPD 1178

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
             I  L+ L TL +SG SK  + P+   S  QL
Sbjct: 1179 NICNLRSLETLIVSGCSKLNKLPKNLGSLTQL 1210


>gi|297734815|emb|CBI17049.3| unnamed protein product [Vitis vinifera]
          Length = 1651

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 246/497 (49%), Gaps = 61/497 (12%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G +I+ +P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 1186 LCLKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFP 1243

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I+ +ME+L +L+L+ T+I E+PSSIE L  LE+L L+ C+NLV LP SI  L  L+ LN
Sbjct: 1244 EILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLVTLPESICNLCFLEVLN 1303

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
            +S C KL  +P  LG+++SL+ L   G           S +  +KNL             
Sbjct: 1304 VSYCSKLHKLPQNLGRLQSLKHLRACGLNSTCCQLLSLSGLCSLKNL------------- 1350

Query: 186  SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
                       +L  S      +L  +  + SL  LDLS C + E  IP++I +L SL++
Sbjct: 1351 -----------ILTGSKLIQGEILSDICCLYSLEVLDLSFCSIDEGGIPTEICHLSSLRQ 1399

Query: 246  LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL 305
            L L  N F ++P+ ++ L  L  L+L  C+ L+ +P +P +L+ +  + C+ L T  G L
Sbjct: 1400 LLLTGNLFRSIPSGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHECTRLETSSGLL 1459

Query: 306  KLCRSKYTIINCIDSLKLLRKNGLAISMLREY-LELQAVSDPGHKLSIVFPGS-QIPKWF 363
                   ++ NC  SL            ++++   +    +   ++ ++  GS  IPKW 
Sbjct: 1460 -----WSSLFNCFKSL------------IQDFECRIYPRENRFARVHLIISGSCGIPKWI 1502

Query: 364  MYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD-GS 422
             +  +G+ +    P   Y  N ++GF +  ++  P  +       +Y A  L+C +   +
Sbjct: 1503 SHHKKGAKVVAELPENWYKNNDLLGFVLYSLYD-PLDNESEETLENY-ATSLKCGLTLRA 1560

Query: 423  GEGHYI----YFRGKFGHVVSDHLWLLFLPR----HGHNWQFESNLIRLSFRS-ISDPTW 473
             E  ++    ++     + V  ++W+++ P+      H+ +     +  SF   +     
Sbjct: 1561 HESQFVDELRFYPTFHCYDVVPNMWMIYYPKVEIEKYHSNKRRWRQLTASFCGFLCGKAM 1620

Query: 474  KVKRCGFHPIYMHEVEE 490
            KV+ CG H IY H+ E+
Sbjct: 1621 KVEECGIHLIYAHDHEK 1637



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 244/492 (49%), Gaps = 52/492 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G  I+ +P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 276 LCLKGQPISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFP 333

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           +I+ +ME+L +L+L+ T+I E+PSSIE L  LE+L L  CK LV LP SI  L  L+ L+
Sbjct: 334 EILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLD 393

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
           +S C KL  +P  LG+++SL+ L   G  +      S+  + +L++L   G         
Sbjct: 394 VSYCSKLHKLPQNLGRLQSLKHLCACGLNSTCCQLVSLLGLCSLKNLILPG--------- 444

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                       S     ++L  +  + SL  LDLS C + E  IP++I +L SL+ L+L
Sbjct: 445 ------------SKLMQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSSLQHLHL 492

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
           + N F ++P+ ++ L  L  L L  C+ L+ +P +P +L+ +  + C  L T  G L   
Sbjct: 493 SGNLFRSIPSGVNQLSMLRILNLGHCQELRQIPALPSSLRVLDVHECPWLETSSGLL--- 549

Query: 309 RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS-QIPKWFMYQN 367
               ++ NC  SL       +     R Y      +    +++++  GS  IPKW  +  
Sbjct: 550 --WSSLFNCFKSL-------IQDFECRIYPRDSLFA----RVNLIISGSCGIPKWISHHK 596

Query: 368 EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD-GSGEGH 426
           +G+ +    P   Y  N ++GF +  ++    + +   L +   A  L+CS+   + E  
Sbjct: 597 KGAKVVAKLPENWYKNNDLLGFVLYSLYDPLDNESEETLEND--AAYLKCSLTLRAHESQ 654

Query: 427 YI----YFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIR---LSFRSISD-PTWKVKRC 478
           ++    ++     + V   +W+++  +     ++ SN  R    SF   S     KV+ C
Sbjct: 655 FVDELQFYPSFRCYDVVPKMWMIYYAKVVIEKKYHSNKWRQLTASFCGFSHGKAMKVEEC 714

Query: 479 GFHPIYMHEVEE 490
           G H IY H+ E+
Sbjct: 715 GIHLIYAHDHEK 726



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 208/452 (46%), Gaps = 75/452 (16%)

Query: 73   ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
            A ++   KL L G++I E+P+ IE     + L L ECKNL RLPSSI  LKSL TLN SG
Sbjct: 742  ADVQSRRKLCLKGSAINELPT-IECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSG 800

Query: 133  CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
            C +L + P+ L  VE+L  L + GTAI+   +SI  ++ L+ L  + C            
Sbjct: 801  CSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCT----------- 849

Query: 193  LPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY---- 247
               NL+          LP ++  + SL  LD+S C   E   P ++ +L  L+ L+    
Sbjct: 850  ---NLVS---------LPETICNLSSLKILDVSFCTKLEE-FPKNLRSLQCLECLHASGL 896

Query: 248  -LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
             L+ + F ++ A I  L  L  +EL  C+    +P++ P+L+ +  + C+ L TL     
Sbjct: 897  NLSMDCFSSILAGIIQLSKLRVVELSHCQGPLQVPELTPSLRVLDVHSCTCLETLSSPSS 956

Query: 307  LCRSKYTIINC----IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPK 361
            L     ++  C    I+ LK  + +        +Y+        G  + IV PGS  IPK
Sbjct: 957  L--LGVSLFKCFKSTIEDLKHEKSSNGVFLPNSDYI--------GDGICIVVPGSSGIPK 1006

Query: 362  WFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-------QVPKHSTGTYL-------- 406
            W   Q EG  IT+  P   Y  +  +G AICCV+        +P++     L        
Sbjct: 1007 WIRNQREGYRITMELPQNCYENDDFLGIAICCVYAPLDECEDIPENDFAHTLENESDDLL 1066

Query: 407  -FHSYPAHELECSM---DGSGEG----HYIYFRG--KFGHV--VSDHLWLLFLPRHGHNW 454
               S  + EL+C +   +G G       ++ FR   K  H   VS+ +W++F P+     
Sbjct: 1067 EAESSISTELQCQLSLSEGYGSSSLCVRHLSFRSTCKCYHNGGVSEQMWVIFYPKAAILE 1126

Query: 455  QFESNLIRLSFRSISDPT--WKVKRCGFHPIY 484
               +N       +  DP   +KV +CG  PIY
Sbjct: 1127 SGPTNPFMYLAATFKDPQSHFKVLKCGLQPIY 1158



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 109/187 (58%), Gaps = 6/187 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           A ++    L L G++I E+P+ IE     + L L+ CKNL  LP +I  LK L TL  SG
Sbjct: 742 ADVQSRRKLCLKGSAINELPT-IECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSG 800

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CS+L+ FP+I+  +E+L  L+LDGT+I E+P+SI+ L GL+ L L +C NLV LP +I  
Sbjct: 801 CSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLVSLPETICN 860

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS-----IFLMKNLRSLY 176
           L SLK L++S C KLE  P  L  ++ LE L  SG  +     S     I  +  LR + 
Sbjct: 861 LSSLKILDVSFCTKLEEFPKNLRSLQCLECLHASGLNLSMDCFSSILAGIIQLSKLRVVE 920

Query: 177 FSGCNEP 183
            S C  P
Sbjct: 921 LSHCQGP 927



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/137 (48%), Positives = 83/137 (60%), Gaps = 1/137 (0%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+ I EL   IE       L L  CKNLERLP +I  LK L+TLN SG S+ R FPEI  
Sbjct: 754 GSAINELP-TIECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSFPEILE 812

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
             + L  +HL+GTAI+ LPASI+ L G    NL DC NL SLP TI  L SL+++  S C
Sbjct: 813 DVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLVSLPETICNLSSLKILDVSFC 872

Query: 787 SKLKNVTETLGKVESLE 803
           +KL+   + L  ++ LE
Sbjct: 873 TKLEEFPKNLRSLQCLE 889



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 4/170 (2%)

Query: 675  LAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
            L IE       L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L E+
Sbjct: 1196 LPIEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLREL 1255

Query: 735  HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            HL  TAI+ LP+SIE L+   + NL  C+NL +LP +I  L  L ++  S CSKL  + +
Sbjct: 1256 HLNETAIKELPSSIEHLNRLEVLNLDRCENLVTLPESICNLCFLEVLNVSYCSKLHKLPQ 1315

Query: 795  TLGKVESLE-VRLSSWNRPKMQ---NDFDCVEQSAVETVTKLAKAELLRD 840
             LG+++SL+ +R    N    Q       C  ++ + T +KL + E+L D
Sbjct: 1316 NLGRLQSLKHLRACGLNSTCCQLLSLSGLCSLKNLILTGSKLIQGEILSD 1365



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 76/129 (58%)

Query: 675 LAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           L IE       L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L E+
Sbjct: 286 LPIEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLREL 345

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           HL  TAI+ LP+SIE L+   + NL+ CK L +LP +I  L  L ++  S CSKL  + +
Sbjct: 346 HLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLDVSYCSKLHKLPQ 405

Query: 795 TLGKVESLE 803
            LG+++SL+
Sbjct: 406 NLGRLQSLK 414



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 19/193 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M++L +L+L+ T+I E+PSSIE L  LE+L L+GCK L +LP +I +L  L  L++S
Sbjct: 336 LENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLDVS 395

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP---- 116
            CSKL K PQ +  ++ L  L   G +     +  +L   + LL L   KNL+ LP    
Sbjct: 396 YCSKLHKLPQNLGRLQSLKHLCACGLN----STCCQL---VSLLGLCSLKNLI-LPGSKL 447

Query: 117 ------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
                 S I  L SL+ L+LS C   E  +P  +  + SL+ L +SG   R   S +  +
Sbjct: 448 MQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSSLQHLHLSGNLFRSIPSGVNQL 507

Query: 170 KNLRSLYFSGCNE 182
             LR L    C E
Sbjct: 508 SMLRILNLGHCQE 520



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 88/144 (61%), Gaps = 8/144 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+LDGT+I E+P+SI+ L GL+ L L  C NL SLP TI +L  L+ L++S
Sbjct: 811 LEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLVSLPETICNLSSLKILDVS 870

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSI-----AEVPSSIELLPGLELLYLNECKNLVRL 115
            C+KL++FP+ + S++ L  L+  G ++     + + + I  L  L ++ L+ C+  +++
Sbjct: 871 FCTKLEEFPKNLRSLQCLECLHASGLNLSMDCFSSILAGIIQLSKLRVVELSHCQGPLQV 930

Query: 116 PSSINGLKSLKTLNLSGCCKLENV 139
           P       SL+ L++  C  LE +
Sbjct: 931 PELT---PSLRVLDVHSCTCLETL 951



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 3/185 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +M++L +L+L+ T+I E+PSSIE L  LE+L L  C+NL +LP +I +L  L  L +S
Sbjct: 1246 LENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLVTLPESICNLCFLEVLNVS 1305

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDG--TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CSKL K PQ +  ++ L  L   G  ++  ++ S   L     L+          + S 
Sbjct: 1306 YCSKLHKLPQNLGRLQSLKHLRACGLNSTCCQLLSLSGLCSLKNLILTGSKLIQGEILSD 1365

Query: 119  INGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            I  L SL+ L+LS C   E  +P  +  + SL +L ++G   R   S +  +  LR L  
Sbjct: 1366 ICCLYSLEVLDLSFCSIDEGGIPTEICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRLLDL 1425

Query: 178  SGCNE 182
              C E
Sbjct: 1426 GHCQE 1430



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 64/144 (44%), Gaps = 16/144 (11%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CSRL      FP+I++ +        DGT I+EL  +I+ L GL  L L  C NL  LP 
Sbjct: 801 CSRL----RSFPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLVSLPE 856

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-----TAIRGLPASIELLSGN 754
           TI  L  L  L++S  +K  EFP+   S   L  +H  G          + A I  LS  
Sbjct: 857 TICNLSSLKILDVSFCTKLEEFPKNLRSLQCLECLHASGLNLSMDCFSSILAGIIQLSKL 916

Query: 755 ILSNLKDCKNLKSLPSTINGLRSL 778
            +  L  C+    +P     LR L
Sbjct: 917 RVVELSHCQGPLQVPELTPSLRVL 940



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 73/197 (37%), Gaps = 50/197 (25%)

Query: 350 LSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGT---Y 405
           + IV PGS  IPKW   Q EG  IT+  P   Y  +  +G AIC V+        T   Y
Sbjct: 77  ICIVVPGSSGIPKWIRNQTEGYHITMGLPQNCYENDDFLGIAICSVYAPIYECEDTPENY 136

Query: 406 LFH---------------------SYPAHELECSM---DGSGEGHYIYFRGKFGHV---- 437
             H                     S  + +L+C +   +G G          F       
Sbjct: 137 FAHTLENPSGDEVLNEDDDLLEAESSISTKLQCQLSLSEGYGSSSLCVRHLSFCSTCKCY 196

Query: 438 ----VSDHLWLLFLPRHG-----HNWQF-ESNLIRLSFRSISDPTWKVKRCGFHPIYMH- 486
               VS  +W++F P+       H  +F   N + +  R+     +KV +CG  PIY   
Sbjct: 197 HNGGVSGQMWVIFYPKAAILESCHTNRFMHLNAVFIDSRN----HFKVLKCGLQPIYSQD 252

Query: 487 ---EVEEFDETTKQSTR 500
              + E+ D +  +  R
Sbjct: 253 PIVQTEDVDASCLECQR 269



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 11/85 (12%)

Query: 646 NCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           +CS+L      FP+I++ + +        T I+EL  +IE L  L  L L GCK L  LP
Sbjct: 325 HCSQL----QYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLP 380

Query: 699 RTISALKYLSTLNLSGLSKFREFPE 723
            +I  L +L  L++S  SK  + P+
Sbjct: 381 ESICNLCFLEVLDVSYCSKLHKLPQ 405



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 11/85 (12%)

Query: 646  NCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
            +CS+L      FP+I++ + +        T I+EL  +IE L  L  L L+ C+NL  LP
Sbjct: 1235 HCSQL----QYFPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLVTLP 1290

Query: 699  RTISALKYLSTLNLSGLSKFREFPE 723
             +I  L +L  LN+S  SK  + P+
Sbjct: 1291 ESICNLCFLEVLNVSYCSKLHKLPQ 1315


>gi|359493227|ref|XP_002264747.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1536

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 161/494 (32%), Positives = 234/494 (47%), Gaps = 101/494 (20%)

Query: 12   LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
             + + + E+P  IE    L+ L L+GCK L SLP +I   K L TL   GCS+L+ FP+I
Sbjct: 1071 FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1129

Query: 72   VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            +  ME L KL L G++I E+PSSI+ L GL+ L L  CKNLV LP SI  L SLKTL + 
Sbjct: 1130 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1189

Query: 132  GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             C +L+ +P+ LG+++SLE               I  +K+  S+                
Sbjct: 1190 SCPELKKLPENLGRLQSLE---------------ILYVKDFDSM---------------- 1218

Query: 192  HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                      +C      PSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N
Sbjct: 1219 ----------NC----QFPSLSGLCSLRILRLINCGLRE--IPSGICHLTSLQCLVLMGN 1262

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
             F ++P  IS L  L  L L  CK LQ +P+ P NL+ + A+ C+SL     +  L  S 
Sbjct: 1263 QFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTLVAHQCTSLKI---SSSLLWSP 1319

Query: 312  YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGS 370
            +             K+G           +Q     G  L    P S  IP+W  +Q +GS
Sbjct: 1320 FF------------KSG-----------IQKFVPRGKVLDTFIPESNGIPEWISHQKKGS 1356

Query: 371  SITVTRPSYLYNVNKVVGFAICCVFQVP-----------KHSTGTYLFHSYPAHELECSM 419
             IT+T P   Y  +  +GFA+C +  VP           ++      F++ P+  +    
Sbjct: 1357 KITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNFICKLNFNNNPSLVVR--- 1412

Query: 420  DGSGEGHYIYFRGKFGHVVSDHLWLL-----FLPRHGHNWQFESNLIRLSFRSISD-PTW 473
            D     H    R       S+ LWL+      +P   H+ ++ +  +  SF++  D  + 
Sbjct: 1413 DIQSRRHCQSCRDG---DESNQLWLIKIAKSMIPNIYHSNKYRT--LNASFKNDFDTKSV 1467

Query: 474  KVKRCGFHPIYMHE 487
            KV+RCGF  +Y  +
Sbjct: 1468 KVERCGFQLLYAQD 1481



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 158/321 (49%), Gaps = 58/321 (18%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           + E+P     +P LE+L L  C  L  LP  I   K L+TL+   C KL+  P+  G + 
Sbjct: 628 LTEIPD-FSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMR 686

Query: 148 SLEELDVSGTAIRR-PTSSIF-LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
            L ELD+SGTAI   P+SS F  +K L+ L F GC++             N +    C +
Sbjct: 687 KLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSK------------LNKIPTDVCCL 734

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
           +          SL  LDLS C + E  IPSDI  L SLKEL L  N+F ++PA+I+ L  
Sbjct: 735 S----------SLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINRLSR 784

Query: 266 LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
           L+ L L  C+ L+ +P++P +L+ + A+G +  ++    L      ++++NC +S     
Sbjct: 785 LQVLNLSHCQNLEHIPELPSSLRLLDAHGPNLTLSTASFLPF----HSLVNCFNS----- 835

Query: 326 KNGLAISMLREYLELQAVSD-------PGHKLSIVFPG-SQIPKWFMYQNEGSSITVTRP 377
                     E  +L   S         G+ + IV PG S +P+W M +       +  P
Sbjct: 836 ----------EIQDLNQCSQNCNDSAYHGNGICIVLPGHSGVPEWMMGRR-----AIELP 880

Query: 378 SYLYNVNKVVGFAICCVFQVP 398
              +  N+ +GFAICCV+ VP
Sbjct: 881 QNWHQDNEFLGFAICCVY-VP 900



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 94/167 (56%), Gaps = 4/167 (2%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +TE+P     +  LE+LTLKGC  L  LP  I   K L+TL    CSKLK+FP+I  +M 
Sbjct: 628 LTEIPD-FSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMR 686

Query: 77  DLSKLYLDGTSIAEVPSSIEL--LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            L +L L GT+I E+PSS     L  L++L    C  L ++P+ +  L SL+ L+LS C 
Sbjct: 687 KLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCN 746

Query: 135 KLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            +E  +P  + ++ SL+EL++     R   ++I  +  L+ L  S C
Sbjct: 747 IMEGGIPSDICRLSSLKELNLKSNDFRSIPATINRLSRLQVLNLSHC 793



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            + +D++EL + IE    L  L L GCK L+ LP +I   K L+TL   G S+   FPEI 
Sbjct: 1072 EDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEIL 1130

Query: 726  SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
               + L ++ L G+AI+ +P+SI+ L G    NL  CKNL +LP +I  L SL+ +    
Sbjct: 1131 EDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKS 1190

Query: 786  CSKLKNVTETLGKVESLEV 804
            C +LK + E LG+++SLE+
Sbjct: 1191 CPELKKLPENLGRLQSLEI 1209



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L L G++I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+TL + 
Sbjct: 1130 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1189

Query: 61   GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C +LKK P+ +  ++ L  LY+ D  S+     S+  L  L +L L  C  L  +PS I
Sbjct: 1190 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINC-GLREIPSGI 1248

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSL 175
              L SL+ L L G  +  ++PD + ++  L  L++S       I  P S      NLR+L
Sbjct: 1249 CHLTSLQCLVLMG-NQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPS------NLRTL 1301

Query: 176  YFSGCNEPPASAS 188
                C     S+S
Sbjct: 1302 VAHQCTSLKISSS 1314



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 83/157 (52%), Gaps = 15/157 (9%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC  LE LPR I   K+L TL+    SK + FPEI  +  +L E+ L GTAI  LP
Sbjct: 643 LTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELP 702

Query: 746 ASI---ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +S     L +  ILS  + C  L  +P+ +  L SL ++  S C    N+ E  G + S 
Sbjct: 703 SSSSFGHLKALKILS-FRGCSKLNKIPTDVCCLSSLEVLDLSYC----NIME--GGIPSD 755

Query: 803 EVRLSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELL 838
             RLSS     ++ NDF    +S   T+ +L++ ++L
Sbjct: 756 ICRLSSLKELNLKSNDF----RSIPATINRLSRLQVL 788



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIEL--LTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +M+ L +L L GT+I E+PSS     L  L++L+ +GC  L+ +P  +  L  L  L+L
Sbjct: 683 GNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDL 742

Query: 60  SGCSKLKK-FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C+ ++   P  +  +  L +L L       +P++I  L  L++L L+ C+NL  +P  
Sbjct: 743 SYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINRLSRLQVLNLSHCQNLEHIPEL 802

Query: 119 INGLKSL 125
            + L+ L
Sbjct: 803 PSSLRLL 809



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 20/153 (13%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSL---AIELL-----FGLVQ----LTLNGCK 692
           G+CS+L      FP+I     +   +REL L   AIE L     FG ++    L+  GC 
Sbjct: 670 GDCSKL----KRFPEIK---GNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCS 722

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFRE-FPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
            L ++P  +  L  L  L+LS  +      P        L E++L+    R +PA+I  L
Sbjct: 723 KLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINRL 782

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
           S   + NL  C+NL+ +P   + LR L    P+
Sbjct: 783 SRLQVLNLSHCQNLEHIPELPSSLRLLDAHGPN 815



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 40/189 (21%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I++ +         G+ I+E+  +I+ L GL  L L  CKNL  LP 
Sbjct: 1120 CSQL----ESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPE 1175

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI------------------------- 734
            +I  L  L TL +    + ++ PE    R Q LEI                         
Sbjct: 1176 SICNLTSLKTLTIKSCPELKKLPE-NLGRLQSLEILYVKDFDSMNCQFPSLSGLCSLRIL 1234

Query: 735  HLEGTAIRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
             L    +R +P+ I  L S   L  + +     S+P  I+ L  L ++  S C  L+++ 
Sbjct: 1235 RLINCGLREIPSGICHLTSLQCLVLMGN--QFSSIPDGISQLHKLIVLNLSHCKLLQHIP 1292

Query: 794  ETLGKVESL 802
            E    + +L
Sbjct: 1293 EPPSNLRTL 1301


>gi|399920201|gb|AFP55548.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1115

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 162/503 (32%), Positives = 238/503 (47%), Gaps = 94/503 (18%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G T++ +V  SI LL  L++   + CK++ SLP  + +++ L T ++
Sbjct: 646  FTGIPNLEKLVLEGCTNLVKVHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDV 704

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLK  P+ V  M+ LSKL L GT+I ++PSSIE L                     
Sbjct: 705  SGCSKLKMIPEFVGQMKRLSKLSLGGTAIEKLPSSIEHLS-------------------- 744

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                                       ESL ELD+SG  IR    S FL +NL       
Sbjct: 745  ---------------------------ESLVELDLSGLVIREQPYSRFLKQNL------- 770

Query: 180  CNEPPASASWHLHLPFNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                       +   F L   K   P+  +L SL    SLT L+L+DC L E  IP+DI 
Sbjct: 771  -----------IASSFGLFPRKRPHPLVPLLASLKHFSSLTTLNLNDCNLCEGEIPNDIG 819

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-VRANGCSS 297
            +L SL+ L L  NNFV+L ASI  L  L+ + +E+C+RLQ LP++P +    V  + C+S
Sbjct: 820  SLSSLESLELRGNNFVSLSASIHLLSKLKHINVENCRRLQQLPELPASDYLRVVTDNCTS 879

Query: 298  LVTLFGALKLCR---SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF 354
            L        LCR    ++  +NC+ ++     +    S+L+  LE    S        V 
Sbjct: 880  LQMFPDPQDLCRIGNFEFNCVNCLSTVGNQDASYFLYSVLKRLLEETHRS--SEYFRFVI 937

Query: 355  PGSQIPKWFMYQNEGSSITVTRPS-YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
            PGS+IP+WF  Q+ G S+T   PS Y++     +GFA+C +   P + +        P  
Sbjct: 938  PGSEIPEWFNNQSVGDSVTEKLPSDYMW-----IGFAVCALIVPPDNPSAV------PEK 986

Query: 414  -ELECSM-DGSGEGHY-IYFRGK---FGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRS 467
              L C    GS   H  +  RG       +VSDHL+LL L +  +  +   N  +  F S
Sbjct: 987  ISLRCRWPKGSPWTHSGVPSRGACFVVKQIVSDHLFLLVLRKPENYLEDTCNEAKFDF-S 1045

Query: 468  ISDPTWKVKRCGFHPIYMHEVEE 490
            I++   KVK+CG    Y H+++E
Sbjct: 1046 INNCI-KVKKCGARAFYQHDMDE 1067



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG S
Sbjct: 650 PNLEKLVLEGCTNLVKVHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCS 708

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE      +L ++ L GTAI  LP+SIE LS +++
Sbjct: 709 KLKMIPEFVGQMKRLSKLSLGGTAIEKLPSSIEHLSESLV 748



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I   + L ++NLS        P+ T   + L ++ LEG T +  +  SI LL
Sbjct: 615 NIDHLWNGIKYSRNLKSINLSYSINLTRTPDFTGIPN-LEKLVLEGCTNLVKVHPSIALL 673

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               + N ++CK++KSLPS +N +  L     SGCSKLK + E +G+++ L
Sbjct: 674 KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQMKRL 723


>gi|296081088|emb|CBI18282.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 228/494 (46%), Gaps = 101/494 (20%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
            + + + E+P  IE    L+ L L+GCK L SLP +I   K L TL   GCS+L+ FP+I
Sbjct: 245 FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 303

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           +  ME L KL L G++I E+PSSI+ L GL+ L L  CKNLV LP SI  L SLKTL + 
Sbjct: 304 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 363

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            C +L+ +P+ LG+++SLE               I  +K+  S+                
Sbjct: 364 SCPELKKLPENLGRLQSLE---------------ILYVKDFDSM---------------- 392

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                             PSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N
Sbjct: 393 --------------NCQFPSLSGLCSLRILRLINCGLRE--IPSGICHLTSLQCLVLMGN 436

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
            F ++P  IS L  L  L L  CK LQ +P+ P NL+ + A+ C+SL      L      
Sbjct: 437 QFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLRTLVAHQCTSLKISSSLL------ 490

Query: 312 YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGS 370
                         K+G           +Q     G  L    P S  IP+W  +Q +GS
Sbjct: 491 ---------WSPFFKSG-----------IQKFVPRGKVLDTFIPESNGIPEWISHQKKGS 530

Query: 371 SITVTRPSYLYNVNKVVGFAICCVFQVP-----------KHSTGTYLFHSYPAHELECSM 419
            IT+T P   Y  +  +GFA+ C   VP           ++      F++ P+  +    
Sbjct: 531 KITLTLPQNWYENDDFLGFAL-CSLHVPLDIEWRDIDESRNFICKLNFNNNPSLVVR--- 586

Query: 420 DGSGEGHYIYFRGKFGHVVSDHLWLL-----FLPRHGHNWQFESNLIRLSFRSISD-PTW 473
           D     H    R       S+ LWL+      +P   H+ ++ +  +  SF++  D  + 
Sbjct: 587 DIQSRRHCQSCRDG---DESNQLWLIKIAKSMIPNIYHSNKYRT--LNASFKNDFDTKSV 641

Query: 474 KVKRCGFHPIYMHE 487
           KV+RCGF  +Y  +
Sbjct: 642 KVERCGFQLLYAQD 655



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           + +D++EL + IE    L  L L GCK L+ LP +I   K L+TL   G S+   FPEI 
Sbjct: 246 EDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEIL 304

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
              + L ++ L G+AI+ +P+SI+ L G    NL  CKNL +LP +I  L SL+ +    
Sbjct: 305 EDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKS 364

Query: 786 CSKLKNVTETLGKVESLEV 804
           C +LK + E LG+++SLE+
Sbjct: 365 CPELKKLPENLGRLQSLEI 383



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 101/193 (52%), Gaps = 13/193 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+ L  L L G++I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+TL + 
Sbjct: 304 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 363

Query: 61  GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C +LKK P+ +  ++ L  LY+ D  S+     S+  L  L +L L  C  L  +PS I
Sbjct: 364 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQFPSLSGLCSLRILRLINC-GLREIPSGI 422

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA----IRRPTSSIFLMKNLRSL 175
             L SL+ L L G  +  ++PD + ++  L  L++S       I  P S      NLR+L
Sbjct: 423 CHLTSLQCLVLMG-NQFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPS------NLRTL 475

Query: 176 YFSGCNEPPASAS 188
               C     S+S
Sbjct: 476 VAHQCTSLKISSS 488



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 40/189 (21%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I++ +         G+ I+E+  +I+ L GL  L L  CKNL  LP 
Sbjct: 294 CSQL----ESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPE 349

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI------------------------- 734
           +I  L  L TL +    + ++ PE    R Q LEI                         
Sbjct: 350 SICNLTSLKTLTIKSCPELKKLPE-NLGRLQSLEILYVKDFDSMNCQFPSLSGLCSLRIL 408

Query: 735 HLEGTAIRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
            L    +R +P+ I  L S   L  + +     S+P  I+ L  L ++  S C  L+++ 
Sbjct: 409 RLINCGLREIPSGICHLTSLQCLVLMGN--QFSSIPDGISQLHKLIVLNLSHCKLLQHIP 466

Query: 794 ETLGKVESL 802
           E    + +L
Sbjct: 467 EPPSNLRTL 475


>gi|147782877|emb|CAN67859.1| hypothetical protein VITISV_009855 [Vitis vinifera]
          Length = 1383

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 156/503 (31%), Positives = 223/503 (44%), Gaps = 112/503 (22%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + EVP  IE    L+ L L GCKNL+SLP  I + K L TL  SGCS+LK FP I+  
Sbjct: 937  SDMNEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQD 995

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ME+L  LYLD T+I E+PSSIE L GL+ L L  C NLV LP SI  L SL+ L++  C 
Sbjct: 996  MENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCP 1055

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
              + +PD LG+++SL  L V                +L S+ F                 
Sbjct: 1056 NFKKLPDNLGRLQSLLHLRVG---------------HLDSMNFQ---------------- 1084

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                          LPSL+G+CSL  L L  C + E  IPS+I +L SL+ L L  N+F 
Sbjct: 1085 --------------LPSLSGLCSLGTLMLHACNIRE--IPSEIFSLSSLERLCLAGNHFS 1128

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
             +P  IS L NL  L+L  CK LQ +P++P     VR +    ++ + G       KY  
Sbjct: 1129 RIPDGISQLYNLTFLDLSHCKMLQHIPELPSG---VRRHKIQRVIFVQGC------KYRN 1179

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
            +                                   + +   + IP+W  +Q  G  IT+
Sbjct: 1180 VT----------------------------------TFIAESNGIPEWISHQKSGFKITM 1205

Query: 375  TRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKF 434
              P   Y  +  +G  +C +    +  T T     Y     + + D  GE ++I  R +F
Sbjct: 1206 KLPWSWYENDDFLGVVLCSLIVPLEIETVT-----YGCFICKLNFDDDGE-YFICERAQF 1259

Query: 435  GHVVSD----------HLWLLFLPR--HGHNWQFESNLIRLSFRSISDPTWKVKRCGFHP 482
                 D          +    ++P+  H + W+  +    +S+  +  P  KV RCGF  
Sbjct: 1260 CQCCYDDDASSQQCMMYYSKSYIPKRYHSNEWRTLNASFNVSYFDLK-PV-KVARCGFRF 1317

Query: 483  IYMHEVEEFDETTKQSTRFTSCN 505
            +Y H+ E+  E T       SCN
Sbjct: 1318 LYAHDYEQNVEDTNTDVE-RSCN 1339



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 123/261 (47%), Gaps = 38/261 (14%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M++L +LYLD T+I E+PSSIE L GL+ LTL  C NL +LP +I +L  LR L + 
Sbjct: 993  LQDMENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQ 1052

Query: 61   GCSKLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             C   KK P  +  ++ L  L   +LD  +  ++P S+  L  L  L L+ C N+  +PS
Sbjct: 1053 RCPNFKKLPDNLGRLQSLLHLRVGHLDSMNF-QLP-SLSGLCSLGTLMLHAC-NIREIPS 1109

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLR 173
             I  L SL+ L L+G      +PD + ++ +L  LD+S       I    S +   K  R
Sbjct: 1110 EIFSLSSLERLCLAG-NHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR 1168

Query: 174  SLYFSGCN---------EPPASASWHLH----------LPF------NLLGKSSCP--VA 206
             ++  GC          E      W  H          LP+      + LG   C   V 
Sbjct: 1169 VIFVQGCKYRNVTTFIAESNGIPEWISHQKSGFKITMKLPWSWYENDDFLGVVLCSLIVP 1228

Query: 207  LMLPSLTGVCSLTKLDLSDCG 227
            L + ++T  C + KL+  D G
Sbjct: 1229 LEIETVTYGCFICKLNFDDDG 1249



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 141/323 (43%), Gaps = 43/323 (13%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           + + L+ D   +  +P +      +ELL  N   N+ +L         L+ ++LS    L
Sbjct: 512 EYTYLHWDRYPLESLPLNFHAKNLVELLLRN--SNIKQLWRGSKLHDKLRVIDLSYSVHL 569

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
             +PD    V +LE L + G+ IR   SSI  +  L++L    C            L  +
Sbjct: 570 IRIPD-FSSVPNLEILTLEGS-IRDLPSSITHLNGLQTLLLQEC------------LKLH 615

Query: 197 LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
            +    C ++          SL +LDL  C + E  IPSDI +L SL++L L R +F ++
Sbjct: 616 QIPNHICHLS----------SLKELDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 665

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIIN 316
           P +I+ L  LE L L  C  L+ +P++P  L+ + A+G +   +    L L    ++++N
Sbjct: 666 PTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHGSNRTSSRAPFLPL----HSLVN 721

Query: 317 CIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVT 375
           C    +  ++   + S              G    I  PG   IPK  M +         
Sbjct: 722 CFSWAQDSKRTSFSDSFYH-----------GKGTCIFLPGGDVIPKGIMDRTNRHFERTE 770

Query: 376 RPSYLYNVNKVVGFAICCVFQVP 398
            P   +  N+ +GFAI CV+ VP
Sbjct: 771 LPQNWHQNNEFLGFAIFCVY-VP 792



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 1/135 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D+ E+ + IE    L +L L GCKNL  LP  I   K L+TL  SG S+ + FP+I   
Sbjct: 937  SDMNEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLKSFPDILQD 995

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             + L  ++L+ TAI+ +P+SIE L G     L +C NL +LP +I  L SLR +    C 
Sbjct: 996  MENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTSLRKLSVQRCP 1055

Query: 788  KLKNVTETLGKVESL 802
              K + + LG+++SL
Sbjct: 1056 NFKKLPDNLGRLQSL 1070



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 2/117 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +S+ +L  L L+G SI ++PSSI  L GL+ L L+ C  L  +P  I  L  L+ L+L 
Sbjct: 575 FSSVPNLEILTLEG-SIRDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLG 633

Query: 61  GCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 634 HCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 690



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           LR ++LS    L + P   +S+ +L  L L+G SI ++PSSI  L GL+ L L EC  L 
Sbjct: 558 LRVIDLSYSVHLIRIPDF-SSVPNLEILTLEG-SIRDLPSSITHLNGLQTLLLQECLKLH 615

Query: 114 RLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
           ++P+ I  L SLK L+L  C  +E  +P  +  + SL++L++         ++I  +  L
Sbjct: 616 QIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRL 675

Query: 173 RSLYFSGCN 181
             L  S CN
Sbjct: 676 EVLNLSHCN 684



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 22/156 (14%)

Query: 657  FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            FPDI+Q +        D T I+E+  +IE L GL  LTL  C NL  LP +I  L  L  
Sbjct: 989  FPDILQDMENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTSLRK 1048

Query: 710  LNLSGLSKFREFPEITSSRDQLLEI---HLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
            L++     F++ P+       LL +   HL+    + LP+   L S   L  L  C N++
Sbjct: 1049 LSVQRCPNFKKLPDNLGRLQSLLHLRVGHLDSMNFQ-LPSLSGLCSLGTLM-LHAC-NIR 1105

Query: 767  SLPSTINGLRSLRMM---------YPSGCSKLKNVT 793
             +PS I  L SL  +          P G S+L N+T
Sbjct: 1106 EIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLT 1141


>gi|332330344|gb|AEE43930.1| TIR-NBS-LRR resistance protein muRdr1F [Rosa multiflora]
          Length = 1161

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 247/572 (43%), Gaps = 111/572 (19%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G  S+ ++  SI  L  L++   + CK++ SLP  ++ ++ L T ++
Sbjct: 646  FTGIPNLEKLILEGCISLVKIHPSIASLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDV 704

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLK  P+ V   + LSKL + G+++  +PSS E L                     
Sbjct: 705  SGCSKLKMIPEFVGQTKTLSKLCIGGSAVENLPSSFERLS-------------------- 744

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                                       ESL ELD++G  IR    S+FL +NLR  +F  
Sbjct: 745  ---------------------------ESLVELDLNGIVIREQPYSLFLKQNLRVSFFG- 776

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                          P     KS CP+  +L SL    SLT+L L+DC L E  IP+DI  
Sbjct: 777  ------------LFP----RKSPCPLTPLLASLKHFSSLTQLKLNDCNLCEGEIPNDIGY 820

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-VRANGCSSL 298
            L SL+ L L  NNFV LPASI  L  L+ + +E+CKRLQ LP++P   +  V  + C+SL
Sbjct: 821  LSSLELLQLIGNNFVNLPASIHLLSKLKRINVENCKRLQQLPELPATDELRVVTDNCTSL 880

Query: 299  VTLFGALKLCRSKYTIINCIDSLKLLRKNGLA---ISMLREYLE---------------- 339
                    L R     ++ I+  + +   G      S L++ LE                
Sbjct: 881  QVFPDPPNLSRCPEFWLSGINCFRAVGNQGFRYFLYSRLKQLLEVLSLSLCLSLPPSLPP 940

Query: 340  ------------LQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVV 387
                        +Q      +   +V PGS+IP+WF  Q+ G S+    PSY  N +K +
Sbjct: 941  LSLSLVNMMVCMVQETPWSLYYFRLVIPGSEIPEWFNNQSVGDSVIEKLPSYACN-SKWI 999

Query: 388  GFAICCVFQVPKHSTGTY--LFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLL 445
            G A+C +  VP+ +      + H  P   + C  + +  GH      +   +VSDHL  +
Sbjct: 1000 GVALCFLI-VPQDNPSAVPEVRHLDPFTRVFCCWNKNCSGHS-RLVTRVKQIVSDHLLFV 1057

Query: 446  FLPRHGHNWQF--ESNLIRLSFRSISDPT------WKVKRCGFHPIYMHEVEEFDETTKQ 497
             LP+     Q   E     + F  + D T       +VK+CG   +Y H+ EE      Q
Sbjct: 1058 VLPKFIWKPQNCPEDTCTEIKFVFVVDQTVGNSRGLQVKKCGARILYEHDTEELISKMNQ 1117

Query: 498  STRFTSCNLNEVHHDFVGSNMEVAQASGSGSS 529
            S   +     E   +  G+ ++  Q + +  S
Sbjct: 1118 SKSSSISLYEEAVDEQEGAMVKATQEASTSRS 1149



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
              CK+++ LP  ++ +++L T ++SG SK +  PE       L ++ + G+A+  LP+S
Sbjct: 681 FRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIGGSAVENLPSS 739

Query: 748 IELLSGNIL 756
            E LS +++
Sbjct: 740 FERLSESLV 748


>gi|147789262|emb|CAN62576.1| hypothetical protein VITISV_038321 [Vitis vinifera]
          Length = 1256

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 145/439 (33%), Positives = 214/439 (48%), Gaps = 46/439 (10%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L  T+I E+ + IE L+G++ L L+ CK L SLP  I  LK L T   SGCSKL+ FP
Sbjct: 837  LCLGETAINELLN-IECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFP 895

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I   M+ L +L LDGTS+ E+PSSI+ L GL+ L L  CKNL+ +P +I  L+SL+TL 
Sbjct: 896  EITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLI 955

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            +SGC KL  +P  LG +  L  L     A R  + S              C  P  S   
Sbjct: 956  VSGCSKLNKLPKNLGSLTQLRLL----CAARLDSMS--------------CQLPSFSDLR 997

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             L +  N L +S+     +   ++ + SL ++DLS C L E  IPS+I  L SL+ LYL 
Sbjct: 998  FLKI-LN-LDRSNLVHGAIRSDISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLK 1055

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             N+F ++P+ I  L  L+ L+L  C+ LQ +P++P +L+ + A+GC  +     +     
Sbjct: 1056 GNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPELPSSLRVLDAHGC--IRLESLSSPQSL 1113

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
               ++  C  S        L   M+   L LQ     G  + ++   S I +   +Q  G
Sbjct: 1114 LLSSLFKCFKS----EIQELECRMVLSSLLLQGFFYHGVNI-VISESSGILEGTWHQ--G 1166

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY 429
            S +T+  P   Y  N  +GFA+C  +    +                 S DG G+G+   
Sbjct: 1167 SQVTMELPWNWYENNNFLGFALCSAYSSLDNE----------------SEDGDGDGYPCT 1210

Query: 430  FRGKFGHVVSDHLWLLFLP 448
            F+       S   W   JP
Sbjct: 1211 FKCCLTFWXSXSGWXCEJP 1229



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 227/532 (42%), Gaps = 76/532 (14%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  L+ DG S+  +P +      +EL  L+ C N+  L      LK L+ + L+   +L
Sbjct: 355 ELRYLHWDGYSLKYLPPNFHPKNLVEL-NLR-CSNIKQLWEGNKVLKKLKVINLNHSQRL 412

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            +FP                        S  ++P LE+L L  C +L RLP  I+ L+ L
Sbjct: 413 MEFP------------------------SFSMMPNLEILTLEGCISLKRLPMDIDRLQHL 448

Query: 126 KTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
           +TL+   C KLE  P+     +L  ++ LEEL +       PT S   + +LR L+ +G 
Sbjct: 449 QTLSCHDCSKLEYFPEIKLMESLESLQCLEELYLGWLNCELPTLSG--LSSLRVLHLNGS 506

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVAL-MLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           C  P    S         L  S C V    L  +  + SL +LDLS+C L +  IP DI 
Sbjct: 507 CITPRVIRSHEFLSLLEELSLSDCEVMEGALDHIFHLSSLKELDLSNCYLMKEGIPDDIY 566

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            L SL+ L L+  N   +PASI  L  L+ L L  CK+LQ   ++P +++F+  +     
Sbjct: 567 RLSSLQALDLSGTNIHKMPASIHHLSKLKFLWLGHCKQLQGSLKLPSSVRFLDGHDSFKS 626

Query: 299 VT----LFGALKLC-RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
           ++    L+G L  C +S+   + C        + G         ++       G  +SIV
Sbjct: 627 LSWQRWLWGFLFNCFKSEIQDVEC--------RGGW------HDIQFGQSGFFGKGISIV 672

Query: 354 FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
            P  ++P W  YQN G+ I +  P   Y  N  +GFA+C V+   +++ G     SY   
Sbjct: 673 IP--RMPHWISYQNVGNEIKIELPMDWYEDNDFLGFALCAVYVPLENTLGDVPTMSY--- 727

Query: 414 ELECSMDGSGEGHY----------IYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIR- 462
            L C +   G+              Y RG+     SB +W+   P+     +  SN  R 
Sbjct: 728 XLSCHLSLCGDQFRDSLSFYSVCECYCRGE----SSBQVWMTCYPQIAIQEKHRSNKWRQ 783

Query: 463 --LSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHD 512
              SF      ++ V +CG   IY  + +        S   + C  N  H +
Sbjct: 784 FAASFVGYXTGSFXVIKCGVTLIYEQKSKLLGSVENVSVTCSECQTNGEHEE 835



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 83/137 (60%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I EL L IE L G+  L L  CK LE LP  I  LK L+T + SG SK + FPEIT  
Sbjct: 842 TAINEL-LNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQSFPEITED 900

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L E+ L+GT+++ LP+SI+ L G    +L++CKNL ++P  I  LRSL  +  SGCS
Sbjct: 901 MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 960

Query: 788 KLKNVTETLGKVESLEV 804
           KL  + + LG +  L +
Sbjct: 961 KLNKLPKNLGSLTQLRL 977



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 9/183 (4%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            MK L +L LDGTS+ E+PSSI+ L GL+ L L+ CKNL ++P  I +L+ L TL +SGCS
Sbjct: 901  MKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCS 960

Query: 64   KLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--LPSS 118
            KL K P+ + S+  L  L    LD  S  ++PS  + L  L++L L+   NLV   + S 
Sbjct: 961  KLNKLPKNLGSLTQLRLLCAARLDSMS-CQLPSFSD-LRFLKILNLDR-SNLVHGAIRSD 1017

Query: 119  INGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            I+ L SL+ ++LS C   E  +P  +  + SL+ L + G       S I  +  L+ L  
Sbjct: 1018 ISILYSLEEVDLSYCNLAEGGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDL 1077

Query: 178  SGC 180
            S C
Sbjct: 1078 SHC 1080



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + +        DGT ++EL  +I+ L GL  L L  CKNL  +P 
Sbjct: 888 CSKL----QSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPD 943

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
            I  L+ L TL +SG SK  + P+   S  QL
Sbjct: 944 NICNLRSLETLIVSGCSKLNKLPKNLGSLTQL 975



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 21/100 (21%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC +L+RLP  I  L++L TL+    SK   FPEI     +L+E      ++  L 
Sbjct: 427 LTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEI-----KLME------SLESLQ 475

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
              EL  G +     +C+    LP T++GL SLR+++ +G
Sbjct: 476 CLEELYLGWL-----NCE----LP-TLSGLSSLRVLHLNG 505


>gi|227438275|gb|ACP30627.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1226

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/406 (35%), Positives = 208/406 (51%), Gaps = 41/406 (10%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            TS+T+  S+I  +  L  L L+ C NL SLP  I SLK L+ + LSGCSKLKKFP I   
Sbjct: 670  TSLTKC-SAIRQMDSLVSLNLRDCINLKSLPKRI-SLKSLKFVILSGCSKLKKFPTI--- 724

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             E++  LYLDGT++  VP SIE L  L +L L +C  L+ LP+++  LKSLK L LSGC 
Sbjct: 725  SENIESLYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCS 784

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            KLE+ PD    +ESLE L +  TAI++ T     M NL+   F G               
Sbjct: 785  KLESFPDINEDMESLEILLMDDTAIKQ-TPRKMDMSNLKLFSFGG--------------- 828

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                 K      L L   +G   L+ + L+DC L    +P     L  L+ L L+RNN  
Sbjct: 829  ----SKVHDLTCLELLPFSGCSRLSDMYLTDCNL--YKLPDSFSCLSLLQTLCLSRNNIK 882

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------ 308
             LP SI  L +L+ L L+ C++L SLP +P NLQ++ A+GC SL T+   + L       
Sbjct: 883  NLPGSIKKLHHLKSLYLKHCQQLVSLPVLPSNLQYLDAHGCISLETVAKPMTLLVVAERN 942

Query: 309  RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK-------LSIVFPGSQIPK 361
            +S +   +C    +  +++ +A + L+  +         HK        S  FPG+ +P 
Sbjct: 943  QSTFVFTDCFKLNRDAQESIVAHTQLKSQILGNGSLQRNHKGLVSEPLASASFPGNDLPL 1002

Query: 362  WFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
            WF +Q  GSS+    P +  + +K +G ++C V     +   T  F
Sbjct: 1003 WFRHQRMGSSMETHLPPHWCD-DKFIGLSLCVVVSFKDYVDKTNRF 1047



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 19/188 (10%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +++  LYLDGT++  VP SIE L  L +L LK C  L  LP T+  LK L+ L LSGCSK
Sbjct: 726 ENIESLYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSK 785

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+ FP I   ME L  L +D T+I + P  ++ +  L+L             S ++ L  
Sbjct: 786 LESFPDINEDMESLEILLMDDTAIKQTPRKMD-MSNLKLFSFG--------GSKVHDLTC 836

Query: 125 LKTLNLSGC----------CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           L+ L  SGC          C L  +PD+   +  L+ L +S   I+    SI  + +L+S
Sbjct: 837 LELLPFSGCSRLSDMYLTDCNLYKLPDSFSCLSLLQTLCLSRNNIKNLPGSIKKLHHLKS 896

Query: 175 LYFSGCNE 182
           LY   C +
Sbjct: 897 LYLKHCQQ 904



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 4/131 (3%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           AI  +  LV L L  C NL+ LP+ IS LK L  + LSG SK ++FP I+ + + L   +
Sbjct: 677 AIRQMDSLVSLNLRDCINLKSLPKRIS-LKSLKFVILSGCSKLKKFPTISENIESL---Y 732

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L+GTA++ +P SIE L    + NLK C  L  LP+T+  L+SL+ +  SGCSKL++  + 
Sbjct: 733 LDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLCKLKSLKELLLSGCSKLESFPDI 792

Query: 796 LGKVESLEVRL 806
              +ESLE+ L
Sbjct: 793 NEDMESLEILL 803



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)

Query: 647 CSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS+L     +FP I + +     DGT ++ +  +IE L  L  L L  C  L  LP T+ 
Sbjct: 715 CSKL----KKFPTISENIESLYLDGTAVKRVPESIENLQKLTVLNLKKCSRLMHLPTTLC 770

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            LK L  L LSG SK   FP+I    + L  + ++ TAI+  P  ++      +SNLK  
Sbjct: 771 KLKSLKELLLSGCSKLESFPDINEDMESLEILLMDDTAIKQTPRKMD------MSNLK-- 822

Query: 763 KNLKSL-PSTINGLRSLRMMYPSGCSKLKNV 792
             L S   S ++ L  L ++  SGCS+L ++
Sbjct: 823 --LFSFGGSKVHDLTCLELLPFSGCSRLSDM 851



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 11/93 (11%)

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           +NL+GL + R          +L  ++LE        ++I  +   +  NL+DC NLKSLP
Sbjct: 650 MNLTGLLEAR----------KLERLNLENCTSLTKCSAIRQMDSLVSLNLRDCINLKSLP 699

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             I+ L+SL+ +  SGCSKLK        +ESL
Sbjct: 700 KRIS-LKSLKFVILSGCSKLKKFPTISENIESL 731


>gi|147817181|emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 168/518 (32%), Positives = 242/518 (46%), Gaps = 65/518 (12%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++K+L DL +  + I ++    ++L  L+ + LK  K L+  P   S +  L  L L GC
Sbjct: 518 NLKNLVDLSMPYSQIKQLWKGTKVLXNLKFMNLKHSKFLTETP-DFSRVTNLERLVLKGC 576

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L K   +  S+ DL KL                      L L  CK L  LPS I  L
Sbjct: 577 ISLYK---VHPSLGDLXKL--------------------NFLSLKNCKMLKSLPSCICDL 613

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           K L+   LSGC K E +P+  G +E L+E    GTAIR   SS  L++NL  L F  C  
Sbjct: 614 KCLEXFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLRNLEILSFEXCKG 673

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
           PP S SW L        +SS     +L  L+ + SL  L LS C + + A    +  L S
Sbjct: 674 PPPSTSWWLP------RRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSLGFLSS 727

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL- 301
           L++L L+ NNFVTLP++I  L +L+ L LE+CKRLQ+LP++P +++ + A  C+SL T+ 
Sbjct: 728 LEDLDLSENNFVTLPSNIXRLPHLKMLGLENCKRLQALPELPTSIRSIMARNCTSLETIS 787

Query: 302 ---FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
              F +L +       I C      + ++GL +                  LS V  GS+
Sbjct: 788 NQSFSSLLMTVRLKEHIYCP-----INRDGLLVP----------------ALSAVXFGSR 826

Query: 359 IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF----HSYPAHE 414
           IP W  YQ+ GS +    P   ++ N  +G A+C V  VP+  +    F     S     
Sbjct: 827 IPDWIRYQSSGSEVKAELPPNWFDSN-FLGLALCVV-TVPRLVSLADFFGLFWRSCTLFY 884

Query: 415 LECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLP-RHGHNWQFESNLIRLSFRSISDPTW 473
              S   S    Y Y     G V SDHLWL+++P  H  NWQ +   I+ SFR  +    
Sbjct: 885 STSSHXSSSFDVYTYPNHLKGKVESDHLWLVYVPLPHFINWQ-QVTHIKASFRITTFMRL 943

Query: 474 KV-KRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVH 510
            V K CG   +Y++E   +   +      +S  L E+H
Sbjct: 944 NVIKECGIGLVYVNEELNYSXFSPPPNE-SSVVLQEIH 980



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 43/78 (55%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+L  CK L+ LP  I  LK L    LSG SKF E PE   + + L E   +GTAIR LP
Sbjct: 595 LSLKNCKMLKSLPSCICDLKCLEXFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLP 654

Query: 746 ASIELLSGNILSNLKDCK 763
           +S  LL    + + + CK
Sbjct: 655 SSFSLLRNLEILSFEXCK 672


>gi|255544956|ref|XP_002513539.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223547447|gb|EEF48942.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1403

 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 179/609 (29%), Positives = 280/609 (45%), Gaps = 133/609 (21%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            ++ +L+LDGT + E PSS++ L  L LL+L  C++L SLP +I  L  L  L+LS CS L
Sbjct: 736  EIEELHLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSIH-LNSLDNLDLSWCSSL 794

Query: 66   KKFPQIVA--------------------SMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            K FP +V                     S+  L+KL L  T I E+PSSI  L  L  L 
Sbjct: 795  KNFPDVVGNIKYLNVGHTAIEELPSSIGSLVSLTKLNLKDTEIKELPSSIGNLSSLVELN 854

Query: 106  LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS 165
            L E  ++  LPSSI  L SL  LN++    +E +P +LG++ SL E ++  + +    SS
Sbjct: 855  LKE-SSIKELPSSIGCLSSLVKLNIA-VVDIEELPSSLGQLSSLVEFNLEKSTLTALPSS 912

Query: 166  IFLMKNLRSLYFS-----------GC---------NEPPASASWHLHLPFNLLGKSSCPV 205
            I  + +L  L  +           GC         ++ P   S    LPF++ G+  C  
Sbjct: 913  IGCLTSLVKLNLAVTEIKELPPSIGCLSSLVELNLSQCPMLGS----LPFSI-GELKCLE 967

Query: 206  ALML---------------------------------PSLTGVCSLTKLDLSDCGLGEAA 232
             L L                                 PSL+G  SL  L LS  G+    
Sbjct: 968  KLYLCGLRRLRSIPSSIRELKRLQDVYLNHCTKLSKLPSLSGCSSLRDLVLSYSGI--VK 1025

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            +P  +  L SL+ L L  NNF+ +PA+I  L  LE L++  CKRL++LP++P  ++ + A
Sbjct: 1026 VPGSLGYLSSLQVLLLKGNNFMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVLVA 1085

Query: 293  NGCSSLVTLFGALKLCRSK----------YTIINCIDSLKLLRKNGLAISMLR------E 336
            + C+SL T+   L   +            +T  NC+   K  R N +  ++L+       
Sbjct: 1086 HNCTSLKTVSSPLIQFQESQEQSPDDKYGFTFANCVSLEKNARSNIVESALLKTQHLATA 1145

Query: 337  YLELQAVSDPGHKLSIV-FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
             LEL    +      +V FPGS+IP+ F YQN G+S+T   PS  +N NK+VGF  C V 
Sbjct: 1146 VLELLTSYEEILVSPVVCFPGSEIPECFRYQNTGASVTTLLPSKWHN-NKLVGFTFCAVI 1204

Query: 396  QVP-KHSTGTYLFHSYPAHELECSMDGSGEGHYIYFR----GKFGHVV---SDHLWL--- 444
            ++  +H    + F      + +C ++    G  + F     G++G+     +DH++L   
Sbjct: 1205 ELENRHYQDGFTF------QCDCRIENE-YGDSLEFTSKEIGEWGNQFEFETDHVFLWNT 1257

Query: 445  --LFLPRHGHNWQFESNLIRLSFR---------SISDP---TWKVKRCGFHPIYMHEVEE 490
              +++       Q   N     F           +  P   ++KVK  GF+P+Y  + +E
Sbjct: 1258 SCIYILTEERYEQLRKNSCTAIFEFACYTEDEYKVMLPGANSFKVKNSGFNPVYAKDEKE 1317

Query: 491  FDETTKQST 499
            +D +  Q++
Sbjct: 1318 WDLSIDQTS 1326



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 132/357 (36%), Positives = 189/357 (52%), Gaps = 40/357 (11%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++S  +L  + L+  TS+ E+PSSI+ L  L  L+L  CK L SLP  I  LK L+TL L
Sbjct: 663 LSSASNLEKIILNNCTSLLEIPSSIQCLRKLVCLSLSNCKELQSLPSLIP-LKYLKTLNL 721

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S CS LKKFP+I   +E+L   +LDGT + E PSS++ L  L LL L+ C++L  LP SI
Sbjct: 722 SSCSNLKKFPEISGEIEEL---HLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSI 778

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF-- 177
           + L SL  L+LS C  L+N PD +G ++    L+V  TAI    SSI  + +L  L    
Sbjct: 779 H-LNSLDNLDLSWCSSLKNFPDVVGNIKY---LNVGHTAIEELPSSIGSLVSLTKLNLKD 834

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSD 236
           +   E P+S      L    L +SS      LPS  G + SL KL+++   + E  +PS 
Sbjct: 835 TEIKELPSSIGNLSSLVELNLKESSIK---ELPSSIGCLSSLVKLNIAVVDIEE--LPSS 889

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC- 295
           +  L SL E  L ++    LP+SI  L +L +L L     +  + ++PP++      GC 
Sbjct: 890 LGQLSSLVEFNLEKSTLTALPSSIGCLTSLVKLNLA----VTEIKELPPSI------GCL 939

Query: 296 SSLVTL-------FGALKLCRSKYTIINCIDSLKL--LRKNGLAISMLREYLELQAV 343
           SSLV L        G+L     +   + C++ L L  LR+     S +RE   LQ V
Sbjct: 940 SSLVELNLSQCPMLGSLPFSIGE---LKCLEKLYLCGLRRLRSIPSSIRELKRLQDV 993



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 5/142 (3%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L++ T + E+  +I+ L  LV L+L+ CK L+ LP  I  LKYL TLNLS  S  ++FP
Sbjct: 673 ILNNCTSLLEIPSSIQCLRKLVCLSLSNCKELQSLPSLI-PLKYLKTLNLSSCSNLKKFP 731

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI+    ++ E+HL+GT +   P+S++ L    L +L  C++LKSLP +I+ L SL  + 
Sbjct: 732 EISG---EIEELHLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSIH-LNSLDNLD 787

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
            S CS LKN  + +G ++ L V
Sbjct: 788 LSWCSSLKNFPDVVGNIKYLNV 809



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 136/291 (46%), Gaps = 53/291 (18%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           SM++L +L +  + + E+ + ++ L  L+LL L   + L +LP  +SS   L  + L+ C
Sbjct: 619 SMENLVELNMPFSQVKELWTGVKHLQKLKLLDLHDSELLVTLP-DLSSASNLEKIILNNC 677

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
                                  TS+ E+PSSI+ L  L  L L+ CK L  LPS I  L
Sbjct: 678 -----------------------TSLLEIPSSIQCLRKLVCLSLSNCKELQSLPSLI-PL 713

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           K LKTLNLS C  L+  P+  G++   EEL + GT +    SS+  +  LR L    C +
Sbjct: 714 KYLKTLNLSSCSNLKKFPEISGEI---EELHLDGTGLEEWPSSVQYLDKLRLLSLDHCED 770

Query: 183 PPA-SASWHLHLPFNLLGKSSCPVALMLPSLTG---------------------VCSLTK 220
             +   S HL+   + L  S C      P + G                     + SLTK
Sbjct: 771 LKSLPGSIHLN-SLDNLDLSWCSSLKNFPDVVGNIKYLNVGHTAIEELPSSIGSLVSLTK 829

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L+L D  + E  +PS I NL SL EL L  ++   LP+SI  L +L +L +
Sbjct: 830 LNLKDTEIKE--LPSSIGNLSSLVELNLKESSIKELPSSIGCLSSLVKLNI 878



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 5/133 (3%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           +CS L +  +   +I ++  DGT + E   +++ L  L  L+L+ C++L+ LP +I  L 
Sbjct: 723 SCSNLKKFPEISGEIEELHLDGTGLEEWPSSVQYLDKLRLLSLDHCEDLKSLPGSIH-LN 781

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L  L+LS  S  + FP++  +   L   H   TAI  LP+SI  L      NLKD + +
Sbjct: 782 SLDNLDLSWCSSLKNFPDVVGNIKYLNVGH---TAIEELPSSIGSLVSLTKLNLKDTE-I 837

Query: 766 KSLPSTINGLRSL 778
           K LPS+I  L SL
Sbjct: 838 KELPSSIGNLSSL 850



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 3/136 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T+I+EL  +I  L  LV+L L    +++ LP +I  L  L  LN++ +    E P     
Sbjct: 835 TEIKELPSSIGNLSSLVELNLKE-SSIKELPSSIGCLSSLVKLNIA-VVDIEELPSSLGQ 892

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L+E +LE + +  LP+SI  L+  +  NL     +K LP +I  L SL  +  S C 
Sbjct: 893 LSSLVEFNLEKSTLTALPSSIGCLTSLVKLNLA-VTEIKELPPSIGCLSSLVELNLSQCP 951

Query: 788 KLKNVTETLGKVESLE 803
            L ++  ++G+++ LE
Sbjct: 952 MLGSLPFSIGELKCLE 967



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 24/158 (15%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T+I+EL  +I  L  LV+L L+ C  L  LP +I  LK L  L L GL + R  P     
Sbjct: 927  TEIKELPPSIGCLSSLVELNLSQCPMLGSLPFSIGELKCLEKLYLCGLRRLRSIPSSIRE 986

Query: 728  RDQLLEIHLEG-----------------------TAIRGLPASIELLSGNILSNLKDCKN 764
              +L +++L                         + I  +P S+  LS   +  LK   N
Sbjct: 987  LKRLQDVYLNHCTKLSKLPSLSGCSSLRDLVLSYSGIVKVPGSLGYLSSLQVLLLKG-NN 1045

Query: 765  LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               +P+TI  L  L ++  S C +LK + E   ++  L
Sbjct: 1046 FMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVL 1083



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
           +  L+ L  L+L         P+++S+ +    I    T++  +P+SI+ L   +  +L 
Sbjct: 640 VKHLQKLKLLDLHDSELLVTLPDLSSASNLEKIILNNCTSLLEIPSSIQCLRKLVCLSLS 699

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +CK L+SLPS I  L+ L+ +  S CS LK   E  G++E L +
Sbjct: 700 NCKELQSLPSLI-PLKYLKTLNLSSCSNLKKFPEISGEIEELHL 742



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 2/89 (2%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G   +E LP +I +L  L+ LNL   ++ +E P    +   L+E++L+ ++I+ LP+SI 
Sbjct: 810 GHTAIEELPSSIGSLVSLTKLNLKD-TEIKELPSSIGNLSSLVELNLKESSIKELPSSIG 868

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSL 778
            LS  +  N+    +++ LPS++  L SL
Sbjct: 869 CLSSLVKLNIA-VVDIEELPSSLGQLSSL 896


>gi|359493225|ref|XP_002264620.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1448

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 165/493 (33%), Positives = 236/493 (47%), Gaps = 99/493 (20%)

Query: 12   LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
             + + + E+P  IE    L+ L L+GCK L SLP +I   K L TL   GCS+L+ FP+I
Sbjct: 983  FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1041

Query: 72   VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            +  ME L KL L G++I E+PSSI+ L GL+ L L  CKNLV LP SI  L SLKTL + 
Sbjct: 1042 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1101

Query: 132  GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             C +L+ +P+ LG+++SLE               I  +K+  S+                
Sbjct: 1102 SCPELKKLPENLGRLQSLE---------------ILYVKDFDSM---------------- 1130

Query: 192  HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                      +C     LPSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N
Sbjct: 1131 ----------NC----QLPSLSGLCSLRILRLINCGLRE--IPSGICHLTSLQCLVLMGN 1174

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
             F + P  IS L  L  L L  CK LQ +P+ P NL  + A+ C+S       LK+  S 
Sbjct: 1175 QFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITLVAHQCTS-------LKISSS- 1226

Query: 312  YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF-PGSQ-IPKWFMYQNEG 369
                        L  +    S +++++       PG KL   F P S  IP+W  +Q +G
Sbjct: 1227 ------------LLWSPFFKSGIQKFV-------PGVKLLDTFIPESNGIPEWISHQKKG 1267

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVP-----------KHSTGTYLFHSYPAHELECS 418
            S IT+T P   Y  +  +GFA+C +  VP           ++      F++ P+  +   
Sbjct: 1268 SKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNFICKLNFNNNPSLVVR-- 1324

Query: 419  MDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIR---LSFRSISD-PTWK 474
             D     H    R       S+ LWL+ + +      + SN  R    SF++  D  + K
Sbjct: 1325 -DIQSRRHCQICRDG---DESNQLWLIKIAKSMIPNIYHSNKYRTLNASFKNDFDTKSVK 1380

Query: 475  VKRCGFHPIYMHE 487
            V+RCGF  +Y  +
Sbjct: 1381 VERCGFQLLYAQD 1393



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            + +D++EL + IE    L  L L GCK L+ LP +I   K L+TL   G S+   FPEI 
Sbjct: 984  EDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEIL 1042

Query: 726  SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
               + L ++ L G+AI+ +P+SI+ L G    NL  CKNL +LP +I  L SL+ +    
Sbjct: 1043 EDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKS 1102

Query: 786  CSKLKNVTETLGKVESLEV 804
            C +LK + E LG+++SLE+
Sbjct: 1103 CPELKKLPENLGRLQSLEI 1121



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 24/128 (18%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +TE+P     +  LE+LTLKGC  L  LP  I   K L+TL    CSKLK+FP+I  +M 
Sbjct: 654 LTEIPD-FSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMR 712

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L +L L GT+I E+PSS                      SS   LK+LK L+  GC KL
Sbjct: 713 KLRELDLSGTAIEELPSS----------------------SSFGHLKALKILSFRGCSKL 750

Query: 137 ENVP-DTL 143
             +P DTL
Sbjct: 751 NKIPTDTL 758



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 3/156 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L L G++I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+TL + 
Sbjct: 1042 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1101

Query: 61   GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C +LKK P+ +  ++ L  LY+ D  S+     S+  L  L +L L  C  L  +PS I
Sbjct: 1102 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINC-GLREIPSGI 1160

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
              L SL+ L L G  +  + PD + ++  L  L++S
Sbjct: 1161 CHLTSLQCLVLMG-NQFSSKPDGISQLHKLIVLNLS 1195



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 23/112 (20%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC  LE LPR I   K+L TL+    SK + FPEI  +  +L E+ L GTAI  LP
Sbjct: 669 LTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELP 728

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV-TETL 796
           +S                      S+   L++L+++   GCSKL  + T+TL
Sbjct: 729 SS----------------------SSFGHLKALKILSFRGCSKLNKIPTDTL 758



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           + E+P     +P LE+L L  C  L  LP  I   K L+TL+   C KL+  P+  G + 
Sbjct: 654 LTEIPD-FSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMR 712

Query: 148 SLEELDVSGTAIRR-PTSSIF-LMKNLRSLYFSGCNE 182
            L ELD+SGTAI   P+SS F  +K L+ L F GC++
Sbjct: 713 KLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSK 749



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 99/255 (38%), Gaps = 56/255 (21%)

Query: 162 PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL 221
           PT+  F  K+L  L   G N         LH   N++  S       +P  + V +L  L
Sbjct: 612 PTN--FHAKDLVELILRGSNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEIL 669

Query: 222 DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            L  C   E                         LP  I    +L+ L   DC +L+  P
Sbjct: 670 TLKGCVKLEC------------------------LPRGIYKWKHLQTLSCGDCSKLKRFP 705

Query: 282 QIPPNLQFVRANGCSSLV-------TLFGALKLCR-------SKYTIINCIDSLKLLRKN 327
           +I  N++ +R    S          + FG LK  +       SK   I   D+L L   +
Sbjct: 706 EIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIP-TDTLDL---H 761

Query: 328 GLAISMLREYLELQAVSDP---GHKLSIVFPG-SQIPKWFMYQNEGSSITVTRPSYLYNV 383
           G  +  L +    Q  +D    G+ + IV PG S +P+W M +      T+  P   +  
Sbjct: 762 GAFVQDLNQC--SQNCNDSAYHGNGICIVLPGHSGVPEWMMERR-----TIELPQNWHQD 814

Query: 384 NKVVGFAICCVFQVP 398
           N+ +GFAICCV+ VP
Sbjct: 815 NEFLGFAICCVY-VP 828



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIEL--LTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +M+ L +L L GT+I E+PSS     L  L++L+ +GC  L+ +P     L      +L
Sbjct: 709 GNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDTLDLHGAFVQDL 768

Query: 60  SGCSK 64
           + CS+
Sbjct: 769 NQCSQ 773


>gi|449481499|ref|XP_004156201.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 688

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 166/513 (32%), Positives = 257/513 (50%), Gaps = 31/513 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G   + ++  S+  L  L  L L+ CK L+++P  IS L+ L+ L L
Sbjct: 87  FSGVPNLERLVLSGCVELHQLHHSLGNLNHLIQLDLRNCKKLTNIPFNIS-LESLKILVL 145

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS L  FP+I ++M  L +L+LD TSI  + SSI  L  L LL L  C +L++LPS+I
Sbjct: 146 SGCSNLTHFPKISSNMNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTI 205

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L SLKTLNL+GC KL+++P++LG + SLE+LD++ T + +   S  L+  L  L   G
Sbjct: 206 GSLTSLKTLNLNGCSKLDSLPESLGDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQG 265

Query: 180 CNEPPASA---SWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
            +     +   +W     F     S+    L + +  T  CSL  L+LSDC L +  +P+
Sbjct: 266 LSRKFLHSLFPTWKFTRKF-----SNYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPN 320

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
           D+ +L SL+ L+L++N+F  LP SI  L+NL +L L +C  L SLP++P +++ V A  C
Sbjct: 321 DLRSLASLQILHLSKNHFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVREVEARDC 380

Query: 296 SSLVTLFGALKLCRSK---YTIINC------IDSLKLLRKNGLAI---SMLREYLELQAV 343
            SL   +   K   S     T I C       +S  + +    AI   +M++ Y+E+  +
Sbjct: 381 VSLKEYYNKEKQIPSSELGITFIRCPISKEPSESYNIDQPRLSAIHLRTMVQRYIEV--L 438

Query: 344 SDPGHKLSIVFPGSQIPKWFMYQNEGSSITV-TRPSYLYNVNKVVGFAICCVFQVPKHST 402
           +    K   V P       F  +  G SIT    P Y+   N  +G A+   F+V KH  
Sbjct: 439 TWQQEKYFFVIPCPNCIGCFDKKKYGFSITACCEPDYISEENPRIGIALGAAFEVQKHEM 498

Query: 403 GTYLFHSYPAHELECSM--DGSGEGHYIYFRGKFGHVVSD-HLWLLFLP-RHGHNWQFES 458
                 +    E    M  D       I F G+   + S   L + ++P +   +W  +S
Sbjct: 499 RNNSNDAKICCEFIVKMETDECPPKSAIVFDGQRDELGSPVGLSVFYIPMKRISSWLNQS 558

Query: 459 NLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEF 491
             I +S  +  +P  K+K CG   +Y      F
Sbjct: 559 CCIDVSIVT-DNPFVKIKWCGASILYEQNAGSF 590



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 11/176 (6%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VLS   ++ +L  ++  L  L+QL L  CK L  +P  IS L+ L  L LSG S    FP
Sbjct: 97  VLSGCVELHQLHHSLGNLNHLIQLDLRNCKKLTNIPFNIS-LESLKILVLSGCSNLTHFP 155

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +I+S+ + LLE+HL+ T+I+ L +SI  L+  +L NLK+C +L  LPSTI  L SL+ + 
Sbjct: 156 KISSNMNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLN 215

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
            +GCSKL ++ E+LG + SLE         K+     CV Q+ + +   L K E+L
Sbjct: 216 LNGCSKLDSLPESLGDISSLE---------KLDITSTCVNQAPM-SFQLLTKLEIL 261



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 18/294 (6%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTG-LELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           M +L  L L+   ++E    IE L+  L  L   G   L +LP   +    L  LEL   
Sbjct: 1   MTNLRILKLNNVHLSE---EIEYLSDQLRFLNWHGYP-LKTLPSNFNPTNLLE-LELPN- 54

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           S +        SME L  + L  +           +P LE L L+ C  L +L  S+  L
Sbjct: 55  SSIHHLWTASKSMETLKVINLSDSQFLSKTPDFSGVPNLERLVLSGCVELHQLHHSLGNL 114

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFS 178
             L  L+L  C KL N+P  +  +ESL+ L +SG    T   + +S+   M +L  L+  
Sbjct: 115 NHLIQLDLRNCKKLTNIPFNIS-LESLKILVLSGCSNLTHFPKISSN---MNHLLELHLD 170

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
             +     +S        LL   +C   L LPS  G + SL  L+L+ C   + ++P  +
Sbjct: 171 ETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLD-SLPESL 229

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            ++ SL++L +        P S   L  LE L  +   R + L  + P  +F R
Sbjct: 230 GDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGLSR-KFLHSLFPTWKFTR 282


>gi|224111080|ref|XP_002332990.1| predicted protein [Populus trichocarpa]
 gi|222834667|gb|EEE73130.1| predicted protein [Populus trichocarpa]
          Length = 881

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 161/546 (29%), Positives = 261/546 (47%), Gaps = 85/546 (15%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +K L+ L L G +S+  +P SI +L  L  L L GC  L SL  +I  LKCL  L L
Sbjct: 347 IGELKSLTSLNLSGCSSLESLPDSIGMLKSLYQLDLSGCLRLESLLESIGGLKCLAKLHL 406

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           +GCS L   P  +  ++ L+KL+L G S +A +P SI+ L  L++L+L+ C  L  LP S
Sbjct: 407 TGCSGLASVPDNIDRLKSLAKLHLSGCSGLASLPDSIDRLKCLDMLHLSGCLGLASLPDS 466

Query: 119 IN----GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG------------------ 156
           I+     LKSLK L+LSGC  L ++PD +G+++SL+ L+++G                  
Sbjct: 467 IDDNIGALKSLKWLHLSGCSGLASLPDRIGELKSLKSLNLNGCSGLASLPNNIGALKSLK 526

Query: 157 ----TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALM 208
               + +     +I  ++ L  L  SGC +    P +  +  L    +L+G   C     
Sbjct: 527 LLHLSGLESLPDNIGGLRCLTMLNLSGCFKLASLPDSIGALKLLCTLHLIG---CSGLKS 583

Query: 209 LPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
           LP   G +  LT LDLS+           + +L SL +L L++ +F  +PASI  L  L 
Sbjct: 584 LPESIGELKRLTTLDLSE----------RLGSLVSLTQLRLSQIDFERIPASIKQLTKLS 633

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTII----NCIDSLKL 323
           +L L+DCK+LQ LP++P  LQ + A+GC SL ++         +Y  +    N  + L+L
Sbjct: 634 KLYLDDCKQLQCLPELPSTLQVLIASGCISLKSVASIFMQGDREYKAVSQEFNFSECLQL 693

Query: 324 -------------LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQN-EG 369
                        LR   +A S+  +    +   +P  ++ +  PGS++ + F Y+N EG
Sbjct: 694 DQNSHFRIMGAAHLRIRRMATSLFYQ----EYAGNPLKEVRLCIPGSEVLERFSYKNREG 749

Query: 370 SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH-ELECSMDGSGEGHYI 428
           SS+ + +P++ +      GF +C V    +           P + + EC +  S +G  I
Sbjct: 750 SSVKIRQPAHWHR-----GFTLCAVVSFGQSG------ERRPVNIKCECHLI-SKDGTQI 797

Query: 429 YFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLI----RLSFRSISDPTWKVKRCGFHPIY 484
                +  +  + +  L+   H   W   S          F+S    T  V  CG HP++
Sbjct: 798 DLSSYYYEIYEEKVRSLWGREHVFIWSVHSKCFFKEASFQFKSPWGATDVVVGCGVHPLF 857

Query: 485 MHEVEE 490
           ++E E+
Sbjct: 858 VNEPEQ 863



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 161/316 (50%), Gaps = 41/316 (12%)

Query: 4   MKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +K L  L L G S +  +  SI +L  L+   L GC  L+SLP  I +LK L++L LSGC
Sbjct: 223 LKSLKSLNLHGCSGLASLTHSIGMLKSLDQFDLNGCSRLASLPNNIDALKSLKSLHLSGC 282

Query: 63  SKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELL-------PGLELLYLNECKNLVR 114
           S L   P  +  ++ L +L L D + +A +P  +  L         ++LL L+ C  L  
Sbjct: 283 SGLVSLPNSIGVLKSLDQLDLSDCSRLASLPDRLASLLDKIGEFKSMKLLKLHGCSGLAS 342

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLR 173
           L  +I  LKSL +LNLSGC  LE++PD++G ++SL +LD+SG   +     SI  +K L 
Sbjct: 343 LLDNIGELKSLTSLNLSGCSSLESLPDSIGMLKSLYQLDLSGCLRLESLLESIGGLKCLA 402

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
            L+ +GC+                 G +S P      ++  + SL KL LS C  G A++
Sbjct: 403 KLHLTGCS-----------------GLASVP-----DNIDRLKSLAKLHLSGCS-GLASL 439

Query: 234 PSDIDNLHSLKELYLNRN-NFVTLPAS----ISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           P  ID L  L  L+L+      +LP S    I  L +L+ L L  C  L SLP     L+
Sbjct: 440 PDSIDRLKCLDMLHLSGCLGLASLPDSIDDNIGALKSLKWLHLSGCSGLASLPDRIGELK 499

Query: 289 FVRA---NGCSSLVTL 301
            +++   NGCS L +L
Sbjct: 500 SLKSLNLNGCSGLASL 515



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 5/145 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + +  L  +I +L  L QL L+GC  LE L  +I  LK L+ L+L+G S     P+
Sbjct: 358 LSGCSSLESLPDSIGMLKSLYQLDLSGCLRLESLLESIGGLKCLAKLHLTGCSGLASVPD 417

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN----GLRSL 778
                  L ++HL G + +  LP SI+ L    + +L  C  L SLP +I+     L+SL
Sbjct: 418 NIDRLKSLAKLHLSGCSGLASLPDSIDRLKCLDMLHLSGCLGLASLPDSIDDNIGALKSL 477

Query: 779 RMMYPSGCSKLKNVTETLGKVESLE 803
           + ++ SGCS L ++ + +G+++SL+
Sbjct: 478 KWLHLSGCSGLASLPDRIGELKSLK 502



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 16/174 (9%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLA-----------IELLFGLVQLTLNGCKNL 694
           +CSRL    D    ++  + +   ++ L L            I  L  L  L L+GC +L
Sbjct: 305 DCSRLASLPDRLASLLDKIGEFKSMKLLKLHGCSGLASLLDNIGELKSLTSLNLSGCSSL 364

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSG 753
           E LP +I  LK L  L+LSG  +     E       L ++HL G + +  +P +I+ L  
Sbjct: 365 ESLPDSIGMLKSLYQLDLSGCLRLESLLESIGGLKCLAKLHLTGCSGLASVPDNIDRLKS 424

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK----NVTETLGKVESLE 803
               +L  C  L SLP +I+ L+ L M++ SGC  L     ++ + +G ++SL+
Sbjct: 425 LAKLHLSGCSGLASLPDSIDRLKCLDMLHLSGCLGLASLPDSIDDNIGALKSLK 478



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 12/161 (7%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L+GC  L  LP  I  LK L +LNL+G S     P    +   L  +HL G  +  LP
Sbjct: 480 LHLSGCSGLASLPDRIGELKSLKSLNLNGCSGLASLPNNIGALKSLKLLHLSG--LESLP 537

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV- 804
            +I  L    + NL  C  L SLP +I  L+ L  ++  GCS LK++ E++G+++ L   
Sbjct: 538 DNIGGLRCLTMLNLSGCFKLASLPDSIGALKLLCTLHLIGCSGLKSLPESIGELKRLTTL 597

Query: 805 -------RLSSWNRPKM-QNDFDCVEQSAVETVTKLAKAEL 837
                   L S  + ++ Q DF+ +  S ++ +TKL+K  L
Sbjct: 598 DLSERLGSLVSLTQLRLSQIDFERIPAS-IKQLTKLSKLYL 637



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 8/132 (6%)

Query: 679 LLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           +L  L  L L+GC  L  L  +I  LK L   +L+G S+    P    +   L  +HL G
Sbjct: 222 MLKSLKSLNLHGCSGLASLTHSIGMLKSLDQFDLNGCSRLASLPNNIDALKSLKSLHLSG 281

Query: 739 -TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL-------RSLRMMYPSGCSKLK 790
            + +  LP SI +L      +L DC  L SLP  +  L       +S++++   GCS L 
Sbjct: 282 CSGLVSLPNSIGVLKSLDQLDLSDCSRLASLPDRLASLLDKIGEFKSMKLLKLHGCSGLA 341

Query: 791 NVTETLGKVESL 802
           ++ + +G+++SL
Sbjct: 342 SLLDNIGELKSL 353



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 8/143 (5%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + +  L+ +I +L  L Q  LNGC  L  LP  I ALK L +L+LSG S     P     
Sbjct: 235 SGLASLTHSIGMLKSLDQFDLNGCSRLASLPNNIDALKSLKSLHLSGCSGLVSLPNSIGV 294

Query: 728 RDQLLEIHL-EGTAIRGLPASIELLSGNI-------LSNLKDCKNLKSLPSTINGLRSLR 779
              L ++ L + + +  LP  +  L   I       L  L  C  L SL   I  L+SL 
Sbjct: 295 LKSLDQLDLSDCSRLASLPDRLASLLDKIGEFKSMKLLKLHGCSGLASLLDNIGELKSLT 354

Query: 780 MMYPSGCSKLKNVTETLGKVESL 802
            +  SGCS L+++ +++G ++SL
Sbjct: 355 SLNLSGCSSLESLPDSIGMLKSL 377



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L L+GC  L  L   I  LK L++LNLSG S     P+       L ++ L G   +  L
Sbjct: 332 LKLHGCSGLASLLDNIGELKSLTSLNLSGCSSLESLPDSIGMLKSLYQLDLSGCLRLESL 391

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             SI  L      +L  C  L S+P  I+ L+SL  ++ SGCS L ++ +++ +++ L++
Sbjct: 392 LESIGGLKCLAKLHLTGCSGLASVPDNIDRLKSLAKLHLSGCSGLASLPDSIDRLKCLDM 451



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 18/126 (14%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS---------------S 727
           L  L L+GC  L  LP +I ALK L TL+L G S  +  PE                  S
Sbjct: 546 LTMLNLSGCFKLASLPDSIGALKLLCTLHLIGCSGLKSLPESIGELKRLTTLDLSERLGS 605

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L ++ L       +PASI+ L+      L DCK L+ LP   +   +L+++  SGC 
Sbjct: 606 LVSLTQLRLSQIDFERIPASIKQLTKLSKLYLDDCKQLQCLPELPS---TLQVLIASGCI 662

Query: 788 KLKNVT 793
            LK+V 
Sbjct: 663 SLKSVA 668



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 51/218 (23%)

Query: 630 KWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL- 688
           K G++ V +++  +P   SRLWE  D   + + ++ D T  +EL+L+     G+  L L 
Sbjct: 89  KLGKKIVLQENV-DPRERSRLWEADDINLESISLIFDAT--KELTLSPTAFEGMYNLRLL 145

Query: 689 -----------------NGCKNLERLPRTI----SALKYLSTLNLSGLSKFREFPEITSS 727
                            NG +    LPR +    S L++L   N +     + FP I   
Sbjct: 146 KIYYPPFLKDPSKEKIMNGKRVGIHLPRGLHFLSSELRFLYWYNYA----LKSFPSIFFP 201

Query: 728 R---------DQLLEIHLEG-------------TAIRGLPASIELLSGNILSNLKDCKNL 765
                      QL ++  EG             + +  L  SI +L      +L  C  L
Sbjct: 202 EKLVQLEMPCSQLEQLRNEGMLKSLKSLNLHGCSGLASLTHSIGMLKSLDQFDLNGCSRL 261

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            SLP+ I+ L+SL+ ++ SGCS L ++  ++G ++SL+
Sbjct: 262 ASLPNNIDALKSLKSLHLSGCSGLVSLPNSIGVLKSLD 299


>gi|359493572|ref|XP_002270741.2| PREDICTED: uncharacterized protein LOC100261885 [Vitis vinifera]
          Length = 2338

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 244/492 (49%), Gaps = 52/492 (10%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G  I+ +P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 1088 LCLKGQPISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFP 1145

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +I+ +ME+L +L+L+ T+I E+PSSIE L  LE+L L  CK LV LP SI  L  L+ L+
Sbjct: 1146 EILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLD 1205

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
            +S C KL  +P  LG+++SL+ L   G  +      S+  + +L++L   G         
Sbjct: 1206 VSYCSKLHKLPQNLGRLQSLKHLCACGLNSTCCQLVSLLGLCSLKNLILPG--------- 1256

Query: 189  WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                        S     ++L  +  + SL  LDLS C + E  IP++I +L SL+ L+L
Sbjct: 1257 ------------SKLMQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSSLQHLHL 1304

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
            + N F ++P+ ++ L  L  L L  C+ L+ +P +P +L+ +  + C  L T  G L   
Sbjct: 1305 SGNLFRSIPSGVNQLSMLRILNLGHCQELRQIPALPSSLRVLDVHECPWLETSSGLL--- 1361

Query: 309  RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS-QIPKWFMYQN 367
                ++ NC  SL       +     R Y      +    +++++  GS  IPKW  +  
Sbjct: 1362 --WSSLFNCFKSL-------IQDFECRIYPRDSLFA----RVNLIISGSCGIPKWISHHK 1408

Query: 368  EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD-GSGEGH 426
            +G+ +    P   Y  N ++GF +  ++    + +   L +   A  L+CS+   + E  
Sbjct: 1409 KGAKVVAKLPENWYKNNDLLGFVLYSLYDPLDNESEETLEND--AAYLKCSLTLRAHESQ 1466

Query: 427  YI----YFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIR---LSFRSISD-PTWKVKRC 478
            ++    ++     + V   +W+++  +     ++ SN  R    SF   S     KV+ C
Sbjct: 1467 FVDELQFYPSFRCYDVVPKMWMIYYAKVVIEKKYHSNKWRQLTASFCGFSHGKAMKVEEC 1526

Query: 479  GFHPIYMHEVEE 490
            G H IY H+ E+
Sbjct: 1527 GIHLIYAHDHEK 1538



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 196/433 (45%), Gaps = 69/433 (15%)

Query: 80   KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            KL L G +I+ +P  IE     + L L ECKNL  LP+SI   KSLK+L  S C +L+  
Sbjct: 1877 KLCLKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYF 1934

Query: 140  PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC------------NEPPASA 187
            P+ L  +E+L EL ++ TAI+   SSI  +  L  L    C             +P  +A
Sbjct: 1935 PEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLLLFKTPQIATKPREAA 1994

Query: 188  SWH----LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                   L L FN+L     P+A  +                 G+ E  IP++I +L SL
Sbjct: 1995 KLEASPCLWLKFNML-----PIAFFV-----------------GIDEGGIPTEICHLSSL 2032

Query: 244  KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
            ++L L  N F ++P+ ++ L  L  L+L  C+ L+ +P +P +L+ +  + C+ L T  G
Sbjct: 2033 RQLLLTGNLFRSIPSGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHECTRLETSSG 2092

Query: 304  ALKLCRSKYTIINCIDSLKLLRKNGLAISMLREY-LELQAVSDPGHKLSIVFPGS-QIPK 361
             L       ++ NC  SL            ++++   +    +   ++ ++  GS  IPK
Sbjct: 2093 LLW-----SSLFNCFKSL------------IQDFECRIYPRENRFARVHLIISGSCGIPK 2135

Query: 362  WFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDG 421
            W  +  +G+ +    P   Y  N ++GF +  ++  P  +       +Y A  L+C +  
Sbjct: 2136 WISHHKKGAKVVAELPENWYKNNDLLGFVLYSLYD-PLDNESEETLENY-ATSLKCGL-- 2191

Query: 422  SGEGHYIYFRGKFGHVV---SDHLWLLFLPRHGHNWQFESN---LIRLSFRSISDPTWKV 475
            +   H   F  +    +   S  + +   P+   N Q+ SN    ++ SFRS      +V
Sbjct: 2192 TLRAHESQFVDELRCRICGESSQMCVTCYPKVAINNQYWSNEWRRLKASFRSFDGTPVEV 2251

Query: 476  KRCGFHPIYMHEV 488
            K  GFH IY  +V
Sbjct: 2252 KEWGFHLIYTGDV 2264



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 2/122 (1%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            A ++    L L G++I E+P+ IE     + L L+ CKNL  LP +I  LK L TL  SG
Sbjct: 1554 ADVQSRRKLCLKGSAINELPT-IECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSG 1612

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPSSIN 120
            CS+L+ FP+I+  +E+L  L+LDGT+I E+P+SI+ L GL+ L L +C NL ++   S N
Sbjct: 1613 CSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNLDLKHEKSSN 1672

Query: 121  GL 122
            G+
Sbjct: 1673 GV 1674



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 100/190 (52%), Gaps = 19/190 (10%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L G +I+ +P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 1878 LCLKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFP 1935

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV--RLPSSINGLKSLKT 127
            +I+ +ME+L +L+L+ T+I E+PSSIE L  LE+L L+ C+NL+  + P      +    
Sbjct: 1936 EILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLLLFKTPQIATKPREAAK 1995

Query: 128  LNLSGCCKLE---------------NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
            L  S C  L+                +P  +  + SL +L ++G   R   S +  +  L
Sbjct: 1996 LEASPCLWLKFNMLPIAFFVGIDEGGIPTEICHLSSLRQLLLTGNLFRSIPSGVNQLSML 2055

Query: 173  RSLYFSGCNE 182
            R L    C E
Sbjct: 2056 RLLDLGHCQE 2065



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 60/99 (60%), Gaps = 1/99 (1%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+ I EL   IE       L L  CKNLERLP +I  LK L+TLN SG S+ R FPEI  
Sbjct: 1566 GSAINELP-TIECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSFPEILE 1624

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
              + L  +HL+GTAI+ LPASI+ L G    NL DC NL
Sbjct: 1625 DVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNL 1663



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 76/129 (58%)

Query: 675  LAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
            L IE       L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L E+
Sbjct: 1098 LPIEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLREL 1157

Query: 735  HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            HL  TAI+ LP+SIE L+   + NL+ CK L +LP +I  L  L ++  S CSKL  + +
Sbjct: 1158 HLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLDVSYCSKLHKLPQ 1217

Query: 795  TLGKVESLE 803
             LG+++SL+
Sbjct: 1218 NLGRLQSLK 1226



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 19/193 (9%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +M++L +L+L+ T+I E+PSSIE L  LE+L L+GCK L +LP +I +L  L  L++S
Sbjct: 1148 LENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEVLDVS 1207

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP---- 116
             CSKL K PQ +  ++ L  L   G +     +  +L   + LL L   KNL+ LP    
Sbjct: 1208 YCSKLHKLPQNLGRLQSLKHLCACGLN----STCCQL---VSLLGLCSLKNLI-LPGSKL 1259

Query: 117  ------SSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
                  S I  L SL+ L+LS C   E  +P  +  + SL+ L +SG   R   S +  +
Sbjct: 1260 MQGVVLSDICCLYSLEVLDLSFCRIDEGGIPTEICHLSSLQHLHLSGNLFRSIPSGVNQL 1319

Query: 170  KNLRSLYFSGCNE 182
              LR L    C E
Sbjct: 1320 SMLRILNLGHCQE 1332



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 1/108 (0%)

Query: 73   ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
            A ++   KL L G++I E+P+ IE     + L L ECKNL RLPSSI  LKSL TLN SG
Sbjct: 1554 ADVQSRRKLCLKGSAINELPT-IECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSG 1612

Query: 133  CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            C +L + P+ L  VE+L  L + GTAI+   +SI  ++ L+ L  + C
Sbjct: 1613 CSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADC 1660



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 6/124 (4%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           L  L  + L   + L  LP   S++  L  L LSGC  L K     +++  L +L LD T
Sbjct: 624 LRNLRRINLSDSQQLIELP-NFSNVPNLEELILSGCIILLK-----SNIAKLEELCLDET 677

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           +I E+PSSIELL GL  L L+ CKNL  LP+SI  L+ L  L+L GC KL+ +P+ L ++
Sbjct: 678 AIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRLPEDLERM 737

Query: 147 ESLE 150
             LE
Sbjct: 738 PCLE 741



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 117/271 (43%), Gaps = 49/271 (18%)

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGCSSLVTLFGALKLC 308
            N   LP+SI  L +L  L    C RL+S P+I     NL+ +  +G +++  L  +++  
Sbjct: 1591 NLERLPSSICELKSLTTLNCSGCSRLRSFPEILEDVENLRNLHLDG-TAIKELPASIQYL 1649

Query: 309  RSKYTIINCIDSLKLLRK-----NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKW 362
            R     +N  D   L  K     NG+ +    +Y+        G  + IV PGS  IPKW
Sbjct: 1650 RG-LQCLNLADCTNLDLKHEKSSNGVFLPN-SDYI--------GDGICIVVPGSSGIPKW 1699

Query: 363  FMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-------QVPKHSTGTYL--------- 406
               Q EG  IT+  P   Y  +  +G AICCV+        +P++     L         
Sbjct: 1700 IRNQREGYRITMELPQNCYENDDFLGIAICCVYAPLDECEDIPENDFAHTLENESDDLLE 1759

Query: 407  FHSYPAHELECSM---DGSGEG----HYIYFRG--KFGHV--VSDHLWLLFLPRHGHNWQ 455
              S  + EL+C +   +G G       ++ FR   K  H   VS+ +W++F P+      
Sbjct: 1760 AESSISTELQCQLSLSEGYGSSSLCVRHLSFRSTCKCYHNGGVSEQMWVIFYPKAAILES 1819

Query: 456  FESNLIRLSFRSISDPT--WKVKRCGFHPIY 484
              +N       +  DP   +KV +CG  PIY
Sbjct: 1820 GPTNPFMYLAATFKDPQSHFKVLKCGLQPIY 1850



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 48/74 (64%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +++  L +L LD T+I E+PSSIELL GL  L L  CKNL  LP +I +L+ L  L L G
Sbjct: 664 SNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEG 723

Query: 62  CSKLKKFPQIVASM 75
           CSKL + P+ +  M
Sbjct: 724 CSKLDRLPEDLERM 737



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 100/249 (40%), Gaps = 75/249 (30%)

Query: 630 KWGRQTVRRQSPQEPGNCSRLWEEADEFPDI----------------------------- 660
           + G+  V ++ P EPG  SRLW   D +  +                             
Sbjct: 495 QMGKGIVDQECPNEPGERSRLWRHIDIYRVLKRNTGTEKIEGIYLHVDKSEQIQFTSKAF 554

Query: 661 -----VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA------------ 703
                +++LS   +  +LS      + L  L  NG  +LE LP    A            
Sbjct: 555 ERMHRLRLLSISHNHVQLSKDFVFPYDLTYLRWNG-YSLESLPSNFHANNLVSLILGNSN 613

Query: 704 ----------LKYLSTLNLSGLSKFREFPEIT------------------SSRDQLLEIH 735
                     L+ L  +NLS   +  E P  +                  S+  +L E+ 
Sbjct: 614 IKLLWKGNMCLRNLRRINLSDSQQLIELPNFSNVPNLEELILSGCIILLKSNIAKLEELC 673

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L+ TAI+ LP+SIELL G    NL +CKNL+ LP++I  LR L ++   GCSKL  + E 
Sbjct: 674 LDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRLPED 733

Query: 796 LGKVESLEV 804
           L ++  LE+
Sbjct: 734 LERMPCLEL 742



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 52/91 (57%)

Query: 675  LAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
            L IE       L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L E+
Sbjct: 1888 LPIEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLREL 1947

Query: 735  HLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            HL  TAI+ LP+SIE L+   + NL  C+NL
Sbjct: 1948 HLNETAIKELPSSIEHLNRLEVLNLDRCENL 1978



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 20/154 (12%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLE 58
            + +M++L +L+L+ T+I E+PSSIE L  LE+L L  C+N  L   P   +  +    LE
Sbjct: 1938 LENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENLLLFKTPQIATKPREAAKLE 1997

Query: 59   LSGCSKLK---------------KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
             S C  LK                 P  +  +  L +L L G     +PS +  L  L L
Sbjct: 1998 ASPCLWLKFNMLPIAFFVGIDEGGIPTEICHLSSLRQLLLTGNLFRSIPSGVNQLSMLRL 2057

Query: 104  LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
            L L  C+ L ++P+  +   SL+ L++  C +LE
Sbjct: 2058 LDLGHCQELRQIPALPS---SLRVLDVHECTRLE 2088



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 736  LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            L+G+AI  LP     L  + L  L++CKNL+ LPS+I  L+SL  +  SGCS+L++  E 
Sbjct: 1564 LKGSAINELPTIECPLEFDSLC-LRECKNLERLPSSICELKSLTTLNCSGCSRLRSFPEI 1622

Query: 796  LGKVESL 802
            L  VE+L
Sbjct: 1623 LEDVENL 1629



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 66/177 (37%), Gaps = 46/177 (25%)

Query: 350  LSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGT---Y 405
            + IV PGS  IPKW   Q EG  IT+  P   Y  +  +G AIC V+        T   Y
Sbjct: 889  ICIVVPGSSGIPKWIRNQTEGYHITMGLPQNCYENDDFLGIAICSVYAPIYECEDTPENY 948

Query: 406  LFHSYP---------------------AHELECSM---DGSGEGHYIYFRGKFGHV---- 437
              H+                       + +L+C +   +G G          F       
Sbjct: 949  FAHTLENPSGDEVLNEDDDLLEAESSISTKLQCQLSLSEGYGSSSLCVRHLSFCSTCKCY 1008

Query: 438  ----VSDHLWLLFLPRHG-----HNWQF-ESNLIRLSFRSISDPTWKVKRCGFHPIY 484
                VS  +W++F P+       H  +F   N + +  R+     +KV +CG  PIY
Sbjct: 1009 HNGGVSGQMWVIFYPKAAILESCHTNRFMHLNAVFIDSRN----HFKVLKCGLQPIY 1061



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 30/41 (73%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL 41
            +  +++L +L+LDGT+I E+P+SI+ L GL+ L L  C NL
Sbjct: 1623 LEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNL 1663



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 8/153 (5%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           DL+ L  +G S+  +PS+      + L+   G  N+  L      L+ LR + LS   +L
Sbjct: 581 DLTYLRWNGYSLESLPSNFHANNLVSLIL--GNSNIKLLWKGNMCLRNLRRINLSDSQQL 638

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            + P   +++ +L +L L G  I  + S+I     LE L L+E   +  LPSSI  L+ L
Sbjct: 639 IELPNF-SNVPNLEELILSGCIIL-LKSNI---AKLEELCLDETA-IKELPSSIELLEGL 692

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           + LNL  C  LE +P+++  +  L  L + G +
Sbjct: 693 RYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCS 725



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           LP+ + V +L +L LS C +   +      N+  L+EL L+      LP+SI  L  L  
Sbjct: 641 LPNFSNVPNLEELILSGCIILLKS------NIAKLEELCLDETAIKELPSSIELLEGLRY 694

Query: 269 LELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           L L++CK L+ LP    NL+F+      GCS L  L
Sbjct: 695 LNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRL 730



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 7/74 (9%)

Query: 657  FPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            FP+I++ + +        T I+EL  +IE L  L  L L GCK L  LP +I  L +L  
Sbjct: 1144 FPEILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESICNLCFLEV 1203

Query: 710  LNLSGLSKFREFPE 723
            L++S  SK  + P+
Sbjct: 1204 LDVSYCSKLHKLPQ 1217



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 736  LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            L+G  I  LP  IE  S      L++CKNL+SLP++I   +SL+ ++ S CS+L+   E 
Sbjct: 1880 LKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEI 1937

Query: 796  LGKVESL 802
            L  +E+L
Sbjct: 1938 LENMENL 1944


>gi|296081086|emb|CBI18280.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 165/507 (32%), Positives = 239/507 (47%), Gaps = 103/507 (20%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
            + + + E+P  IE    L+ L L+GCK L SLP +I   K L TL   GCS+L+ FP+I
Sbjct: 229 FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 287

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           +  ME L KL L G++I E+PSSI+ L GL+ L L  CKNLV LP SI  L SLKTL + 
Sbjct: 288 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 347

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            C +L+ +P+ LG+++SLE               I  +K+  S+                
Sbjct: 348 SCPELKKLPENLGRLQSLE---------------ILYVKDFDSM---------------- 376

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                            LPSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N
Sbjct: 377 --------------NCQLPSLSGLCSLRILRLINCGLRE--IPSGICHLTSLQCLVLMGN 420

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
            F + P  IS L  L  L L  CK LQ +P+ P NL  + A+ C+S       LK+  S 
Sbjct: 421 QFSSKPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLITLVAHQCTS-------LKISSS- 472

Query: 312 YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF-PGSQ-IPKWFMYQNEG 369
                       L  +    S +++++       PG KL   F P S  IP+W  +Q +G
Sbjct: 473 ------------LLWSPFFKSGIQKFV-------PGVKLLDTFIPESNGIPEWISHQKKG 513

Query: 370 SSITVTRPSYLYNVNKVVGFAICCVFQVP-----------KHSTGTYLFHSYPAHELECS 418
           S IT+T P   Y  +  +GFA+ C   VP           ++      F++ P+  +   
Sbjct: 514 SKITLTLPQNWYENDDFLGFAL-CSLHVPLDIEWRDIDESRNFICKLNFNNNPSLVVR-- 570

Query: 419 MDGSGEGHYIYFRGKFGHVVSDHLWLL-----FLPRHGHNWQFESNLIRLSFRSISD-PT 472
            D     H    R       S+ LWL+      +P   H+ ++ +  +  SF++  D  +
Sbjct: 571 -DIQSRRHCQICRDG---DESNQLWLIKIAKSMIPNIYHSNKYRT--LNASFKNDFDTKS 624

Query: 473 WKVKRCGFHPIYMHEVEEFDETTKQST 499
            KV+RCGF  +Y  +  +   T  Q +
Sbjct: 625 VKVERCGFQLLYAQDCGQNHLTIVQGS 651



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           + +D++EL + IE    L  L L GCK L+ LP +I   K L+TL   G S+   FPEI 
Sbjct: 230 EDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEIL 288

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
              + L ++ L G+AI+ +P+SI+ L G    NL  CKNL +LP +I  L SL+ +    
Sbjct: 289 EDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKS 348

Query: 786 CSKLKNVTETLGKVESLEV 804
           C +LK + E LG+++SLE+
Sbjct: 349 CPELKKLPENLGRLQSLEI 367



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 3/156 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+ L  L L G++I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+TL + 
Sbjct: 288 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 347

Query: 61  GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C +LKK P+ +  ++ L  LY+ D  S+     S+  L  L +L L  C  L  +PS I
Sbjct: 348 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQLPSLSGLCSLRILRLINC-GLREIPSGI 406

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
             L SL+ L L G  +  + PD + ++  L  L++S
Sbjct: 407 CHLTSLQCLVLMG-NQFSSKPDGISQLHKLIVLNLS 441


>gi|224131070|ref|XP_002328446.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838161|gb|EEE76526.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1272

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 243/531 (45%), Gaps = 71/531 (13%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  +K L  LYL G S +  +P SI  L  L+ L L+GC  L++LP +I  LK L +L L
Sbjct: 754  IGELKSLDSLYLGGCSGLATLPDSIGELKSLDSLYLRGCSGLATLPDSIGELKSLDSLYL 813

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTS----------IAEVPSSIELLPGLELLYLNEC 109
             GCS L   P  +  ++ L  LYL G S          +A +P SI  L  L  LYL+ C
Sbjct: 814  GGCSGLASLPNSIGELKSLDSLYLRGCSGLASLPDSIGLASLPDSIGELKSLIWLYLSSC 873

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
              L  LP SI  LKSL  L L GC +L  +P+ +G+++SL++L + G +           
Sbjct: 874  LGLESLPDSICELKSLSYLYLQGCSRLATLPNKIGELKSLDKLCLEGCS----------- 922

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
              L SL  + C+   +  +  ++L F  L K  C +      L+G   + ++ LS   LG
Sbjct: 923  -GLASLPNNICSGLASLPNNIIYLEFRGLDKQCCYM------LSGFQKVEEIALSTNKLG 975

Query: 230  -----------EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
                           P  + +L SL +L L++ +F  +PASI  L +L  L L+DCK LQ
Sbjct: 976  CHEFLNLENSRVLKTPESLGSLVSLTQLTLSKIDFERIPASIKHLTSLHNLYLDDCKWLQ 1035

Query: 279  SLPQIPPNLQFVRANGCSSLVTLFGAL-------KLCRSKYTIINCIDSLKLLRKNGLAI 331
             LP++P  LQ + A+GC SL ++           K    ++    C+   +  R   +  
Sbjct: 1036 CLPELPLTLQVLIASGCISLKSVASIFMQGDREYKAASQEFNFSECLQLDQNSRTRIMGA 1095

Query: 332  SMLR------EYLELQAVSDPGHKLSIVFPGSQIPKWFMYQN-EGSSITVTRPSYLYNVN 384
            + LR          L+    P  ++ +  PGS++P+WF Y+N EGSS+ + +P+  +   
Sbjct: 1096 ARLRIQRMATSLFSLEYHGKPLKEVRLCIPGSEVPEWFSYKNREGSSVKIWQPAQWHR-- 1153

Query: 385  KVVGFAICCVFQVPKHSTGTYLFHSYPAH-ELECSMDGSGEGHYIYFRGKFGHVVSDHLW 443
               GF  C V    ++          P + + EC +  S +G  I     +  +  + + 
Sbjct: 1154 ---GFTFCAVVSFGQNE------ERRPVNIKCECHLI-SKDGTQIDLSSYYYELYEEKVR 1203

Query: 444  LLFLPRHGHNWQFESNLI----RLSFRSISDPTWKVKRCGFHPIYMHEVEE 490
             L+   H   W   S          F+S    +  V  CG HP+ ++E E+
Sbjct: 1204 SLWEREHVFIWSVHSKCFFKEASFQFKSPWGASDVVVGCGVHPLLVNEPEQ 1254



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/295 (36%), Positives = 153/295 (51%), Gaps = 20/295 (6%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D + +  +P+SI  L  L  L LKGC  L++LP +I  LK L +L L  CS L   P  +
Sbjct: 647 DCSGLASLPNSIGELKSLTKLNLKGCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSI 706

Query: 73  ASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             ++ L  LYL G S +A +P SI  L  L+ LYL  C  L  LP SI  LKSL +L L 
Sbjct: 707 GELKSLDSLYLGGCSGLATLPESIGELKSLDSLYLRGCSGLASLPDSIGELKSLDSLYLG 766

Query: 132 GCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
           GC  L  +PD++G+++SL+ L + G + +     SI  +K+L SLY  GC+   +     
Sbjct: 767 GCSGLATLPDSIGELKSLDSLYLRGCSGLATLPDSIGELKSLDSLYLGGCSGLAS----- 821

Query: 191 LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
             LP N +G+     +L L   +G+ SL         +G A++P  I  L SL  LYL+ 
Sbjct: 822 --LP-NSIGELKSLDSLYLRGCSGLASLPD------SIGLASLPDSIGELKSLIWLYLSS 872

Query: 251 N-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
                +LP SI  L +L  L L+ C RL +LP     L+ +      GCS L +L
Sbjct: 873 CLGLESLPDSICELKSLSYLYLQGCSRLATLPNKIGELKSLDKLCLEGCSGLASL 927



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 5/163 (3%)

Query: 646 NCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
            CSRL    D   ++  +    L D + +  L  +I  L  L  L L GC  L  LP +I
Sbjct: 671 GCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSIGELKSLDSLYLGGCSGLATLPESI 730

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK 760
             LK L +L L G S     P+       L  ++L G + +  LP SI  L       L+
Sbjct: 731 GELKSLDSLYLRGCSGLASLPDSIGELKSLDSLYLGGCSGLATLPDSIGELKSLDSLYLR 790

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            C  L +LP +I  L+SL  +Y  GCS L ++  ++G+++SL+
Sbjct: 791 GCSGLATLPDSIGELKSLDSLYLGGCSGLASLPNSIGELKSLD 833



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 2/157 (1%)

Query: 649 RLWEEADEFP-DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LW E   +         D + +  L  +I  L  L +L L GC  L  LP +I  LK L
Sbjct: 629 QLWNEGQTYHIRAFHHSKDCSGLASLPNSIGELKSLTKLNLKGCSRLATLPDSIGELKSL 688

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLK 766
            +L L   S     P+       L  ++L G + +  LP SI  L       L+ C  L 
Sbjct: 689 DSLYLKDCSGLATLPDSIGELKSLDSLYLGGCSGLATLPESIGELKSLDSLYLRGCSGLA 748

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           SLP +I  L+SL  +Y  GCS L  + +++G+++SL+
Sbjct: 749 SLPDSIGELKSLDSLYLGGCSGLATLPDSIGELKSLD 785



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 10/138 (7%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L L GC  L  LP +I  LK L +L L G S     P        L  ++
Sbjct: 777 SIGELKSLDSLYLRGCSGLATLPDSIGELKSLDSLYLGGCSGLASLPNSIGELKSLDSLY 836

Query: 736 LEG----------TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           L G            +  LP SI  L   I   L  C  L+SLP +I  L+SL  +Y  G
Sbjct: 837 LRGCSGLASLPDSIGLASLPDSIGELKSLIWLYLSSCLGLESLPDSICELKSLSYLYLQG 896

Query: 786 CSKLKNVTETLGKVESLE 803
           CS+L  +   +G+++SL+
Sbjct: 897 CSRLATLPNKIGELKSLD 914



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 10/127 (7%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE---ITSSRDQLL 732
           +I  L  L  L L GC  L  LP +I  LK L +L L G S     P+   + S  D + 
Sbjct: 801 SIGELKSLDSLYLGGCSGLASLPNSIGELKSLDSLYLRGCSGLASLPDSIGLASLPDSIG 860

Query: 733 EI------HLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           E+      +L     +  LP SI  L       L+ C  L +LP+ I  L+SL  +   G
Sbjct: 861 ELKSLIWLYLSSCLGLESLPDSICELKSLSYLYLQGCSRLATLPNKIGELKSLDKLCLEG 920

Query: 786 CSKLKNV 792
           CS L ++
Sbjct: 921 CSGLASL 927


>gi|332330340|gb|AEE43926.1| TIR-NBS-LRR resistance protein muRdr1B [Rosa multiflora]
          Length = 1157

 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 173/544 (31%), Positives = 270/544 (49%), Gaps = 64/544 (11%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L   I  L  L+++ LS    L + P     + +L KL L+G T++ ++  SI LL
Sbjct: 616  NIDHLWNGIKYLGNLKSIVLSYSINLIRTPDFTG-IPNLEKLVLEGCTNLVKIHPSIALL 674

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L++     CK++  LPS +N ++ L+T ++SGC KL+ +P+ +G+ + L +L + GTA
Sbjct: 675  KRLKIWNFRNCKSIKTLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRLSKLCLGGTA 733

Query: 159  IRRPTSSI-FLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPS 211
            + +  SSI  L ++L  L  SG    E P S     ++  + LG    KS  P+  +L S
Sbjct: 734  VEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLAS 793

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L    SL +L+L+DC L E  IP+DI +L SL+ L L  NNFV+LPASI  L  L  + +
Sbjct: 794  LKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGSINV 853

Query: 272  EDCKRLQSLPQIP--PNLQFVRANGCSSLVTLFGAL--KLCR-SKYTI--INCIDSLKLL 324
            E+CKRLQ LP++P   +L+    N C+SL  +F  L   LCR S +++  +NC+ ++   
Sbjct: 854  ENCKRLQQLPELPVSGSLRVTTVN-CTSL-QVFPELPPDLCRLSAFSLNSVNCLSTIGNQ 911

Query: 325  RKNGLAISMLREYLELQAVSDPGHK------------------------------LSIVF 354
              +    S++   LE+  V+                                   L+ + 
Sbjct: 912  DASFFLYSVINRLLEVTYVTYVRSLSLSLSLSLSLSLSLSLSLSRSLETHLSFEFLNFLI 971

Query: 355  PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHE 414
            PGS+IP+WF  Q+ G S+T   P    N +K +GFA+C +  VP+ +         P  +
Sbjct: 972  PGSEIPEWFNNQSAGDSVTEKLPWDACN-SKWIGFAVCALI-VPQDNPSA--VPEDPDLD 1027

Query: 415  LECSMDGSGEGHY----IYFRGK-FGHVVSDHLWLLFLP---RHGHNWQFESNLIRLSFR 466
             +  +      +Y    +  RG       SDHLWLL LP   R   N + E N +  + R
Sbjct: 1028 PDTCLISCNWSNYGINGVVGRGLCVRQFDSDHLWLLVLPSPFRKPKNCR-EVNFVFQTAR 1086

Query: 467  SI-SDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASG 525
            ++ ++   KVK+CG   +Y  + EE      QS + +S +L E   D     M  A  SG
Sbjct: 1087 AVGNNRCMKVKKCGVRALYEQDTEELISKMNQS-KSSSVSLYEEAMDEQEGAMVKAATSG 1145

Query: 526  SGSS 529
            SG S
Sbjct: 1146 SGGS 1149



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 40/226 (17%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G T++ ++  SI LL  L++   + CK++ +LP  + +++ L T ++
Sbjct: 647 FTGIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKTLPSEV-NMEFLETFDV 705

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP----GLEL-----------L 104
           SGCSKLK  P+ V   + LSKL L GT++ ++PSSIE L     GL+L           L
Sbjct: 706 SGCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSL 765

Query: 105 YLNE--------------CKNLVRLPSSINGLKSLKTLNLSGC--CKLENVPDTLGKVES 148
           +L +                 L+ + +S+    SLK LNL+ C  C+ E +P+ +G + S
Sbjct: 766 FLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGE-IPNDIGSLSS 824

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN------EPPASAS 188
           LE L++ G       +SI L+  L S+    C       E P S S
Sbjct: 825 LECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPELPVSGS 870



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG S
Sbjct: 651 PNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKTLPSEVN-MEFLETFDVSGCS 709

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE      +L ++ L GTA+  LP+SIE LS +++
Sbjct: 710 KLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLV 749



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I  L  L ++ LS        P+ T   + L ++ LEG T +  +  SI LL
Sbjct: 616 NIDHLWNGIKYLGNLKSIVLSYSINLIRTPDFTGIPN-LEKLVLEGCTNLVKIHPSIALL 674

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               + N ++CK++K+LPS +N +  L     SGCSKLK + E +G+ + L
Sbjct: 675 KRLKIWNFRNCKSIKTLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRL 724



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 34/172 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLT----GLEL-----------LTLKGCKNLSSLP 45
           +   K LS L L GT++ ++PSSIE L+    GL+L           L LK     SSL 
Sbjct: 718 VGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLG 777

Query: 46  V-----------TISSLK---CLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAE 90
           +            ++SLK    L+ L L+ C+  + + P  + S+  L  L L G +   
Sbjct: 778 LFPRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVS 837

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPS-SINGLKSLKTLNLSGCCKLENVPD 141
           +P+SI LL  L  + +  CK L +LP   ++G   + T+N   C  L+  P+
Sbjct: 838 LPASIHLLCRLGSINVENCKRLQQLPELPVSGSLRVTTVN---CTSLQVFPE 886



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 38/208 (18%)

Query: 623 GCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFG 682
           G     ++ G + VR+QSP+EPG CSRLW       DI  V +  T       AIE +F 
Sbjct: 492 GMHDLIREMGCEIVRQQSPEEPGGCSRLWLRN----DIFHVFTKNTGTE----AIEGIF- 542

Query: 683 LVQLTLNGCKNLERLPRTIS-----ALKYLSTLNLS----------GLSKFREFPEIT-- 725
              L L+  +  +  P   S      L Y+  L LS           + K+  +P  +  
Sbjct: 543 ---LHLHKLEGADWNPEAFSKMCNLKLLYIHNLRLSLGPKSLPDALRILKWSWYPLKSLP 599

Query: 726 --SSRDQLLEIHLEGTAIRGLPASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMY 782
                D+L E+    + I  L   I+ L GN+ S  L    NL   P    G+ +L  + 
Sbjct: 600 PGFQPDELTELSFVHSNIDHLWNGIKYL-GNLKSIVLSYSINLIRTPD-FTGIPNLEKLV 657

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSSWN 810
             GC+ L  +  ++    +L  RL  WN
Sbjct: 658 LEGCTNLVKIHPSI----ALLKRLKIWN 681


>gi|332330345|gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 169/520 (32%), Positives = 266/520 (51%), Gaps = 54/520 (10%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            L+++ LS    L + P     + +L KL L+G T++ ++  SI LL  L++     CK++
Sbjct: 624  LKSIVLSYSINLIRTPDFTG-IPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSI 682

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-FLMKN 171
              LPS +N ++ L+T ++SGC KL+ +P+ +G+ + L +L + GTA+ +  SSI  L ++
Sbjct: 683  KTLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSES 741

Query: 172  LRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPSLTGVCSLTKLDLSD 225
            L  L  SG    E P S     ++  + LG    KS  P+  +L SL    SL +L+L+D
Sbjct: 742  LVGLDLSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLKELNLND 801

Query: 226  CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP- 284
            C L E  IP+DI +L SL+ L L  NNFV+LPASI  L  L  + +E+CKRLQ LP++P 
Sbjct: 802  CNLCEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPELPV 861

Query: 285  -PNLQFVRANGCSSLVTLFGAL--KLCR-SKYTI--INCIDSLKLLRKNGLAISMLREYL 338
              +L+    N C+SL  +F  L   LCR S +++  +NC+ ++     +    S++   L
Sbjct: 862  SGSLRVTTVN-CTSL-QVFPELPPDLCRLSAFSLNSVNCLSTIGNQDASFFLYSVINRLL 919

Query: 339  ELQAVSDPGHK--------------------LSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
            E+ ++S                         L+ + PGS+IP+WF  Q+ G S+T   P 
Sbjct: 920  EVISLSLSLSLSLSLSLSLSRSLETHLSFEFLNFLIPGSEIPEWFNNQSAGDSVTEKLPW 979

Query: 379  YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY----IYFRGK- 433
               N +K +GFA+C +  VP+ +         P  + +  +      +Y    +  RG  
Sbjct: 980  DACN-SKWIGFAVCALI-VPQDNPSA--VPEDPDLDPDTCLISCNWSNYGINGVVGRGLC 1035

Query: 434  FGHVVSDHLWLLFLP---RHGHNWQFESNLIRLSFRSI-SDPTWKVKRCGFHPIYMHEVE 489
                 SDHLWLL LP   R   N + E N +  + R++ ++   KVK+CG   +Y  + E
Sbjct: 1036 VRQFDSDHLWLLVLPSPFRKPKNCR-EVNFVFQTARAVGNNRCMKVKKCGVRALYEQDTE 1094

Query: 490  EFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSS 529
            E      QS + +S +L E   D     M  A  SGSG S
Sbjct: 1095 ELISKMNQS-KSSSVSLYEEAMDEQEGAMVKAATSGSGGS 1133



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 40/226 (17%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G T++ ++  SI LL  L++   + CK++ +LP  ++ ++ L T ++
Sbjct: 641 FTGIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKTLPSEVN-MEFLETFDV 699

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP----GLEL-----------L 104
           SGCSKLK  P+ V   + LSKL L GT++ ++PSSIE L     GL+L           L
Sbjct: 700 SGCSKLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSL 759

Query: 105 YLNE--------------CKNLVRLPSSINGLKSLKTLNLSGC--CKLENVPDTLGKVES 148
           +L +                 L+ + +S+    SLK LNL+ C  C+ E +P+ +G + S
Sbjct: 760 FLKQNVIASSLGLFPRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGE-IPNDIGSLSS 818

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN------EPPASAS 188
           LE L++ G       +SI L+  L S+    C       E P S S
Sbjct: 819 LECLELGGNNFVSLPASIHLLCRLGSINVENCKRLQQLPELPVSGS 864



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 93/234 (39%), Gaps = 60/234 (25%)

Query: 623 GCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGT-------------D 669
           G     ++ G + VR+QSP+EPG CSRLW   D    I  V +  T              
Sbjct: 491 GMHDLIREMGCEIVRQQSPEEPGGCSRLWLRND----IFHVFTKNTGTEAIEGIFLHLHK 546

Query: 670 IRELSLAIELLFGLVQLTLNGCKNL------ERLPRTISALKY----------------- 706
           + E     E    +  L L    NL      + LP  +  LK+                 
Sbjct: 547 LEEADWNPEAFSKMCNLKLLYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPDEL 606

Query: 707 -----------------LSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASI 748
                            L ++ LS        P+ T   + L ++ LEG T +  +  SI
Sbjct: 607 SFVHSNIDHLWNGILGHLKSIVLSYSINLIRTPDFTGIPN-LEKLVLEGCTNLVKIHPSI 665

Query: 749 ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LL    + N ++CK++K+LPS +N +  L     SGCSKLK + E +G+ + L
Sbjct: 666 ALLKRLKIWNFRNCKSIKTLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRL 718



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG S
Sbjct: 645 PNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKTLPSEVN-MEFLETFDVSGCS 703

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE      +L ++ L GTA+  LP+SIE LS +++
Sbjct: 704 KLKMIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLV 743



 Score = 43.5 bits (101), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 34/172 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLT----GLEL-----------LTLKGCKNLSSLP 45
           +   K LS L L GT++ ++PSSIE L+    GL+L           L LK     SSL 
Sbjct: 712 VGQTKRLSKLCLGGTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLG 771

Query: 46  V-----------TISSLK---CLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAE 90
           +            ++SLK    L+ L L+ C+  + + P  + S+  L  L L G +   
Sbjct: 772 LFPRKSHHPLIPVLASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVS 831

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPS-SINGLKSLKTLNLSGCCKLENVPD 141
           +P+SI LL  L  + +  CK L +LP   ++G   + T+N   C  L+  P+
Sbjct: 832 LPASIHLLCRLGSINVENCKRLQQLPELPVSGSLRVTTVN---CTSLQVFPE 880


>gi|147799119|emb|CAN61627.1| hypothetical protein VITISV_024719 [Vitis vinifera]
          Length = 1520

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 232/494 (46%), Gaps = 101/494 (20%)

Query: 12   LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
             + + + E+P  IE    L+ L L+GCK L SLP +I   K L TL   GCS+L+ FP+I
Sbjct: 1055 FEDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEI 1113

Query: 72   VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            +  ME L KL L G++I E+PSSI+ L GL+ L L  CKNLV LP SI  L SLKTL + 
Sbjct: 1114 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1173

Query: 132  GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             C +L+ +P+ LG+++SLE               I  +K+  S+                
Sbjct: 1174 SCPELKKLPENLGRLQSLE---------------ILYVKDFDSM---------------- 1202

Query: 192  HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                      +C      PSL+G+CSL  L L +CGL E  IPS I +L SL+ L L  N
Sbjct: 1203 ----------NC----QXPSLSGLCSLRILRLINCGLRE--IPSGICHLTSLQCLVLMGN 1246

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
             F ++P  IS L  L  L L  CK LQ +P+ P NL  + A+ C+SL     +  L  S 
Sbjct: 1247 QFSSIPDGISQLHKLIVLNLSHCKLLQHIPEPPSNLXTLVAHQCTSLKI---SSSLLWSP 1303

Query: 312  YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGS 370
            +             K+G           +Q        L    P S  IP+W  +Q +GS
Sbjct: 1304 FF------------KSG-----------IQKFVPXXKXLDTFIPESNGIPEWISHQKKGS 1340

Query: 371  SITVTRPSYLYNVNKVVGFAICCVFQVP-----------KHSTGTYLFHSYPAHELECSM 419
             IT+T P   Y  +  +GFA+C +  VP           ++      F++ P+  +    
Sbjct: 1341 KITLTLPQNWYENDDFLGFALCSL-HVPLDIEWRDIDESRNFICKLNFNNNPSLVVR--- 1396

Query: 420  DGSGEGHYIYFRGKFGHVVSDHLWLL-----FLPRHGHNWQFESNLIRLSFRSISD-PTW 473
            D     H    R       S+ LWL+      +P   H+ ++ +  +  SF++  D  + 
Sbjct: 1397 DIQSRRHCQXCRDG---DESNQLWLIKIAKSMIPNIYHSNKYRT--LNASFKNDFDTKSV 1451

Query: 474  KVKRCGFHPIYMHE 487
            KV+RCGF  +Y  +
Sbjct: 1452 KVERCGFQLLYAQD 1465



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 137/314 (43%), Gaps = 86/314 (27%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           + E+P     +P LE+L L  C  L  LP  I   K L+TL+   C KL+  P+  G + 
Sbjct: 654 LTEIPD-FSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMR 712

Query: 148 SLEELDVSGTAIRR-PTSSIF-LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
            L ELD+SGTAI   P+SS F  +K L+ L F GC++             N +    C +
Sbjct: 713 KLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSK------------LNKIPTDVCCL 760

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
           +          SL  LDLS C + E  IPSDI  L SL EL L  N+F ++PA+I+ L  
Sbjct: 761 S----------SLEVLDLSYCNIMEGGIPSDICRLSSLXELNLKSNDFRSIPATINRLSR 810

Query: 266 LEELELEDCKRLQSLPQIPPNLQFVRA-NGCSSLVTLFGALKLCRSKYTIINCIDSLKLL 324
           L+ L+L                 FV+  N CS                   NC DS    
Sbjct: 811 LQTLDLHGA--------------FVQDLNQCSQ------------------NCNDS--AY 836

Query: 325 RKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVN 384
             NG+ I +            PGH        S +P+W M +       +  P   +  N
Sbjct: 837 HGNGICIVL------------PGH--------SGVPEWMMXRR-----XIELPQNWHQDN 871

Query: 385 KVVGFAICCVFQVP 398
           + +GFAICCV+ VP
Sbjct: 872 EFLGFAICCVY-VP 884



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 23/210 (10%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +TE+P     +  LE+LTLKGC  L  LP  I   K L+TL    CSKLK+FP+I  +M 
Sbjct: 654 LTEIPD-FSSVPNLEILTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMR 712

Query: 77  DLSKLYLDGTSIAEVPSSIEL--LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            L +L L GT+I E+PSS     L  L++L    C  L ++P+ +  L SL+ L+LS C 
Sbjct: 713 KLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCN 772

Query: 135 KLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--------CNEPPA 185
            +E  +P  + ++ SL EL++     R   ++I  +  L++L   G        C++   
Sbjct: 773 IMEGGIPSDICRLSSLXELNLKSNDFRSIPATINRLSRLQTLDLHGAFVQDLNQCSQNCN 832

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGV 215
            +++H        G   C   ++LP  +GV
Sbjct: 833 DSAYH--------GNGIC---IVLPGHSGV 851



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            + +D++EL + IE    L  L L GCK L+ LP +I   K L+TL   G S+   FPEI 
Sbjct: 1056 EDSDMKELPI-IENPLELDGLCLRGCKYLKSLPSSICEFKSLTTLCCEGCSQLESFPEIL 1114

Query: 726  SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
               + L ++ L G+AI+ +P+SI+ L G    NL  CKNL +LP +I  L SL+ +    
Sbjct: 1115 EDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIKS 1174

Query: 786  CSKLKNVTETLGKVESLEV 804
            C +LK + E LG+++SLE+
Sbjct: 1175 CPELKKLPENLGRLQSLEI 1193



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L L G++I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+TL + 
Sbjct: 1114 LEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESICNLTSLKTLTIK 1173

Query: 61   GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C +LKK P+ +  ++ L  LY+ D  S+     S+  L  L +L L  C  L  +PS I
Sbjct: 1174 SCPELKKLPENLGRLQSLEILYVKDFDSMNCQXPSLSGLCSLRILRLINC-GLREIPSGI 1232

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
              L SL+ L L G  +  ++PD + ++  L  L++S
Sbjct: 1233 CHLTSLQCLVLMG-NQFSSIPDGISQLHKLIVLNLS 1267



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 15/170 (8%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC  LE LPR I   K+L TL+    SK + FPEI  +  +L E+ L GTAI  LP
Sbjct: 669 LTLKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELP 728

Query: 746 ASI---ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +S     L +  ILS  + C  L  +P+ +  L SL ++  S C    N+ E  G + S 
Sbjct: 729 SSSSFGHLKALKILS-FRGCSKLNKIPTDVCCLSSLEVLDLSYC----NIME--GGIPSD 781

Query: 803 EVRLSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVDKC 851
             RLSS     ++ NDF    +S   T+ +L++ + L    ++ +++++C
Sbjct: 782 ICRLSSLXELNLKSNDF----RSIPATINRLSRLQTLDLHGAFVQDLNQC 827



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIEL--LTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +M+ L +L L GT+I E+PSS     L  L++L+ +GC  L+ +P  +  L  L  L+L
Sbjct: 709 GNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSLEVLDL 768

Query: 60  SGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
           S C+ ++   P  +  +  L +L L       +P++I  L  L+ L L+
Sbjct: 769 SYCNIMEGGIPSDICRLSSLXELNLKSNDFRSIPATINRLSRLQTLDLH 817


>gi|224089412|ref|XP_002335049.1| predicted protein [Populus trichocarpa]
 gi|222832778|gb|EEE71255.1| predicted protein [Populus trichocarpa]
          Length = 679

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 228/478 (47%), Gaps = 90/478 (18%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSL-------K 52
           ++  K+L  L L D  S+TEVPSS++ L  LE + L+ C NL S P+  S +       +
Sbjct: 124 LSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNLRSFPMLYSKVLRKLSIYQ 183

Query: 53  C---------------------------------LRTLELSGCSKLKKFPQIVASMEDLS 79
           C                                 L+ L+L GCSK+ KFP++     D+ 
Sbjct: 184 CLDLTTCPTISQNMKSLRLWGTSIKEVPQSITGKLKVLDLWGCSKMTKFPEVSG---DIE 240

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-----------------------VRLP 116
           +L+L  T+I EVPSSI+ L  L  L +N C  L                         LP
Sbjct: 241 ELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITVPMESLEYLGLSETGIKELP 300

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSL 175
           SSI  L  L+ L++SGC KLE++P+    +ESL EL++S T I+  P+ S   M +L+ L
Sbjct: 301 SSIQSLTRLRDLDMSGCSKLESLPEITVPMESLVELNLSKTGIKEIPSISFKHMTSLKIL 360

Query: 176 YFSGC--NEPPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAA 232
              G    E P+S  +   L    L  S C      P +T  + SL +L+LS  G+ E  
Sbjct: 361 KLDGTPLKELPSSIQFLTRL--QSLDMSGCSKLESFPEITVPMESLAELNLSKTGIKE-- 416

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +P  I ++  LK+L L       LP SI  ++ LEEL L     +++LP++PP+L+++R 
Sbjct: 417 LPLSIKDMVCLKKLTLEGTPIKELPLSIKDMVCLEELTLHGTP-IKALPELPPSLRYLRT 475

Query: 293 NGCSSLVTLFGALKLCR--SKYTIINC--IDSLKLLRKNGLAISMLREYLELQAVSDPGH 348
             CSSL T+   + + R   ++   NC  +D   L+    L I    E          G 
Sbjct: 476 RDCSSLETVTSIINIGRLQLRWDFTNCFKVDQKPLIEAMHLKIQSGEEIPR-------GG 528

Query: 349 KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYL 406
            + +V PGS+IP+WF  +  GSS+T+  PS   N +++ G A C VF +P  S   Y 
Sbjct: 529 IIEMVLPGSEIPEWFGDKGVGSSLTIQLPS---NCHQLKGIAFCLVFLLPLPSRDLYF 583



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 130/298 (43%), Gaps = 75/298 (25%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL- 112
           LRT++LS  S L + P +  +   +S    D  S+ EVPSS++ L  LE + L  C NL 
Sbjct: 107 LRTIDLSKSSYLTELPDLSMAKNLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNLR 166

Query: 113 ---------------------------------VRL--------PSSINGLKSLKTLNLS 131
                                            +RL        P SI G   LK L+L 
Sbjct: 167 SFPMLYSKVLRKLSIYQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSITG--KLKVLDLW 224

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE--------P 183
           GC K+   P+  G +   EEL +S TAI+   SSI  +  LR L  +GC++         
Sbjct: 225 GCSKMTKFPEVSGDI---EELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITV 281

Query: 184 PASASWHL--------HLPFNL--------LGKSSCPVALMLPSLT-GVCSLTKLDLSDC 226
           P  +  +L         LP ++        L  S C     LP +T  + SL +L+LS  
Sbjct: 282 PMESLEYLGLSETGIKELPSSIQSLTRLRDLDMSGCSKLESLPEITVPMESLVELNLSKT 341

Query: 227 GLGEAAIPS-DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
           G+ E  IPS    ++ SLK L L+      LP+SI  L  L+ L++  C +L+S P+I
Sbjct: 342 GIKE--IPSISFKHMTSLKILKLDGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPEI 397



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 92/187 (49%), Gaps = 26/187 (13%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR------ 699
            CS++ +  +   DI ++    T I+E+  +I+ L  L +L +NGC  LE LP       
Sbjct: 225 GCSKMTKFPEVSGDIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITVPME 284

Query: 700 -----------------TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                            +I +L  L  L++SG SK    PEIT   + L+E++L  T I+
Sbjct: 285 SLEYLGLSETGIKELPSSIQSLTRLRDLDMSGCSKLESLPEITVPMESLVELNLSKTGIK 344

Query: 743 GLPASIELLSGNILSNLK-DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            +P SI       L  LK D   LK LPS+I  L  L+ +  SGCSKL++  E    +ES
Sbjct: 345 EIP-SISFKHMTSLKILKLDGTPLKELPSSIQFLTRLQSLDMSGCSKLESFPEITVPMES 403

Query: 802 L-EVRLS 807
           L E+ LS
Sbjct: 404 LAELNLS 410



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 38/193 (19%)

Query: 634 QTVRRQSPQEPGNCSRLWEEADEFPDI-------VQVLSDGTDIREL-SLAIELLFGLVQ 685
           Q++ R    +   CS+L    +  P+I       V++    T I+E+ S++ + +  L  
Sbjct: 304 QSLTRLRDLDMSGCSKL----ESLPEITVPMESLVELNLSKTGIKEIPSISFKHMTSLKI 359

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L+G   L+ LP +I  L  L +L++SG SK   FPEIT   + L E++L  T I+ LP
Sbjct: 360 LKLDGTP-LKELPSSIQFLTRLQSLDMSGCSKLESFPEITVPMESLAELNLSKTGIKELP 418

Query: 746 ASIE--------LLSGNILSNL----KDC----------KNLKSLPSTINGLRSLRMMYP 783
            SI+         L G  +  L    KD             +K+LP     LR LR    
Sbjct: 419 LSIKDMVCLKKLTLEGTPIKELPLSIKDMVCLEELTLHGTPIKALPELPPSLRYLRT--- 475

Query: 784 SGCSKLKNVTETL 796
             CS L+ VT  +
Sbjct: 476 RDCSSLETVTSII 488



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 41/173 (23%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T++ +LS+A      LV L L  C +L  +P ++  L  L  +NL      R FP + S 
Sbjct: 119 TELPDLSMAK----NLVSLRLKDCPSLTEVPSSLQYLDKLEYINLRCCYNLRSFPMLYSK 174

Query: 728 RDQLLEIH-------------------LEGTAIRGLPASI------------------EL 750
             + L I+                   L GT+I+ +P SI                    
Sbjct: 175 VLRKLSIYQCLDLTTCPTISQNMKSLRLWGTSIKEVPQSITGKLKVLDLWGCSKMTKFPE 234

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SG+I         ++ +PS+I  L  LR +  +GCSKL+++ E    +ESLE
Sbjct: 235 VSGDIEELWLSETAIQEVPSSIQFLTRLRELEMNGCSKLESLPEITVPMESLE 287


>gi|317415953|emb|CAR94518.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2041

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 139/383 (36%), Positives = 191/383 (49%), Gaps = 52/383 (13%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            LE L LKGC +LS++P  I+ L+ L    LSGCSKLKK P+I   M+ L KL+LDGT+I 
Sbjct: 664  LEQLILKGCTSLSAVPDDIN-LRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIE 722

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSI-NGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            E+P+SI+ L GL LL L +CKNL+ LP  I   L SL+ LN+SGC  L  +P+ LG +E 
Sbjct: 723  ELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC 782

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L+EL  S TAI+   +SI   K+L  L                     LL    C   L 
Sbjct: 783  LQELYASRTAIQELPTSI---KHLTDL--------------------TLLNLRECKNLLT 819

Query: 209  LPSL--TGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            LP +  T + SL  L+LS C  L E  +P ++ +L  LK+LY +R     +P SIS L  
Sbjct: 820  LPDVICTNLTSLQILNLSGCSNLNE--LPENLGSLKCLKDLYASRTAISQVPESISQLSQ 877

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
            LEEL L+ C  LQSLP +P +++ V    C     L GA     +K T+         L 
Sbjct: 878  LEELVLDGCSMLQSLPGLPFSIRVVSVQNCP---LLQGAHS---NKITVWPSAAGFSFLG 931

Query: 326  KNG--------------LAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
            + G              L     + + E       G      +  ++IP W   ++  S+
Sbjct: 932  RQGNNDIGQAFWLPDKHLLWPFYQTFFE--GAIQRGEMFEYGYRSNEIPAWLSRRSTEST 989

Query: 372  ITVTRPSYLYNVNKVVGFAICCV 394
            IT+  P  L   NK +  A+C V
Sbjct: 990  ITIPLPHDLDGKNKWIKLALCFV 1012



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/180 (48%), Positives = 116/180 (64%), Gaps = 2/180 (1%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGC 62
           MK L  L+LDGT+I E+P+SI+ LTGL LL L+ CKNL SLP V  +SL  L+ L +SGC
Sbjct: 708 MKQLRKLHLDGTAIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGC 767

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI-NG 121
           S L + P+ + S+E L +LY   T+I E+P+SI+ L  L LL L ECKNL+ LP  I   
Sbjct: 768 SNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTN 827

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+ LNLSGC  L  +P+ LG ++ L++L  S TAI +   SI  +  L  L   GC+
Sbjct: 828 LTSLQILNLSGCSNLNELPENLGSLKCLKDLYASRTAISQVPESISQLSQLEELVLDGCS 887



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 2/122 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L QL L GC +L  +P  I+ L+ L+   LSG SK ++ PEI     QL ++HL+GTAI 
Sbjct: 664 LEQLILKGCTSLSAVPDDIN-LRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIE 722

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            LP SI+ L+G  L NL+DCKNL SLP  I   L SL+++  SGCS L  + E LG +E 
Sbjct: 723 ELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC 782

Query: 802 LE 803
           L+
Sbjct: 783 LQ 784



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%)

Query: 649 RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYL 707
           +L E  ++   + ++  DGT I EL  +I+ L GL  L L  CKNL  LP  I ++L  L
Sbjct: 700 KLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVICTSLTSL 759

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             LN+SG S   E PE   S + L E++   TAI+ LP SI+ L+   L NL++CKNL +
Sbjct: 760 QILNVSGCSNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLT 819

Query: 768 LPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP  I   L SL+++  SGCS L  + E LG ++ L+
Sbjct: 820 LPDVICTNLTSLQILNLSGCSNLNELPENLGSLKCLK 856



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 6/135 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLEL 59
           + S++ L +LY   T+I E+P+SI+ LT L LL L+ CKNL +LP V  ++L  L+ L L
Sbjct: 777 LGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNL 836

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS L + P+ + S++ L  LY   T+I++VP SI  L  LE L L+ C  L  LP   
Sbjct: 837 SGCSNLNELPENLGSLKCLKDLYASRTAISQVPESISQLSQLEELVLDGCSMLQSLP--- 893

Query: 120 NGLK-SLKTLNLSGC 133
            GL  S++ +++  C
Sbjct: 894 -GLPFSIRVVSVQNC 907



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 103/229 (44%), Gaps = 43/229 (18%)

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA----------IRRPTSSIFL--- 168
           L+ L  LNLS C KL   PD   KV +LE+L + G            +R  T+ I     
Sbjct: 638 LEKLAVLNLSDCQKLIKTPD-FDKVPNLEQLILKGCTSLSAVPDDINLRSLTNFILSGCS 696

Query: 169 -----------MKNLRSLYFSGC--NEPPASASWHLHLP-FNLLGKSSCPVALMLPSL-- 212
                      MK LR L+  G    E P S     HL    LL    C   L LP +  
Sbjct: 697 KLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIK---HLTGLTLLNLRDCKNLLSLPDVIC 753

Query: 213 TGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           T + SL  L++S C  L E  +P ++ +L  L+ELY +R     LP SI  L +L  L L
Sbjct: 754 TSLTSLQILNVSGCSNLNE--LPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNL 811

Query: 272 EDCKRLQSLPQIP----PNLQFVRANGCSSLVTL---FGALKLCRSKYT 313
            +CK L +LP +      +LQ +  +GCS+L  L    G+LK  +  Y 
Sbjct: 812 RECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLKCLKDLYA 860



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 351  SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSY 410
            +  FP S   +WF  Q+ GSSI V  P +LY+    +GFA+C  F + ++ T   L +  
Sbjct: 1667 NFCFPSSITLEWFGDQSSGSSIRVPLPPHLYSATNWIGFALCASFSIMENPTAD-LDNLN 1725

Query: 411  P--AHELECSMD---GSGEGHYIYFRGK-------FGHVVSDHLWLLFLPRHGHNWQF-E 457
            P  +H L C ++   G+ E  + Y           FG  +    W+ ++PR   + Q  E
Sbjct: 1726 PEISHHLICHLESDRGTIEPLHDYCTTNEEFQWLPFGGFI----WVSYIPRVWFSDQLNE 1781

Query: 458  SNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
             +++  SF S  +  + V  CG   +Y H+ EE  +T
Sbjct: 1782 CDILEASFASDHE-AFIVHECGLRLVYQHDEEEIKQT 1817



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 26/163 (15%)

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
            K +  FP ++I +WF +Q+ G S+ +  PS L      +G A+C  F V  HST T L +
Sbjct: 1455 KYNSCFPPNEIVEWFGHQSSGPSVKIPLPSNLCEDTNWIGLALCAYFSVIDHST-TDLDN 1513

Query: 409  SYP--AHELECSMD--------------GSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGH 452
              P  +H L C ++               S E  ++Y  G F       +WL ++PR   
Sbjct: 1514 LNPEISHNLTCLLETDESCLESLHGYCTNSQEFEWLYCMGGF-------IWLSYIPRCWF 1566

Query: 453  NWQF-ESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
            + Q  E   +  S  S    +  V RCG   IY+ + E   ET
Sbjct: 1567 SNQLKERGHLEASIGS-DRGSLGVHRCGLRLIYLEDEEGLKET 1608



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 1/116 (0%)

Query: 662 QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYLSTLNLSGLSKFRE 720
           ++ +  T I+EL  +I+ L  L  L L  CKNL  LP  I + L  L  LNLSG S   E
Sbjct: 785 ELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNE 844

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
            PE   S   L +++   TAI  +P SI  LS      L  C  L+SLP     +R
Sbjct: 845 LPENLGSLKCLKDLYASRTAISQVPESISQLSQLEELVLDGCSMLQSLPGLPFSIR 900



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 22/160 (13%)

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPA- 412
            FP S   +WF  Q+  SS T+  P  L   +  +G A+C  F V +H T        PA 
Sbjct: 1875 FPSSITLEWFGRQSNDSSATILLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAI 1934

Query: 413  -HELECSMDGSGEG------------HYIYFRGKFGHVVSDHLWLLFLPRHGHNWQF-ES 458
             H L C+++   +              +++    FG  V    W+ ++PR   + Q  E 
Sbjct: 1935 SHHLICNLESDRDSLESLHDYCTTNEEFLWLH--FGGFV----WVSYIPRAWFSDQLNEC 1988

Query: 459  NLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQS 498
             ++  S  S  +  + V++CG   +Y H+ EEF +T  +S
Sbjct: 1989 GVLEASIASDHE-AFSVQKCGLRLVYQHDEEEFKQTISRS 2027


>gi|399920187|gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 190/348 (54%), Gaps = 13/348 (3%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           N+  L   I  L  L++++LS    L + P     + +L KL L+G T++ ++  SI LL
Sbjct: 585 NIDHLWNGIKYLDKLKSIDLSYSINLTRTPDFTG-IPNLEKLVLEGCTNLVKIHPSIALL 643

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L++     CK++  LPS +N ++ L+T ++SGC KL+ +P+ +G+ + L +L + GTA
Sbjct: 644 KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLGGTA 702

Query: 159 IRRPTSSI-FLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLG----KSSCPVALMLPS 211
           + +  SSI  L K+L  L  SG    E P S     +L  +  G    KS  P+  +L S
Sbjct: 703 VEKLPSSIEHLSKSLVELDLSGIVIREQPYSLFLKQNLIVSSFGLLPRKSPHPLIPLLAS 762

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L    SLT L L+DC L E  IP+DI +L SL  L L  NNFV+LPASI  L  L  ++L
Sbjct: 763 LKQFSSLTSLKLNDCNLCEGEIPNDIGSLPSLNWLELRGNNFVSLPASIHLLSKLSYIDL 822

Query: 272 EDCKRLQSLPQIPPNLQF-VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA 330
           E+CKRLQ LP++P +    V  + C+SL+       L R   T +NC+ ++     +   
Sbjct: 823 ENCKRLQQLPELPASDYLNVATDDCTSLLVFPDPPDLSRFSLTAVNCLSTVGNQDASYYL 882

Query: 331 ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
            S+++  LE    S   HK   V PGS+IP+WF  Q+ G  +T   PS
Sbjct: 883 YSVIKRLLEETPSSFHFHKF--VIPGSEIPEWFNNQSVGDRVTEKLPS 928



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 62/100 (62%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T++ ++  +I LL  L       CK+++ LP  ++ +++L T ++SG S
Sbjct: 620 PNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCS 678

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE      +L +++L GTA+  LP+SIE LS +++
Sbjct: 679 KLKMIPEFVGQTKRLSKLYLGGTAVEKLPSSIEHLSKSLV 718



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L   I  L  L +++LS        P+ T   + L ++ LEG T +  +  SI LL
Sbjct: 585 NIDHLWNGIKYLDKLKSIDLSYSINLTRTPDFTGIPN-LEKLVLEGCTNLVKIHPSIALL 643

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               + N ++CK++KSLPS +N +  L     SGCSKLK + E +G+ + L
Sbjct: 644 KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRL 693



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 36/173 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIE-----------------------------LLTGLE 31
           +   K LS LYL GT++ ++PSSIE                             +++   
Sbjct: 687 VGQTKRLSKLYLGGTAVEKLPSSIEHLSKSLVELDLSGIVIREQPYSLFLKQNLIVSSFG 746

Query: 32  LLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAE 90
           LL  K    L  L  ++     L +L+L+ C+  + + P  + S+  L+ L L G +   
Sbjct: 747 LLPRKSPHPLIPLLASLKQFSSLTSLKLNDCNLCEGEIPNDIGSLPSLNWLELRGNNFVS 806

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS--GCCKLENVPD 141
           +P+SI LL  L  + L  CK L +LP     L +   LN++   C  L   PD
Sbjct: 807 LPASIHLLSKLSYIDLENCKRLQQLPE----LPASDYLNVATDDCTSLLVFPD 855



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 190/488 (38%), Gaps = 94/488 (19%)

Query: 82   YLDGTSIAEVPSSIEL--------LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            YLD     ++  SI L        +P LE L L  C NLV++  SI  LK LK  N   C
Sbjct: 595  YLDKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNC 654

Query: 134  CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN-EPPASASWHL 191
              ++++P  +  +E LE  DVSG + ++     +   K L  LY  G   E   S+  HL
Sbjct: 655  KSIKSLPSEVN-MEFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLGGTAVEKLPSSIEHL 713

Query: 192  HLPFNLLGKSSC-----PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                  L  S       P +L L           L +S  GL     P      H L   
Sbjct: 714  SKSLVELDLSGIVIREQPYSLFLKQ--------NLIVSSFGLLPRKSP------HPL--- 756

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP------PNLQFVRANGCSSLVT 300
                   + L AS+    +L  L+L DC   +   +IP      P+L ++   G ++ V+
Sbjct: 757  -------IPLLASLKQFSSLTSLKLNDCNLCEG--EIPNDIGSLPSLNWLELRG-NNFVS 806

Query: 301  LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIP 360
            L  ++ L  SK + I+  +  +L +   L  S   +YL +   +D    L +VFP     
Sbjct: 807  LPASIHLL-SKLSYIDLENCKRLQQLPELPAS---DYLNV--ATDDCTSL-LVFPDPPDL 859

Query: 361  KWFMYQNEGSSITVTRPS---YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSY--PAHEL 415
              F         TV       YLY+V K          ++ + +  ++ FH +  P  E+
Sbjct: 860  SRFSLTAVNCLSTVGNQDASYYLYSVIK----------RLLEETPSSFHFHKFVIPGSEI 909

Query: 416  ECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFES------NLIRLSFRSIS 469
                +    G  +    K      +  W+      G  W+  +      N +  SF  I+
Sbjct: 910  PEWFNNQSVGDRV--TEKLPSDACNSKWI------GPYWKRRNCLEDTCNEVTFSFHKIT 961

Query: 470  DPTW-----KVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQ-- 522
                     KVK+CG   +Y H+ +E      QS   +S +L E   +  G+ ++  Q  
Sbjct: 962  RAVGNNRCIKVKKCGGRVLYEHDTDELISKVNQSNS-SSISLYEAVDEQEGAMVKATQEA 1020

Query: 523  -ASGSGSS 529
              SGSG S
Sbjct: 1021 ATSGSGGS 1028


>gi|105922786|gb|ABF81437.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1289

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/289 (41%), Positives = 162/289 (56%), Gaps = 42/289 (14%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  +  L+   L
Sbjct: 768  LTGIPNLESLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MGSLKVCIL 826

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             GCSKL+KFP IV +M+ L  L LDGT I ++ SS+  L GL LL +N CKNL  +PSSI
Sbjct: 827  DGCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSI 886

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSLK L+LSGC +L+ +P+ LG+VESLEE D                 NL+ L   G
Sbjct: 887  GCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFD-----------------NLKVLSLDG 929

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                       +M PSL+G+CSL  L L  C L E A+P DI  
Sbjct: 930  FKR-----------------------IVMPPSLSGLCSLEVLGLCACNLREGALPEDIGC 966

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            L SL+ L L++NNFV+LP SI+ L  LE L LEDC  L+SLP++P  +Q
Sbjct: 967  LSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQ 1015



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 91/178 (51%), Gaps = 30/178 (16%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +MK L  L LDGT IT++ SS+  L GL LL++  CKNL S+P +I  LK L+ L+LS
Sbjct: 839  VGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLS 898

Query: 61   GCSKLKKFPQIVASMEDLSK------LYLDGTSIAEVPSSIELLPGLELLYLNECK---- 110
            GCS+LK  P+ +  +E L +      L LDG     +P S+  L  LE+L L  C     
Sbjct: 899  GCSELKYIPEKLGEVESLEEFDNLKVLSLDGFKRIVMPPSLSGLCSLEVLGLCACNLREG 958

Query: 111  --------------------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
                                N V LP SIN L  L+ L L  C  LE++P    KV++
Sbjct: 959  ALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQT 1016



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  +  L    L G SK  +FP+I  +   L+ + L+GT I 
Sbjct: 798 LQYMNLVNCKSIRILPNNLE-MGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGTGIT 856

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +S+  L G  L ++  CKNL+S+PS+I  L+SL+ +  SGCS+LK + E LG+VESL
Sbjct: 857 KLSSSMHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESL 916

Query: 803 E 803
           E
Sbjct: 917 E 917



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 41/192 (21%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    ++FPDIV  +        DGT I +LS ++  L GL  L++N CKNLE +P 
Sbjct: 829  CSKL----EKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLLSMNSCKNLESIPS 884

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLE------IHLEGTAIRGLPASIE-LLS 752
            +I  LK L  L+LSG S+ +  PE     + L E      + L+G     +P S+  L S
Sbjct: 885  SIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDNLKVLSLDGFKRIVMPPSLSGLCS 944

Query: 753  GNILS----NLKDC-------------------KNLKSLPSTINGLRSLRMMYPSGCSKL 789
              +L     NL++                     N  SLP +IN L  L M+    C+ L
Sbjct: 945  LEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNFVSLPKSINQLFELEMLVLEDCTML 1004

Query: 790  KNVTETLGKVES 801
            +++ +   KV++
Sbjct: 1005 ESLPKVPSKVQT 1016



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 622 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----LDMPGI 669

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +      S +  L  L ++ + +  E PE  S++                    DQL
Sbjct: 670 KESQWNIEAFSKMSRLRLLKINNV-QLSEGPEDLSNKLQFLEWHSYPSKSLPVGLQVDQL 728

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  + +  L    +      + NL +   L   P  + G+ +L  +   GC+ L  
Sbjct: 729 VELHMANSNLEQLWYGCKSAVNLKIINLSNSLYLTKTPD-LTGIPNLESLILEGCTSLSE 787

Query: 792 VTETLGKVESLE 803
           V  +L   + L+
Sbjct: 788 VHPSLAHHKKLQ 799


>gi|296081002|emb|CBI18506.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 176/540 (32%), Positives = 244/540 (45%), Gaps = 93/540 (17%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           +  LE L L+GC +   +  +I  L  L  L L  C KL+ FP+                
Sbjct: 100 MPNLERLVLEGCTSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPR---------------- 143

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           SI E+P SI  L GL LL L  CK L  LPSSI  LKSL+TL LS C KLE+ P+ +  +
Sbjct: 144 SINELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENM 203

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLHLPFNLLGKSSCPV 205
           E L++L + GTA+++   SI  +  L SL    C N      S         L  S C  
Sbjct: 204 EHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSK 263

Query: 206 ALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              LP +L  +  L KL     G      PS I  L +L+ L    NNF +LPA IS L 
Sbjct: 264 LQQLPENLGSLQCLVKLQAD--GTLVRQPPSSIVLLRNLEIL----NNFFSLPAGISKLS 317

Query: 265 NLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK-------YTIINC 317
            L  L L  CK L  +P++P ++  V A  CSSL T+     +C ++       +T+ NC
Sbjct: 318 KLRFLSLNHCKSLLQIPELPSSIIEVNAQYCSSLNTILTPSSVCNNQPVCRWLVFTLPNC 377

Query: 318 IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRP 377
            +   L  +N  +  M      +Q    P    SI  PGS+IP W   QN GS +T+  P
Sbjct: 378 FN---LDAENPCSNDMAIISPRMQINFLPDFGFSIFLPGSEIPDWISNQNLGSEVTIELP 434

Query: 378 SYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHV 437
            + +  N  +GFA+CCVF     +          + +L C +  S E H   FRG  GH+
Sbjct: 435 PHWFESN-FLGFAVCCVFAFEDIAPNGC------SSQLLCQLQ-SDESH---FRG-IGHI 482

Query: 438 V--------------SDHLWLLFLPR------HG---HNWQFESNLIRLSFRSIS-DPTW 473
           +              S H+WL + PR      +G   + W+      + SF  IS  P+ 
Sbjct: 483 LHSIDCEGNSEDRLKSHHMWLAYKPRGRLRISYGDCPNRWRHA----KASFGFISCCPSN 538

Query: 474 KVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVG--SNMEVAQ----ASGSG 527
            V++CG H IY  + EE + T              +HH   G  S+++ A     ASGSG
Sbjct: 539 MVRKCGIHLIYAQDHEERNSTM-------------IHHSSSGNFSDLKSADSSVGASGSG 585



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 113/165 (68%), Gaps = 2/165 (1%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           SI E+P SI  LTGL LL L+ CK L SLP +I  LK L TL LS CSKL+ FP+I+ +M
Sbjct: 144 SINELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENM 203

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E L KL LDGT++ ++  SIE L GL  L L +CKNL  LP SI  LKSL+TL +SGC K
Sbjct: 204 EHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSK 263

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL--YFS 178
           L+ +P+ LG ++ L +L   GT +R+P SSI L++NL  L  +FS
Sbjct: 264 LQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEILNNFFS 308



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 10/193 (5%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           I EL  +I  L GL+ L L  CK L+ LP +I  LK L TL LS  SK   FPEI  + +
Sbjct: 145 INELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENME 204

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L ++ L+GTA++ L  SIE L+G +  NL+DCKNL +LP +I  L+SL  +  SGCSKL
Sbjct: 205 HLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKL 264

Query: 790 KNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVD 849
           + + E LG ++ L          K+Q D   V Q    ++  L   E+L +  S    + 
Sbjct: 265 QQLPENLGSLQCLV---------KLQADGTLVRQPP-SSIVLLRNLEILNNFFSLPAGIS 314

Query: 850 KCMKLSTTATSAC 862
           K  KL   + + C
Sbjct: 315 KLSKLRFLSLNHC 327



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 90/141 (63%), Gaps = 5/141 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M +M+ L  L LDGT++ ++  SIE L GL  L L+ CKNL++LP +I +LK L TL +S
Sbjct: 200 MENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPCSIGNLKSLETLIVS 259

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GCSKL++ P+ + S++ L KL  DGT + + PSSI LL  LE+L      N   LP+ I+
Sbjct: 260 GCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVLLRNLEIL-----NNFFSLPAGIS 314

Query: 121 GLKSLKTLNLSGCCKLENVPD 141
            L  L+ L+L+ C  L  +P+
Sbjct: 315 KLSKLRFLSLNHCKSLLQIPE 335



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 16/155 (10%)

Query: 647 CSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I++       +L DGT +++L  +IE L GLV L L  CKNL  LP 
Sbjct: 190 CSKL----ESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLRDCKNLATLPC 245

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L TL +SG SK ++ PE   S   L+++  +GT +R  P+SI L     L NL
Sbjct: 246 SIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQPPSSIVL-----LRNL 300

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +   N  SLP+ I+ L  LR +  + C  L  + E
Sbjct: 301 EILNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPE 335



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 16/121 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L GC +   +  +I  L  L  LNL    K R FP                 +I 
Sbjct: 103 LERLVLEGCTSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPR----------------SIN 146

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L+G IL +L++CK LKSLPS+I  L+SL  +  S CSKL++  E +  +E L
Sbjct: 147 ELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEIMENMEHL 206

Query: 803 E 803
           +
Sbjct: 207 K 207


>gi|224127917|ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1470

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/466 (31%), Positives = 226/466 (48%), Gaps = 64/466 (13%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLS--------------------SLPVTISSLKCLRT 56
            +  +P ++ LLT L L+ + GC ++S                     LP +I  L+ L  
Sbjct: 753  LVNLPENMYLLTSLLLVDISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRKLIY 812

Query: 57   LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            L LSGCS + +FP++     ++ +LYLDGT+I E+PSSI+ L  L  L+L  CK    LP
Sbjct: 813  LNLSGCSSITEFPKV---SNNIKELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEILP 869

Query: 117  SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
            SSI  L+ L+ LNLSGC +  + P+ L  +  L  L +  T I +  S I  +K L  L 
Sbjct: 870  SSICTLRKLERLNLSGCLQFRDFPEVLEPMVCLRYLYLEETRITKLPSPIGNLKGLACLE 929

Query: 177  FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
               C                 L    C V L L      +  L KL+L  C +  + +P 
Sbjct: 930  VGNC---------------KYLNDIECFVDLQLSERWVDLDYLRKLNLDGCHI--SVVPD 972

Query: 236  DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
             +  L SL+ L L+ NNF T+P SI+ L  L+ L L +CKRL+SLP++PP L  + A+ C
Sbjct: 973  SLGCLSSLEVLDLSGNNFSTIPLSINKLSELQYLGLRNCKRLESLPELPPRLSKLDADNC 1032

Query: 296  SSLVTLFGA----LKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLE-LQAVSDPGH-K 349
             SL  L  +    +K    ++   NC+   ++ +    A+   R Y + L  ++D     
Sbjct: 1033 ESLNYLGSSSSTVVKGNIFEFIFTNCLSLCRINQILPYALKKFRLYTKRLHQLTDVLEGA 1092

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
             S   PG   P+W  +Q+ GS++T    S+  N +K +GF++C V  +  HS G  L   
Sbjct: 1093 CSFFLPGGVSPQWLSHQSWGSTVTCQLSSHWAN-SKFLGFSLCAV--IAFHSFGHSL--- 1146

Query: 410  YPAHELECSMDGS---GEGH--YIYFRGKFG--HVVSDHLWLLFLP 448
                +++C+   S   G+ H  Y Y  G +    + S+H+ + F P
Sbjct: 1147 ----QVKCTYHFSNEHGDSHDLYCYLHGWYDEKRIDSEHILVGFDP 1188



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 134/270 (49%), Gaps = 35/270 (12%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ +VPSSI+ L  L  L L+GC+ L +LP  I+S  CL TL LSGC+ LKK P+   +
Sbjct: 660 TSLVKVPSSIQHLDRLVDLDLRGCERLVNLPSRINS-SCLETLNLSGCANLKKCPE---T 715

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
              L+ L L+ T++ E+P SI  L GL  L L  CK LV LP ++  L SL  +++SGC 
Sbjct: 716 ARKLTYLNLNETAVEELPQSIGELSGLVALNLKNCKLLVNLPENMYLLTSLLLVDISGCS 775

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            +  +PD      ++  L ++GTAI    SSI  ++ L  L  SGC+             
Sbjct: 776 SISRLPDF---SRNIRYLYLNGTAIEELPSSIGDLRKLIYLNLSGCSSITE--------- 823

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNF 253
                          P ++       LD    G     IPS ID L  L EL+L N   F
Sbjct: 824 --------------FPKVSNNIKELYLD----GTAIREIPSSIDCLFELVELHLRNCKQF 865

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQI 283
             LP+SI  L  LE L L  C + +  P++
Sbjct: 866 EILPSSICTLRKLERLNLSGCLQFRDFPEV 895



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 100/183 (54%), Gaps = 9/183 (4%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            ++ +LYLDGT+I E+PSSI+ L  L  L L+ CK    LP +I +L+ L  L LSGC + 
Sbjct: 830  NIKELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEILPSSICTLRKLERLNLSGCLQF 889

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL--------VRLPS 117
            + FP+++  M  L  LYL+ T I ++PS I  L GL  L +  CK L        ++L  
Sbjct: 890  RDFPEVLEPMVCLRYLYLEETRITKLPSPIGNLKGLACLEVGNCKYLNDIECFVDLQLSE 949

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
                L  L+ LNL G C +  VPD+LG + SLE LD+SG        SI  +  L+ L  
Sbjct: 950  RWVDLDYLRKLNLDG-CHISVVPDSLGCLSSLEVLDLSGNNFSTIPLSINKLSELQYLGL 1008

Query: 178  SGC 180
              C
Sbjct: 1009 RNC 1011



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 13/161 (8%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP    +I ++  DGT IRE+  +I+ LF LV+L L  CK  E LP +I  L+ L  LN
Sbjct: 823 EFPKVSNNIKELYLDGTAIREIPSSIDCLFELVELHLRNCKQFEILPSSICTLRKLERLN 882

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           LSG  +FR+FPE+      L  ++LE T I  LP+ I  L G     + +CK L  +   
Sbjct: 883 LSGCLQFRDFPEVLEPMVCLRYLYLEETRITKLPSPIGNLKGLACLEVGNCKYLNDIECF 942

Query: 772 IN--------GLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           ++         L  LR +   GC  +  V ++LG + SLEV
Sbjct: 943 VDLQLSERWVDLDYLRKLNLDGC-HISVVPDSLGCLSSLEV 982



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 70/111 (63%), Gaps = 4/111 (3%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L LNG   +E LP +I  L+ L  LNLSG S   EFP+++++   + E++L+GTAIR +P
Sbjct: 790 LYLNGTA-IEELPSSIGDLRKLIYLNLSGCSSITEFPKVSNN---IKELYLDGTAIREIP 845

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           +SI+ L   +  +L++CK  + LPS+I  LR L  +  SGC + ++  E L
Sbjct: 846 SSIDCLFELVELHLRNCKQFEILPSSICTLRKLERLNLSGCLQFRDFPEVL 896



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + ++  +I+ L  LV L L GC+ L  LP  I++   L TLNLSG +  ++ PE    
Sbjct: 660 TSLVKVPSSIQHLDRLVDLDLRGCERLVNLPSRINS-SCLETLNLSGCANLKKCPETAR- 717

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             +L  ++L  TA+  LP SI  LSG +  NLK+CK L +LP  +  L SL ++  SGCS
Sbjct: 718 --KLTYLNLNETAVEELPQSIGELSGLVALNLKNCKLLVNLPENMYLLTSLLLVDISGCS 775

Query: 788 KLKNVTE 794
            +  + +
Sbjct: 776 SISRLPD 782



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 46/297 (15%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  L+ DG  +T +PS+      +E+     C  ++ L     +L  L+ + LS C  
Sbjct: 581 EELRYLHWDGYPLTSLPSNFRPQNLVEINL--SCSKVNRLWRGDQNLVNLKDVNLSNCEH 638

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +   P       DLSK                    LE L L  C +LV++PSSI  L  
Sbjct: 639 ITFLP-------DLSKA-----------------RNLERLNLQFCTSLVKVPSSIQHLDR 674

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE-- 182
           L  L+L GC +L N+P  +     LE L++SG A  +        +  R L +   NE  
Sbjct: 675 LVDLDLRGCERLVNLPSRINS-SCLETLNLSGCANLKKCP-----ETARKLTYLNLNETA 728

Query: 183 ----PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDI 237
               P +       +  NL    +C + + LP ++  + SL  +D+S C    ++I    
Sbjct: 729 VEELPQSIGELSGLVALNL---KNCKLLVNLPENMYLLTSLLLVDISGC----SSISRLP 781

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
           D   +++ LYLN      LP+SI  L  L  L L  C  +   P++  N++ +  +G
Sbjct: 782 DFSRNIRYLYLNGTAIEELPSSIGDLRKLIYLNLSGCSSITEFPKVSNNIKELYLDG 838


>gi|147834354|emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/296 (39%), Positives = 165/296 (55%), Gaps = 34/296 (11%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M  M+ L +L L  T I E+P SI  L  L  L L+ C+NL SLP +I  LK L  L+L 
Sbjct: 854  MEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPSSICRLKSLEELDLY 913

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             CS L+ FP+I+ +ME L KL L GT I E+PSSIE L  L  + L E KNL  LPSSI 
Sbjct: 914  YCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVEXKNLRSLPSSIC 973

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             LK L+ LNL GC  LE  P+ +  +E L++LD+SGT+I++  SSI  + +L S   S C
Sbjct: 974  RLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYC 1033

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                +  S                      S+ G+ SLTKL LS         P+ +   
Sbjct: 1034 TNLRSLPS----------------------SIGGLKSLTKLSLS-------GRPNRVT-- 1062

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
               ++L+L++NN   +P+ IS L NLE L++  CK L+ +P +P +L+ + A+GC+
Sbjct: 1063 ---EQLFLSKNNIHHIPSVISQLCNLECLDISHCKMLEEIPDLPSSLREIDAHGCT 1115



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 161/301 (53%), Gaps = 32/301 (10%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  LYL   +I E+PSSI  LT L+ L+++GC+NL SLP +I  LK L  L+L GCS L 
Sbjct: 718 LKRLYLHSIAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLX 777

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            FP+I+ +ME L++L L GT +  +PSSIE L  L  L L  CKNL  LPSSI  LKSL+
Sbjct: 778 TFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLE 837

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
            L+L GC  LE  P+ +  +E L EL++S T I+                     E P S
Sbjct: 838 ELDLFGCSNLETFPEIMEDMECLMELNLSRTCIK---------------------ELPPS 876

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVC---SLTKLDLSDCGLGEAAIPSDIDNLHSL 243
             +  HL F  LG   C     LPS   +C   SL +LDL  C   E   P  ++N+  L
Sbjct: 877 IGYLNHLTF--LGLQCCQNLRSLPS--SICRLKSLEELDLYYCSNLE-IFPEIMENMECL 931

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVT 300
            +L L+  +   LP+SI  L +L  + L + K L+SLP     L+F+      GCS L T
Sbjct: 932 IKLDLSGTHIKELPSSIEYLNHLTSMRLVEXKNLRSLPSSICRLKFLEKLNLYGCSHLET 991

Query: 301 L 301
            
Sbjct: 992 F 992



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 1/139 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           I EL  +I  L  L  L++ GC+NL  LP +I  LK L  L+L G S    FPEI  + +
Sbjct: 728 IDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLXTFPEIMENME 787

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L E++L GT ++GLP+SIE L+      L+ CKNL+SLPS+I  L+SL  +   GCS L
Sbjct: 788 WLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNL 847

Query: 790 KNVTETLGKVESL-EVRLS 807
           +   E +  +E L E+ LS
Sbjct: 848 ETFPEIMEDMECLMELNLS 866



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 9/147 (6%)

Query: 657  FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            FP+I++ +         GT I+EL  +IE L  L  + L   KNL  LP +I  LK+L  
Sbjct: 921  FPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRLVEXKNLRSLPSSICRLKFLEK 980

Query: 710  LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            LNL G S    FPEI    + L ++ L GT+I+ LP+SI  L+      L  C NL+SLP
Sbjct: 981  LNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLTSFRLSYCTNLRSLP 1040

Query: 770  STINGLRSLRMMYPSGCSKLKNVTETL 796
            S+I GL+SL  +  SG  +   VTE L
Sbjct: 1041 SSIGGLKSLTKLSLSG--RPNRVTEQL 1065



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 7/153 (4%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +         GT ++ L  +IE L  L +L L  CKNL  LP +I  LK L  
Sbjct: 779 FPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLTRLELRCCKNLRSLPSSIWRLKSLEE 838

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           L+L G S    FPEI    + L+E++L  T I+ LP SI  L+      L+ C+NL+SLP
Sbjct: 839 LDLFGCSNLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLP 898

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           S+I  L+SL  +    CS L+   E +  +E L
Sbjct: 899 SSICRLKSLEELDLYYCSNLEIFPEIMENMECL 931



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 87/164 (53%), Gaps = 11/164 (6%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS L    + FP+I++ +          T I+EL  +I  L  L  L L  C+NL  LP 
Sbjct: 844  CSNL----ETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLTFLGLQCCQNLRSLPS 899

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  LK L  L+L   S    FPEI  + + L+++ L GT I+ LP+SIE L+      L
Sbjct: 900  SICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLTSMRL 959

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             + KNL+SLPS+I  L+ L  +   GCS L+   E +  +E L+
Sbjct: 960  VEXKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLK 1003



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
            L QL +  C+ L+++  +I  LK L+ LNL G  K    P        L  ++L   AI
Sbjct: 669 NLEQLNIELCEKLDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAI 728

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP+SI  L+     +++ C+NL+SLPS+I  L+SL  +   GCS L    E +  +E 
Sbjct: 729 DELPSSIHHLTQLQTLSIRGCENLRSLPSSICRLKSLEELDLYGCSNLXTFPEIMENMEW 788

Query: 802 L-EVRLS 807
           L E+ LS
Sbjct: 789 LTELNLS 795


>gi|356553715|ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1127

 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 150/433 (34%), Positives = 217/433 (50%), Gaps = 64/433 (14%)

Query: 7    LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            L  L L+G  ++ EV  S+     L LL LKGC NL +LP T   +  L  L LSGCSK+
Sbjct: 655  LEILLLEGCINLVEVHQSVGQHKKLVLLNLKGCINLQTLP-TKFEMDSLEELILSGCSKV 713

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            KK P    +M+ LS                       L+ L +CKNL+ LP SI  LKSL
Sbjct: 714  KKLPNFGKNMQHLS-----------------------LVNLEKCKNLLWLPKSIWNLKSL 750

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
            + L++ GC K   +P+++ +  SLEELDVSGT IR  TSS   ++NL+ L F G NE  +
Sbjct: 751  RKLSICGCSKFSTLPNSMNENGSLEELDVSGTPIREITSSKVCLENLKELSFGGRNELAS 810

Query: 186  SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
            ++ W+LH   ++  +   P  L+LP+L+ + SL  L+LS C L + +IP  + +L SL  
Sbjct: 811  NSLWNLHQRISMHRRQQVPKELILPTLSRLTSLKFLNLSYCDLNDESIPDSLGSLLSLLG 870

Query: 246  LYLNRNNFVTLPAS-ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL--- 301
            L L+ NNFV+ P   IS L  L+ L L DC RL+SLP +PP+ Q +     + +  L   
Sbjct: 871  LNLSGNNFVSPPTRCISNLHTLQSLTLIDCPRLESLPMLPPSAQCLGTTNSTQMKPLNSD 930

Query: 302  ------FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP 355
                     L + ++ +   + + +L L   N        +      + D  H L I+ P
Sbjct: 931  AYMLWKIYELHMNQTYFLYTHSLPTLPLTHPNYFHKVCAYQ------MEDRPHFLFII-P 983

Query: 356  GSQIPKW----FM-------YQNEGS----SITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
            G +I KW    F+       Y   GS    SI V  P+YL + +  +G AIC   + P  
Sbjct: 984  GREIQKWNEVFFLIDPSHHPYNRLGSDSVASIIVDVPNYLVS-SGWLGIAICLALEPPN- 1041

Query: 401  STGTYLFHSYPAH 413
                 + HS P+H
Sbjct: 1042 -----MQHSSPSH 1049



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 24/162 (14%)

Query: 4   MKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           M  L +L L G S + ++P+  + +  L L+ L+ CKNL  LP +I +LK LR L + GC
Sbjct: 699 MDSLEELILSGCSKVKKLPNFGKNMQHLSLVNLEKCKNLLWLPKSIWNLKSLRKLSICGC 758

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--------NECKNLVR 114
           SK    P  +     L +L + GT I E+ SS   L  L+ L          N   NL +
Sbjct: 759 SKFSTLPNSMNENGSLEELDVSGTPIREITSSKVCLENLKELSFGGRNELASNSLWNLHQ 818

Query: 115 LPS--------------SINGLKSLKTLNLSGC-CKLENVPD 141
             S              +++ L SLK LNLS C    E++PD
Sbjct: 819 RISMHRRQQVPKELILPTLSRLTSLKFLNLSYCDLNDESIPD 860



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 4/157 (2%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           ++W  +  F  +  + LS   D+ E S  +  +  L  L L GC NL  + +++   K L
Sbjct: 621 KIWSGSQHFAKLKFIDLSHSEDLIE-SPIVSGVPCLEILLLEGCINLVEVHQSVGQHKKL 679

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLK 766
             LNL G    +  P      D L E+ L G + ++ LP   + +    L NL+ CKNL 
Sbjct: 680 VLLNLKGCINLQTLP-TKFEMDSLEELILSGCSKVKKLPNFGKNMQHLSLVNLEKCKNLL 738

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            LP +I  L+SLR +   GCSK   +  ++ +  SLE
Sbjct: 739 WLPKSIWNLKSLRKLSICGCSKFSTLPNSMNENGSLE 775



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LS  + +++L    + +  L  + L  CKNL  LP++I  LK L  L++ G SKF   P
Sbjct: 706 ILSGCSKVKKLPNFGKNMQHLSLVNLEKCKNLLWLPKSIWNLKSLRKLSICGCSKFSTLP 765

Query: 723 EITSSRDQLLEIHLEGTAIRGLPAS 747
              +    L E+ + GT IR + +S
Sbjct: 766 NSMNENGSLEELDVSGTPIREITSS 790


>gi|359489072|ref|XP_002262840.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 671

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 194/374 (51%), Gaps = 34/374 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +MK L +LYL+ T+I E+P+SI  L  L+ L+L+   ++  LP +I SLK L  L + 
Sbjct: 92  LGNMKCLKELYLENTAIKELPNSIGCLEALQNLSLQN-TSIKELPNSIGSLKALEVLFVD 150

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            CS L+KFP+I  +ME L  L   GT+I E+P SI  L GL  L L  CKNL  LPSSI+
Sbjct: 151 DCSNLEKFPEIQRNMESLKNLSASGTAIKELPYSIRHLIGLSRLNLENCKNLRSLPSSIH 210

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           GLK L+ L L+GC  LE   +    VE    L + G  I    SSI  +K L+SL    C
Sbjct: 211 GLKYLENLALNGCSNLEAFSEIEVDVEHSRHLHLRGMGITELPSSIERLKGLKSLELINC 270

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV-----------CSLTKLDLSDCGLG 229
                       LP N +G  +C   L + + + +           C LT+LDL+ C L 
Sbjct: 271 ENLET-------LP-NSIGNLTCLSRLFVRNCSKLHKLPDNLRSLQCCLTELDLAGCNLM 322

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
           E AIPSD+  L SL+ L ++ N+   +P  I  L  L  L +  C +L+ + ++P +L+ 
Sbjct: 323 EGAIPSDLWCLSSLESLDVSENHIRCIPVGIIQLSKLIFLGMNHCPKLEEISELPSSLRM 382

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK 349
           ++A+GC  L     AL    +     + ++  KL  +N   +   R++ +          
Sbjct: 383 IQAHGCPCL----KALSCDPTDVLWFSLLNYFKLDTEN---LKCERDFYKTHC------N 429

Query: 350 LSIVFPGSQ-IPKW 362
           +S+V PGS  IP+W
Sbjct: 430 ISVVIPGSNGIPEW 443



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 11/158 (6%)

Query: 646 NCSRLWEEADEFPDIVQVL-------SDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           +CS L    ++FP+I + +       + GT I+EL  +I  L GL +L L  CKNL  LP
Sbjct: 151 DCSNL----EKFPEIQRNMESLKNLSASGTAIKELPYSIRHLIGLSRLNLENCKNLRSLP 206

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
            +I  LKYL  L L+G S    F EI    +    +HL G  I  LP+SIE L G     
Sbjct: 207 SSIHGLKYLENLALNGCSNLEAFSEIEVDVEHSRHLHLRGMGITELPSSIERLKGLKSLE 266

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           L +C+NL++LP++I  L  L  ++   CSKL  + + L
Sbjct: 267 LINCENLETLPNSIGNLTCLSRLFVRNCSKLHKLPDNL 304



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 8/153 (5%)

Query: 655 DEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           ++FP+I+       ++  + T I+EL  +I  L  L  L+L    +++ LP +I +LK L
Sbjct: 86  EKFPEILGNMKCLKELYLENTAIKELPNSIGCLEALQNLSLQN-TSIKELPNSIGSLKAL 144

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             L +   S   +FPEI  + + L  +   GTAI+ LP SI  L G    NL++CKNL+S
Sbjct: 145 EVLFVDDCSNLEKFPEIQRNMESLKNLSASGTAIKELPYSIRHLIGLSRLNLENCKNLRS 204

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           LPS+I+GL+ L  +  +GCS L+  +E    VE
Sbjct: 205 LPSSIHGLKYLENLALNGCSNLEAFSEIEVDVE 237



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 26/160 (16%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLER-----------------------LPRTISAL 704
           T I+EL  +I  L  L  L L+GC + E+                       LP  I  L
Sbjct: 12  TGIKELPGSIGYLESLESLNLSGCSDFEKFPTIQGTMKCLKNLILEGTAIKELPNNIGYL 71

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK-DCK 763
           K L T+ L+  SKF +FPEI  +   L E++LE TAI+ LP SI  L    L NL     
Sbjct: 72  KSLETIYLTNSSKFEKFPEILGNMKCLKELYLENTAIKELPNSIGCLEA--LQNLSLQNT 129

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           ++K LP++I  L++L +++   CS L+   E    +ESL+
Sbjct: 130 SIKELPNSIGSLKALEVLFVDDCSNLEKFPEIQRNMESLK 169


>gi|224126739|ref|XP_002329461.1| predicted protein [Populus trichocarpa]
 gi|222870141|gb|EEF07272.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 151/455 (33%), Positives = 219/455 (48%), Gaps = 44/455 (9%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ L LS    L + P   + +  L KL L D  S+ EV  SI  L  L L+ L +CK L
Sbjct: 61  LKFLNLSHSHYLSRTPDF-SRLPHLEKLKLKDCRSLVEVHHSIGYLDRLVLVNLKDCKQL 119

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
           +RLPSS   LKS++ L LSGC K + +P+ LG +ESL  L    TAIR+  S+I  +KNL
Sbjct: 120 MRLPSSFWKLKSIEILYLSGCSKFDELPEDLGDLESLTVLHADDTAIRQVPSTIVRLKNL 179

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           + L   GC    ++      + + L  K   P  L+ PS  G+  LT L LSDC L + A
Sbjct: 180 QDLSLCGCKGSTSATFPSRLMSWFLPRKIPNPTNLLPPSFHGLNRLTSLLLSDCNLSDDA 239

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +P D+ +L SL +L L+RN+F +LPA +S LL L+ L L+D  RLQ++P +P NL  + A
Sbjct: 240 LPRDLGSLPSLTKLELDRNSFQSLPAGLSSLLRLKSLRLDDNTRLQTIPALPRNLDVLHA 299

Query: 293 NGCSSLVTLFGALKLCRSKYTII-NCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL- 350
             C+SL  L       R +   I NC    KL+   GL  S    +++++   D  + L 
Sbjct: 300 LNCTSLERLSDISVASRMRLLYIANCP---KLIEAPGLDKSRSISHIDMEGCYDISNTLK 356

Query: 351 ---------SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS 401
                     +V PG++IP  F Y+NEG+SI    P +       +   I C   + K  
Sbjct: 357 NSMHKGCISGLVLPGNEIPALFNYKNEGASILFKLPEFDGRNLNGMNVCIVCSSHLEKEE 416

Query: 402 TGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVS---DHLWLLFLPRHGHNWQFES 458
           T           ++   +    +G    FR    ++V    DHLW       GH     +
Sbjct: 417 T----------KQIRIKLTNYTKGFTKKFRAVAVNLVKSCEDHLW------QGH---ISN 457

Query: 459 NLIRLSFRS----ISD--PTWKVKRCGFHPIYMHE 487
           N  +L        I D   T  VK+ G + +Y  +
Sbjct: 458 NFFKLGSEDEVELIVDCMNTMTVKKTGVYLVYEQD 492



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 112/258 (43%), Gaps = 44/258 (17%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+ EV  SI  L  L L+ LK CK L  LP +   LK +  L LSGCSK  + P+ +
Sbjct: 91  DCRSLVEVHHSIGYLDRLVLVNLKDCKQLMRLPSSFWKLKSIEILYLSGCSKFDELPEDL 150

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN--------------LVR---- 114
             +E L+ L+ D T+I +VPS+I  L  L+ L L  CK               L R    
Sbjct: 151 GDLESLTVLHADDTAIRQVPSTIVRLKNLQDLSLCGCKGSTSATFPSRLMSWFLPRKIPN 210

Query: 115 ----LPSSINGLKSLKTLNLSGCCKLEN-VPDTLGKVESLEELDVSGTAIR--------- 160
               LP S +GL  L +L LS C   ++ +P  LG + SL +L++   + +         
Sbjct: 211 PTNLLPPSFHGLNRLTSLLLSDCNLSDDALPRDLGSLPSLTKLELDRNSFQSLPAGLSSL 270

Query: 161 ------------RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
                       R  +   L +NL  L+   C      +   +     LL  ++CP  + 
Sbjct: 271 LRLKSLRLDDNTRLQTIPALPRNLDVLHALNCTSLERLSDISVASRMRLLYIANCPKLIE 330

Query: 209 LPSLTGVCSLTKLDLSDC 226
            P L    S++ +D+  C
Sbjct: 331 APGLDKSRSISHIDMEGC 348



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 46/85 (54%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D   + E+  +I  L  LV + L  CK L RLP +   LK +  L LSG SKF E PE
Sbjct: 89  LKDCRSLVEVHHSIGYLDRLVLVNLKDCKQLMRLPSSFWKLKSIEILYLSGCSKFDELPE 148

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASI 748
                + L  +H + TAIR +P++I
Sbjct: 149 DLGDLESLTVLHADDTAIRQVPSTI 173



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 37/58 (63%)

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           SI  L   +L NLKDCK L  LPS+   L+S+ ++Y SGCSK   + E LG +ESL V
Sbjct: 101 SIGYLDRLVLVNLKDCKQLMRLPSSFWKLKSIEILYLSGCSKFDELPEDLGDLESLTV 158



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 46/200 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L+ L+ D T+I +VPS+I  L  L+ L+L GCK  +S                 
Sbjct: 150 LGDLESLTVLHADDTAIRQVPSTIVRLKNLQDLSLCGCKGSTSATFPSRLMSWFLPRKIP 209

Query: 44  -----LPVTISSLKCLRTLELSGCS-KLKKFPQIVASMEDLSKLYLDGTSIAEVPS---- 93
                LP +   L  L +L LS C+      P+ + S+  L+KL LD  S   +P+    
Sbjct: 210 NPTNLLPPSFHGLNRLTSLLLSDCNLSDDALPRDLGSLPSLTKLELDRNSFQSLPAGLSS 269

Query: 94  ----------------SIELLP-GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
                           +I  LP  L++L+   C +L RL S I+    ++ L ++ C KL
Sbjct: 270 LLRLKSLRLDDNTRLQTIPALPRNLDVLHALNCTSLERL-SDISVASRMRLLYIANCPKL 328

Query: 137 ENVPDTLGKVESLEELDVSG 156
              P  L K  S+  +D+ G
Sbjct: 329 IEAP-GLDKSRSISHIDMEG 347


>gi|147821370|emb|CAN67940.1| hypothetical protein VITISV_013693 [Vitis vinifera]
          Length = 1386

 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 164/568 (28%), Positives = 243/568 (42%), Gaps = 111/568 (19%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR----- 55
              +M  L +L L  + I E+P SI  L  LE L L  C N    P    ++KCL+     
Sbjct: 844  FTNMGRLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLE 903

Query: 56   ------------------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                              +L LSGCS L++FP+I  +M +L  L+LD T+I  +P S+  
Sbjct: 904  NTAIKELPNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGH 963

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            L  L+ L L+ CKNL  LP+SI  LKSL+ L+L+GC  LE   +    +E LE L +  T
Sbjct: 964  LTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRET 1023

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML---PSLTG 214
             I    SSI  ++ L+SL    C    A       LP N +G  +C  +L +   P L  
Sbjct: 1024 GISELPSSIEHLRGLKSLELINCENLVA-------LP-NSIGNLTCLTSLHVRNCPKLHN 1075

Query: 215  V--------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            +        C LT LDL  C L E  IPSD+  L  L  L ++ N    +PA I+ L  L
Sbjct: 1076 LPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKL 1135

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
              L +  C  L+ + ++P +L ++ A+GC SL T                          
Sbjct: 1136 RTLLINHCPMLEVIGELPSSLGWIEAHGCPSLET-------------------------- 1169

Query: 327  NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
               + S+L   L     S    K +I+ PGS  IP+W  +Q  G  ++V  P   Y  N 
Sbjct: 1170 -ETSSSLLWSSLLKHLKSPIQQKFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNN 1228

Query: 386  VVGFAICCVFQVPKHS------TGTYLFH-----------------SYPAHELECSMDGS 422
            ++GF +     VP         T  ++ H                  +  H    S+ G 
Sbjct: 1229 LLGFVL-FFHHVPLDDDDECVRTSGFIPHCKLAISHGDQSKRLDDIGFHPHCKTYSISGL 1287

Query: 423  GEGHYIYFRGKFGHVVSD-HLWLLFLPRHG-------HNW-----QFESNLIRLSFRSIS 469
              G   Y  G      SD  LW+ + P+ G         W      F++ +   SF    
Sbjct: 1288 SYGSTRYDSGS----TSDPALWVTYFPQIGIPSKYRSRKWNNFKAHFDNPVGNASFTCGE 1343

Query: 470  DPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
            + ++KVK CG H IY  + + + + +++
Sbjct: 1344 NASFKVKSCGIHLIYAQDQKHWPQPSRK 1371



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 6/294 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G TS+ E+ SSI  L  L  L L GC+ L S P ++   + L  L L
Sbjct: 608 FSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMK-FESLEVLYL 666

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C  LKKFP+I  +ME L +LYL+ + I E+PSSI  L  LE+L L+ C N  + P   
Sbjct: 667 NCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIH 726

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             +K L+ L L GC K EN PDT   +  L  L +  + I+   SSI  +++L  L  S 
Sbjct: 727 GNMKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISC 786

Query: 180 CN--EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           C+  E       ++    NL  + +  +  +  S+  + SL  L L  C L         
Sbjct: 787 CSKFEKFPEIQGNMKCLKNLYLRXTA-IQELPNSIGSLTSLEILSLEKC-LKFEKFSDVF 844

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            N+  L+EL L+R+    LP SI  L +LE L L  C   +  P+I  N++ ++
Sbjct: 845 TNMGRLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLK 898



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 77/151 (50%)

Query: 646  NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
            N  R  E      ++  +  D T I  L  ++  L  L  L L+ CKNL+ LP +I  LK
Sbjct: 930  NLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPNSICELK 989

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             L  L+L+G S    F EIT   +QL  + L  T I  LP+SIE L G     L +C+NL
Sbjct: 990  SLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLKSLELINCENL 1049

Query: 766  KSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             +LP++I  L  L  ++   C KL N+ + L
Sbjct: 1050 VALPNSIGNLTCLTSLHVRNCPKLHNLPDNL 1080



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 38/219 (17%)

Query: 623  GCMSCYKK-WGRQTVRRQSPQEPGNCSRL----WEEADEFPDIVQVLSDGTDIRELSL-- 675
            G M C K  + R T  ++ P   G+ + L     E+  +F     V ++   +REL L  
Sbjct: 798  GNMKCLKNLYLRXTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHR 857

Query: 676  --------AIELLFGLVQLTLNGCKNLER-----------------------LPRTISAL 704
                    +I  L  L  L L+ C N E+                       LP +I  L
Sbjct: 858  SGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRL 917

Query: 705  KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
            + L +L LSG S    FPEI  +   L  + L+ TAI GLP S+  L+     NL +CKN
Sbjct: 918  QALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKN 977

Query: 765  LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            LKSLP++I  L+SL  +  +GCS L+  +E    +E LE
Sbjct: 978  LKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLE 1016



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 133/295 (45%), Gaps = 16/295 (5%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P   +    L  L  + C  L+SLP      K L  + L   S +K+  +    +E+L 
Sbjct: 536 LPKDFQFPHDLRYLHWQRC-TLTSLPWNFYG-KHLIEINLKS-SNIKQLWKGNKCLEELK 592

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            + L  +           +P LE L L  C +L  L SSI  LKSL  LNL+GC +L + 
Sbjct: 593 GIDLSNSKQLVKMPKFSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSF 652

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYF--SGCNEPPASASWHLHLPFN 196
           P ++ K ESLE L ++     +    I   M+ L+ LY   SG  E P+S  +   L   
Sbjct: 653 PSSM-KFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASL--E 709

Query: 197 LLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
           +L  S+C      P + G +  L +L L  C   E   P     +  L+ L+L ++    
Sbjct: 710 VLNLSNCSNFEKFPXIHGNMKFLRELYLEGCPKFE-NFPDTFTYMGHLRRLHLRKSGIKE 768

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGAL 305
           LP+SI  L +LE L++  C + +  P+I  N++     ++R      L    G+L
Sbjct: 769 LPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRXTAIQELPNSIGSL 823



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 4/143 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL  +I  L  L  L L GC+ L   P ++   + L  L L+     ++FPEI  +
Sbjct: 623 TSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMK-FESLEVLYLNCCPNLKKFPEIHGN 681

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L E++L  + I+ LP+SI  L+   + NL +C N +  P     ++ LR +Y  GC 
Sbjct: 682 MECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEGCP 741

Query: 788 KLKNVTET---LGKVESLEVRLS 807
           K +N  +T   +G +  L +R S
Sbjct: 742 KFENFPDTFTYMGHLRRLHLRKS 764



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + I+EL  +I  L  L  L L+ C N E+ P     +K+L  L L G  KF  FP+  + 
Sbjct: 693 SGIQELPSSIVYLASLEVLNLSNCSNFEKFPXIHGNMKFLRELYLEGCPKFENFPDTFTY 752

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L  +HL  + I+ LP+SI  L    + ++  C   +  P     ++ L+ +Y    +
Sbjct: 753 MGHLRRLHLRKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRX-T 811

Query: 788 KLKNVTETLGKVESLEV 804
            ++ +  ++G + SLE+
Sbjct: 812 AIQELPNSIGSLTSLEI 828



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 10/144 (6%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L++S  SKF +FPEI  +   L  ++L  TAI+ LP SI  L+ 
Sbjct: 766 IKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRXTAIQELPNSIGSLTS 825

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLR--MMYPSGCSKLKNVTETLGKVESLE-VRLSSWN 810
             + +L+ C   +        +  LR   ++ SG   +K +  ++G +ESLE + LS  +
Sbjct: 826 LEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSG---IKELPGSIGYLESLENLNLSYCS 882

Query: 811 R----PKMQNDFDCVEQSAVETVT 830
                P++Q +  C+++ ++E   
Sbjct: 883 NFEKFPEIQGNMKCLKELSLENTA 906


>gi|359493398|ref|XP_003634586.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 164/568 (28%), Positives = 243/568 (42%), Gaps = 111/568 (19%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR----- 55
              +M  L +L L  + I E+P SI  L  LE L L  C N    P    ++KCL+     
Sbjct: 785  FTNMGRLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLE 844

Query: 56   ------------------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                              +L LSGCS L++FP+I  +M +L  L+LD T+I  +P S+  
Sbjct: 845  NTAIKELPNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGH 904

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            L  L+ L L+ CKNL  LP+SI  LKSL+ L+L+GC  LE   +    +E LE L +  T
Sbjct: 905  LTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRET 964

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML---PSLTG 214
             I    SSI  ++ L+SL    C    A       LP N +G  +C  +L +   P L  
Sbjct: 965  GISELPSSIEHLRGLKSLELINCENLVA-------LP-NSIGNLTCLTSLHVRNCPKLHN 1016

Query: 215  V--------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            +        C LT LDL  C L E  IPSD+  L  L  L ++ N    +PA I+ L  L
Sbjct: 1017 LPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKL 1076

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
              L +  C  L+ + ++P +L ++ A+GC SL T                          
Sbjct: 1077 RTLLINHCPMLEVIGELPSSLGWIEAHGCPSLET-------------------------- 1110

Query: 327  NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
               + S+L   L     S    K +I+ PGS  IP+W  +Q  G  ++V  P   Y  N 
Sbjct: 1111 -ETSSSLLWSSLLKHLKSPIQQKFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNN 1169

Query: 386  VVGFAICCVFQVPKHS------TGTYLFH-----------------SYPAHELECSMDGS 422
            ++GF +     VP         T  ++ H                  +  H    S+ G 
Sbjct: 1170 LLGFVL-FFHHVPLDDDDECVRTSGFIPHCKLAISHGDQSKRLDDIGFHPHCKTYSISGL 1228

Query: 423  GEGHYIYFRGKFGHVVSD-HLWLLFLPRHG-------HNW-----QFESNLIRLSFRSIS 469
              G   Y  G      SD  LW+ + P+ G         W      F++ +   SF    
Sbjct: 1229 SYGSTRYDSGS----TSDPALWVTYFPQIGIPSKYRSRKWNNFKAHFDNPVGNASFTCGE 1284

Query: 470  DPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
            + ++KVK CG H IY  + + + + +++
Sbjct: 1285 NASFKVKSCGIHLIYAQDQKHWPQPSRK 1312



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 6/294 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G TS+ E+ SSI  L  L  L L GC+ L S P ++   + L  L L
Sbjct: 549 FSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMK-FESLEVLYL 607

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C  LKKFP+I  +ME L +LYL+ + I E+PSSI  L  LE+L L+ C N  + P   
Sbjct: 608 NCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIH 667

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             +K L+ L L GC K EN PDT   +  L  L +  + I+   SSI  +++L  L  S 
Sbjct: 668 GNMKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISC 727

Query: 180 CN--EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           C+  E       ++    NL  + +  +  +  S+  + SL  L L  C L         
Sbjct: 728 CSKFEKFPEIQGNMKCLKNLYLRKTA-IQELPNSIGSLTSLEILSLEKC-LKFEKFSDVF 785

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            N+  L+EL L+R+    LP SI  L +LE L L  C   +  P+I  N++ ++
Sbjct: 786 TNMGRLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLK 839



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 11/157 (7%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS L    + FP+I + +        D T I  L  ++  L  L  L L+ CKNL+ LP 
Sbjct: 869  CSNL----ERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPN 924

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  LK L  L+L+G S    F EIT   +QL  + L  T I  LP+SIE L G     L
Sbjct: 925  SICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLKSLEL 984

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             +C+NL +LP++I  L  L  ++   C KL N+ + L
Sbjct: 985  INCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNL 1021



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 101/219 (46%), Gaps = 38/219 (17%)

Query: 623 GCMSCYKK-WGRQTVRRQSPQEPGNCSRL----WEEADEFPDIVQVLSDGTDIRELSL-- 675
           G M C K  + R+T  ++ P   G+ + L     E+  +F     V ++   +REL L  
Sbjct: 739 GNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHR 798

Query: 676 --------AIELLFGLVQLTLNGCKNLER-----------------------LPRTISAL 704
                   +I  L  L  L L+ C N E+                       LP +I  L
Sbjct: 799 SGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRL 858

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           + L +L LSG S    FPEI  +   L  + L+ TAI GLP S+  L+     NL +CKN
Sbjct: 859 QALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKN 918

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LKSLP++I  L+SL  +  +GCS L+  +E    +E LE
Sbjct: 919 LKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLE 957



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 45/216 (20%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL------------ 679
           G   VR + P +P   SRLW+      DI    S    + EL   I+L            
Sbjct: 495 GWAIVREECPGDPCKWSRLWD----VDDIYDAFSRQECLEELK-GIDLSNSKQLVKMPKF 549

Query: 680 --LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR------------------ 719
             +  L +L L GC +L  L  +I  LK L+ LNL+G  + R                  
Sbjct: 550 SSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSFPSSMKFESLEVLYLNC 609

Query: 720 -----EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING 774
                +FPEI  + + L E++L  + I+ LP+SI  L+   + NL +C N +  P     
Sbjct: 610 CPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIHGN 669

Query: 775 LRSLRMMYPSGCSKLKNVTET---LGKVESLEVRLS 807
           ++ LR +Y  GC K +N  +T   +G +  L +R S
Sbjct: 670 MKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKS 705



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + I+EL  +I  L  L  L L+ C N E+ P+    +K+L  L L G  KF  FP+  + 
Sbjct: 634 SGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIHGNMKFLRELYLEGCPKFENFPDTFTY 693

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L  +HL  + I+ LP+SI  L    + ++  C   +  P     ++ L+ +Y    +
Sbjct: 694 MGHLRRLHLRKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRK-T 752

Query: 788 KLKNVTETLGKVESLEV 804
            ++ +  ++G + SLE+
Sbjct: 753 AIQELPNSIGSLTSLEI 769



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 10/144 (6%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L++S  SKF +FPEI  +   L  ++L  TAI+ LP SI  L+ 
Sbjct: 707 IKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTS 766

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLR--MMYPSGCSKLKNVTETLGKVESLE-VRLSSWN 810
             + +L+ C   +        +  LR   ++ SG   +K +  ++G +ESLE + LS  +
Sbjct: 767 LEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSG---IKELPGSIGYLESLENLNLSYCS 823

Query: 811 R----PKMQNDFDCVEQSAVETVT 830
                P++Q +  C+++ ++E   
Sbjct: 824 NFEKFPEIQGNMKCLKELSLENTA 847


>gi|449447737|ref|XP_004141624.1| PREDICTED: uncharacterized protein LOC101204609 [Cucumis sativus]
          Length = 1040

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/415 (34%), Positives = 220/415 (53%), Gaps = 26/415 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G   + ++  S+  L  L  L L+ CK L+++P  IS L+ L+ L L
Sbjct: 87  FSGVPNLERLVLSGCVELHQLHHSLGNLNHLIQLDLRNCKKLTNIPFNIS-LESLKILVL 145

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS L  FP+I ++M  L +L+LD TSI  + SSI  L  L LL L  C +L++LPS+I
Sbjct: 146 SGCSNLTHFPKISSNMNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTI 205

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L SLKTLNL+GC KL+++P++LG + SLE+LD++ T + +   S  L+  L  L   G
Sbjct: 206 GSLTSLKTLNLNGCSKLDSLPESLGDISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQG 265

Query: 180 CNEPPASA---SWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
            +     +   +W     F     S+    L + +  T  CSL  L+LSDC L +  +P+
Sbjct: 266 LSRKFLHSLFPTWKFTRKF-----SNYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPN 320

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
           D+ +L SL+ L+L++N+F  LP SI  L+NL +L L +C  L SLP++P +++ V A  C
Sbjct: 321 DLHSLASLQILHLSKNHFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVREVEARDC 380

Query: 296 SSLVTLFGALKLCRSK---YTIINC------IDSLKLLRKNGLAI---SMLREYLELQAV 343
            SL   +   K   S     T I C       +S  + + +  AI   +  + Y+E+   
Sbjct: 381 VSLKEYYNKEKQIPSSELGITFIRCPISNEPSESYNIDQPHFSAIHVRTTTQRYIEVLTW 440

Query: 344 SDPGHKLSIVFPGSQIPKWFMYQNEGSSITV-TRPSYLYNVNKVVGFAICCVFQV 397
               +  S V P   +   F  +  G SIT    P Y+   N  +G A+   ++V
Sbjct: 441 QQVNY--SFVIPYPNLIACFEEKKYGFSITAHCPPDYISEENPRIGIALGAAYEV 493



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 11/176 (6%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VLS   ++ +L  ++  L  L+QL L  CK L  +P  IS L+ L  L LSG S    FP
Sbjct: 97  VLSGCVELHQLHHSLGNLNHLIQLDLRNCKKLTNIPFNIS-LESLKILVLSGCSNLTHFP 155

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +I+S+ + LLE+HL+ T+I+ L +SI  L+  +L NLK+C +L  LPSTI  L SL+ + 
Sbjct: 156 KISSNMNHLLELHLDETSIKVLHSSIGHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLN 215

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
            +GCSKL ++ E+LG + SLE         K+     CV Q+ + +   L K E+L
Sbjct: 216 LNGCSKLDSLPESLGDISSLE---------KLDITSTCVNQAPM-SFQLLTKLEIL 261



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 11/223 (4%)

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           SME L  + L  +           +P LE L L+ C  L +L  S+  L  L  L+L  C
Sbjct: 66  SMETLKVINLSDSQFLSKTPDFSGVPNLERLVLSGCVELHQLHHSLGNLNHLIQLDLRNC 125

Query: 134 CKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            KL N+P  +  +ESL+ L +SG    T   + +S+   M +L  L+    +     +S 
Sbjct: 126 KKLTNIPFNIS-LESLKILVLSGCSNLTHFPKISSN---MNHLLELHLDETSIKVLHSSI 181

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                  LL   +C   L LPS  G + SL  L+L+ C   + ++P  + ++ SL++L +
Sbjct: 182 GHLTSLVLLNLKNCTDLLKLPSTIGSLTSLKTLNLNGCSKLD-SLPESLGDISSLEKLDI 240

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
                   P S   L  LE L  +   R + L  + P  +F R
Sbjct: 241 TSTCVNQAPMSFQLLTKLEILNCQGLSR-KFLHSLFPTWKFTR 282


>gi|296089455|emb|CBI39274.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/452 (31%), Positives = 204/452 (45%), Gaps = 84/452 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR----- 55
             +M  L +L L G+ I E+P SI  L  LE L L+ C N    P    ++KCL+     
Sbjct: 247 FTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLE 306

Query: 56  ------------------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                              L+LSGCS L++FP+I  +M +L  L+LD T+I  +P S+  
Sbjct: 307 DTAIKELPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLPYSVGH 366

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L  LE L L  C+NL  LP+SI GLKSLK L+L+GC  LE   +    +E LE L +  T
Sbjct: 367 LTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEGLFLCET 426

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML---PSLTG 214
            I    SSI  ++ L+SL    C    A       LP N +G  +C  +L +   P L  
Sbjct: 427 GISELPSSIEHLRGLKSLELINCENLVA-------LP-NSIGNLTCLTSLHVRNCPKLHN 478

Query: 215 V--------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
           +        C LT LDL  C L E  IPSD+  L SL+ L ++ N+   +P  I+ L  L
Sbjct: 479 LPDNLRSQQCILTSLDLGGCNLMEEEIPSDLWCLSSLEFLNISENHMRCIPTGITHLCKL 538

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
             L +  C  L+ + ++P +L ++ A+GC  L T                          
Sbjct: 539 RTLLMNHCPMLEVIGELPSSLGWIEAHGCPCLET-------------------------- 572

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
              + S+L   L     S    + +I+ PGS  IP+W  +Q  G  ++V  P   Y  N 
Sbjct: 573 -ETSSSLLWSSLLKHLKSPIQRRFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNN 631

Query: 386 VVGFAICCVFQVPKHSTGTYLFHSYPAHELEC 417
           ++GF +               FH  P  + EC
Sbjct: 632 LLGFVL--------------FFHHVPLDDDEC 649



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 26/183 (14%)

Query: 647 CSRLWEEADEFPDIVQVLS---DGTDIRELSLAIELLFGLVQLTLNGCKNLER------- 696
           CS+  + +D F ++ ++      G+ I+EL  +I  L  L +L L  C N E+       
Sbjct: 237 CSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGN 296

Query: 697 ----------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                           LP  I  L+ L  L+LSG S    FPEI  +   L  + L+ TA
Sbjct: 297 MKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETA 356

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           IRGLP S+  L+     +L++C+NLKSLP++I GL+SL+ +  +GCS L+   E    +E
Sbjct: 357 IRGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEITEDME 416

Query: 801 SLE 803
            LE
Sbjct: 417 QLE 419



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 7/149 (4%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FP+I + +        D T IR L  ++  L  L +L L  C+NL+ LP +I  LK L
Sbjct: 335 ERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSL 394

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             L+L+G S    F EIT   +QL  + L  T I  LP+SIE L G     L +C+NL +
Sbjct: 395 KGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLELINCENLVA 454

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           LP++I  L  L  ++   C KL N+ + L
Sbjct: 455 LPNSIGNLTCLTSLHVRNCPKLHNLPDNL 483



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L+LS  SKF +FPEI  +   LL + L+ TAI+ LP SI  L+ 
Sbjct: 169 IKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTS 228

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLR--MMYPSGCSKLKNVTETLGKVESLEVRLSS--W 809
             + +L++C   +        +  LR   +Y SG  +L      L  +E L +R  S   
Sbjct: 229 LEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFE 288

Query: 810 NRPKMQNDFDCVEQSAVE 827
             P++Q +  C++   +E
Sbjct: 289 KFPEIQGNMKCLKMLCLE 306



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 33/264 (12%)

Query: 56  TLELSGCSKLKKFPQIVASMEDLS--KLYL---DGTSIAE----VPSSIELLPGLELLYL 106
           +L+LS   +++   ++ + M+ L   K+Y    DG +  E    +P   +    L  L+ 
Sbjct: 43  SLDLSRSREIQFNTKVFSKMKKLRLLKIYCNDHDGLTREEYKVLLPKDFQFPHDLRYLHW 102

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSG----------------CCKLENVPDTLGKVESLE 150
             C  L  LP + NG K L  +NL                  C K E  PDT   +  L 
Sbjct: 103 QRC-TLTSLPWNFNG-KHLIEINLKSSNVKQLWKGNRLYLERCSKFEKFPDTFTYMGHLR 160

Query: 151 ELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHLHLPFNLLGKSSCPVALM 208
            L +  + I+   SSI  +++L  L  S C+  E       ++    NL    +  +  +
Sbjct: 161 GLHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDET-AIKEL 219

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDI-DNLHSLKELYLNRNNFVTLPASISGLLNLE 267
             S+  + SL  L L +C   E    SD+  N+  L+EL L  +    LP SI  L +LE
Sbjct: 220 PNSIGSLTSLEMLSLRECSKFEKF--SDVFTNMGRLRELCLYGSGIKELPGSIGYLESLE 277

Query: 268 ELELEDCKRLQSLPQIPPNLQFVR 291
           EL L  C   +  P+I  N++ ++
Sbjct: 278 ELNLRYCSNFEKFPEIQGNMKCLK 301



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 7/140 (5%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I EL  +IE L GL  L L  C+NL  LP +I  L  L++L++    K    P+   S
Sbjct: 426 TGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRS 485

Query: 728 RDQLL-EIHLEGTAI--RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
           +  +L  + L G  +    +P+ +  LS     N+ +  +++ +P+ I  L  LR +  +
Sbjct: 486 QQCILTSLDLGGCNLMEEEIPSDLWCLSSLEFLNISE-NHMRCIPTGITHLCKLRTLLMN 544

Query: 785 GCSKLKNVTE---TLGKVES 801
            C  L+ + E   +LG +E+
Sbjct: 545 HCPMLEVIGELPSSLGWIEA 564



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           L L   SKF +FP+  +    L  +HL  + I+ LP+SI  L    + +L  C   +  P
Sbjct: 138 LYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFP 197

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
                ++ L  ++    + +K +  ++G + SLE+
Sbjct: 198 EIQGNMKCLLNLFLDE-TAIKELPNSIGSLTSLEM 231


>gi|356522594|ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/410 (33%), Positives = 206/410 (50%), Gaps = 59/410 (14%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G TS+TEV  S+     L ++ L+ CK L +LP  +  +  L+ L LSGCS+
Sbjct: 629 NLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNME-MSSLKYLNLSGCSE 687

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            K  P+   SME LS L L  T I ++PSS+  L GL  L L  CKNLV LP + + LKS
Sbjct: 688 FKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKS 747

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           LK L++ GC KL ++PD L +++ LE++ +S                         + PP
Sbjct: 748 LKFLDVRGCSKLCSLPDGLEEMKCLEQICLSADD----------------------SLPP 785

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           +     L+LP                      SL +++LS C L + +IP +  +L  L+
Sbjct: 786 SK----LNLP----------------------SLKRINLSYCNLSKESIPDEFCHLSHLQ 819

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
           +    RNNFVTLP+ IS L  LE L L  CK+LQ LP++P ++Q + A+ C+SL T    
Sbjct: 820 KTDPTRNNFVTLPSCISKLTKLELLILNLCKKLQRLPELPSSMQQLDASNCTSLETSKFN 879

Query: 305 LKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFM 364
               RS +     +   + L K  L   ++  +  +Q +  P  +  +   GS+IP WF+
Sbjct: 880 PSKPRSLFASPAKLHFPREL-KGHLPRELIGLFENMQELCLPKTRFGMFITGSEIPSWFV 938

Query: 365 YQNEGSSITVTRPSYLYNVNKVVGFAICCV---FQVP----KHSTGTYLF 407
            +   S   +  P +   VN+ VGFA+C +   + VP    +H    YLF
Sbjct: 939 PRKSVSFAKIAVP-HNCPVNEWVGFALCFLLVSYAVPPEACRHEVDCYLF 987



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 6/154 (3%)

Query: 653 EADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI--SALKYLST 709
           + D  P++  ++ +G T + E+  ++     L  + L  CK L+ LP  +  S+LKYL  
Sbjct: 623 DFDAAPNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNMEMSSLKYL-- 680

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            NLSG S+F+  PE   S +QL  + L+ T I  LP+S+  L G    NLK+CKNL  LP
Sbjct: 681 -NLSGCSEFKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLP 739

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            T + L+SL+ +   GCSKL ++ + L +++ LE
Sbjct: 740 DTFHKLKSLKFLDVRGCSKLCSLPDGLEEMKCLE 773



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 105/222 (47%), Gaps = 42/222 (18%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           SM+ LS L L  T IT++PSS+  L GL  L LK CKNL  LP T   LK L+ L++ GC
Sbjct: 697 SMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGC 756

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC------------- 109
           SKL   P  +  M+ L ++ L       +P S   LP L+ + L+ C             
Sbjct: 757 SKLCSLPDGLEEMKCLEQICLSADD--SLPPSKLNLPSLKRINLSYCNLSKESIPDEFCH 814

Query: 110 -----------KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-T 157
                       N V LPS I+ L  L+ L L+ C KL+ +P+      S+++LD S  T
Sbjct: 815 LSHLQKTDPTRNNFVTLPSCISKLTKLELLILNLCKKLQRLPEL---PSSMQQLDASNCT 871

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
           ++    +S F     RSL+ S     PA     LH P  L G
Sbjct: 872 SLE---TSKFNPSKPRSLFAS-----PAK----LHFPRELKG 901



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 45/216 (20%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTD------------------- 669
           ++ GR  V  +SP +PG  SRLW E D   D V   + GTD                   
Sbjct: 493 QEMGRNIVFEESPNDPGKRSRLWSEKD--IDYVLTKNKGTDKIQGMVLNLVQPYDSEVLW 550

Query: 670 ----------IRELSLA-IELLFG-------LVQLTLNGCKNLERLP--RTISALKYLST 709
                     +R L L  ++L  G       L  L   GC  L+ LP       L+ L  
Sbjct: 551 NTGAFSKMGQLRLLKLCDMQLPLGLNCLPSALQVLHWRGCP-LKALPLWHGTKLLEKLKC 609

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSL 768
           ++LS     ++ P+  ++ + L  + LEG T++  +  S+       + NL+DCK LK+L
Sbjct: 610 IDLSFSKNLKQSPDFDAAPN-LESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTL 668

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           PS +  + SL+ +  SGCS+ K + E    +E L +
Sbjct: 669 PSNME-MSSLKYLNLSGCSEFKYLPEFGESMEQLSL 703



 Score = 42.4 bits (98), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 26/161 (16%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I +L  ++  L GL  L L  CKNL  LP T   LK L  L++ G SK    P+    
Sbjct: 709 TPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGCSKLCSLPDGLEE 768

Query: 728 RDQLLEIHLEGTAIRGLPAS---------IELLSGNI-----------LSNLKDC----K 763
              L +I L  +A   LP S         I L   N+           LS+L+       
Sbjct: 769 MKCLEQICL--SADDSLPPSKLNLPSLKRINLSYCNLSKESIPDEFCHLSHLQKTDPTRN 826

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           N  +LPS I+ L  L ++  + C KL+ + E    ++ L+ 
Sbjct: 827 NFVTLPSCISKLTKLELLILNLCKKLQRLPELPSSMQQLDA 867


>gi|147856257|emb|CAN79645.1| hypothetical protein VITISV_033789 [Vitis vinifera]
          Length = 1025

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 235/492 (47%), Gaps = 52/492 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G +I+ +P  IE  +  + L L+ CKNL SLP +I   K L++L  S CS+L+ FP
Sbjct: 194 LCLKGQTISLLP--IERASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFP 251

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           +I+ +ME+L  L+L+ T+I E+PSSI+ L  LE+L LN CKNLV LP SI  L  L+ L+
Sbjct: 252 EILENMENLRVLHLNKTAIKELPSSIKHLNRLEVLNLNGCKNLVTLPESICDLCFLEVLD 311

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           +  C KL  +P  LG+++SL+ L   G                     S C +  + +  
Sbjct: 312 VGYCSKLHKLPQNLGRLQSLKHLRACGLN-------------------STCCQLLSLSGL 352

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                  L G S      +L  +  + SL  L+LS C + E  IP++I +L SL++L L 
Sbjct: 353 CSLEKLILHG-SKLMQGEILSDICCLYSLEVLNLSCCSIDEGGIPTEICHLSSLRQLLLI 411

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
            N F ++P  ++ L  L  L+L  C+ L+ +P +P +L+ +  +GC+ L T  G L    
Sbjct: 412 GNLFRSIPXGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHGCTRLDTSSGLL---- 467

Query: 310 SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
              ++ NC  S+       +     + Y   +  +     +S+      +PKW  +  +G
Sbjct: 468 -WSSLFNCFKSV-------IQDFECKIYPREKRFTRVNLIISV---SCGMPKWISHHKKG 516

Query: 370 SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY 429
           + +    P   Y  N ++GF +  ++    + +   L +     +   ++     GH I 
Sbjct: 517 AKVVAKLPQNWYKNNDLLGFVLYSLYDPLDNESEETLENDATYFKYGLTL----RGHKIQ 572

Query: 430 FRGKFG-------HVVSDHLWLLFLPRHGHNWQFESNLIR---LSFRSIS-DPTWKVKRC 478
           F  +         + V   +W+ + P+     ++ SN  R    SF   S     KV+ C
Sbjct: 573 FVDELQFYPSCQCYDVVPKMWMTYYPKVEIVKKYPSNKWRQLTASFCGFSRGKAMKVEEC 632

Query: 479 GFHPIYMHEVEE 490
           G H IY H+ E+
Sbjct: 633 GIHLIYAHDHEK 644



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 70/103 (67%), Gaps = 1/103 (0%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G +I E+P+ IE    L+ L L+ CKNL  LP +I   K L TL  SGCS L+ FP
Sbjct: 668 LCLKGNAINELPT-IECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRSFP 726

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL 112
           +I+  +E+L +L+LDGT+I E+P+SI+ L GL+ L L++C +L
Sbjct: 727 EILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDL 769



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G  I EL   IE    L  L L  CKNLERLP +I   K L+TL  SG S  R FPEI  
Sbjct: 672 GNAINELP-TIECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRSFPEILE 730

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             + L E+HL+GTAI  LPASI+ L G    NL DC +L
Sbjct: 731 DVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDL 769



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 74/129 (57%)

Query: 675 LAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           L IE       L L  CKNLE LP +I   K L +L  S  S+ + FPEI  + + L  +
Sbjct: 204 LPIERASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRVL 263

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           HL  TAI+ LP+SI+ L+   + NL  CKNL +LP +I  L  L ++    CSKL  + +
Sbjct: 264 HLNKTAIKELPSSIKHLNRLEVLNLNGCKNLVTLPESICDLCFLEVLDVGYCSKLHKLPQ 323

Query: 795 TLGKVESLE 803
            LG+++SL+
Sbjct: 324 NLGRLQSLK 332



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 5/186 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M++L  L+L+ T+I E+PSSI+ L  LE+L L GCKNL +LP +I  L  L  L++ 
Sbjct: 254 LENMENLRVLHLNKTAIKELPSSIKHLNRLEVLNLNGCKNLVTLPESICDLCFLEVLDVG 313

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLV-RLPSS 118
            CSKL K PQ +  ++ L  L   G  S      S+  L  LE L L+  K +   + S 
Sbjct: 314 YCSKLHKLPQNLGRLQSLKHLRACGLNSTCCQLLSLSGLCSLEKLILHGSKLMQGEILSD 373

Query: 119 INGLKSLKTLNLSGCCKLEN--VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           I  L SL+ LNLS CC ++   +P  +  + SL +L + G   R     +  +  LR L 
Sbjct: 374 ICCLYSLEVLNLS-CCSIDEGGIPTEICHLSSLRQLLLIGNLFRSIPXGVNQLSMLRLLD 432

Query: 177 FSGCNE 182
              C E
Sbjct: 433 LGHCQE 438



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 1/103 (0%)

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           KL L G +I E+P+ IE    L+ L L ECKNL RLPSSI   KSL TL  SGC  L + 
Sbjct: 667 KLCLKGNAINELPT-IECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRSF 725

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           P+ L  VE+L EL + GTAI    +SI  ++ L+ L  S C +
Sbjct: 726 PEILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTD 768



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 119/278 (42%), Gaps = 30/278 (10%)

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           SLT L  S C  G  + P  ++++ +L+EL+L+      LPASI  L  L+ L L DC  
Sbjct: 710 SLTTLFCSGCS-GLRSFPEILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTD 768

Query: 277 LQSL--PQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISML 334
           L  L  P++PP+L+++  +  + L TL     L      +  C  S              
Sbjct: 769 LGLLQAPELPPSLRYLDVHSLTCLETLSSPSSL--LGVFLFKCFKSTI------------ 814

Query: 335 REYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICC 393
            E  E  +  D    + +V  G+  IP+W   Q +GS IT+  P   Y  +  +GFA+  
Sbjct: 815 -EEFECGSYWDKA--IGVVISGNNGIPEWISQQKKGSQITIELPMDWYRKDDFLGFALYS 871

Query: 394 VFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHN 453
            F +P    G     +    + EC        +     G+     S  + + + P+   +
Sbjct: 872 AF-IPMACDGLNCELNICGDQSECCHVDDVRFYCCEICGE-----SSQMCVTYYPKVAID 925

Query: 454 WQFESN---LIRLSFRSISDPTWKVKRCGFHPIYMHEV 488
            Q+ SN    ++ SFRS      +VK  GFH I   +V
Sbjct: 926 NQYWSNEWRRLKASFRSFDGTPVEVKEWGFHLICTGDV 963



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 4/84 (4%)

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           RE  E   SR +L    L+G AI  LP     L  + L  L++CKNL+ LPS+I   +SL
Sbjct: 656 RECQEDVQSRRKLC---LKGNAINELPTIECPLELDSLC-LRECKNLERLPSSICEFKSL 711

Query: 779 RMMYPSGCSKLKNVTETLGKVESL 802
             ++ SGCS L++  E L  VE+L
Sbjct: 712 TTLFCSGCSGLRSFPEILEDVENL 735



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 10/67 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLS-----SLP-----VTISS 50
           +  +++L +L+LDGT+I E+P+SI+ L GL+ L L  C +L       LP     + + S
Sbjct: 729 LEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDLGLLQAPELPPSLRYLDVHS 788

Query: 51  LKCLRTL 57
           L CL TL
Sbjct: 789 LTCLETL 795



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%)

Query: 657 FPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ + +        T I+EL  +I+ L  L  L LNGCKNL  LP +I  L +L  
Sbjct: 250 FPEILENMENLRVLHLNKTAIKELPSSIKHLNRLEVLNLNGCKNLVTLPESICDLCFLEV 309

Query: 710 LNLSGLSKFREFPE 723
           L++   SK  + P+
Sbjct: 310 LDVGYCSKLHKLPQ 323



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L+G  I  LP  IE  S      L++CKNL+SLP++I   +SL+ ++ S CS+L+   E 
Sbjct: 196 LKGQTISLLP--IERASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEI 253

Query: 796 LGKVESLEV 804
           L  +E+L V
Sbjct: 254 LENMENLRV 262


>gi|297741024|emb|CBI31336.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 158/500 (31%), Positives = 243/500 (48%), Gaps = 38/500 (7%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           DL  LY  G S+  +P+             K   NL S   ++  L  L+ ++LS    L
Sbjct: 18  DLRCLYFYGYSLKSLPND---------FNPKNLLNLKSSFFSLQVLANLKFMDLSHSKYL 68

Query: 66  KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            + P     + +L +L L+G  S+ +V SS+  L  L  L L  C+ L  LPSS   LKS
Sbjct: 69  IETPNF-RGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKS 127

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L+T  LSGC K +  P+  G +E L+EL     AI    SS   ++NL+ L F GC + P
Sbjct: 128 LETFILSGCSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGC-KGP 186

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           +S  W L        +SS  +  +L  L+G+ SL +L+LS+C L +    S +  L SL+
Sbjct: 187 SSTLWLLP------RRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLE 240

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-FG 303
           ELYL  N+FVTLP++IS L NL  L LE+CKRLQ LP++P ++ ++ A  C+SL  + + 
Sbjct: 241 ELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQ 300

Query: 304 ALKLC-------RSKYT--IINCIDSLKLLRKN--GLAISMLREYLELQAVSDPG---HK 349
            LK         + K+   ++    +L +L  +  G+ I     Y  +  V   G     
Sbjct: 301 VLKSLLPTGQHQKRKFMVPVVKPDTALAVLEASNPGIRIPHRASYQRIDPVVKLGIATVA 360

Query: 350 LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
           L    PGS+IP W  YQ+ GS +    P   +N N  +GFA    F    H +  ++  +
Sbjct: 361 LKAFIPGSRIPDWIRYQSSGSEVKAELPPNWFNSN-FLGFAFS--FVTCGHFSCLFMLKA 417

Query: 410 YPAHELECSMDGSGEGHYIYFRGKFGHVV-SDHLWLLFLPRHGHNWQFESNLIRLSFRSI 468
               +     D S     I     F   + +DH+ L ++P        +   I++SF ++
Sbjct: 418 DVLFDWTSRDDSSSVDIIIVEMISFKRRLETDHVCLCYVPLPQLRNCSQVTHIKVSFMAV 477

Query: 469 S-DPTWKVKRCGFHPIYMHE 487
           S +   ++KRCG   +Y +E
Sbjct: 478 SREGEIEIKRCGVGVVYSNE 497



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 15/140 (10%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL     +R++  ++  L  L+ L L  C+ L+ LP +   LK L T  LSG SKF+EFP
Sbjct: 84  VLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFP 143

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK---------------NLKS 767
           E   S + L E++ +  AI  LP+S   L    + + K CK               ++ S
Sbjct: 144 ENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLWLLPRRSSNSIGS 203

Query: 768 LPSTINGLRSLRMMYPSGCS 787
           +   ++GLRSL  +  S C+
Sbjct: 204 ILQPLSGLRSLIRLNLSNCN 223



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 18/133 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----LP----------- 45
             S++ L +LY D  +I  +PSS   L  L++L+ KGCK  SS    LP           
Sbjct: 146 FGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLWLLPRRSSNSIGSIL 205

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQ--IVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
             +S L+ L  L LS C+ L   P    +  +  L +LYL G     +PS+I  L  L L
Sbjct: 206 QPLSGLRSLIRLNLSNCN-LSDEPNLSSLGFLSSLEELYLGGNDFVTLPSTISQLSNLTL 264

Query: 104 LYLNECKNLVRLP 116
           L L  CK L  LP
Sbjct: 265 LGLENCKRLQVLP 277


>gi|359495270|ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 158/500 (31%), Positives = 243/500 (48%), Gaps = 31/500 (6%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            DL  LY  G S+  +P+       +EL        +  L   I  L  L+ ++LS    L
Sbjct: 592  DLRCLYFYGYSLKSLPNDFNPKNLVELSM--PYSRIKQLWKGIKVLANLKFMDLSHSKYL 649

Query: 66   KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
             + P     + +L +L L+G  S+ +V SS+  L  L  L L  C+ L  LPSS   LKS
Sbjct: 650  IETPNF-RGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKS 708

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L+T  LSGC K +  P+  G +E L+EL     AI    SS   ++NL+ L F GC + P
Sbjct: 709  LETFILSGCSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGC-KGP 767

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
            +S  W L        +SS  +  +L  L+G+ SL +L+LS+C L +    S +  L SL+
Sbjct: 768  SSTLWLLP------RRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLE 821

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-FG 303
            ELYL  N+FVTLP++IS L NL  L LE+CKRLQ LP++P ++ ++ A  C+SL  + + 
Sbjct: 822  ELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQ 881

Query: 304  ALKLC-------RSKYT--IINCIDSLKLLRKN--GLAISMLREYLELQAVSDPG---HK 349
             LK         + K+   ++    +L +L  +  G+ I     Y  +  V   G     
Sbjct: 882  VLKSLLPTGQHQKRKFMVPVVKPDTALAVLEASNPGIRIPHRASYQRIDPVVKLGIATVA 941

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
            L    PGS+IP W  YQ+ GS +    P   +N N  +GFA    F    H +  ++  +
Sbjct: 942  LKAFIPGSRIPDWIRYQSSGSEVKAELPPNWFNSN-FLGFAFS--FVTCGHFSCLFMLKA 998

Query: 410  YPAHELECSMDGSGEGHYIYFRGKFGHVV-SDHLWLLFLPRHGHNWQFESNLIRLSFRSI 468
                +     D S     I     F   + +DH+ L ++P        +   I++SF ++
Sbjct: 999  DVLFDWTSRDDSSSVDIIIVEMISFKRRLETDHVCLCYVPLPQLRNCSQVTHIKVSFMAV 1058

Query: 469  S-DPTWKVKRCGFHPIYMHE 487
            S +   ++KRCG   +Y +E
Sbjct: 1059 SREGEIEIKRCGVGVVYSNE 1078



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 15/140 (10%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL     +R++  ++  L  L+ L L  C+ L+ LP +   LK L T  LSG SKF+EFP
Sbjct: 665 VLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFP 724

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK---------------NLKS 767
           E   S + L E++ +  AI  LP+S   L    + + K CK               ++ S
Sbjct: 725 ENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLWLLPRRSSNSIGS 784

Query: 768 LPSTINGLRSLRMMYPSGCS 787
           +   ++GLRSL  +  S C+
Sbjct: 785 ILQPLSGLRSLIRLNLSNCN 804



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 18/133 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----LPVT--------- 47
             S++ L +LY D  +I  +PSS   L  L++L+ KGCK  SS    LP           
Sbjct: 727 FGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLWLLPRRSSNSIGSIL 786

Query: 48  --ISSLKCLRTLELSGCSKLKKFPQ--IVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
             +S L+ L  L LS C+ L   P    +  +  L +LYL G     +PS+I  L  L L
Sbjct: 787 QPLSGLRSLIRLNLSNCN-LSDEPNLSSLGFLSSLEELYLGGNDFVTLPSTISQLSNLTL 845

Query: 104 LYLNECKNLVRLP 116
           L L  CK L  LP
Sbjct: 846 LGLENCKRLQVLP 858



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 37/205 (18%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRE--------------LS 674
           ++ GR+ VR+QS +EPG  SRLW       DI  VL   T   +              L 
Sbjct: 487 QEMGREIVRQQSLEEPGKRSRLWFHE----DINGVLKKNTATEKIEGIFLNLSHLEEMLY 542

Query: 675 LAIELLFGLVQLTLNGCKNLERLPRTISALKYLST--LNLSGLSKF-------------- 718
              + L G+ +L L    N + + R       +    +N S   KF              
Sbjct: 543 FTTQALAGMNRLRLLKVYNSKNISRNFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYS 602

Query: 719 -REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRS 777
            +  P   + ++ L+E+ +  + I+ L   I++L+     +L   K L   P+   G+ +
Sbjct: 603 LKSLPNDFNPKN-LVELSMPYSRIKQLWKGIKVLANLKFMDLSHSKYLIETPN-FRGVTN 660

Query: 778 LRMMYPSGCSKLKNVTETLGKVESL 802
           L+ +   GC  L+ V  +LG +++L
Sbjct: 661 LKRLVLEGCVSLRKVHSSLGDLKNL 685


>gi|357462267|ref|XP_003601415.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355490463|gb|AES71666.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1289

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/236 (43%), Positives = 150/236 (63%), Gaps = 12/236 (5%)

Query: 61  GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           GC  LK FP+ +  M  L  L+L D ++I  +P+  + +  +  L L  CKNL+ LP+SI
Sbjct: 2   GCVDLKIFPKKL-EMFSLKMLFLSDCSNIKRLPNFGKNMTCITELNLLNCKNLISLPNSI 60

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           + LKSL+ LN+SGC K+ N+PD + ++ +LE++D+S TAIR    S+  + NL+ L    
Sbjct: 61  SNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRS 120

Query: 180 CNEPPASASWHLHLPFNLLGK--SSCPVA----LMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           C +P  ++SW+ HLPF   GK  S  P       + P L+G+ SLT+LDLSDC L +++I
Sbjct: 121 CRDPATNSSWNFHLPF---GKKFSFFPAQTTNLTLPPFLSGLSSLTELDLSDCNLTDSSI 177

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPA-SISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           P DID L SL+ L L+ NNFV LP   ++ L  L  LELED  +LQSLP +PP+++
Sbjct: 178 PHDIDCLSSLERLILSGNNFVCLPTHHLANLSKLHYLELEDFPQLQSLPILPPHVR 233



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 52  KCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECK 110
           K L  L L GC  LK+FP+ +  M+ L  L L D ++++ +P   + +  + +L L   K
Sbjct: 840 KILEILSLIGCVNLKRFPRTL-EMDSLKMLILSDCSNVSRLPEFGKTMTNMSVLNLMHYK 898

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
           N+V LP+SI+ LKSLK LN+ GC KL ++PD + +  +L++L+ S TA+     S+F ++
Sbjct: 899 NIVCLPNSISNLKSLKILNILGCSKLCSLPDGIKQNTALQDLNFSRTAVGEFDPSLFQLE 958

Query: 171 NLRSLYFSGCNEPPASASWHLHLPFNL 197
           NL+ L  SGC  P +++   L LP++ 
Sbjct: 959 NLKRLSLSGCGWPGSNSGRDLILPYDF 985



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 27/180 (15%)

Query: 4   MKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           M  L  L+L D ++I  +P+  + +T +  L L  CKNL SLP +IS+LK LR L +SGC
Sbjct: 15  MFSLKMLFLSDCSNIKRLPNFGKNMTCITELNLLNCKNLISLPNSISNLKSLRILNISGC 74

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL---------- 112
           SK+   P  +  +  L  + L  T+I ++  S+  L  L+ L L  C++           
Sbjct: 75  SKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRDPATNSSWNFHL 134

Query: 113 ---------------VRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSG 156
                          + LP  ++GL SL  L+LS C   + ++P  +  + SLE L +SG
Sbjct: 135 PFGKKFSFFPAQTTNLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERLILSG 194



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D ++++ +P   + +T + +L L   KN+  LP +IS+LK L+ L + GCSKL   P  +
Sbjct: 872 DCSNVSRLPEFGKTMTNMSVLNLMHYKNIVCLPNSISNLKSLKILNILGCSKLCSLPDGI 931

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC 109
                L  L    T++ E   S+  L  L+ L L+ C
Sbjct: 932 KQNTALQDLNFSRTAVGEFDPSLFQLENLKRLSLSGC 968



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 54/101 (53%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD ++I+ L    + +  + +L L  CKNL  LP +IS LK L  LN+SG SK    P+
Sbjct: 23  LSDCSNIKRLPNFGKNMTCITELNLLNCKNLISLPNSISNLKSLRILNISGCSKICNLPD 82

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
             +    L +I L  TAIR L  S+  L      +L+ C++
Sbjct: 83  GINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRD 123



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 24/114 (21%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           GC +L+  P+ +     L  L LS  S  +  P    +   + E+               
Sbjct: 2   GCVDLKIFPKKLEMFS-LKMLFLSDCSNIKRLPNFGKNMTCITEL--------------- 45

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
                   NL +CKNL SLP++I+ L+SLR++  SGCSK+ N+ + + ++ +LE
Sbjct: 46  --------NLLNCKNLISLPNSISNLKSLRILNISGCSKICNLPDGINQIMALE 91



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 35/145 (24%)

Query: 661 VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI--SALKYLSTLNLSGLSKF 718
           V  LS+GT +R   +       L  L+L GC NL+R PRT+   +LK L   + S +S+ 
Sbjct: 827 VNKLSNGTHVRNHKI-------LEILSLIGCVNLKRFPRTLEMDSLKMLILSDCSNVSRL 879

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
            EF +  ++   L                          NL   KN+  LP++I+ L+SL
Sbjct: 880 PEFGKTMTNMSVL--------------------------NLMHYKNIVCLPNSISNLKSL 913

Query: 779 RMMYPSGCSKLKNVTETLGKVESLE 803
           +++   GCSKL ++ + + +  +L+
Sbjct: 914 KILNILGCSKLCSLPDGIKQNTALQ 938


>gi|224127754|ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1125

 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 232/532 (43%), Gaps = 115/532 (21%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISS--------LKC-------------- 53
            S+ EV  SI+ LT LE+L L  C NL SLP  I S          C              
Sbjct: 672  SLIEVNPSIQYLTKLEVLQLSYCDNLRSLPSRIGSKVLRILDLYHCINVRICPAISGNSP 731

Query: 54   -LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL 112
             LR ++L  C+ + KFP+I  +++    LYL GT+I EVPSSIE L  L  LY+  CK L
Sbjct: 732  VLRKVDLQFCANITKFPEISGNIK---YLYLQGTAIEEVPSSIEFLTALVRLYMTNCKQL 788

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              +PSSI  LKSL+ L LSGC KLEN P+ +  +ESL  L++  TAI+   SSI  +K L
Sbjct: 789  SSIPSSICKLKSLEVLGLSGCSKLENFPEIMEPMESLRRLELDATAIKELPSSIKYLKFL 848

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
              L                      LG ++  +  +  S+  + SLT LDL    + E  
Sbjct: 849  TQLK---------------------LGVTA--IEELSSSIAQLKSLTHLDLGGTAIKE-- 883

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            +PS I++L  LK L L+                           ++ LP++P +L  +  
Sbjct: 884  LPSSIEHLKCLKHLDLSGTG------------------------IKELPELPSSLTALDV 919

Query: 293  NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
            N C SL TL    +     +  +N  +  KL +K  +A    +    +Q+    G    I
Sbjct: 920  NDCKSLQTLS---RFNLRNFQELNFANCFKLDQKKLMADVQCK----IQSGEIKGEIFQI 972

Query: 353  VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPA 412
            V P S+IP WF  QN GSS+T   P    N +++ G A C VF  P     T L      
Sbjct: 973  VLPKSEIPPWFRGQNMGSSVTKKLP---LNCHQIKGIAFCIVFASP-----TPLLSDCAN 1024

Query: 413  HELEC-SMDGSGEGHYIYF----------RGKFGHVVSDHLWLLF-LPRHGHNWQFESNL 460
               +C +   +GE  ++               F    SDH+ L +   R G   ++  + 
Sbjct: 1025 FSCKCDAKSDNGEHDHVNLLWYDLDPQPKAAVFKLDDSDHMLLWYESTRTGLTSEYSGSE 1084

Query: 461  IRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHD 512
            +   F    + + K+KRCG + ++               R +SC+ +  H D
Sbjct: 1085 VTFEFYDKIEHS-KIKRCGVYFLF------------DKNRSSSCDEDSSHQD 1123



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 110/190 (57%), Gaps = 21/190 (11%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL GT+I EVPSSIE LT L  L +  CK LSS+P +I  LK L  L LSGCSKL+ FP
Sbjct: 757 LYLQGTAIEEVPSSIEFLTALVRLYMTNCKQLSSIPSSICKLKSLEVLGLSGCSKLENFP 816

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           +I+  ME L +L LD T+I E+PSSI+ L  L  L L     +  L SSI  LKSL  L+
Sbjct: 817 EIMEPMESLRRLELDATAIKELPSSIKYLKFLTQLKLG-VTAIEELSSSIAQLKSLTHLD 875

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRR----PTS---------------SIFLMK 170
           L G   ++ +P ++  ++ L+ LD+SGT I+     P+S               S F ++
Sbjct: 876 LGGTA-IKELPSSIEHLKCLKHLDLSGTGIKELPELPSSLTALDVNDCKSLQTLSRFNLR 934

Query: 171 NLRSLYFSGC 180
           N + L F+ C
Sbjct: 935 NFQELNFANC 944



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 3/122 (2%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I E+  +IE L  LV+L +  CK L  +P +I  LK L  L LSG SK   FPEI  
Sbjct: 761 GTAIEEVPSSIEFLTALVRLYMTNCKQLSSIPSSICKLKSLEVLGLSGCSKLENFPEIME 820

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK-DCKNLKSLPSTINGLRSLRMMYPSG 785
             + L  + L+ TAI+ LP+SI+ L    L+ LK     ++ L S+I  L+SL  +   G
Sbjct: 821 PMESLRRLELDATAIKELPSSIKYL--KFLTQLKLGVTAIEELSSSIAQLKSLTHLDLGG 878

Query: 786 CS 787
            +
Sbjct: 879 TA 880



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 10/153 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L LD T+I E+PSSI+ L  L  L L G   +  L  +I+ LK L  L+L 
Sbjct: 819 MEPMESLRRLELDATAIKELPSSIKYLKFLTQLKL-GVTAIEELSSSIAQLKSLTHLDLG 877

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G + +K+ P  +  ++ L  L L GT I E+P   EL   L  L +N+CK+L  L S  N
Sbjct: 878 GTA-IKELPSSIEHLKCLKHLDLSGTGIKELP---ELPSSLTALDVNDCKSLQTL-SRFN 932

Query: 121 GLKSLKTLNLSGCCKLEN---VPDTLGKVESLE 150
            L++ + LN + C KL+    + D   K++S E
Sbjct: 933 -LRNFQELNFANCFKLDQKKLMADVQCKIQSGE 964



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 21/169 (12%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I++ +        D T I+EL  +I+ L  L QL L G   +E L  
Sbjct: 809 CSKL----ENFPEIMEPMESLRRLELDATAIKELPSSIKYLKFLTQLKL-GVTAIEELSS 863

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I+ LK L+ L+L G +  +E P        L  + L GT I+ LP   EL S     ++
Sbjct: 864 SIAQLKSLTHLDLGG-TAIKELPSSIEHLKCLKHLDLSGTGIKELP---ELPSSLTALDV 919

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKL---KNVTETLGKVESLEVR 805
            DCK+L++L S  N LR+ + +  + C KL   K + +   K++S E++
Sbjct: 920 NDCKSLQTL-SRFN-LRNFQELNFANCFKLDQKKLMADVQCKIQSGEIK 966


>gi|317415948|emb|CAR94514.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2048

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/381 (34%), Positives = 196/381 (51%), Gaps = 47/381 (12%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            LE L LKGC +LS++P  I+ L+ L    LSGCSKLKK P+I   M+ L KL+LDGT+I 
Sbjct: 664  LEQLILKGCTSLSAVPDDIN-LRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIE 722

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSI-NGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            E+P+SI+ L GL LL L +CKNL+ LP  I   L SL+ LN+SGC  L  +P+ LG +E 
Sbjct: 723  ELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC 782

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L+EL  S TAI+   +SI  + +L                        LL    C   L 
Sbjct: 783  LQELYASRTAIQELPTSIKHLTDL-----------------------TLLNLRECKNLLT 819

Query: 209  LPSL--TGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            LP +  T + SL  L+LS C  L E  +P ++ +L  L+ELY +      +P SIS L  
Sbjct: 820  LPDVICTNLTSLQILNLSGCSNLNE--LPENLGSLECLQELYASGTAISQIPESISQLSQ 877

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGC-------SSLVTLF-----GALKLCRSKYT 313
            L EL L+ C +LQSLP++P +++ V  + C       S+ +T++     G   L R ++ 
Sbjct: 878  LGELVLDGCSKLQSLPRLPFSIRAVSVHNCPLLQGAHSNKITVWPSAAAGFSFLNRQRH- 936

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
              + I     L    L     + + E     D   +    +  ++IP W   ++  S+IT
Sbjct: 937  --DDIAQAFWLPDKHLLWPFYQTFFEDAIRRD--ERFEYGYRSNEIPAWLSRRSTESTIT 992

Query: 374  VTRPSYLYNVNKVVGFAICCV 394
            +  P  +   +K +  A+C +
Sbjct: 993  IPLPHDVDGKSKWIKLALCFI 1013



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/206 (46%), Positives = 129/206 (62%), Gaps = 8/206 (3%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGC 62
           MK L  L+LDGT+I E+P+SI+ LTGL LL L+ CKNL SLP V  +SL  L+ L +SGC
Sbjct: 708 MKQLRKLHLDGTAIEELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGC 767

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI-NG 121
           S L + P+ + S+E L +LY   T+I E+P+SI+ L  L LL L ECKNL+ LP  I   
Sbjct: 768 SNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTN 827

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+ LNLSGC  L  +P+ LG +E L+EL  SGTAI +   SI  +  L  L   GC+
Sbjct: 828 LTSLQILNLSGCSNLNELPENLGSLECLQELYASGTAISQIPESISQLSQLGELVLDGCS 887

Query: 182 EPPASASWHLHLPFNLLGKS--SCPV 205
           +  +       LPF++   S  +CP+
Sbjct: 888 KLQSLP----RLPFSIRAVSVHNCPL 909



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L QL L GC +L  +P  I+ L+ L+   LSG SK ++ PEI     QL ++HL+GTAI 
Sbjct: 664 LEQLILKGCTSLSAVPDDIN-LRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIE 722

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            LP SI+ L+G IL NL+DCKNL SLP  I   L SL+++  SGCS L  + E LG +E 
Sbjct: 723 ELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC 782

Query: 802 LE 803
           L+
Sbjct: 783 LQ 784



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 2/157 (1%)

Query: 649 RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYL 707
           +L E  ++   + ++  DGT I EL  +I+ L GL+ L L  CKNL  LP  I ++L  L
Sbjct: 700 KLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTGLILLNLRDCKNLLSLPDVICTSLTSL 759

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             LN+SG S   E PE   S + L E++   TAI+ LP SI+ L+   L NL++CKNL +
Sbjct: 760 QILNVSGCSNLNELPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLT 819

Query: 768 LPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP  I   L SL+++  SGCS L  + E LG +E L+
Sbjct: 820 LPDVICTNLTSLQILNLSGCSNLNELPENLGSLECLQ 856



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 81/126 (64%), Gaps = 4/126 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLEL 59
           + S++ L +LY   T+I E+P+SI+ LT L LL L+ CKNL +LP V  ++L  L+ L L
Sbjct: 777 LGSLECLQELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNL 836

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC---KNLVRLP 116
           SGCS L + P+ + S+E L +LY  GT+I+++P SI  L  L  L L+ C   ++L RLP
Sbjct: 837 SGCSNLNELPENLGSLECLQELYASGTAISQIPESISQLSQLGELVLDGCSKLQSLPRLP 896

Query: 117 SSINGL 122
            SI  +
Sbjct: 897 FSIRAV 902



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 110/249 (44%), Gaps = 50/249 (20%)

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA----------IRRPTSSIFL--- 168
           L+ L  LNLS C KL   PD   KV +LE+L + G            +R  T+ I     
Sbjct: 638 LEKLAVLNLSDCQKLIKTPD-FDKVPNLEQLILKGCTSLSAVPDDINLRSLTNFILSGCS 696

Query: 169 -----------MKNLRSLYFSGC--NEPPASASWHLHLP-FNLLGKSSCPVALMLPSL-- 212
                      MK LR L+  G    E P S     HL    LL    C   L LP +  
Sbjct: 697 KLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIK---HLTGLILLNLRDCKNLLSLPDVIC 753

Query: 213 TGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           T + SL  L++S C  L E  +P ++ +L  L+ELY +R     LP SI  L +L  L L
Sbjct: 754 TSLTSLQILNVSGCSNLNE--LPENLGSLECLQELYASRTAIQELPTSIKHLTDLTLLNL 811

Query: 272 EDCKRLQSLPQIP----PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN 327
            +CK L +LP +      +LQ +  +GCS+L  L   L            ++ L+ L  +
Sbjct: 812 RECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENL----------GSLECLQELYAS 861

Query: 328 GLAISMLRE 336
           G AIS + E
Sbjct: 862 GTAISQIPE 870



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 5/122 (4%)

Query: 662 QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYLSTLNLSGLSKFRE 720
           ++ +  T I+EL  +I+ L  L  L L  CKNL  LP  I + L  L  LNLSG S   E
Sbjct: 785 ELYASRTAIQELPTSIKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNE 844

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLS--GNILSNLKDCKNLKSLPSTINGLRSL 778
            PE   S + L E++  GTAI  +P SI  LS  G ++  L  C  L+SLP     +R++
Sbjct: 845 LPENLGSLECLQELYASGTAISQIPESISQLSQLGELV--LDGCSKLQSLPRLPFSIRAV 902

Query: 779 RM 780
            +
Sbjct: 903 SV 904



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPA- 412
            FP S   +WF +Q+  SS T++ P  L   +  +G A+C  F V +H T        PA 
Sbjct: 1882 FPSSITLEWFGHQSNDSSATISLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAI 1941

Query: 413  -HELECSMDGSGEG-----HYIYFRGKFGHV-VSDHLWLLFLPRHGHNWQF-ESNLIRLS 464
             H L C+++   +       Y   + +F  + +   +W+ ++PR   + Q  E  ++  S
Sbjct: 1942 SHHLICNLESDRDSLESLHDYCTTKEEFLWLHLGGFVWVSYIPRAWFSDQLNECGVLEAS 2001

Query: 465  FRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQS 498
              S  +  + V++CG   +Y H+ EEF +T  +S
Sbjct: 2002 IASDHE-AFSVQKCGLRLVYQHDEEEFKQTISRS 2034



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 19/154 (12%)

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYP-- 411
            FP S   +WF  Q+ GSSI V  P +LY     +G A+C  F +  + T   L +  P  
Sbjct: 1674 FPSSITLEWFGDQSSGSSIRVPLPPHLYRATNWIGLALCTSFSIVDNPTAD-LDNLNPEI 1732

Query: 412  AHELECSMD---GSGEGHYIYFRGK-------FGHVVSDHLWLLFLPRHGHNWQF-ESNL 460
            +H L C ++   G+ E  + Y           FG  +    W+ ++PR   + Q  E ++
Sbjct: 1733 SHHLICHLESDRGTIEPLHDYCTTNEEFQWLPFGGFI----WVSYIPRAWFSDQLNECDV 1788

Query: 461  IRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
            +  SF S  +  + V  CG   +Y H+ EE  +T
Sbjct: 1789 LEASFASDHE-AFTVHECGLRLVYQHDEEEIKQT 1821



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 26/163 (15%)

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
            K +  FP ++I +WF +Q+ G S+ +  PS L      +G A+C  F V  HST   L +
Sbjct: 1456 KYNSCFPPNEIVEWFGHQSSGPSVKIPLPSNLCEDTNWIGLALCAYFSVLDHST-IDLEN 1514

Query: 409  SYP--AHELECSMD--------------GSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGH 452
              P  +H L C ++               S E  ++Y  G F       +WL ++PR   
Sbjct: 1515 LNPEISHNLTCLLETDESCLESLHGYSTNSQEFKWLYRMGGF-------IWLSYIPRCWF 1567

Query: 453  NWQF-ESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
            + Q  E   +  S  S    +  V RCG   IY+ + E   ET
Sbjct: 1568 SDQLKERGHLEASIGS-DHGSLGVHRCGLRLIYLEDEEGLKET 1609


>gi|224113213|ref|XP_002332638.1| predicted protein [Populus trichocarpa]
 gi|222832865|gb|EEE71342.1| predicted protein [Populus trichocarpa]
          Length = 687

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 164/557 (29%), Positives = 246/557 (44%), Gaps = 74/557 (13%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTIS---------- 49
           +  +K L  L L G S +  +P SI  L  L+ L L GC  L+SLP +I           
Sbjct: 135 IGVLKCLDQLDLSGCSRLASLPDSIGALKCLKSLNLSGCSRLASLPNSIGRLASLPDSIG 194

Query: 50  SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNE 108
            LKCL+ L L GCS L   P  +  ++ L  L L G S +A +P SI  L  L  L L +
Sbjct: 195 ELKCLKLLNLHGCSGLASLPDNIGELKSLKSLDLSGCSRLASLPDSIGELKCLITLNLTD 254

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG------------ 156
           C  L  LP  I  LK L TLNLSGC  L ++PD + +VE    LD+SG            
Sbjct: 255 CSGLTSLPDRIGELKCLDTLNLSGCSGLASLPDNIDRVEISYWLDLSGCSRLASLPDSIG 314

Query: 157 --------------TAIRRPTS---SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
                         T   R  S   SI  ++ L +L  SGC +  +  +  + L F  L 
Sbjct: 315 GQHWQLKCLYALNLTGCLRLESLPDSIDELRCLTTLDLSGCLKLASLPNNIIDLEFKGLD 374

Query: 200 KSSCPVALMLPSLTGVCSLT-KLDLSD-CGLGEAAI---PSDIDNLHSLKELYLNRNNFV 254
           K  C +      +  + S T KL   +   LG + +   P  + +L  L EL L+  +F 
Sbjct: 375 KQRCYMLSGFQKVEEIASSTYKLGCHEFLNLGNSRVLKTPERLGSLVWLTELRLSEIDFE 434

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL-----VTLFGALKLCR 309
            +PASI  L  L +L L+DCKRLQ LP++P  LQ + A+GC SL     + + G  +   
Sbjct: 435 RIPASIKHLTKLSKLYLDDCKRLQCLPELPSTLQVLIASGCISLKSVASIFMQGDREYEA 494

Query: 310 SKYTIINCID-----SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFM 364
            ++    C+        +++    L I  +   L  Q       ++ +  PGS++P+WF 
Sbjct: 495 QEFNFSGCLQLDQNSRTRIMGATRLRIQRMATSLFYQEYHGKPIRVRLCIPGSEVPEWFS 554

Query: 365 YQN-EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH-ELECSMDGS 422
           Y+N EGSS+ + +P++ +       F +C V    +           P + + EC +  S
Sbjct: 555 YKNREGSSVKIRQPAHWHRR-----FTLCAVVSFGQSG------ERRPVNIKCECHLI-S 602

Query: 423 GEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLI----RLSFRSISDPTWKVKRC 478
            +G  I     F  +  + +  L+   H   W   S          F+S    T  V  C
Sbjct: 603 KDGTQIDLNSYFYEIYEEKVRSLWEREHVFIWSVHSKCFFKEASFQFKSPWGATDVVVGC 662

Query: 479 GFHPIYMHEVEEFDETT 495
           G HP+ ++E E+ +  T
Sbjct: 663 GVHPLLVNEPEQPNPKT 679



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/317 (36%), Positives = 162/317 (51%), Gaps = 37/317 (11%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +K L  L L G S +  +P SI +L  L+ L L GC +L+SLP  I +LK L++L L
Sbjct: 63  LEKLKSLKSLNLHGCSGLASLPHSIGMLKSLDQLDLSGCSSLTSLPNNIDALKSLKSLNL 122

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGCS+L   P  +  ++ L +L L G S +A +P SI  L  L+ L L+ C  L  LP+S
Sbjct: 123 SGCSRLASLPNSIGVLKCLDQLDLSGCSRLASLPDSIGALKCLKSLNLSGCSRLASLPNS 182

Query: 119 ING----------LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIF 167
           I            LK LK LNL GC  L ++PD +G+++SL+ LD+SG + +     SI 
Sbjct: 183 IGRLASLPDSIGELKCLKLLNLHGCSGLASLPDNIGELKSLKSLDLSGCSRLASLPDSIG 242

Query: 168 LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK------- 220
            +K L +L  + C       S    LP + +G+  C   L L   +G+ SL         
Sbjct: 243 ELKCLITLNLTDC-------SGLTSLP-DRIGELKCLDTLNLSGCSGLASLPDNIDRVEI 294

Query: 221 ---LDLSDCGLGEAAIPSDIDNLH-SLKELY-LNRNNFV---TLPASISGLLNLEELELE 272
              LDLS C    A++P  I   H  LK LY LN    +   +LP SI  L  L  L+L 
Sbjct: 295 SYWLDLSGCS-RLASLPDSIGGQHWQLKCLYALNLTGCLRLESLPDSIDELRCLTTLDLS 353

Query: 273 DCKRLQSLPQIPPNLQF 289
            C +L SLP    +L+F
Sbjct: 354 GCLKLASLPNNIIDLEF 370



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 134/238 (56%), Gaps = 19/238 (7%)

Query: 70  QIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           Q +  ++ L  L L G S +A +P SI +L  L+ L L+ C +L  LP++I+ LKSLK+L
Sbjct: 61  QPLEKLKSLKSLNLHGCSGLASLPHSIGMLKSLDQLDLSGCSSLTSLPNNIDALKSLKSL 120

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           NLSGC +L ++P+++G ++ L++LD+SG + +     SI  +K L+SL  SGC+   +  
Sbjct: 121 NLSGCSRLASLPNSIGVLKCLDQLDLSGCSRLASLPDSIGALKCLKSLNLSGCSRLAS-- 178

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                LP N +G+    +A +  S+  +  L  L+L  C  G A++P +I  L SLK L 
Sbjct: 179 -----LP-NSIGR----LASLPDSIGELKCLKLLNLHGCS-GLASLPDNIGELKSLKSLD 227

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           L+  +   +LP SI  L  L  L L DC  L SLP     L+ +     +GCS L +L
Sbjct: 228 LSGCSRLASLPDSIGELKCLITLNLTDCSGLTSLPDRIGELKCLDTLNLSGCSGLASL 285



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 1/145 (0%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           +E L  L  L L+GC  L  LP +I  LK L  L+LSG S     P    +   L  ++L
Sbjct: 63  LEKLKSLKSLNLHGCSGLASLPHSIGMLKSLDQLDLSGCSSLTSLPNNIDALKSLKSLNL 122

Query: 737 EGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            G + +  LP SI +L      +L  C  L SLP +I  L+ L+ +  SGCS+L ++  +
Sbjct: 123 SGCSRLASLPNSIGVLKCLDQLDLSGCSRLASLPDSIGALKCLKSLNLSGCSRLASLPNS 182

Query: 796 LGKVESLEVRLSSWNRPKMQNDFDC 820
           +G++ SL   +      K+ N   C
Sbjct: 183 IGRLASLPDSIGELKCLKLLNLHGC 207



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + +  L   I+ L  L  L L+GC  L  LP +I  LK L  L+LSG S+    P+
Sbjct: 98  LSGCSSLTSLPNNIDALKSLKSLNLSGCSRLASLPNSIGVLKCLDQLDLSGCSRLASLPD 157

Query: 724 ITSSRDQLLEIHLEGTA-----------IRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
              +   L  ++L G +           +  LP SI  L    L NL  C  L SLP  I
Sbjct: 158 SIGALKCLKSLNLSGCSRLASLPNSIGRLASLPDSIGELKCLKLLNLHGCSGLASLPDNI 217

Query: 773 NGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             L+SL+ +  SGCS+L ++ +++G+++ L
Sbjct: 218 GELKSLKSLDLSGCSRLASLPDSIGELKCL 247



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 15/170 (8%)

Query: 649 RLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           +LW E      +  +    L   + +  L  +I +L  L QL L+GC +L  LP  I AL
Sbjct: 55  QLWNEGQPLEKLKSLKSLNLHGCSGLASLPHSIGMLKSLDQLDLSGCSSLTSLPNNIDAL 114

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCK 763
           K L +LNLSG S+    P        L ++ L G + +  LP SI  L      NL  C 
Sbjct: 115 KSLKSLNLSGCSRLASLPNSIGVLKCLDQLDLSGCSRLASLPDSIGALKCLKSLNLSGCS 174

Query: 764 NLKSLPSTINGLRS----------LRMMYPSGCSKLKNVTETLGKVESLE 803
            L SLP++I  L S          L+++   GCS L ++ + +G+++SL+
Sbjct: 175 RLASLPNSIGRLASLPDSIGELKCLKLLNLHGCSGLASLPDNIGELKSLK 224



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 77/172 (44%), Gaps = 35/172 (20%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP- 722
           LS  + +  L  +I +L  L QL L+GC  L  LP +I ALK L +LNLSG S+    P 
Sbjct: 122 LSGCSRLASLPNSIGVLKCLDQLDLSGCSRLASLPDSIGALKCLKSLNLSGCSRLASLPN 181

Query: 723 ---EITSSRD--------QLLEIH----------------------LEGTA-IRGLPASI 748
               + S  D        +LL +H                      L G + +  LP SI
Sbjct: 182 SIGRLASLPDSIGELKCLKLLNLHGCSGLASLPDNIGELKSLKSLDLSGCSRLASLPDSI 241

Query: 749 ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
             L   I  NL DC  L SLP  I  L+ L  +  SGCS L ++ + + +VE
Sbjct: 242 GELKCLITLNLTDCSGLTSLPDRIGELKCLDTLNLSGCSGLASLPDNIDRVE 293



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 81/185 (43%), Gaps = 9/185 (4%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + +  L  +I  L  L+ L L  C  L  LP  I  LK L TLNLSG S     P+
Sbjct: 228 LSGCSRLASLPDSIGELKCLITLNLTDCSGLTSLPDRIGELKCLDTLNLSGCSGLASLPD 287

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIE----LLSGNILSNLKDCKNLKSLPSTINGLRSL 778
                +    + L G + +  LP SI      L      NL  C  L+SLP +I+ LR L
Sbjct: 288 NIDRVEISYWLDLSGCSRLASLPDSIGGQHWQLKCLYALNLTGCLRLESLPDSIDELRCL 347

Query: 779 RMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
             +  SGC KL ++      +  LE +     R  M + F  VE+ A  T  KL   E L
Sbjct: 348 TTLDLSGCLKLASLPNN---IIDLEFKGLDKQRCYMLSGFQKVEEIASSTY-KLGCHEFL 403

Query: 839 RDSDS 843
              +S
Sbjct: 404 NLGNS 408



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 64/163 (39%), Gaps = 55/163 (33%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSG--------------------------LS 716
           L  L L GC  LE LP +I  L+ L+TL+LSG                          LS
Sbjct: 323 LYALNLTGCLRLESLPDSIDELRCLTTLDLSGCLKLASLPNNIIDLEFKGLDKQRCYMLS 382

Query: 717 KFREFPEITSSRDQL--------------------------LEIHLEGTAIRGLPASIEL 750
            F++  EI SS  +L                           E+ L       +PASI+ 
Sbjct: 383 GFQKVEEIASSTYKLGCHEFLNLGNSRVLKTPERLGSLVWLTELRLSEIDFERIPASIKH 442

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           L+      L DCK L+ LP   +   +L+++  SGC  LK+V 
Sbjct: 443 LTKLSKLYLDDCKRLQCLPELPS---TLQVLIASGCISLKSVA 482


>gi|147784070|emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]
          Length = 1135

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 241/500 (48%), Gaps = 31/500 (6%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            DL  LY  G S+  +P+       +EL        +  L   I  L  L+ ++LS    L
Sbjct: 572  DLRCLYFYGYSLKSLPNDFNPKNLIELSM--PYSRIKQLWKGIXVLANLKFMDLSHSKYL 629

Query: 66   KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
             + P     + +L +L L+G  S+ +V SS+  L  L  L L  C+ L  LPSS   LKS
Sbjct: 630  IETPNF-RGVTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKS 688

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L+T  LSGC K +  P+  G +E L+EL     AI    SS   ++NL+ L F GC + P
Sbjct: 689  LETFILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFKGC-KGP 747

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
            +S  W L        +SS  +  +L  L+G+ SL +L+LS+C L +    S +  L SL+
Sbjct: 748  SSTLWLLP------RRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLE 801

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-FG 303
            ELYL  N+FVTLP++IS L NL  L LE+CKRLQ LP++P ++ ++ A  C+SL  + + 
Sbjct: 802  ELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSLKDVSYQ 861

Query: 304  ALKLC-------RSKY--TIINCIDSLKLLRKN--GLAISMLREYLELQAVSDPG---HK 349
             LK         + K+   ++    +L +L  +  G+       Y  +  V   G     
Sbjct: 862  VLKSLLPTGQHQKRKFMVXVVKPDTALAVLEASNXGIRXXXRASYQRIBPVVKLGIAXXA 921

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
            L    PGS+IP W  YQ+ GS +    P   +N N  +GFA    F    H +  ++  +
Sbjct: 922  LKAFIPGSRIPDWIRYQSSGSEVKAELPPNWFNSN-FLGFAFS--FVTCGHFSCLFMLKA 978

Query: 410  YPAHELECSMDGSGEGHYIYFRGKFGHVVS-DHLWLLFLPRHGHNWQFESNLIRLSFRSI 468
                +     D S     I     F   +  DH+ L ++P        +   I++SF ++
Sbjct: 979  DVLFDWTSRDDSSSVDIIIVEMISFKRRLEXDHVCLCYVPLPQLRNCSQVTHIKVSFMAV 1038

Query: 469  S-DPTWKVKRCGFHPIYMHE 487
            S +   ++KRCG   +Y +E
Sbjct: 1039 SREGEIEIKRCGVGXVYSNE 1058



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 15/140 (10%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL     +R++  ++  L  L+ L L  C+ L+ LP +   LK L T  LSG SKF+EFP
Sbjct: 645 VLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFP 704

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK---------------NLKS 767
           E   S + L E++ +  AI  LP+S   L    + + K CK               ++ S
Sbjct: 705 ENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLWLLPRRSSNSIGS 764

Query: 768 LPSTINGLRSLRMMYPSGCS 787
           +   ++GLRSL  +  S C+
Sbjct: 765 ILQPLSGLRSLIRLNLSNCN 784



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 18/133 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----LPVT--------- 47
             S++ L +LY D  +I  +PSS   L  L++L+ KGCK  SS    LP           
Sbjct: 707 FGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLWLLPRRSSNSIGSIL 766

Query: 48  --ISSLKCLRTLELSGCSKLKKFPQ--IVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
             +S L+ L  L LS C+ L   P    +  +  L +LYL G     +PS+I  L  L L
Sbjct: 767 QPLSGLRSLIRLNLSNCN-LSDEPNLSSLGFLSSLEELYLGGNDFVTLPSTISQLSNLTL 825

Query: 104 LYLNECKNLVRLP 116
           L L  CK L  LP
Sbjct: 826 LGLENCKRLQVLP 838



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 41/207 (19%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           ++ GR+ VR+QS  EPG  SRLW       DI  VL   T   ++      L  L ++  
Sbjct: 467 QEMGREIVRQQSLXEPGKRSRLWFHE----DINXVLKKNTATEKIEGIFLNLSHLEEMLY 522

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSK-FR-----EFPEITSSRD------QLLEIHL 736
              + L R+ R    L+ L   N   +S+ F+     E  ++  S+D       L  ++ 
Sbjct: 523 FTTQALARMNR----LRLLKVYNSKNISRNFKDTSNMENCKVNFSKDFKFCYHDLRCLYF 578

Query: 737 EGTAIRGLPASI----------------ELLSG-NILSNLK--DCKNLKSLPSTIN--GL 775
            G +++ LP                   +L  G  +L+NLK  D  + K L  T N  G+
Sbjct: 579 YGYSLKSLPNDFNPKNLIELSMPYSRIKQLWKGIXVLANLKFMDLSHSKYLIETPNFRGV 638

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESL 802
            +L+ +   GC  L+ V  +LG +++L
Sbjct: 639 TNLKRLVLEGCVSLRKVHSSLGDLKNL 665


>gi|147862827|emb|CAN78931.1| hypothetical protein VITISV_024045 [Vitis vinifera]
          Length = 1454

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 234/569 (41%), Gaps = 120/569 (21%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR----- 55
              +M  L +LYL  + I E+P+SI  L  LE+L L  C N    P    +LKCL+     
Sbjct: 888  FTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLE 947

Query: 56   ------------------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                              +L LSGCS  ++FP+I   M  L  L+LD T I E+P SI  
Sbjct: 948  NTAIKELPNGIGCLQALESLALSGCSNFERFPEI--QMGKLWALFLDETPIKELPCSIGH 1005

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            L  L+ L L  C+NL  LP+SI GLKSL+ L+L+GC  LE   +    +E LE L +  T
Sbjct: 1006 LTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRET 1065

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV-- 215
             I    S I  ++ L SL    C    A       LP N +G  +C   L + + T +  
Sbjct: 1066 GITELPSLIGHLRGLESLELINCENLVA-------LP-NSIGSLTCLTTLRVRNCTKLRN 1117

Query: 216  ---------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
                     C L  LDL  C L E  IPSD+  L  L  L ++ N+   +PA I+ L  L
Sbjct: 1118 LPDNLRSLQCCLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSENHIRCIPAGITQLSKL 1177

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
            + L +  C  L+ + ++P +L  + A+GC SL T           ++ +     LK  + 
Sbjct: 1178 KALFMNHCPMLEEIGEVPSSLTVMEAHGCPSLET---------ETFSSLLWSSLLKRFKS 1228

Query: 327  NGLAISMLREYLELQAVSDPG---HKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYN 382
                  +  E+ E     D      + SI+ PGS  IP+W  +Q  G  +++  P   Y 
Sbjct: 1229 -----PIQPEFFEPNFFLDLDFYPQRFSILLPGSNGIPEWVSHQRMGCEVSIELPMNWYE 1283

Query: 383  VNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM---------------DGSGEGHY 427
             +  +GF +               FH  P  + EC                 D S     
Sbjct: 1284 DDNFLGFVL--------------FFHHVPLDDDECETTEGSIPHCELTISHGDQSERLEE 1329

Query: 428  IYFRGKFGHVVSDHL-----------------WLLFLP------------RHGHNWQFES 458
            I F  K    ++ HL                 W+ + P            R+     F +
Sbjct: 1330 ISFYFKCKTYLASHLLSGKHCYDSDSTPDPAIWVTYFPQIDIPSEYRSRRRNNFKXHFHT 1389

Query: 459  NLIRLSFRSISDPTWKVKRCGFHPIYMHE 487
             +   SF+   +  +KVK CG H +Y  +
Sbjct: 1390 PIGVGSFKCGDNACFKVKSCGIHLLYAQD 1418



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 164/369 (44%), Gaps = 57/369 (15%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M  L +LYL+ + I E+PSSI  L  LE+L L  C NL   P    ++K LR L L G
Sbjct: 724  GNMGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEG 783

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CSK +KF      ME L  L+L  + I E+PSSI  L  LE+L L+ C    + P     
Sbjct: 784  CSKFEKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGN 843

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYF--S 178
            +K LK L L     ++ +P+++G + SLE L +         S IF  M  LR LY   S
Sbjct: 844  MKCLKELYLDNTA-IKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRES 902

Query: 179  GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-------VC--------------- 216
            G  E P S  +   L   +L  S C      P + G       +C               
Sbjct: 903  GIKELPNSIGYLESL--EILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGC 960

Query: 217  --SLTKLDLSDCG-----------------LGEAAI---PSDIDNLHSLKELYL-NRNNF 253
              +L  L LS C                  L E  I   P  I +L  LK L L N  N 
Sbjct: 961  LQALESLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNL 1020

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALKLC 308
             +LP SI GL +LE L L  C  L++  +I  +++     F+R  G + L +L G L+  
Sbjct: 1021 RSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGL 1080

Query: 309  RSKYTIINC 317
             S   +INC
Sbjct: 1081 ES-LELINC 1088



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 144/299 (48%), Gaps = 22/299 (7%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G  S+ E+  SI  L  L  L L GC+ L S P  +   + L  L L
Sbjct: 652 FSSMPNLERLNLEGCISLRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMK-FESLEVLYL 710

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C  LKKFP+I  +M  L +LYL+ + I E+PSSI  L  LE+L L+ C NL + P   
Sbjct: 711 DRCQNLKKFPKIHGNMGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIH 770

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             +K L+ L+L GC K E   DT   +E L  L +  + I+   SSI  +++L  L  S 
Sbjct: 771 GNMKFLRELHLEGCSKFEKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSY 830

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLP---------SLTGVCSLTKLDLSDCGLGE 230
           C++              + G   C   L L          S+  + SL  L L +C   E
Sbjct: 831 CSKFEKFPE--------IKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFE 882

Query: 231 AAIPSDI-DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
               SDI  N+  L+ELYL  +    LP SI  L +LE L L  C   Q  P+I  NL+
Sbjct: 883 KF--SDIFTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLK 939



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 5/147 (3%)

Query: 655  DEFPDIVQ-----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            + FP+I       +  D T I+EL  +I  L  L  L L  C+NL  LP +I  LK L  
Sbjct: 976  ERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNLRSLPNSICGLKSLER 1035

Query: 710  LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            L+L+G S    F EIT   ++L  + L  T I  LP+ I  L G     L +C+NL +LP
Sbjct: 1036 LSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELINCENLVALP 1095

Query: 770  STINGLRSLRMMYPSGCSKLKNVTETL 796
            ++I  L  L  +    C+KL+N+ + L
Sbjct: 1096 NSIGSLTCLTTLRVRNCTKLRNLPDNL 1122



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP  I  L+ L +L LSG S F  FPEI   +  L  + L+ T I+ LP SI  L+ 
Sbjct: 951  IKELPNGIGCLQALESLALSGCSNFERFPEIQMGK--LWALFLDETPIKELPCSIGHLTR 1008

Query: 754  NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
                +L++C+NL+SLP++I GL+SL  +  +GCS L+  +E    +E LE
Sbjct: 1009 LKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLE 1058



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +REL L+I  L  L  L L GC+ L+  P  +   + L  L L      ++FP+I  +  
Sbjct: 669 LRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMK-FESLEVLYLDRCQNLKKFPKIHGNMG 727

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L E++L  + I+ LP+SI  L+   + NL +C NL+  P     ++ LR ++  GCSK 
Sbjct: 728 HLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKF 787

Query: 790 KNVTETLGKVESL 802
           +  ++T   +E L
Sbjct: 788 EKFSDTFTYMEHL 800



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           ++I+EL  +I  L  L  L L+ C NLE+ P     +K+L  L+L G SKF +F +  + 
Sbjct: 737 SEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEKFSDTFTY 796

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L  +HL  + I+ LP+SI  L    + +L  C   +  P     ++ L+ +Y    +
Sbjct: 797 MEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDN-T 855

Query: 788 KLKNVTETLGKVESLEV 804
            +K +  ++G + SLE+
Sbjct: 856 AIKELPNSMGSLTSLEI 872



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 6/146 (4%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G   ++ LP +I  L+ L  L+LS  SKF +FPEI  +   L E++L+ TAI+ LP S+ 
Sbjct: 806 GESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMG 865

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
            L+   + +LK+C   +        +  LR +Y    S +K +  ++G +ESLE+   S+
Sbjct: 866 SLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRE-SGIKELPNSIGYLESLEILNLSY 924

Query: 810 -----NRPKMQNDFDCVEQSAVETVT 830
                  P++Q +  C+++  +E   
Sbjct: 925 CSNFQKFPEIQGNLKCLKELCLENTA 950



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 2/176 (1%)

Query: 632  GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
            G +++ R S     N     E  ++   +  +    T I EL   I  L GL  L L  C
Sbjct: 1029 GLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELINC 1088

Query: 692  KNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEIHLEGTAIRGLPASIEL 750
            +NL  LP +I +L  L+TL +   +K R  P+ + S +  LL + L G  +       +L
Sbjct: 1089 ENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSDL 1148

Query: 751  LSGNILSNLKDCKN-LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
               ++L +L   +N ++ +P+ I  L  L+ ++ + C  L+ + E    +  +E  
Sbjct: 1149 WCLSLLVSLDVSENHIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAH 1204


>gi|357462269|ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 1743

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/318 (35%), Positives = 172/318 (54%), Gaps = 37/318 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           + +L  L +  + I ++ +  E    L+++ L   K+L   P  +S +  L  L  + C 
Sbjct: 599 LDELVHLQMINSKIKQLWNGNEYYGKLKVIDLSNSKDLRQTP-NVSGIPNLEELYFNDCI 657

Query: 64  KLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLP------ 116
           KL +  Q +   + L  L L G   +   P  +E+   L++L+L+ C N+ RLP      
Sbjct: 658 KLVEVHQSIRQHKKLRILSLMGCVDLKIFPKKLEMF-SLKMLFLSYCSNIKRLPDFGKNM 716

Query: 117 ------------------SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
                             +SI  LKSL+ LN+SGC K+ N+PD + ++ +LE++D+S TA
Sbjct: 717 TCITELNLLNCENLLSLPNSICNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTA 776

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS-----SCPVALMLPS-L 212
           IR    S+  + NL+ L    C +P  ++SW+ HLPF   GK      +   +L LP  L
Sbjct: 777 IRDLDPSLLQLGNLKRLSLRSCRDPATNSSWNFHLPF---GKKFSFFPAQTTSLTLPPFL 833

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS-ISGLLNLEELEL 271
           +G+ SLT+LDLSDC L +++IP DID L SL+ L L+ NNFV LP   IS L  L  LEL
Sbjct: 834 SGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERLILSGNNFVCLPTHYISNLSKLRYLEL 893

Query: 272 EDCKRLQSLPQIPPNLQF 289
           EDC +LQSLP + P ++ 
Sbjct: 894 EDCPQLQSLPMLQPQVRL 911


>gi|147792427|emb|CAN68030.1| hypothetical protein VITISV_003124 [Vitis vinifera]
          Length = 1039

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 137/399 (34%), Positives = 203/399 (50%), Gaps = 46/399 (11%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+LTL+GC+ L SLP +    KCL++L   GCSKL  FP+I  +M  L +    GTSI 
Sbjct: 555 LEILTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREFNFSGTSIN 614

Query: 90  EVPSSIELLPGLELLYLNECKNLVR------------------------LPSSINGLKSL 125
           EVP SI+ L GLE L L +CK LV                         LPSSI  LK+L
Sbjct: 615 EVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLPSSIXHLKAL 674

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-FLMKNLRSLYF--SGCNE 182
           K L+LS C  L  +P+++  + SLE L ++G    +    +   M NLR L    +   E
Sbjct: 675 KNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLRVLRLDSTAIKE 734

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            P+S +    L +  L +SS    ++   +  + SL +L LS C +    IP+DI  L S
Sbjct: 735 IPSSITHLKALEYLNLSRSSIDGVVL--DICHLLSLKELHLSSCNI--RGIPNDIFCLSS 790

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
           L+ L L+ N+F ++PA IS L +L  L L  C +LQ +P++P +L+ +  +G S   +  
Sbjct: 791 LEILNLDGNHFSSIPAGISRLSHLTSLNLRHCNKLQQVPELPSSLRLLDVHGPSDGTSS- 849

Query: 303 GALKLCRSKYTIINCI-----DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
            +  L    ++++NC+     DS    R+N    S    +         G+ + IV PGS
Sbjct: 850 -SPSLLPPLHSLVNCLNSAIQDSENRSRRNWNGASFSDSWY-------SGNGICIVIPGS 901

Query: 358 Q-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
             IPKW   + +GS I +  P   +  N  +GFA+ CV+
Sbjct: 902 SGIPKWIKNKRKGSEIEIGLPQNWHLNNDFLGFALYCVY 940



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 91/170 (53%), Gaps = 16/170 (9%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +PSSI  L  L+ L L  C+NL  LP +I SL  L TL L+GC K K FP +   M +L 
Sbjct: 664 LPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLR 723

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING-------LKSLKTLNLSG 132
            L LD T+I E+PSSI  L  LE L      NL R  SSI+G       L SLK L+LS 
Sbjct: 724 VLRLDSTAIKEIPSSITHLKALEYL------NLSR--SSIDGVVLDICHLLSLKELHLSS 775

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            C +  +P+ +  + SLE L++ G       + I  + +L SL    CN+
Sbjct: 776 -CNIRGIPNDIFCLSSLEILNLDGNHFSSIPAGISRLSHLTSLNLRHCNK 824



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 8/183 (4%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLF------- 681
           ++ G   V ++ P++PG  SRLW    EF      L     +  LS ++ L+        
Sbjct: 493 QQMGWNIVHQECPKDPGGRSRLWGSDAEFVLTKNXLLXKLKVINLSYSVNLIKIPDFSSV 552

Query: 682 -GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
             L  LTL GC+ L+ LP +    K L +L+  G SK   FPEI  +  +L E +  GT+
Sbjct: 553 PNLEILTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREFNFSGTS 612

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           I  +P SI+ L+G     L+DCK L +    I  L SL+ +   GCSKLK +  ++  ++
Sbjct: 613 INEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKLKGLPSSIXHLK 672

Query: 801 SLE 803
           +L+
Sbjct: 673 ALK 675



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 24/196 (12%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C+ L  LPSS +  K L++L+  GC KL + P+  G +  L E + SGT
Sbjct: 552 VPNLEILTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSFPEINGNMGKLREFNFSGT 611

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           +I     SI  +  L  L    C +  A              ++   ++ +       CS
Sbjct: 612 SINEVPLSIKHLNGLEELLLEDCKKLVA------------FSENIGSLSSLKSLKLKGCS 659

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKR 276
             K            +PS I +L +LK L L+   N V LP SI  L +LE L L  C +
Sbjct: 660 KLK-----------GLPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLK 708

Query: 277 LQSLPQIPPNLQFVRA 292
            +  P +  ++  +R 
Sbjct: 709 FKGFPGVKGHMNNLRV 724



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 16/144 (11%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + ++ L  +I  L  L  L L+ C+NL RLP +I +L  L TL L+G  KF+ FP +   
Sbjct: 659 SKLKGLPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFPGVKGH 718

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING-------LRSLRM 780
            + L  + L+ TAI+ +P+SI        ++LK  + L    S+I+G       L SL+ 
Sbjct: 719 MNNLRVLRLDSTAIKEIPSSI--------THLKALEYLNLSRSSIDGVVLDICHLLSLKE 770

Query: 781 MYPSGCSKLKNVTETLGKVESLEV 804
           ++ S C+ ++ +   +  + SLE+
Sbjct: 771 LHLSSCN-IRGIPNDIFCLSSLEI 793



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 87/213 (40%), Gaps = 45/213 (21%)

Query: 645 GNCSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFG-----------LVQL 686
           G CS+L      FP+I   +         GT I E+ L+I+ L G           LV  
Sbjct: 585 GGCSKL----TSFPEINGNMGKLREFNFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAF 640

Query: 687 TLN-------------GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE 733
           + N             GC  L+ LP +I  LK L  L+LS        PE   S   L  
Sbjct: 641 SENIGSLSSLKSLKLKGCSKLKGLPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLET 700

Query: 734 IHLEG-TAIRGLPASIELLSGNILSNLK----DCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           + L G    +G P     + G+ ++NL+    D   +K +PS+I  L++L  +  S  S 
Sbjct: 701 LFLNGCLKFKGFPG----VKGH-MNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSRSSI 755

Query: 789 LKNVTETLGKVESLEVRLSSWNRPKMQNDFDCV 821
              V +    +   E+ LSS N   + ND  C+
Sbjct: 756 DGVVLDICHLLSLKELHLSSCNIRGIPNDIFCL 788


>gi|297734818|emb|CBI17052.3| unnamed protein product [Vitis vinifera]
          Length = 867

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 227/472 (48%), Gaps = 50/472 (10%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            + L L+ CKNL SLP +I   K L++L  S CS+L+ FP+++ ++E+L +L+L+ T+I 
Sbjct: 14  FDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEVLENIENLRELHLNETAIK 73

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           E+PSSIE L  LE+L L+ CKNLV LP SI+ L  L+ L++S C KL  +P  LG+++SL
Sbjct: 74  ELPSSIEHLNRLEVLNLDGCKNLVTLPESISNLCFLEVLDVSYCSKLHKLPQNLGRLQSL 133

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           + L   G                     S C +  + +         L G S      +L
Sbjct: 134 KHLHACGLN-------------------STCCQLLSLSGLCSLEKLILHG-SKLMQGEIL 173

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
             +  + SL  LDLS C + E  IP++I +L SL++L L  N F ++PA ++ L  L  L
Sbjct: 174 SDICCLYSLKALDLSFCSIDEGGIPTEICHLSSLRQLLLFGNLFRSIPAGVNQLSMLRLL 233

Query: 270 ELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGL 329
           +L  C+ L+ +P +P +L+ +  + C+ L T  G L       ++ NC  S+       +
Sbjct: 234 DLGHCQELRQIPALPSSLRVLDVHECTRLETSSGLL-----WSSLFNCFKSV-------I 281

Query: 330 AISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGF 389
                + Y   +  +     +S+      +PKW  +  +G+ +    P   Y  N ++GF
Sbjct: 282 QDFECKIYPREKRFTRVNLIISV---SCGMPKWISHHKKGAKVVAKLPQNWYKNNDLLGF 338

Query: 390 AICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFG-------HVVSDHL 442
            +  ++    + +   L +     +   ++     GH I F  +         + V   +
Sbjct: 339 VLYSLYDPLDNESEETLENDATYFKYGLTL----RGHKIQFVDELQFYPSCQCYDVVPKM 394

Query: 443 WLLFLPRHGHNWQFESNLIR---LSFRSIS-DPTWKVKRCGFHPIYMHEVEE 490
           W+ + P+     ++ SN  R    SF   S     KV+ CG H IY H+ E+
Sbjct: 395 WMTYYPKVEIVKKYPSNKWRQLTASFCGFSRGKAMKVEECGIHLIYAHDHEK 446



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 6/177 (3%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G +I E+P+ IE    L+ L L+ CKNL  LP +I   K L TL  SGCS L+ FP
Sbjct: 470 LCLKGNAINELPT-IECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRSFP 528

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           +I+  +E+L +L+LDGT+I E+P+SI+ L GL+ L L++C +LV LP SI  L SLK LN
Sbjct: 529 EILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDLVSLPESICNLSSLKILN 588

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS-----IFLMKNLRSLYFSGCN 181
           +S C KLE  P+ L  ++ LE+L  SG  +     S     I  +  LR L  S C 
Sbjct: 589 VSFCTKLEKFPENLRSLQCLEDLSASGLNLGMDCFSSILAGIIQLSKLRVLDLSHCQ 645



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 186/431 (43%), Gaps = 61/431 (14%)

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           KL L G +I E+P+ IE    L+ L L ECKNL RLPSSI   KSL TL  SGC  L + 
Sbjct: 469 KLCLKGNAINELPT-IECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRSF 527

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
           P+ L  VE+L EL + GTAI    +SI  ++ L+ L  S C +                 
Sbjct: 528 PEILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTD----------------- 570

Query: 200 KSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY-----LNRNNF 253
                  + LP S+  + SL  L++S C   E   P ++ +L  L++L      L  + F
Sbjct: 571 ------LVSLPESICNLSSLKILNVSFCTKLEK-FPENLRSLQCLEDLSASGLNLGMDCF 623

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
            ++ A I  L  L  L+L  C+ L   P++PP+L+++  +  + L TL     L      
Sbjct: 624 SSILAGIIQLSKLRVLDLSHCQGLLQAPELPPSLRYLDVHSLTCLETLSSPSSL--LGVF 681

Query: 314 IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSI 372
           +  C  S                  E +  S     + +V  G+  IP+W   Q +GS I
Sbjct: 682 LFKCFKS---------------TIEEFECGSYWDKAIRVVISGNNGIPEWISQQKKGSQI 726

Query: 373 TVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRG 432
           T+  P   Y  +  +GFA+   F +P    G     +    + EC        +     G
Sbjct: 727 TIELPMDWYRKDDFLGFALYSAF-IPMACDGLNCELNICGDQSECCHVDDVRFYCCEICG 785

Query: 433 KFGHVVSDHLWLLFLPRHGHNWQFESN---LIRLSFRSISDPTWKVKRCGFHPIYMHEVE 489
           +     S  + + + P+   + Q+ SN    ++ SFRS      +VK  GFH I     E
Sbjct: 786 E-----SSQMCVTYYPKVAIDNQYWSNEWRRLKASFRSFDGTPVEVKEWGFHLIC---TE 837

Query: 490 EFDETTKQSTR 500
             DE     TR
Sbjct: 838 YNDEQRSCDTR 848



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 80/137 (58%), Gaps = 1/137 (0%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G  I EL   IE    L  L L  CKNLERLP +I   K L+TL  SG S  R FPEI  
Sbjct: 474 GNAINELP-TIECPLELDSLCLRECKNLERLPSSICEFKSLTTLFCSGCSGLRSFPEILE 532

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
             + L E+HL+GTAI  LPASI+ L G    NL DC +L SLP +I  L SL+++  S C
Sbjct: 533 DVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDLVSLPESICNLSSLKILNVSFC 592

Query: 787 SKLKNVTETLGKVESLE 803
           +KL+   E L  ++ LE
Sbjct: 593 TKLEKFPENLRSLQCLE 609



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/118 (43%), Positives = 74/118 (62%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L  CKNLE LP +I   K L +L  S  S+ + FPE+  + + L E+HL  TAI+ LP
Sbjct: 17  LCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFPEVLENIENLRELHLNETAIKELP 76

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SIE L+   + NL  CKNL +LP +I+ L  L ++  S CSKL  + + LG+++SL+
Sbjct: 77  SSIEHLNRLEVLNLDGCKNLVTLPESISNLCFLEVLDVSYCSKLHKLPQNLGRLQSLK 134



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 3/185 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L +L+L+ T+I E+PSSIE L  LE+L L GCKNL +LP +IS+L  L  L++S
Sbjct: 56  LENIENLRELHLNETAIKELPSSIEHLNRLEVLNLDGCKNLVTLPESISNLCFLEVLDVS 115

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLV-RLPSS 118
            CSKL K PQ +  ++ L  L+  G  S      S+  L  LE L L+  K +   + S 
Sbjct: 116 YCSKLHKLPQNLGRLQSLKHLHACGLNSTCCQLLSLSGLCSLEKLILHGSKLMQGEILSD 175

Query: 119 INGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
           I  L SLK L+LS C   E  +P  +  + SL +L + G   R   + +  +  LR L  
Sbjct: 176 ICCLYSLKALDLSFCSIDEGGIPTEICHLSSLRQLLLFGNLFRSIPAGVNQLSMLRLLDL 235

Query: 178 SGCNE 182
             C E
Sbjct: 236 GHCQE 240



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 82/136 (60%), Gaps = 5/136 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+LDGT+I E+P+SI+ L GL+ L L  C +L SLP +I +L  L+ L +S
Sbjct: 531 LEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDLVSLPESICNLSSLKILNVS 590

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSI-----AEVPSSIELLPGLELLYLNECKNLVRL 115
            C+KL+KFP+ + S++ L  L   G ++     + + + I  L  L +L L+ C+ L++ 
Sbjct: 591 FCTKLEKFPENLRSLQCLEDLSASGLNLGMDCFSSILAGIIQLSKLRVLDLSHCQGLLQA 650

Query: 116 PSSINGLKSLKTLNLS 131
           P     L+ L   +L+
Sbjct: 651 PELPPSLRYLDVHSLT 666



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 14/135 (10%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +        DGT I EL  +I+ L GL  L L+ C +L  LP +I  L  L  
Sbjct: 527 FPEILEDVENLRELHLDGTAIEELPASIQYLRGLQYLNLSDCTDLVSLPESICNLSSLKI 586

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI------LSNLKDCK 763
           LN+S  +K  +FPE   S   L ++   G  + G+     +L+G I      + +L  C+
Sbjct: 587 LNVSFCTKLEKFPENLRSLQCLEDLSASGLNL-GMDCFSSILAGIIQLSKLRVLDLSHCQ 645

Query: 764 NLKSLPSTINGLRSL 778
            L   P     LR L
Sbjct: 646 GLLQAPELPPSLRYL 660



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 657 FPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP++++ + +        T I+EL  +IE L  L  L L+GCKNL  LP +IS L +L  
Sbjct: 52  FPEVLENIENLRELHLNETAIKELPSSIEHLNRLEVLNLDGCKNLVTLPESISNLCFLEV 111

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L++S  SK  + P+       L  +H  G
Sbjct: 112 LDVSYCSKLHKLPQNLGRLQSLKHLHACG 140


>gi|451798980|gb|AGF69188.1| TMV resistance protein N-like protein 2 [Vitis labrusca]
          Length = 1386

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 173/378 (45%), Gaps = 91/378 (24%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + +TEVP  IE    L+ L L GCKNL+SLP  I + K L TL  SGCS+L+ FP I+  
Sbjct: 1091 SDMTEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQD 1149

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ME L  LYLDGT+I E+PSSIE L GL+   L  C NLV LP SI  L SL+ L +  C 
Sbjct: 1150 MESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCP 1209

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
                +PD LG+++SL +L V                +L S+ F                 
Sbjct: 1210 NFRKLPDNLGRLQSLLQLSVG---------------HLDSMNFQ---------------- 1238

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                          LPSL+G+CSL  L L  C + E  IPS+I +L SL+ L L  N+F 
Sbjct: 1239 --------------LPSLSGLCSLRTLMLHACNIRE--IPSEIFSLSSLERLCLAGNHFS 1282

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
             +P  IS L NL  L+L  CK LQ +P++P     VR +    ++ + G       KY  
Sbjct: 1283 RIPDGISQLYNLTFLDLSHCKMLQHIPELPSG---VRRHKIQRVIFVQGC------KYRN 1333

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
            +                                   + +   + IP+W  +Q  G  IT+
Sbjct: 1334 VT----------------------------------TFIAESNGIPEWISHQKSGFKITM 1359

Query: 375  TRPSYLYNVNKVVGFAIC 392
              P   Y  +  +G  +C
Sbjct: 1360 KLPWSWYENDDFLGVVLC 1377



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 143/307 (46%), Gaps = 44/307 (14%)

Query: 98  LPGLELLYLNECK-----NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
           +P LE+L L  C      NL RLP  I   K L+TL+ +GC KLE  P+  G +  L  L
Sbjct: 638 VPNLEILTLEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVL 697

Query: 153 DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSL 212
           D+SGTAI    SSI  +  L++L    C      A  H  +P ++   SS  V       
Sbjct: 698 DLSGTAIMDLPSSITHLNGLQTLLLQEC------AKLH-KIPIHICHLSSLEV------- 743

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
                   LDL  C + E  IPSDI +L SL++L L R +F ++P +I+ L  LE L L 
Sbjct: 744 --------LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLS 795

Query: 273 DCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAIS 332
            C  L+ +P++P  L+ + A+G +   +    L L    ++++NC   ++  ++   + S
Sbjct: 796 HCSNLEQIPELPSRLRLLDAHGSNRTSSRAPFLPL----HSLVNCFSRVQDSKRTSFSDS 851

Query: 333 MLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
                         G    I  PG   IPK  M +          P   +  N+ +GFAI
Sbjct: 852 FYH-----------GKGTCIFLPGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAI 900

Query: 392 CCVFQVP 398
            CV+ VP
Sbjct: 901 FCVY-VP 906



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 3/165 (1%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + VP+ +E+LT LE  T+ GC NL  LP  I   K L+TL  +GCSKL++FP+I  +M 
Sbjct: 635 FSSVPN-LEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMR 692

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           +L  L L GT+I ++PSSI  L GL+ L L EC  L ++P  I  L SL+ L+L  C  +
Sbjct: 693 ELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIM 752

Query: 137 E-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           E  +P  +  + SL++L++         ++I  +  L  L  S C
Sbjct: 753 EGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHC 797



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 11/187 (5%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L +LYLDGT+I E+PSSIE L GL+  TL  C NL +LP +I +L  LR L + 
Sbjct: 1147 LQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVE 1206

Query: 61   GCSKLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             C   +K P  +  ++ L +L   +LD  +  ++P S+  L  L  L L+ C N+  +PS
Sbjct: 1207 RCPNFRKLPDNLGRLQSLLQLSVGHLDSMNF-QLP-SLSGLCSLRTLMLHAC-NIREIPS 1263

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLR 173
             I  L SL+ L L+G      +PD + ++ +L  LD+S       I    S +   K  R
Sbjct: 1264 EIFSLSSLERLCLAG-NHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR 1322

Query: 174  SLYFSGC 180
             ++  GC
Sbjct: 1323 VIFVQGC 1329



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 1/135 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D+ E+ + IE    L +L L GCKNL  LP  I   K L+TL  SG S+   FP+I   
Sbjct: 1091 SDMTEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQD 1149

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             + L  ++L+GTAI+ +P+SIE L G     L +C NL +LP +I  L SLR +    C 
Sbjct: 1150 MESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCP 1209

Query: 788  KLKNVTETLGKVESL 802
              + + + LG+++SL
Sbjct: 1210 NFRKLPDNLGRLQSL 1224



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
           T++GC NLERLPR I   K+L TL+ +G SK   FPEI  +  +L  + L GTAI  LP+
Sbjct: 650 TMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPS 709

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           SI  L+G     L++C  L  +P  I  L SL ++    C    N+ E  G + S    L
Sbjct: 710 SITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHC----NIME--GGIPSDICHL 763

Query: 807 SSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
           SS  +  ++        S   T+ +L++ E+L
Sbjct: 764 SSLQKLNLERGH---FSSIPTTINQLSRLEVL 792



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 689 GNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGH 748

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 749 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIP 804



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 26/166 (15%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FPDI+Q +        DGT I+E+  +IE L GL   TL  C NL  LP 
Sbjct: 1137 CSQL----ESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPD 1192

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI---HLEGTAIRGLPASIELLSGNIL 756
            +I  L  L  L +     FR+ P+       LL++   HL+    + LP+   L S   L
Sbjct: 1193 SICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNFQ-LPSLSGLCSLRTL 1251

Query: 757  SNLKDCKNLKSLPSTINGLRSLRMM---------YPSGCSKLKNVT 793
              L  C N++ +PS I  L SL  +          P G S+L N+T
Sbjct: 1252 M-LHAC-NIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLT 1295



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 647 CSRLWEEADEFPDI------VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I      ++VL   GT I +L  +I  L GL  L L  C  L ++P 
Sbjct: 678 CSKL----ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPI 733

Query: 700 TISALKYLSTLNLSGLSKFRE--FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
            I  L  L  L+L G     E   P        L +++LE      +P +I  LS   + 
Sbjct: 734 HICHLSSLEVLDL-GHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVL 792

Query: 758 NLKDCKNLKSLPSTINGLRSL 778
           NL  C NL+ +P   + LR L
Sbjct: 793 NLSHCSNLEQIPELPSRLRLL 813


>gi|359477823|ref|XP_002282797.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1400

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 173/378 (45%), Gaps = 91/378 (24%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + +TEVP  IE    L+ L L GCKNL+SLP  I + K L TL  SGCS+L+ FP I+  
Sbjct: 1105 SDMTEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQD 1163

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ME L  LYLDGT+I E+PSSIE L GL+   L  C NLV LP SI  L SL+ L +  C 
Sbjct: 1164 MESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCP 1223

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
                +PD LG+++SL +L V                +L S+ F                 
Sbjct: 1224 NFRKLPDNLGRLQSLLQLSVG---------------HLDSMNFQ---------------- 1252

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                          LPSL+G+CSL  L L  C + E  IPS+I +L SL+ L L  N+F 
Sbjct: 1253 --------------LPSLSGLCSLRTLMLHACNIRE--IPSEIFSLSSLERLCLAGNHFS 1296

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
             +P  IS L NL  L+L  CK LQ +P++P     VR +    ++ + G       KY  
Sbjct: 1297 RIPDGISQLYNLTFLDLSHCKMLQHIPELPSG---VRRHKIQRVIFVQGC------KYRN 1347

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
            +                                   + +   + IP+W  +Q  G  IT+
Sbjct: 1348 VT----------------------------------TFIAESNGIPEWISHQKSGFKITM 1373

Query: 375  TRPSYLYNVNKVVGFAIC 392
              P   Y  +  +G  +C
Sbjct: 1374 KLPWSWYENDDFLGVVLC 1391



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 143/307 (46%), Gaps = 44/307 (14%)

Query: 98  LPGLELLYLNECK-----NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
           +P LE+L L  C      NL RLP  I   K L+TL+ +GC KLE  P+  G +  L  L
Sbjct: 652 VPNLEILTLEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVL 711

Query: 153 DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSL 212
           D+SGTAI    SSI  +  L++L    C      A  H  +P ++   SS  V       
Sbjct: 712 DLSGTAIMDLPSSITHLNGLQTLLLQEC------AKLH-KIPIHICHLSSLEV------- 757

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
                   LDL  C + E  IPSDI +L SL++L L R +F ++P +I+ L  LE L L 
Sbjct: 758 --------LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLS 809

Query: 273 DCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAIS 332
            C  L+ +P++P  L+ + A+G +   +    L L    ++++NC   ++  ++   + S
Sbjct: 810 HCSNLEQIPELPSRLRLLDAHGSNRTSSRAPFLPL----HSLVNCFSRVQDSKRTSFSDS 865

Query: 333 MLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
                         G    I  PG   IPK  M +          P   +  N+ +GFAI
Sbjct: 866 FYH-----------GKGTCIFLPGGDVIPKGIMDRTNRHFERTELPQNWHQNNEFLGFAI 914

Query: 392 CCVFQVP 398
            CV+ VP
Sbjct: 915 FCVY-VP 920



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 3/165 (1%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + VP+ +E+LT LE  T+ GC NL  LP  I   K L+TL  +GCSKL++FP+I  +M 
Sbjct: 649 FSSVPN-LEILT-LEGCTMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMR 706

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           +L  L L GT+I ++PSSI  L GL+ L L EC  L ++P  I  L SL+ L+L  C  +
Sbjct: 707 ELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIM 766

Query: 137 E-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           E  +P  +  + SL++L++         ++I  +  L  L  S C
Sbjct: 767 EGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHC 811



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 11/187 (5%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L +LYLDGT+I E+PSSIE L GL+  TL  C NL +LP +I +L  LR L + 
Sbjct: 1161 LQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVE 1220

Query: 61   GCSKLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             C   +K P  +  ++ L +L   +LD  +  ++P S+  L  L  L L+ C N+  +PS
Sbjct: 1221 RCPNFRKLPDNLGRLQSLLQLSVGHLDSMNF-QLP-SLSGLCSLRTLMLHAC-NIREIPS 1277

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLR 173
             I  L SL+ L L+G      +PD + ++ +L  LD+S       I    S +   K  R
Sbjct: 1278 EIFSLSSLERLCLAG-NHFSRIPDGISQLYNLTFLDLSHCKMLQHIPELPSGVRRHKIQR 1336

Query: 174  SLYFSGC 180
             ++  GC
Sbjct: 1337 VIFVQGC 1343



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 1/135 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D+ E+ + IE    L +L L GCKNL  LP  I   K L+TL  SG S+   FP+I   
Sbjct: 1105 SDMTEVPI-IENPLELDRLCLLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPDILQD 1163

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             + L  ++L+GTAI+ +P+SIE L G     L +C NL +LP +I  L SLR +    C 
Sbjct: 1164 MESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRVERCP 1223

Query: 788  KLKNVTETLGKVESL 802
              + + + LG+++SL
Sbjct: 1224 NFRKLPDNLGRLQSL 1238



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 9/152 (5%)

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
           T++GC NLERLPR I   K+L TL+ +G SK   FPEI  +  +L  + L GTAI  LP+
Sbjct: 664 TMHGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPS 723

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           SI  L+G     L++C  L  +P  I  L SL ++    C    N+ E  G + S    L
Sbjct: 724 SITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHC----NIME--GGIPSDICHL 777

Query: 807 SSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
           SS  +  ++        S   T+ +L++ E+L
Sbjct: 778 SSLQKLNLERGH---FSSIPTTINQLSRLEVL 806



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 703 GNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGH 762

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 763 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIP 818



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 78/166 (46%), Gaps = 26/166 (15%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FPDI+Q +        DGT I+E+  +IE L GL   TL  C NL  LP 
Sbjct: 1151 CSQL----ESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPD 1206

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI---HLEGTAIRGLPASIELLSGNIL 756
            +I  L  L  L +     FR+ P+       LL++   HL+    + LP+   L S   L
Sbjct: 1207 SICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNFQ-LPSLSGLCSLRTL 1265

Query: 757  SNLKDCKNLKSLPSTINGLRSLRMM---------YPSGCSKLKNVT 793
              L  C N++ +PS I  L SL  +          P G S+L N+T
Sbjct: 1266 M-LHAC-NIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLT 1309



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 647 CSRLWEEADEFPDI------VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I      ++VL   GT I +L  +I  L GL  L L  C  L ++P 
Sbjct: 692 CSKL----ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPI 747

Query: 700 TISALKYLSTLNLSGLSKFRE--FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
            I  L  L  L+L G     E   P        L +++LE      +P +I  LS   + 
Sbjct: 748 HICHLSSLEVLDL-GHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVL 806

Query: 758 NLKDCKNLKSLPSTINGLRSL 778
           NL  C NL+ +P   + LR L
Sbjct: 807 NLSHCSNLEQIPELPSRLRLL 827


>gi|317415954|emb|CAR94519.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 1625

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 231/489 (47%), Gaps = 61/489 (12%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            LE L L+GC +LS++P  I+ L+ L    LSGCSKLKK P+I   M+ L KL++DGT+I 
Sbjct: 662  LEQLILQGCTSLSAVPDNIN-LRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIE 720

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSI-NGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            E+P+SI  L GL LL L +CK+L+ LP  I   L SL+ LN+SGC  L  +P+ LG +E 
Sbjct: 721  ELPTSINHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC 780

Query: 149  LEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVAL 207
            L+EL  S T I+  PTSS    K+L  L                     LL    C   L
Sbjct: 781  LQELYASRTPIQVLPTSS----KHLTDL--------------------TLLNLRECKNLL 816

Query: 208  MLPSL--TGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
             LP +  T + SL  L+LS C  L E  +P ++ +L SL+ELY +      +P SIS L 
Sbjct: 817  TLPDVICTNLTSLQILNLSGCSNLNE--LPENLGSLESLQELYASGTAISQVPESISQLS 874

Query: 265  NLEELELEDCKRLQSLPQIPPNLQFVRANGC-------SSLVTLF-----GALKLCRSKY 312
             LEEL  + C +LQSLP++P +++ V  + C       S+ +T++     G   L R ++
Sbjct: 875  QLEELVFDGCSKLQSLPRLPFSIRAVSVHNCPLLQGADSNKITVWPSAAAGFSFLNRQRH 934

Query: 313  TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSI 372
               + I     L    L     + + E     D   +    +  ++IP W   ++  S+I
Sbjct: 935  ---DDIAQAFWLPDKHLLWPFYQTFFEGAIRRD--ERFEYGYRSNEIPAWLSRRSTESTI 989

Query: 373  TVTRPSYLYNVNKVVGFAICCVFQ----------VPKHSTGTYLFHSYPAHELECSMDGS 422
            T+  P  +    K +  A+C + +          VP+      L  +   H +E      
Sbjct: 990  TIPLPHDVDGKTKWIKLALCFICEAAQKHDSLEDVPEFDEELGLKFTR-NHRIELCTTED 1048

Query: 423  GEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHP 482
                 +    + G+     +   F+P+          LI+ +    S P  +V  CG   
Sbjct: 1049 PHERLLALDYRDGNFAGPFIHWCFIPQSDLAESSNKRLIQATITPDS-PRTRVTGCGLSL 1107

Query: 483  IYMHEVEEF 491
            IY+ +V +F
Sbjct: 1108 IYLEDVPKF 1116



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/206 (45%), Positives = 126/206 (61%), Gaps = 8/206 (3%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGC 62
           MK L  L++DGT+I E+P+SI  L GL LL L+ CK+L SLP V  +SL  L+ L +SGC
Sbjct: 706 MKQLRKLHVDGTAIEELPTSINHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGC 765

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI-NG 121
           S L + P+ + S+E L +LY   T I  +P+S + L  L LL L ECKNL+ LP  I   
Sbjct: 766 SNLNELPENLGSLECLQELYASRTPIQVLPTSSKHLTDLTLLNLRECKNLLTLPDVICTN 825

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+ LNLSGC  L  +P+ LG +ESL+EL  SGTAI +   SI  +  L  L F GC+
Sbjct: 826 LTSLQILNLSGCSNLNELPENLGSLESLQELYASGTAISQVPESISQLSQLEELVFDGCS 885

Query: 182 EPPASASWHLHLPFNLLGKS--SCPV 205
           +  +       LPF++   S  +CP+
Sbjct: 886 KLQSLP----RLPFSIRAVSVHNCPL 907



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L QL L GC +L  +P  I+ L+ L+   LSG SK ++ PEI     QL ++H++GTAI 
Sbjct: 662 LEQLILQGCTSLSAVPDNIN-LRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIE 720

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            LP SI  L+G  L NL+DCK+L SLP  I   L SL+++  SGCS L  + E LG +E 
Sbjct: 721 ELPTSINHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC 780

Query: 802 LE 803
           L+
Sbjct: 781 LQ 782



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 2/157 (1%)

Query: 649 RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYL 707
           +L E  ++   + ++  DGT I EL  +I  L GL  L L  CK+L  LP  I ++L  L
Sbjct: 698 KLPEIGEDMKQLRKLHVDGTAIEELPTSINHLNGLTLLNLRDCKSLLSLPDVICTSLTSL 757

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             LN+SG S   E PE   S + L E++   T I+ LP S + L+   L NL++CKNL +
Sbjct: 758 QILNVSGCSNLNELPENLGSLECLQELYASRTPIQVLPTSSKHLTDLTLLNLRECKNLLT 817

Query: 768 LPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP  I   L SL+++  SGCS L  + E LG +ESL+
Sbjct: 818 LPDVICTNLTSLQILNLSGCSNLNELPENLGSLESLQ 854



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 4/126 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLEL 59
           + S++ L +LY   T I  +P+S + LT L LL L+ CKNL +LP V  ++L  L+ L L
Sbjct: 775 LGSLECLQELYASRTPIQVLPTSSKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNL 834

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC---KNLVRLP 116
           SGCS L + P+ + S+E L +LY  GT+I++VP SI  L  LE L  + C   ++L RLP
Sbjct: 835 SGCSNLNELPENLGSLESLQELYASGTAISQVPESISQLSQLEELVFDGCSKLQSLPRLP 894

Query: 117 SSINGL 122
            SI  +
Sbjct: 895 FSIRAV 900



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 10/154 (6%)

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPA- 412
            FP S   +WF +Q+  SS T+  P  L   +  +G A+C  F V +H T        PA 
Sbjct: 1459 FPSSITLEWFGHQSNDSSATILLPHNLNLDSNWIGLAVCAYFSVLEHPTVDIDNLDIPAI 1518

Query: 413  -HELECSMDGSGEG-----HYIYFRGKFGHV-VSDHLWLLFLPRHGHNWQF-ESNLIRLS 464
             H L C+++   +       Y   + +F  + +   +W+ ++PR   + Q  E +++  S
Sbjct: 1519 SHHLICNLESERDSLESLHDYCTTKEEFLWLHLGGFVWVSYIPRAWFSDQLNECSVLEAS 1578

Query: 465  FRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQS 498
              S  +  + V++CG   +Y H+ EEF +T  +S
Sbjct: 1579 IASDHE-AFSVQKCGLRLVYQHDEEEFKQTISRS 1611



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 58/118 (49%), Gaps = 1/118 (0%)

Query: 662 QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYLSTLNLSGLSKFRE 720
           ++ +  T I+ L  + + L  L  L L  CKNL  LP  I + L  L  LNLSG S   E
Sbjct: 783 ELYASRTPIQVLPTSSKHLTDLTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNE 842

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
            PE   S + L E++  GTAI  +P SI  LS         C  L+SLP     +R++
Sbjct: 843 LPENLGSLESLQELYASGTAISQVPESISQLSQLEELVFDGCSKLQSLPRLPFSIRAV 900



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRT---- 56
           + S++ L +LY  GT+I++VP SI  L+ LE L   GC  L SLP    S++ +      
Sbjct: 847 LGSLESLQELYASGTAISQVPESISQLSQLEELVFDGCSKLQSLPRLPFSIRAVSVHNCP 906

Query: 57  -LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            L+ +  +K+  +P   A    L++   D  + A
Sbjct: 907 LLQGADSNKITVWPSAAAGFSFLNRQRHDDIAQA 940


>gi|359493406|ref|XP_002279885.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1351

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 237/569 (41%), Gaps = 120/569 (21%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR----- 55
              +M  L +LYL  + I E+P+SI  L  LE+L L  C N    P    +LKCL+     
Sbjct: 785  FTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLKCLKELCLE 844

Query: 56   ------------------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                              +L LSGCS  ++FP+I   M  L  L+LD T I E+P SI  
Sbjct: 845  NTAIKELPNGIGCLQALESLALSGCSNFERFPEI--QMGKLWALFLDETPIKELPCSIGH 902

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            L  L+ L L  C+NL  LP+SI GLKSL+ L+L+GC  LE   +    +E LE L +  T
Sbjct: 903  LTRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRET 962

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV-- 215
             I    S I  ++ L SL    C    A       LP N +G  +C   L + + T +  
Sbjct: 963  GITELPSLIGHLRGLESLELINCENLVA-------LP-NSIGSLTCLTTLRVRNCTKLRN 1014

Query: 216  ---------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
                     C L  LDL  C L E  IPSD+  L  L  L ++ N+   +PA I+ L  L
Sbjct: 1015 LPDNLRSLQCCLLWLDLGGCNLMEGEIPSDLWCLSLLVSLDVSENHIRCIPAGITQLSKL 1074

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
            + L +  C  L+ + ++P +L  + A+GC SL T           ++ +     LK  + 
Sbjct: 1075 KALFMNHCPMLEEIGEVPSSLTVMEAHGCPSLET---------ETFSSLLWSSLLKRFKS 1125

Query: 327  NGLAISMLREYLELQAVSDPG---HKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYN 382
                  +  E+ E     D      + SI+ PGS  IP+W  +Q  G  +++  P   Y 
Sbjct: 1126 -----PIQPEFFEPNFFLDLDFYPQRFSILLPGSNGIPEWVSHQRMGCEVSIELPMNWYE 1180

Query: 383  VNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM---------------DGSGEGHY 427
             +  +GF +               FH  P  + EC                 D S     
Sbjct: 1181 DDNFLGFVL--------------FFHHVPLDDDECETTEGSIPHCELTISHGDQSERLEE 1226

Query: 428  IYFRGKFGHVVSDHL-----------------WLLFLP----------RHGHNWQ--FES 458
            I F  K    ++ HL                 W+ + P          R  +N++  F +
Sbjct: 1227 ISFYFKCKTYLASHLLSGKHCYDSDSTPDPAIWVTYFPQIDIPSEYRSRRRNNFKDHFHT 1286

Query: 459  NLIRLSFRSISDPTWKVKRCGFHPIYMHE 487
             +   SF+   +  +KVK CG H +Y  +
Sbjct: 1287 PIGVGSFKCGDNACFKVKSCGIHLLYAQD 1315



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 164/369 (44%), Gaps = 57/369 (15%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M  L +LYL+ + I E+PSSI  L  LE+L L  C NL   P    ++K LR L L G
Sbjct: 621 GNMGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEG 680

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSK +KF      ME L  L+L  + I E+PSSI  L  LE+L L+ C    + P     
Sbjct: 681 CSKFEKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGN 740

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYF--S 178
           +K LK L L     ++ +P+++G + SLE L +         S IF  M  LR LY   S
Sbjct: 741 MKCLKELYLDNTA-IKELPNSMGSLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRES 799

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-------VC--------------- 216
           G  E P S  +   L   +L  S C      P + G       +C               
Sbjct: 800 GIKELPNSIGYLESL--EILNLSYCSNFQKFPEIQGNLKCLKELCLENTAIKELPNGIGC 857

Query: 217 --SLTKLDLSDCG-----------------LGEAAI---PSDIDNLHSLKELYL-NRNNF 253
             +L  L LS C                  L E  I   P  I +L  LK L L N  N 
Sbjct: 858 LQALESLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNL 917

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALKLC 308
            +LP SI GL +LE L L  C  L++  +I  +++     F+R  G + L +L G L+  
Sbjct: 918 RSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGL 977

Query: 309 RSKYTIINC 317
            S   +INC
Sbjct: 978 ES-LELINC 985



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 144/299 (48%), Gaps = 22/299 (7%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G  S+ E+  SI  L  L  L L GC+ L S P  +   + L  L L
Sbjct: 549 FSSMPNLERLNLEGCISLRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMK-FESLEVLYL 607

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C  LKKFP+I  +M  L +LYL+ + I E+PSSI  L  LE+L L+ C NL + P   
Sbjct: 608 DRCQNLKKFPKIHGNMGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIH 667

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             +K L+ L+L GC K E   DT   +E L  L +  + I+   SSI  +++L  L  S 
Sbjct: 668 GNMKFLRELHLEGCSKFEKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSY 727

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLP---------SLTGVCSLTKLDLSDCGLGE 230
           C++              + G   C   L L          S+  + SL  L L +C   E
Sbjct: 728 CSKFEKFPE--------IKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILSLKECLKFE 779

Query: 231 AAIPSDI-DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
               SDI  N+  L+ELYL  +    LP SI  L +LE L L  C   Q  P+I  NL+
Sbjct: 780 KF--SDIFTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFPEIQGNLK 836



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 5/147 (3%)

Query: 655  DEFPDIVQ-----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            + FP+I       +  D T I+EL  +I  L  L  L L  C+NL  LP +I  LK L  
Sbjct: 873  ERFPEIQMGKLWALFLDETPIKELPCSIGHLTRLKWLDLENCRNLRSLPNSICGLKSLER 932

Query: 710  LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            L+L+G S    F EIT   ++L  + L  T I  LP+ I  L G     L +C+NL +LP
Sbjct: 933  LSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELINCENLVALP 992

Query: 770  STINGLRSLRMMYPSGCSKLKNVTETL 796
            ++I  L  L  +    C+KL+N+ + L
Sbjct: 993  NSIGSLTCLTTLRVRNCTKLRNLPDNL 1019



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 34/207 (16%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEAD--------EFPDIVQVLSDGTDIRELSLAIEL- 679
           ++ G   VR + P +P   SRLW+  D        EF   ++V+ D +D ++L    +  
Sbjct: 492 RQMGWAIVRDEYPGDPSKWSRLWDVDDIYDAFSRQEFLGKLKVI-DLSDSKQLVKMPKFS 550

Query: 680 -LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSK--------------------- 717
            +  L +L L GC +L  L  +I  LK L+ LNL G  +                     
Sbjct: 551 SMPNLERLNLEGCISLRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMKFESLEVLYLDRC 610

Query: 718 --FREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
              ++FP+I  +   L E++L  + I+ LP+SI  L+   + NL +C NL+  P     +
Sbjct: 611 QNLKKFPKIHGNMGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNM 670

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESL 802
           + LR ++  GCSK +  ++T   +E L
Sbjct: 671 KFLRELHLEGCSKFEKFSDTFTYMEHL 697



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP  I  L+ L +L LSG S F  FPEI   +  L  + L+ T I+ LP SI  L+ 
Sbjct: 848 IKELPNGIGCLQALESLALSGCSNFERFPEIQMGK--LWALFLDETPIKELPCSIGHLTR 905

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
               +L++C+NL+SLP++I GL+SL  +  +GCS L+  +E    +E LE
Sbjct: 906 LKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLE 955



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           ++I+EL  +I  L  L  L L+ C NLE+ P     +K+L  L+L G SKF +F +  + 
Sbjct: 634 SEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEKFSDTFTY 693

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L  +HL  + I+ LP+SI  L    + +L  C   +  P     ++ L+ +Y    +
Sbjct: 694 MEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDN-T 752

Query: 788 KLKNVTETLGKVESLEV 804
            +K +  ++G + SLE+
Sbjct: 753 AIKELPNSMGSLTSLEI 769



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 6/146 (4%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G   ++ LP +I  L+ L  L+LS  SKF +FPEI  +   L E++L+ TAI+ LP S+ 
Sbjct: 703 GESGIKELPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMG 762

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
            L+   + +LK+C   +        +  LR +Y    S +K +  ++G +ESLE+   S+
Sbjct: 763 SLTSLEILSLKECLKFEKFSDIFTNMGLLRELYLRE-SGIKELPNSIGYLESLEILNLSY 821

Query: 810 -----NRPKMQNDFDCVEQSAVETVT 830
                  P++Q +  C+++  +E   
Sbjct: 822 CSNFQKFPEIQGNLKCLKELCLENTA 847



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 2/176 (1%)

Query: 632  GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
            G +++ R S     N     E  ++   +  +    T I EL   I  L GL  L L  C
Sbjct: 926  GLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLESLELINC 985

Query: 692  KNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEIHLEGTAIRGLPASIEL 750
            +NL  LP +I +L  L+TL +   +K R  P+ + S +  LL + L G  +       +L
Sbjct: 986  ENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLMEGEIPSDL 1045

Query: 751  LSGNILSNLKDCKN-LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
               ++L +L   +N ++ +P+ I  L  L+ ++ + C  L+ + E    +  +E  
Sbjct: 1046 WCLSLLVSLDVSENHIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVMEAH 1101


>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1400

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 209/369 (56%), Gaps = 29/369 (7%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ E+PSSI  L  L+ L L  C +L  LP +I +L  L+ L+LSGCS L + P  + +
Sbjct: 943  SSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGN 1002

Query: 75   MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            + +L  L L + +S+ E+PSSI  L  L+ LYL+EC +LV LPSSI  L +LK L+LSGC
Sbjct: 1003 LINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGC 1062

Query: 134  CKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASAS 188
              L  +P ++G + +L+ L++SG  + +  P+S   L  NL+ L  SGC+   E P+S  
Sbjct: 1063 SSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNL--NLKKLDLSGCSSLVELPSSIG 1120

Query: 189  WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
              ++L    L  S C   + LP S+  + +L +L LS+C      +PS I NL +L+ELY
Sbjct: 1121 NLINL--KKLDLSGCSSLVELPLSIGNLINLQELYLSECS-SLVELPSSIGNLINLQELY 1177

Query: 248  LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
            L+  ++ V LP+SI  L+NL++L+L  C +L SLPQ+P +L  + A  C SL TL  +  
Sbjct: 1178 LSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFP 1237

Query: 307  LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
               +    +  ID  KL  K        R+ +   + S+       + PG ++P +F Y+
Sbjct: 1238 ---NPQVWLKFIDCWKLNEKG-------RDIIVQTSTSN-----YTMLPGREVPAFFTYR 1282

Query: 367  -NEGSSITV 374
               G S+ V
Sbjct: 1283 ATTGGSLAV 1291



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 171/297 (57%), Gaps = 13/297 (4%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ ++PSSI  L  L  L L GC +L  LP +I +L  L  L+L GCS L + P  + +
Sbjct: 751  SSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGN 810

Query: 75   MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            + +L   Y  G +S+ E+PSSI  L  L++LYL    +LV +PSSI  L +LK LNLSGC
Sbjct: 811  LINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGC 870

Query: 134  CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASW 189
              L  +P ++G + +L++LD+SG +++     SI  + NL+ LY S C+   E P+S   
Sbjct: 871  SSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGN 930

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
             ++L    L  S C   + LPS  G + +L +L LS+C      +PS I NL +LK+L L
Sbjct: 931  LINL--KTLNLSECSSLVELPSSIGNLINLQELYLSECS-SLVELPSSIGNLINLKKLDL 987

Query: 249  NR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP---NLQFVRANGCSSLVTL 301
            +  ++ V LP SI  L+NL+ L L +C  L  LP       NLQ +  + CSSLV L
Sbjct: 988  SGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVEL 1044



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 161/323 (49%), Gaps = 34/323 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L+ D   +T +PS   L   L  + LK  + L  L   I  L  L+ ++L   S LK+ P
Sbjct: 653 LHWDYYPMTSLPSKFNL-KFLVKIILKHSE-LEKLWEGIQPLVNLKVMDLRYSSHLKELP 710

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +  ++  L  +  D +S+ E+PSSI     ++ L +  C +L++LPSSI  L +L  L+
Sbjct: 711 NLSTAINLLEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLD 770

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPA 185
           L GC  L  +P ++G + +L  LD+ G +++    SSI  + NL + YF GC+   E P+
Sbjct: 771 LMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPS 830

Query: 186 SASWHLHLPFNLLGK----------------------SSCPVALMLPSLTG-VCSLTKLD 222
           S    + L    L +                      S C   + LPS  G + +L KLD
Sbjct: 831 SIGNLISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLD 890

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           LS C      +P  I NL +L+ELYL+  ++ V LP+SI  L+NL+ L L +C  L  LP
Sbjct: 891 LSGCS-SLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELP 949

Query: 282 QIPP---NLQFVRANGCSSLVTL 301
                  NLQ +  + CSSLV L
Sbjct: 950 SSIGNLINLQELYLSECSSLVEL 972



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 13/170 (7%)

Query: 647  CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
            CS L E      +++ +    LS+ + + EL  +I  L  L +L L+GC +L  LP +I 
Sbjct: 942  CSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIG 1001

Query: 703  ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS---- 757
             L  L TLNLS  S   E P    +   L E++L E +++  LP+SI    GN+++    
Sbjct: 1002 NLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI----GNLINLKKL 1057

Query: 758  NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
            +L  C +L  LP +I  L +L+ +  SGCS L  +  ++G +   ++ LS
Sbjct: 1058 DLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLS 1107



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 13/166 (7%)

Query: 647  CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
            CS L E      +++ +    LS  + + EL L+I  L  L +L L+ C +L  LP +I 
Sbjct: 870  CSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIG 929

Query: 703  ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS---- 757
             L  L TLNLS  S   E P    +   L E++L E +++  LP+SI    GN+++    
Sbjct: 930  NLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI----GNLINLKKL 985

Query: 758  NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +L  C +L  LP +I  L +L+ +  S CS L  +  ++G + +L+
Sbjct: 986  DLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQ 1031



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 9/120 (7%)

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPAS 747
           +GC +L  LP +I  L  L  L+LSG S   E P    +   L E++L E +++  LP+S
Sbjct: 868 SGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSS 927

Query: 748 IELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           I    GN+++    NL +C +L  LPS+I  L +L+ +Y S CS L  +  ++G + +L+
Sbjct: 928 I----GNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLK 983



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 18/154 (11%)

Query: 681  FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGT 739
              L +L L+GC +L  LP +I  L  L  L+LSG S   E P    +   L E++L E +
Sbjct: 1099 LNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECS 1158

Query: 740  AIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE- 794
            ++  LP+SI    GN+++     L +C +L  LPS+I  L +L+ +  + C+KL ++ + 
Sbjct: 1159 SLVELPSSI----GNLINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQL 1214

Query: 795  -------TLGKVESLEVRLSSWNRPKMQNDF-DC 820
                        ESLE    S+  P++   F DC
Sbjct: 1215 PDSLSVLVAESCESLETLACSFPNPQVWLKFIDC 1248



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 17/165 (10%)

Query: 649 RLWEEADEFPDI-VQVLSDGTDIREL---SLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           +LWE      ++ V  L   + ++EL   S AI LL    ++ L+ C +L  LP +I   
Sbjct: 684 KLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLL----EMVLSDCSSLIELPSSIGNA 739

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS----NL 759
             + +L++ G S   + P    +   L  + L G +++  LP+SI    GN+++    +L
Sbjct: 740 TNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSI----GNLINLPRLDL 795

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             C +L  LPS+I  L +L   Y  GCS L  +  ++G + SL++
Sbjct: 796 MGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKI 840



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + + EL  +I  L  L +L L GC +L  LP +I  L  L      G S   E P    +
Sbjct: 775 SSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGN 834

Query: 728 RDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              L  ++L+  +++  +P+SI  L    L NL  C +L  LPS+I  L +L+ +  SGC
Sbjct: 835 LISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGC 894

Query: 787 SKLKNVTETLGKVESLE 803
           S L  +  ++G + +L+
Sbjct: 895 SSLVELPLSIGNLINLQ 911



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 664  LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            LS  + + EL  +I  L  L +L L+GC +L  LP +I  L  L  L LS  S   E P 
Sbjct: 1106 LSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPS 1165

Query: 724  ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSL 778
               +   L E++L E +++  LP+SI    GN+++    +L  C  L SLP   +   SL
Sbjct: 1166 SIGNLINLQELYLSECSSLVELPSSI----GNLINLKKLDLNKCTKLVSLPQLPD---SL 1218

Query: 779  RMMYPSGCSKLKNVT 793
             ++    C  L+ + 
Sbjct: 1219 SVLVAESCESLETLA 1233


>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
          Length = 1398

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 209/369 (56%), Gaps = 29/369 (7%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ E+PSSI  L  L+ L L  C +L  LP +I +L  L+ L+LSGCS L + P  + +
Sbjct: 941  SSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGN 1000

Query: 75   MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            + +L  L L + +S+ E+PSSI  L  L+ LYL+EC +LV LPSSI  L +LK L+LSGC
Sbjct: 1001 LINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGC 1060

Query: 134  CKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASAS 188
              L  +P ++G + +L+ L++SG  + +  P+S   L  NL+ L  SGC+   E P+S  
Sbjct: 1061 SSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNL--NLKKLDLSGCSSLVELPSSIG 1118

Query: 189  WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
              ++L    L  S C   + LP S+  + +L +L LS+C      +PS I NL +L+ELY
Sbjct: 1119 NLINL--KKLDLSGCSSLVELPLSIGNLINLQELYLSECS-SLVELPSSIGNLINLQELY 1175

Query: 248  LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
            L+  ++ V LP+SI  L+NL++L+L  C +L SLPQ+P +L  + A  C SL TL  +  
Sbjct: 1176 LSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFP 1235

Query: 307  LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
               +    +  ID  KL  K        R+ +   + S+       + PG ++P +F Y+
Sbjct: 1236 ---NPQVWLKFIDCWKLNEKG-------RDIIVQTSTSN-----YTMLPGREVPAFFTYR 1280

Query: 367  -NEGSSITV 374
               G S+ V
Sbjct: 1281 ATTGGSLAV 1289



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 171/297 (57%), Gaps = 13/297 (4%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ ++PSSI  L  L  L L GC +L  LP +I +L  L  L+L GCS L + P  + +
Sbjct: 749  SSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGN 808

Query: 75   MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            + +L   Y  G +S+ E+PSSI  L  L++LYL    +LV +PSSI  L +LK LNLSGC
Sbjct: 809  LINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGC 868

Query: 134  CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASW 189
              L  +P ++G + +L++LD+SG +++     SI  + NL+ LY S C+   E P+S   
Sbjct: 869  SSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGN 928

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
             ++L    L  S C   + LPS  G + +L +L LS+C      +PS I NL +LK+L L
Sbjct: 929  LINL--KTLNLSECSSLVELPSSIGNLINLQELYLSECS-SLVELPSSIGNLINLKKLDL 985

Query: 249  NR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP---NLQFVRANGCSSLVTL 301
            +  ++ V LP SI  L+NL+ L L +C  L  LP       NLQ +  + CSSLV L
Sbjct: 986  SGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVEL 1042



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 161/323 (49%), Gaps = 34/323 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L+ D   +T +PS   L   L  + LK  + L  L   I  L  L+ ++L   S LK+ P
Sbjct: 651 LHWDYYPMTSLPSKFNL-KFLVKIILKHSE-LEKLWEGIQPLVNLKVMDLRYSSHLKELP 708

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +  ++  L  +  D +S+ E+PSSI     ++ L +  C +L++LPSSI  L +L  L+
Sbjct: 709 NLSTAINLLEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLD 768

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPA 185
           L GC  L  +P ++G + +L  LD+ G +++    SSI  + NL + YF GC+   E P+
Sbjct: 769 LMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPS 828

Query: 186 SASWHLHLPFNLLGK----------------------SSCPVALMLPSLTG-VCSLTKLD 222
           S    + L    L +                      S C   + LPS  G + +L KLD
Sbjct: 829 SIGNLISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLD 888

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           LS C      +P  I NL +L+ELYL+  ++ V LP+SI  L+NL+ L L +C  L  LP
Sbjct: 889 LSGCS-SLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELP 947

Query: 282 QIPP---NLQFVRANGCSSLVTL 301
                  NLQ +  + CSSLV L
Sbjct: 948 SSIGNLINLQELYLSECSSLVEL 970



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 13/170 (7%)

Query: 647  CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
            CS L E      +++ +    LS+ + + EL  +I  L  L +L L+GC +L  LP +I 
Sbjct: 940  CSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIG 999

Query: 703  ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS---- 757
             L  L TLNLS  S   E P    +   L E++L E +++  LP+SI    GN+++    
Sbjct: 1000 NLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI----GNLINLKKL 1055

Query: 758  NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
            +L  C +L  LP +I  L +L+ +  SGCS L  +  ++G +   ++ LS
Sbjct: 1056 DLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLS 1105



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 13/166 (7%)

Query: 647  CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
            CS L E      +++ +    LS  + + EL L+I  L  L +L L+ C +L  LP +I 
Sbjct: 868  CSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIG 927

Query: 703  ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS---- 757
             L  L TLNLS  S   E P    +   L E++L E +++  LP+SI    GN+++    
Sbjct: 928  NLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI----GNLINLKKL 983

Query: 758  NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +L  C +L  LP +I  L +L+ +  S CS L  +  ++G + +L+
Sbjct: 984  DLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQ 1029



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 9/120 (7%)

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPAS 747
           +GC +L  LP +I  L  L  L+LSG S   E P    +   L E++L E +++  LP+S
Sbjct: 866 SGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSS 925

Query: 748 IELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           I    GN+++    NL +C +L  LPS+I  L +L+ +Y S CS L  +  ++G + +L+
Sbjct: 926 I----GNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLK 981



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 18/154 (11%)

Query: 681  FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGT 739
              L +L L+GC +L  LP +I  L  L  L+LSG S   E P    +   L E++L E +
Sbjct: 1097 LNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECS 1156

Query: 740  AIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE- 794
            ++  LP+SI    GN+++     L +C +L  LPS+I  L +L+ +  + C+KL ++ + 
Sbjct: 1157 SLVELPSSI----GNLINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQL 1212

Query: 795  -------TLGKVESLEVRLSSWNRPKMQNDF-DC 820
                        ESLE    S+  P++   F DC
Sbjct: 1213 PDSLSVLVAESCESLETLACSFPNPQVWLKFIDC 1246



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 17/165 (10%)

Query: 649 RLWEEADEFPDI-VQVLSDGTDIREL---SLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           +LWE      ++ V  L   + ++EL   S AI LL    ++ L+ C +L  LP +I   
Sbjct: 682 KLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLL----EMVLSDCSSLIELPSSIGNA 737

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS----NL 759
             + +L++ G S   + P    +   L  + L G +++  LP+SI    GN+++    +L
Sbjct: 738 TNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSI----GNLINLPRLDL 793

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             C +L  LPS+I  L +L   Y  GCS L  +  ++G + SL++
Sbjct: 794 MGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKI 838



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + + EL  +I  L  L +L L GC +L  LP +I  L  L      G S   E P    +
Sbjct: 773 SSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGN 832

Query: 728 RDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              L  ++L+  +++  +P+SI  L    L NL  C +L  LPS+I  L +L+ +  SGC
Sbjct: 833 LISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGC 892

Query: 787 SKLKNVTETLGKVESLE 803
           S L  +  ++G + +L+
Sbjct: 893 SSLVELPLSIGNLINLQ 909



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 664  LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            LS  + + EL  +I  L  L +L L+GC +L  LP +I  L  L  L LS  S   E P 
Sbjct: 1104 LSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPS 1163

Query: 724  ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSL 778
               +   L E++L E +++  LP+SI    GN+++    +L  C  L SLP   +   SL
Sbjct: 1164 SIGNLINLQELYLSECSSLVELPSSI----GNLINLKKLDLNKCTKLVSLPQLPD---SL 1216

Query: 779  RMMYPSGCSKLKNVT 793
             ++    C  L+ + 
Sbjct: 1217 SVLVAESCESLETLA 1231


>gi|297741023|emb|CBI31335.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/303 (39%), Positives = 168/303 (55%), Gaps = 19/303 (6%)

Query: 6   DLSDLYLDGTSITEVPS--SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           DL  LY  G S+  +P   S + L  L +       ++  L   I  LK L++++LS   
Sbjct: 602 DLRYLYWHGYSLKSLPKDFSPKHLVDLSM----PYSHIKKLWKGIKVLKSLKSMDLSHSK 657

Query: 64  KLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            L + P   + + +L +L L+G  ++ EV  S+  L  L  L L +CK L RLPS I   
Sbjct: 658 CLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNF 716

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           KSL+TL LSGC K E  P+  G +E L+EL   GT +R    S F M+NL+ L F GC  
Sbjct: 717 KSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCG- 775

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            PASASW          +SS  +   +PS + +C L KLDLSDC + + A    +  L S
Sbjct: 776 -PASASWLWS------KRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSS 828

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ--FVRANGCSSLVT 300
           L++L L+ NNFVTLP ++SGL +L  L LE+CKRLQ+LPQ P +L+   +R N   +L  
Sbjct: 829 LEDLNLSGNNFVTLP-NMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILRGNNFVTLPN 887

Query: 301 LFG 303
           + G
Sbjct: 888 MSG 890



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+L  CK L RLP  I   K L TL LSG SKF EFPE   + + L E+H +GT +R LP
Sbjct: 698 LSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALP 757

Query: 746 AS 747
            S
Sbjct: 758 PS 759



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 4/113 (3%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG--TAIRGLPASIEL 750
           ++++L + I  LK L +++LS      E P+  S    L  + LEG        P+  +L
Sbjct: 634 HIKKLWKGIKVLKSLKSMDLSHSKCLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDL 692

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              N LS LKDCK L+ LPS I   +SLR +  SGCSK +   E  G +E L+
Sbjct: 693 KKLNFLS-LKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLK 744



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 32/204 (15%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLT- 687
           ++ G + VR++ P+EPG  SRLWE+ D F D+++       I  + L +  L  ++  T 
Sbjct: 494 QQMGWEIVRQECPKEPGRRSRLWEQEDIF-DVLKRNMGSEKIEGIFLDLSHLEDILDFTT 552

Query: 688 --LNGCKNLERLPRTISALKYLS------TLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
               G K L RL +  ++   L       T N     + R   E     D L  ++  G 
Sbjct: 553 EAFAGMKKL-RLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGY 611

Query: 740 AIRGLP--------ASIELLSGNILSNLKDCKNLKSLPST-------------INGLRSL 778
           +++ LP          + +   +I    K  K LKSL S               +G+ +L
Sbjct: 612 SLKSLPKDFSPKHLVDLSMPYSHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNL 671

Query: 779 RMMYPSGCSKLKNVTETLGKVESL 802
             +   GC  L  V  +LG ++ L
Sbjct: 672 ERLVLEGCINLPEVHPSLGDLKKL 695


>gi|240256011|ref|NP_193686.5| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658792|gb|AEE84192.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 211/413 (51%), Gaps = 40/413 (9%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++  K+L  L L+G +  ++  S++ +  L  L L+ C +L SLP     +K L+TL LS
Sbjct: 653  LSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILS 711

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            GC KLK F  I  S+E    L+L+GT+I  V   IE L  L LL L  C+ L  LP+ + 
Sbjct: 712  GCLKLKDFHIISESIE---SLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLY 768

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             LKSL+ L LSGC  LE++P    K+E LE L + GT+I++ T  +  + NL+   F  C
Sbjct: 769  KLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQ-TPEMSCLSNLKICSF--C 825

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  ++  + LPF                 +G   L+ L L++C + +  +P    +L
Sbjct: 826  RPVIDDSTGLVVLPF-----------------SGNSFLSDLYLTNCNIDK--LPDKFSSL 866

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
             SL+ L L+RNN  TLP SI  L +L  L+L+ C RL+SLP +P NLQ++ A+GC SL  
Sbjct: 867  RSLRCLCLSRNNIETLPESIEKLYSLLLLDLKHCCRLKSLPLLPSNLQYLDAHGCGSLEN 926

Query: 301  LFGALKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK----- 349
            +   L +        + +   +C    +  +++ +A + L+  L  +      HK     
Sbjct: 927  VSKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHNHKGLLLD 986

Query: 350  --LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
              +++ FPG  IP WF +Q  GS I      +  N +K +G ++C V     H
Sbjct: 987  PLVAVCFPGHDIPSWFSHQKMGSLIETDLLPHWCN-SKFIGASLCVVVTFKDH 1038



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 4/139 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L  C +LE LP+    +K L TL LSG  K ++F  I+ S + L   HLEGTAI 
Sbjct: 682 LIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIESL---HLEGTAIE 737

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +   IE L   IL NLK+C+ LK LP+ +  L+SL+ +  SGCS L+++     K+E L
Sbjct: 738 RVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECL 797

Query: 803 EVRLSSWNRPKMQNDFDCV 821
           E+ L      K   +  C+
Sbjct: 798 EILLMDGTSIKQTPEMSCL 816



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 26/175 (14%)

Query: 647 CSRLWEEADEFPDIV----------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER 696
           CS++    D FPD +            L    D +EL + + L +  ++      KN E 
Sbjct: 580 CSKV---PDHFPDELVYLHWQGYPYDCLPSDFDPKEL-VDLSLRYSHIKQLWEDEKNTES 635

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           L R +   +    LNLSGLS+ +           L  + LEG     L  S++ ++  I 
Sbjct: 636 L-RWVDLGQSKDLLNLSGLSRAK----------NLERLDLEGCTSLDLLGSVKQMNELIY 684

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
            NL+DC +L+SLP     ++SL+ +  SGC KLK+       +ESL +  ++  R
Sbjct: 685 LNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIESLHLEGTAIER 738


>gi|224060457|ref|XP_002300209.1| predicted protein [Populus trichocarpa]
 gi|222847467|gb|EEE85014.1| predicted protein [Populus trichocarpa]
          Length = 614

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 239/508 (47%), Gaps = 88/508 (17%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++ +L  L L+G TS+ ++ +SI  L  L  L+L+ C NL SL  ++     L+TL L
Sbjct: 4   FSTILNLERLNLEGCTSLVKIHNSIGCLDKLVFLSLEFCSNLKSLSSSLRLRS-LQTLLL 62

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           +GCSKL+KFP I   M  + ++ L+ T+I E+PSSIE L GL++L L+ C+NL  +PSSI
Sbjct: 63  TGCSKLEKFPNIEDRMTSVERVCLNETAIEELPSSIENLVGLQVLTLSFCRNLSSIPSSI 122

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L+ LK L L GC  L+N P+ +G               R+P   IF M +L+  Y   
Sbjct: 123 YMLQHLKHLLLEGCSNLKNFPENVGNE-------------RQP---IFSMVSLKLNY--- 163

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                  + W                    P LT       LDL +C L E     + D 
Sbjct: 164 ------GSKW-------------------FPRLTC------LDLKNCNLLEVDFLMNPDC 192

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC---- 295
              LK+L L+ N+F  LP SI     L  L+L +CK L+ +PQ+PP+++ + A  C    
Sbjct: 193 FSMLKDLDLSGNSFFRLPTSICSFKKLRRLKLVNCKWLREIPQLPPSIKCIGARDCISLE 252

Query: 296 --SSLVTLFGALKLCRSK----YTIINCI----DSLKLLRKNGLAISMLREYLE-LQAVS 344
             S L  +F   K  R K        NC     + L  L    LA + L E  + L A S
Sbjct: 253 RFSQLTRVFKISKAERLKRLHDLDFSNCHKLAENPLSSLTSIALANTSLDEDGDVLDANS 312

Query: 345 D---PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS 401
           D      ++ +  PGS+IP W  Y ++ S ++   PS++Y   +++   +C +  +    
Sbjct: 313 DGFCENFRIEVFLPGSEIPDWMSYYSDESYLSFLVPSHMY--GEIIAVVLCTILSLEDDV 370

Query: 402 TGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLP---RHGHN-WQFE 457
           T             E  ++G      I F  +F  + SDH+WL +LP     G N  Q +
Sbjct: 371 TANI--------SREVFINGQ---IVISFSRQFFSLESDHMWLYYLPCRMIQGFNSLQND 419

Query: 458 SNLIRLSFRSISDP-TWKVKRCGFHPIY 484
            +   +SFR +  P    +K CG H +Y
Sbjct: 420 WSRFEVSFRILGAPMNATLKGCGVHLVY 447



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 23/141 (16%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYL-----------------------STLNLSGLS 716
           +  L +L L GC +L ++  +I  L  L                        TL L+G S
Sbjct: 7   ILNLERLNLEGCTSLVKIHNSIGCLDKLVFLSLEFCSNLKSLSSSLRLRSLQTLLLTGCS 66

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FP I      +  + L  TAI  LP+SIE L G  +  L  C+NL S+PS+I  L+
Sbjct: 67  KLEKFPNIEDRMTSVERVCLNETAIEELPSSIENLVGLQVLTLSFCRNLSSIPSSIYMLQ 126

Query: 777 SLRMMYPSGCSKLKNVTETLG 797
            L+ +   GCS LKN  E +G
Sbjct: 127 HLKHLLLEGCSNLKNFPENVG 147



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 36/208 (17%)

Query: 655 DEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           D    + +V  + T I EL  +IE L GL  LTL+ C+NL  +P +I  L++L  L L G
Sbjct: 76  DRMTSVERVCLNETAIEELPSSIENLVGLQVLTLSFCRNLSSIPSSIYMLQHLKHLLLEG 135

Query: 715 LSKFREFPEITSSRDQ----LLEIHLE-GTAIRGLPASIELLSGNIL-----------SN 758
            S  + FPE   +  Q    ++ + L  G+        ++L + N+L           S 
Sbjct: 136 CSNLKNFPENVGNERQPIFSMVSLKLNYGSKWFPRLTCLDLKNCNLLEVDFLMNPDCFSM 195

Query: 759 LKDC----KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKM 814
           LKD      +   LP++I   + LR +    C  L+ + +    ++ +  R         
Sbjct: 196 LKDLDLSGNSFFRLPTSICSFKKLRRLKLVNCKWLREIPQLPPSIKCIGAR--------- 246

Query: 815 QNDFDCV---EQSAVETVTKLAKAELLR 839
               DC+     S +  V K++KAE L+
Sbjct: 247 ----DCISLERFSQLTRVFKISKAERLK 270


>gi|359493394|ref|XP_002279512.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 242/563 (42%), Gaps = 102/563 (18%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR----- 55
              +M  L +L L  + I E+P SI  L  LE L L  C N    P    ++KCL+     
Sbjct: 786  FTNMGRLRELCLYRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLD 845

Query: 56   ------------------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                              +L LSGCS L++FP+I  +M +L  L+LD T+I  +P S+  
Sbjct: 846  NTAIKKLPNSIGRLQALGSLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGH 905

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            L  L+ L L  CKNL  LP+SI  LKSL+ L+L+GC  L+   +    +E LE L +  T
Sbjct: 906  LTRLDRLNLENCKNLKSLPNSICELKSLEGLSLNGCSNLKAFSEITEDMEQLERLFLCET 965

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML---PSLTG 214
             I    SSI  ++ L+SL    C    A       LP N +G  +C  +L +   P L  
Sbjct: 966  GISELPSSIEHLRGLKSLELINCENLVA-------LP-NSIGNLTCLTSLHVRNCPKLHN 1017

Query: 215  V--------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            +        C LT LDL  C L E  IPSD+  L  L  L ++ +    +PA I+ L  L
Sbjct: 1018 LPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISESRMRCIPAGITQLCKL 1077

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
              L +  C  L+ + ++P +L ++ A+GC SL T                          
Sbjct: 1078 RILLMNHCPMLEVIGELPSSLGWIEAHGCPSLET-------------------------- 1111

Query: 327  NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
               + S+L   L     S    + +I+ PGS  IP+W  +Q  G  ++V  P   Y  N 
Sbjct: 1112 -ETSSSLLWSSLLKHLKSPIQQQFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNN 1170

Query: 386  VVGFAICCVFQVPKHSTGTYLFHSYPAH-ELECSM-DGSGEGHYIYFRGK---------- 433
            ++GF +     VP           +  H +LE S  D S     I F             
Sbjct: 1171 LLGFVL-FFHHVPLDDDECVRTSGFIPHCKLEISHGDQSKRLDNIGFHPHCKTYWISGLS 1229

Query: 434  FGHVVSDH-------LWLLFLPRHG-------HNW-----QFESNLIRLSFRSISDPTWK 474
            +G    D        LW+ + P+ G         W      F++ +   SF    + ++K
Sbjct: 1230 YGSTCYDSGSTSDPALWVTYFPQIGIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFK 1289

Query: 475  VKRCGFHPIYMHEVEEFDETTKQ 497
            VK CG H IY  + +++ + +++
Sbjct: 1290 VKSCGIHLIYAQDQKQWPQPSRK 1312



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 6/294 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G TS+ E+ SSI  L  L  L L GC+ L S P ++   + L  L L
Sbjct: 550 FSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLGGCEQLRSFPSSMK-FESLEVLYL 608

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C  LKKFP+I  +ME L +LYL+ + I E+PSSI  L  LE+L L++C N  + P   
Sbjct: 609 NCCPNLKKFPKIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIH 668

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             +K L+ L L GC K EN PDT   +  L  L +  + I+   SSI  +++L  L  S 
Sbjct: 669 GNMKFLRELYLEGCSKFENFPDTFTYMGHLRGLHLRKSGIKELPSSIGYLESLEILDISC 728

Query: 180 CN--EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           C+  E       ++    NL  + +  +  +  S+  + SL  L L  C L         
Sbjct: 729 CSKFEKFPEIQGNMKCLKNLYLRKT-AIQELPNSIGSLTSLEILSLEKC-LKFEKFSDVF 786

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            N+  L+EL L R+    LP SI  L +LE L L  C   +  P+I  N++ ++
Sbjct: 787 TNMGRLRELCLYRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLK 840



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 38/219 (17%)

Query: 623 GCMSCYKK-WGRQTVRRQSPQEPGNCSRL----WEEADEFPDIVQVLSDGTDIRELSL-- 675
           G M C K  + R+T  ++ P   G+ + L     E+  +F     V ++   +REL L  
Sbjct: 740 GNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLYR 799

Query: 676 --------AIELLFGLVQLTLNGCKNLER-----------------------LPRTISAL 704
                   +I  L  L  L L+ C N E+                       LP +I  L
Sbjct: 800 SGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIKKLPNSIGRL 859

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           + L +L LSG S    FPEI  +   L  + L+ TAI GLP S+  L+     NL++CKN
Sbjct: 860 QALGSLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDRLNLENCKN 919

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LKSLP++I  L+SL  +  +GCS LK  +E    +E LE
Sbjct: 920 LKSLPNSICELKSLEGLSLNGCSNLKAFSEITEDMEQLE 958



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 11/157 (7%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS L    + FP+I + +        D T I  L  ++  L  L +L L  CKNL+ LP 
Sbjct: 870  CSNL----ERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDRLNLENCKNLKSLPN 925

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  LK L  L+L+G S  + F EIT   +QL  + L  T I  LP+SIE L G     L
Sbjct: 926  SICELKSLEGLSLNGCSNLKAFSEITEDMEQLERLFLCETGISELPSSIEHLRGLKSLEL 985

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             +C+NL +LP++I  L  L  ++   C KL N+ + L
Sbjct: 986  INCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNL 1022



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 37/215 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------IE 678
           ++ G   VR +SP +P   SRLW+  D+  D         +++ + L+            
Sbjct: 493 QEMGWAIVREESPGDPCKWSRLWD-VDDIHDAFSKQERFEELKGIDLSNSKQLVKMPKFS 551

Query: 679 LLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR------------------- 719
            +  L +L L GC +L  L  +I  LK L+ LNL G  + R                   
Sbjct: 552 SMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLGGCEQLRSFPSSMKFESLEVLYLNCC 611

Query: 720 ----EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
               +FP+I  + + L E++L  + I+ LP+SI  L+   + NL DC N +  P     +
Sbjct: 612 PNLKKFPKIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNM 671

Query: 776 RSLRMMYPSGCSKLKNVTET---LGKVESLEVRLS 807
           + LR +Y  GCSK +N  +T   +G +  L +R S
Sbjct: 672 KFLRELYLEGCSKFENFPDTFTYMGHLRGLHLRKS 706



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + I+EL  +I  L  L  L L+ C N E+ P     +K+L  L L G SKF  FP+  + 
Sbjct: 635 SGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLEGCSKFENFPDTFTY 694

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L  +HL  + I+ LP+SI  L    + ++  C   +  P     ++ L+ +Y    +
Sbjct: 695 MGHLRGLHLRKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRK-T 753

Query: 788 KLKNVTETLGKVESLEV 804
            ++ +  ++G + SLE+
Sbjct: 754 AIQELPNSIGSLTSLEI 770



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 10/144 (6%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L++S  SKF +FPEI  +   L  ++L  TAI+ LP SI  L+ 
Sbjct: 708 IKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTS 767

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLR--MMYPSGCSKLKNVTETLGKVESLE-VRLSSWN 810
             + +L+ C   +        +  LR   +Y SG   +K +  ++G +ESLE + LS  +
Sbjct: 768 LEILSLEKCLKFEKFSDVFTNMGRLRELCLYRSG---IKELPGSIGYLESLENLNLSYCS 824

Query: 811 R----PKMQNDFDCVEQSAVETVT 830
                P++Q +  C+++ +++   
Sbjct: 825 NFEKFPEIQGNMKCLKELSLDNTA 848



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 7/140 (5%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITS 726
            T I EL  +IE L GL  L L  C+NL  LP +I  L  L++L++    K    P+ + S
Sbjct: 965  TGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRS 1024

Query: 727  SRDQLLEIHLEGTAI--RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
             +  L  + L G  +    +P+ +  LS  +  N+ + + ++ +P+ I  L  LR++  +
Sbjct: 1025 LQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISESR-MRCIPAGITQLCKLRILLMN 1083

Query: 785  GCSKLKNVTE---TLGKVES 801
             C  L+ + E   +LG +E+
Sbjct: 1084 HCPMLEVIGELPSSLGWIEA 1103


>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1295

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 168/563 (29%), Positives = 248/563 (44%), Gaps = 108/563 (19%)

Query: 10   LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
            LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 722  LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 781

Query: 46   VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
             T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 782  DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 838

Query: 106  LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
            ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 839  ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 898

Query: 142  TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
             +G + +LE L  S T IRR   SI  +  L+ L        P             L  S
Sbjct: 899  NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEG-----------LLHS 947

Query: 202  SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
             C      P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 948  LC------PPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 999

Query: 262  GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
             L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 1000 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNC-- 1057

Query: 320  SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                 + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 1058 ----YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 1109

Query: 380  LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH-------ELECSMDGSGEGHY----I 428
              + + ++GF+ C +  V     G Y  ++   H          C +    E  Y     
Sbjct: 1110 -ESSSDILGFSACIMIGV----DGQYPMNNLKIHCSCILKDADACELVVMDEVWYPDPKA 1164

Query: 429  YFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSIS----DPTWKVKRCGFHPIY 484
            +    FG   SDHL LLF         +   L   S  +       P  +VK+C  H I 
Sbjct: 1165 FTNMYFG---SDHL-LLFSRTCTSMEAYSEALFEFSVENTEGDSFSPLGEVKKCAVHLIS 1220

Query: 485  MHEVEEFDETTKQSTRFTSCNLN 507
            + ++    E +  S +  S +L+
Sbjct: 1221 LKDM--MQEFSNDSDKIQSSDLD 1241



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I  LK L T+ +SGCS LK FP+I  + 
Sbjct: 661 SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGII-LKSLETVGMSGCSSLKHFPEISWNT 719

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 720 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 776

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 777 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 809

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 810 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 846

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 847 SLPVSISELRSLEKLKLSGCSVLESFP 873



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 27/195 (13%)

Query: 624 CMS---CYKKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA--- 676
           CMS     K W G Q +R     +   C  L E  D        LS  T++ EL+L+   
Sbjct: 609 CMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQ 660

Query: 677 --------IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
                   I+ L GL    L  C  L+ +P  I  LK L T+ +SG S  + FPEI+ + 
Sbjct: 661 SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-ILKSLETVGMSGCSSLKHFPEISWNT 719

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            +L   +L  T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +
Sbjct: 720 RRL---YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 776

Query: 789 LKNVTETLGKVESLE 803
           L+N+ +TL  + SLE
Sbjct: 777 LENLPDTLQNLTSLE 791



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 747 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 806

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 807 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 863

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 864 SGCSVLES 871



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 128/298 (42%), Gaps = 64/298 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 581 RKLRYLRWDGYPLKTMPSRFFPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 636

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 637 KYLVEVP-------DLSKA-----------------TNLEELNLSYCQSLVEVTPSIKNL 672

Query: 123 KSLKTLNLSGCCKLENVPDTLGKV-ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           K L    L+ C +L+++P  +G + +SLE + +SG +  +    I    N R LY S   
Sbjct: 673 KGLSCFYLTNCIQLKDIP--IGIILKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTK 728

Query: 182 --EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             E P+S S           + SC              L KLD+SDC      +PS + +
Sbjct: 729 IEELPSSIS-----------RLSC--------------LVKLDMSDCQRLR-TLPSYLGH 762

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           L SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R +  S
Sbjct: 763 LVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETS 820



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 952  LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 1010

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 1011 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 1045

Query: 121  GLKSLKTLNLSGCCKLENVPDTL 143
                L+ L  S C KL+     L
Sbjct: 1046 QY-CLRKLVASNCYKLDQAAQIL 1067



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 801 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 860

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 861 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 905


>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1294

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 168/563 (29%), Positives = 248/563 (44%), Gaps = 108/563 (19%)

Query: 10   LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
            LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 721  LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 780

Query: 46   VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
             T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 781  DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 837

Query: 106  LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
            ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 838  ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 897

Query: 142  TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
             +G + +LE L  S T IRR   SI  +  L+ L        P             L  S
Sbjct: 898  NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEG-----------LLHS 946

Query: 202  SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
             C      P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 947  LC------PPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 998

Query: 262  GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
             L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 999  RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNC-- 1056

Query: 320  SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                 + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 1057 ----YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 1108

Query: 380  LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH-------ELECSMDGSGEGHY----I 428
              + + ++GF+ C +  V     G Y  ++   H          C +    E  Y     
Sbjct: 1109 -ESSSDILGFSACIMIGV----DGQYPMNNLKIHCSCILKDADACELVVMDEVWYPDPKA 1163

Query: 429  YFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSIS----DPTWKVKRCGFHPIY 484
            +    FG   SDHL LLF         +   L   S  +       P  +VK+C  H I 
Sbjct: 1164 FTNMYFG---SDHL-LLFSRTCTSMEAYSEALFEFSVENTEGDSFSPLGEVKKCAVHLIS 1219

Query: 485  MHEVEEFDETTKQSTRFTSCNLN 507
            + ++    E +  S +  S +L+
Sbjct: 1220 LKDM--MQEFSNDSDKIQSSDLD 1240



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I  LK L T+ +SGCS LK FP+I  + 
Sbjct: 660 SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGII-LKSLETVGMSGCSSLKHFPEISWNT 718

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 719 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 775

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 776 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 808

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 809 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 845

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 846 SLPVSISELRSLEKLKLSGCSVLESFP 872



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 27/195 (13%)

Query: 624 CMS---CYKKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA--- 676
           CMS     K W G Q +R     +   C  L E  D        LS  T++ EL+L+   
Sbjct: 608 CMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQ 659

Query: 677 --------IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
                   I+ L GL    L  C  L+ +P  I  LK L T+ +SG S  + FPEI+ + 
Sbjct: 660 SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGI-ILKSLETVGMSGCSSLKHFPEISWNT 718

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            +L   +L  T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +
Sbjct: 719 RRL---YLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 775

Query: 789 LKNVTETLGKVESLE 803
           L+N+ +TL  + SLE
Sbjct: 776 LENLPDTLQNLTSLE 790



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 746 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 805

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 806 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 862

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 863 SGCSVLES 870



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 128/298 (42%), Gaps = 64/298 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 580 RKLRYLRWDGYPLKTMPSRFFPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 635

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 636 KYLVEVP-------DLSKA-----------------TNLEELNLSYCQSLVEVTPSIKNL 671

Query: 123 KSLKTLNLSGCCKLENVPDTLGKV-ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           K L    L+ C +L+++P  +G + +SLE + +SG +  +    I    N R LY S   
Sbjct: 672 KGLSCFYLTNCIQLKDIP--IGIILKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTK 727

Query: 182 --EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             E P+S S           + SC              L KLD+SDC      +PS + +
Sbjct: 728 IEELPSSIS-----------RLSC--------------LVKLDMSDCQRLR-TLPSYLGH 761

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           L SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R +  S
Sbjct: 762 LVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETS 819



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 951  LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 1009

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 1010 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 1044

Query: 121  GLKSLKTLNLSGCCKLENVPDTL 143
                L+ L  S C KL+     L
Sbjct: 1045 QY-CLRKLVASNCYKLDQAAQIL 1066



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 800 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 859

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 860 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 904


>gi|359496028|ref|XP_003635135.1| PREDICTED: putative disease resistance protein At4g11170-like [Vitis
            vinifera]
 gi|296090593|emb|CBI40962.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 257/549 (46%), Gaps = 72/549 (13%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L  L LDG T + ++  S+  L  L LL+L+ C NL   P  I  L  L+TL L
Sbjct: 648  FSRVTNLECLILDGCTQLCKIHLSLGTLDKLTLLSLENCINLKHFP-GICQLVSLKTLIL 706

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGC KL+KFP I   M  LSKLYLDGT+I E+PSSI     L LL L  C+ L  LPSSI
Sbjct: 707  SGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSIAYATELVLLDLKNCRKLWSLPSSI 766

Query: 120  NGLKSLKTLNLSGC-----CK-----LENVPDTLGKVESLEELDVSGTAIRR-----PTS 164
              L  LKTL+LSGC     C+     L+ +P TL K+ +L  L++      R     P+S
Sbjct: 767  CQLTLLKTLSLSGCSDLGKCEVNSGNLDALPRTLDKLCNLWRLELQNCRSLRALPALPSS 826

Query: 165  -SIFLMKN---------------LRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVAL 207
             +I   +N               +++L  SGC +         H+P  + L      +  
Sbjct: 827  LAIINARNCESLEDAGAFSQLVSVKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITE 886

Query: 208  MLPSLTGVCSLTKLDLSDCGLGEAAIPSDI-----------DNLHSLKELYLNRNNFVTL 256
            +  S++    L  LDL +C     ++PS I                L +  +N  N   L
Sbjct: 887  LPSSISYATELVLLDLKNCR-KLWSLPSSICQLTLLETLSLSGCSDLGKCEVNSGNLDAL 945

Query: 257  PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL-----VTLFGALKLCRSK 311
            P ++  L NL  LEL++CK L++LP +P +L+F+ A+ C SL      ++F  L+  RS 
Sbjct: 946  PRTLDQLRNLWRLELQNCKSLRALPVLPSSLEFINASNCESLEDISPQSVFSQLR--RSM 1003

Query: 312  YTIINCIDSLKLLRKNGLAISMLREYLE-------LQAVSDPGHKL-SIVFPGSQIPKWF 363
            +   NC    K   +    +  +  +++        +  S   H L S VFPGS IP WF
Sbjct: 1004 FG--NCFKLTKFQSRMERDLQSMAAHVDQKKWRSTFEEQSPVVHVLFSTVFPGSGIPDWF 1061

Query: 364  MYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH--STGTYLFHSYPAHELECSMDG 421
             +++EG  I +      Y+ +  +GFA   V    K   ++G   +           +  
Sbjct: 1062 AHRSEGHEINIQVSQNWYS-SYFLGFAFSAVVAPEKEPLTSGWITYCDLRCGAFNSELKS 1120

Query: 422  SGEGHYIY---FRGKFGH--VVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVK 476
            +G   + +   +  +  H  + SDH+WL ++P        + + I+ SFR+  +    VK
Sbjct: 1121 NGIFSFSFVDDWTEQLEHITIASDHMWLAYVPSFLGFSPEKWSCIKFSFRTDKESC-IVK 1179

Query: 477  RCGFHPIYM 485
            RCG  P+Y+
Sbjct: 1180 RCGVCPVYI 1188



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L   T + ++ L++  L  L  L+L  C NL+  P  I  L  L TL LSG  K  +FP
Sbjct: 658 ILDGCTQLCKIHLSLGTLDKLTLLSLENCINLKHFP-GICQLVSLKTLILSGCPKLEKFP 716

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +I      L +++L+GTAI  LP+SI   +  +L +LK+C+ L SLPS+I  L  L+ + 
Sbjct: 717 DIAQHMPCLSKLYLDGTAITELPSSIAYATELVLLDLKNCRKLWSLPSSICQLTLLKTLS 776

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGCS L       G +++L
Sbjct: 777 LSGCSDLGKCEVNSGNLDAL 796



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 20/154 (12%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS-------------------- 708
           ++  L   ++ L  L +L L  C++L  LP   S+L  ++                    
Sbjct: 792 NLDALPRTLDKLCNLWRLELQNCRSLRALPALPSSLAIINARNCESLEDAGAFSQLVSVK 851

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
           TL LSG  K  +FP+I      L +++L+GTAI  LP+SI   +  +L +LK+C+ L SL
Sbjct: 852 TLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSISYATELVLLDLKNCRKLWSL 911

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           PS+I  L  L  +  SGCS L       G +++L
Sbjct: 912 PSSICQLTLLETLSLSGCSDLGKCEVNSGNLDAL 945



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 8/139 (5%)

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL----PFNLLGKSS 202
           ESL+ +D+S +     T     + NL  L   GC +       HL L       LL   +
Sbjct: 629 ESLKYMDLSDSKYLTETPDFSRVTNLECLILDGCTQ---LCKIHLSLGTLDKLTLLSLEN 685

Query: 203 CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
           C      P +  + SL  L LS C   E   P    ++  L +LYL+      LP+SI+ 
Sbjct: 686 CINLKHFPGICQLVSLKTLILSGCPKLE-KFPDIAQHMPCLSKLYLDGTAITELPSSIAY 744

Query: 263 LLNLEELELEDCKRLQSLP 281
              L  L+L++C++L SLP
Sbjct: 745 ATELVLLDLKNCRKLWSLP 763



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 23/146 (15%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           ++FPDI Q +        DGT I EL  +I     LV L L  C+ L  LP +I  L  L
Sbjct: 862 EKFPDIAQHMPCLSKLYLDGTAITELPSSISYATELVLLDLKNCRKLWSLPSSICQLTLL 921

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            TL+LSG S              L +  +    +  LP +++ L       L++CK+L++
Sbjct: 922 ETLSLSGCS-------------DLGKCEVNSGNLDALPRTLDQLRNLWRLELQNCKSLRA 968

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVT 793
           LP   +   SL  +  S C  L++++
Sbjct: 969 LPVLPS---SLEFINASNCESLEDIS 991


>gi|147859739|emb|CAN78885.1| hypothetical protein VITISV_037610 [Vitis vinifera]
          Length = 785

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 233/554 (42%), Gaps = 108/554 (19%)

Query: 2   ASMKDLSD-LYLDGTSITEVPSSIELLTGLELLTLKGCKN-------------------- 40
            SMK L + L LD + I E+PSSI  L  L++L L  C N                    
Sbjct: 225 GSMKHLKEQLRLDESRIKELPSSIGYLESLKILNLSYCSNFEKFLEIQGSMKHLRELSLK 284

Query: 41  ---LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
              +  LP  I  L+ L  L  SGCS  +KFP+I  +ME +  L LD T+I  +P SI  
Sbjct: 285 ETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKGLPCSISH 344

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L  L+ L +  CKNL  LP++I GLKSL+ ++L+GC KLE   +    +E LE L +  T
Sbjct: 345 LTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCSKLEAFLEIREDMEQLERLFLLET 404

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV-- 215
           AI     SI  ++ L+SL    C +        + LP + +G  +C  +L + + + +  
Sbjct: 405 AITELPPSIEHLRGLKSLELINCEKL-------VSLP-DSIGNLTCLRSLFVRNCSKLHN 456

Query: 216 ---------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
                    C L  LDL  C L E  IP D+  L SL+ L ++ N    +P  IS L  L
Sbjct: 457 LPDNLRSLKCCLRVLDLGGCNLMEGEIPHDLWCLSSLEYLDISDNYIRCIPVGISQLSKL 516

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
             L +  C  L+ + ++P +  ++ A+GC  L T                          
Sbjct: 517 RTLLMNHCPMLEEITELPSSRTWMEAHGCPCLET-------------------------- 550

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
              + S+L   L  +  S    K +IV PGS  IP+W  +Q  G  + +  P   Y  N 
Sbjct: 551 -ETSSSLLWSSLLKRFKSPIQWKFNIVIPGSSGIPEWVSHQRMGCEVKIKLPMNWYEDNN 609

Query: 386 VVGFAICCVFQVPKHSTGTYLFHSYPAHEL-ECSMDGSGEGHY-------IYFRGKF--- 434
           ++GF +   F    H         Y    + +C +  S    Y        Y R K    
Sbjct: 610 LLGFVL--FFHHVPHDDDECETTMYSTMFIPQCILTISHGDQYEQLDNICFYHRCKRYWV 667

Query: 435 ------------GHVVSDHLWLLFLPR-------HGHNW-----QFESNLIRLSFRSISD 470
                       G      LW+ + P+           W      FE+ + R SFR   +
Sbjct: 668 SGLSYDSMYYDNGGTSDPALWVTYFPQIAIPSKYRSRKWNYFKAHFETPMDRGSFRCGDN 727

Query: 471 PTWKVKRCGFHPIY 484
            ++KVK CG H IY
Sbjct: 728 ASFKVKSCGIHLIY 741



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 145/317 (45%), Gaps = 40/317 (12%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG- 85
           +  LE   L+GC        +I  LK L  L L GC  L+ FP I    E L  LYL+G 
Sbjct: 156 MPNLERPNLEGCTRWCEFHSSIGDLKRLTYLNLGGCEHLQSFP-ISMKFESLKVLYLNGC 214

Query: 86  ---TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
               +  E+  S++ L   E L L+E + +  LPSSI  L+SLK LNLS C   E   + 
Sbjct: 215 QNLENFPEIHGSMKHLK--EQLRLDESR-IKELPSSIGYLESLKILNLSYCSNFEKFLEI 271

Query: 143 LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--------EPPASASWHLHLP 194
            G ++ L EL +  TAI+   ++I  ++ L  L FSGC+        +    +   L L 
Sbjct: 272 QGSMKHLRELSLKETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQKNMESICSLSLD 331

Query: 195 FNLLGKSSCPVALM----------------LP-SLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           +  +    C ++ +                LP ++ G+ SL  + L+ C   EA +    
Sbjct: 332 YTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCSKLEAFLEIRE 391

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NG 294
           D +  L+ L+L       LP SI  L  L+ LEL +C++L SLP    NL  +R+     
Sbjct: 392 D-MEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKLVSLPDSIGNLTCLRSLFVRN 450

Query: 295 CSSLVTL---FGALKLC 308
           CS L  L     +LK C
Sbjct: 451 CSKLHNLPDNLRSLKCC 467



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 31/180 (17%)

Query: 655 DEFPDI--------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER---------- 696
           + FP+I         Q+  D + I+EL  +I  L  L  L L+ C N E+          
Sbjct: 218 ENFPEIHGSMKHLKEQLRLDESRIKELPSSIGYLESLKILNLSYCSNFEKFLEIQGSMKH 277

Query: 697 -------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
                        LP  I  L+ L  L+ SG S F +FPEI  + + +  + L+ TAI+G
Sbjct: 278 LRELSLKETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKG 337

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP SI  L+      +++CKNL+ LP+ I GL+SLR +  +GCSKL+   E    +E LE
Sbjct: 338 LPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCSKLEAFLEIREDMEQLE 397



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 7/149 (4%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           ++FP+I + +        D T I+ L  +I  L  L  L +  CKNL  LP  I  LK L
Sbjct: 313 EKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSL 372

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             ++L+G SK   F EI    +QL  + L  TAI  LP SIE L G     L +C+ L S
Sbjct: 373 RGISLNGCSKLEAFLEIREDMEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKLVS 432

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           LP +I  L  LR ++   CSKL N+ + L
Sbjct: 433 LPDSIGNLTCLRSLFVRNCSKLHNLPDNL 461



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 47/163 (28%)

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFR-----------------------EFPE 723
            L GC        +I  LK L+ LNL G    +                        FPE
Sbjct: 163 NLEGCTRWCEFHSSIGDLKRLTYLNLGGCEHLQSFPISMKFESLKVLYLNGCQNLENFPE 222

Query: 724 ITSSRDQLLE-IHLEGTAIRGLPASIELLSGNILSNLKDCKN------------------ 764
           I  S   L E + L+ + I+ LP+SI  L    + NL  C N                  
Sbjct: 223 IHGSMKHLKEQLRLDESRIKELPSSIGYLESLKILNLSYCSNFEKFLEIQGSMKHLRELS 282

Query: 765 -----LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                +K LP+ I  L +L ++  SGCS  +   E    +ES+
Sbjct: 283 LKETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQKNMESI 325


>gi|296089464|emb|CBI39283.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 158/554 (28%), Positives = 233/554 (42%), Gaps = 107/554 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN-------------------- 40
             +M  L++L LD + I E+PSSI  L  L++L L  C N                    
Sbjct: 58  FTNMGLLTELRLDESRIKELPSSIGYLESLKILNLSYCSNFEKFLEIQGSMKHLRELSLK 117

Query: 41  ---LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
              +  LP  I  L+ L  L  SGCS  +KFP+I  +ME +  L LD T+I  +P SI  
Sbjct: 118 ETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQKNMESICSLSLDYTAIKGLPCSISH 177

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L  L+ L +  CKNL  LP++I GLKSL+ ++L+GC KLE   +    +E LE L +  T
Sbjct: 178 LTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCSKLEAFLEIREDMEQLERLFLLET 237

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV-- 215
           AI     SI  ++ L+SL    C +        + LP + +G  +C  +L + + + +  
Sbjct: 238 AITELPPSIEHLRGLKSLELINCEKL-------VSLP-DSIGNLTCLRSLFVRNCSKLHN 289

Query: 216 ---------CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
                    C L  LDL  C L E  IP D+  L SL+ L ++ N    +P  IS L  L
Sbjct: 290 LPDNLRSLKCCLRVLDLGGCNLMEGEIPHDLWCLSSLEYLDISDNYIRCIPVGISQLSKL 349

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
             L +  C  L+ + ++P +  ++ A+GC  L T                          
Sbjct: 350 RTLLMNHCPMLEEITELPSSRTWMEAHGCPCLET-------------------------- 383

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
              + S+L   L  +  S    K +IV PGS  IP+W  +Q  G  + +  P   Y  N 
Sbjct: 384 -ETSSSLLWSSLLKRFKSPIQWKFNIVIPGSSGIPEWVSHQRMGCEVKIKLPMNWYEDNN 442

Query: 386 VVGFAICCVFQVPKHSTGTYLFHSYPAHEL-ECSMDGSGEGHY-------IYFRGKF--- 434
           ++GF +   F    H         Y    + +C +  S    Y        Y R K    
Sbjct: 443 LLGFVL--FFHHVPHDDDECETTMYSTMFIPQCILTISHGDQYEQLDNICFYHRCKRYWV 500

Query: 435 ------------GHVVSDHLWLLFLPR-------HGHNW-----QFESNLIRLSFRSISD 470
                       G      LW+ + P+           W      FE+ + R SFR   +
Sbjct: 501 SGLSYDSMYYDNGDTSDPALWVTYFPQIAIPSKYRSRKWNYFKAHFETPMDRGSFRCGDN 560

Query: 471 PTWKVKRCGFHPIY 484
            ++KVK CG H IY
Sbjct: 561 ASFKVKSCGIHLIY 574



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 138/277 (49%), Gaps = 20/277 (7%)

Query: 45  PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELL 104
           P+ I SL  L+ L L  CSK +KF ++  +M  L++L LD + I E+PSSI  L  L++L
Sbjct: 31  PIYIRSLTSLKILSLRECSKFEKFSEMFTNMGLLTELRLDESRIKELPSSIGYLESLKIL 90

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
            L+ C N  +       +K L+ L+L     ++ +P+ +G++E+LE L  SG +      
Sbjct: 91  NLSYCSNFEKFLEIQGSMKHLRELSLKE-TAIKELPNNIGRLEALEILSFSGCSNFEKFP 149

Query: 165 SIFLMKNLR-----SLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLP-SLTGVCS 217
            I   KN+      SL ++     P S S   HL   + L   +C     LP ++ G+ S
Sbjct: 150 EI--QKNMESICSLSLDYTAIKGLPCSIS---HLTRLDHLEMENCKNLRCLPNNICGLKS 204

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L  + L+ C   EA +    +++  L+ L+L       LP SI  L  L+ LEL +C++L
Sbjct: 205 LRGISLNGCSKLEAFLEIR-EDMEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKL 263

Query: 278 QSLPQIPPNLQFVRA---NGCSSLVTL---FGALKLC 308
            SLP    NL  +R+     CS L  L     +LK C
Sbjct: 264 VSLPDSIGNLTCLRSLFVRNCSKLHNLPDNLRSLKCC 300



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 26/183 (14%)

Query: 647 CSRLWEEADEFPD---IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER------- 696
           CS+  + ++ F +   + ++  D + I+EL  +I  L  L  L L+ C N E+       
Sbjct: 48  CSKFEKFSEMFTNMGLLTELRLDESRIKELPSSIGYLESLKILNLSYCSNFEKFLEIQGS 107

Query: 697 ----------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                           LP  I  L+ L  L+ SG S F +FPEI  + + +  + L+ TA
Sbjct: 108 MKHLRELSLKETAIKELPNNIGRLEALEILSFSGCSNFEKFPEIQKNMESICSLSLDYTA 167

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           I+GLP SI  L+      +++CKNL+ LP+ I GL+SLR +  +GCSKL+   E    +E
Sbjct: 168 IKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSLRGISLNGCSKLEAFLEIREDME 227

Query: 801 SLE 803
            LE
Sbjct: 228 QLE 230



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 7/149 (4%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           ++FP+I + +        D T I+ L  +I  L  L  L +  CKNL  LP  I  LK L
Sbjct: 146 EKFPEIQKNMESICSLSLDYTAIKGLPCSISHLTRLDHLEMENCKNLRCLPNNICGLKSL 205

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             ++L+G SK   F EI    +QL  + L  TAI  LP SIE L G     L +C+ L S
Sbjct: 206 RGISLNGCSKLEAFLEIREDMEQLERLFLLETAITELPPSIEHLRGLKSLELINCEKLVS 265

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           LP +I  L  LR ++   CSKL N+ + L
Sbjct: 266 LPDSIGNLTCLRSLFVRNCSKLHNLPDNL 294



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 23/128 (17%)

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P  I +L  L  L+L   SKF +F E+ ++   L E+ L+ + I+ LP+SI  L    + 
Sbjct: 31  PIYIRSLTSLKILSLRECSKFEKFSEMFTNMGLLTELRLDESRIKELPSSIGYLESLKIL 90

Query: 758 NLKDCKN-----------------------LKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           NL  C N                       +K LP+ I  L +L ++  SGCS  +   E
Sbjct: 91  NLSYCSNFEKFLEIQGSMKHLRELSLKETAIKELPNNIGRLEALEILSFSGCSNFEKFPE 150

Query: 795 TLGKVESL 802
               +ES+
Sbjct: 151 IQKNMESI 158


>gi|224127750|ref|XP_002329168.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870949|gb|EEF08080.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1018

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 229/485 (47%), Gaps = 68/485 (14%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ EV SSI+ L  LE+L L GCKNL  +P  I S K LR L+LS C K++K P+I   +
Sbjct: 579  SLLEVHSSIQHLEKLEILILSGCKNLGIVPKRIES-KFLRILDLSHCKKVRKCPEISGYL 637

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            E+L    L GT+I E                        LP SI+ +K ++ L+LSGC  
Sbjct: 638  EEL---MLQGTAIEE------------------------LPQSISKVKEIRILDLSGCSN 670

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP- 194
            +   P   G ++ L  L    T I    SSI  +  L  L  + C +  +  +    L  
Sbjct: 671  ITKFPQIPGNIKQLRLL---WTVIEEVPSSIEFLATLGVLEMNFCEQLSSLPTCICKLKC 727

Query: 195  FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NN 252
               L  S CP     P  L  + SL  LDLS   + E  +PS I  L  L  L LNR +N
Sbjct: 728  LERLELSYCPKLESFPEILEPMESLKCLDLSGTAIKE--LPSSIKFLSCLYMLQLNRCDN 785

Query: 253  FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-FGALKLCRSK 311
             V+LP+ I  L  L+ L+L  CK L SLP++PP+++F+ A GC SL TL  G      S 
Sbjct: 786  LVSLPSFIEKLPVLKYLKLNYCKSLLSLPELPPSVEFLEAVGCESLETLSIGK----ESN 841

Query: 312  YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
            +  +N  +  KL +K  LA + ++    +Q+      +++I+ PGS+IP WF  Q+ GSS
Sbjct: 842  FWYLNFANCFKLDQKPLLADTQMK----IQS-GKMRREVTIILPGSEIPGWFCDQSMGSS 896

Query: 372  ITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY-IYF 430
            + +  P+   N ++  GFA   VF  P   T       +     EC   G  + H+ + F
Sbjct: 897  VAIKLPT---NCHQHNGFAFGMVFVFPDPPTELQCNRIFIC---ECHARGENDEHHDVIF 950

Query: 431  R-----GKFGHVVSDHLWLLFLP----RHGHNWQFESNLIRLSFRSISDPTW-----KVK 476
                   +   V SD + LL+ P    +     Q+    I   F  + +P+      KVK
Sbjct: 951  NLSTCAYELRSVESDQMLLLYNPCEFVKRDCISQYSGKEISFEFY-LDEPSGLQNRCKVK 1009

Query: 477  RCGFH 481
            RCG +
Sbjct: 1010 RCGVY 1014



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/208 (41%), Positives = 111/208 (53%), Gaps = 10/208 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  L L  T I EVPSSIE L  L +L +  C+ LSSLP  I  LKCL  LELS C KL
Sbjct: 680 NIKQLRLLWTVIEEVPSSIEFLATLGVLEMNFCEQLSSLPTCICKLKCLERLELSYCPKL 739

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           + FP+I+  ME L  L L GT+I E+PSSI+ L  L +L LN C NLV LPS I  L  L
Sbjct: 740 ESFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVSLPSFIEKLPVL 799

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NE 182
           K L L+ C  L ++P+    VE LE +          T SI    N   L F+ C   ++
Sbjct: 800 KYLKLNYCKSLLSLPELPPSVEFLEAVGCESLE----TLSIGKESNFWYLNFANCFKLDQ 855

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLP 210
            P  A   + +     GK    V ++LP
Sbjct: 856 KPLLADTQMKIQS---GKMRREVTIILP 880



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 77/167 (46%), Gaps = 19/167 (11%)

Query: 641 PQEPGNCSRL---WEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
           PQ PGN  +L   W   +E P                 +IE L  L  L +N C+ L  L
Sbjct: 675 PQIPGNIKQLRLLWTVIEEVPS----------------SIEFLATLGVLEMNFCEQLSSL 718

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P  I  LK L  L LS   K   FPEI    + L  + L GTAI+ LP+SI+ LS   + 
Sbjct: 719 PTCICKLKCLERLELSYCPKLESFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYML 778

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            L  C NL SLPS I  L  L+ +  + C  L ++ E    VE LE 
Sbjct: 779 QLNRCDNLVSLPSFIEKLPVLKYLKLNYCKSLLSLPELPPSVEFLEA 825



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 111/263 (42%), Gaps = 66/263 (25%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL--------- 65
           T + E+P  +     LE + L  C++L  +  +I  L+ L  L LSGC  L         
Sbjct: 555 TYLLEIPD-LSRAKNLEYIDLSFCESLLEVHSSIQHLEKLEILILSGCKNLGIVPKRIES 613

Query: 66  ----------------------------------KKFPQIVASMEDLSKLYLDGTS---- 87
                                             ++ PQ ++ ++++  L L G S    
Sbjct: 614 KFLRILDLSHCKKVRKCPEISGYLEELMLQGTAIEELPQSISKVKEIRILDLSGCSNITK 673

Query: 88  -----------------IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
                            I EVPSSIE L  L +L +N C+ L  LP+ I  LK L+ L L
Sbjct: 674 FPQIPGNIKQLRLLWTVIEEVPSSIEFLATLGVLEMNFCEQLSSLPTCICKLKCLERLEL 733

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
           S C KLE+ P+ L  +ESL+ LD+SGTAI+   SSI  +  L  L  + C+   +  S+ 
Sbjct: 734 SYCPKLESFPEILEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVSLPSFI 793

Query: 191 LHLP-FNLLGKSSCPVALMLPSL 212
             LP    L  + C   L LP L
Sbjct: 794 EKLPVLKYLKLNYCKSLLSLPEL 816



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 24/215 (11%)

Query: 656 EFPDIVQV-------LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           E PD+ +        LS    + E+  +I+ L  L  L L+GCKNL  +P+ I + K+L 
Sbjct: 559 EIPDLSRAKNLEYIDLSFCESLLEVHSSIQHLEKLEILILSGCKNLGIVPKRIES-KFLR 617

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
            L+LS   K R+ PEI+   ++L+   L+GTAI  LP SI  +    + +L  C N+   
Sbjct: 618 ILDLSHCKKVRKCPEISGYLEELM---LQGTAIEELPQSISKVKEIRILDLSGCSNITKF 674

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV----RLSSWNRPKMQNDFDCVEQS 824
           P     ++ LR+++ +   ++ +  E L  +  LE+    +LSS   P       C+E+ 
Sbjct: 675 PQIPGNIKQLRLLW-TVIEEVPSSIEFLATLGVLEMNFCEQLSSL--PTCICKLKCLERL 731

Query: 825 AVETVTKLAK-AELLRDSDSWKKNVDKCMKLSTTA 858
            +    KL    E+L   +S      KC+ LS TA
Sbjct: 732 ELSYCPKLESFPEILEPMESL-----KCLDLSGTA 761



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 31/151 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+ L  L L GT+I E+PSSI+ L+ L +L L  C NL SLP  I  L  L+ L+L+
Sbjct: 746 LEPMESLKCLDLSGTAIKELPSSIKFLSCLYMLQLNRCDNLVSLPSFIEKLPVLKYLKLN 805

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C  L   P                    E+P S+E L  +       C++L  L  SI 
Sbjct: 806 YCKSLLSLP--------------------ELPPSVEFLEAV------GCESLETL--SIG 837

Query: 121 GLKSLKTLNLSGCCKLENVP---DTLGKVES 148
              +   LN + C KL+  P   DT  K++S
Sbjct: 838 KESNFWYLNFANCFKLDQKPLLADTQMKIQS 868


>gi|47681363|gb|AAT37497.1| N-like protein [Nicotiana tabacum]
          Length = 941

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/301 (37%), Positives = 164/301 (54%), Gaps = 27/301 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M +++ L+ LY    ++ EV  S+   + L  L L  CK+L   P    +++ L  L L 
Sbjct: 644 MPNLEYLNMLYC--RNLEEVHHSLRCCSKLIRLNLNNCKSLKRFPCV--NVESLEYLSLE 699

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSI 119
            CS L+KFP+I   M+   ++++ G+ I E+PSSI +    +  L L   + LV LPSSI
Sbjct: 700 YCSSLEKFPEIHGRMKPEIQIHMQGSGIRELPSSITQYQTHITKLDLRGMEKLVALPSSI 759

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSL +L++SGC KLE++P+ +G +E+LEELD S T I RP SSI  +  L+   F  
Sbjct: 760 CRLKSLVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPSSIIRLSKLKIFDFGS 819

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             +       H  LP               P + G  SL  L L +C L +  +P D+ +
Sbjct: 820 SKDRV-----HFELP---------------PVVEGFRSLETLSLRNCNLIDGGLPEDMGS 859

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRANGCSS 297
           L SLK+LYL+ NNF  LP SI+ L  L  LEL +CKRL  LP+     NL+++   GCS 
Sbjct: 860 LSSLKKLYLSGNNFEHLPRSIAQLGALRILELRNCKRLTQLPEFTGMLNLEYLDLEGCSY 919

Query: 298 L 298
           L
Sbjct: 920 L 920



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)

Query: 683 LVQLTLNGCKNLERLP-RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
           L++L LN CK+L+R P   + +L+YLS    S L KF   PEI       ++IH++G+ I
Sbjct: 671 LIRLNLNNCKSLKRFPCVNVESLEYLSLEYCSSLEKF---PEIHGRMKPEIQIHMQGSGI 727

Query: 742 RGLPASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           R LP+SI     +I   +L+  + L +LPS+I  L+SL  +  SGC KL+++ E +G +E
Sbjct: 728 RELPSSITQYQTHITKLDLRGMEKLVALPSSICRLKSLVSLSVSGCFKLESLPEEVGDLE 787

Query: 801 SLE 803
           +LE
Sbjct: 788 NLE 790



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 11/160 (6%)

Query: 655 DEFPDI-------VQVLSDGTDIRELSLAI-ELLFGLVQLTLNGCKNLERLPRTISALKY 706
           ++FP+I       +Q+   G+ IREL  +I +    + +L L G + L  LP +I  LK 
Sbjct: 705 EKFPEIHGRMKPEIQIHMQGSGIRELPSSITQYQTHITKLDLRGMEKLVALPSSICRLKS 764

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L +L++SG  K    PE     + L E+    T I   P+SI  LS   + +    K+  
Sbjct: 765 LVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPSSIIRLSKLKIFDFGSSKDRV 824

Query: 767 --SLPSTINGLRSLRMMYPSGCSKLK-NVTETLGKVESLE 803
              LP  + G RSL  +    C+ +   + E +G + SL+
Sbjct: 825 HFELPPVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLK 864



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 2/97 (2%)

Query: 697 LPRTISALKYLSTLNLSGLSKFRE-FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
           LP  +   + L TL+L   +      PE   S   L +++L G     LP SI  L    
Sbjct: 828 LPPVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLKKLYLSGNNFEHLPRSIAQLGALR 887

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           +  L++CK L  LP    G+ +L  +   GCS L+ V
Sbjct: 888 ILELRNCKRLTQLPE-FTGMLNLEYLDLEGCSYLEEV 923


>gi|359496030|ref|XP_002277205.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1195

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 169/302 (55%), Gaps = 37/302 (12%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++   +L  L L+G   +  +  S+ +L  L  L+L+ C NL   P +I  LK L+   L
Sbjct: 785  LSRASNLERLVLEGCIHLCAIHPSLGVLNKLIFLSLRDCINLRHFPNSIE-LKSLQIFIL 843

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKL+KFP+I   ME LS+L+LDG  I E+PSSIE   GL +L L  CK L  LP+SI
Sbjct: 844  SGCSKLEKFPEIRGYMEHLSELFLDGIGIEELPSSIEYAIGLVVLDLTNCKELRSLPNSI 903

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L+SLKTL LS C KLE++P   GK                       +K LR LY   
Sbjct: 904  CNLESLKTLLLSDCSKLESLPQNFGK-----------------------LKQLRKLY--- 937

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             N+  A        P  LL KSS  +  +LP L+ + SL  L+LSDC + +    S +  
Sbjct: 938  -NQTFA-------FPL-LLWKSSNSLDFLLPPLSTLRSLQDLNLSDCNIVDGPQLSVLSL 988

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            + SLK+L L  NNFV+LP+SIS L  L  L+L +C+RLQ++P++  +++ + A+ C  L 
Sbjct: 989  MLSLKKLNLTGNNFVSLPSSISQLPQLTVLKLLNCRRLQAIPELLSSIEVINAHNCIPLE 1048

Query: 300  TL 301
            T+
Sbjct: 1049 TI 1050



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 1/127 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           ++ +L  L+ L+L  C NL   P +I  LK L    LSG SK  +FPEI    + L E+ 
Sbjct: 808 SLGVLNKLIFLSLRDCINLRHFPNSIE-LKSLQIFILSGCSKLEKFPEIRGYMEHLSELF 866

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L+G  I  LP+SIE   G ++ +L +CK L+SLP++I  L SL+ +  S CSKL+++ + 
Sbjct: 867 LDGIGIEELPSSIEYAIGLVVLDLTNCKELRSLPNSICNLESLKTLLLSDCSKLESLPQN 926

Query: 796 LGKVESL 802
            GK++ L
Sbjct: 927 FGKLKQL 933



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 46/198 (23%)

Query: 647  CSRLWEEADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    ++FP+I        ++  DG  I EL  +IE   GLV L L  CK L  LP 
Sbjct: 846  CSKL----EKFPEIRGYMEHLSELFLDGIGIEELPSSIEYAIGLVVLDLTNCKELRSLPN 901

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL----PASIELLSGNI 755
            +I  L+ L TL LS  SK    P+      QL +++ +  A   L      S++ L   +
Sbjct: 902  SICNLESLKTLLLSDCSKLESLPQNFGKLKQLRKLYNQTFAFPLLLWKSSNSLDFLLPPL 961

Query: 756  LS-------NLKDC------------------------KNLKSLPSTINGLRSLRMMYPS 784
             +       NL DC                         N  SLPS+I+ L  L ++   
Sbjct: 962  STLRSLQDLNLSDCNIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSSISQLPQLTVLKLL 1021

Query: 785  GCSKLKNVTETLGKVESL 802
             C +L+ + E L  +E +
Sbjct: 1022 NCRRLQAIPELLSSIEVI 1039



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 57/136 (41%), Gaps = 21/136 (15%)

Query: 350 LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
            S VFPG  IP WFM+ ++G  + V      Y+ N  +GFA+  V   PK  +    + +
Sbjct: 25  FSTVFPGRTIPDWFMHHSKGHEVDVEVAPNWYDSN-FLGFAVSAVI-APKDGSIKKGWST 82

Query: 410 YPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSIS 469
           Y      C +D     H      K+    S          + H  Q E   I  SF S +
Sbjct: 83  Y------CDLD----SHDPDLEFKYSRECS--------FTNAHTSQLEDTTITFSF-STN 123

Query: 470 DPTWKVKRCGFHPIYM 485
             +  VKRCG  P+YM
Sbjct: 124 RKSCIVKRCGVCPVYM 139


>gi|302398863|gb|ADL36726.1| HD domain class transcription factor [Malus x domestica]
          Length = 909

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/283 (38%), Positives = 157/283 (55%), Gaps = 30/283 (10%)

Query: 48  ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYL 106
           I   + L++++LS    L + P     +++L +L L+G T++ E+  SI  L  L +L  
Sbjct: 628 IKYFRKLKSIDLSYSQNLTRTPDFTG-LQNLERLVLEGCTNLVEIHPSIASLKCLRILNF 686

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK--------------------- 145
             CK++  LP+ +  +++L+  +LSGC K++ +P+  G+                     
Sbjct: 687 RNCKSIKILPNEVK-METLEVFDLSGCSKVKKIPEFGGQMKNVSKLYLGGTAVEELPLSF 745

Query: 146 ---VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS 202
              +ESLEELD++G +IR P SSI  MKNL    F GCN PP    +   LP  L  ++S
Sbjct: 746 KGLIESLEELDLTGISIREPLSSIGPMKNLDLSSFHGCNGPPPQPRFSF-LPSGLFPRNS 804

Query: 203 -CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
             PV L+L SL    SL KLDLSDC L + A+P DI  L SLKEL L  NNFV+LP SI 
Sbjct: 805 LSPVNLVLASLKDFRSLKKLDLSDCNLCDGALPEDIGCLSSLKELNLGGNNFVSLPTSIG 864

Query: 262 GLLNLEELELEDCKRLQSLPQIPPNLQ-FVRANGCSSLVTLFG 303
            L  L    L +CKRLQ LP +P N + +++ + C+SL  L G
Sbjct: 865 CLSKLSFFNLNNCKRLQQLPDLPLNNRIYLKTDNCTSLQMLPG 907



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 33/168 (19%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIE-LLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             MK++S LYL GT++ E+P S + L+  LE L L G     S+   +SS+  ++ L+LS
Sbjct: 723 GQMKNVSKLYLGGTAVEELPLSFKGLIESLEELDLTGI----SIREPLSSIGPMKNLDLS 778

Query: 61  ---GCSKLKKFPQ-------------------IVASMED---LSKLYLDGTSIAE--VPS 93
              GC+     P+                   ++AS++D   L KL L   ++ +  +P 
Sbjct: 779 SFHGCNGPPPQPRFSFLPSGLFPRNSLSPVNLVLASLKDFRSLKKLDLSDCNLCDGALPE 838

Query: 94  SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            I  L  L+ L L    N V LP+SI  L  L   NL+ C +L+ +PD
Sbjct: 839 DIGCLSSLKELNLG-GNNFVSLPTSIGCLSKLSFFNLNNCKRLQQLPD 885



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL   T++ E+  +I  L  L  L    CK+++ LP  +  ++ L   +LSG SK ++ P
Sbjct: 661 VLEGCTNLVEIHPSIASLKCLRILNFRNCKSIKILPNEVK-METLEVFDLSGCSKVKKIP 719

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIE 749
           E       + +++L GTA+  LP S +
Sbjct: 720 EFGGQMKNVSKLYLGGTAVEELPLSFK 746



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 64/244 (26%)

Query: 618 ISVDSGCM-SCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTD------- 669
           IS  S CM    ++   + VR +S +EPG  SRLW   D    I  VL+  T        
Sbjct: 490 ISGKSVCMHDLIQEMAWEIVRGESFEEPGARSRLWLRDD----IFHVLTKNTGKKAIEGI 545

Query: 670 ---IRELSLA---IELLFGLVQLTLNGCKNL------ERLPRTISALKY----------- 706
              +RE   A    E    +  L L    NL      + LP  +  LK+           
Sbjct: 546 VLRLREFEEAHWNPEAFSKMCNLKLLDIDNLRLSVGPKYLPNALRFLKWSWYPSKFLPPG 605

Query: 707 -----LSTLNL---------SGLSKFREFPEITSSRDQ-------------LLEIHLEG- 738
                L+ L+L         +G+  FR+   I  S  Q             L  + LEG 
Sbjct: 606 FQPNELTELSLPHSKIDYLWNGIKYFRKLKSIDLSYSQNLTRTPDFTGLQNLERLVLEGC 665

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T +  +  SI  L    + N ++CK++K LP+ +  + +L +   SGCSK+K + E  G+
Sbjct: 666 TNLVEIHPSIASLKCLRILNFRNCKSIKILPNEVK-METLEVFDLSGCSKVKKIPEFGGQ 724

Query: 799 VESL 802
           ++++
Sbjct: 725 MKNV 728


>gi|297741884|emb|CBI33319.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/291 (38%), Positives = 151/291 (51%), Gaps = 50/291 (17%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
             G+ + EVP  I+  + L+ L L+ C+NL+SLP +I   K L TL  SGCS+L+ FP+I
Sbjct: 423 FKGSDMNEVPI-IKNPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 481

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           +  ME L KLYL+GT+I E+PSSIE L GL+ L L  CKNLV LP SI  L S KTL + 
Sbjct: 482 LQDMESLRKLYLNGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVE 541

Query: 132 GCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
            C   + +PD LG+++SL  L V    ++     S+  + +LR+L   GCN         
Sbjct: 542 SCPNFKKLPDNLGRLQSLLHLSVGHLDSMNFQLPSLSGLCSLRTLRLKGCN--------- 592

Query: 191 LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                                                L E   PS+I  L SL  L L  
Sbjct: 593 -------------------------------------LRE--FPSEIYYLSSLVTLSLRG 613

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           N+F  +P  IS L NLE L+L  CK LQ +P++P  L+ + A+ C+SL  L
Sbjct: 614 NHFSRIPDGISQLYNLEHLDLGHCKMLQHIPELPSGLRCLDAHHCTSLENL 664



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 7/157 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+ L  LYL+GT+I E+PSSIE L GL+ L L+ CKNL +LP +I +L   +TL + 
Sbjct: 482 LQDMESLRKLYLNGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVE 541

Query: 61  GCSKLKKFPQIVASMEDLSKL---YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
            C   KK P  +  ++ L  L   +LD  +  ++P S+  L  L  L L  C NL   PS
Sbjct: 542 SCPNFKKLPDNLGRLQSLLHLSVGHLDSMNF-QLP-SLSGLCSLRTLRLKGC-NLREFPS 598

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
            I  L SL TL+L G      +PD + ++ +LE LD+
Sbjct: 599 EIYYLSSLVTLSLRG-NHFSRIPDGISQLYNLEHLDL 634



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+D+ E+ + I+    L  L L  C+NL  LP +I   K L+TL+ SG S+   FPEI  
Sbjct: 425 GSDMNEVPI-IKNPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 483

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
             + L +++L GTAI+ +P+SIE L G     L++CKNL +LP +I  L S + +    C
Sbjct: 484 DMESLRKLYLNGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVESC 543

Query: 787 SKLKNVTETLGKVESL 802
              K + + LG+++SL
Sbjct: 544 PNFKKLPDNLGRLQSL 559



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 17/167 (10%)

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           IPS I  L SL++L L   +F ++P +I+ L  L+ L L  C  L+ +P++P  LQ + A
Sbjct: 94  IPSHICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPELPSRLQLLDA 153

Query: 293 NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
           +G +   +    L L    ++++NC            + +   +       S  G    I
Sbjct: 154 HGSNHTSSRAPFLPL----HSLVNC-----------FSWAQDSQLTSFSDSSYHGKGTCI 198

Query: 353 VFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP 398
             PGS  IP+W M +          P   +  N+ +GFAICCV+ VP
Sbjct: 199 FLPGSDGIPEWIMGRTNRHFTRTELPQNWHQNNEFLGFAICCVY-VP 244



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 82/177 (46%), Gaps = 27/177 (15%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I+Q +        +GT I+E+  +IE L GL  L L  CKNL  LP 
Sbjct: 472 CSQL----ESFPEILQDMESLRKLYLNGTAIKEIPSSIERLRGLQYLLLRNCKNLVNLPE 527

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI---HLEGTAIRGLPASIELLSGNIL 756
           +I  L    TL +     F++ P+       LL +   HL+    + LP+   L S   L
Sbjct: 528 SICNLTSFKTLVVESCPNFKKLPDNLGRLQSLLHLSVGHLDSMNFQ-LPSLSGLCSLRTL 586

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMM---------YPSGCSKLKNVTE-TLGKVESLE 803
             LK C NL+  PS I  L SL  +          P G S+L N+    LG  + L+
Sbjct: 587 -RLKGC-NLREFPSEIYYLSSLVTLSLRGNHFSRIPDGISQLYNLEHLDLGHCKMLQ 641



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 24/111 (21%)

Query: 52  KCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN 111
           K L+TL L  CSKL + P  +  +  L KL L+G   + +P +I                
Sbjct: 78  KGLQTLLLQECSKLHQIPSHICYLSSLQKLNLEGGHFSSIPPTI---------------- 121

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
                   N L  LK LNLS C  LE +P+   +++ L+    + T+ R P
Sbjct: 122 --------NQLSRLKALNLSHCNNLEQIPELPSRLQLLDAHGSNHTSSRAP 164



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 5   KDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           K L  L L   S + ++PS I  L+ L+ L L+G  + SS+P TI+ L  L+ L LS C+
Sbjct: 78  KGLQTLLLQECSKLHQIPSHICYLSSLQKLNLEG-GHFSSIPPTINQLSRLKALNLSHCN 136

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
            L++ P++ + ++      LD        S    LP
Sbjct: 137 NLEQIPELPSRLQ-----LLDAHGSNHTSSRAPFLP 167


>gi|408537086|gb|AFU75196.1| nematode resistance-like protein, partial [Solanum tuberosum subsp.
           andigenum]
          Length = 307

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/288 (45%), Positives = 189/288 (65%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SIE L  L LL LK C+NL +LP  I  L+ L  L L+GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIENLGXLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++LYL  TS++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L+N+PD LG +  LEZL  + TAI+   SS+ L+KNL+ L  SGCN   +  S   H  
Sbjct: 131 XLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSMSLLKNLKXLSLSGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  J S++  L SL+ L LB NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCNISDGGJLSNLGFLXSLEILILBGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPAASISRLTRLKSLKLXXCGRLESLPELPPSIKGIYANECTSLMSI 290



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 1/132 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +IE L  LV L L  C+NL+ LP+ I  L+ L  L L+G SK R FP
Sbjct: 7   VLEECTSLVEINFSIENLGXLVLLNLKNCRNLKTLPKRIR-LEKLEILVLTGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E++L  T++  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKLKNVTE 794
            SGCS LKN+ +
Sbjct: 126 VSGCSXLKNLPD 137



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 64/92 (69%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++LYL  TS++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI 95
            LK  P  +  +  L +L+   T+I  +PSS+
Sbjct: 131 XLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSM 162



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 11/109 (10%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP+I + ++         T + EL  ++E L G+  + L+ CK+LE LP 
Sbjct: 58  CSKLRT----FPEIEEKMNCLAELYLXATSLSELPASVENLSGVGVINLSYCKHLESLPS 113

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI 748
           +I  LK L TL++SG S  +  P+       L Z+H   TAI+ +P+S+
Sbjct: 114 SIFRLKCLKTLDVSGCSXLKNLPDDLGLLVGLEZLHCTHTAIQTIPSSM 162


>gi|15234388|ref|NP_192938.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis
            thaliana]
 gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis
            thaliana]
 gi|332657683|gb|AEE83083.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 145/421 (34%), Positives = 211/421 (50%), Gaps = 40/421 (9%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +A+  +L  L L+G TS+ ++PS+I  L  L  L L+ C +L SLP  I + + L+TL L
Sbjct: 662  LANAHNLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDCTSLRSLPKGIKT-QSLQTLIL 720

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCS LKKFP I    E++  L LDGT I  +P SI+    L LL L  CK L  L S +
Sbjct: 721  SGCSSLKKFPLIS---ENVEVLLLDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDL 777

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LK L+ L LSGC +LE  P+    +ESLE L +  T+I      + L  N+++  FS 
Sbjct: 778  YKLKCLQELILSGCSQLEVFPEIKEDMESLEILLMDDTSITEMPKMMHL-SNIKT--FSL 834

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C       S H+          S  +  M P+L G   LT L LS C L    +P +I  
Sbjct: 835  C-----GTSSHV----------SVSMFFMPPTL-GCSRLTDLYLSRCSL--YKLPDNIGG 876

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SL+ L L+ NN   LP S + L NL+  +L+ CK L+SLP +P NLQ++ A+ C SL 
Sbjct: 877  LSSLQSLCLSGNNIENLPESFNQLNNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLE 936

Query: 300  TLFGAL------KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD-------P 346
            TL   L      +   S +   NC    +  + + +  + ++  L   A +        P
Sbjct: 937  TLANPLTPLTVGERIHSMFIFSNCYKLNQDAQASLVGHARIKSQLMANASAKRYYRGFVP 996

Query: 347  GHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYL 406
               + I +P ++IP WF +Q  G S+ +  P +  ++N  VG A+  V     +      
Sbjct: 997  EPLVGICYPATEIPSWFCHQRLGRSLEIPLPPHWCDIN-FVGLALSVVVSFKDYEDSAKR 1055

Query: 407  F 407
            F
Sbjct: 1056 F 1056



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 8/153 (5%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +++L   I  L  L+ L L  C +L  LP+ I   + L TL LSG S  ++FP I+ +
Sbjct: 677 TSLKKLPSTINCLEKLIYLNLRDCTSLRSLPKGIKT-QSLQTLILSGCSSLKKFPLISEN 735

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + LL   L+GT I+ LP SI+      L NLK+CK LK L S +  L+ L+ +  SGCS
Sbjct: 736 VEVLL---LDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCS 792

Query: 788 KLKNVTETLGKVESLEVRL----SSWNRPKMQN 816
           +L+   E    +ESLE+ L    S    PKM +
Sbjct: 793 QLEVFPEIKEDMESLEILLMDDTSITEMPKMMH 825



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 16/143 (11%)

Query: 656 EFPDIVQ----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           +FP I +    +L DGT I+ L  +I+    L  L L  CK L+ L   +  LK L  L 
Sbjct: 728 KFPLISENVEVLLLDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQELI 787

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           LSG S+   FPEI    + L  + ++ T+I  +P  +       LSN+K      SL  T
Sbjct: 788 LSGCSQLEVFPEIKEDMESLEILLMDDTSITEMPKMMH------LSNIKTF----SLCGT 837

Query: 772 INGLR-SLRMMYPS-GCSKLKNV 792
            + +  S+  M P+ GCS+L ++
Sbjct: 838 SSHVSVSMFFMPPTLGCSRLTDL 860


>gi|225460020|ref|XP_002269704.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1156

 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 201/431 (46%), Gaps = 29/431 (6%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            +M  L  ++LD + I E+PSSIE L  LE LTL  C+N    P    +L+ LR +  +  
Sbjct: 593  NMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVIN-ANR 651

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            + +K+ P+I  +M  L+KL+L  T+I E+P SI  L  LE L L  CKNL  LP+SI GL
Sbjct: 652  TDIKELPEI-HNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGL 710

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            KSL  LNL+GC  L   P+ +  +E L EL +S T I     SI  +K L  L    C  
Sbjct: 711  KSLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCEN 770

Query: 183  ---PPASASWHLHLPFNLLGKSSCPVALMLPS--LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                P S     HL    L   +C     LP    +    L +LDL+ C L + AIPSD+
Sbjct: 771  LVTLPDSIGNLTHL--RSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDL 828

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
              L  L+ L ++      +P +I  L NL  L +  C+ L+ +P++P  L+ + A GC  
Sbjct: 829  WCLSLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPH 888

Query: 298  LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP---GHKLSIVF 354
            L TL        S   ++N   S               +  E +  SD     H   +V 
Sbjct: 889  LGTLSTPSSPLWS--YLLNLFKSRT-------------QSCEYEIDSDSLWYFHVPKVVI 933

Query: 355  PGS-QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
            PGS  IPKW  + + G    +  P   Y  N  +GFA+     VP     ++    +   
Sbjct: 934  PGSGGIPKWISHPSMGRQAIIELPKNRYEDNNFLGFAV-FFHHVPLDDFWSHWHRRFLQF 992

Query: 414  ELECSMDGSGE 424
            EL  S D   E
Sbjct: 993  ELRISHDDQSE 1003



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 54/311 (17%)

Query: 24  IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
           +++L  L+++ L   + L+ +P  +SS+  L  L L  C +LKKFP+I  +M  L +++L
Sbjct: 544 MQILGNLKIIDLSRSRLLTKMP-ELSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHL 602

Query: 84  DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
           D + I E+PSSIE LP LE L L+ C+N  + P +   L+ L+ +N +    ++ +P+ +
Sbjct: 603 DCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVIN-ANRTDIKELPE-I 660

Query: 144 GKVESLEELDVSGTAIRRPTSSI-----------FLMKNLRSLYFSGCNEPPASASWHLH 192
             + SL +L +  TAI+    SI              KNLRSL  S C            
Sbjct: 661 HNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSIC------------ 708

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                                G+ SL  L+L+ C     A P  ++++  L+EL L++  
Sbjct: 709 ---------------------GLKSLGVLNLNGCS-NLVAFPEIMEDMEDLRELLLSKTP 746

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL---FGALK 306
              LP SI  L  LE LEL++C+ L +LP    NL  +R+     CS L  L     +L+
Sbjct: 747 ITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQ 806

Query: 307 LCRSKYTIINC 317
            C  +  +  C
Sbjct: 807 WCLRRLDLAGC 817



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 10/220 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+DL +L L  T ITE+P SIE L GLE L LK C+NL +LP +I +L  LR+L + 
Sbjct: 731 MEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVR 790

Query: 61  GCSKLKKFPQIVASMED-LSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
            CSKL   P  + S++  L +L L G ++ +  +PS +  L  L  L ++E   +  +P+
Sbjct: 791 NCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEIP-IPCIPT 849

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSI--FLMKNLR 173
           +I  L +L+TL ++ C  LE +P+   ++E LE       GT +  P+S +  +L+   +
Sbjct: 850 NIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGT-LSTPSSPLWSYLLNLFK 908

Query: 174 SLYFSGCNEPPASASWHLHLPFNLL-GKSSCPVALMLPSL 212
           S   S   E  + + W+ H+P  ++ G    P  +  PS+
Sbjct: 909 SRTQSCEYEIDSDSLWYFHVPKVVIPGSGGIPKWISHPSM 948



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 73/133 (54%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I+EL  +I  L  L +L L  CKNL  LP +I  LK L  LNL+G S    FPEI   
Sbjct: 674 TAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMED 733

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L E+ L  T I  LP SIE L G     LK+C+NL +LP +I  L  LR +    CS
Sbjct: 734 MEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCS 793

Query: 788 KLKNVTETLGKVE 800
           KL N+ + L  ++
Sbjct: 794 KLHNLPDNLRSLQ 806



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 9/158 (5%)

Query: 652 EEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           E   +FP+I + +        D + I+E+  +IE L  L  LTL+ C+N ++ P     L
Sbjct: 582 ERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNL 641

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           ++L  +N +  +  +E PEI  +   L ++ L  TAI+ LP SI  L+     NL++CKN
Sbjct: 642 RHLRVIN-ANRTDIKELPEI-HNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKN 699

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L+SLP++I GL+SL ++  +GCS L    E +  +E L
Sbjct: 700 LRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMEDMEDL 737



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 12/161 (7%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEAD--------EFPDIVQVLSDGTDIRELSLAIELL 680
           ++ G    R +  ++P    RLW+  D        E  + V+V+S   D+   S  +++L
Sbjct: 491 QQMGWTIDREKHLKDPSKWIRLWDPDDISKAFSAQEGMEQVEVIS--YDLSR-SKEMQIL 547

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
             L  + L+  + L ++P  +S++  L  LNL    + ++FPEI  +  +L  +HL+ + 
Sbjct: 548 GNLKIIDLSRSRLLTKMPE-LSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHLDCSG 606

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           I+ +P+SIE L       L  C+N    P     LR LR++
Sbjct: 607 IQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVI 647


>gi|110741819|dbj|BAE98852.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 703

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 209/369 (56%), Gaps = 29/369 (7%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+ E+PSSI  L  L+ L L  C +L  LP +I +L  L+ L+LSGCS L + P  + +
Sbjct: 246 SSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGN 305

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           + +L  L L + +S+ E+PSSI  L  L+ LYL+EC +LV LPSSI  L +LK L+LSGC
Sbjct: 306 LINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGC 365

Query: 134 CKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCN---EPPASAS 188
             L  +P ++G + +L+ L++SG +  +  P+S   L  NL+ L  SGC+   E P+S  
Sbjct: 366 SSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNL--NLKKLDLSGCSSLVELPSSIG 423

Query: 189 WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
             ++L    L  S C   + LP S+  + +L +L LS+C      +PS I NL +L+ELY
Sbjct: 424 NLINLKK--LDLSGCSSLVELPLSIGNLINLQELYLSECS-SLVELPSSIGNLINLQELY 480

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
           L+  ++ V LP+SI  L+NL++L+L  C +L SLPQ+P +L  + A  C SL TL  +  
Sbjct: 481 LSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACSFP 540

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
              +    +  ID  KL  K        R+ +   + S+       + PG ++P +F Y+
Sbjct: 541 ---NPQVWLKFIDCWKLNEKG-------RDIIVQTSTSN-----YTMLPGREVPAFFTYR 585

Query: 367 -NEGSSITV 374
              G S+ V
Sbjct: 586 ATTGGSLAV 594



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 13/299 (4%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D +S+ E+PSSI   T ++ L ++GC +L  LP +I +L  L  L+L GCS L + P  +
Sbjct: 28  DCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSI 87

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            ++ +L +L L G +S+ E+PSSI  L  LE  Y + C +L+ LPSSI  L SLK L L 
Sbjct: 88  GNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYLK 147

Query: 132 GCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASA 187
               L  +P ++G + +L+ L++SG +++    SSI  + NL+ L  SGC+   E P S 
Sbjct: 148 RISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSI 207

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
              ++L    L  S C   + LPS  G + +L  L+LS+C      +PS I NL +L+EL
Sbjct: 208 GNLINL--QELYLSECSSLVELPSSIGNLINLKTLNLSECS-SLVELPSSIGNLINLQEL 264

Query: 247 YLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP---NLQFVRANGCSSLVTL 301
           YL+  ++ V LP+SI  L+NL++L+L  C  L  LP       NL+ +  + CSSLV L
Sbjct: 265 YLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVEL 323



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 138/270 (51%), Gaps = 32/270 (11%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           S LK+ P +  ++  L  +  D +S+ E+PSSI     ++ L +  C +L++LPSSI  L
Sbjct: 7   SHLKELPNLSTAINLLEMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNL 66

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN 181
            +L  L+L GC  L  +P ++G + +L  LD+ G +++    SSI  + NL + YF GC+
Sbjct: 67  ITLPRLDLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCS 126

Query: 182 ---EPPASASWHLHLPFNLLGK----------------------SSCPVALMLPSLTG-V 215
              E P+S    + L    L +                      S C   + LPS  G +
Sbjct: 127 SLLELPSSIGNLISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNL 186

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDC 274
            +L KLDLS C      +P  I NL +L+ELYL+  ++ V LP+SI  L+NL+ L L +C
Sbjct: 187 INLKKLDLSGCS-SLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSEC 245

Query: 275 KRLQSLPQIPP---NLQFVRANGCSSLVTL 301
             L  LP       NLQ +  + CSSLV L
Sbjct: 246 SSLVELPSSIGNLINLQELYLSECSSLVEL 275



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 13/162 (8%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E      +++ +    LS+ + + EL  +I  L  L +L L+GC +L  LP +I 
Sbjct: 245 CSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIG 304

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS---- 757
            L  L TLNLS  S   E P    +   L E++L E +++  LP+SI    GN+++    
Sbjct: 305 NLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI----GNLINLKKL 360

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           +L  C +L  LP +I  L +L+ +  SGCS L  +  ++G +
Sbjct: 361 DLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNL 402



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 13/166 (7%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E      +++ +    LS  + + EL L+I  L  L +L L+ C +L  LP +I 
Sbjct: 173 CSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIG 232

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS---- 757
            L  L TLNLS  S   E P    +   L E++L E +++  LP+SI    GN+++    
Sbjct: 233 NLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSI----GNLINLKKL 288

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +L  C +L  LP +I  L +L+ +  S CS L  +  ++G + +L+
Sbjct: 289 DLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQ 334



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 9/120 (7%)

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPAS 747
           +GC +L  LP +I  L  L  L+LSG S   E P    +   L E++L E +++  LP+S
Sbjct: 171 SGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSS 230

Query: 748 IELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           I    GN+++    NL +C +L  LPS+I  L +L+ +Y S CS L  +  ++G + +L+
Sbjct: 231 I----GNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLK 286



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 18/154 (11%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGT 739
             L +L L+GC +L  LP +I  L  L  L+LSG S   E P    +   L E++L E +
Sbjct: 402 LNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECS 461

Query: 740 AIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE- 794
           ++  LP+SI    GN+++     L +C +L  LPS+I  L +L+ +  + C+KL ++ + 
Sbjct: 462 SLVELPSSI----GNLINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCTKLVSLPQL 517

Query: 795 -------TLGKVESLEVRLSSWNRPKMQNDF-DC 820
                       ESLE    S+  P++   F DC
Sbjct: 518 PDSLSVLVAESCESLETLACSFPNPQVWLKFIDC 551



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 11/142 (7%)

Query: 662 QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREF 721
            VLSD + + EL  +I     +  L + GC +L +LP +I  L  L  L+L G S   E 
Sbjct: 24  MVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVEL 83

Query: 722 PEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK-----DCKNLKSLPSTINGL 775
           P    +   L  + L G +++  LP+SI    GN++ NL+      C +L  LPS+I  L
Sbjct: 84  PSSIGNLINLPRLDLMGCSSLVELPSSI----GNLI-NLEAFYFHGCSSLLELPSSIGNL 138

Query: 776 RSLRMMYPSGCSKLKNVTETLG 797
            SL+++Y    S L  +  ++G
Sbjct: 139 ISLKILYLKRISSLVEIPSSIG 160



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 13/141 (9%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           ++  LS AI LL    ++ L+ C +L  LP +I     + +L++ G S   + P    + 
Sbjct: 11  ELPNLSTAINLL----EMVLSDCSSLIELPSSIGNATNIKSLDIQGCSSLLKLPSSIGNL 66

Query: 729 DQLLEIHLEG-TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYP 783
             L  + L G +++  LP+SI    GN+++    +L  C +L  LPS+I  L +L   Y 
Sbjct: 67  ITLPRLDLMGCSSLVELPSSI----GNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYF 122

Query: 784 SGCSKLKNVTETLGKVESLEV 804
            GCS L  +  ++G + SL++
Sbjct: 123 HGCSSLLELPSSIGNLISLKI 143



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + + EL  +I  L  L +L L GC +L  LP +I  L  L      G S   E P    +
Sbjct: 78  SSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNLINLEAFYFHGCSSLLELPSSIGN 137

Query: 728 RDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              L  ++L+  +++  +P+SI  L    L NL  C +L  LPS+I  L +L+ +  SGC
Sbjct: 138 LISLKILYLKRISSLVEIPSSIGNLINLKLLNLSGCSSLVELPSSIGNLINLKKLDLSGC 197

Query: 787 SKLKNVTETLGKVESLE 803
           S L  +  ++G + +L+
Sbjct: 198 SSLVELPLSIGNLINLQ 214


>gi|297741888|emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/289 (39%), Positives = 149/289 (51%), Gaps = 50/289 (17%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP  IE    L+ L L+ C+NL+SLP +I   K L TL  SGCS+L+ FP+I+ 
Sbjct: 920  GSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 978

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KLYL+GT+I E+PSSI+ L GL+ L L  CKNLV LP SI  L S KTL +S C
Sbjct: 979  DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1038

Query: 134  CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
                 +PD LG+++SLE L V    ++     S+  + +LR+L   GCN           
Sbjct: 1039 PNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTLKLQGCN----------- 1087

Query: 193  LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                                               L E   PS+I  L SL  L L  N+
Sbjct: 1088 -----------------------------------LRE--FPSEIYYLSSLVTLSLGGNH 1110

Query: 253  FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            F  +P  IS L NLE L L  CK LQ +P++P  L  + A+ C+SL  L
Sbjct: 1111 FSRIPDGISQLYNLENLYLGHCKMLQHIPELPSGLFCLDAHHCTSLENL 1159



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 192/461 (41%), Gaps = 105/461 (22%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL  LP  I   K L+TL+ +GC KLE  P+  G +  L  LD+SGT
Sbjct: 476 VPNLEILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGT 535

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI  +  L++L    C            L  + +    C ++          S
Sbjct: 536 AIMDLPSSITHLNGLQTLLLQEC------------LKLHQIPNHICHLS----------S 573

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L +LDL  C + E  IPSDI +L SL++L L + +F ++P +I+ L  LE L L  C  L
Sbjct: 574 LKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNL 633

Query: 278 QSLPQIPPNLQFVRANGC--SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR 335
           + +P++P  L+ + A+G   +S   LF  L      ++++NC    + L++   + S  R
Sbjct: 634 EQIPELPSRLRLLDAHGSNRTSSRALFLPL------HSLVNCFSWAQGLKRTSFSDSSYR 687

Query: 336 EYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
                      G    IV P +  IP+W M + +        P   +  N+ +GFA+CCV
Sbjct: 688 -----------GKGTCIVLPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCV 736

Query: 395 F--------QVPKHSTG----------------------------------TYLFHSYPA 412
           +         +P+  +                                       H++P 
Sbjct: 737 YVPFAYESEDIPEKESAHGSKNESANKSEDESAHTWENETDDKSVAESFRKNEHKHTHPC 796

Query: 413 HELECSMDGSGEGHYIYFRGKF--------------GHVVSDHLWLLFLPRHGHNWQF-- 456
             L C +D +G+G  +  R  F                 VS   W++  P+     +F  
Sbjct: 797 -RLSCCLDVAGDGVELVDRSFFQSNCFCYKKDKDEDNESVSGQTWVICYPKAVIPERFCS 855

Query: 457 -ESNLIRLSFRSI---SDPTWKVKRCGFHPIYMHEVEEFDE 493
            +   I  SF      S+   KVK CG   IY  ++++  E
Sbjct: 856 DQRTFIGFSFFDFYINSEKVLKVKECGVRLIYSQDLQQSHE 896



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 1/153 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+LTL+GC NL  LP  I   K L+TL  +GCSKL++FP+I   M +L  L L GT+I 
Sbjct: 479 LEILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIM 538

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVES 148
           ++PSSI  L GL+ L L EC  L ++P+ I  L SLK L+L  C  +E  +P  +  + S
Sbjct: 539 DLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSS 598

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L++L++         ++I  +  L  L  S CN
Sbjct: 599 LQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCN 631



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ + IE    L  L L  C+NL  LP +I   K L+TL+ SG S+   FPEI  
Sbjct: 920  GSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 978

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L +++L GTAI+ +P+SI+ L G     L++CKNL +LP +I  L S + +  S C
Sbjct: 979  DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1038

Query: 787  SKLKNVTETLGKVESLE 803
                 + + LG+++SLE
Sbjct: 1039 PNFNKLPDNLGRLQSLE 1055



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 24/180 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  LYL+GT+I E+PSSI+ L GL+ L L+ CKNL +LP +I +L   +TL +S
Sbjct: 977  LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1036

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             C    K P  +  ++ L  L+     +  + S    LP                  S++
Sbjct: 1037 RCPNFNKLPDNLGRLQSLEYLF-----VGHLDSMNFQLP------------------SLS 1073

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            GL SL+TL L G C L   P  +  + SL  L + G    R    I  + NL +LY   C
Sbjct: 1074 GLCSLRTLKLQG-CNLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLENLYLGHC 1132



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 11/154 (7%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLE LPR I   K+L TL+ +G SK   FPEI     +L  + L GTAI  LP
Sbjct: 482 LTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLP 541

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
           +SI  L+G     L++C  L  +P+ I  L SL+ +    C    N+ E  G + S    
Sbjct: 542 SSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHC----NIME--GGIPSDICH 595

Query: 806 LSSWNRPKM-QNDFDCVEQSAVETVTKLAKAELL 838
           LSS  +  + Q  F     S   T+ +L++ E+L
Sbjct: 596 LSSLQKLNLEQGHF----SSIPTTINQLSRLEVL 625



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             M++L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P  I  L  L+ L+L  
Sbjct: 522 GDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGH 581

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 582 CNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 637



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 38/180 (21%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I+Q +        +GT I+E+  +I+ L GL  L L  CKNL  LP 
Sbjct: 967  CSQL----ESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPE 1022

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLE-------------------------I 734
            +I  L    TL +S    F + P+    R Q LE                         +
Sbjct: 1023 SICNLTSFKTLVVSRCPNFNKLPD-NLGRLQSLEYLFVGHLDSMNFQLPSLSGLCSLRTL 1081

Query: 735  HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             L+G  +R  P+ I  LS  +  +L    +   +P  I+ L +L  +Y   C  L+++ E
Sbjct: 1082 KLQGCNLREFPSEIYYLSSLVTLSLGG-NHFSRIPDGISQLYNLENLYLGHCKMLQHIPE 1140


>gi|297734799|emb|CBI17033.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 201/431 (46%), Gaps = 29/431 (6%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +M  L  ++LD + I E+PSSIE L  LE LTL  C+N    P    +L+ LR +  +  
Sbjct: 30  NMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVIN-ANR 88

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           + +K+ P+I  +M  L+KL+L  T+I E+P SI  L  LE L L  CKNL  LP+SI GL
Sbjct: 89  TDIKELPEI-HNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGL 147

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           KSL  LNL+GC  L   P+ +  +E L EL +S T I     SI  +K L  L    C  
Sbjct: 148 KSLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCEN 207

Query: 183 ---PPASASWHLHLPFNLLGKSSCPVALMLPS--LTGVCSLTKLDLSDCGLGEAAIPSDI 237
               P S     HL    L   +C     LP    +    L +LDL+ C L + AIPSD+
Sbjct: 208 LVTLPDSIGNLTHL--RSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDL 265

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             L  L+ L ++      +P +I  L NL  L +  C+ L+ +P++P  L+ + A GC  
Sbjct: 266 WCLSLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPH 325

Query: 298 LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP---GHKLSIVF 354
           L TL        S   ++N   S               +  E +  SD     H   +V 
Sbjct: 326 LGTLSTPSSPLWS--YLLNLFKSRT-------------QSCEYEIDSDSLWYFHVPKVVI 370

Query: 355 PGS-QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           PGS  IPKW  + + G    +  P   Y  N  +GFA+     VP     ++    +   
Sbjct: 371 PGSGGIPKWISHPSMGRQAIIELPKNRYEDNNFLGFAV-FFHHVPLDDFWSHWHRRFLQF 429

Query: 414 ELECSMDGSGE 424
           EL  S D   E
Sbjct: 430 ELRISHDDQSE 440



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 54/323 (16%)

Query: 48  ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
           +SS+  L  L L  C +LKKFP+I  +M  L +++LD + I E+PSSIE LP LE L L+
Sbjct: 4   LSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLH 63

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI- 166
            C+N  + P +   L+ L+ +N +    ++ +P+ +  + SL +L +  TAI+    SI 
Sbjct: 64  YCRNFDKFPDNFGNLRHLRVIN-ANRTDIKELPE-IHNMGSLTKLFLIETAIKELPRSIG 121

Query: 167 ----------FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
                        KNLRSL  S C                                 G+ 
Sbjct: 122 HLTELEELNLENCKNLRSLPNSIC---------------------------------GLK 148

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           SL  L+L+ C     A P  ++++  L+EL L++     LP SI  L  LE LEL++C+ 
Sbjct: 149 SLGVLNLNGCS-NLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCEN 207

Query: 277 LQSLPQIPPNLQFVRA---NGCSSLVTL---FGALKLCRSKYTIINCIDSLKLLRKNGLA 330
           L +LP    NL  +R+     CS L  L     +L+ C  +  +  C      +  +   
Sbjct: 208 LVTLPDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWC 267

Query: 331 ISMLREYLELQAVSDPGHKLSIV 353
           +S+LR +L++  +  P    +I+
Sbjct: 268 LSLLR-FLDVSEIPIPCIPTNII 289



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 119/219 (54%), Gaps = 8/219 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+DL +L L  T ITE+P SIE L GLE L LK C+NL +LP +I +L  LR+L + 
Sbjct: 168 MEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVR 227

Query: 61  GCSKLKKFPQIVASME-DLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
            CSKL   P  + S++  L +L L G ++ +  +PS +  L  L  L ++E   +  +P+
Sbjct: 228 NCSKLHNLPDNLRSLQWCLRRLDLAGCNLMKGAIPSDLWCLSLLRFLDVSEIP-IPCIPT 286

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSI--FLMKNLRS 174
           +I  L +L+TL ++ C  LE +P+   ++E LE         +  P+S +  +L+   +S
Sbjct: 287 NIIQLSNLRTLRMNHCQMLEEIPELPSRLEILEAQGCPHLGTLSTPSSPLWSYLLNLFKS 346

Query: 175 LYFSGCNEPPASASWHLHLPFNLL-GKSSCPVALMLPSL 212
              S   E  + + W+ H+P  ++ G    P  +  PS+
Sbjct: 347 RTQSCEYEIDSDSLWYFHVPKVVIPGSGGIPKWISHPSM 385



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 73/133 (54%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I+EL  +I  L  L +L L  CKNL  LP +I  LK L  LNL+G S    FPEI   
Sbjct: 111 TAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMED 170

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L E+ L  T I  LP SIE L G     LK+C+NL +LP +I  L  LR +    CS
Sbjct: 171 MEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENLVTLPDSIGNLTHLRSLCVRNCS 230

Query: 788 KLKNVTETLGKVE 800
           KL N+ + L  ++
Sbjct: 231 KLHNLPDNLRSLQ 243



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 9/158 (5%)

Query: 652 EEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           E   +FP+I +       V  D + I+E+  +IE L  L  LTL+ C+N ++ P     L
Sbjct: 19  ERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNL 78

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           ++L  +N +  +  +E PEI  +   L ++ L  TAI+ LP SI  L+     NL++CKN
Sbjct: 79  RHLRVIN-ANRTDIKELPEI-HNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKN 136

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L+SLP++I GL+SL ++  +GCS L    E +  +E L
Sbjct: 137 LRSLPNSICGLKSLGVLNLNGCSNLVAFPEIMEDMEDL 174



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%)

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
           +S++  L  LNL    + ++FPEI  +  +L  +HL+ + I+ +P+SIE L       L 
Sbjct: 4   LSSMPNLEELNLVCCERLKKFPEIRENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLH 63

Query: 761 DCKNLKSLPSTINGLRSLRMM 781
            C+N    P     LR LR++
Sbjct: 64  YCRNFDKFPDNFGNLRHLRVI 84


>gi|357507449|ref|XP_003624013.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355499028|gb|AES80231.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 520

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/310 (38%), Positives = 169/310 (54%), Gaps = 22/310 (7%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G   +TEV  S+     + L+ L+ CK+L SLP  +  +  L  L L
Sbjct: 84  FSGVPNLEKLILKGCDGLTEVHPSLLHHKKVVLMNLEDCKSLKSLPGKLE-MSSLEKLIL 142

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGC + K  P+   SME+LS L L+G +I  +PSS+  L GL  L L  CK+LV LP +I
Sbjct: 143 SGCCEFKILPEFGESMENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTI 202

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           + L SL  LN+SGC +L  +PD L +++ L+EL  + TAI    SSIF + NL+S+   G
Sbjct: 203 HRLNSLIILNISGCSRLCRLPDGLKEIKCLKELHANDTAIDELPSSIFYLDNLKSIIIFG 262

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             +    AS     P +L           LPSL  +      +LS C L E +IP  + +
Sbjct: 263 SQQ----ASTGFRFPTSLWN---------LPSLRYI------NLSYCNLSEESIPDYLRH 303

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL- 298
           L SLK L L  NNFV +P++IS L  L  L L  C++LQ LP+I  ++  + A+ C SL 
Sbjct: 304 LSSLKSLDLTGNNFVYIPSTISKLPKLHFLYLNCCQKLQLLPEISSSMTELDASNCDSLE 363

Query: 299 VTLFGALKLC 308
            T F   K C
Sbjct: 364 TTKFNPAKPC 373



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDGTD-IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G D + E+  ++     +V + L  CK+L+ LP  +  +  L  L LSG  
Sbjct: 88  PNLEKLILKGCDGLTEVHPSLLHHKKVVLMNLEDCKSLKSLPGKLE-MSSLEKLILSGCC 146

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           +F+  PE   S + L  + LEG AIR LP+S+  L G    NLK+CK+L  LP TI+ L 
Sbjct: 147 EFKILPEFGESMENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTIHRLN 206

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL ++  SGCS+L  + + L +++ L+
Sbjct: 207 SLIILNISGCSRLCRLPDGLKEIKCLK 233



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 7/139 (5%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EF + ++ LS    +G  IR L  ++  L GL  L L  CK+L  LP TI  L  L  LN
Sbjct: 153 EFGESMENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTIHRLNSLIILN 212

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI---ELLSGNILSNLKDCKNLKSL 768
           +SG S+    P+       L E+H   TAI  LP+SI   + L   I+   +        
Sbjct: 213 ISGCSRLCRLPDGLKEIKCLKELHANDTAIDELPSSIFYLDNLKSIIIFGSQQASTGFRF 272

Query: 769 PSTINGLRSLRMMYPSGCS 787
           P+++  L SLR +  S C+
Sbjct: 273 PTSLWNLPSLRYINLSYCN 291


>gi|104646999|gb|ABF74123.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNIVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 24/187 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLFRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLE 803
             + SLE
Sbjct: 206 QNLTSLE 212



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 38/235 (16%)

Query: 78  LSKLYLDGTSIAEVPSSI--ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           L  L  DG  +  +PS    E L  +EL   N   NL +L   I  L++LK ++L  C  
Sbjct: 4   LRYLRWDGYPLKTMPSRFCPEFL--VELCMSN--SNLEKLWDGIQPLRNLKKMDLFRCKY 59

Query: 136 LENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           L  VPD L K  +LEEL++S   ++   T SI  ++ L   Y + C              
Sbjct: 60  LVEVPD-LSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-------------- 104

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
              +     P+ + L SL  V       +S C    +++    +   + + LYL+     
Sbjct: 105 ---IQLKDIPIGITLKSLETV------GMSGC----SSLKHFPEISWNTRRLYLSSTKIE 151

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALK 306
            LP+SIS L  L +L++ DC+RL++LP    +L  +++   +GC  L  L   L+
Sbjct: 152 ELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GNI++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNIVA 326



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|297807789|ref|XP_002871778.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317615|gb|EFH48037.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1281

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 207/427 (48%), Gaps = 63/427 (14%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D   +  +PS +  L  L+ L L GCK L +LP T+ +L  L TLE+SGC  + +FP++ 
Sbjct: 750  DCQRLRTLPSYLRHLVSLKSLNLDGCKRLENLPGTLQNLTSLETLEVSGCLNVNEFPRVA 809

Query: 73   ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             ++E    L +  TSI E+P+ I  L  L  L ++E K L  LP SI+ L+SL+ L LSG
Sbjct: 810  TNIE---VLRISETSIEEIPARICNLSQLRSLDISENKRLKSLPLSISKLRSLEKLKLSG 866

Query: 133  CCKLEN------------------------VPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
            C  LE+                        +P+ +G + +LE L  S T IRR   SI  
Sbjct: 867  CSVLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTVIRRAPRSIAR 926

Query: 169  MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
            +  L+ L               L+ P  LL         + P L     L  L LS+  +
Sbjct: 927  LTRLQVLAIGN----------SLYTPEGLLHS-------LCPPLARFDDLRALSLSNMNM 969

Query: 229  GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP-QIPPNL 287
             E  IP+ I NL +L E+ L+ N+F  +PASI  L  L  L L +C+RLQ+LP ++P  L
Sbjct: 970  VE--IPNSIGNLWNLLEIDLSGNSFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRGL 1027

Query: 288  QFVRANGCSSLVTLFGAL-KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP 346
             ++  + C+SLV++ G   + C  ++   NC       + +  A  ++   ++L++ + P
Sbjct: 1028 LYIYIHNCTSLVSISGCFNQYCLRQFVASNC------YKLDQAAQILIHCNMKLES-AKP 1080

Query: 347  GHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYL 406
             H     FPGS IP  F +Q  G S+ +  P    + + ++GF+ C +  V     G Y 
Sbjct: 1081 EHS---YFPGSDIPSCFNHQVMGPSLNIQLPQS-ESSSDILGFSACIMIGV----DGQYP 1132

Query: 407  FHSYPAH 413
             ++   H
Sbjct: 1133 MNNLKIH 1139



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 139/265 (52%), Gaps = 25/265 (9%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    +  C  L ++P+ I+ LK L T+ +SGCS L  FP+I  + 
Sbjct: 662 SLVEVTPSIKNLKGLSCFYMTNCIQLKNIPIGIT-LKSLETVRMSGCSSLMHFPEISWNT 720

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 721 R---RLYLSSTKIEELPSSISRLSCLVELDMSDCQRLRTLPSYLRHLVSLKSLNLDGCKR 777

Query: 136 LENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPA-----S 186
           LEN+P TL  + SLE L+VSG        R  ++I +++    +  +   E PA     S
Sbjct: 778 LENLPGTLQNLTSLETLEVSGCLNVNEFPRVATNIEVLR----ISETSIEEIPARICNLS 833

Query: 187 ASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
               L +  N   KS       LP S++ + SL KL LS C + E+  P     +  L+ 
Sbjct: 834 QLRSLDISENKRLKS-------LPLSISKLRSLEKLKLSGCSVLESFPPEICQTMSCLRW 886

Query: 246 LYLNRNNFVTLPASISGLLNLEELE 270
             L+R +   LP +I  L+ LE L+
Sbjct: 887 FDLDRTSIKELPENIGNLVALEVLQ 911



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 19/159 (11%)

Query: 656 EFPDIVQVLSDGTDIRELSLA-----------IELLFGLVQLTLNGCKNLERLPRTISAL 704
           E PD    LS  T++ EL+L+           I+ L GL    +  C  L+ +P  I+ L
Sbjct: 642 EIPD----LSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYMTNCIQLKNIPIGIT-L 696

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           K L T+ +SG S    FPEI+ +  +L   +L  T I  LP+SI  LS  +  ++ DC+ 
Sbjct: 697 KSLETVRMSGCSSLMHFPEISWNTRRL---YLSSTKIEELPSSISRLSCLVELDMSDCQR 753

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           L++LPS +  L SL+ +   GC +L+N+  TL  + SLE
Sbjct: 754 LRTLPSYLRHLVSLKSLNLDGCKRLENLPGTLQNLTSLE 792



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GCK LE LP T+  L  L TL +SG     EFP 
Sbjct: 748 MSDCQRLRTLPSYLRHLVSLKSLNLDGCKRLENLPGTLQNLTSLETLEVSGCLNVNEFPR 807

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           + ++ + L    +  T+I  +PA I  LS     ++ + K LKSLP +I+ LRSL  +  
Sbjct: 808 VATNIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLKSLPLSISKLRSLEKLKL 864

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 865 SGCSVLES 872



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 38/235 (16%)

Query: 78  LSKLYLDGTSIAEVPSSI--ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           L  L  DG  +  +PS    E L  +EL   N   +L +L   I  L +LK ++LS C  
Sbjct: 584 LRYLRWDGYPLKTMPSRFCPEFL--VELCMSN--SDLEKLWDGIQPLTNLKKMDLSRCKY 639

Query: 136 LENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           L  +PD L K  +LEEL++S   ++   T SI  +K L   Y + C              
Sbjct: 640 LVEIPD-LSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYMTNC-------------- 684

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
              +   + P+ + L SL  V       +S C    +++    +   + + LYL+     
Sbjct: 685 ---IQLKNIPIGITLKSLETV------RMSGC----SSLMHFPEISWNTRRLYLSSTKIE 731

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALK 306
            LP+SIS L  L EL++ DC+RL++LP    +L  +++   +GC  L  L G L+
Sbjct: 732 ELPSSISRLSCLVELDMSDCQRLRTLPSYLRHLVSLKSLNLDGCKRLENLPGTLQ 786



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L+ LP +IS L+ L  
Sbjct: 802 VNEFPRVATNIEVLRISETSIEEIPARICNLSQLRSLDISENKRLKSLPLSISKLRSLEK 861

Query: 710 LNLSGLSKFREF-PEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    F PEI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 862 LKLSGCSVLESFPPEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 906



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 38/171 (22%)

Query: 658  PDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
            P+I Q +S       D T I+EL   I  L  L  L  +    + R PR+I+ L  L  L
Sbjct: 875  PEICQTMSCLRWFDLDRTSIKELPENIGNLVALEVLQASRTV-IRRAPRSIARLTRLQVL 933

Query: 711  NLSG---------------LSKFR-------------EFPEITSSRDQLLEIHLEGTAIR 742
             +                 L++F              E P    +   LLEI L G +  
Sbjct: 934  AIGNSLYTPEGLLHSLCPPLARFDDLRALSLSNMNMVEIPNSIGNLWNLLEIDLSGNSFE 993

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
             +PASI+ L+     NL +C+ L++LP  +   R L  +Y   C+ L +++
Sbjct: 994  FIPASIKRLTRLNRLNLNNCQRLQALPDELP--RGLLYIYIHNCTSLVSIS 1042


>gi|224112118|ref|XP_002332830.1| predicted protein [Populus trichocarpa]
 gi|222870202|gb|EEF07333.1| predicted protein [Populus trichocarpa]
          Length = 330

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/289 (40%), Positives = 158/289 (54%), Gaps = 47/289 (16%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G  S++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 87  LTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNLE-MESLKFFTL 145

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+ FP IV +M  L KL LD T IAE+  SI  + GLE+L +N CK L  +  SI
Sbjct: 146 DGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSI 205

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+N+P  L KVESLEE DVSGT+IR+  +SIFL+KNL  L   G
Sbjct: 206 ECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDG 265

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                                      L  C L   A+P DI  
Sbjct: 266 -------------------------------------------LRACNL--RALPEDIGC 280

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           L SLK L L+RNNFV+LP SI+ L  LE+L LEDC  L+SL ++P  +Q
Sbjct: 281 LSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLEVPSKVQ 329



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 25/173 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L  L LD T I E+  SI  + GLE+L++  CK L S+  +I  LK L+ L+LS
Sbjct: 158 VGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLS 217

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK---------- 110
           GCS+LK  P  +  +E L +  + GTSI ++P+SI LL  L +L L+  +          
Sbjct: 218 GCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSLDGLRACNLRALPED 277

Query: 111 ---------------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
                          N V LP SIN L  L+ L L  C  LE++ +   KV++
Sbjct: 278 IGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLEVPSKVQT 330



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 88/187 (47%), Gaps = 36/187 (19%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FPDIV       ++  D T I ELS +I  + GL  L++N CK LE + R
Sbjct: 148 CSKL----ENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVLSMNNCKKLESISR 203

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI---L 756
           +I  LK L  L+LSG S+ +  P      + L E  + GT+IR LPASI LL       L
Sbjct: 204 SIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPASIFLLKNLAVLSL 263

Query: 757 SNLKDC----------------------KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             L+ C                       N  SLP +IN L  L  +    C+ L+++ E
Sbjct: 264 DGLRACNLRALPEDIGCLSSLKSLDLSRNNFVSLPRSINQLSGLEKLVLEDCTMLESLLE 323

Query: 795 TLGKVES 801
              KV++
Sbjct: 324 VPSKVQT 330



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           + L  C+++  LP  +  ++ L    L G SK   FP+I  + + L+++ L+ T I  L 
Sbjct: 120 VNLINCRSIRILPSNLE-MESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIAELS 178

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            SI  + G  + ++ +CK L+S+  +I  L+SL+ +  SGCS+LKN+   L KVESLE
Sbjct: 179 PSIRHMIGLEVLSMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLE 236


>gi|51477389|gb|AAU04762.1| MRGH21 [Cucumis melo]
          Length = 1020

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 183/320 (57%), Gaps = 14/320 (4%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L G   + ++  S+  L  L  L L+ CK L+++P  I  L+ L+ L LSGCS 
Sbjct: 670 NLERLVLSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNIC-LESLKILVLSGCSS 728

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L  FP+I ++M  L +L+L+ TSI  + SSI  L  L +L L  C NL++LPS+I  L S
Sbjct: 729 LTHFPKISSNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTS 788

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           LKTLNL+GC KL+++P++LG + SLE+LD++ T + +   S  L+  L  L   G +   
Sbjct: 789 LKTLNLNGCSKLDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGLSRKF 848

Query: 185 ASA---SWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
             +   +W+    F     S+    L + +  T  CSL  L+LSDC L +  +P+D+ +L
Sbjct: 849 LHSLFPTWNFTRKF-----SNYSQGLRVTNWFTFGCSLRILNLSDCNLWDGDLPNDLHSL 903

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            SL+ L+L++N+F  LP SI  L+NL +L L +C  L SLP++P +++ V A  C SL  
Sbjct: 904 ASLQILHLSKNHFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVRDVEARDCVSLRE 963

Query: 301 LFGALKLCRSK---YTIINC 317
            +   K   S     T I C
Sbjct: 964 YYNKEKQIPSSEMGMTFIRC 983



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 89/141 (63%), Gaps = 1/141 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VLS   ++ +L  ++  L  L+QL L  CK L  +P  I  L+ L  L LSG S    FP
Sbjct: 675 VLSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNI-CLESLKILVLSGCSSLTHFP 733

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +I+S+ + LLE+HLE T+I+ L +SI  L+  ++ NLK+C NL  LPSTI  L SL+ + 
Sbjct: 734 KISSNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLN 793

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            +GCSKL ++ E+LG + SLE
Sbjct: 794 LNGCSKLDSLPESLGNISSLE 814



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 28/204 (13%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           ++M  L +L+L+ TSI  + SSI  LT L +L LK C NL  LP TI SL  L+TL L+G
Sbjct: 737 SNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNG 796

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR------- 114
           CSKL   P+ + ++  L KL +  T + + P S +LL  LE+L    C+ L R       
Sbjct: 797 CSKLDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEIL---NCQGLSRKFLHSLF 853

Query: 115 --------LPSSINGLK---------SLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSG 156
                     +   GL+         SL+ LNLS C   + ++P+ L  + SL+ L +S 
Sbjct: 854 PTWNFTRKFSNYSQGLRVTNWFTFGCSLRILNLSDCNLWDGDLPNDLHSLASLQILHLSK 913

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGC 180
               +   SI  + NLR L+   C
Sbjct: 914 NHFTKLPESICHLVNLRDLFLVEC 937



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 45/85 (52%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I+ L  +I  L  LV L L  C NL +LP TI +L  L TLNL+G SK    PE   +
Sbjct: 750 TSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGN 809

Query: 728 RDQLLEIHLEGTAIRGLPASIELLS 752
              L ++ +  T +   P S +LL+
Sbjct: 810 ISSLEKLDITSTCVNQAPMSFQLLT 834



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 33/203 (16%)

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           SME L  + L  +          ++P LE L L+ C  L +L  S+  LK L  L+L  C
Sbjct: 644 SMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDLRNC 703

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASW 189
            KL N+P  +                         +++L+ L  SGC+     P  S++ 
Sbjct: 704 KKLTNIPFNI------------------------CLESLKILVLSGCSSLTHFPKISSNM 739

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
           +  L  +L       + ++  S+  + SL  L+L +C      +PS I +L SLK L LN
Sbjct: 740 NYLLELHL---EETSIKVLHSSIGHLTSLVVLNLKNCT-NLLKLPSTIGSLTSLKTLNLN 795

Query: 250 R-NNFVTLPASISGLLNLEELEL 271
             +   +LP S+  + +LE+L++
Sbjct: 796 GCSKLDSLPESLGNISSLEKLDI 818


>gi|298204612|emb|CBI23887.3| unnamed protein product [Vitis vinifera]
          Length = 1384

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 161/598 (26%), Positives = 242/598 (40%), Gaps = 157/598 (26%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK---------------------- 39
            A+MK L+DL L+ T+I E+P+ I     LE+L L  C                       
Sbjct: 744  ANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNG 803

Query: 40   -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
             ++  LP +I  L+ L  L+LS CSK +KFP+   +M+ L KL  +GTSI ++P SI  L
Sbjct: 804  TSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDL 863

Query: 99   PGLELLYLNECKNLVR-----------------------LPSSINGLKSLKTLNLSGCCK 135
              LE+L L+ C    +                       LP SI  L+SL+ L+LS C K
Sbjct: 864  ESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTAIKDLPDSIGDLESLEILDLSKCLK 923

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-----------NEPP 184
             E  P+  G ++SL++L +  TAI+    S+  +++L  L+ S C           N   
Sbjct: 924  FEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEILHLSECSKFEKFPEKGGNMKK 983

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
             S     H     +   +  +  +  S+  + SL  LDLS+C   E   P    N+ SLK
Sbjct: 984  ISGEGREHEKIKAVSLINTAIKDLPDSIGDLESLESLDLSECSKFEK-FPEKGGNMKSLK 1042

Query: 245  ELYLNRNNFVTLPASISGL-----LNLEELELED-------------------------- 273
            ELYL       LP SI GL     LNL+   ++D                          
Sbjct: 1043 ELYLINTAIKDLPDSIGGLESLKILNLKNTAIKDLPNISRLKFLKRLILCDRSDMWEGLI 1102

Query: 274  --------------CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCID 319
                          C+  + +P +P +L+ + A+ C+S   L G L LC           
Sbjct: 1103 SNQLCNLQKPNISQCEMARQIPVLPSSLEEIDAHHCTSKEDLSGLLWLCH---------- 1152

Query: 320  SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP-GSQIPKW-FMYQNEGSSITVTRP 377
                           R +L+  A      KLS   P  S I +W   YQN GS +T   P
Sbjct: 1153 ---------------RNWLKSTAEELKSWKLSARIPESSGIQEWRIRYQNLGSEVTAKLP 1197

Query: 378  SYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFR------ 431
               Y     +GF + CV+Q    ST            L+C ++  G G     R      
Sbjct: 1198 MNWYEDPDFLGFFVSCVYQPSHKST------------LKCELNLHGNGFEFKDRTWCDCW 1245

Query: 432  ----GKFGHVVSDHLWLLFLPRHGHNWQF-ESNLIRLSFRSISDPTWKVKRCGFHPIY 484
                G F  ++ D +W+ + P+     +  +S  I  SF+   +P   +K+CG + I+
Sbjct: 1246 CGSHGNFKELI-DQVWVWWYPKIAIPKELRKSTHINASFK---NPGINIKKCGINLIF 1299



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 157/324 (48%), Gaps = 40/324 (12%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L +L L G  S+  +  S+  L  L  L L+GC  L  LP +IS+L+ L  L+L
Sbjct: 622 FSSMPNLEELILKGCVSLINIDPSVGDLKKLTTLDLRGCVKLKGLPSSISNLEALECLDL 681

Query: 60  SGCSKLKKFPQ---IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-- 114
           + CS   KF +   I  +M  L+ LYL  T+I E+PSSI+ L  +E+L L++C    +  
Sbjct: 682 TRCSSFDKFAEIQGIQGNMSSLTHLYLRKTAIRELPSSID-LESVEILDLSDCSKFEKFP 740

Query: 115 ---------------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD 153
                                LP+ I   +SL+ L+LS C K E  P+  G ++SL++L 
Sbjct: 741 ENGANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGNMKSLKKLR 800

Query: 154 VSGTAIRRPTSSIFLMKNLRSLYFSGCN------EPPASASWHLHLPFNLLGKSSCPVAL 207
            +GT+I+    SI  +++L  L  S C+      E   +      L FN       P   
Sbjct: 801 FNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLP--- 857

Query: 208 MLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
              S+  + SL  LDLS C   E   P    N+ SLK+L+L       LP SI  L +LE
Sbjct: 858 --DSIGDLESLEILDLSYCSKFE-KFPEKGGNMKSLKKLHLKNTAIKDLPDSIGDLESLE 914

Query: 268 ELELEDCKRLQSLPQIPPNLQFVR 291
            L+L  C + +  P+   N++ ++
Sbjct: 915 ILDLSKCLKFEKFPEKGGNMKSLK 938



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 149/324 (45%), Gaps = 64/324 (19%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M  L+ LYL  T+I E+PSSI+L                         + +  L+LS 
Sbjct: 698 GNMSSLTHLYLRKTAIRELPSSIDL-------------------------ESVEILDLSD 732

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR------- 114
           CSK +KFP+  A+M+ L+ L L+ T+I E+P+ I     LE+L L+ C    +       
Sbjct: 733 CSKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGN 792

Query: 115 ----------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
                           LP SI  L+SL+ L+LS C K E  P+  G ++SL++L  +GT+
Sbjct: 793 MKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTS 852

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNE----PPASASW----HLHLPFNLLGKSSCPVALMLP 210
           I+    SI  +++L  L  S C++    P    +      LHL        +  +  +  
Sbjct: 853 IKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHL-------KNTAIKDLPD 905

Query: 211 SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELE 270
           S+  + SL  LDLS C L     P    N+ SLK+L L       LP S+  L +LE L 
Sbjct: 906 SIGDLESLEILDLSKC-LKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEILH 964

Query: 271 LEDCKRLQSLPQIPPNLQFVRANG 294
           L +C + +  P+   N++ +   G
Sbjct: 965 LSECSKFEKFPEKGGNMKKISGEG 988



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 50/250 (20%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           L+ L+ ++LS  +KL + P+  +                        +P LE L L  C 
Sbjct: 602 LQSLKVIDLSHSNKLVQMPEFSS------------------------MPNLEELILKGCV 637

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-FLM 169
           +L+ +  S+  LK L TL+L GC KL+ +P ++  +E+LE LD++  +     + I  + 
Sbjct: 638 SLINIDPSVGDLKKLTTLDLRGCVKLKGLPSSISNLEALECLDLTRCSSFDKFAEIQGIQ 697

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
            N+ SL              HL+L    + +        LPS   + S+  LDLSDC   
Sbjct: 698 GNMSSLT-------------HLYLRKTAIRE--------LPSSIDLESVEILDLSDCSKF 736

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN--- 286
           E   P +  N+ SL +L L       LP  I+   +LE L+L  C + +  P+   N   
Sbjct: 737 E-KFPENGANMKSLNDLRLENTAIKELPTGIANWESLEILDLSYCSKFEKFPEKGGNMKS 795

Query: 287 LQFVRANGCS 296
           L+ +R NG S
Sbjct: 796 LKKLRFNGTS 805



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L  NG  +++ LP +I  L+ L  L+LS  SKF +FPE   +   L ++HL+ TAI+
Sbjct: 843 LKKLRFNGT-SIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTAIK 901

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L  C   +  P     ++SL+ +     + +K++ +++G +ESL
Sbjct: 902 DLPDSIGDLESLEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTA-IKDLPDSVGDLESL 960

Query: 803 EV 804
           E+
Sbjct: 961 EI 962



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L  NG  +++ LP +I  L+ L  L+LS  SKF +FPE   +   L ++   GT+I+
Sbjct: 796 LKKLRFNGT-SIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIK 854

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L  C   +  P     ++SL+ ++    + +K++ +++G +ESL
Sbjct: 855 DLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTA-IKDLPDSIGDLESL 913

Query: 803 EV 804
           E+
Sbjct: 914 EI 915



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 70/147 (47%), Gaps = 27/147 (18%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS---SRDQLLEIHLEGT 739
           L  L L GC  L+ LP +IS L+ L  L+L+  S F +F EI     +   L  ++L  T
Sbjct: 652 LTTLDLRGCVKLKGLPSSISNLEALECLDLTRCSSFDKFAEIQGIQGNMSSLTHLYLRKT 711

Query: 740 AIRGLPASIELLSGNILSNLKDCKN-----------------------LKSLPSTINGLR 776
           AIR LP+SI+L S  IL +L DC                         +K LP+ I    
Sbjct: 712 AIRELPSSIDLESVEIL-DLSDCSKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWE 770

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL ++  S CSK +   E  G ++SL+
Sbjct: 771 SLEILDLSYCSKFEKFPEKGGNMKSLK 797



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP  I+  + L  L+LS  SKF +FPE   +   L ++   GT+I+ LP SI  L  
Sbjct: 759 IKELPTGIANWESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLES 818

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             + +L  C   +  P     ++SL+ +  +G S +K++ +++G +ESLE+
Sbjct: 819 LEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTS-IKDLPDSIGDLESLEI 868



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 2/111 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +  LP +I  L+ +  L+LS  SKF +FPE  ++   L ++ LE TAI+ LP  I     
Sbjct: 713 IRELPSSID-LESVEILDLSDCSKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWES 771

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             + +L  C   +  P     ++SL+ +  +G S +K++ +++G +ESLE+
Sbjct: 772 LEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTS-IKDLPDSIGDLESLEI 821



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 11/121 (9%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSS----------RDQLLEIHLEGTAIRG 743
            ++ LP ++  L+ L  L+LS  SKF +FPE   +           +++  + L  TAI+ 
Sbjct: 947  IKDLPDSVGDLESLEILHLSECSKFEKFPEKGGNMKKISGEGREHEKIKAVSLINTAIKD 1006

Query: 744  LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            LP SI  L      +L +C   +  P     ++SL+ +Y    + +K++ +++G +ESL+
Sbjct: 1007 LPDSIGDLESLESLDLSECSKFEKFPEKGGNMKSLKELYLINTA-IKDLPDSIGGLESLK 1065

Query: 804  V 804
            +
Sbjct: 1066 I 1066



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 2/88 (2%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L +L+LS  SKF +FPE   +   L E++L  TAI+ LP SI  L  
Sbjct: 1004 IKDLPDSIGDLESLESLDLSECSKFEKFPEKGGNMKSLKELYLINTAIKDLPDSIGGLES 1063

Query: 754  NILSNLKDCKNLKSLPSTINGLRSLRMM 781
              + NLK+   +K LP+ I+ L+ L+ +
Sbjct: 1064 LKILNLKNTA-IKDLPN-ISRLKFLKRL 1089



 Score = 46.2 bits (108), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 75/194 (38%), Gaps = 56/194 (28%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLER-----------------------LPRTIS 702
            +GT I++L  +I  L  L  L L+ C   E+                       LP +I 
Sbjct: 849  NGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLHLKNTAIKDLPDSIG 908

Query: 703  ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
             L+ L  L+LS   KF +FPE   +   L ++ L  TAI+ LP S+  L    + +L +C
Sbjct: 909  DLESLEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEILHLSEC 968

Query: 763  KN---------------------------------LKSLPSTINGLRSLRMMYPSGCSKL 789
                                               +K LP +I  L SL  +  S CSK 
Sbjct: 969  SKFEKFPEKGGNMKKISGEGREHEKIKAVSLINTAIKDLPDSIGDLESLESLDLSECSKF 1028

Query: 790  KNVTETLGKVESLE 803
            +   E  G ++SL+
Sbjct: 1029 EKFPEKGGNMKSLK 1042


>gi|104646987|gb|ABF74117.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSIRRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSIRRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLFRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSIRRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 38/235 (16%)

Query: 78  LSKLYLDGTSIAEVPSSI--ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           L  L  DG  +  +PS    E L  +EL   N   NL +L   I  L++LK ++L  C  
Sbjct: 4   LRYLRWDGYPLKTMPSRFCPEFL--VELCMSN--SNLEKLWDGIQPLRNLKKMDLFRCKY 59

Query: 136 LENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           L  VPD L K  +LEEL++S   ++   T SI  ++ L   Y + C              
Sbjct: 60  LVEVPD-LSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-------------- 104

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
              +     P+ + L SL  V       +S C    +++    +   + + LYL+     
Sbjct: 105 ---IQLKDIPIGITLKSLETV------GMSGC----SSLKHFPEISWNTRRLYLSSTKIE 151

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALK 306
            LP+SI  L  L +L++ DC+RL++LP    +L  +++   +GC  L  L   L+
Sbjct: 152 ELPSSIRRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104646939|gb|ABF74093.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFFPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104647019|gb|ABF74133.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647021|gb|ABF74134.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLSRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLSRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104646997|gb|ABF74122.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I  LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGII-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 24/187 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I  LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGI-ILKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLE 803
             + SLE
Sbjct: 206 QNLTSLE 212



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 126/293 (43%), Gaps = 64/293 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFFPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKV-ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           K L    L+ C +L+++P  +G + +SLE + +SG +  +    I    N R LY S   
Sbjct: 94  KGLSCFYLTNCIQLKDIP--IGIILKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTK 149

Query: 182 --EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             E P+S S           + SC              L KLD+SDC      +PS + +
Sbjct: 150 IEELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGH 183

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           L SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 184 LVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104646973|gb|ABF74110.1| disease resistance protein [Arabidopsis thaliana]
          Length = 584

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104646925|gb|ABF74086.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646929|gb|ABF74088.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646935|gb|ABF74091.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646951|gb|ABF74099.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646959|gb|ABF74103.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646961|gb|ABF74104.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646983|gb|ABF74115.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646989|gb|ABF74118.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647017|gb|ABF74132.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647023|gb|ABF74135.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647027|gb|ABF74137.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647035|gb|ABF74141.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104646931|gb|ABF74089.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646933|gb|ABF74090.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCXRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C  L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCXRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC  L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCXRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCXRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCX-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104646937|gb|ABF74092.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646967|gb|ABF74107.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646995|gb|ABF74121.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647009|gb|ABF74128.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLFRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 38/235 (16%)

Query: 78  LSKLYLDGTSIAEVPSSI--ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           L  L  DG  +  +PS    E L  +EL   N   NL +L   I  L++LK ++L  C  
Sbjct: 4   LRYLRWDGYPLKTMPSRFCPEFL--VELCMSN--SNLEKLWDGIQPLRNLKKMDLFRCKY 59

Query: 136 LENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           L  VPD L K  +LEEL++S   ++   T SI  +K L   Y + C              
Sbjct: 60  LVEVPD-LSKATNLEELNLSYCQSLVEVTPSIKNLKGLSCFYLTNC-------------- 104

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
              +     P+ + L SL  V       +S C    +++    +   + + LYL+     
Sbjct: 105 ---IQLKDIPIGITLKSLETV------GMSGC----SSLKHFPEISWNTRRLYLSSTKIE 151

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALK 306
            LP+SIS L  L +L++ DC+RL++LP    +L  +++   +GC  L  L   L+
Sbjct: 152 ELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104646977|gb|ABF74112.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646979|gb|ABF74113.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646981|gb|ABF74114.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLFRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 38/235 (16%)

Query: 78  LSKLYLDGTSIAEVPSSI--ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           L  L  DG  +  +PS    E L  +EL   N   NL +L   I  L++LK ++L  C  
Sbjct: 4   LRYLRWDGYPLKTMPSRFCPEFL--VELCMSN--SNLEKLWDGIQPLRNLKKMDLFRCKY 59

Query: 136 LENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           L  VPD L K  +LEEL++S   ++   T SI  ++ L   Y + C              
Sbjct: 60  LVEVPD-LSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-------------- 104

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
              +     P+ + L SL  V       +S C    +++    +   + + LYL+     
Sbjct: 105 ---IQLKDIPIGITLKSLETV------GMSGC----SSLKHFPEISWNTRRLYLSSTKIE 151

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALK 306
            LP+SIS L  L +L++ DC+RL++LP    +L  +++   +GC  L  L   L+
Sbjct: 152 ELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|104647011|gb|ABF74129.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 211/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 24/187 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLFRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLRGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLE 803
             + SLE
Sbjct: 206 QNLTSLE 212



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 38/235 (16%)

Query: 78  LSKLYLDGTSIAEVPSSI--ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           L  L  DG  +  +PS    E L  +EL   N   NL +L   I  L++LK ++L  C  
Sbjct: 4   LRYLRWDGYPLKTMPSRFCPEFL--VELCMSN--SNLEKLWDGIQPLRNLKKMDLFRCKY 59

Query: 136 LENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           L  VPD L K  +LEEL++S   ++   T SI  ++ L   Y + C              
Sbjct: 60  LVEVPD-LSKATNLEELNLSYCQSLVEVTPSIKNLRGLSCFYLTNC-------------- 104

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
              +     P+ + L SL  V       +S C    +++    +   + + LYL+     
Sbjct: 105 ---IQLKDIPIGITLKSLETV------GMSGC----SSLKHFPEISWNTRRLYLSSTKIE 151

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALK 306
            LP+SIS L  L +L++ DC+RL++LP    +L  +++   +GC  L  L   L+
Sbjct: 152 ELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQ 206



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|51477388|gb|AAU04761.1| MRGH13 [Cucumis melo]
          Length = 1024

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/320 (37%), Positives = 183/320 (57%), Gaps = 14/320 (4%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L G   + ++  S+  L  L  L L+ CK L+++P  I  L+ L+ L LSGCS 
Sbjct: 670 NLERLVLSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNIC-LESLKILVLSGCSS 728

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L  FP+I ++M  L +L+L+ TSI  + SSI  L  L +L L  C NL++LPS+I  L S
Sbjct: 729 LTHFPKISSNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTS 788

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           LKTLNL+GC +L+++P++LG + SLE+LD++ T + +   S  L+  L  L   G +   
Sbjct: 789 LKTLNLNGCSELDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEILNCQGLSRKF 848

Query: 185 ASA---SWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
             +   +W+    F +  +      L + +  T  CSL  L+LSDC L +  +P+D+ +L
Sbjct: 849 LHSLFPTWNFTRKFTIYSQ-----GLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLRSL 903

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            SL+ L+L++N+F  LP SI  L+NL +L L +C  L SLP++P +++ V A  C SL  
Sbjct: 904 ASLQILHLSKNHFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVREVDAKDCVSLKE 963

Query: 301 LFGALKLCRSK---YTIINC 317
            +   K   S     T I C
Sbjct: 964 YYNKEKQIPSSEMGITFIRC 983



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 11/176 (6%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VLS   ++ +L  ++  L  L+QL L  CK L  +P  I  L+ L  L LSG S    FP
Sbjct: 675 VLSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNI-CLESLKILVLSGCSSLTHFP 733

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +I+S+ + LLE+HLE T+I+ L +SI  L+  ++ NLK+C NL  LPSTI  L SL+ + 
Sbjct: 734 KISSNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLN 793

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
            +GCS+L ++ E+LG + SLE         K+     CV Q+ + +   L K E+L
Sbjct: 794 LNGCSELDSLPESLGNISSLE---------KLDITSTCVNQAPM-SFQLLTKLEIL 839



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 28/204 (13%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           ++M  L +L+L+ TSI  + SSI  LT L +L LK C NL  LP TI SL  L+TL L+G
Sbjct: 737 SNMNYLLELHLEETSIKVLHSSIGHLTSLVVLNLKNCTNLLKLPSTIGSLTSLKTLNLNG 796

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR------L 115
           CS+L   P+ + ++  L KL +  T + + P S +LL  LE+L    C+ L R       
Sbjct: 797 CSELDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKLEIL---NCQGLSRKFLHSLF 853

Query: 116 PS---------SINGLK---------SLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSG 156
           P+            GLK         SL+ LNLS C   + ++P+ L  + SL+ L +S 
Sbjct: 854 PTWNFTRKFTIYSQGLKVTNWFTFGCSLRILNLSDCNLWDGDLPNDLRSLASLQILHLSK 913

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGC 180
               +   SI  + NLR L+   C
Sbjct: 914 NHFTKLPESICHLVNLRDLFLVEC 937



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 40/277 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTG-LELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+   + E    IE L+  L  L   G   L +LP   +    L  LEL
Sbjct: 576 FSSMTNLRVLKLNNVHLCE---EIEYLSDQLRFLNWHGYP-LKTLPSNFNPTNLLE-LEL 630

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
              S +        SME L  + L  +          ++P LE L L+ C  L +L  S+
Sbjct: 631 PNSS-IHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSL 689

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK L  L+L  C KL N+P  +                         +++L+ L  SG
Sbjct: 690 GNLKHLIQLDLRNCKKLTNIPFNI------------------------CLESLKILVLSG 725

Query: 180 CNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
           C+     P  S++ +  L  +L       + ++  S+  + SL  L+L +C      +PS
Sbjct: 726 CSSLTHFPKISSNMNYLLELHL---EETSIKVLHSSIGHLTSLVVLNLKNCT-NLLKLPS 781

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELEL 271
            I +L SLK L LN  +   +LP S+  + +LE+L++
Sbjct: 782 TIGSLTSLKTLNLNGCSELDSLPESLGNISSLEKLDI 818


>gi|104647033|gb|ABF74140.1| disease resistance protein [Arabidopsis thaliana]
          Length = 583

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 210/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P  I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPXXICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP  I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPXXICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 24/187 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLE 803
             + SLE
Sbjct: 206 QNLTSLE 212



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +P  I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPXXICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPXXICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQAAQIL 488


>gi|255547496|ref|XP_002514805.1| ATP binding protein, putative [Ricinus communis]
 gi|223545856|gb|EEF47359.1| ATP binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 221/472 (46%), Gaps = 89/472 (18%)

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            ++L++L++  + +  +   I+ L  L+++ L+   NL++       + +L++LNL GC +
Sbjct: 598  DELTELHMRCSIMERLWKGIKPLKMLKVIDLSYSVNLLK-TMDFKDVPNLESLNLEGCTR 656

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            L  V  +LG +  L+ L+V G A    TS +                 P +  W   LP 
Sbjct: 657  LFEVHQSLGILNRLK-LNVGGIA----TSQL-----------------PLAKLWDFLLPS 694

Query: 196  NLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
              L  K+  P+A+ LPSL+ + SL  LDLS C L E A+P+D+     LK   L+ N+F 
Sbjct: 695  RFLPWKNQNPLAVTLPSLSVLRSLKSLDLSYCNLMEGALPNDLSCFPMLKTFNLSGNDFF 754

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF-----GALKL-- 307
            ++P+SIS L  LE+    DCKRLQ+ P +P ++ ++  +GC+ L +L         KL  
Sbjct: 755  SIPSSISRLTKLEDFRFADCKRLQAFPNLPSSILYLSMDGCTVLQSLLPRNISRQFKLEN 814

Query: 308  -----CR------------------------------SKYTIINCIDSLKLLRKNGLAIS 332
                 C+                              S  T +NC+  +++  ++  A  
Sbjct: 815  LHVEDCKRLQLSPNLSSSILHLSVDGLTSQETQTSNSSSLTFVNCLKLIEVQSEDTSAFR 874

Query: 333  MLREYLEL------QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKV 386
             L  YL        Q + +P  ++SI   G++IP WF YQ+ GSS+ +  P + +  NK 
Sbjct: 875  RLTSYLHYLLRHSSQGLFNPSSQISICLAGNEIPGWFNYQSVGSSLKLQLPPFWW-TNKW 933

Query: 387  VGFAICCVFQVPKHSTGTYL----FHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHL 442
            +GFAI  VF+  +  T T       H+  A + +  +  S     ++      ++ SD L
Sbjct: 934  MGFAISIVFESQESQTDTSAILCDLHACIAEDQDLFLGSS----IVHISKDSSNITSDQL 989

Query: 443  WLLFLPRHG----HNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEE 490
            W  ++PR        W+   N ++++F   S    +VK CGF  I+  +++E
Sbjct: 990  WFNYMPRSSLTCLDMWE-ACNHLKVTF---SSDRLRVKHCGFRAIFSRDIDE 1037



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 23/158 (14%)

Query: 1   MASMKDLSDLYLDGTSITE--VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLE 58
           ++ ++ L  L L   ++ E  +P+ +     L+   L G  +  S+P +IS L  L    
Sbjct: 712 LSVLRSLKSLDLSYCNLMEGALPNDLSCFPMLKTFNLSG-NDFFSIPSSISRLTKLEDFR 770

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLP 116
            + C +L+ FP + +S+  LS   +DG ++ +  +P +I     LE L++ +CK L   P
Sbjct: 771 FADCKRLQAFPNLPSSILYLS---MDGCTVLQSLLPRNISRQFKLENLHVEDCKRLQLSP 827

Query: 117 S--------SINGLKSLKT-------LNLSGCCKLENV 139
           +        S++GL S +T       L    C KL  V
Sbjct: 828 NLSSSILHLSVDGLTSQETQTSNSSSLTFVNCLKLIEV 865


>gi|297813715|ref|XP_002874741.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297320578|gb|EFH51000.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1212

 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 147/438 (33%), Positives = 214/438 (48%), Gaps = 46/438 (10%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +A+ ++L  L L+G TS+ ++P++I  L  L  L L+ C +L SLP  + + + L+TL L
Sbjct: 651  LANAQNLERLNLEGCTSLKKLPTTINGLEKLVYLNLRDCTSLRSLPKGLKT-QSLQTLIL 709

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCS+LKKFP I    E++  L LDGT+I  +P SIE L  L LL L  CK L  L S +
Sbjct: 710  SGCSRLKKFPLIS---ENVEVLLLDGTAIKSLPESIETLRRLALLNLKNCKKLKHLSSDL 766

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LK L+ L LSGC +LE  P+    +ESLE L +  TAI      + L  N+++    G
Sbjct: 767  YKLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMMHL-SNIQTFSLCG 825

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             +                  + S  +  M P+L G   LT L LS C L    +P +I  
Sbjct: 826  TS-----------------SQVSVSMFFMPPTL-GCSRLTDLYLSRCSL--YKLPDNIGG 865

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SL+ L L+ NN   LP S + L NL+  +L+ CK L+SLP +P NLQ++ A+ C SL 
Sbjct: 866  LSSLQSLCLSGNNIENLPESFNQLHNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLE 925

Query: 300  TLFGAL------KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD-------- 345
            TL   L      +   S +   NC    KL +     +   R   +L A +         
Sbjct: 926  TLENPLTPLTVGERIHSMFIFSNCY---KLNQDAQSLVGHARIKSQLMANASVKRYYRGF 982

Query: 346  -PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGT 404
             P   + I +  + IP WF +Q  G S+ +  P +  + +  VG A+  V     +    
Sbjct: 983  IPEPLVGICYAATDIPSWFCHQRLGRSLEIPLPPHWCDTD-FVGLALSVVVSFMDYEDSA 1041

Query: 405  YLFHSYPAHELECSMDGS 422
              F      + E + DGS
Sbjct: 1042 KRFSVKCCGKFE-NQDGS 1058



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 4/139 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +++L   I  L  LV L L  C +L  LP+ +   + L TL LSG S+ ++FP I+ +
Sbjct: 666 TSLKKLPTTINGLEKLVYLNLRDCTSLRSLPKGLKT-QSLQTLILSGCSRLKKFPLISEN 724

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + LL   L+GTAI+ LP SIE L    L NLK+CK LK L S +  L+ L+ +  SGCS
Sbjct: 725 VEVLL---LDGTAIKSLPESIETLRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCS 781

Query: 788 KLKNVTETLGKVESLEVRL 806
           +L+   E    +ESLE+ L
Sbjct: 782 RLEVFPEIKEDMESLEILL 800



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 647 CSRLWEEADEFPDIVQ----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CSRL     +FP I +    +L DGT I+ L  +IE L  L  L L  CK L+ L   + 
Sbjct: 712 CSRL----KKFPLISENVEVLLLDGTAIKSLPESIETLRRLALLNLKNCKKLKHLSSDLY 767

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
            LK L  L LSG S+   FPEI    + L  + ++ TAI  +P  + L
Sbjct: 768 KLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMMHL 815


>gi|255537139|ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223549535|gb|EEF51023.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 252/534 (47%), Gaps = 84/534 (15%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTL---------KGCKNLSSLPVTISSLKCLRT 56
            +L  L+  G  +  +P+ I L+  L +L L         KGCK+L          K L+ 
Sbjct: 583  ELRYLHWHGYPLKSLPARIHLM-NLVVLVLPYSKVKRLWKGCKDL----------KKLKV 631

Query: 57   LELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRL 115
            ++LS    L +  ++  +  +LS + L G  ++  +PS+      L  L +N C  L  L
Sbjct: 632  IDLSYSQALIRITELTTA-SNLSYMKLSGCKNLRSMPSTTRW-KSLSTLEMNYCTKLESL 689

Query: 116  PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
            PSSI  LKSL++L+L GC  L++ P+ L  ++ L+ L ++GTAI+   SSI  +K L S+
Sbjct: 690  PSSICKLKSLESLSLCGCSNLQSFPEILESMDRLKVLVLNGTAIKELPSSIERLKGLSSI 749

Query: 176  YFSGCN---EPPAS-----ASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDC 226
            Y   C      P S     A + L L F       CP    LP  L+ + +L  L +  C
Sbjct: 750  YLENCRNLAHLPESFCNLKALYWLFLTF-------CPKLEKLPEKLSNLTTLEDLSVGVC 802

Query: 227  GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
             L    +PS +++L  + +L L+ N F  LP S   LLNL  L++  C+RL+SLP++P +
Sbjct: 803  NL--LKLPSHMNHLSCISKLDLSGNYFDQLP-SFKYLLNLRCLDISSCRRLRSLPEVPHS 859

Query: 287  LQFVRANGCSSLVTLFGALKLCRSKYT---------IINCIDSLKLLRKNGLAISMLREY 337
            L  + A+ C SL T+ G  ++ + KYT           +C    +    + LA +    +
Sbjct: 860  LTDIDAHDCRSLETISGLKQIFQLKYTHTFYDKKIIFTSCFKMDESAWSDFLADAQF--W 917

Query: 338  LELQAV-SDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF- 395
            ++  A+ +      SI +PGS+IPKWF YQ+EGSSI +      +  N ++GF +C V  
Sbjct: 918  IQKVAMRAKDEESFSIWYPGSKIPKWFGYQSEGSSIVIQLHPRSHKHN-LLGFTLCVVLA 976

Query: 396  ---QVPKHSTG-----TYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFL 447
               +   H++       Y   +Y     +C    S   H     GK  +V SDH+ L + 
Sbjct: 977  FEDEFEYHNSFFDVLCVYQLKNYRGEYTDCKEVYSSRTH---VSGKNKYVGSDHVILFYD 1033

Query: 448  PRHGHNWQFESNLIRLSFRSIS-DPTWK-----------VKRCGFHPIYMHEVE 489
            P        E+N   LS+   S +  W+           VK+C   P+Y  E E
Sbjct: 1034 PNFSST---EAN--ELSYNEASFEFYWQNNESCCMQSSMVKKCAAIPLYSREEE 1082



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 72/121 (59%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L +N C  LE LP +I  LK L +L+L G S  + FPEI  S D+L  + L GTAI+
Sbjct: 675 LSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSNLQSFPEILESMDRLKVLVLNGTAIK 734

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+SIE L G     L++C+NL  LP +   L++L  ++ + C KL+ + E L  + +L
Sbjct: 735 ELPSSIERLKGLSSIYLENCRNLAHLPESFCNLKALYWLFLTFCPKLEKLPEKLSNLTTL 794

Query: 803 E 803
           E
Sbjct: 795 E 795



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 30/215 (13%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +        +GT I+EL  +IE L GL  + L  C+NL  LP +   LK L  
Sbjct: 713 FPEILESMDRLKVLVLNGTAIKELPSSIERLKGLSSIYLENCRNLAHLPESFCNLKALYW 772

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN-LKSL 768
           L L+   K  + PE  S+   L ++ +    +  LP+ +  LS   +S L    N    L
Sbjct: 773 LFLTFCPKLEKLPEKLSNLTTLEDLSVGVCNLLKLPSHMNHLS--CISKLDLSGNYFDQL 830

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVET 828
           PS    L +LR +  S C +L+++ E                 P    D D  +  ++ET
Sbjct: 831 PS-FKYLLNLRCLDISSCRRLRSLPEV----------------PHSLTDIDAHDCRSLET 873

Query: 829 VTKLAKAELLRDSDSW---KKNVDKCMKLSTTATS 860
           ++ L +   L+ + ++   K     C K+  +A S
Sbjct: 874 ISGLKQIFQLKYTHTFYDKKIIFTSCFKMDESAWS 908



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 5/139 (3%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G  ++ L   I L+  LV L L   K ++RL +    LK L  ++LS         E+T+
Sbjct: 591 GYPLKSLPARIHLM-NLVVLVLPYSK-VKRLWKGCKDLKKLKVIDLSYSQALIRITELTT 648

Query: 727 SRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           + + L  + L G   +R +P++    S + L  +  C  L+SLPS+I  L+SL  +   G
Sbjct: 649 ASN-LSYMKLSGCKNLRSMPSTTRWKSLSTL-EMNYCTKLESLPSSICKLKSLESLSLCG 706

Query: 786 CSKLKNVTETLGKVESLEV 804
           CS L++  E L  ++ L+V
Sbjct: 707 CSNLQSFPEILESMDRLKV 725


>gi|38489219|gb|AAR21295.1| bacterial spot disease resistance protein 4 [Solanum lycopersicum]
          Length = 1146

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/378 (32%), Positives = 179/378 (47%), Gaps = 46/378 (12%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + EV  S+     L  L L  C  L   P    +++ L +L+L  C  +  FP+I+ +
Sbjct: 689  SKLEEVHYSLAYCEKLIELNLSWCTKLRRFPYI--NMESLESLDLQYCYGIMVFPEIIGT 746

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M+    +    T I E+PSS++    L  L L+  +NL  LPSSI  LK L  LN+S C 
Sbjct: 747  MKPELMILSANTMITELPSSLQYPTHLTELDLSGMENLEALPSSIVKLKDLVKLNVSYCL 806

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
             L+++P+ +G +E+LEELD S T I +P SSI  +  L+SL                 + 
Sbjct: 807  TLKSLPEEIGDLENLEELDASRTLISQPPSSIVRLNKLKSLKL---------------MK 851

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
             N L    C V    P   G+ SL  L+L      +  IP DI  L SLKEL L  +NF 
Sbjct: 852  RNTLTDDVCFV--FPPVNNGLLSLEILELGSSNFEDGRIPEDIGCLSSLKELRLEGDNFN 909

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
             LP SI+ L  L  L ++DC+ L SLP+ PP L  + A+  + L+     L +   ++  
Sbjct: 910  HLPQSIAQLGALRFLYIKDCRSLTSLPEFPPQLDTIFADWSNDLICKSLFLNISSFQHN- 968

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
            I+  DSL            LR +  L               GS IP WF +Q   +S++V
Sbjct: 969  ISASDSLS-----------LRVFTSL---------------GSSIPIWFHHQGTDTSVSV 1002

Query: 375  TRPSYLYNVNKVVGFAIC 392
              P   Y  +  +GFA+C
Sbjct: 1003 NLPENWYVSDNFLGFAVC 1020



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L++L L+ C  L R P     ++ L +L+L        FPEI  +    L I    T I 
Sbjct: 704 LIELNLSWCTKLRRFPYI--NMESLESLDLQYCYGIMVFPEIIGTMKPELMILSANTMIT 761

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+S++  +     +L   +NL++LPS+I  L+ L  +  S C  LK++ E +G +E+L
Sbjct: 762 ELPSSLQYPTHLTELDLSGMENLEALPSSIVKLKDLVKLNVSYCLTLKSLPEEIGDLENL 821

Query: 803 E 803
           E
Sbjct: 822 E 822



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 20/171 (11%)

Query: 657 FPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I+        +LS  T I EL  +++    L +L L+G +NLE LP +I  LK L  
Sbjct: 740 FPEIIGTMKPELMILSANTMITELPSSLQYPTHLTELDLSGMENLEALPSSIVKLKDLVK 799

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK--- 766
           LN+S     +  PE     + L E+    T I   P+SI  L  N L +LK  K      
Sbjct: 800 LNVSYCLTLKSLPEEIGDLENLEELDASRTLISQPPSSIVRL--NKLKSLKLMKRNTLTD 857

Query: 767 ----SLPSTINGLRSLRMMYPSGCSKLKN--VTETLGKVESL-EVRLSSWN 810
                 P   NGL SL ++   G S  ++  + E +G + SL E+RL   N
Sbjct: 858 DVCFVFPPVNNGLLSLEIL-ELGSSNFEDGRIPEDIGCLSSLKELRLEGDN 907


>gi|147841230|emb|CAN68969.1| hypothetical protein VITISV_043153 [Vitis vinifera]
          Length = 1074

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 199/435 (45%), Gaps = 47/435 (10%)

Query: 8   SDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
            +L LD  S  E    I ++  LE+L L     +  LP     L+ L+ L LSGCS  ++
Sbjct: 539 QNLCLDDCSNLENFPEIHVMKRLEILWLNNTA-IKELPNAFGCLEALQFLYLSGCSNFEE 597

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           FP+I  +M  L  L L+ T+I E+P SI  L  L  L L  CKNL  LP+SI GLKSL+ 
Sbjct: 598 FPEI-QNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLEV 656

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE---PP 184
           LN++GC  L   P+ +  ++ L EL +S T I     SI  +K LR L  + C      P
Sbjct: 657 LNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLP 716

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPS--LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            S     HL    L   +C     LP    +  C L +LDL+ C L + AIPSD+  L S
Sbjct: 717 NSIGNLTHL--RSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSS 774

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL- 301
           L+ L ++ +    +P +I  L NL  L +  C+ L+ +P++P  L+ + A GC  + TL 
Sbjct: 775 LRFLDVSESPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGTLS 834

Query: 302 -------FGALKLCRSKYTIINC-IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
                     L L +S+     C IDS           + +  Y          H   +V
Sbjct: 835 TPSSPLWSSLLNLFKSRTQYCECEIDS-----------NYMIWYF---------HVPKVV 874

Query: 354 FPGS-QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAIC---CVFQVPKHSTGTYLFHS 409
            PGS  IP+W  +Q+ G    +  P   Y  N  +GFA+           H  G +L   
Sbjct: 875 IPGSGGIPEWISHQSMGRQAIIELPKNRYEDNNFLGFAVFFRHLPLDFYSHEVGRFL--- 931

Query: 410 YPAHELECSMDGSGE 424
               EL  S D   E
Sbjct: 932 --QFELRISHDDQSE 944



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 655 DEFPDIVQVLS------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +EFP+I  + S      + T I+EL  +I  L  L  L L  CKNL  LP +I  LK L 
Sbjct: 596 EEFPEIQNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLE 655

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
            LN++G S    FPEI      L E+ L  T I  LP SIE L G     L +C+NL +L
Sbjct: 656 VLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTL 715

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
           P++I  L  LR +    CSKL N+ + L  ++    RL 
Sbjct: 716 PNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLD 754



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  MK L +L L  T ITE+P SIE L GL  L L  C+NL +LP +I +L  LR+L + 
Sbjct: 672 MEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVR 731

Query: 61  GCSKLKKFPQIVASME-DLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
            CSKL   P  + S++  L +L L G ++ +  +PS +  L  L  L ++E   +  +P+
Sbjct: 732 NCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESP-IPCIPT 790

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIF--LMKNLRS 174
           +I  L +L+TL ++ C  LE +P+   ++E LE         +  P+S ++  L+   +S
Sbjct: 791 NIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGTLSTPSSPLWSSLLNLFKS 850

Query: 175 -LYFSGCNEPPASASWHLHLP 194
              +  C        W+ H+P
Sbjct: 851 RTQYCECEIDSNYMIWYFHVP 871



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 140/317 (44%), Gaps = 39/317 (12%)

Query: 11  YLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           ++ G S I E+PSSIE L  LE LTL GC+N         +L+  R ++           
Sbjct: 471 FVKGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKK-------- 522

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
                             I E+P+S   L   + L L++C NL   P  I+ +K L+ L 
Sbjct: 523 ----------------ADIQELPNSFGYLESPQNLCLDDCSNLENFP-EIHVMKRLEILW 565

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--SGCNEPPASA 187
           L+    ++ +P+  G +E+L+ L +SG +       I  M +LR L    +   E P S 
Sbjct: 566 LNNTA-IKELPNAFGCLEALQFLYLSGCSNFEEFPEIQNMGSLRFLRLNETAIKELPCSI 624

Query: 188 SWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
             HL      L   +C     LP S+ G+ SL  L+++ C     A P  ++++  L EL
Sbjct: 625 G-HL-TKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCS-NLVAFPEIMEDMKHLGEL 681

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL-- 301
            L++     LP SI  L  L  L L +C+ L +LP    NL  +R+     CS L  L  
Sbjct: 682 LLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPD 741

Query: 302 -FGALKLCRSKYTIINC 317
              +L+ C  +  +  C
Sbjct: 742 NLRSLQCCLRRLDLAGC 758



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 23/162 (14%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLE----------------------RLPRT 700
           + +   DI+EL  +   L     L L+ C NLE                       LP  
Sbjct: 518 IQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNA 577

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
              L+ L  L LSG S F EFPEI  +   L  + L  TAI+ LP SI  L+     NL+
Sbjct: 578 FGCLEALQFLYLSGCSNFEEFPEI-QNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLE 636

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +CKNL+SLP++I GL+SL ++  +GCS L    E +  ++ L
Sbjct: 637 NCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHL 678



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 657 FPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++       +L   T I EL  +IE L GL +L LN C+NL  LP +I  L +L +
Sbjct: 668 FPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRS 727

Query: 710 LNLSGLSKFREFPE-ITSSRDQLLEIHLEGTAIR--GLPASIELLSGNILSNLKDCKNLK 766
           L +   SK    P+ + S +  L  + L G  +    +P+ +  LS     ++ +   + 
Sbjct: 728 LCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESP-IP 786

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            +P+ I  L +LR +  + C  L+ + E   ++E LE 
Sbjct: 787 CIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEA 824


>gi|227438287|gb|ACP30633.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 144/437 (32%), Positives = 207/437 (47%), Gaps = 42/437 (9%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +A   +L  L L+G TS+  +PSSI  L  L  L L+ C +L SLP    S + L+TL L
Sbjct: 652  LAKAHNLERLNLEGCTSLKMLPSSINCLEKLVYLNLRECTSLKSLPEETKS-QSLQTLIL 710

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCS LKKFP I  S+E    L LDGT+I  +P SIE    L  L L  CK L  L S++
Sbjct: 711  SGCSSLKKFPLISESIE---VLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNL 767

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LK L+ L LSGC +LE  P+    +ESLE L +  T+I     ++  + N+++    G
Sbjct: 768  YKLKCLQELILSGCSQLEVFPEIKEDMESLEILLLDDTSITE-MPNMKHLSNIKTFSLCG 826

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             N                  + S  V  + P L G   LT L LS C L    IP+   N
Sbjct: 827  TN-----------------CEVSVRVLFLSPPL-GCSRLTDLYLSRCSL--YRIPNISGN 866

Query: 240  LHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
              S  +      N +  LP S + L NL+  +L+ CK L+SLP +P NLQ++ A+ C SL
Sbjct: 867  GLSSLQSLCLSGNSIENLPESFNQLHNLKWFDLKYCKNLKSLPVLPQNLQYLDAHECESL 926

Query: 299  VTLFGAL------KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD------- 345
             TL   L      +   S +   NC    +  +++ +  + ++  L   A          
Sbjct: 927  ETLANPLTPLTVRERIHSMFMFSNCYKLNQDAQESLVGHARIKSQLMANASVKRYYRGFI 986

Query: 346  PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY 405
            P   + + FP ++IP WF YQ  G S+ ++ P +  + N  VG A   V    ++     
Sbjct: 987  PEPLVGVCFPATEIPSWFFYQRLGRSLDISLPPHWCDTN-FVGLAFSVVVSFKEYEDCAK 1045

Query: 406  LFHSYPAHELECSMDGS 422
             F    + + E   DGS
Sbjct: 1046 RFSVKFSGKFE-DQDGS 1061



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 4/139 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L  +I  L  LV L L  C +L+ LP    + + L TL LSG S  ++FP I+ S
Sbjct: 667 TSLKMLPSSINCLEKLVYLNLRECTSLKSLPEETKS-QSLQTLILSGCSSLKKFPLISES 725

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + LL   L+GTAI+ LP SIE  S     NLK+CK LK L S +  L+ L+ +  SGCS
Sbjct: 726 IEVLL---LDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKLKCLQELILSGCS 782

Query: 788 KLKNVTETLGKVESLEVRL 806
           +L+   E    +ESLE+ L
Sbjct: 783 QLEVFPEIKEDMESLEILL 801



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 20/145 (13%)

Query: 656 EFPDIVQ----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           +FP I +    +L DGT I+ L  +IE    L  L L  CK L+ L   +  LK L  L 
Sbjct: 718 KFPLISESIEVLLLDGTAIKSLPDSIETSSKLASLNLKNCKRLKHLSSNLYKLKCLQELI 777

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP-S 770
           LSG S+   FPEI    + L  + L+ T+I  +P            N+K   N+K+    
Sbjct: 778 LSGCSQLEVFPEIKEDMESLEILLLDDTSITEMP------------NMKHLSNIKTFSLC 825

Query: 771 TINGLRSLRMMY---PSGCSKLKNV 792
             N   S+R+++   P GCS+L ++
Sbjct: 826 GTNCEVSVRVLFLSPPLGCSRLTDL 850


>gi|224094841|ref|XP_002334784.1| predicted protein [Populus trichocarpa]
 gi|222874625|gb|EEF11756.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/329 (37%), Positives = 180/329 (54%), Gaps = 27/329 (8%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++K L  L+L G S +  +P SI  L  LE L L GC  L+SLP +I +LK L++L+L
Sbjct: 130 IGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLASLPDSIGALKSLQSLDL 189

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS L   P  + +++ L  L+L G S +A +P SI  L  L+ L+L  C  L  LP S
Sbjct: 190 KGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALKSLDSLHLYGCSGLASLPDS 249

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I  LKS+++L L GC  L ++PD +G ++SLE L +SG + +     SI  +K+L+SL+ 
Sbjct: 250 IGALKSIESLYLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIGALKSLKSLHL 309

Query: 178 SGCNEPPA---------SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           SGC+   +         S  W LHL +   G +S P      S+  + SL  L LS C  
Sbjct: 310 SGCSGLASLPDSIGALKSLEW-LHL-YGCSGLASLP-----DSIGALKSLESLHLSGCS- 361

Query: 229 GEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IP 284
           G A++P  I  L SL+ L+L   +   +LP SI  L +L+ L L  C  L SLP      
Sbjct: 362 GLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLHLSGCSGLASLPDSIGAL 421

Query: 285 PNLQFVRANGCSSLVTL---FGALKLCRS 310
            +L+++   GCS L +L    GALK  +S
Sbjct: 422 KSLEWLHLYGCSGLASLPDSIGALKSLKS 450



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 21/305 (6%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++K L  L L G S +  +P +I+ L  L+ L L GC  L+SLP +I +LK L +L L
Sbjct: 178 IGALKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALKSLDSLHL 237

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS L   P  + +++ +  LYL G S +A +P +I  L  LE L+L+ C  L  LP S
Sbjct: 238 YGCSGLASLPDSIGALKSIESLYLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDS 297

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I  LKSLK+L+LSGC  L ++PD++G ++SLE L + G + +     SI  +K+L SL+ 
Sbjct: 298 IGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLESLHL 357

Query: 178 SGCNEPPA---------SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           SGC+   +         S  W LHL +   G +S P      S+  + SL  L LS C  
Sbjct: 358 SGCSGLASLPDSIGALKSLEW-LHL-YGCSGLASLP-----DSIGALKSLKSLHLSGCS- 409

Query: 229 GEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           G A++P  I  L SL+ L+L   +   +LP SI  L +L+ L L  C  L SLP     L
Sbjct: 410 GLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLHLYGCSGLASLPDTIGAL 469

Query: 288 QFVRA 292
           + +++
Sbjct: 470 KSLKS 474



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/311 (38%), Positives = 162/311 (52%), Gaps = 19/311 (6%)

Query: 11  YLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           YL G S +  +P SI  L  LE L L GC  L+SLP  I +LK L  L LSGCS L   P
Sbjct: 68  YLYGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLP 127

Query: 70  QIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
             + +++ L  L+L G S +A +P SI  L  LE L+L  C  L  LP SI  LKSL++L
Sbjct: 128 DSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLASLPDSIGALKSLQSL 187

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE----P 183
           +L GC  L ++PD +  ++SL+ L + G + +     SI  +K+L SL+  GC+     P
Sbjct: 188 DLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALKSLDSLHLYGCSGLASLP 247

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDNLHS 242
            +  +        L G   C     LP   G   SL  L LS C  G A++P  I  L S
Sbjct: 248 DSIGALKSIESLYLYG---CSGLASLPDNIGALKSLEWLHLSGCS-GLASLPDSIGALKS 303

Query: 243 LKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSL 298
           LK L+L+  +   +LP SI  L +LE L L  C  L SLP       +L+ +  +GCS L
Sbjct: 304 LKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLESLHLSGCSGL 363

Query: 299 VTL---FGALK 306
            +L    GALK
Sbjct: 364 ASLPDSIGALK 374



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 146/300 (48%), Gaps = 58/300 (19%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKL------------------- 81
           L+SLP  I  LK L  L L  CSKL   P  + ++E +S+L                   
Sbjct: 3   LASLPDNIDELKSLVELHLYACSKLASLPNSIGNVE-ISRLASSLWLLRTSKSTGQHWRV 61

Query: 82  ------YLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
                 YL G S +A +P SI  L  LE L+L  C  L  LP +I  LKSL+ L+LSGC 
Sbjct: 62  EISRRAYLYGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDNIGALKSLEWLHLSGCS 121

Query: 135 KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            L ++PD++G ++SLE L ++G + +     SI  +K+L SL+  GC+            
Sbjct: 122 GLASLPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCS------------ 169

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNN 252
                G +S P      S+  + SL  LDL  C  G A++P +ID L SL  L+L   + 
Sbjct: 170 -----GLASLP-----DSIGALKSLQSLDLKGCS-GLASLPDNIDALKSLDWLHLYGCSG 218

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL---FGALK 306
             +LP SI  L +L+ L L  C  L SLP     L+ + +    GCS L +L    GALK
Sbjct: 219 LASLPDSIGALKSLDSLHLYGCSGLASLPDSIGALKSIESLYLYGCSGLASLPDNIGALK 278



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 2/156 (1%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++K L  L+L G S +  +P SI  L  LE L L GC  L+SLP +I +LK L  L L
Sbjct: 322 IGALKSLEWLHLYGCSGLASLPDSIGALKSLESLHLSGCSGLASLPDSIGALKSLEWLHL 381

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS L   P  + +++ L  L+L G S +A +P SI  L  LE L+L  C  L  LP S
Sbjct: 382 YGCSGLASLPDSIGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDS 441

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           I  LKSLK+L+L GC  L ++PDT+G ++SL+ LD+
Sbjct: 442 IGALKSLKSLHLYGCSGLASLPDTIGALKSLKSLDL 477



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + +  L  +I  L  L  L L+GC  L  LP +I ALK L  L+L G S     P+
Sbjct: 285 LSGCSGLASLPDSIGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPD 344

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  +HL G + +  LP SI  L      +L  C  L SLP +I  L+SL+ ++
Sbjct: 345 SIGALKSLESLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLH 404

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCS L ++ +++G ++SLE
Sbjct: 405 LSGCSGLASLPDSIGALKSLE 425



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 1/129 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  +  L L GC  L  LP  I ALK L  L+LSG S     P+   +   L  +H
Sbjct: 249 SIGALKSIESLYLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIGALKSLKSLH 308

Query: 736 LEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L G + +  LP SI  L      +L  C  L SLP +I  L+SL  ++ SGCS L ++ +
Sbjct: 309 LSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLESLHLSGCSGLASLPD 368

Query: 795 TLGKVESLE 803
           ++G ++SLE
Sbjct: 369 SIGALKSLE 377



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I  L  L  L L+GC  L  LP +I ALK L +L+L+G S     P+   +   L  +HL
Sbjct: 106 IGALKSLEWLHLSGCSGLASLPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHL 165

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            G + +  LP SI  L      +LK C  L SLP  I+ L+SL  ++  GCS L ++ ++
Sbjct: 166 YGCSGLASLPDSIGALKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDS 225

Query: 796 LGKVESLE 803
           +G ++SL+
Sbjct: 226 IGALKSLD 233



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 1/129 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L L+GC  L  LP +I ALK L  L+L G S     P+   +   L  +H
Sbjct: 345 SIGALKSLESLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLH 404

Query: 736 LEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L G + +  LP SI  L      +L  C  L SLP +I  L+SL+ ++  GCS L ++ +
Sbjct: 405 LSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDSIGALKSLKSLHLYGCSGLASLPD 464

Query: 795 TLGKVESLE 803
           T+G ++SL+
Sbjct: 465 TIGALKSLK 473



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L  L  L L GC  L  LP +I ALK L +L+L G S     P+   +   +  ++L
Sbjct: 202 IDALKSLDWLHLYGCSGLASLPDSIGALKSLDSLHLYGCSGLASLPDSIGALKSIESLYL 261

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            G + +  LP +I  L      +L  C  L SLP +I  L+SL+ ++ SGCS L ++ ++
Sbjct: 262 YGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIGALKSLKSLHLSGCSGLASLPDS 321

Query: 796 LGKVESLE 803
           +G ++SLE
Sbjct: 322 IGALKSLE 329



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + +  L  +I  L  L  L L GC  L  LP +I ALK L +L+L G S     P+
Sbjct: 117 LSGCSGLASLPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLESLHLYGCSGLASLPD 176

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  + L+G + +  LP +I+ L      +L  C  L SLP +I  L+SL  ++
Sbjct: 177 SIGALKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALKSLDSLH 236

Query: 783 PSGCSKLKNVTETLGKVESLE 803
             GCS L ++ +++G ++S+E
Sbjct: 237 LYGCSGLASLPDSIGALKSIE 257



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L L GC  L  LP +I ALK + +L L G S     P+   +   L  +H
Sbjct: 225 SIGALKSLDSLHLYGCSGLASLPDSIGALKSIESLYLYGCSGLASLPDNIGALKSLEWLH 284

Query: 736 LEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L G + +  LP SI  L      +L  C  L SLP +I  L+SL  ++  GCS L ++ +
Sbjct: 285 LSGCSGLASLPDSIGALKSLKSLHLSGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPD 344

Query: 795 TLGKVESLE 803
           ++G ++SLE
Sbjct: 345 SIGALKSLE 353



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 119/264 (45%), Gaps = 67/264 (25%)

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LP +I+ LKSL  L+L  C KL ++P+++G VE           I R  SS++L++ 
Sbjct: 3   LASLPDNIDELKSLVELHLYACSKLASLPNSIGNVE-----------ISRLASSLWLLRT 51

Query: 172 LRS------------LYFSGCNEPPA---------SASW-HLH-------LPFNL----- 197
            +S             Y  GC+   +         S  W HL+       LP N+     
Sbjct: 52  SKSTGQHWRVEISRRAYLYGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDNIGALKS 111

Query: 198 ---LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNN 252
              L  S C     LP S+  + SL  L L+ C  G A++P  I  L SL+ L+L   + 
Sbjct: 112 LEWLHLSGCSGLASLPDSIGALKSLESLHLTGCS-GLASLPDSIGALKSLESLHLYGCSG 170

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQFVRANGCSSLVTL---FGALK 306
             +LP SI  L +L+ L+L+ C  L SLP       +L ++   GCS L +L    GALK
Sbjct: 171 LASLPDSIGALKSLQSLDLKGCSGLASLPDNIDALKSLDWLHLYGCSGLASLPDSIGALK 230

Query: 307 LCRSKYTIINCIDSLKLLRKNGLA 330
                      +DSL L   +GLA
Sbjct: 231 ----------SLDSLHLYGCSGLA 244



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L L GC  L  LP  I ALK L  L+LSG S     P+   +   L  +H
Sbjct: 81  SIGALKSLEWLHLYGCSGLASLPDNIGALKSLEWLHLSGCSGLASLPDSIGALKSLESLH 140

Query: 736 LEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L G + +  LP SI  L      +L  C  L SLP +I  L+SL+ +   GCS L ++ +
Sbjct: 141 LTGCSGLASLPDSIGALKSLESLHLYGCSGLASLPDSIGALKSLQSLDLKGCSGLASLPD 200

Query: 795 TLGKVESLE 803
            +  ++SL+
Sbjct: 201 NIDALKSLD 209



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 23/116 (19%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
           L GC  L  LP +I ALK L  L+L G S     P+   +   L  +HL G         
Sbjct: 69  LYGCSGLASLPDSIGALKSLEWLHLYGCSGLASLPDNIGALKSLEWLHLSG--------- 119

Query: 748 IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
                         C  L SLP +I  L+SL  ++ +GCS L ++ +++G ++SLE
Sbjct: 120 --------------CSGLASLPDSIGALKSLESLHLTGCSGLASLPDSIGALKSLE 161


>gi|359493561|ref|XP_002268895.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1080

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 199/435 (45%), Gaps = 47/435 (10%)

Query: 8   SDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
            +L LD  S  E    I ++  LE+L L     +  LP     L+ L+ L LSGCS  ++
Sbjct: 545 QNLCLDDCSNLENFPEIHVMKRLEILWLNNTA-IKELPNAFGCLEALQFLYLSGCSNFEE 603

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           FP+I  +M  L  L L+ T+I E+P SI  L  L  L L  CKNL  LP+SI GLKSL+ 
Sbjct: 604 FPEI-QNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLEV 662

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE---PP 184
           LN++GC  L   P+ +  ++ L EL +S T I     SI  +K LR L  + C      P
Sbjct: 663 LNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLP 722

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPS--LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            S     HL    L   +C     LP    +  C L +LDL+ C L + AIPSD+  L S
Sbjct: 723 NSIGNLTHL--RSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSS 780

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL- 301
           L+ L ++ +    +P +I  L NL  L +  C+ L+ +P++P  L+ + A GC  + TL 
Sbjct: 781 LRFLDVSESPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGTLS 840

Query: 302 -------FGALKLCRSKYTIINC-IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
                     L L +S+     C IDS           + +  Y          H   +V
Sbjct: 841 TPSSPLWSSLLNLFKSRTQYCECEIDS-----------NYMIWYF---------HVPKVV 880

Query: 354 FPGS-QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAIC---CVFQVPKHSTGTYLFHS 409
            PGS  IP+W  +Q+ G    +  P   Y  N  +GFA+           H  G +L   
Sbjct: 881 IPGSGGIPEWISHQSMGRQAIIELPKNRYEDNNFLGFAVFFRHLPLDFYSHEVGRFL--- 937

Query: 410 YPAHELECSMDGSGE 424
               EL  S D   E
Sbjct: 938 --QFELRISHDDQSE 950



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 166/375 (44%), Gaps = 66/375 (17%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELL----TLKGC---KNLSSLPVTISSLKCLRTL 57
           ++L  LY +   +  +PS+      +EL     T+K     + ++     +SS+  L  L
Sbjct: 394 QELRYLYWEAYPLQTLPSNFNGENLVELHMRNSTIKQLWKGRKIAHQNAKLSSMPNLEEL 453

Query: 58  ELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--- 114
            L+ C +LKKFP+I  +M  L  LYL  + I E+PSSIE LP LE L L  C+N  +   
Sbjct: 454 YLAFCERLKKFPEIRGNMGSLRILYLGQSGIKEIPSSIEYLPALEFLTLWGCRNFDKFQD 513

Query: 115 --------------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
                               LP+S   L+S + L L  C  LEN P+ +  ++ LE L +
Sbjct: 514 NFGNLRHRRFIQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPE-IHVMKRLEILWL 572

Query: 155 SGTAIRRPTSSIFLMKNLRSLYFSGCN-------------------------EPPASASW 189
           + TAI+   ++   ++ L+ LY SGC+                         E P S   
Sbjct: 573 NNTAIKELPNAFGCLEALQFLYLSGCSNFEEFPEIQNMGSLRFLRLNETAIKELPCSIG- 631

Query: 190 HLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
           HL      L   +C     LP S+ G+ SL  L+++ C     A P  ++++  L EL L
Sbjct: 632 HL-TKLRDLNLENCKNLRSLPNSICGLKSLEVLNINGCS-NLVAFPEIMEDMKHLGELLL 689

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL---F 302
           ++     LP SI  L  L  L L +C+ L +LP    NL  +R+     CS L  L    
Sbjct: 690 SKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNL 749

Query: 303 GALKLCRSKYTIINC 317
            +L+ C  +  +  C
Sbjct: 750 RSLQCCLRRLDLAGC 764



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 82/159 (51%), Gaps = 6/159 (3%)

Query: 655 DEFPDIVQVLS------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +EFP+I  + S      + T I+EL  +I  L  L  L L  CKNL  LP +I  LK L 
Sbjct: 602 EEFPEIQNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLENCKNLRSLPNSICGLKSLE 661

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
            LN++G S    FPEI      L E+ L  T I  LP SIE L G     L +C+NL +L
Sbjct: 662 VLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTL 721

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
           P++I  L  LR +    CSKL N+ + L  ++    RL 
Sbjct: 722 PNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLD 760



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  MK L +L L  T ITE+P SIE L GL  L L  C+NL +LP +I +L  LR+L + 
Sbjct: 678 MEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVR 737

Query: 61  GCSKLKKFPQIVASME-DLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPS 117
            CSKL   P  + S++  L +L L G ++ +  +PS +  L  L  L ++E   +  +P+
Sbjct: 738 NCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESP-IPCIPT 796

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIF--LMKNLRS 174
           +I  L +L+TL ++ C  LE +P+   ++E LE         +  P+S ++  L+   +S
Sbjct: 797 NIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEAPGCPHVGTLSTPSSPLWSSLLNLFKS 856

Query: 175 -LYFSGCNEPPASASWHLHLP 194
              +  C        W+ H+P
Sbjct: 857 RTQYCECEIDSNYMIWYFHVP 877



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 78/162 (48%), Gaps = 23/162 (14%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLE----------------------RLPRT 700
           + +   DI+EL  +   L     L L+ C NLE                       LP  
Sbjct: 524 IQAKKADIQELPNSFGYLESPQNLCLDDCSNLENFPEIHVMKRLEILWLNNTAIKELPNA 583

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
              L+ L  L LSG S F EFPEI  +   L  + L  TAI+ LP SI  L+     NL+
Sbjct: 584 FGCLEALQFLYLSGCSNFEEFPEI-QNMGSLRFLRLNETAIKELPCSIGHLTKLRDLNLE 642

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +CKNL+SLP++I GL+SL ++  +GCS L    E +  ++ L
Sbjct: 643 NCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHL 684



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 657 FPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++       +L   T I EL  +IE L GL +L LN C+NL  LP +I  L +L +
Sbjct: 674 FPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRS 733

Query: 710 LNLSGLSKFREFPE-ITSSRDQLLEIHLEGTAIR--GLPASIELLSGNILSNLKDCKNLK 766
           L +   SK    P+ + S +  L  + L G  +    +P+ +  LS     ++ +   + 
Sbjct: 734 LCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMKGAIPSDLWCLSSLRFLDVSESP-IP 792

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            +P+ I  L +LR +  + C  L+ + E   ++E LE 
Sbjct: 793 CIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVLEA 830



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
           +S++  L  L L+   + ++FPEI  +   L  ++L  + I+ +P+SIE L       L 
Sbjct: 444 LSSMPNLEELYLAFCERLKKFPEIRGNMGSLRILYLGQSGIKEIPSSIEYLPALEFLTLW 503

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            C+N          LR  R +     + ++ +  + G +ES
Sbjct: 504 GCRNFDKFQDNFGNLRHRRFIQAKK-ADIQELPNSFGYLES 543


>gi|147841678|emb|CAN73064.1| hypothetical protein VITISV_003258 [Vitis vinifera]
          Length = 1567

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 215/498 (43%), Gaps = 105/498 (21%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + EVP  IE  + L+ L L+ C+NL+SLP +I   K L TL  SGCS+L+ FP+I+  
Sbjct: 1084 SDMNEVPI-IENPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 1142

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ME L KL+LDGT+I E+PSSI+ L  L+ L L   KNLV LP SI  L S KTL +  C 
Sbjct: 1143 MESLRKLFLDGTAIKEIPSSIQRLRVLQYLLLRS-KNLVNLPESICNLTSFKTLVVESCP 1201

Query: 135  KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
              + +PD LG+++SL  L V    ++     S+  + +LR+L   GCN    S   H   
Sbjct: 1202 NFKKLPDNLGRLQSLLHLSVGPLDSMNFQLPSLSGLCSLRALNLQGCNLKGISQGNHF-- 1259

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                                                 + IP  I  L+            
Sbjct: 1260 -------------------------------------SRIPDGISQLY------------ 1270

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
                       NLE+L+L  CK LQ +P++P  L  + A+ C+SL  L     L  S  +
Sbjct: 1271 -----------NLEDLDLGHCKMLQHIPELPSGLWCLDAHHCTSLENLSSQSNLLWS--S 1317

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
            +  C              S ++  + +Q     G ++        IP+W  +Q  G  IT
Sbjct: 1318 LFKCFK------------SQIQRVIFVQQREFRG-RVKTFIAEFGIPEWISHQKSGFKIT 1364

Query: 374  VTRPSYLYNVNKVVGFAICCVFQVPKHSTGT-YLFHSYPAHELECSMDGSGEGHYIYFRG 432
            +  P   Y  +  +GF +C ++   +  T T + F+        C ++   +  Y  ++ 
Sbjct: 1365 MKLPWSWYENDDFLGFVLCFLYVPLEIETKTPWCFN--------CKLNFDDDSAYFSYQS 1416

Query: 433  K------FGHVVSDHLWLLFLPR-------HGHNWQFESNLIRLSFRSISDPTWKVKRCG 479
                   +    S    L++ P+       H + W+  +    + F     P  KV RCG
Sbjct: 1417 DQFCEFCYDEDASSQGCLMYYPKSRIPKSYHSNEWRTLNASFNVYFG--VKPV-KVARCG 1473

Query: 480  FHPIYMHEVEEFDETTKQ 497
            FH +Y H+ E+ + T  Q
Sbjct: 1474 FHFLYAHDYEQNNLTIVQ 1491



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 140/299 (46%), Gaps = 38/299 (12%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C +L  LP  I   K L+TL+ +GC KLE  P+  G +  L  LD+SGT
Sbjct: 639 VPNLEILTLEGCVSLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRKLRVLDLSGT 698

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI  +  L++L    C++     S+  HL                       S
Sbjct: 699 AIMDLPSSITHLNGLQTLLLEECSKLHKIPSYICHLS----------------------S 736

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L  L+L  C + E  IPSDI  L SL++L L   +F ++P +I+ L  L+ L L  C  L
Sbjct: 737 LKVLNLGHCNMMEGGIPSDICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNL 796

Query: 278 QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREY 337
           + +P++P  L+ + A+G +   +      L    ++++NC    +  ++   + S     
Sbjct: 797 EQIPELPSRLRLLDAHGSNRTSSRAPYFPL----HSLVNCFSWAQDSKRTSFSDS----- 847

Query: 338 LELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
                 S  G    IV PGS  IP+W M +          P   +  N+ +GFAICCV+
Sbjct: 848 ------SYHGKGTCIVLPGSDGIPEWIMDRENIHFAEAELPQNWHQNNEFLGFAICCVY 900



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 92/153 (60%), Gaps = 1/153 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+LTL+GC +L  LP  I   K L+TL  +GCSKL++FP+I  +M  L  L L GT+I 
Sbjct: 642 LEILTLEGCVSLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 701

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVES 148
           ++PSSI  L GL+ L L EC  L ++PS I  L SLK LNL  C  +E  +P  +  + S
Sbjct: 702 DLPSSITHLNGLQTLLLEECSKLHKIPSYICHLSSLKVLNLGHCNMMEGGIPSDICYLSS 761

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L++L++ G        +I  +  L++L  S CN
Sbjct: 762 LQKLNLEGGHFSSIPPTINQLSRLKALNLSHCN 794



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D+ E+ + IE    L  L L  C+NL  LP +I   K L+TL+ SG S+   FPEI   
Sbjct: 1084 SDMNEVPI-IENPSELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQD 1142

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSN-LKDCKNLKSLPSTINGLRSLRMMYPSGC 786
             + L ++ L+GTAI+ +P+SI+ L   +L   L   KNL +LP +I  L S + +    C
Sbjct: 1143 MESLRKLFLDGTAIKEIPSSIQRL--RVLQYLLLRSKNLVNLPESICNLTSFKTLVVESC 1200

Query: 787  SKLKNVTETLGKVESL 802
               K + + LG+++SL
Sbjct: 1201 PNFKKLPDNLGRLQSL 1216



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 62/105 (59%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC +LE LPR I   K+L TL+ +G SK   FPEI  +  +L  + L GTAI  LP
Sbjct: 645 LTLEGCVSLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLP 704

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           +SI  L+G     L++C  L  +PS I  L SL+++    C+ ++
Sbjct: 705 SSITHLNGLQTLLLEECSKLHKIPSYICHLSSLKVLNLGHCNMME 749



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 12/151 (7%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L+LDGT+I E+PSSI+ L  L+ L L+  KNL +LP +I +L   +TL + 
Sbjct: 1140 LQDMESLRKLFLDGTAIKEIPSSIQRLRVLQYLLLRS-KNLVNLPESICNLTSFKTLVVE 1198

Query: 61   GCSKLKKFPQIVASMEDLSKLY---LDGTSIAEVPSSIEL-------LPGLELLYLNECK 110
             C   KK P  +  ++ L  L    LD  +  ++PS   L       L G  L  +++  
Sbjct: 1199 SCPNFKKLPDNLGRLQSLLHLSVGPLDSMNF-QLPSLSGLCSLRALNLQGCNLKGISQGN 1257

Query: 111  NLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            +  R+P  I+ L +L+ L+L  C  L+++P+
Sbjct: 1258 HFSRIPDGISQLYNLEDLDLGHCKMLQHIPE 1288



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P  I  L  L+ L L  
Sbjct: 685 GNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSYICHLSSLKVLNLGH 744

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+G   + +P +I  L  L+ L L+ C NL ++P
Sbjct: 745 CNMMEGGIPSDICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIP 800



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 12/140 (8%)

Query: 647 CSRLWEEADEFPDI------VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FP+I      ++VL   GT I +L  +I  L GL  L L  C  L ++P 
Sbjct: 674 CSKL----ERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPS 729

Query: 700 TISALKYLSTLNLSGLSKFR-EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
            I  L  L  LNL   +      P        L +++LEG     +P +I  LS     N
Sbjct: 730 YICHLSSLKVLNLGHCNMMEGGIPSDICYLSSLQKLNLEGGHFSSIPPTINQLSRLKALN 789

Query: 759 LKDCKNLKSLPSTINGLRSL 778
           L  C NL+ +P   + LR L
Sbjct: 790 LSHCNNLEQIPELPSRLRLL 809


>gi|359486106|ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 166/596 (27%), Positives = 256/596 (42%), Gaps = 130/596 (21%)

Query: 1    MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             +SM +L  L L G  S+ ++  S+  +  L  L+L+GC NL  LP +I  L+ L  L+L
Sbjct: 646  FSSMPNLERLILQGCLSLIDIHPSVGNMKKLTTLSLRGCDNLKDLPDSIGDLESLEILDL 705

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR----- 114
            + CS+ +KFP+   +M+ L +L+L  T+I ++P+SI  L  L++LYL +C    +     
Sbjct: 706  TDCSRFEKFPEKGGNMKSLKELFLRNTAIKDLPNSIGNLESLKILYLTDCSKFDKFPEKG 765

Query: 115  ------------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
                              LP SI  L+SL+TL+LS C K E  P+  G ++SL+EL +  
Sbjct: 766  GNMKSLKELSLINTAIKDLPDSIGDLESLETLDLSDCSKFEKFPEKGGNMKSLKELFLIK 825

Query: 157  TAIRRPTSSIFLMKNLRSL---YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLT 213
            TAI+   +SI  + +L  L   Y+S   + P        L   +L  S+  +  +  S+ 
Sbjct: 826  TAIKDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNSA--IKDLPDSIG 883

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             + SL  LDLSDC   E   P    N+ SL+ L+L       LP SI  L +LE L+L D
Sbjct: 884  DLESLETLDLSDCSRFEK-FPEKGGNMKSLENLFLINTAIKDLPDSIGDLESLEILDLSD 942

Query: 274  C-----------------------------------------------KRLQSLPQIPPN 286
            C                                               K L+SLP     
Sbjct: 943  CSKFEKFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSGLRNLIIAECKSLRSLPDNISR 1002

Query: 287  LQFVRA---NGCSSLVTLFGALKLCR-SKYTIINC---------------IDSLKLLRKN 327
            L+F+     +GCS L     + +LC   K  I  C               ID+     K 
Sbjct: 1003 LKFLETLILSGCSDLWEGLISNQLCNLGKLNISQCKMAGQILELPSSLEEIDAHDCRSKE 1062

Query: 328  GLAISMLREYLE-LQAVSDPGH--KLSIVFP-GSQIPKWFMYQNEGSSITVTRPSYLYNV 383
             L+  +   +L  L++ ++     KL  + P  S  P+W  YQN G+ +T   P+  Y  
Sbjct: 1063 DLSSLLWICHLNWLKSTTEELKCWKLRAIIPENSGNPEWIRYQNLGTEVTTELPTNWYED 1122

Query: 384  NKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFG-----HVV 438
               +GF + CV +    S G    HSY    L C++   G G     +  F      H +
Sbjct: 1123 PDFLGFVVSCVCRSIPTSDG----HSYF---LGCALKLHGNGFEFKDKCLFDCQCKCHGI 1175

Query: 439  S---DHLWLLFLPR------HGHNWQFESNLIRLSFRSISDPTW-KVKRCGFHPIY 484
            +   D +W+ + P+      H H +      I  SFR      W ++K+CG + I+
Sbjct: 1176 NDLVDQVWVWWYPKIAIPKEHHHKYTH----INASFRG----KWTEIKKCGINLIF 1223



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 49/253 (19%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELL 98
           N+  L      L+ LR ++LS   +L +  +  +SM +L +L L G  S+ ++  S+  +
Sbjct: 615 NIKQLWQENKYLEGLRVIDLSYSRELIQMLEF-SSMPNLERLILQGCLSLIDIHPSVGNM 673

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L  L L  C NL  LP SI  L+SL+ L+L+ C + E  P+  G ++SL+EL +  TA
Sbjct: 674 KKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSLKELFLRNTA 733

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           I+   +SI  +++L+ LY                                          
Sbjct: 734 IKDLPNSIGNLESLKILY------------------------------------------ 751

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
               L+DC   +   P    N+ SLKEL L       LP SI  L +LE L+L DC + +
Sbjct: 752 ----LTDCSKFDK-FPEKGGNMKSLKELSLINTAIKDLPDSIGDLESLETLDLSDCSKFE 806

Query: 279 SLPQIPPNLQFVR 291
             P+   N++ ++
Sbjct: 807 KFPEKGGNMKSLK 819



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L+L GC NL+ LP +I  L+ L  L+L+  S+F +FPE   +   L E+ L  TAI+
Sbjct: 676 LTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSLKELFLRNTAIK 735

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    +  L DC      P     ++SL+ +     + +K++ +++G +ESL
Sbjct: 736 DLPNSIGNLESLKILYLTDCSKFDKFPEKGGNMKSLKELSLINTA-IKDLPDSIGDLESL 794

Query: 803 EV 804
           E 
Sbjct: 795 ET 796



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 4/98 (4%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L  L+LS  SKF +FPE+      L +++L  T I  L +SI+ LSG
Sbjct: 922  IKDLPDSIGDLESLEILDLSDCSKFEKFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSG 981

Query: 754  NILSNL--KDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
              L NL   +CK+L+SLP  I+ L+ L  +  SGCS L
Sbjct: 982  --LRNLIIAECKSLRSLPDNISRLKFLETLILSGCSDL 1017



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 2/119 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L L+  SKF +FPE   +   L E+ L  TAI+ LP SI  L  
Sbjct: 734 IKDLPNSIGNLESLKILYLTDCSKFDKFPEKGGNMKSLKELSLINTAIKDLPDSIGDLES 793

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV-RLSSWNR 811
               +L DC   +  P     ++SL+ ++    + +K++  ++G + SLEV  LS ++R
Sbjct: 794 LETLDLSDCSKFEKFPEKGGNMKSLKELFLIKTA-IKDLPNSIGDLGSLEVLDLSYYSR 851



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 23/133 (17%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI-ELLS 752
           ++ LP +I  L+ L TL+LS  SKF +FPE   +   L E+ L  TAI+ LP SI +L S
Sbjct: 781 IKDLPDSIGDLESLETLDLSDCSKFEKFPEKGGNMKSLKELFLIKTAIKDLPNSIGDLGS 840

Query: 753 GNILS---------------NLKDCKNL-------KSLPSTINGLRSLRMMYPSGCSKLK 790
             +L                N+K  + L       K LP +I  L SL  +  S CS+ +
Sbjct: 841 LEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNSAIKDLPDSIGDLESLETLDLSDCSRFE 900

Query: 791 NVTETLGKVESLE 803
              E  G ++SLE
Sbjct: 901 KFPEKGGNMKSLE 913



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 1/111 (0%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L  L  L+LS  S+F +FPE   +   L  + L+ +AI+ LP SI  L  
Sbjct: 828 IKDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLEVLILKNSAIKDLPDSIGDLES 887

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
               +L DC   +  P     ++SL  ++    + +K++ +++G +ESLE+
Sbjct: 888 LETLDLSDCSRFEKFPEKGGNMKSLENLFLINTA-IKDLPDSIGDLESLEI 937



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 23/134 (17%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L TL+LS  S+F +FPE   +   L  + L  TAI+ LP SI  L  
Sbjct: 875  IKDLPDSIGDLESLETLDLSDCSRFEKFPEKGGNMKSLENLFLINTAIKDLPDSIGDLES 934

Query: 754  NILSNLKDCKNLKSLP-----------------------STINGLRSLRMMYPSGCSKLK 790
              + +L DC   +  P                       S+I+ L  LR +  + C  L+
Sbjct: 935  LEILDLSDCSKFEKFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSGLRNLIIAECKSLR 994

Query: 791  NVTETLGKVESLEV 804
            ++ + + +++ LE 
Sbjct: 995  SLPDNISRLKFLET 1008



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 11/109 (10%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I EL+ +I+ L GL  L +  CK+L  LP  IS LK+L TL LSG S   E   I++ 
Sbjct: 967  TTIEELTSSIDNLSGLRNLIIAECKSLRSLPDNISRLKFLETLILSGCSDLWE-GLISNQ 1025

Query: 728  RDQLLEIHLEGTAIRG----LPASIELLSGNILSNLKDCKNLKSLPSTI 772
               L ++++    + G    LP+S+E +  +      DC++ + L S +
Sbjct: 1026 LCNLGKLNISQCKMAGQILELPSSLEEIDAH------DCRSKEDLSSLL 1068


>gi|296089468|emb|CBI39287.3| unnamed protein product [Vitis vinifera]
          Length = 1166

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 221/478 (46%), Gaps = 63/478 (13%)

Query: 11   YLD--GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
            YLD  G S+  +P+       + L     C  +  L   I  L+ L+ ++LS    L + 
Sbjct: 649  YLDLYGYSLKSLPNDFNAKNLVHLSM--PCSRIEQLWKGIKVLEKLKRMDLSHSKYLIET 706

Query: 69   PQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P + + + +L +L L D  S+ +V  S+  L  L+ L L  CK L  LPS    LKSL+ 
Sbjct: 707  PNL-SRVTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEI 765

Query: 128  LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
            L LSGC K E   +  G +E L+EL   GTA+R   SS+ L +NL  L   GC  PP+++
Sbjct: 766  LILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGPPSAS 825

Query: 188  SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
             W    P     +SS      L +L+G+CSL+ L+LS C L +    S +  L SL+ L+
Sbjct: 826  WW---FP----RRSSNSTGFRLHNLSGLCSLSTLNLSYCNLSDETNLSSLVLLSSLEYLH 878

Query: 248  LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
            L  NNFVTLP ++S L  LE+++LE+C RLQ LP +P ++  + A  C+SL  +   LK 
Sbjct: 879  LCGNNFVTLP-NLSRLSRLEDVQLENCTRLQELPDLPSSIGLLDARNCTSLKNVQSHLK- 936

Query: 308  CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQN 367
                                   I +L   L L  ++          PGS++P W  Y++
Sbjct: 937  --------------------NRVIRVLNLVLGLYTLT----------PGSRLPDWIRYKS 966

Query: 368  EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY 427
             G  +    P   +N N  +GF    V  VPK S G   FH+            SG  HY
Sbjct: 967  SGMEVIAELPPNWFNSN-FLGFWFAIV--VPKFS-GLDRFHA--VSCSLSLSRSSGFTHY 1020

Query: 428  IYF--RGKFGHVVSDHLWLLFLPRH------GH-NWQFESNLIRLSF---RSISDPTW 473
              F        ++ DH+ L +          GH NW   +++  L +      S+P W
Sbjct: 1021 FTFCPHSSCQMLMLDHVALFYFSLSFLSDWCGHINWHQVTHIKALFYPHSVQFSEPKW 1078



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL D   + ++  ++  L  L  L+L  CK L+ LP     LK L  L LSG SKF +F 
Sbjct: 719 VLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFL 778

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           E   + + L E++ +GTA+R LP+S+ L    ++ +L+ CK
Sbjct: 779 ENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCK 819



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L++  C  +E+L + I  L+ L  ++LS      E P ++   +    +  +  ++ 
Sbjct: 669 LVHLSM-PCSRIEQLWKGIKVLEKLKRMDLSHSKYLIETPNLSRVTNLERLVLEDCVSLC 727

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +  S+  L      +LK+CK LKSLPS    L+SL ++  SGCSK +   E  G +E L
Sbjct: 728 KVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEML 787

Query: 803 E 803
           +
Sbjct: 788 K 788



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 21/147 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----LPVTISSLKCLRT 56
             +++ L +LY DGT++ E+PSS+ L   L +L+L+GCK   S     P   S+    R 
Sbjct: 781 FGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGPPSASWWFPRRSSNSTGFRL 840

Query: 57  LELSG-CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC-KNLVR 114
             LSG CS              LS L L   ++++  +   L+    L YL+ C  N V 
Sbjct: 841 HNLSGLCS--------------LSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNNFVT 886

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD 141
           LP +++ L  L+ + L  C +L+ +PD
Sbjct: 887 LP-NLSRLSRLEDVQLENCTRLQELPD 912


>gi|163914239|dbj|BAF95889.1| N-like protein [Nicotiana tabacum]
          Length = 1169

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 139/400 (34%), Positives = 197/400 (49%), Gaps = 46/400 (11%)

Query: 11   YLDGT---SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
            YLD +   ++ EV  S+   + L  L L  CK+L   P    +++ L  L+L GCS L+K
Sbjct: 656  YLDMSFCFNLEEVHHSLGCCSKLIGLDLTDCKSLKRFPCV--NVESLEYLDLPGCSSLEK 713

Query: 68   FPQIVASMEDLSKLYLDGTSIAEVPSS-IELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            FP+I   M+   ++++  + I E+PSS       +  L L++ +NLV  PSSI  L SL 
Sbjct: 714  FPEIRGRMKLEIQIHM-RSGIRELPSSSFHYQTRITWLDLSDMENLVVFPSSICRLISLV 772

Query: 127  TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--SGCNEPP 184
             L +SGC KLE++P+ +G +++LE L  S T I RP SSI  +  L SL F  SG N   
Sbjct: 773  QLFVSGCSKLESLPEEIGDLDNLEVLYASDTLISRPPSSIVRLNKLNSLSFRCSGDN--- 829

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                 H   P         PVA       G+ SL  LDLS C L +  +P DI +L SLK
Sbjct: 830  ---GVHFEFP---------PVA------EGLLSLKNLDLSYCNLIDGGLPEDIGSLSSLK 871

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
            EL L  NNF  LP SI+ L  L  L L  C+ L  LP++   L  +  + C   +     
Sbjct: 872  ELDLRGNNFEHLPRSIAQLGALRSLGLSFCQTLIQLPELSHELNELHVD-CHMALKFIND 930

Query: 305  LKLCRSKYTII--------NCIDSLKLLRKNGL--AISMLREYLELQAVSDP--GHKLSI 352
            L   R K   +           DS+  L  + L   IS LR  +   +VSD    +  +I
Sbjct: 931  LVTKRKKLQRVVFPPLYDDAHNDSIYNLFAHALFQNISSLRHDI---SVSDSLFENVFTI 987

Query: 353  VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAIC 392
                 +IP WF ++   SS++V  P   Y  +K +GFA+C
Sbjct: 988  WHYWKKIPSWFHHKGTDSSVSVDLPENWYIPDKFLGFAVC 1027



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 6/128 (4%)

Query: 683 LVQLTLNGCKNLERLP-RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
           L+ L L  CK+L+R P   + +L+YL   +L G S   +FPEI       ++IH+  + I
Sbjct: 678 LIGLDLTDCKSLKRFPCVNVESLEYL---DLPGCSSLEKFPEIRGRMKLEIQIHMR-SGI 733

Query: 742 RGLPASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           R LP+S       I   +L D +NL   PS+I  L SL  ++ SGCSKL+++ E +G ++
Sbjct: 734 RELPSSSFHYQTRITWLDLSDMENLVVFPSSICRLISLVQLFVSGCSKLESLPEEIGDLD 793

Query: 801 SLEVRLSS 808
           +LEV  +S
Sbjct: 794 NLEVLYAS 801


>gi|359493412|ref|XP_002280045.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1077

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 210/449 (46%), Gaps = 59/449 (13%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIE 96
           C  +  L   I  L+ L+ ++LS    L + P + + + +L +L L D  S+ +V  S+ 
Sbjct: 576 CSRIEQLWKGIKVLEKLKRMDLSHSKYLIETPNL-SRVTNLERLVLEDCVSLCKVHPSLR 634

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            L  L+ L L  CK L  LPS    LKSL+ L LSGC K E   +  G +E L+EL   G
Sbjct: 635 DLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEMLKELYADG 694

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
           TA+R   SS+ L +NL  L   GC  PP+++ W    P     +SS      L +L+G+C
Sbjct: 695 TALRELPSSLSLSRNLVILSLEGCKGPPSASWW---FP----RRSSNSTGFRLHNLSGLC 747

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           SL+ L+LS C L +    S +  L SL+ L+L  NNFVTLP ++S L  LE+++LE+C R
Sbjct: 748 SLSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNNFVTLP-NLSRLSRLEDVQLENCTR 806

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE 336
           LQ LP +P ++  + A  C+SL  +   LK                        I +L  
Sbjct: 807 LQELPDLPSSIGLLDARNCTSLKNVQSHLK---------------------NRVIRVLNL 845

Query: 337 YLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ 396
            L L  ++          PGS++P W  Y++ G  +    P   +N N  +GF    V  
Sbjct: 846 VLGLYTLT----------PGSRLPDWIRYKSSGMEVIAELPPNWFNSN-FLGFWFAIV-- 892

Query: 397 VPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYF--RGKFGHVVSDHLWLLFLPRH---- 450
           VPK S G   FH+            SG  HY  F        ++ DH+ L +        
Sbjct: 893 VPKFS-GLDRFHA--VSCSLSLSRSSGFTHYFTFCPHSSCQMLMLDHVALFYFSLSFLSD 949

Query: 451 --GH-NWQFESNLIRLSF---RSISDPTW 473
             GH NW   +++  L +      S+P W
Sbjct: 950 WCGHINWHQVTHIKALFYPHSVQFSEPKW 978



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 74/136 (54%), Gaps = 15/136 (11%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+ +V  S+  L  L+ L+LK CK L SLP     LK L  L LSGCSK ++F +  
Sbjct: 622 DCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLENF 681

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-------LVRLPS-------- 117
            ++E L +LY DGT++ E+PSS+ L   L +L L  CK          R  S        
Sbjct: 682 GNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGPPSASWWFPRRSSNSTGFRLH 741

Query: 118 SINGLKSLKTLNLSGC 133
           +++GL SL TLNLS C
Sbjct: 742 NLSGLCSLSTLNLSYC 757



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL D   + ++  ++  L  L  L+L  CK L+ LP     LK L  L LSG SKF +F 
Sbjct: 619 VLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFL 678

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           E   + + L E++ +GTA+R LP+S+ L    ++ +L+ CK
Sbjct: 679 ENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCK 719



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 40/239 (16%)

Query: 595 MCCINSMVSQAKAISQQGQFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEA 654
           +C I S++ ++  IS  G   +M  +        ++ G + VR+QS QE G  SRL    
Sbjct: 460 LCGIRSLIDKS-LISIYGNKFQMHDL-------IQEMGLEIVRQQSLQELGKRSRLLFHE 511

Query: 655 DEFPDIVQV----------------LSDGTDIRELSLAIELLFG--------------LV 684
           D + D+++                 L +  D    + A   L+G              LV
Sbjct: 512 DIY-DVLKKNTGSEKIEGIFLNLFHLQETIDFTTQAFAGMNLYGYSLKSLPNDFNAKNLV 570

Query: 685 QLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
            L++  C  +E+L + I  L+ L  ++LS      E P ++   +    +  +  ++  +
Sbjct: 571 HLSM-PCSRIEQLWKGIKVLEKLKRMDLSHSKYLIETPNLSRVTNLERLVLEDCVSLCKV 629

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             S+  L      +LK+CK LKSLPS    L+SL ++  SGCSK +   E  G +E L+
Sbjct: 630 HPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEMLK 688



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 21/147 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----LPVTISSLKCLRT 56
             +++ L +LY DGT++ E+PSS+ L   L +L+L+GCK   S     P   S+    R 
Sbjct: 681 FGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCKGPPSASWWFPRRSSNSTGFRL 740

Query: 57  LELSG-CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC-KNLVR 114
             LSG CS              LS L L   ++++  +   L+    L YL+ C  N V 
Sbjct: 741 HNLSGLCS--------------LSTLNLSYCNLSDETNLSSLVLLSSLEYLHLCGNNFVT 786

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD 141
           LP +++ L  L+ + L  C +L+ +PD
Sbjct: 787 LP-NLSRLSRLEDVQLENCTRLQELPD 812


>gi|124360483|gb|ABN08493.1| Leucine-rich repeat, typical subtype [Medicago truncatula]
          Length = 445

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 183/366 (50%), Gaps = 40/366 (10%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G   +TEV  S+     + L+ L+ CK+L SLP  +  +  L  L L
Sbjct: 13  FSGVPNLEKLILKGCDGLTEVHPSLLHHKKVVLMNLEDCKSLKSLPGKLE-MSSLEKLIL 71

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGC + K  P+   SME+LS L L+G +I  +PSS+  L GL  L L  CK+LV LP +I
Sbjct: 72  SGCCEFKILPEFGESMENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTI 131

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           + L SL  LN+SGC +L  +PD L +++ L+EL  + TAI    SSIF + NL+      
Sbjct: 132 HRLNSLIILNISGCSRLCRLPDGLKEIKCLKELHANDTAIDELPSSIFYLDNLK------ 185

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                             +G          P SL  + SL  ++LS C L E +IP  + 
Sbjct: 186 ------------------IGSQQASTGFRFPTSLWNLPSLRYINLSYCNLSEESIPDYLR 227

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           +L SLK L L  NNFV +P++IS L  L  L L  C++LQ LP+I  ++  + A+ C SL
Sbjct: 228 HLSSLKSLDLTGNNFVYIPSTISKLPKLHFLYLNCCQKLQLLPEISSSMTELDASNCDSL 287

Query: 299 -VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
             T F   K C    ++      L  + K       +  ++E   +  P  +  ++ PG 
Sbjct: 288 ETTKFNPAKPC----SVFASPRQLSYVEKK------INSFIE--GLCLPSARFDMLIPGK 335

Query: 358 QIPKWF 363
           + P  +
Sbjct: 336 ETPSCY 341



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDGTD-IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G D + E+  ++     +V + L  CK+L+ LP  +  +  L  L LSG  
Sbjct: 17  PNLEKLILKGCDGLTEVHPSLLHHKKVVLMNLEDCKSLKSLPGKLE-MSSLEKLILSGCC 75

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           +F+  PE   S + L  + LEG AIR LP+S+  L G    NLK+CK+L  LP TI+ L 
Sbjct: 76  EFKILPEFGESMENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTIHRLN 135

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL ++  SGCS+L  + + L +++ L+
Sbjct: 136 SLIILNISGCSRLCRLPDGLKEIKCLK 162



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 650 LWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           L E  +   ++  +  +G  IR L  ++  L GL  L L  CK+L  LP TI  L  L  
Sbjct: 80  LPEFGESMENLSMLALEGIAIRNLPSSLGSLVGLASLNLKNCKSLVCLPDTIHRLNSLII 139

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           LN+SG S+    P+       L E+H   TAI  LP+SI  L    + + +     +  P
Sbjct: 140 LNISGCSRLCRLPDGLKEIKCLKELHANDTAIDELPSSIFYLDNLKIGSQQASTGFR-FP 198

Query: 770 STINGLRSLRMMYPSGCS 787
           +++  L SLR +  S C+
Sbjct: 199 TSLWNLPSLRYINLSYCN 216


>gi|298204609|emb|CBI23884.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 243/552 (44%), Gaps = 114/552 (20%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + M +L  L+L+G  S+ ++  S+  L  L  L+L+ C  L +LP +I  L+ L  L L
Sbjct: 574  FSRMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILNL 633

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CSK +KFP    +M+ L KL+L  T+I ++P SI  L  LE+L L++C    + P   
Sbjct: 634  SYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKG 693

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG----------------------- 156
              +KSL  L L     ++++PD++G +ESLE LDVSG                       
Sbjct: 694  GNMKSLNQLLLRNTA-IKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLLRN 752

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSL 212
            TAI+    SI  +++L SL  S C++    P    +         L   +  +  +  S+
Sbjct: 753  TAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMK---SLKKLRLRNTAIKDLPDSI 809

Query: 213  TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS----------- 261
              + SL  LDLSDC   E   P    N+  L+EL+L       LP +IS           
Sbjct: 810  GDLKSLEFLDLSDCSKFE-KFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKLKRLVLS 868

Query: 262  -------GLL-----NLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
                   GL+     NL++L +  CK    +  +P +L+ + A  C+S   L G L LC 
Sbjct: 869  DCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLEEIDAYHCTSKEDLSGLLWLCH 928

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
                 +N + S     K    ++++RE                    + IP+W  YQN G
Sbjct: 929  -----LNWLKSTTEELKCWKLVAVIRE-------------------SNGIPEWIRYQNMG 964

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQ-VPKHSTGTYLFHSYPAHELECSMDGSGEGHYI 428
            S +T   P+  Y     +GF + CV++ +P   T  +    Y   +L C ++  G G   
Sbjct: 965  SEVTTELPTNWYEDPHFLGFVVSCVYRHIP---TSDF---DYRDVDLMCELNLHGNG--F 1016

Query: 429  YFRGK---------FGHVVSDHLWLLFLPR------HGHNWQFESNLIRLSFRSISDPTW 473
             F+GK         F  ++ D + + + P+      H H +      I  SFR      W
Sbjct: 1017 EFKGKCYRYDSPGNFKDLI-DQVCVWWYPKIAIRKEHHHKYTH----INASFRG----HW 1067

Query: 474  -KVKRCGFHPIY 484
             ++K+CG   I+
Sbjct: 1068 TEIKKCGIDLIF 1079



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 138/315 (43%), Gaps = 61/315 (19%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLK-GCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L  DG  +  +PS+ +   G +L+ L   C N+  L +    L+ L+ ++LS   K
Sbjct: 511 ELRYLCWDGYPLDFLPSNFD---GGKLVELHLHCSNIKRLWLGNKDLERLKVIDLSYSRK 567

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L         M + S++                 P LE L+LN C +L+ +  S+  LK 
Sbjct: 568 L-------IQMSEFSRM-----------------PNLESLFLNGCVSLIDIHPSVGNLKK 603

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVS------------------------GTAIR 160
           L TL+L  C KL+N+PD++  +ESLE L++S                         TAI+
Sbjct: 604 LTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIK 663

Query: 161 RPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
               SI  +++L  L  S C++    P    +       N L   +  +  +  S+  + 
Sbjct: 664 DLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMK---SLNQLLLRNTAIKDLPDSIGDLE 720

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           SL  LD+S  G      P    N+ SL +L L       LP SI  L +LE L+L DC +
Sbjct: 721 SLESLDVS--GSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSK 778

Query: 277 LQSLPQIPPNLQFVR 291
            +  P+   N++ ++
Sbjct: 779 FEKFPEKGGNMKSLK 793



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L+L  C  L+ LP +I  L+ L  LNLS  SKF +FP    +   L ++HL+ TAI+
Sbjct: 604 LTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIK 663

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L DC   +  P     ++SL  +     + +K++ +++G +ESL
Sbjct: 664 DLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLRNTA-IKDLPDSIGDLESL 722

Query: 803 E 803
           E
Sbjct: 723 E 723



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L +L+LS  SKF +FPE   +   L ++ L  TAI+ LP SI  L  
Sbjct: 755 IKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKS 814

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMY---------PSGCSKLKNV 792
               +L DC   +  P     ++ LR ++         P+  S+LK +
Sbjct: 815 LEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKL 862



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 23/137 (16%)

Query: 652 EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER--------------- 696
           E+      + Q+L   T I++L  +I  L  L  L L+ C   E+               
Sbjct: 737 EKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLR 796

Query: 697 --------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI 748
                   LP +I  LK L  L+LS  SKF +FPE   +  +L E+HL+ TAI+ LP +I
Sbjct: 797 LRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNI 856

Query: 749 ELLSGNILSNLKDCKNL 765
             L       L DC +L
Sbjct: 857 SRLKKLKRLVLSDCSDL 873


>gi|255569048|ref|XP_002525493.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223535172|gb|EEF36851.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1084

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 213/449 (47%), Gaps = 56/449 (12%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRT---LELSGC 62
           +L  L+ DG  ++ +PS+ +             +NL  L +  SS+K L T   L LSGC
Sbjct: 565 ELRYLHGDGYPLSYMPSNFQ------------AENLVQLTLAYSSIKQLWTGVQLILSGC 612

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           S + +FP +     D+ KL+LDGT+I E+PSSI+  P L  L L  CK  +RLP +I   
Sbjct: 613 SSITEFPHVSW---DIKKLFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRTIWKF 669

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           K L+ LNLSGC    + P+ L  + SL+ L + GT I    S +  +  L SL    C  
Sbjct: 670 KLLQKLNLSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCK- 728

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPS---LTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                        NL G        ++ S   + G+  L KL+LS C L E  +P  ID 
Sbjct: 729 -------------NLYGLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLLE--VPYCIDC 773

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L L+RN F  +P SI+ L  L+ L L DCK+L SLP +PP L  + A+ C SL 
Sbjct: 774 LPSLESLDLSRNLFEEIPVSINKLFELQYLGLRDCKKLISLPDLPPRLTKLDAHKCCSLK 833

Query: 300 TLF---GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP-GHKLSIVFP 355
           +       ++    ++   NC  SL L  +  +    L ++   Q  S+   H++S +  
Sbjct: 834 SASLDPTGIEGNNFEFFFTNC-HSLDLDERRKIIAYALTKF---QVYSERLHHQMSYLLA 889

Query: 356 GSQ---IPKWF-MYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH---STGTYLFH 408
           G     IP W   + ++G+S TV  PS   + +  +GF +     V        G + F 
Sbjct: 890 GESSLWIPSWVRRFHHKGASTTVQLPSNWAD-SDFLGFELVTSIAVDCRICKCNGDHDFQ 948

Query: 409 SYPAHEL--ECSMDGSGEGHYIYFRGKFG 435
               +    E   DG G+  Y Y+ G +G
Sbjct: 949 VKCRYHFKNEYIYDG-GDDLYCYYGGWYG 976



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 17/166 (10%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP    DI ++  DGT I E+  +I+    LV+L+L  CK   RLPRTI   K L  LN
Sbjct: 617 EFPHVSWDIKKLFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRTIWKFKLLQKLN 676

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL--- 768
           LSG S F  FPEI      L  ++L+GT I  LP+ +  L G +   L+ CKNL  L   
Sbjct: 677 LSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLYGLQEV 736

Query: 769 --------PSTINGLRSLRMMYPSGCSKLK--NVTETLGKVESLEV 804
                   P+T+ G++ LR +  SGC  L+     + L  +ESL++
Sbjct: 737 ISGRVVKSPATVGGIQYLRKLNLSGCCLLEVPYCIDCLPSLESLDL 782



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 72/139 (51%), Gaps = 16/139 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L  LYLDGT I+ +PS +  L GL  L L+ CKNL  L   IS              
Sbjct: 693 MGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLYGLQEVIS-------------G 739

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV-RLPSSINGL 122
           ++ K P  V  ++ L KL L G  + EVP  I+ LP LE L L+  +NL   +P SIN L
Sbjct: 740 RVVKSPATVGGIQYLRKLNLSGCCLLEVPYCIDCLPSLESLDLS--RNLFEEIPVSINKL 797

Query: 123 KSLKTLNLSGCCKLENVPD 141
             L+ L L  C KL ++PD
Sbjct: 798 FELQYLGLRDCKKLISLPD 816



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 56/131 (42%), Gaps = 19/131 (14%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERL-----------P 698
           FP+I++V+        DGT I  L   +  L GL+ L L  CKNL  L           P
Sbjct: 686 FPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLYGLQEVISGRVVKSP 745

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
            T+  ++YL  LNLSG     E P        L  + L       +P SI  L       
Sbjct: 746 ATVGGIQYLRKLNLSGCC-LLEVPYCIDCLPSLESLDLSRNLFEEIPVSINKLFELQYLG 804

Query: 759 LKDCKNLKSLP 769
           L+DCK L SLP
Sbjct: 805 LRDCKKLISLP 815


>gi|104646949|gb|ABF74098.1| disease resistance protein [Arabidopsis thaliana]
          Length = 585

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 139/454 (30%), Positives = 209/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           L+L  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  ++E    L +  TSI  +P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTNIE---VLRISETSIEAIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S TAIRR   SI  +  L+ L                    N    S
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLAIG-----------------NSFYTS 362

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
              +  + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 363 EGLLHSLCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                +       ++   ++L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 -----KXXXXXXXLIHRNMKLES-AKPEHX---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  +S   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNSLKIH 559



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L ++P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +L+L  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                                    L  
Sbjct: 198 LENLPDTLQNLTSLETLEVSGC-----------------------------------LNV 222

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
           N   + S  + ++  S T +                AIP+ I NL  L+ L ++ N    
Sbjct: 223 NEFPRVSTNIEVLRISETSI---------------EAIPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L    L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNTRRLF---L 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           ++++ + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTNIEVL---RISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+N+P  +  ++SLE + +SG +  +    I    N R L+ S    
Sbjct: 94  KGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEI--SYNTRRLFLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  N++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLR 236


>gi|297825395|ref|XP_002880580.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326419|gb|EFH56839.1| hypothetical protein ARALYDRAFT_320248 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1067

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 200/414 (48%), Gaps = 76/414 (18%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  ++L  L L+G TS+ E P  I+ +  L  L L+GC  L SLP    +L  L+TL L
Sbjct: 620 LSKAENLQRLNLEGCTSLDEFPLEIQNMKSLVFLNLRGCIRLCSLPEV--NLISLKTLIL 677

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S CS L++F  I  S+E    L+LDGT+I  +P +I+ L  L +L L  CK L  LP+ +
Sbjct: 678 SDCSNLEEFQLISESVE---FLHLDGTAIKGLPQAIQKLQRLVVLNLKNCKMLACLPNCL 734

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFS 178
             LK+L  L LSGC +L+N+PD    ++ L  L   GT  +  P+ S           F+
Sbjct: 735 GNLKALDKLILSGCSRLKNLPDVRNSLKHLHTLLFDGTGAKEMPSISC----------FT 784

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           G +E PASA   L                 L S+T                    P  ++
Sbjct: 785 G-SEGPASADMFLQ---------------TLGSMT------------------EWPCAVN 810

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            + SL+ L L+ N+FV+L   I  L NL+ L+++ C +L+S+P +PP LQ+  A+GC SL
Sbjct: 811 RVSSLRHLCLSGNDFVSLQPDIGKLYNLKWLDVKHCTKLRSVPMLPPKLQYFDAHGCDSL 870

Query: 299 VTLFGALKL------CRSKYTIINC-------IDSL--KLLRKNGLAISMLREY---LEL 340
             +   +          + ++  NC        DS+    LR++ L    L +Y   L  
Sbjct: 871 KRVADPIAFSVLSDQIHATFSFTNCNKLDQDAKDSIISYTLRRSQLVRDELTQYNGGLVS 930

Query: 341 QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
           +A+      +   FPG ++P WF +Q  GS +    P++  + NK  G  +C V
Sbjct: 931 EAL------IGTCFPGWEVPAWFSHQASGSVLKPKLPAHWCD-NKFTGIGLCAV 977



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 21/179 (11%)

Query: 648 SRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           +R+WE   + P +  V LS  +++ +LS A+     L +L L GC +L+  P  I  +K 
Sbjct: 591 TRVWEGEKDTPRLKWVDLSHSSELLDLS-ALSKAENLQRLNLEGCTSLDEFPLEIQNMKS 649

Query: 707 LSTLNLSGLSKFREFPE---------ITSSRDQLLE----------IHLEGTAIRGLPAS 747
           L  LNL G  +    PE         I S    L E          +HL+GTAI+GLP +
Sbjct: 650 LVFLNLRGCIRLCSLPEVNLISLKTLILSDCSNLEEFQLISESVEFLHLDGTAIKGLPQA 709

Query: 748 IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           I+ L   ++ NLK+CK L  LP+ +  L++L  +  SGCS+LKN+ +    ++ L   L
Sbjct: 710 IQKLQRLVVLNLKNCKMLACLPNCLGNLKALDKLILSGCSRLKNLPDVRNSLKHLHTLL 768


>gi|359493388|ref|XP_003634583.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1196

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 165/566 (29%), Positives = 245/566 (43%), Gaps = 116/566 (20%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++SM++L  L L G +       ++ L GLE L L  CKNL SLP +I SL  L+TL+L 
Sbjct: 632  ISSMQNLETLILKGCT-----RLLKHLNGLEELDLSNCKNLLSLPDSIGSLNSLQTLDLV 686

Query: 61   GCSKLKKFPQI-VASMEDLSKLYLDG-TSIAEVPSSIEL--------------------- 97
             CSKL  F  I + S++ L  L L    ++  +P+SI                       
Sbjct: 687  ECSKLVGFTNINIGSLKALEYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDI 746

Query: 98   ----LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT-LGKVESLEEL 152
                L  LELL  + C+NL  LP SI  L SLKTL ++ C KLE + +  LG       L
Sbjct: 747  NFGSLKALELLDFSHCRNLESLPVSIYNLSSLKTLGITNCPKLEEMLEIKLGVDWPFSPL 806

Query: 153  --DVSGTAIR---------------RPTSSIFLMKNLRSLYFSGCNEPPASASWHLH-LP 194
               +S +AI                 P   +  +  L    F G  E   S S+HL  L 
Sbjct: 807  TCHISNSAITWYDDWHDCFSSLEALNPQCPLSSLVELSVRKFYGMEEDILSGSFHLSSLQ 866

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH------------- 241
               LG        +L  +  + SL KL L+ C   E  IP DI NL              
Sbjct: 867  ILSLGNFPSVAEGILDKIFHLSSLVKLSLTKCKPTEEGIPGDIWNLSPLQQLSLRDCNLM 926

Query: 242  ------------SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
                        SL+ELYL  N+F ++PA IS L NL+ L+L  CK LQ +P++P +L+F
Sbjct: 927  EGKILNHICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKNLQQIPELPSSLRF 986

Query: 290  VRA---NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP 346
            + A   +G SS  +L          ++++NC  S    RK      ++  Y         
Sbjct: 987  LDAHCSDGISSSPSLLPI-------HSMVNCFKSEIEDRK------VINHYSYFW----- 1028

Query: 347  GHKLSIVFP-GSQIPKWFMYQNEG-SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGT 404
            G+ + IV P  S I +W  Y+N G + +TV  P   Y  + + GFA+CCV+  P + +  
Sbjct: 1029 GNGIGIVIPRSSGILEWITYRNMGRNEVTVELPPNWYKNDDLWGFALCCVYVAPAYESQY 1088

Query: 405  YLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLS 464
             L H     + E   +G G   + Y +           W++  P+      + +N  + +
Sbjct: 1089 ELGH-ISKDDAELEDEGPG---FCYMQ-----------WVICYPKLAIEESYHTN--QWT 1131

Query: 465  FRSISDPTWKVKRCGFHPIYMHEVEE 490
                S    +V+ CG   +Y  + E+
Sbjct: 1132 HFKASFGGAQVEECGIRLVYTEDYEQ 1157



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 22/121 (18%)

Query: 674 SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE 733
           ++ I  L  L  L L+ C+NLE LP +I +L  L TL L G SK + FP+I         
Sbjct: 696 NINIGSLKALEYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDINF------- 748

Query: 734 IHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
                    G   ++ELL      +   C+NL+SLP +I  L SL+ +  + C KL+ + 
Sbjct: 749 ---------GSLKALELL------DFSHCRNLESLPVSIYNLSSLKTLGITNCPKLEEML 793

Query: 794 E 794
           E
Sbjct: 794 E 794



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 50/221 (22%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLS--------DGTDI-------RELSLA 676
           G   VR+  P+ P   SRLWE      DI  VL         +G  I       + + L 
Sbjct: 499 GWAIVRQNFPEHPEEWSRLWE----LQDIKSVLPQNKGTKNIEGISINRSWDSKKRIQLT 554

Query: 677 IELLFGLVQLTLNGCK--------NLERLPRTI------------SALKYLSTLNLSGLS 716
            E    + +L L   K         LE LP               S +++L   N+   +
Sbjct: 555 AEAFRKMNRLRLLKVKVYFHWDNYPLEYLPSNFHVENPVELNLWYSNIEHLWEGNMP--A 612

Query: 717 KFREFPEITSSRDQLLEI-------HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           K  +  +++ SR  L++I       +LE   ++G    ++ L+G    +L +CKNL SLP
Sbjct: 613 KKLKVTDLSYSR-HLVDISNISSMQNLETLILKGCTRLLKHLNGLEELDLSNCKNLLSLP 671

Query: 770 STINGLRSLRMMYPSGCSKLKNVTE-TLGKVESLEVRLSSW 809
            +I  L SL+ +    CSKL   T   +G +++LE    SW
Sbjct: 672 DSIGSLNSLQTLDLVECSKLVGFTNINIGSLKALEYLDLSW 712


>gi|104646971|gb|ABF74109.1| disease resistance protein [Arabidopsis thaliana]
          Length = 584

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 212/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           L+L  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  ++E    L +  TSI  +P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTNIE---VLRISETSIEAIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S TAIRR   SI  +  L+ L                    N    S
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLAIG-----------------NSFYTS 362

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
              +  + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 363 EGLLHSLCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
             KL +   +   ++   ++L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 --KLDQATQI---LIHRNMKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  +S   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNSLKIH 559



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L ++P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +L+L  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                                    L  
Sbjct: 198 LENLPDTLQNLTSLETLEVSGC-----------------------------------LNV 222

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
           N   + S  + ++  S T +                AIP+ I NL  L+ L ++ N    
Sbjct: 223 NEFPRVSTNIEVLRISETSI---------------EAIPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L    L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNTRRLF---L 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           ++++ + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTNIEVL---RISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKSMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+N+P  +  ++SLE + +SG +  +    I    N R L+ S    
Sbjct: 94  KGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEI--SYNTRRLFLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  N++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLR 236



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQATQIL 488


>gi|104647005|gb|ABF74126.1| disease resistance protein [Arabidopsis thaliana]
          Length = 586

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 212/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           L+L  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  ++E    L +  TSI  +P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTNIE---VLRISETSIEAIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S TAIRR   SI  +  L+ L                    N    S
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLAIG-----------------NSFYTS 362

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
              +  + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI 
Sbjct: 363 EGLLHSLCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
             KL +   +   ++   ++L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 --KLDQATQI---LIHRNMKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  +S   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNSLKIH 559



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L ++P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +L+L  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                                    L  
Sbjct: 198 LENLPDTLQNLTSLETLEVSGC-----------------------------------LNV 222

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
           N   + S  + ++  S T +                AIP+ I NL  L+ L ++ N    
Sbjct: 223 NEFPRVSTNIEVLRISETSI---------------EAIPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L    L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNTRRLF---L 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           ++++ + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTNIEVL---RISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+N+P  +  ++SLE + +SG +  +    I    N R L+ S    
Sbjct: 94  KGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEI--SYNTRRLFLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  N++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLR 236



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-CLRKLVASNCYKLDQATQIL 488


>gi|296088756|emb|CBI38206.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 168/330 (50%), Gaps = 38/330 (11%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKN------------------- 40
           +  +K L+ L L D   +   PSSIEL   LE+L + GC N                   
Sbjct: 22  LGVLKKLTSLQLKDCQKLESFPSSIEL-ESLEVLDISGCSNFEKFPEIHGNMRHLRKIYL 80

Query: 41  ----LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
               +  LP +I  L+ L  L+L+ CS  +KFP+I   M+ L  L L GT+I E+PSSI 
Sbjct: 81  NQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIY 140

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            L GL  L L  CKNL RLPSSI  L+ L  + L GC  LE  PD +  +E++  L++ G
Sbjct: 141 HLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMG 200

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNE---PPASASWHLHLPFNLLGKSS-------CPVA 206
           T+++    SI  +K L  L  + C      P+S      L   +L   S        P+ 
Sbjct: 201 TSLKELPPSIEHLKGLEELDLTNCENLVTLPSSICNIRSLERLVLQNCSKLQELPKNPMT 260

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
           L    + G+CSL  L+LS C L   AIPSD+  L SL+ L L+ +N   +P+ IS    L
Sbjct: 261 LQCSDMIGLCSLMDLNLSGCNLMGGAIPSDLWCLSSLRRLNLSGSNIRCIPSGIS---QL 317

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRANGCS 296
             L+L  CK L+S+ ++P +L+ + A+ C+
Sbjct: 318 RILQLNHCKMLESITELPSSLRVLDAHDCT 347



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 88/155 (56%), Gaps = 11/155 (7%)

Query: 645 GNCSRLWEEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
            NCS      ++FP+I +       ++  GT I+EL  +I  L GL +L+L  CKNL RL
Sbjct: 104 ANCSNF----EKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRL 159

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P +I  L++L  + L G S    FP+I    + +  + L GT+++ LP SIE L G    
Sbjct: 160 PSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEEL 219

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           +L +C+NL +LPS+I  +RSL  +    CSKL+ +
Sbjct: 220 DLTNCENLVTLPSSICNIRSLERLVLQNCSKLQEL 254



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 96/207 (46%), Gaps = 33/207 (15%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE L L  C +L ++ SS+  LK L +L L  C KLE+ P ++ ++ESLE LD+SG 
Sbjct: 1   MPNLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSI-ELESLEVLDISGC 59

Query: 158 AIRRPTSSIFL-MKNLRSLYF--SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
           +       I   M++LR +Y   SG  E P S  +                         
Sbjct: 60  SNFEKFPEIHGNMRHLRKIYLNQSGIKELPTSIEF------------------------- 94

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           + SL  L L++C   E   P    ++ SL  L L       LP+SI  L  L EL L  C
Sbjct: 95  LESLEMLQLANCSNFE-KFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTGLRELSLYRC 153

Query: 275 KRLQSLPQIPPNLQFVRA---NGCSSL 298
           K L+ LP     L+F+     +GCS+L
Sbjct: 154 KNLRRLPSSICRLEFLHGIYLHGCSNL 180



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 62/109 (56%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L L+  S F +FPEI      L  + L GTAI+ LP+SI  L+G
Sbjct: 85  IKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLHWLVLGGTAIKELPSSIYHLTG 144

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               +L  CKNL+ LPS+I  L  L  +Y  GCS L+   + +  +E++
Sbjct: 145 LRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENI 193



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++ ++  +G T +R++  ++ +L  L  L L  C+ LE  P +I  L+ L  L++SG 
Sbjct: 1   MPNLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFPSSIE-LESLEVLDISGC 59

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           S F +FPEI  +   L +I+L  + I+ LP SIE L    +  L +C N +  P     +
Sbjct: 60  SNFEKFPEIHGNMRHLRKIYLNQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDM 119

Query: 776 RSLRMMYPSG 785
           +SL  +   G
Sbjct: 120 KSLHWLVLGG 129


>gi|104647031|gb|ABF74139.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 207/450 (46%), Gaps = 79/450 (17%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL  T I E PSSI  L+ L  L +  C+ L +LP  +  L  L++L L GC +L+  P
Sbjct: 143 LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGXLVSLKSLNLDGCRRLENLP 202

Query: 70  QIVASMEDLSKLYLDG---------------------TSIAEVPSSIELLPGLELLYLNE 108
             + ++  L  L + G                     TSI E+P+ I  L  L  L ++E
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISE 262

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPDTLG 144
            K L  LP SI+ L+SL+ L LSGC  LE+                        +P+ +G
Sbjct: 263 NKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIG 322

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            + +LE L  S T IRR   SI  +  L+ L                  P  LL      
Sbjct: 323 NLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS---- 368

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI  L 
Sbjct: 369 ---LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFXFIPASIKRLT 423

Query: 265 NLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
            L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G    C ++Y +   + S   
Sbjct: 424 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISG----CFNQYFLRKLVAS-NC 478

Query: 324 LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV 383
            + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P    + 
Sbjct: 479 YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS-ESS 533

Query: 384 NKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           + ++GF+ C +  V     G Y  ++   H
Sbjct: 534 SDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGXLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I   P+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGXLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 638 RQSPQEPGNCSRLW---EEADEFPDIVQVLS--------DGTDIRELSLAIELLFGLVQL 686
           +  P+   N  RL+    + +EFP  +  LS        D   +R L   +  L  L  L
Sbjct: 131 KHFPEISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGXLVSLKSL 190

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
            L+GC+ LE LP T+  L  L TL +SG     EFP +++S + L    +  T+I  +PA
Sbjct: 191 NLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVL---RISETSIEEIPA 247

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            I  LS     ++ + K L SLP +I+ LRSL  +  SGCS L++
Sbjct: 248 RICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLES 292



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 124/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS +  L
Sbjct: 151 EEFPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGXL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFXFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-FLRKLVASNCYKLDQAAQIL 488


>gi|359495274|ref|XP_002276409.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1135

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 151/460 (32%), Positives = 214/460 (46%), Gaps = 73/460 (15%)

Query: 48   ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYL 106
            I  L+ L+ ++LS    L + P   + + +L +L L+G  S+ +V  S+ +L  L  L L
Sbjct: 630  IKVLEKLKVVDLSHSKSLIETPDF-SRVPNLERLVLEGCISLHKVHPSLGVLNKLNFLSL 688

Query: 107  NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
              C+ L  LPSS+  LKSL+T  LSGC +LE+ P+  G +E L+EL   G  +R   SS 
Sbjct: 689  KNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSF 748

Query: 167  FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
             L++NL  L F GC  PP S SW L        +SS     +L  L+G+ SLT+L+L  C
Sbjct: 749  SLLRNLEILSFKGCRGPP-STSWLLP------RRSSSSTGSILHHLSGLYSLTRLNLGYC 801

Query: 227  GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
             L +    S +  L SL+ L L+ NNFVTLP +I GL +LE L LE CKRLQ LP++P +
Sbjct: 802  NLSDETNLSSLCLLSSLEVLGLSGNNFVTLP-NIRGLSSLEGLLLEKCKRLQILPELPSS 860

Query: 287  LQFVRANGCSSL-----VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ 341
            +  + A  C SL       L       +S      C                        
Sbjct: 861  IYSLIAQDCISLENASNQVLKSLFPTAKSPKKTFKC------------------------ 896

Query: 342  AVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV---- 397
              +   H + ++  GS+IP W  YQ+ G  +    P   YN N ++G A+  V  V    
Sbjct: 897  --NSGAHLIYVMVYGSRIPDWIRYQSSGCEVEADLPPNWYNSN-LLGLALSFVTYVFASN 953

Query: 398  ---PKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF--LPRHGH 452
               P   T  Y   SY A+ +    D  G G              DH+WLL+  LP   +
Sbjct: 954  VIIPVSYTLRYSTSSYIANRISIRCDKEGVG-------------LDHVWLLYIKLPLFSN 1000

Query: 453  -------NWQFESNLIRLSFRS-ISDPTWKVKRCGFHPIY 484
                   NW  E   I +SF + +      +KRCGF  +Y
Sbjct: 1001 WHNGTPINWH-EVTHISVSFGTQVMGWYPPIKRCGFDLVY 1039



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 1/107 (0%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G   + ++  ++ +L  L  L+L  C+ L+ LP ++  LK L T  LSG S
Sbjct: 657 PNLERLVLEGCISLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCS 716

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           +  +FPE   + + L E+H +G  +R LP+S  LL    + + K C+
Sbjct: 717 RLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLLRNLEILSFKGCR 763



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV L+++   ++ RL + I  L+ L  ++LS      E P+  S    L  + LEG  ++
Sbjct: 613 LVHLSMH-YSHINRLWKGIKVLEKLKVVDLSHSKSLIETPDF-SRVPNLERLVLEGCISL 670

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  S+ +L+     +LK+C+ LKSLPS++  L+SL     SGCS+L++  E  G +E 
Sbjct: 671 HKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEM 730

Query: 802 LE 803
           L+
Sbjct: 731 LK 732


>gi|104646927|gb|ABF74087.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646941|gb|ABF74094.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646945|gb|ABF74096.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646947|gb|ABF74097.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646953|gb|ABF74100.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646955|gb|ABF74101.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646957|gb|ABF74102.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646963|gb|ABF74105.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646969|gb|ABF74108.1| disease resistance protein [Arabidopsis thaliana]
 gi|104646993|gb|ABF74120.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647013|gb|ABF74130.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647015|gb|ABF74131.1| disease resistance protein [Arabidopsis thaliana]
 gi|104647029|gb|ABF74138.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 207/450 (46%), Gaps = 79/450 (17%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL  T I E PSSI  L+ L  L +  C+ L +LP  +  L  L++L L GC +L+  P
Sbjct: 143 LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 70  QIVASMEDLSKLYLDG---------------------TSIAEVPSSIELLPGLELLYLNE 108
             + ++  L  L + G                     TSI E+P+ I  L  L  L ++E
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISE 262

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPDTLG 144
            K L  LP SI+ L+SL+ L LSGC  LE+                        +P+ +G
Sbjct: 263 NKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIG 322

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            + +LE L  S T IRR   SI  +  L+ L                  P  LL      
Sbjct: 323 NLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS---- 368

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI  L 
Sbjct: 369 ---LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIKRLT 423

Query: 265 NLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
            L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G    C ++Y +   + S   
Sbjct: 424 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISG----CFNQYFLRKLVAS-NC 478

Query: 324 LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV 383
            + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P    + 
Sbjct: 479 YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS-ESS 533

Query: 384 NKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           + ++GF+ C +  V     G Y  ++   H
Sbjct: 534 SDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I   P+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 638 RQSPQEPGNCSRLW---EEADEFPDIVQVLS--------DGTDIRELSLAIELLFGLVQL 686
           +  P+   N  RL+    + +EFP  +  LS        D   +R L   +  L  L  L
Sbjct: 131 KHFPEISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSL 190

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
            L+GC+ LE LP T+  L  L TL +SG     EFP +++S + L    +  T+I  +PA
Sbjct: 191 NLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVL---RISETSIEEIPA 247

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            I  LS     ++ + K L SLP +I+ LRSL  +  SGCS L++
Sbjct: 248 RICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLES 292



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EEFPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-FLRKLVASNCYKLDQAAQIL 488


>gi|297740941|emb|CBI31253.3| unnamed protein product [Vitis vinifera]
          Length = 1426

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 203/506 (40%), Gaps = 126/506 (24%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--------------------- 40
             +MK L  L LD T+I E+P+SI  +T LE+L+L+ C                       
Sbjct: 889  GNMKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRE 948

Query: 41   --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
              +  LP +I  L+ L  L+LS CSK +KF +I  +M+ L  LYL  T+I E+P+SI  L
Sbjct: 949  SGIKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCL 1008

Query: 99   PGLELLYLNECKNLVRLPS----------------------------------------- 117
              LE+L L+ C NL RLP                                          
Sbjct: 1009 QDLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRN 1068

Query: 118  -----SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
                  I GLKSLK L + GC  LE   +    +E L+ L +  T I    SSI  ++ L
Sbjct: 1069 LRSLPDICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGL 1128

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-----------LTKL 221
             SL    C    A       LP + +G  +C   L + + T + +           L KL
Sbjct: 1129 DSLELINCKNLVA-------LPIS-IGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKL 1180

Query: 222  DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            DL  C L E  IPSD+  L SL+ LY++ N+   +PA I+ L  L+ L +  C  L+ + 
Sbjct: 1181 DLGGCNLMEGEIPSDLWCLSSLESLYVSENHIRCIPAGITQLFKLKTLNMNHCPMLKEIG 1240

Query: 282  QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ 341
            ++P +L ++ A GC  L T   +  L  S                       L +Y +  
Sbjct: 1241 ELPSSLTYMEARGCPCLETETFSSPLWSS-----------------------LLKYFKSA 1277

Query: 342  AVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
              S        V PGS  IP+W  +Q  G  + +  P   Y  N  +GF +         
Sbjct: 1278 IQSTFFGPRRFVIPGSSGIPEWVSHQRIGCEVRIELPMNWYEDNNFLGFVL--------- 1328

Query: 401  STGTYLFHSYPAHELECSMDGSGEGH 426
                  FH  P    EC        H
Sbjct: 1329 -----FFHHVPLDNDECETTEGSTAH 1349



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 144/318 (45%), Gaps = 29/318 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G TS+ E+ SSI  L  L  L L+GC+ L S P  +   + L  L L
Sbjct: 676 FSSMPNLERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMK-FESLEVLCL 734

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C KLKK P+I+ +M  L KL L+G+ I E+P SI  L  LE+L L+ C    + P   
Sbjct: 735 NQCRKLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIR 794

Query: 120 NGLKSLKTLNLS-----------------------GCCKLENVPDTLGKVESLEELDVSG 156
             +K LK L+L                         C K E   D    +  L  L++  
Sbjct: 795 GNMKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRE 854

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGV 215
           + I+    SI  ++ L  L  S C++         ++     L      +  +  S+  V
Sbjct: 855 SGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSV 914

Query: 216 CSLTKLDLSDCGLGEAAIPSDI-DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
            SL  L L  C   E    SD+  N+  L+ L L  +    LP SI  L +L +L+L +C
Sbjct: 915 TSLEILSLRKCSKFEKF--SDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNC 972

Query: 275 KRLQSLPQIPPNLQFVRA 292
            + +   +I  N++F+R 
Sbjct: 973 SKFEKFSEIQWNMKFLRV 990



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 27/183 (14%)

Query: 647  CSRLWEEADEFPDI--VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLER------- 696
            CS+  + +D F ++  +Q+L+   + I+EL  +I  L  L+QL L+ C   E+       
Sbjct: 925  CSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWN 984

Query: 697  ----------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                            LP +I  L+ L  L+L G S     PEI      L  + L GTA
Sbjct: 985  MKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTA 1044

Query: 741  IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
            I+GLP SI   +G     L++C+NL+SLP  I GL+SL+ ++  GCS L+  +E    +E
Sbjct: 1045 IKGLPCSIRYFTGLHHLTLENCRNLRSLPD-ICGLKSLKGLFIIGCSNLEAFSEITEDME 1103

Query: 801  SLE 803
             L+
Sbjct: 1104 QLK 1106



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 76/151 (50%), Gaps = 1/151 (0%)

Query: 646  NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
            N  RL E   +  ++  +   GT I+ L  +I    GL  LTL  C+NL  LP  I  LK
Sbjct: 1021 NLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLP-DICGLK 1079

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             L  L + G S    F EIT   +QL  + L  T I  LP+SIE L G     L +CKNL
Sbjct: 1080 SLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNL 1139

Query: 766  KSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             +LP +I  L  L ++    C+KL N+ + L
Sbjct: 1140 VALPISIGSLTCLTILRVRNCTKLHNLPDNL 1170



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 23/134 (17%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI----- 748
           ++ LP +I  L++L  L+LS  SKF +FPEI  +  +L  + L+ TAI+ LP SI     
Sbjct: 857 IKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTS 916

Query: 749 -ELLS----------GNILSNLKDCK-------NLKSLPSTINGLRSLRMMYPSGCSKLK 790
            E+LS           ++ +N++  +        +K LP +I  L SL  +  S CSK +
Sbjct: 917 LEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFE 976

Query: 791 NVTETLGKVESLEV 804
             +E    ++ L V
Sbjct: 977 KFSEIQWNMKFLRV 990



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 8/128 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L GC +L  L  +I  LK L+ LNL G  + + FP  T+ + + LE+ L     R
Sbjct: 682 LERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFP--TNMKFESLEV-LCLNQCR 738

Query: 743 GLPASIELLSGNILSNLKDCKN---LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            L    ++L GN+    K C N   +K LP +I  L SL ++  S CSK +   E  G +
Sbjct: 739 KLKKIPKIL-GNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNM 797

Query: 800 ESLEVRLS 807
           + L+ RLS
Sbjct: 798 KCLK-RLS 804



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 46/219 (21%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEAD--------EFPDIVQVLS-DGTDIRELSLAIEL 679
           ++ G   VR + P++P   SRLW+  D        E  + +Q +S D +  +E+  + E+
Sbjct: 516 QEMGYAIVREECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSRSKEIQFSTEV 575

Query: 680 LFGLVQLTL-----NGCKNLER------LPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
              + QL L     N    L R      LP+       L  ++    +  R  P  +   
Sbjct: 576 FATMKQLRLLKIYCNDRDGLTREEYRVHLPKDFEFPHDLRYIHWQRCT-LRSLPS-SFCG 633

Query: 729 DQLLEIHLEGTAIRGL---PASIELLSGNILS--------------------NLKDCKNL 765
           +QL+EI+L+ + I+ L      +E L G  LS                    NL+ C +L
Sbjct: 634 EQLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGCTSL 693

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             L S+I  L+ L  +   GC +L++    + K ESLEV
Sbjct: 694 CELHSSIGDLKQLTYLNLRGCEQLQSFPTNM-KFESLEV 731


>gi|359495250|ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 203/506 (40%), Gaps = 126/506 (24%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--------------------- 40
             +MK L  L LD T+I E+P+SI  +T LE+L+L+ C                       
Sbjct: 821  GNMKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRE 880

Query: 41   --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
              +  LP +I  L+ L  L+LS CSK +KF +I  +M+ L  LYL  T+I E+P+SI  L
Sbjct: 881  SGIKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCL 940

Query: 99   PGLELLYLNECKNLVRLPS----------------------------------------- 117
              LE+L L+ C NL RLP                                          
Sbjct: 941  QDLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRN 1000

Query: 118  -----SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
                  I GLKSLK L + GC  LE   +    +E L+ L +  T I    SSI  ++ L
Sbjct: 1001 LRSLPDICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGL 1060

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-----------LTKL 221
             SL    C    A       LP + +G  +C   L + + T + +           L KL
Sbjct: 1061 DSLELINCKNLVA-------LPIS-IGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKL 1112

Query: 222  DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            DL  C L E  IPSD+  L SL+ LY++ N+   +PA I+ L  L+ L +  C  L+ + 
Sbjct: 1113 DLGGCNLMEGEIPSDLWCLSSLESLYVSENHIRCIPAGITQLFKLKTLNMNHCPMLKEIG 1172

Query: 282  QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ 341
            ++P +L ++ A GC  L T   +  L  S                       L +Y +  
Sbjct: 1173 ELPSSLTYMEARGCPCLETETFSSPLWSS-----------------------LLKYFKSA 1209

Query: 342  AVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
              S        V PGS  IP+W  +Q  G  + +  P   Y  N  +GF +         
Sbjct: 1210 IQSTFFGPRRFVIPGSSGIPEWVSHQRIGCEVRIELPMNWYEDNNFLGFVL--------- 1260

Query: 401  STGTYLFHSYPAHELECSMDGSGEGH 426
                  FH  P    EC        H
Sbjct: 1261 -----FFHHVPLDNDECETTEGSTAH 1281



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 144/318 (45%), Gaps = 29/318 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G TS+ E+ SSI  L  L  L L+GC+ L S P  +   + L  L L
Sbjct: 608 FSSMPNLERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMK-FESLEVLCL 666

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C KLKK P+I+ +M  L KL L+G+ I E+P SI  L  LE+L L+ C    + P   
Sbjct: 667 NQCRKLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIR 726

Query: 120 NGLKSLKTLNLS-----------------------GCCKLENVPDTLGKVESLEELDVSG 156
             +K LK L+L                         C K E   D    +  L  L++  
Sbjct: 727 GNMKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFSDVFTNMRRLLILNLRE 786

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGV 215
           + I+    SI  ++ L  L  S C++         ++     L      +  +  S+  V
Sbjct: 787 SGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSV 846

Query: 216 CSLTKLDLSDCGLGEAAIPSDI-DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
            SL  L L  C   E    SD+  N+  L+ L L  +    LP SI  L +L +L+L +C
Sbjct: 847 TSLEILSLRKCSKFEKF--SDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNC 904

Query: 275 KRLQSLPQIPPNLQFVRA 292
            + +   +I  N++F+R 
Sbjct: 905 SKFEKFSEIQWNMKFLRV 922



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 27/183 (14%)

Query: 647  CSRLWEEADEFPDI--VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLER------- 696
            CS+  + +D F ++  +Q+L+   + I+EL  +I  L  L+QL L+ C   E+       
Sbjct: 857  CSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWN 916

Query: 697  ----------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                            LP +I  L+ L  L+L G S     PEI      L  + L GTA
Sbjct: 917  MKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTA 976

Query: 741  IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
            I+GLP SI   +G     L++C+NL+SLP  I GL+SL+ ++  GCS L+  +E    +E
Sbjct: 977  IKGLPCSIRYFTGLHHLTLENCRNLRSLPD-ICGLKSLKGLFIIGCSNLEAFSEITEDME 1035

Query: 801  SLE 803
             L+
Sbjct: 1036 QLK 1038



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 76/151 (50%), Gaps = 1/151 (0%)

Query: 646  NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
            N  RL E   +  ++  +   GT I+ L  +I    GL  LTL  C+NL  LP  I  LK
Sbjct: 953  NLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLP-DICGLK 1011

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             L  L + G S    F EIT   +QL  + L  T I  LP+SIE L G     L +CKNL
Sbjct: 1012 SLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDSLELINCKNL 1071

Query: 766  KSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             +LP +I  L  L ++    C+KL N+ + L
Sbjct: 1072 VALPISIGSLTCLTILRVRNCTKLHNLPDNL 1102



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 23/134 (17%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI----- 748
           ++ LP +I  L++L  L+LS  SKF +FPEI  +  +L  + L+ TAI+ LP SI     
Sbjct: 789 IKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGNMKRLKRLSLDETAIKELPNSIGSVTS 848

Query: 749 -ELLS----------GNILSNLKDCK-------NLKSLPSTINGLRSLRMMYPSGCSKLK 790
            E+LS           ++ +N++  +        +K LP +I  L SL  +  S CSK +
Sbjct: 849 LEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQLDLSNCSKFE 908

Query: 791 NVTETLGKVESLEV 804
             +E    ++ L V
Sbjct: 909 KFSEIQWNMKFLRV 922



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 24/196 (12%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEAD--------EFPDIVQVLS-DGTDIRELSLAIEL 679
           ++ G   VR + P++P   SRLW+  D        E  + +Q +S D +  +E+  + E+
Sbjct: 494 QEMGYAIVREECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSRSKEIQFSTEV 553

Query: 680 LF-----------GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
                         L+++ L    N++RL +    L+ L  ++LS   +  + PE  SS 
Sbjct: 554 CTLRSLPSSFCGEQLIEINLKS-SNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEF-SSM 611

Query: 729 DQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             L  ++LEG T++  L +SI  L      NL+ C+ L+S P+ +    SL ++  + C 
Sbjct: 612 PNLERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNMK-FESLEVLCLNQCR 670

Query: 788 KLKNVTETLGKVESLE 803
           KLK + + LG +  L+
Sbjct: 671 KLKKIPKILGNMGHLK 686



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 8/128 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L GC +L  L  +I  LK L+ LNL G  + + FP  T+ + + LE+ L     R
Sbjct: 614 LERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFP--TNMKFESLEV-LCLNQCR 670

Query: 743 GLPASIELLSGNILSNLKDCKN---LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            L    ++L GN+    K C N   +K LP +I  L SL ++  S CSK +   E  G +
Sbjct: 671 KLKKIPKIL-GNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEIRGNM 729

Query: 800 ESLEVRLS 807
           + L+ RLS
Sbjct: 730 KCLK-RLS 736


>gi|104646975|gb|ABF74111.1| disease resistance protein [Arabidopsis thaliana]
          Length = 585

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 207/450 (46%), Gaps = 79/450 (17%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL  T I E PSSI  L+ L  L +  C+ L +LP  +  L  L++L L GC +L+  P
Sbjct: 143 LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 70  QIVASMEDLSKLYLDG---------------------TSIAEVPSSIELLPGLELLYLNE 108
             + ++  L  L + G                     TSI E+P+ I  L  L  L ++E
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISE 262

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPDTLG 144
            K L  LP SI+ L+SL+ L LSGC  LE+                        +P+ +G
Sbjct: 263 NKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIG 322

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            + +LE L  S T IRR   SI  +  L+ L                  P  LL      
Sbjct: 323 NLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS---- 368

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              + P L+    L  L LS+  + E  IP+ I NL +L EL L+ NNF  +PASI  L 
Sbjct: 369 ---LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWNLLELDLSGNNFEFIPASIKRLT 423

Query: 265 NLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
            L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G    C ++Y +   + S   
Sbjct: 424 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISG----CFNQYFLRKLVAS-NC 478

Query: 324 LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV 383
            + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P    + 
Sbjct: 479 YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS-ESS 533

Query: 384 NKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           + ++GF+ C +  V     G Y  ++   H
Sbjct: 534 SDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I   P+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 638 RQSPQEPGNCSRLW---EEADEFPDIVQVLS--------DGTDIRELSLAIELLFGLVQL 686
           +  P+   N  RL+    + +EFP  +  LS        D   +R L   +  L  L  L
Sbjct: 131 KHFPEISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSL 190

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
            L+GC+ LE LP T+  L  L TL +SG     EFP +++S + L    +  T+I  +PA
Sbjct: 191 NLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVL---RISETSIEEIPA 247

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            I  LS     ++ + K L SLP +I+ LRSL  +  SGCS L++
Sbjct: 248 RICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EEFPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L   ++TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMNMTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-FLRKLVASNCYKLDQAAQIL 488


>gi|105923235|gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 189/412 (45%), Gaps = 49/412 (11%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
            L  L+ L LS    L   P  +  +  L ++ L+G TS+ EV  SI  L  L LL L  C
Sbjct: 709  LNRLKILNLSYSVHLSTPPHFMG-LPCLERIILEGCTSLVEVHQSIGHLDSLTLLNLEGC 767

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            K+L  LP SI  LK L++LN+S C  LE +PD LG +E+L  L   GTAI R  SSI  +
Sbjct: 768  KSLKNLPESICYLKCLESLNISRCINLEKLPDQLGDMEALTMLLADGTAIERLPSSIGHL 827

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
            KNL +L   G     +S SW  H+   L  + S P AL LP+ TG+ SL +LDLS CGL 
Sbjct: 828  KNLSNLSLGGFKYDLSSVSWFSHILPWLSPRISNPRAL-LPTFTGLNSLRRLDLSYCGLS 886

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
            +    +D+  L SL+EL   RN    LP  I  L  L+ L L  C  L S+  +P  L  
Sbjct: 887  DG---TDLGGLSSLQELNFTRNKLNNLPNGIDRLPELQVLCLYHCADLLSISDLPSTLHS 943

Query: 290  VRANGCSSLVTLFGALKLCRSKYTIINC-----IDSLKLLRKNGLAI-----SMLREYLE 339
            +    C+S+  L    K     Y ++NC     I  L  +    L        +   +  
Sbjct: 944  LMVYHCTSIERLSIHSKNVPDMY-LVNCQQLSDIQGLGSVGNKPLIYVDNCSKLANNFKS 1002

Query: 340  LQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ--- 396
            L   S  G  L I    S+IP WF ++ +GSSI+   P     +  ++ + +C   +   
Sbjct: 1003 LLQASFKGEHLDICLRDSEIPDWFSHRGDGSSISFYVPD--SEIQGLIVWIVCGASERRL 1060

Query: 397  --------VPKHSTGTYLFH---------SYPAHE----------LECSMDG 421
                    +   S G  LFH         S PA+           L C+M+G
Sbjct: 1061 PLPYASATIRNKSKGVRLFHWSTFIPLYYSKPAYHSWVNYVTFSRLPCAMEG 1112



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 97/198 (48%), Gaps = 24/198 (12%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  + L+G TS+ EV  SI  L  L LL L+GCK+L +LP +I  LKCL +L +S C  L
Sbjct: 735 LERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCKSLKNLPESICYLKCLESLNISRCINL 794

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--------------- 110
           +K P  +  ME L+ L  DGT+I  +PSSI  L  L  L L   K               
Sbjct: 795 EKLPDQLGDMEALTMLLADGTAIERLPSSIGHLKNLSNLSLGGFKYDLSSVSWFSHILPW 854

Query: 111 ------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
                 N   L  +  GL SL+ L+LS  C L +  D LG + SL+EL+ +   +    +
Sbjct: 855 LSPRISNPRALLPTFTGLNSLRRLDLS-YCGLSDGTD-LGGLSSLQELNFTRNKLNNLPN 912

Query: 165 SIFLMKNLRSLYFSGCNE 182
            I  +  L+ L    C +
Sbjct: 913 GIDRLPELQVLCLYHCAD 930



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 99/244 (40%), Gaps = 62/244 (25%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEAD--------------------------------E 656
           +  GR+ +R  SP  PG   RL  + D                                 
Sbjct: 672 RDMGREIIREMSPDHPGKRRRLCFQKDVLDALRKKMFLNRLKILNLSYSVHLSTPPHFMG 731

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P + +++ +G T + E+  +I  L  L  L L GCK+L+ LP +I  LK L +LN+S  
Sbjct: 732 LPCLERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCKSLKNLPESICYLKCLESLNISRC 791

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK--------------- 760
               + P+     + L  +  +GTAI  LP+SI  L    LSNL                
Sbjct: 792 INLEKLPDQLGDMEALTMLLADGTAIERLPSSIGHLKN--LSNLSLGGFKYDLSSVSWFS 849

Query: 761 --------DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRP 812
                      N ++L  T  GL SLR +  S C  L + T+ LG + SL+    ++ R 
Sbjct: 850 HILPWLSPRISNPRALLPTFTGLNSLRRLDLSYCG-LSDGTD-LGGLSSLQEL--NFTRN 905

Query: 813 KMQN 816
           K+ N
Sbjct: 906 KLNN 909



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 28/188 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           +  M+ L+ L  DGT+I  +PSSI  L  L  L+L G K                     
Sbjct: 801 LGDMEALTMLLADGTAIERLPSSIGHLKNLSNLSLGGFKYDLSSVSWFSHILPWLSPRIS 860

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
           N  +L  T + L  LR L+LS C         +  +  L +L      +  +P+ I+ LP
Sbjct: 861 NPRALLPTFTGLNSLRRLDLSYCGLSDGTD--LGGLSSLQELNFTRNKLNNLPNGIDRLP 918

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL----ENVPDT-LGKVESLEELDV 154
            L++L L  C +L+ +    + L SL   + +   +L    +NVPD  L   + L ++  
Sbjct: 919 ELQVLCLYHCADLLSISDLPSTLHSLMVYHCTSIERLSIHSKNVPDMYLVNCQQLSDIQG 978

Query: 155 SGTAIRRP 162
            G+   +P
Sbjct: 979 LGSVGNKP 986


>gi|105922695|gb|ABF81431.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105923067|gb|ABF81454.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 918

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/181 (49%), Positives = 121/181 (66%), Gaps = 2/181 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 570 LTGILNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRILPNNLE-MESLKVCTL 628

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M  L+ L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 629 DGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSI 688

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+ +P+ LGKVESLEE DVSGT+IR+  +SIFL+KNL+ L   G
Sbjct: 689 GCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDG 748

Query: 180 C 180
           C
Sbjct: 749 C 749



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 78/117 (66%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L+ L LD T IT++ SSI  L GL LL++  CKNL S+P +I  LK L+ L+LS
Sbjct: 641 VGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLS 700

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
           GCS+LK  P+ +  +E L +  + GTSI ++P+SI LL  L++L  + C+ + +LPS
Sbjct: 701 GCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLPS 757



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 112/230 (48%), Gaps = 28/230 (12%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ + LS    L K P +   + +L  L L+G TS++EV  S+     L+ + L +CK++
Sbjct: 553 LKIINLSNSLNLIKTPDLTGIL-NLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSI 611

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP+++  ++SLK   L GC KLE  PD +G +  L  L +  T I +  SSI      
Sbjct: 612 RILPNNLE-MESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSI------ 664

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEA 231
                            H  +   LL  +SC     +PS  G + SL KLDLS C     
Sbjct: 665 -----------------HHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCS-ELK 706

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            IP ++  + SL+E  ++  +   LPASI  L NL+ L  + C+R+  LP
Sbjct: 707 YIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSSDGCERIAKLP 756



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 11/131 (8%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I +L  +I  L GL  L++N CKNLE +P 
Sbjct: 631 CSKL----EKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLLSMNSCKNLESIPS 686

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  LK L  L+LSG S+ +  PE     + L E  + GT+IR LPASI LL    + + 
Sbjct: 687 SIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASIFLLKNLKVLSS 746

Query: 760 KDCKNLKSLPS 770
             C+ +  LPS
Sbjct: 747 DGCERIAKLPS 757



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L    L G SK  +FP+I  + + L  + L+ T I 
Sbjct: 600 LQYVNLVKCKSIRILPNNLE-MESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGIT 658

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  L G  L ++  CKNL+S+PS+I  L+SL+ +  SGCS+LK + E LGKVESL
Sbjct: 659 KLCSSIHHLIGLGLLSMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESL 718

Query: 803 E 803
           E
Sbjct: 719 E 719



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 166/384 (43%), Gaps = 48/384 (12%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKLKK 67
           ++LD   I E   +++  + +  L L    N  LS  P  +S+   LR LE +     K 
Sbjct: 464 IFLDMPGIKEAQWNMKAFSKMSRLRLLKIHNVQLSEGPEALSNE--LRFLEWNSYPS-KS 520

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P     M++L +L++  +SI ++    +    L+++ L+   NL++ P  + G+ +L++
Sbjct: 521 LPACF-QMDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPD-LTGILNLES 578

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           L L GC  L  V  +L   + L+ +++      R   +   M++L+     GC++     
Sbjct: 579 LILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRILPNNLEMESLKVCTLDGCSK----- 633

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
              L    +++G  +C   L L   TG+  L                S I +L  L  L 
Sbjct: 634 ---LEKFPDIVGNMNCLTVLCLDE-TGITKLC---------------SSIHHLIGLGLLS 674

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
           +N   N  ++P+SI  L +L++L+L  C  L+    IP NL  V      SL     +  
Sbjct: 675 MNSCKNLESIPSSIGCLKSLKKLDLSGCSELK---YIPENLGKV-----ESLEEFDVSGT 726

Query: 307 LCRSKYTIINCIDSLKLLRKNGLA-ISMLREYLELQAVSDPGHKLSIVFPGSQIPKW--- 362
             R     I  + +LK+L  +G   I+ L  Y     +S+P     I  PG++IP W   
Sbjct: 727 SIRQLPASIFLLKNLKVLSSDGCERIAKLPSY---SGLSNPRPGFGIAIPGNEIPGWFNH 783

Query: 363 -FMYQNEGSSITVTRPSYLYNVNK 385
            F Y  E S I     SY    +K
Sbjct: 784 QFFYDVEQSKIDDRTKSYTIVFDK 807



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 424 GKEIVRCESPEEPGRRSRLW----TYKDVCLALMDNTGKEK----IEAIF----LDMPGI 471

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S+                     D+L
Sbjct: 472 KEAQWNMKAFSKMSRLRLLKIHNV-QLSEGPEALSNELRFLEWNSYPSKSLPACFQMDEL 530

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +  NL   P  + G+ +L  +   GC+ L  
Sbjct: 531 VELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPD-LTGILNLESLILEGCTSLSE 589

Query: 792 VTETLGKVESLE 803
           V  +L   + L+
Sbjct: 590 VHPSLAHHKKLQ 601


>gi|356499237|ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1176

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 164/547 (29%), Positives = 243/547 (44%), Gaps = 102/547 (18%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L +   ++ EV  S+     L +L +K CKNL  +P  +  +  L  L LSGCSK+KK P
Sbjct: 654  LLIGCINLVEVHPSVGQHKRLVVLCMKNCKNLQIMPRKLE-MDSLEELILSGCSKVKKLP 712

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            +   +M+ LS                       LL +  C NL+ LP+SI  LKSL+ LN
Sbjct: 713  EFGKNMKSLS-----------------------LLSVENCINLLCLPNSICNLKSLRKLN 749

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            +SGC +L  +P+ L + ESLEELDVSGTAIR  T S   ++ L+ L F G  E  A  S 
Sbjct: 750  ISGCSRLSTLPNGLNENESLEELDVSGTAIREITLSKVRLEKLKELSFGGRKEL-APNSQ 808

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            +L L  +   +        +P L+ + +L  LDLS C L + + PS + +L  L++L L+
Sbjct: 809  NLLLWISKFMRQPNLKESTMPPLSSLLALVSLDLSYCDLNDESFPSHLGSLSLLQDLDLS 868

Query: 250  RNNFVTLPAS-ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
             NNFV  PA  I  L  L+ L   DC RL+SLP +PPNLQ + AN C  L          
Sbjct: 869  GNNFVNPPAQCIINLSMLQNLSFNDCPRLESLPVLPPNLQGLYANNCPKL---------- 918

Query: 309  RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP--GHKLSIVFPGSQIPKWFMYQ 366
                            +   L   ML +  E Q+  DP  G ++  + PG++IP WF  Q
Sbjct: 919  ----------------KPFNLDEEMLWKIYETQSRMDPIEGPEVWFIIPGNEIPCWFDNQ 962

Query: 367  N-----------------EGSSITVTRPSYLYNVNKVVGFAICCVFQ----VPKHSTGTY 405
            N                   +SITV  P     ++K  G A+C V +      + S+ +Y
Sbjct: 963  NCLAIDSSHHPYDKLGCDSVTSITVDVPKDC-QLSKWWGIAVCLVLEPSNMEEEDSSRSY 1021

Query: 406  LFHSYPAHELECSMD----------------GSGEGHYIY-FRGKFGHVV---SDHLWLL 445
            +  +   +E  C                    S  GH +Y     + H++   +DH   +
Sbjct: 1022 VRPTSTGNEEMCIYYWVCKAPDRDPDPKFPIASKFGHLVYKLNDPYIHIIFLSADH---V 1078

Query: 446  FLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCN 505
            ++  +    Q +  LI             +K+CG   +   ++EE+    K S       
Sbjct: 1079 YIQHYLSGEQIQLQLIFFVENCSKSCKATIKKCGCRVVCKEKIEEW---RKHSDGLNISR 1135

Query: 506  LNEVHHD 512
            L EV+ D
Sbjct: 1136 LTEVNDD 1142



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 4   MKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           M  L +L L G S + ++P   + +  L LL+++ C NL  LP +I +LK LR L +SGC
Sbjct: 694 MDSLEELILSGCSKVKKLPEFGKNMKSLSLLSVENCINLLCLPNSICNLKSLRKLNISGC 753

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           S+L   P  +   E L +L + GT+I E+  S   L  L+ L     K L   P+S N L
Sbjct: 754 SRLSTLPNGLNENESLEELDVSGTAIREITLSKVRLEKLKELSFGGRKELA--PNSQNLL 811



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 24/121 (19%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L +  CKNL+ +PR +  +  L  L LSG SK ++ PE              G  ++
Sbjct: 674 LVVLCMKNCKNLQIMPRKLE-MDSLEELILSGCSKVKKLPEF-------------GKNMK 719

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               S+ LLS      +++C NL  LP++I  L+SLR +  SGCS+L  +   L + ESL
Sbjct: 720 ----SLSLLS------VENCINLLCLPNSICNLKSLRKLNISGCSRLSTLPNGLNENESL 769

Query: 803 E 803
           E
Sbjct: 770 E 770



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LS  + +++L    + +  L  L++  C NL  LP +I  LK L  LN+SG S+    P
Sbjct: 701 ILSGCSKVKKLPEFGKNMKSLSLLSVENCINLLCLPNSICNLKSLRKLNISGCSRLSTLP 760

Query: 723 EITSSRDQLLEIHLEGTAIRGLPAS 747
              +  + L E+ + GTAIR +  S
Sbjct: 761 NGLNENESLEELDVSGTAIREITLS 785


>gi|356517237|ref|XP_003527295.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1098

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 221/473 (46%), Gaps = 65/473 (13%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            LE L L+GC  L  + +++   + L +L L  C  L K P+    +  L  L L+G   +
Sbjct: 666  LESLDLEGCIQLEEIGLSVVLSRKLTSLNLRNCKSLIKLPRFGEDLI-LKNLDLEGCKKL 724

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP--DTLGKV 146
              +  SI LL  LE L L  CKNLV LP+SI GL SL+ L LSGC KL N      L   
Sbjct: 725  RHIDPSIGLLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILSGCSKLYNTELFYELRDA 784

Query: 147  ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
            E L+++D+ G  I   ++S +  ++ +S                              V+
Sbjct: 785  EQLKKIDIDGAPIHFQSTSSYSRQHQKS------------------------------VS 814

Query: 207  LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
             ++PS      ++KLDLS C L E  IP  I  +  L+ L L+ NNF TLP ++  L  L
Sbjct: 815  CLMPSSPIFPCMSKLDLSFCNLVE--IPDAIGIMSCLERLDLSGNNFATLP-NLKKLSKL 871

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
              L+L+ CK+L+SLP++P  + FV          L+   +  ++   I NC + +   R 
Sbjct: 872  VCLKLQHCKQLKSLPELPSRIGFVTK-------ALYYVPR--KAGLYIFNCPELVDRERC 922

Query: 327  NGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKV 386
              +  S + +  + Q      +K+  V PGS+I +W   ++EG+ +++     +++ N  
Sbjct: 923  TDMGFSWMMQLCQYQV----KYKIESVSPGSEIRRWLNNEHEGNCVSLDASPVMHDHN-W 977

Query: 387  VGFAICCVFQVPKHSTGTYLFH--SYPAHEL-ECSMDGSGEGHYIYFRGKFGHVVSDHLW 443
            +G A C +F VP  +     F    YP H   +  +D  G+        K     SDH+W
Sbjct: 978  IGVAFCAIFVVPHETLSAMSFSETEYPFHLFGDIRVDLYGDLDLELVLDK-----SDHMW 1032

Query: 444  LLFLPRHGHNWQF---ESNLIRLSFRS---ISDPTWKVKRCGFHPIYMHEVEE 490
            L F+ RH     F   +  L RL  R    + +   +VK+ G+  +Y  ++E+
Sbjct: 1033 LFFVNRHDIIADFHLKDKYLGRLVSRYDGVLKESYAEVKKYGYRWLYKGDIEQ 1085



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 7/150 (4%)

Query: 646 NCSRLWEEADEFPDIVQVL--SDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           N  +LWE     P+ ++ L  S   ++ ++    + L+ L  L L GC  LE +  ++  
Sbjct: 628 NIKQLWEGTKPLPNNLRHLNLSGSKNLIKMPYIGDALY-LESLDLEGCIQLEEIGLSVVL 686

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLE-IHLEG-TAIRGLPASIELLSGNILSNLKD 761
            + L++LNL       + P      D +L+ + LEG   +R +  SI LL      NLK+
Sbjct: 687 SRKLTSLNLRNCKSLIKLPRF--GEDLILKNLDLEGCKKLRHIDPSIGLLKKLEYLNLKN 744

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           CKNL SLP++I GL SL+ +  SGCSKL N
Sbjct: 745 CKNLVSLPNSILGLNSLQYLILSGCSKLYN 774



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 22/146 (15%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L +L L+G   +  +  SI LL  LE L LK CKNL SLP +I  L  L+ L LSGCSKL
Sbjct: 713 LKNLDLEGCKKLRHIDPSIGLLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILSGCSKL 772

Query: 66  KKFPQI--VASMEDLSKLYLDGTSI-----------------AEVPSSIELLPGLELLYL 106
                   +   E L K+ +DG  I                   +PSS  + P +  L L
Sbjct: 773 YNTELFYELRDAEQLKKIDIDGAPIHFQSTSSYSRQHQKSVSCLMPSS-PIFPCMSKLDL 831

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSG 132
           + C NLV +P +I  +  L+ L+LSG
Sbjct: 832 SFC-NLVEIPDAIGIMSCLERLDLSG 856


>gi|104646991|gb|ABF74119.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 206/450 (45%), Gaps = 79/450 (17%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL  T I E PSSI  L+ L  L +  C+ L +LP  +  L  L++L L GC +L+  P
Sbjct: 143 LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 70  QIVASMEDLSKLYLDG---------------------TSIAEVPSSIELLPGLELLYLNE 108
             + ++  L  L + G                     TSI E+P+ I  L  L  L ++E
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISE 262

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPDTLG 144
            K L  LP SI+ L+SL+ L LSGC  LE+                        +P+ +G
Sbjct: 263 NKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIG 322

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            + +LE L  S T IRR   SI  +  L+ L                  P  LL      
Sbjct: 323 NLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS---- 368

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              + P L+    L  L LS+    E  IP+ I NL +L EL L+ NNF  +PASI  L 
Sbjct: 369 ---LCPPLSRFDDLRALSLSNMXXTE--IPNSIGNLWNLLELDLSGNNFEFIPASIKRLT 423

Query: 265 NLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
            L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G    C ++Y +   + S   
Sbjct: 424 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISG----CFNQYFLRKLVAS-NC 478

Query: 324 LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV 383
            + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P    + 
Sbjct: 479 YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS-ESS 533

Query: 384 NKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           + ++GF+ C +  V     G Y  ++   H
Sbjct: 534 SDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I   P+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 638 RQSPQEPGNCSRLW---EEADEFPDIVQVLS--------DGTDIRELSLAIELLFGLVQL 686
           +  P+   N  RL+    + +EFP  +  LS        D   +R L   +  L  L  L
Sbjct: 131 KHFPEISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSL 190

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
            L+GC+ LE LP T+  L  L TL +SG     EFP +++S + L    +  T+I  +PA
Sbjct: 191 NLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVL---RISETSIEEIPA 247

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            I  LS     ++ + K L SLP +I+ LRSL  +  SGCS L++
Sbjct: 248 RICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLES 292



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EEFPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 27/143 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++   DL  L L     TE+P+SI  L  L  L L G  N   +P +I  L  L  L L+
Sbjct: 373 LSRFDDLRALSLSNMXXTEIPNSIGNLWNLLELDLSG-NNFEFIPASIKRLTRLNRLNLN 431

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C +L+  P                          EL  GL  +Y++ C +LV +    N
Sbjct: 432 NCQRLQALPD-------------------------ELPRGLLYIYIHSCTSLVSISGCFN 466

Query: 121 GLKSLKTLNLSGCCKLENVPDTL 143
               L+ L  S C KL+     L
Sbjct: 467 QY-FLRKLVASNCYKLDQAAQIL 488


>gi|224062613|ref|XP_002300861.1| predicted protein [Populus trichocarpa]
 gi|222842587|gb|EEE80134.1| predicted protein [Populus trichocarpa]
          Length = 647

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 198/463 (42%), Gaps = 86/463 (18%)

Query: 78  LSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           L KL L D  S+ +V  SI LL  L+ L L +C +L  LP SI  L SLK LN+SGC KL
Sbjct: 118 LEKLKLKDCISLVKVHDSIGLLSHLQFLNLQDCVDLKNLPGSICALSSLKKLNVSGCSKL 177

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
           E +P+ LG ++SL  L    TAI     +I  +KNL  L   GC                
Sbjct: 178 EELPEHLGSLQSLVLLLADETAISTLPETIGDLKNLEKLSLHGCRL-------------- 223

Query: 197 LLGKSSCPVALMLPSLTGV-CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
           +     CP     P+  G+  SL +LDL  C L +  IPSD+  L  L+ L L RNNF +
Sbjct: 224 IFSPRKCP-----PTRRGLPASLLELDLGHCNLTDDMIPSDLQGLPLLQNLKLCRNNFTS 278

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI- 314
           LPASI  L  L  L L +CK LQ +P++  +LQ + A  C SL T+   LK    + T+ 
Sbjct: 279 LPASIGSLPKLTRLWLNECKSLQCIPELQSSLQLLHAKDCLSLETI--NLKNFWGEGTLE 336

Query: 315 INCIDSLKLLRK----NGLAISMLREYL-----------------------------ELQ 341
           ++    LK +        L I ++ +YL                              LQ
Sbjct: 337 LDGCPKLKAIEGYFNLESLGIEIVEKYLGTCGLFTEDSLPSINVHVINNLTRAATISPLQ 396

Query: 342 AVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS 401
           A+S+     SI  P S IP WF +QNEG S+++  P   +   K  GF+I  V+     S
Sbjct: 397 ALSEKS-IYSIFLPMSDIPTWFSHQNEGDSVSLQVPPLDHGC-KFSGFSISAVYAWESSS 454

Query: 402 TGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF---------LPRHGH 452
              +            +   +      +F      V  D +WL           +     
Sbjct: 455 APCFFCPIIAVTNRTKNFHWNYSPKITFF---MREVEQDLMWLSCWSFENQVEGIDDEDM 511

Query: 453 NWQFESNL---------IRLSFRSISDPTWKVKRCGFHPIYMH 486
           +W+F   +         I + FR        VKRCG H +Y H
Sbjct: 512 SWRFRDEMEEGDRLDVWIDIGFRI------AVKRCGIHLLYHH 548



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 5/173 (2%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+ +V  SI LL+ L+ L L+ C +L +LP +I +L  L+ L +SGCSKL++ P+ +
Sbjct: 125 DCISLVKVHDSIGLLSHLQFLNLQDCVDLKNLPGSICALSSLKKLNVSGCSKLEELPEHL 184

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV---RLPSSINGL-KSLKTL 128
            S++ L  L  D T+I+ +P +I  L  LE L L+ C+ +    + P +  GL  SL  L
Sbjct: 185 GSLQSLVLLLADETAISTLPETIGDLKNLEKLSLHGCRLIFSPRKCPPTRRGLPASLLEL 244

Query: 129 NLSGCCKLEN-VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           +L  C   ++ +P  L  +  L+ L +         +SI  +  L  L+ + C
Sbjct: 245 DLGHCNLTDDMIPSDLQGLPLLQNLKLCRNNFTSLPASIGSLPKLTRLWLNEC 297



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 53/202 (26%)

Query: 657 FPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
           FP + ++ L D   + ++  +I LL  L  L L  C +L+ LP +I AL  L  LN+SG 
Sbjct: 115 FPSLEKLKLKDCISLVKVHDSIGLLSHLQFLNLQDCVDLKNLPGSICALSSLKKLNVSGC 174

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAI---------------------------------- 741
           SK  E PE   S   L+ +  + TAI                                  
Sbjct: 175 SKLEELPEHLGSLQSLVLLLADETAISTLPETIGDLKNLEKLSLHGCRLIFSPRKCPPTR 234

Query: 742 RGLPAS-IELLSGN----------------ILSNLKDCK-NLKSLPSTINGLRSLRMMYP 783
           RGLPAS +EL  G+                +L NLK C+ N  SLP++I  L  L  ++ 
Sbjct: 235 RGLPASLLELDLGHCNLTDDMIPSDLQGLPLLQNLKLCRNNFTSLPASIGSLPKLTRLWL 294

Query: 784 SGCSKLKNVTETLGKVESLEVR 805
           + C  L+ + E    ++ L  +
Sbjct: 295 NECKSLQCIPELQSSLQLLHAK 316



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%)

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           SI LLS     NL+DC +LK+LP +I  L SL+ +  SGCSKL+ + E LG ++SL + L
Sbjct: 135 SIGLLSHLQFLNLQDCVDLKNLPGSICALSSLKKLNVSGCSKLEELPEHLGSLQSLVLLL 194

Query: 807 S 807
           +
Sbjct: 195 A 195


>gi|408537066|gb|AFU75186.1| nematode resistance-like protein, partial [Solanum chacoense]
          Length = 307

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 128/288 (44%), Positives = 183/288 (63%), Gaps = 10/288 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+  SI  L  L LL L  C+NL +LP  I  L+ L  L L GCSKL+ FP+I   
Sbjct: 12  TSLVEINFSIXBLGKLVLLNLXNCRNLKTLPKRIR-LEKLEILILXGCSKLRTFPEIEEK 70

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++L L  T ++E+P+S+E L G+ ++ L+ CK+L  LPSSI  LK LKTL++SGC 
Sbjct: 71  MNCLAELXLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+N+PD L  +  LEEL  + TAI+   SS+ L+KNL+ L   GCN   +  S   H  
Sbjct: 131 KLKNLPDDLXLLVGLEELHCTHTAIQTIPSSMSLLKNLKXLSLXGCNALSSQVSSSSH-- 188

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
               G+ S  + +   +L+G+CSL  LDLSDC + +  I S++  L SL+ L LN NNF 
Sbjct: 189 ----GQKS--MGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEILILNGNNFS 242

Query: 255 TLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            +P ASIS L  L+ L+L  C RL+SLP++PP+++ + AN C+SL+++
Sbjct: 243 NIPXASISXLTRLKRLKLHSCGRLESLPELPPSIKGIYANECTSLMSI 290



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 78/127 (61%), Gaps = 1/127 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + T + E++ +I  L  LV L L  C+NL+ LP+ I  L+ L  L L G SK R FP
Sbjct: 7   VLEECTSLVEINFSIXBLGKLVLLNLXNCRNLKTLPKRIR-LEKLEILILXGCSKLRTFP 65

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L E+ L  T +  LPAS+E LSG  + NL  CK+L+SLPS+I  L+ L+ + 
Sbjct: 66  EIEEKMNCLAELXLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLD 125

Query: 783 PSGCSKL 789
            SGCSKL
Sbjct: 126 VSGCSKL 132



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 24/197 (12%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++L L  T ++E+P+S+E L+G+ ++ L  CK+L SLP +I  LKCL+TL++SGCS
Sbjct: 71  MNCLAELXLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCS 130

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP------- 116
           KLK  P  +  +  L +L+   T+I  +PSS+ LL  L+ L L  C  L           
Sbjct: 131 KLKNLPDDLXLLVGLEELHCTHTAIQTIPSSMSLLKNLKXLSLXGCNALSSQVSSSSHGQ 190

Query: 117 -------SSINGLKSLKTLNLSGCCKLENVPD-----TLGKVESLEELDVSGTAIRR-PT 163
                   +++GL SL  L+LS C    N+ D      LG + SLE L ++G      P 
Sbjct: 191 KSMGVNFQNLSGLCSLIMLDLSDC----NISDGGILSNLGFLPSLEILILNGNNFSNIPX 246

Query: 164 SSIFLMKNLRSLYFSGC 180
           +SI  +  L+ L    C
Sbjct: 247 ASISXLTRLKRLKLHSC 263



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 24/209 (11%)

Query: 647 CSRL--WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L  + E +E  + +  L  G T + EL  ++E L G+  + L+ CK+LE LP +I  
Sbjct: 58  CSKLRTFPEIEEKMNCLAELXLGATXLSELPASVENLSGVGVINLSYCKHLESLPSSIFR 117

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L TL++SG SK +  P+       L E+H   TAI+ +P+S+ LL      +L  C 
Sbjct: 118 LKCLKTLDVSGCSKLKNLPDDLXLLVGLEELHCTHTAIQTIPSSMSLLKNLKXLSLXGCN 177

Query: 764 NL-----------KSLP---STINGLRSLRMMYPSGCS-KLKNVTETLGKVESLEVRLSS 808
            L           KS+      ++GL SL M+  S C+     +   LG + SLE+ + +
Sbjct: 178 ALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLPSLEILILN 237

Query: 809 WNRPKMQNDFDCVEQSAVETVTKLAKAEL 837
                  N+F  +  +++  +T+L + +L
Sbjct: 238 G------NNFSNIPXASISXLTRLKRLKL 260


>gi|147799277|emb|CAN74723.1| hypothetical protein VITISV_014048 [Vitis vinifera]
          Length = 1448

 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 142/452 (31%), Positives = 207/452 (45%), Gaps = 70/452 (15%)

Query: 83   LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
             +G+ + EVP  IE    L+ L L  CKNL  LPSSI G KSL TL+ SGC +LE+ P+ 
Sbjct: 1025 FEGSDMNEVPI-IENPLELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEI 1083

Query: 143  LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC----NEPPASASWHLHLPFNLL 198
            L  +ESL +L + GT I+   SSI  ++ L +L    C    N P +  +         L
Sbjct: 1084 LQDMESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNL---TSLKNL 1140

Query: 199  GKSSCP-------------------------VALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
            G   CP                         +   LPSL+G+CSL  L L  C L E  I
Sbjct: 1141 GVRRCPNFNKFPDNLGRLRSLKSLFISHLDSMDFQLPSLSGLCSLKLLMLHACNLRE--I 1198

Query: 234  PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
            PS I  L SL  LYL RN+F  +P  IS L NL+ L+L  CK LQ +P++P +L ++  +
Sbjct: 1199 PSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIPELPSSLMYLDVH 1258

Query: 294  GCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
             C+SL  L     L  S  ++  C  S    R+ GL  + + E                 
Sbjct: 1259 NCTSLENLSSQSNLLWS--SLFKCFKSQIQGREFGLVRTFIAE----------------- 1299

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
                 IP+W  +Q  G  IT+  P   Y  +  +GF +C ++   +  T T    +Y   
Sbjct: 1300 ----SIPEWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLYIPLEIETTTRRRFNY--- 1352

Query: 414  ELECSMDGSGEGHYIYFRGKF---GHVVSDHLWLLFLPRHGHNWQFESN---LIRLSFRS 467
            +L+   D +   +  +   +F   G  +S    L++ P+     ++ SN    +  SF +
Sbjct: 1353 KLKFDDDSAYVSYQSFQSCEFCYDGDALSQGC-LIYYPKCRFPKRYYSNEWGTLNASFNA 1411

Query: 468  ISDPTWKVK--RCGFHPIYMHEVEEFDETTKQ 497
                T  VK  RCGFH +Y H+ E+ + T  Q
Sbjct: 1412 SESGTEPVKAARCGFHFLYAHDYEQNNLTIVQ 1443



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 197/447 (44%), Gaps = 69/447 (15%)

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            ++L +L L  ++I ++    +L   L ++ L+   +L+R+P   + + +L+ L L     
Sbjct: 601  KNLVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPD-FSSVPNLEILTLE---- 655

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
             E  P+  G +  L  LD+SGTAI    SSI  +  L++L    C++        LH   
Sbjct: 656  -ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSK--------LH--- 703

Query: 196  NLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                         +PS +  + SL  LDL  C + E  IPSDI +L SL++L L R +F 
Sbjct: 704  ------------KIPSHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFG 751

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
            ++P +I+ L  LE L L  C  L+ +P++P  L+ + A+G + + +    L L    +++
Sbjct: 752  SIPTTINQLSRLEILNLSHCSNLEQIPELPSRLRLLDAHGSNRISSRAPFLPL----HSL 807

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSIT 373
            +NC    ++L+    + S           S  G    IV PGS  IP+W M+      I+
Sbjct: 808  VNCFSWARVLKSTSFSDS-----------SYHGKGTCIVLPGSAGIPEWIMHWRNRCFIS 856

Query: 374  VTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYF--- 430
               P   +  N+ +GFAICCV+ VP       +     AH  E   D   E    +    
Sbjct: 857  TELPQNWHQNNEFLGFAICCVY-VPLADESEDIPKKESAHGPENESDNKSENESTHTWEN 915

Query: 431  -------------RGKFGHVVSDHLWLL-----FLPRHGHNWQFESNLIRLSFRSI-SDP 471
                         + +    VS   W++      +P   H+ Q+     R     I S+ 
Sbjct: 916  ETDDKSVAESSQDKDEDNESVSGQTWVVCYSKAAIPERFHSCQWTGITTRFDDVYINSEK 975

Query: 472  TWKVKRCGFHPIYMHEVEEFDETTKQS 498
               VK+CG   IY  ++++    T Q+
Sbjct: 976  DLTVKKCGVRLIYSQDLQQSHPLTTQT 1002



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 1/138 (0%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            +G+D+ E+ + IE    L  L L  CKNL  LP +I   K L+TL+ SG S+   FPEI 
Sbjct: 1026 EGSDMNEVPI-IENPLELDSLCLRNCKNLTSLPSSIFGFKSLATLSCSGCSQLESFPEIL 1084

Query: 726  SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
               + L +++L+GT I+ +P+SI  L G    +L  CKNL +LP +I  L SL+ +    
Sbjct: 1085 QDMESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVRR 1144

Query: 786  CSKLKNVTETLGKVESLE 803
            C       + LG++ SL+
Sbjct: 1145 CPNFNKFPDNLGRLRSLK 1162



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 23/164 (14%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  LYLDGT+I E+PSSI  L GL  L+L  CKNL +LP +I +L  L+ L + 
Sbjct: 1084 LQDMESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICNLTSLKNLGVR 1143

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP-SSIELLPGLELLYLNEC---------- 109
             C    KFP  +  +  L  L++      +    S+  L  L+LL L+ C          
Sbjct: 1144 RCPNFNKFPDNLGRLRSLKSLFISHLDSMDFQLPSLSGLCSLKLLMLHACNLREIPSGIY 1203

Query: 110  ------------KNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
                         +  R+P  I+ L +LK L+LS C  L+++P+
Sbjct: 1204 YLSSLVLLYLGRNHFSRIPDGISQLYNLKLLDLSHCKMLQHIPE 1247



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 7/177 (3%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K+L +L L  ++I ++    +L   L ++ L    +L  +P   SS+  L  L L     
Sbjct: 601 KNLVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIP-DFSSVPNLEILTLE---- 655

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            ++FP+I  +M +L  L L GT+I ++PSSI  L GL+ L L EC  L ++PS I  L S
Sbjct: 656 -ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSS 714

Query: 125 LKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           LK L+L  C  +E  +P  +  + SL++L++         ++I  +  L  L  S C
Sbjct: 715 LKVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHC 771



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P  I  L  L+ L+L  
Sbjct: 663 GNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSLKVLDLGH 722

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+      +P++I  L  LE+L L+ C NL ++P
Sbjct: 723 CNIMEGGIPSDICHLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSNLEQIP 778



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 659 DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF 718
           ++V++L   ++I++L    +L   L  + L+   +L R+P       + S  NL  L+  
Sbjct: 602 NLVELLLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIP------DFSSVPNLEILTLE 655

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
             FPEI  +  +L  + L GTAI  LP+SI  L+G     L++C  L  +PS I  L SL
Sbjct: 656 ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSL 715

Query: 779 RMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
           +++    C    N+ E  G + S    LSS  +  ++        S   T+ +L++ E+L
Sbjct: 716 KVLDLGHC----NIME--GGIPSDICHLSSLQKLNLERGH---FGSIPTTINQLSRLEIL 766



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 26/165 (15%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I+Q +        DGT I+E+  +I  L GL  L+L  CKNL  LP 
Sbjct: 1074 CSQL----ESFPEILQDMESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPE 1129

Query: 700  TISALKYLSTLNLSGLSKFREFPE---ITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
            +I  L  L  L +     F +FP+      S   L   HL+    + LP+   L S  +L
Sbjct: 1130 SICNLTSLKNLGVRRCPNFNKFPDNLGRLRSLKSLFISHLDSMDFQ-LPSLSGLCSLKLL 1188

Query: 757  SNLKDCKNLKSLPSTINGL---------RSLRMMYPSGCSKLKNV 792
              L  C NL+ +PS I  L         R+     P G S+L N+
Sbjct: 1189 M-LHAC-NLREIPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNL 1231



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 30/161 (18%)

Query: 655 DEFPDI------VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FP+I      ++VL   GT I +L  +I  L GL  L L  C  L ++P  I  L  L
Sbjct: 656 ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSL 715

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             L+L   +                   +EG    G+P+ I  LS     NL+   +  S
Sbjct: 716 KVLDLGHCNI------------------MEG----GIPSDICHLSSLQKLNLER-GHFGS 752

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
           +P+TIN L  L ++  S CS L+ + E   ++  L+   S+
Sbjct: 753 IPTTINQLSRLEILNLSHCSNLEQIPELPSRLRLLDAHGSN 793


>gi|104647003|gb|ABF74125.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 205/450 (45%), Gaps = 79/450 (17%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL  T I E PSSI  L+ L  L +  C+ L +LP  +  L  L++L L GC +L+  P
Sbjct: 143 LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 70  QIVASMEDLSKLYLDG---------------------TSIAEVPSSIELLPGLELLYLNE 108
             + ++  L  L + G                     TSI E+P+ I  L  L  L ++E
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISE 262

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPDTLG 144
            K L  LP SI+ L+SL+ L LSGC  LE+                        +P+ +G
Sbjct: 263 NKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIG 322

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            + +LE L  S T IRR   SI  +  L+ L                  P  LL      
Sbjct: 323 NLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS---- 368

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              + P L+    L  L LS+  +     P+ I NL +L EL L+ NNF  +PASI  L 
Sbjct: 369 ---LCPPLSRFDDLRALSLSN--MXXXXXPNSIGNLWNLLELDLSGNNFEFIPASIKRLT 423

Query: 265 NLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
            L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G    C ++Y +   + S   
Sbjct: 424 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISG----CFNQYFLRKLVAS-NC 478

Query: 324 LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV 383
            + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P    + 
Sbjct: 479 YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS-ESS 533

Query: 384 NKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           + ++GF+ C +  V     G Y  ++   H
Sbjct: 534 SDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I   P+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 638 RQSPQEPGNCSRLW---EEADEFPDIVQVLS--------DGTDIRELSLAIELLFGLVQL 686
           +  P+   N  RL+    + +EFP  +  LS        D   +R L   +  L  L  L
Sbjct: 131 KHFPEISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSL 190

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
            L+GC+ LE LP T+  L  L TL +SG     EFP +++S + L    +  T+I  +PA
Sbjct: 191 NLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVL---RISETSIEEIPA 247

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            I  LS     ++ + K L SLP +I+ LRSL  +  SGCS L++
Sbjct: 248 RICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EEFPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326


>gi|224145016|ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1254

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 226/487 (46%), Gaps = 96/487 (19%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            TS+ + PSS++ L  L  L L+GCK L +LP   +S   L TL LSGCS +KK P+   +
Sbjct: 659  TSLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRFNS-SFLETLNLSGCSNIKKCPE---T 714

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
               L+ L L+ T++ E+P SI  L GL  L L  CK LV LP ++  LKSL   ++SGC 
Sbjct: 715  ARKLTYLNLNETAVEELPQSIGELGGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCS 774

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIF---------------------LMKNLR 173
             +   PD      ++  L ++GTAI    SSI                      + +N+R
Sbjct: 775  SISRFPDF---SRNIRYLYLNGTAIEELPSSIGDLRELIYLDLSGCSSITEFPKVSRNIR 831

Query: 174  SLYFSGC--NEPPASASWHLHLPF-----------------------------NLLGKS- 201
             LY  G    E P+S   ++ + F                             NL G + 
Sbjct: 832  ELYLDGTAIREIPSSIQLNVCVNFMNCTCETANNLRFFQAASTGITKLPSPVGNLKGLAC 891

Query: 202  ------------SCPVALMLPSL-TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                         C V L LP     +  L KL+L  C +  + +P  +  L SL+ L L
Sbjct: 892  LEVGNCKYLKGIECLVDLHLPERDMDLKYLRKLNLDGCCI--SKVPDSLGCLSSLEVLDL 949

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
            + NNF T+P +I  L+ L+ L L  C++L+S+P++P  L  + A+ C SL+ +  +  + 
Sbjct: 950  SGNNFETMPMNIYKLVELQYLGLRSCRKLKSIPRLPRRLSKLDAHDCQSLIKVSSSYVVE 1009

Query: 309  RSKYTII--NCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL-----SIVFPGSQIPK 361
             + +  I  NC      LR   +   +L   L+ Q  ++  H++     S   PG   P+
Sbjct: 1010 GNIFEFIFTNC------LRLPVINQILLYSLLKFQLYTERLHQVPAGTSSFCLPGDVTPE 1063

Query: 362  WFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV--FQVPKHSTG---TYLFHSY--PAHE 414
            WF +Q+ GS++T    S+  N ++ +GF++  V  F+   HS     TY F +    +H+
Sbjct: 1064 WFSHQSWGSTVTFHLSSHWAN-SEFLGFSLGAVIAFRSFGHSLQVKCTYHFRNKHGDSHD 1122

Query: 415  LECSMDG 421
            L C + G
Sbjct: 1123 LYCYLHG 1129



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + +   +++ L  LV L L GCK L  LP   ++  +L TLNLSG S  ++ PE    
Sbjct: 659 TSLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRFNS-SFLETLNLSGCSNIKKCPETAR- 716

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             +L  ++L  TA+  LP SI  L G +  NLK+CK L +LP  +  L+SL +   SGCS
Sbjct: 717 --KLTYLNLNETAVEELPQSIGELGGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCS 774

Query: 788 KL 789
            +
Sbjct: 775 SI 776



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 50/301 (16%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  L+ DG  +T +P +      +EL       N+  L     +L  L+ + LS C  
Sbjct: 580 EELRYLHWDGYPLTSLPCNFRPQNLVELNL--SSSNVKQLWRGDQNLVNLKDVNLSNCEH 637

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +   P       DLSK                    LE L L  C +LV+ PSS+  L  
Sbjct: 638 ITLLP-------DLSKAR-----------------NLERLNLQFCTSLVKFPSSVQHLDK 673

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRR-PTSSIFLMKNLRSLYFSGCNE 182
           L  L+L GC +L N+P        LE L++SG + I++ P ++       R L +   NE
Sbjct: 674 LVDLDLRGCKRLINLPSRFNS-SFLETLNLSGCSNIKKCPETA-------RKLTYLNLNE 725

Query: 183 ------PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPS 235
                 P +       +  NL    +C + + LP ++  + SL   D+S C    ++I  
Sbjct: 726 TAVEELPQSIGELGGLVALNL---KNCKLLVNLPENMYLLKSLLIADISGC----SSISR 778

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
             D   +++ LYLN      LP+SI  L  L  L+L  C  +   P++  N++ +  +G 
Sbjct: 779 FPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLSGCSSITEFPKVSRNIRELYLDGT 838

Query: 296 S 296
           +
Sbjct: 839 A 839



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL  +I  L GLV L L  CK L  LP  +  LK L   ++SG S    FP+ + +
Sbjct: 726 TAVEELPQSIGELGGLVALNLKNCKLLVNLPENMYLLKSLLIADISGCSSISRFPDFSRN 785

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
              +  ++L GTAI  LP+SI  L   I  +L  C ++   P     +R L +
Sbjct: 786 ---IRYLYLNGTAIEELPSSIGDLRELIYLDLSGCSSITEFPKVSRNIRELYL 835



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 49/163 (30%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L LNG   +E LP +I  L+ L  L+LSG S   EFP+++ +   + E++L+GTAIR +P
Sbjct: 789 LYLNGTA-IEELPSSIGDLRELIYLDLSGCSSITEFPKVSRN---IRELYLDGTAIREIP 844

Query: 746 ASIEL------------LSGNI----------------LSNLK--------DCKNLKS-- 767
           +SI+L             + N+                + NLK        +CK LK   
Sbjct: 845 SSIQLNVCVNFMNCTCETANNLRFFQAASTGITKLPSPVGNLKGLACLEVGNCKYLKGIE 904

Query: 768 ------LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
                 LP     L+ LR +   GC  +  V ++LG + SLEV
Sbjct: 905 CLVDLHLPERDMDLKYLRKLNLDGCC-ISKVPDSLGCLSSLEV 946



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            +K L  L LDG  I++VP S+  L+ LE+L L G  N  ++P+ I  L  L+ L L  C 
Sbjct: 918  LKYLRKLNLDGCCISKVPDSLGCLSSLEVLDLSG-NNFETMPMNIYKLVELQYLGLRSCR 976

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSS 94
            KLK  P++   +  L     D  S+ +V SS
Sbjct: 977  KLKSIPRLPRRLSKLDA--HDCQSLIKVSSS 1005


>gi|224131066|ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1176

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 235/525 (44%), Gaps = 76/525 (14%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  +K L DLYL   S +  +P+S   L  L  L L  C  L SLP  I  LK L  L+L
Sbjct: 689  IGELKSLEDLYLYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDNIGELKSLVELKL 748

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              CSKL+  P  +  ++ L++L L   S +  +P+SI  L  L  L L+    L  LP  
Sbjct: 749  FSCSKLESLPNSIGGLKCLAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKLASLPDC 808

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
               LKSL  L++S C KL ++P+++G+++ L EL++SG + +    +SI+ +++L+ +  
Sbjct: 809  FGELKSLVLLHISFCPKLVSLPNSIGQLKCLAELNLSGCSELANLPNSIYYLESLKWINL 868

Query: 178  SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS----------LTKLDLSDCG 227
              C                +L KS        P L   CS          L  L+L   G
Sbjct: 869  ERCY---------------MLNKS--------PVLNPRCSEVEEIAFGGCLQYLNLGASG 905

Query: 228  LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            + E  IP  I +L SL++L L+ N+F  +PA+I  L  L +L+L  C+RLQ LP++P +L
Sbjct: 906  VSE--IPGSIGSLVSLRDLRLSCNDFERIPANIKQLPMLIKLDLHGCERLQHLPELPSSL 963

Query: 288  QFVRANGCSSLVTLFGALKLCRSKYTI----INCIDSLKL-------------LRKNGLA 330
            Q + A+ C SL +L         +Y       N  + LKL             LR   +A
Sbjct: 964  QVLMASYCISLRSLASIFIQGGKEYAAASQQFNFSNCLKLDQNACNRIMEDVHLRIRRMA 1023

Query: 331  ISML-REYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLY---NVNKV 386
             S+  REY           ++ +  PG ++P+WF Y+N G S ++  P++ +   N ++ 
Sbjct: 1024 SSLFNREYF------GKPIRVRLCIPGLEVPEWFCYKNTGGS-SLNIPAHWHRTTNTDQF 1076

Query: 387  VGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF 446
            +GF  C V           +      H +    + S    Y Y        V      L+
Sbjct: 1077 LGFTFCAVVSFGNSKKKRPVNIRCECHLITQGGNQSDLNFYCY------EEVERKERCLW 1130

Query: 447  LPRHGHNWQFESNLI----RLSFRSISDPTWKVKRCGFHPIYMHE 487
               H   W   SN         F+ +      V +CG HP+++ +
Sbjct: 1131 EGDHVFIWSINSNCFFKEASFHFKQLWGTADVVVKCGVHPLFVQD 1175



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 1/125 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  LV+L L  C  LE LP +I  LK L+ L LS  SK    P        L++++L   
Sbjct: 740 LKSLVELKLFSCSKLESLPNSIGGLKCLAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYF 799

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + +  LP     L   +L ++  C  L SLP++I  L+ L  +  SGCS+L N+  ++  
Sbjct: 800 SKLASLPDCFGELKSLVLLHISFCPKLVSLPNSIGQLKCLAELNLSGCSELANLPNSIYY 859

Query: 799 VESLE 803
           +ESL+
Sbjct: 860 LESLK 864



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 2/146 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  LV+L L  C++L  LP +I  LK L  L L   SK    P        L++++
Sbjct: 664 SIGCLSQLVKLKLIFCRSLASLPDSIGELKSLEDLYLYFCSKLASLPNSFRELKCLVKLN 723

Query: 736 L-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L   + +  LP +I  L   +   L  C  L+SLP++I GL+ L  +  S  SKL ++  
Sbjct: 724 LIRCSELVSLPDNIGELKSLVELKLFSCSKLESLPNSIGGLKCLAELCLSNFSKLTSLPN 783

Query: 795 TLGKVESLEVRLSSWNRPKMQNDFDC 820
           ++GK++ L V+L+     K+ +  DC
Sbjct: 784 SIGKLKCL-VKLNLSYFSKLASLPDC 808



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           L +L L+    L  LP +I  LK L  LNLS  SK    P+       L+ +H+     +
Sbjct: 767 LAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKLASLPDCFGELKSLVLLHISFCPKL 826

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             LP SI  L      NL  C  L +LP++I  L SL+ +    C  L
Sbjct: 827 VSLPNSIGQLKCLAELNLSGCSELANLPNSIYYLESLKWINLERCYML 874



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 81/189 (42%), Gaps = 33/189 (17%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG---- 738
            L +L L+GC  L  LP +I  L+ L  +NL       + P +     ++ EI   G    
Sbjct: 839  LAELNLSGCSELANLPNSIYYLESLKWINLERCYMLNKSPVLNPRCSEVEEIAFGGCLQY 898

Query: 739  -----TAIRGLPASIELLSGNILSNLKD----CKNLKSLPSTINGLRSLRMMYPSGCSKL 789
                 + +  +P SI    G+++S L+D    C + + +P+ I  L  L  +   GC +L
Sbjct: 899  LNLGASGVSEIPGSI----GSLVS-LRDLRLSCNDFERIPANIKQLPMLIKLDLHGCERL 953

Query: 790  KNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVD 849
            +++ E      SL+V ++S+          C+   ++ ++      E    S  +  N  
Sbjct: 954  QHLPEL---PSSLQVLMASY----------CISLRSLASIFIQGGKEYAAASQQF--NFS 998

Query: 850  KCMKLSTTA 858
             C+KL   A
Sbjct: 999  NCLKLDQNA 1007


>gi|359486100|ref|XP_002274578.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1535

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 243/597 (40%), Gaps = 139/597 (23%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--------------------- 40
             +MK L  L L  T+I ++P SI  L  L  L L GC                       
Sbjct: 867  GNMKSLRHLCLRNTAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRY 926

Query: 41   --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
              +  LP +I  L+ LR L+LSGCSK +KFP+   +M+ L +L L  T+I ++P SI  L
Sbjct: 927  TAIKDLPDSIGDLESLRLLDLSGCSKFEKFPEKGGNMKSLVELDLKNTAIKDLPDSIGDL 986

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG-----------------------CCK 135
              LE L L++C    + P     +KSLK L L+                        C K
Sbjct: 987  ESLESLDLSDCSKFEKFPEKGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLSDCSK 1046

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHL 191
             E  P+  G ++SL +LD+  TAI+    SI  +++LR L  S C++    P    +   
Sbjct: 1047 FEKFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGNMK- 1105

Query: 192  HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                  L   +  +  +  S+  + SL  LDLSDC   E   P    N+ SL +L L   
Sbjct: 1106 --SLKKLFLRNTAIKDLPDSIGDLESLESLDLSDCSKFEK-FPEKGGNMKSLMDLDLTNT 1162

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQ--------------------IP------P 285
                LP SI  L +L+ L L DC + +  P+                    +P       
Sbjct: 1163 AIKDLPDSIGDLESLKFLVLSDCSKFEKFPEKGGNMKSLIHLDLKNTAIKDLPTNISRLK 1222

Query: 286  NLQFVRANGCSSLVTLFGALKLCR-SKYTIINC---------------IDSLKLLRKNGL 329
            NL+ +   GCS L     + +LC   K  I  C               ID+     K  L
Sbjct: 1223 NLERLMLGGCSDLWEGLISNQLCNLQKLNISQCKMAGQILVLPSSLQEIDAYPCTSKEDL 1282

Query: 330  AISMLREYLE-LQAVSDPGH--KLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK 385
            +  +   +L  L++ ++     KL  V P S  IP+W  YQN GS +T   P+  Y    
Sbjct: 1283 SGLLWLCHLNWLKSTTEELKCWKLGAVIPESNGIPEWIRYQNMGSEVTTELPTNWYEDPD 1342

Query: 386  VVGFAICCVFQ-VPKHSTGT-YLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDH-- 441
             +GF + CV++ +P       YLF       LEC ++  G G    F+ +  H  S    
Sbjct: 1343 FLGFVVSCVYRHIPTSDFDEPYLF-------LECELNLHGNG--FEFKDECCHGYSCDFK 1393

Query: 442  ---LWLLFLPR------HGH-----NWQFESNLIRLSFRSISDPTWKVKRCGFHPIY 484
               +W+   P+      H H     N  FES LI             +K+CG + I+
Sbjct: 1394 DLMVWVWCYPKIAIPKEHHHKYTHINASFESYLI------------NIKKCGINLIF 1438



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 178/378 (47%), Gaps = 38/378 (10%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             +SM +L  L L+G  S+ ++  S+  +  L  L+L+ C  L +LP +I  L+ L +L+L
Sbjct: 747  FSSMPNLERLILEGCVSLIDIHPSVGNMKKLTTLSLRFCDQLKNLPDSIGYLESLESLDL 806

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR----- 114
            S CSK  KFP+   +M+ L KL L  T+I ++P SI  L  LE L L+ C    +     
Sbjct: 807  SDCSKFVKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKG 866

Query: 115  ------------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
                              LP SI  L+SL  LNLSGC K E  P+  G ++SL ELD+  
Sbjct: 867  GNMKSLRHLCLRNTAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRY 926

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSL 212
            TAI+    SI  +++LR L  SGC++    P    +    +  +L    +  +  +  S+
Sbjct: 927  TAIKDLPDSIGDLESLRLLDLSGCSKFEKFPEKGGNMKSLVELDL---KNTAIKDLPDSI 983

Query: 213  TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
              + SL  LDLSDC   E   P    N+ SLK LYL       LP SI  L +L  L L 
Sbjct: 984  GDLESLESLDLSDCSKFE-KFPEKGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLS 1042

Query: 273  DCKRLQSLPQIPPNLQF-----VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN 327
            DC + +  P+   N++      +R      L    G L+  R    + +C    K   K 
Sbjct: 1043 DCSKFEKFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLESLRL-LDLSDCSKFEKFPEKG 1101

Query: 328  GLAISMLREYLELQAVSD 345
            G   S+ + +L   A+ D
Sbjct: 1102 GNMKSLKKLFLRNTAIKD 1119



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 160/337 (47%), Gaps = 54/337 (16%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--------------------- 40
             +MK L  L L  T+I ++P SI  L  LE L L  C                       
Sbjct: 820  GNMKSLMKLDLRFTAIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRN 879

Query: 41   --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
              +  LP +I  L+ L  L LSGCSK +KFP+   +M+ L +L L  T+I ++P SI  L
Sbjct: 880  TAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSIGDL 939

Query: 99   PGLELLYLNEC-------------KNLVRL----------PSSINGLKSLKTLNLSGCCK 135
              L LL L+ C             K+LV L          P SI  L+SL++L+LS C K
Sbjct: 940  ESLRLLDLSGCSKFEKFPEKGGNMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSK 999

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHL 191
             E  P+  G ++SL+ L ++ TAI+    SI  +++L SL+ S C++    P    +   
Sbjct: 1000 FEKFPEKGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLSDCSKFEKFPEKGGNMKS 1059

Query: 192  HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
             +  +L       +  +  S+  + SL  LDLSDC   E   P    N+ SLK+L+L   
Sbjct: 1060 LMKLDL---RYTAIKDLPDSIGDLESLRLLDLSDCSKFEK-FPEKGGNMKSLKKLFLRNT 1115

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
                LP SI  L +LE L+L DC + +  P+   N++
Sbjct: 1116 AIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMK 1152



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 110/257 (42%), Gaps = 36/257 (14%)

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CS +K+  Q    +E L  + L  +      S    +P LE L L  C +L+ +  S+  
Sbjct: 714 CSNIKQLWQGHKDLERLKVIDLSCSRNLIQMSEFSSMPNLERLILEGCVSLIDIHPSVGN 773

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG------------------------T 157
           +K L TL+L  C +L+N+PD++G +ESLE LD+S                         T
Sbjct: 774 MKKLTTLSLRFCDQLKNLPDSIGYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLDLRFT 833

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCN------EPPASASWHLHLPFNLLGKSSCPVALMLPS 211
           AI+    SI  +++L SL  S C+      E   +     HL          P      S
Sbjct: 834 AIKDLPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTAIKDLP-----DS 888

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           +  + SL  L+LS C   E   P    N+ SL EL L       LP SI  L +L  L+L
Sbjct: 889 IGDLESLMFLNLSGCSKFE-KFPEKGGNMKSLMELDLRYTAIKDLPDSIGDLESLRLLDL 947

Query: 272 EDCKRLQSLPQIPPNLQ 288
             C + +  P+   N++
Sbjct: 948 SGCSKFEKFPEKGGNMK 964



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 27/184 (14%)

Query: 646 NCSRLWEEADEF---PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           +CSR   +  EF   P++ +++ +G   + ++  ++  +  L  L+L  C  L+ LP +I
Sbjct: 736 SCSRNLIQMSEFSSMPNLERLILEGCVSLIDIHPSVGNMKKLTTLSLRFCDQLKNLPDSI 795

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI---ELLSGNILS- 757
             L+ L +L+LS  SKF +FPE   +   L+++ L  TAI+ LP SI   E L    LS 
Sbjct: 796 GYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDLESLESLNLSF 855

Query: 758 ------------NLKDCKNL-------KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
                       N+K  ++L       K LP +I  L SL  +  SGCSK +   E  G 
Sbjct: 856 CSKFEKFPEKGGNMKSLRHLCLRNTAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGN 915

Query: 799 VESL 802
           ++SL
Sbjct: 916 MKSL 919



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 24/153 (15%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLER-----------------------LPRTISAL 704
            T I++L  +I  L  L+ L L+GC   E+                       LP +I  L
Sbjct: 880  TAIKDLPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSIGDL 939

Query: 705  KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
            + L  L+LSG SKF +FPE   +   L+E+ L+ TAI+ LP SI  L      +L DC  
Sbjct: 940  ESLRLLDLSGCSKFEKFPEKGGNMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSK 999

Query: 765  LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             +  P     ++SL+ +Y +  + +K++ +++G
Sbjct: 1000 FEKFPEKGGNMKSLKWLYLTNTA-IKDLPDSIG 1031



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 24/175 (13%)

Query: 652  EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
            E+      +V++    T I++L  +I  L  L  L L+ C   E+ P     +K L  L 
Sbjct: 958  EKGGNMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKWLY 1017

Query: 712  LSGL-----------------------SKFREFPEITSSRDQLLEIHLEGTAIRGLPASI 748
            L+                         SKF +FPE   +   L+++ L  TAI+ LP SI
Sbjct: 1018 LTNTAIKDLPDSIGDLESLLSLHLSDCSKFEKFPEKGGNMKSLMKLDLRYTAIKDLPDSI 1077

Query: 749  ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              L    L +L DC   +  P     ++SL+ ++    + +K++ +++G +ESLE
Sbjct: 1078 GDLESLRLLDLSDCSKFEKFPEKGGNMKSLKKLFLRNTA-IKDLPDSIGDLESLE 1131



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 23/132 (17%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L  L+LS  SKF +FPE   +   L ++ L  TAI+ LP SI  L  
Sbjct: 1070 IKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGNMKSLKKLFLRNTAIKDLPDSIGDLES 1129

Query: 754  NILSNLKDCKN-----------------------LKSLPSTINGLRSLRMMYPSGCSKLK 790
                +L DC                         +K LP +I  L SL+ +  S CSK +
Sbjct: 1130 LESLDLSDCSKFEKFPEKGGNMKSLMDLDLTNTAIKDLPDSIGDLESLKFLVLSDCSKFE 1189

Query: 791  NVTETLGKVESL 802
               E  G ++SL
Sbjct: 1190 KFPEKGGNMKSL 1201



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L +L+LS  SKF +FPE   +   L+++ L  TAI+ LP SI  L  
Sbjct: 1117 IKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLMDLDLTNTAIKDLPDSIGDLES 1176

Query: 754  NILSNLKDCKNLKSLPSTINGLRSLRMM---------YPSGCSKLKNV 792
                 L DC   +  P     ++SL  +          P+  S+LKN+
Sbjct: 1177 LKFLVLSDCSKFEKFPEKGGNMKSLIHLDLKNTAIKDLPTNISRLKNL 1224


>gi|104646985|gb|ABF74116.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 203/451 (45%), Gaps = 81/451 (17%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL  T I E+PSSI  L+ L  L +  C+ L +LP  +  L  L++L L GC +L+  P
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 70  QIVASMEDLSKLYLDG---------------------TSIAEVPSSIELLPGLELLYLNE 108
             + ++  L  L + G                     TSI E+P+ I  L  L  L ++E
Sbjct: 203 DTLQNLTSLETLEVSGCLXVXXXPXXSTSIXVLRXXXTSIEEIPARICNLSQLRSLDISE 262

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPDTLG 144
            K L  LP SI+ L+SL+ L LSGC  LE+                        +P+ +G
Sbjct: 263 NKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIG 322

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            + +LE L  S T IRR   SI  +  L+ L                  P  LL      
Sbjct: 323 NLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS---- 368

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              + P L+    L  L LS+  +      + I NL +L EL L+ NNF  +PASI  L 
Sbjct: 369 ---LCPPLSRFDDLRALSLSN--MXXXXXXNSIGNLWNLLELDLSGNNFEFIPASIKRLT 423

Query: 265 NLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCIDSLK 322
            L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC     
Sbjct: 424 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY---- 479

Query: 323 LLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYN 382
             + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P    +
Sbjct: 480 --KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS-ES 532

Query: 383 VNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
            + ++GF+ C +  V     G Y  ++   H
Sbjct: 533 SSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 139/259 (53%), Gaps = 13/259 (5%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSG--TAIRRP--TSSIFLMKNLRSLYFSGCNEPPASASWHL 191
           LEN+PDTL  + SLE L+VSG       P  ++SI +++       +   E PA    +L
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCLXVXXXPXXSTSIXVLRX----XXTSIEEIPARIC-NL 252

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
               +L    +  +A +  S++ + SL KL LS C + E+        +  L+   L+R 
Sbjct: 253 SQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRT 312

Query: 252 NFVTLPASISGLLNLEELE 270
           +   LP +I  L+ LE L+
Sbjct: 313 SIKELPENIGNLVALEVLQ 331



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG       P 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLXVXXXPX 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
            ++S   +  +    T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 XSTS---IXVLRXXXTSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 127/322 (39%), Gaps = 74/322 (22%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG---------------------TAIRR 161
           K L    L+ C +L+++P  +  ++SLE + +SG                     T I  
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISWNTRRLYLSSTKIEE 152

Query: 162 PTSSIFLMKNLRSLYFSGCNEPPASASWHLHL-PFNLLGKSSCPVALMLP-SLTGVCSLT 219
             SSI  +  L  L  S C       S+  HL     L    C     LP +L  + SL 
Sbjct: 153 LPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLE 212

Query: 220 KLDLSDC-------------------GLGEAAIPSDIDNLHSLKELYLNRNN-FVTLPAS 259
            L++S C                         IP+ I NL  L+ L ++ N    +LP S
Sbjct: 213 TLEVSGCLXVXXXPXXSTSIXVLRXXXTSIEEIPARICNLSQLRSLDISENKRLASLPVS 272

Query: 260 ISGLLNLEELELEDCKRLQSLP 281
           IS L +LE+L+L  C  L+S P
Sbjct: 273 ISELRSLEKLKLSGCSVLESFP 294


>gi|104646965|gb|ABF74106.1| disease resistance protein [Arabidopsis thaliana]
          Length = 579

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 209/454 (46%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           L+L  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  ++E    L +  TSI  +P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTNIE---VLRISETSIEAIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S TAIRR   SI  +  L+ +                    N    S
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVVAIG-----------------NSFYTS 362

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
              +  + P L+    L  L LS+  +      + I NL +L EL L+ NNF  +PASI 
Sbjct: 363 EGLLHSLCPPLSRFDDLRALSLSN--MNXXXXXNSIGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
             KL +   +   ++   ++L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 --KLDQATQI---LIHRNMKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  +S   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNSLKIH 559



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L ++P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +L+L  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                                    L  
Sbjct: 198 LENLPDTLQNLTSLETLEVSGC-----------------------------------LNV 222

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
           N   + S  + ++  S T +                AIP+ I NL  L+ L ++ N    
Sbjct: 223 NEFPRVSTNIEVLRISETSI---------------EAIPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L    L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNTRRLF---L 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           ++++ + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTNIEVL---RISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+N+P  +  ++SLE + +SG +  +    I    N R L+ S    
Sbjct: 94  KGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEI--SYNTRRLFLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  N++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLR 236



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I  +   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTNIEVLRISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREF-PEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    F PEI  +   L    L+ T I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPENI----GNLVA 326


>gi|255547494|ref|XP_002514804.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223545855|gb|EEF47358.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1082

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 198/457 (43%), Gaps = 121/457 (26%)

Query: 111  NLVRLPSSINGLKSLKTLNLS---GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
            N+ +L   +  LK LK ++LS      K  +  D L  ++ LE+LD+ G A ++  S+  
Sbjct: 608  NIQQLWKGMKPLKMLKVIDLSYSVNLIKTMDFRDGLWDMKCLEKLDIGGIAGKQLAST-- 665

Query: 168  LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
                                +W   LP  LL + +  +   LPS++ +C+L  L+LS C 
Sbjct: 666  -------------------KAWDFLLPSWLLPRKTLNLMDFLPSISVLCTLRSLNLSYCN 706

Query: 228  LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            L E  +P+D+    SL+ L L+ N+FV++P SIS L  LE+L    CK+LQSLP +P  +
Sbjct: 707  LAEGTLPNDLSCFPSLQSLNLSGNDFVSVPTSISKLSKLEDLRFAHCKKLQSLPNLPSGI 766

Query: 288  QFVRANGCSSLVTLFGAL--KLCR------------------------------------ 309
             ++  +GCSSL T    +  K C+                                    
Sbjct: 767  LYLSTDGCSSLGTSLPKIITKHCQLENLCFANCERLQSLPDLSSSIVNISMEGLTAQENF 826

Query: 310  -----------SKYTIINCIDSLKLLRKNGLAISMLREYLEL------QAVSDPGHKLSI 352
                       S  T +N +  +++  KN  A + L  YL        Q + +P   +S+
Sbjct: 827  SNPLEKDDPKASALTFLNRMQLVEIQGKNCSAFARLTSYLHYLLRHSSQGLFNPSSHVSM 886

Query: 353  VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV----PKHSTGT---- 404
               GS+IP+WF YQ  GSSI +  P + +  ++ +GFAIC  F+V    P   T T    
Sbjct: 887  CLGGSEIPEWFNYQGIGSSIELQLPQHWF-TDRWMGFAICVDFEVHDELPLSETCTLFCD 945

Query: 405  ---------YLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHN-- 453
                      LF   P+ ++  +M+                + S+ LW  F+PR   N  
Sbjct: 946  LHAWVMPDQLLFLGRPSMQISGTMN----------------IKSEQLWFNFMPRSSLNCV 989

Query: 454  --WQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEV 488
              W+   NL + SF S      KVK CGF  IY H++
Sbjct: 990  DWWESCGNL-KASFFS---NGLKVKSCGFRIIYDHDI 1022



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 5/115 (4%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           NL     +IS L  LR+L LS C+  +   P  ++    L  L L G     VP+SI  L
Sbjct: 683 NLMDFLPSISVLCTLRSLNLSYCNLAEGTLPNDLSCFPSLQSLNLSGNDFVSVPTSISKL 742

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL-ENVPDTLGKVESLEEL 152
             LE L    CK L  LP+  +G+  L T    GC  L  ++P  + K   LE L
Sbjct: 743 SKLEDLRFAHCKKLQSLPNLPSGILYLST---DGCSSLGTSLPKIITKHCQLENL 794


>gi|298205194|emb|CBI17253.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/308 (35%), Positives = 163/308 (52%), Gaps = 48/308 (15%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M+ L+ L+ D ++I E+PS+IE L                          L  L+L  CS
Sbjct: 1   MEALTYLHFDRSAIKELPSAIEYL--------------------------LEDLQLFVCS 34

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L  FP+I   MED+ +     T I E+PSS+E L  +  L+L++CKNL  L SSI   K
Sbjct: 35  NLDAFPEI---MEDMKEFLDLRTGIKELPSSMEHL-NINSLFLSDCKNLRSLLSSIRRFK 90

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           S   L L+GC  L N P+ +  ++ LE L + GTAI+   SSI  +K+L+ LY S C   
Sbjct: 91  SFCRLFLNGCSSLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKN- 149

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLP----------SLTGVCSLTKLDLSDCGLGEAAI 233
                  + +P + +    C   L+LP          +L G+C+L +LDLS C L E +I
Sbjct: 150 ------LVTIP-DSINDLRCLKRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSI 202

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
           P+DI  L+SL  L L+ N+ V++P+ I+ L  L  L++  CK LQ +P++  +L  + A+
Sbjct: 203 PTDIWGLYSLCTLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAH 262

Query: 294 GCSSLVTL 301
           GC+ L  L
Sbjct: 263 GCTKLEML 270



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 88/161 (54%), Gaps = 6/161 (3%)

Query: 655 DEFPDIVQVLSDGTDIR----ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           D FP+I++ + +  D+R    EL  ++E L  +  L L+ CKNL  L  +I   K    L
Sbjct: 37  DAFPEIMEDMKEFLDLRTGIKELPSSMEHL-NINSLFLSDCKNLRSLLSSIRRFKSFCRL 95

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
            L+G S  R FPEI      L  + LEGTAI+ LP+SI+ L    +  L +CKNL ++P 
Sbjct: 96  FLNGCSSLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPD 155

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETL-GKVESLEVRLSSWN 810
           +IN LR L+ +   GCS L+   + L G    +E+ LS  N
Sbjct: 156 SINDLRCLKRLILPGCSNLEKFPKNLEGLCTLVELDLSHCN 196



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 26/155 (16%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +        +GT I+EL  +I+ L  L  L L+ CKNL  +P +I+ L+ L  
Sbjct: 106 FPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCLKR 165

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHL------EG---TAIRGLPASIEL-LSGNILSNL 759
           L L G S   +FP+       L+E+ L      EG   T I GL +   L LSGN     
Sbjct: 166 LILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLCTLNLSGN----- 220

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
               ++ S+PS I  L  LR++  S C  L+ + E
Sbjct: 221 ----HMVSIPSGITQLCRLRLLDISHCKMLQEIPE 251


>gi|357500597|ref|XP_003620587.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|357500703|ref|XP_003620640.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495602|gb|AES76805.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495655|gb|AES76858.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1094

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 210/468 (44%), Gaps = 54/468 (11%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N   LP  +  L    +LEL       +FP       +L KL L+G  ++ E+  SI LL
Sbjct: 620  NKKYLP-NLKHLDLRHSLELVKILDFGEFP-------NLEKLNLEGCINLVELDPSIGLL 671

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L  L L ECKNLV +P++I  L SL+ LN+ GC K+   P  L K   + E      +
Sbjct: 672  RKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYGCSKVFKNPMHLKKKHDISESASHSRS 731

Query: 159  IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
            +      I L  +LR   FS     P   ++                  +LPSL  +  L
Sbjct: 732  MSSVFKWIMLPHHLR---FSA----PTRHTY------------------LLPSLHSLVCL 766

Query: 219  TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
              +D+S C L +  +P  I+ L+SL+ L L  NNFVTLP S+  L  L  L L+ C  L+
Sbjct: 767  RDVDISFCHLSQ--VPDAIECLYSLERLNLEGNNFVTLP-SLRKLSKLVYLNLQHCMLLE 823

Query: 279  SLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYL 338
            SLPQ+P     +R N     +   G          I NC    +  R + +  S L +++
Sbjct: 824  SLPQLPSPTNIIRENNKYFWIWPTGLF--------IFNCPKLGERERCSSMTFSWLTQFI 875

Query: 339  ELQAVSDPG--HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLY-NVNKVVGFAICCVF 395
            E  + S P     + IV PG++IP W   ++ G SI + R   ++ N N ++GF  C VF
Sbjct: 876  EANSQSYPTSFDWIQIVTPGNEIPIWINNKSVGDSIQIDRSPIMHDNNNYIIGFLCCAVF 935

Query: 396  QVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQ 455
             +   +   ++F        +  +  S     +   G      S HLW+++ PR  ++ +
Sbjct: 936  SM---APDCWMFPFAQEWTDKKLIRMSCRSATVILNGGLVMTKSSHLWIIYFPRESYS-E 991

Query: 456  FESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTS 503
            FE   I  +     D + +VK CG+  +   +++EF+ T      F +
Sbjct: 992  FEK--IHFNIFEGEDFSLEVKSCGYRWVCKEDLQEFNLTMMNQENFLA 1037



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G  ++ E+  SI LL  L  L L  CKNL S+P  I SL  L  L + GCSK
Sbjct: 649 NLEKLNLEGCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYGCSK 708

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           + K P  +    D+S+      S++ V   I +LP   L +    ++   LP S++ L  
Sbjct: 709 VFKNPMHLKKKHDISESASHSRSMSSVFKWI-MLPH-HLRFSAPTRHTYLLP-SLHSLVC 765

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L+ +++S  C L  VPD +  + SLE L++ G 
Sbjct: 766 LRDVDIS-FCHLSQVPDAIECLYSLERLNLEGN 797



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 15/114 (13%)

Query: 683 LVQLTLNGCKNLERL---PRTISALKYLS---TLNLSGLSKFREFPEITSSRDQLLEIHL 736
           LV+L L   K +E+L    + +  LK+L    +L L  +  F EFP        L +++L
Sbjct: 604 LVELILKSSK-IEQLWTNKKYLPNLKHLDLRHSLELVKILDFGEFP-------NLEKLNL 655

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           EG   +  L  SI LL   +  NL +CKNL S+P+ I  L SL  +   GCSK+
Sbjct: 656 EGCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYGCSKV 709



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 656 EFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           EFP++ ++  +G  ++ EL  +I LL  LV L L  CKNL  +P  I +L  L  LN+ G
Sbjct: 646 EFPNLEKLNLEGCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYG 705

Query: 715 LSKFREFP 722
            SK  + P
Sbjct: 706 CSKVFKNP 713


>gi|147859369|emb|CAN83953.1| hypothetical protein VITISV_018322 [Vitis vinifera]
          Length = 996

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 199/420 (47%), Gaps = 61/420 (14%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP----VTI----------- 48
           MK L  L    + I E+PSSI  LT LE L L  C      P    VT+           
Sbjct: 505 MKFLRVLNFRESGIRELPSSIGSLTSLESLWLSKCSKFEKFPDNFFVTMRRLRILGLSDS 564

Query: 49  ------SSLKCLRTLE---LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
                 +S++CL  LE   L  CS  +KFP+I  +ME+L +L L+ + I E+   I  LP
Sbjct: 565 GIKELPTSIECLEALEVLLLDNCSNFEKFPEIQKNMENLDRLNLEDSGIKELSCLIGHLP 624

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            L  L L++CKNL  +PS I  L+SL+   L  C  L      +  +E  + L +  +AI
Sbjct: 625 RLVSLELSKCKNLRSVPSGILQLESLRMCYLFDCSNL-----IMEDMEHSKGLSLRESAI 679

Query: 160 RRPTSSIFLM----KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV 215
               SSI LM    +NL +L        P S         + L   +CP    LP     
Sbjct: 680 TELPSSIRLMLSNCENLETL--------PNSIG---MTRVSELVVHNCPKLHKLPDNLRS 728

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             LT+L++S C L   AIP D+  L SLK+L ++ NN   +P  I  L  L  L + +C 
Sbjct: 729 MQLTELNVSGCNLMAGAIPDDLWCLFSLKDLNVSGNNIDCIPGGIIRLSRLRYLTMNNCL 788

Query: 276 RLQSLPQIPPNLQFVRANGCSSLVTLFGALK--LCRSKYTIINCIDS-LKLLRKNGLAIS 332
            L+ +P++P +L+ + A GC  L TL    K  L  S +   NC+ S ++       +  
Sbjct: 789 MLKEIPELPSSLRQIEAYGCPLLETLSSDAKHPLWSSLH---NCLKSRIQDFECPTDSED 845

Query: 333 MLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
            +R+YL++Q          +V PGS+ IP+W  +++ G  IT+  P   Y  N  +GFA+
Sbjct: 846 WIRKYLDVQ----------VVIPGSRGIPEWISHKSMGHEITIDLPKNWYEDNNFLGFAL 895



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 2/115 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L L   S F +FPEI  + + L  ++LE + I+ L   I  L  
Sbjct: 566 IKELPTSIECLEALEVLLLDNCSNFEKFPEIQKNMENLDRLNLEDSGIKELSCLIGHLPR 625

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
            +   L  CKNL+S+PS I  L SLRM Y   CS L  + E +   + L +R S+
Sbjct: 626 LVSLELSKCKNLRSVPSGILQLESLRMCYLFDCSNL--IMEDMEHSKGLSLRESA 678



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 24/172 (13%)

Query: 646 NCSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           NCS      ++FP+I + +        + + I+ELS  I  L  LV L L+ CKNL  +P
Sbjct: 586 NCSNF----EKFPEIQKNMENLDRLNLEDSGIKELSCLIGHLPRLVSLELSKCKNLRSVP 641

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
             I  L+ L    L   S       I    +    + L  +AI  LP+SI L+       
Sbjct: 642 SGILQLESLRMCYLFDCSNL-----IMEDMEHSKGLSLRESAITELPSSIRLM------- 689

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWN 810
           L +C+NL++LP++I G+  +  +    C KL  + + L  ++  E+ +S  N
Sbjct: 690 LSNCENLETLPNSI-GMTRVSELVVHNCPKLHKLPDNLRSMQLTELNVSGCN 740



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 15/167 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+    L L  ++ITE+PSSI L+       L  C+NL +LP +I   + +  L + 
Sbjct: 663 MEDMEHSKGLSLRESAITELPSSIRLM-------LSNCENLETLPNSIGMTR-VSELVVH 714

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSI--AEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            C KL K P  + SM+ L++L + G ++    +P  +  L  L+ L ++   N+  +P  
Sbjct: 715 NCPKLHKLPDNLRSMQ-LTELNVSGCNLMAGAIPDDLWCLFSLKDLNVSG-NNIDCIPGG 772

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS 165
           I  L  L+ L ++ C  L+ +P+      SL +++  G  +    SS
Sbjct: 773 IIRLSRLRYLTMNNCLMLKEIPEL---PSSLRQIEAYGCPLLETLSS 816


>gi|42569093|ref|NP_179297.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251486|gb|AEC06580.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1355

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 208/432 (48%), Gaps = 32/432 (7%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            +L +LYL GTSI EVPSSI  LT L +   + CK L  LP+ + +L  L  L LSGCS+L
Sbjct: 599  NLKELYLAGTSIREVPSSICHLTQLVVFDAENCKKLQDLPMGMGNLISLTMLILSGCSEL 658

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            +  P +     +L  L L  T I ++PSS E L  L  L LN C+ L  L   +   +S+
Sbjct: 659  RSIPDLP---RNLRHLNLAETPIKKLPSSFEDLTKLVSLDLNHCERLQHL--QMESFESV 713

Query: 126  KTLNLSGCCKLENVPD-TLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSLYFSGCNE 182
              ++LSGC +L+ +   +L  +  L E       +    P +   +++  R+ + +   E
Sbjct: 714  VRVDLSGCLELKYILGFSLQDITQLHEDGTDKVMLHGTPPCNVTLILETWRTRHVTPM-E 772

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPS--LTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
               S  +   +PF      + P    L S  +  + ++  L LS   L +  IP +I NL
Sbjct: 773  KSGSKFYLKLMPF-----VTTPYRSKLQSSLVFRMYAMVSLFLSKAYLLDIHIPQEICNL 827

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
             SLK L L+ NNF  LP SI    NLE L L  CK L+SLP++P +L+F+ A+GC  L  
Sbjct: 828  LSLKTLDLSGNNFGKLPESIKQFRNLESLILCHCKNLESLPELPQSLEFLNAHGCVCLKN 887

Query: 301  LFGALKLCRSKYTIINCID-SLKLLRK--NGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
            +  + +      T  NC + S  ++R+        M+ ++   + +  P    S+  P  
Sbjct: 888  IHRSFQQFPRHCTFSNCFEISPDIVREILEARVAQMVIDHTLQKLIEAPAFSFSV--PAF 945

Query: 358  QIPKWFMYQNEGSSITVT-RPSYLYNVNKVVGFAI--CCVFQVPKHSTG----TYLFHSY 410
            + P +  + N GSS+ +   PS    +  ++GF I     F    +S      +++F  Y
Sbjct: 946  RDPNYIFHLNRGSSVMIRLTPS----IETLLGFQISVAVAFWNDSYSNAGFGISHMFIFY 1001

Query: 411  PAHELECSMDGS 422
                  C +DG+
Sbjct: 1002 DVSMHPCVVDGN 1013



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 132/305 (43%), Gaps = 61/305 (20%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP----------------- 69
           L  L+++ L   ++L  +   I S K +  ++L GC+K++ FP                 
Sbjct: 458 LEMLKMVRLSHSQDLVEIEELIKS-KNIEVIDLQGCTKIQSFPATRHLQHLRVINLSGCV 516

Query: 70  --------QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
                   +      +L +LYL GT I EV SSI  L  LE+L L+ CK L  LP     
Sbjct: 517 EIKSTQLEEFQGFPRNLKELYLSGTGIREVTSSIH-LSSLEVLDLSNCKRLQNLPMGKGN 575

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL  L LSGC KL+N+ D      +L+EL ++GT+IR   SSI  +  L  + F   N
Sbjct: 576 LASLIKLMLSGCSKLQNIQDL---PTNLKELYLAGTSIREVPSSICHLTQL--VVFDAEN 630

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                C     LP   G + SLT L LS C    + + S  D  
Sbjct: 631 ---------------------CKKLQDLPMGMGNLISLTMLILSGC----SELRSIPDLP 665

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN--GCSSL 298
            +L+ L L       LP+S   L  L  L+L  C+RLQ L Q+      VR +  GC  L
Sbjct: 666 RNLRHLNLAETPIKKLPSSFEDLTKLVSLDLNHCERLQHL-QMESFESVVRVDLSGCLEL 724

Query: 299 VTLFG 303
             + G
Sbjct: 725 KYILG 729



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 85/144 (59%), Gaps = 5/144 (3%)

Query: 652 EEADEFP-DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           EE   FP ++ ++   GT IRE++ +I L   L  L L+ CK L+ LP     L  L  L
Sbjct: 524 EEFQGFPRNLKELYLSGTGIREVTSSIHL-SSLEVLDLSNCKRLQNLPMGKGNLASLIKL 582

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
            LSG SK +   ++ ++   L E++L GT+IR +P+SI  L+  ++ + ++CK L+ LP 
Sbjct: 583 MLSGCSKLQNIQDLPTN---LKELYLAGTSIREVPSSICHLTQLVVFDAENCKKLQDLPM 639

Query: 771 TINGLRSLRMMYPSGCSKLKNVTE 794
            +  L SL M+  SGCS+L+++ +
Sbjct: 640 GMGNLISLTMLILSGCSELRSIPD 663



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 5/146 (3%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS+L    D   ++ ++   GT IRE+  +I  L  LV      CK L+ LP  +  L  
Sbjct: 587 CSKLQNIQDLPTNLKELYLAGTSIREVPSSICHLTQLVVFDAENCKKLQDLPMGMGNLIS 646

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L+ L LSG S+ R  P++  +   L  ++L  T I+ LP+S E L+  +  +L  C+ L+
Sbjct: 647 LTMLILSGCSELRSIPDLPRN---LRHLNLAETPIKKLPSSFEDLTKLVSLDLNHCERLQ 703

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNV 792
            L   +    S+  +  SGC +LK +
Sbjct: 704 HL--QMESFESVVRVDLSGCLELKYI 727


>gi|224144416|ref|XP_002325283.1| predicted protein [Populus trichocarpa]
 gi|222862158|gb|EEE99664.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 195/396 (49%), Gaps = 47/396 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           + DL  L +  +++ ++    ++L  L++L L   K L   P     L CL  L L+GC 
Sbjct: 44  LNDLVILDMQESNVRKLWKGTKILNKLKILNLSYSKYLDETP-NFRELSCLERLILTGC- 101

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
                                 TS+ +V  SI  L  L LL L+ C +L  LP S+  LK
Sbjct: 102 ----------------------TSLVKVHQSIGNLKSLVLLNLHYCDSLKTLPESMGNLK 139

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE- 182
           SL+TLN++ C +LE +P++LG +ESL EL   GTAI++  +S   +K L  L F G N+ 
Sbjct: 140 SLQTLNVTQCRQLEKLPESLGDIESLTELFTKGTAIKQLPTSARYLKKLTKLSFGGYNKV 199

Query: 183 --PPASASWHLHLPFNL-LGKSSCPVA-LMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
              P   S      F+L L   +C  +  MLP+      SL +L+LS  GL EA    D+
Sbjct: 200 FYSPDLPSKSRFSRFSLWLSPRNCSSSNAMLPAFFNSFSSLKELNLSYAGLSEATSSIDL 259

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
            +L  L++L L+ N F  LP+ IS L  L+ L +E C  L S+P++P ++ F+  N C+S
Sbjct: 260 GSLSFLEDLDLSGNKFFNLPSGISLLPKLQCLRVEKCSNLLSIPELPSSVLFLSINDCTS 319

Query: 298 LVTLFGAL----------KLCRSKYTI--INCI-DSLKLLRKNGLAISMLREYLELQAVS 344
           +  +   L          K CR+   I  + C  ++  +L  NG   S L E  ++  + 
Sbjct: 320 IERVSAPLQHERLPLLNVKGCRNLIEIQGMECAGNNWSILNLNG--CSNLSENYKMSLIQ 377

Query: 345 D--PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
               G    I   G +IP+WF ++ EGS+++   PS
Sbjct: 378 GLCKGKHYDICLAGGEIPEWFSHRGEGSALSFILPS 413



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 7/104 (6%)

Query: 655 DEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           DE P+  +       +L+  T + ++  +I  L  LV L L+ C +L+ LP ++  LK L
Sbjct: 82  DETPNFRELSCLERLILTGCTSLVKVHQSIGNLKSLVLLNLHYCDSLKTLPESMGNLKSL 141

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
            TLN++   +  + PE     + L E+  +GTAI+ LP S   L
Sbjct: 142 QTLNVTQCRQLEKLPESLGDIESLTELFTKGTAIKQLPTSARYL 185



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 33/185 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGC---------------------- 38
           +  ++ L++L+  GT+I ++P+S   L  L  L+  G                       
Sbjct: 159 LGDIESLTELFTKGTAIKQLPTSARYLKKLTKLSFGGYNKVFYSPDLPSKSRFSRFSLWL 218

Query: 39  --KNLSS----LPVTISSLKCLRTLELSGCSKLKKFPQI-VASMEDLSKLYLDGTSIAEV 91
             +N SS    LP   +S   L+ L LS     +    I + S+  L  L L G     +
Sbjct: 219 SPRNCSSSNAMLPAFFNSFSSLKELNLSYAGLSEATSSIDLGSLSFLEDLDLSGNKFFNL 278

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
           PS I LLP L+ L + +C NL+ +P   +   S+  L+++ C  +E V   L + E L  
Sbjct: 279 PSGISLLPKLQCLRVEKCSNLLSIPELPS---SVLFLSINDCTSIERVSAPL-QHERLPL 334

Query: 152 LDVSG 156
           L+V G
Sbjct: 335 LNVKG 339



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 6/113 (5%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEIT--SSRDQLLEIHLEG-TAIRGLPASIE 749
           N+ +L +    L  L  LNLS      E P     S  ++L+   L G T++  +  SI 
Sbjct: 56  NVRKLWKGTKILNKLKILNLSYSKYLDETPNFRELSCLERLI---LTGCTSLVKVHQSIG 112

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L   +L NL  C +LK+LP ++  L+SL+ +  + C +L+ + E+LG +ESL
Sbjct: 113 NLKSLVLLNLHYCDSLKTLPESMGNLKSLQTLNVTQCRQLEKLPESLGDIESL 165


>gi|104647025|gb|ABF74136.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 204/450 (45%), Gaps = 79/450 (17%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL  T I E PSSI  L+ L  L +  C+ L +LP  +  L  L++L L GC +L+  P
Sbjct: 143 LYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 70  QIVASMEDLSKLYLDG---------------------TSIAEVPSSIELLPGLELLYLNE 108
             + ++  L  L + G                     TSI E+P+ I  L  L  L ++E
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISE 262

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPDTLG 144
            K L  LP SI+ L+SL+ L LSGC  LE+                        +P+ +G
Sbjct: 263 NKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIG 322

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            + +LE L  S T IRR   SI  +  L+ L                  P  LL      
Sbjct: 323 NLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS---- 368

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              + P L+    L  L LS+  +      + I NL +L EL L+ NNF  +PASI  L 
Sbjct: 369 ---LCPPLSRFDDLRALSLSNMNMTXXX--NSIGNLWNLLELDLSGNNFEFIPASIKRLT 423

Query: 265 NLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
            L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G    C ++Y +   + S   
Sbjct: 424 RLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISG----CFNQYFLRKLVAS-NC 478

Query: 324 LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV 383
            + +  A  ++   L+L++ + P H     FPGS IP  F +Q  G S+ +  P    + 
Sbjct: 479 YKLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS-ESS 533

Query: 384 NKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           + ++GF+ C +  V     G Y  ++   H
Sbjct: 534 SDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I   P+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 638 RQSPQEPGNCSRLW---EEADEFPDIVQVLS--------DGTDIRELSLAIELLFGLVQL 686
           +  P+   N  RL+    + +EFP  +  LS        D   +R L   +  L  L  L
Sbjct: 131 KHFPEISWNTRRLYLSSTKIEEFPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSL 190

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
            L+GC+ LE LP T+  L  L TL +SG     EFP +++S + L    +  T+I  +PA
Sbjct: 191 NLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVL---RISETSIEEIPA 247

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            I  LS     ++ + K L SLP +I+ LRSL  +  SGCS L++
Sbjct: 248 RICNLSQLRSLDISENKRLASLPVSISELRSLEKLKLSGCSVLES 292



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCM----SNSNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EEFPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326


>gi|147863085|emb|CAN78783.1| hypothetical protein VITISV_038766 [Vitis vinifera]
          Length = 439

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 179/392 (45%), Gaps = 51/392 (13%)

Query: 4   MKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           M +L  L L D  S+  V  SI  L  L  L L+GCKNL+SLP ++  L  L+T  L  C
Sbjct: 1   MPNLEKLELADCMSLNVVDPSIGDLKNLTSLNLRGCKNLTSLPSSLQYLDSLKTFHLDYC 60

Query: 63  SKLKKFPQIVAS-MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           S L++FP++  S M+ LS L+L G  I E+PSSIELL  L+ LYL+ CKNL  LPSSI  
Sbjct: 61  SNLEEFPEMKGSPMKALSYLHLGGCGIKELPSSIELLTELQCLYLSNCKNLRSLPSSICR 120

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           LKSL  L+L  C  L+  P+    ++ L  LD+ G  I+   SS  L K+LR L  S C 
Sbjct: 121 LKSLGILSLDDCSNLDTFPEITEDMKYLGILDLRGIGIKELPSSQNL-KSLRRLDISNCL 179

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                + ++L    +L  +  C      P +  G C L +LDLS C              
Sbjct: 180 VTLPDSIYNLRSLEDLTLRGCCSNLEKFPKNPEGFCYLERLDLSHC-------------- 225

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
                     N  V +P+  S L  L  L++  CK+L  +P +P +L+ + A+ C+ L  
Sbjct: 226 ----------NVMVGIPSGFSQLCKLRYLDISHCKKLLDIPDLPSSLREIDAHYCTKLEM 275

Query: 301 LFGALKLCRSKYT-IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           L     L  S      N   +  L  K G                       ++     I
Sbjct: 276 LSSPSSLLWSSLLKWFNPTSNEHLNCKEG----------------------KMILINGGI 313

Query: 360 PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
           P W  +Q  GS + +  P   Y  +  +GFA 
Sbjct: 314 PGWVFHQEIGSQVRIEPPPNWYEDDHFLGFAF 345



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 4/146 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L+D   +  +  +I  L  L  L L GCKNL  LP ++  L  L T +L   S   EFPE
Sbjct: 9   LADCMSLNVVDPSIGDLKNLTSLNLRGCKNLTSLPSSLQYLDSLKTFHLDYCSNLEEFPE 68

Query: 724 ITSSRDQLLE-IHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +  S  + L  +HL G  I+ LP+SIELL+      L +CKNL+SLPS+I  L+SL ++ 
Sbjct: 69  MKGSPMKALSYLHLGGCGIKELPSSIELLTELQCLYLSNCKNLRSLPSSICRLKSLGILS 128

Query: 783 PSGCSKLKN---VTETLGKVESLEVR 805
              CS L     +TE +  +  L++R
Sbjct: 129 LDDCSNLDTFPEITEDMKYLGILDLR 154



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 74/140 (52%), Gaps = 11/140 (7%)

Query: 655 DEFPDI----VQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           +EFP++    ++ LS     G  I+EL  +IELL  L  L L+ CKNL  LP +I  LK 
Sbjct: 64  EEFPEMKGSPMKALSYLHLGGCGIKELPSSIELLTELQCLYLSNCKNLRSLPSSICRLKS 123

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L  L+L   S    FPEIT     L  + L G  I+ LP+S  L S   L ++ +C  L 
Sbjct: 124 LGILSLDDCSNLDTFPEITEDMKYLGILDLRGIGIKELPSSQNLKSLRRL-DISNC--LV 180

Query: 767 SLPSTINGLRSLRMMYPSGC 786
           +LP +I  LRSL  +   GC
Sbjct: 181 TLPDSIYNLRSLEDLTLRGC 200



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 1   MASMKDLSDLYLDG--TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLE 58
           + +++ L DL L G  +++ + P + E    LE L L  C  +  +P   S L  LR L+
Sbjct: 186 IYNLRSLEDLTLRGCCSNLEKFPKNPEGFCYLERLDLSHCNVMVGIPSGFSQLCKLRYLD 245

Query: 59  LSGCSKLKKFPQIVASMEDLSKLY 82
           +S C KL   P + +S+ ++   Y
Sbjct: 246 ISHCKKLLDIPDLPSSLREIDAHY 269


>gi|225460157|ref|XP_002276248.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1253

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 251/492 (51%), Gaps = 59/492 (11%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            L++++LS  ++L + P   + + +L +L L G  S+ ++ +SI +L  L+LL L +CK L
Sbjct: 629  LKSIDLSHSTRLTETPNF-SGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKML 687

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              L  SI  L SL+TL +SGCCKL+  P+ LGK+E L+EL    TA+    SS+  +KNL
Sbjct: 688  KSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNL 747

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
             +  F G   P  +       P ++L   S  +  +LP ++G+ SL KL+LSD  + + A
Sbjct: 748  ETFSFQGRKGPSPA-------PSSMLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGA 800

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
              SD+  L SLK L LN NNF TLP  IS L  L  LE ++C+RLQ+LP++P ++ ++ A
Sbjct: 801  RLSDLGLLSSLKILILNGNNFDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGA 860

Query: 293  NGCSSL-----VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
            + C+SL      +LF +L + +              L+++    S L    E Q  +   
Sbjct: 861  HNCTSLEAVSNQSLFSSLMIAK--------------LKEHPRRTSQLEHDSEGQLSA--- 903

Query: 348  HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
               ++V PGS IP W  YQ+ G  +TV  P   +     + FA C V      ++ + L 
Sbjct: 904  -AFTVVAPGSGIPDWISYQSSGREVTVKLPPNWF-TTYFLAFASCVV------TSPSVLP 955

Query: 408  HSYPAHEL--ECSM-----DGSGEGHYIYFRGKF-GHVVSDHLWLLFLPRHGHNWQFESN 459
            ++   +EL  +C++           + ++ R    G + SDH+WL ++         E  
Sbjct: 956  YADSINELCTKCTVFYSTSSCVSSSYDVFPRSHAEGRMESDHVWLRYVRFPISINCHEVT 1015

Query: 460  LIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDE--TTKQSTRFTSCNLNEVHHDFVGSN 517
             I+ SF  I   +  +KRCG   +Y ++ E ++     + ++ F+  NL E+H       
Sbjct: 1016 HIKFSFEMILGTSSAIKRCGVGLVYGNDDENYNNPGMIQFNSIFSPPNL-EIHD------ 1068

Query: 518  MEVAQASGSGSS 529
                + SGSG S
Sbjct: 1069 ---GEPSGSGCS 1077



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G  S+ ++ +SI +L  L+LL L+ CK L SL  +I  L  L+TL +
Sbjct: 646 FSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVV 705

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGC KLKKFP+ +  +E L +LY D T++ EVPSS+  L  LE       K     PSS+
Sbjct: 706 SGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRKGPSPAPSSM 765



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLS 752
           +++L +    ++ L +++LS  ++  E P  +   + L ++ L+G  ++R L  SI +L+
Sbjct: 616 VQQLWKGSKGMEKLKSIDLSHSTRLTETPNFSGVVN-LEQLILQGCISLRKLHTSIGVLN 674

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              L NL+DCK LKSL  +I  L SL+ +  SGC KLK   E LGK+E L+
Sbjct: 675 KLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLK 725



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L     +R+L  +I +L  L  L L  CK L+ L  +I  L  L TL +SG  K ++FP
Sbjct: 656 ILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFP 715

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           E     + L E++ + TA+  +P+S+  L      + +  K     PS++   RS  M +
Sbjct: 716 ENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRKGPSPAPSSMLRTRSDSMGF 775


>gi|334186704|ref|NP_193687.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658794|gb|AEE84194.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1744

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 170/340 (50%), Gaps = 32/340 (9%)

Query: 5    KDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            ++L  LYL  T+I EVPSS+   ++ L  L ++ C+ L  LP+ +S++K L  L+LSGCS
Sbjct: 755  QNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCS 814

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGL 122
             L+   ++     +L +LYL GT++ E PS++ E L  + LL L  CK L  LP+ ++ L
Sbjct: 815  NLENIKELP---RNLKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKL 871

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            + L  L LSGC KLE + D      +L EL ++GTAIR    SI  +  L +L    CN 
Sbjct: 872  EFLVMLKLSGCSKLEIIVDL---PLNLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNR 928

Query: 183  -PPASASWHLHLPFNLLGKSSC-------------------PVALMLPSLTGVCSLT--- 219
                    H   P  +L  S+C                   P  ++L S    C      
Sbjct: 929  LRHLPMEMHNLNPLKVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYE 988

Query: 220  -KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
             ++ LS        IP +I  + SLK L L+RN F  +P SI     L  L L  C+ L+
Sbjct: 989  HRVTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLR 1048

Query: 279  SLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCI 318
            SLPQ+P +LQ + A+GCSSL  +    K     YT  NC 
Sbjct: 1049 SLPQLPRSLQLLNAHGCSSLQLITPDFKQLPRYYTFSNCF 1088



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 134/283 (47%), Gaps = 39/283 (13%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           +E + LKGC  L S P T   L+ LR ++LS C K+K FP++  S+    KL+L GT I 
Sbjct: 628 IEKIDLKGCLELQSFPDT-GQLQHLRIVDLSTCKKIKSFPKVPPSIR---KLHLQGTGIR 683

Query: 90  EVPSSIELLPGLELLYLNECKNLVRL---PSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           ++ S         L + +E + L R     SS N     + L L     L ++PD +   
Sbjct: 684 DLSS---------LNHSSESQRLTRKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIV-IF 733

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCNEPPASASWHLHLPFNLLGKSSCP 204
           ESLE LD SG +           +NL+ LY +     E P+S   H+      L   +C 
Sbjct: 734 ESLEVLDFSGCSELEDIQG--FPQNLKRLYLAKTAIKEVPSSLCHHIS-KLVKLDMENCE 790

Query: 205 VALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNL----HSLKELYLNRNNFVTLPAS 259
               LP  ++ +  L  L LS C        S+++N+     +LKELYL        P++
Sbjct: 791 RLRDLPMGMSNMKYLAVLKLSGC--------SNLENIKELPRNLKELYLAGTAVKEFPST 842

Query: 260 -ISGLLNLEELELEDCKRLQSLPQIPPNLQF---VRANGCSSL 298
            +  L  +  L+LE+CK+LQ LP     L+F   ++ +GCS L
Sbjct: 843 LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 6/158 (3%)

Query: 647 CSRLWEEADEFP-DIVQVLSDGTDIREL-SLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           CS L E   E P ++ ++   GT ++E  S  +E L  +V L L  CK L+ LP  +S L
Sbjct: 813 CSNL-ENIKELPRNLKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKL 871

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           ++L  L LSG SK     ++  +   L+E++L GTAIR LP SI  L+     +LK+C  
Sbjct: 872 EFLVMLKLSGCSKLEIIVDLPLN---LIELYLAGTAIRELPPSIGDLALLDTLDLKNCNR 928

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L+ LP  ++ L  L+++  S CS+L+  T +L KV  L
Sbjct: 929 LRHLPMEMHNLNPLKVLDLSNCSELEVFTSSLPKVREL 966



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 89/151 (58%), Gaps = 7/151 (4%)

Query: 647 CSRLWEEADEFP-DIVQVLSDGTDIRELSLAI-ELLFGLVQLTLNGCKNLERLPRTISAL 704
           CS L E+   FP ++ ++    T I+E+  ++   +  LV+L +  C+ L  LP  +S +
Sbjct: 744 CSEL-EDIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNM 802

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS-IELLSGNILSNLKDCK 763
           KYL+ L LSG S      E+  +   L E++L GTA++  P++ +E LS  +L +L++CK
Sbjct: 803 KYLAVLKLSGCSNLENIKELPRN---LKELYLAGTAVKEFPSTLLETLSEVVLLDLENCK 859

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            L+ LP+ ++ L  L M+  SGCSKL+ + +
Sbjct: 860 KLQGLPTGMSKLEFLVMLKLSGCSKLEIIVD 890



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 5/110 (4%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L    +L  LP  I   + L  L+ SG S   E  +I      L  ++L  TAI+ +P
Sbjct: 716 LKLKDSSHLGSLP-DIVIFESLEVLDFSGCS---ELEDIQGFPQNLKRLYLAKTAIKEVP 771

Query: 746 ASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +S+   +S  +  ++++C+ L+ LP  ++ ++ L ++  SGCS L+N+ E
Sbjct: 772 SSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCSNLENIKE 821



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 23/126 (18%)

Query: 685 QLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
           ++ L GC  L+  P T   L++L  ++LS   K + FP++  S   + ++HL+GT IR L
Sbjct: 630 KIDLKGCLELQSFPDT-GQLQHLRIVDLSTCKKIKSFPKVPPS---IRKLHLQGTGIRDL 685

Query: 745 PA------------SIELLSGN------ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            +             +E +S +       +  LKD  +L SLP  +    SL ++  SGC
Sbjct: 686 SSLNHSSESQRLTRKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIVI-FESLEVLDFSGC 744

Query: 787 SKLKNV 792
           S+L+++
Sbjct: 745 SELEDI 750


>gi|2853079|emb|CAA16929.1| resistance protein RPP5-like [Arabidopsis thaliana]
 gi|7268748|emb|CAB78954.1| resistance protein RPP5-like [Arabidopsis thaliana]
          Length = 1715

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 170/340 (50%), Gaps = 32/340 (9%)

Query: 5    KDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            ++L  LYL  T+I EVPSS+   ++ L  L ++ C+ L  LP+ +S++K L  L+LSGCS
Sbjct: 730  QNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCS 789

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGL 122
             L+   ++     +L +LYL GT++ E PS++ E L  + LL L  CK L  LP+ ++ L
Sbjct: 790  NLENIKELP---RNLKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKL 846

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            + L  L LSGC KLE + D      +L EL ++GTAIR    SI  +  L +L    CN 
Sbjct: 847  EFLVMLKLSGCSKLEIIVDL---PLNLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNR 903

Query: 183  -PPASASWHLHLPFNLLGKSSC-------------------PVALMLPSLTGVCSLT--- 219
                    H   P  +L  S+C                   P  ++L S    C      
Sbjct: 904  LRHLPMEMHNLNPLKVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYE 963

Query: 220  -KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
             ++ LS        IP +I  + SLK L L+RN F  +P SI     L  L L  C+ L+
Sbjct: 964  HRVTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLR 1023

Query: 279  SLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCI 318
            SLPQ+P +LQ + A+GCSSL  +    K     YT  NC 
Sbjct: 1024 SLPQLPRSLQLLNAHGCSSLQLITPDFKQLPRYYTFSNCF 1063



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 134/283 (47%), Gaps = 39/283 (13%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           +E + LKGC  L S P T   L+ LR ++LS C K+K FP++  S+    KL+L GT I 
Sbjct: 603 IEKIDLKGCLELQSFPDT-GQLQHLRIVDLSTCKKIKSFPKVPPSIR---KLHLQGTGIR 658

Query: 90  EVPSSIELLPGLELLYLNECKNLVRL---PSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           ++ S         L + +E + L R     SS N     + L L     L ++PD +   
Sbjct: 659 DLSS---------LNHSSESQRLTRKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIV-IF 708

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCNEPPASASWHLHLPFNLLGKSSCP 204
           ESLE LD SG +           +NL+ LY +     E P+S   H+      L   +C 
Sbjct: 709 ESLEVLDFSGCSELEDIQG--FPQNLKRLYLAKTAIKEVPSSLCHHIS-KLVKLDMENCE 765

Query: 205 VALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNL----HSLKELYLNRNNFVTLPAS 259
               LP  ++ +  L  L LS C        S+++N+     +LKELYL        P++
Sbjct: 766 RLRDLPMGMSNMKYLAVLKLSGC--------SNLENIKELPRNLKELYLAGTAVKEFPST 817

Query: 260 -ISGLLNLEELELEDCKRLQSLPQIPPNLQF---VRANGCSSL 298
            +  L  +  L+LE+CK+LQ LP     L+F   ++ +GCS L
Sbjct: 818 LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 860



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 6/158 (3%)

Query: 647 CSRLWEEADEFP-DIVQVLSDGTDIREL-SLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           CS L E   E P ++ ++   GT ++E  S  +E L  +V L L  CK L+ LP  +S L
Sbjct: 788 CSNL-ENIKELPRNLKELYLAGTAVKEFPSTLLETLSEVVLLDLENCKKLQGLPTGMSKL 846

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           ++L  L LSG SK     ++  +   L+E++L GTAIR LP SI  L+     +LK+C  
Sbjct: 847 EFLVMLKLSGCSKLEIIVDLPLN---LIELYLAGTAIRELPPSIGDLALLDTLDLKNCNR 903

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L+ LP  ++ L  L+++  S CS+L+  T +L KV  L
Sbjct: 904 LRHLPMEMHNLNPLKVLDLSNCSELEVFTSSLPKVREL 941



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 89/151 (58%), Gaps = 7/151 (4%)

Query: 647 CSRLWEEADEFP-DIVQVLSDGTDIRELSLAI-ELLFGLVQLTLNGCKNLERLPRTISAL 704
           CS L E+   FP ++ ++    T I+E+  ++   +  LV+L +  C+ L  LP  +S +
Sbjct: 719 CSEL-EDIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLPMGMSNM 777

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS-IELLSGNILSNLKDCK 763
           KYL+ L LSG S      E+  +   L E++L GTA++  P++ +E LS  +L +L++CK
Sbjct: 778 KYLAVLKLSGCSNLENIKELPRN---LKELYLAGTAVKEFPSTLLETLSEVVLLDLENCK 834

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            L+ LP+ ++ L  L M+  SGCSKL+ + +
Sbjct: 835 KLQGLPTGMSKLEFLVMLKLSGCSKLEIIVD 865



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 5/110 (4%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L    +L  LP  I   + L  L+ SG S   E  +I      L  ++L  TAI+ +P
Sbjct: 691 LKLKDSSHLGSLP-DIVIFESLEVLDFSGCS---ELEDIQGFPQNLKRLYLAKTAIKEVP 746

Query: 746 ASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +S+   +S  +  ++++C+ L+ LP  ++ ++ L ++  SGCS L+N+ E
Sbjct: 747 SSLCHHISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSGCSNLENIKE 796



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 23/126 (18%)

Query: 685 QLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
           ++ L GC  L+  P T   L++L  ++LS   K + FP++  S   + ++HL+GT IR L
Sbjct: 605 KIDLKGCLELQSFPDT-GQLQHLRIVDLSTCKKIKSFPKVPPS---IRKLHLQGTGIRDL 660

Query: 745 PA------------SIELLSGN------ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            +             +E +S +       +  LKD  +L SLP  +    SL ++  SGC
Sbjct: 661 SSLNHSSESQRLTRKLENVSSSNQDHRKQVLKLKDSSHLGSLPDIVI-FESLEVLDFSGC 719

Query: 787 SKLKNV 792
           S+L+++
Sbjct: 720 SELEDI 725


>gi|297741031|emb|CBI31343.3| unnamed protein product [Vitis vinifera]
          Length = 1239

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 251/492 (51%), Gaps = 59/492 (11%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            L++++LS  ++L + P   + + +L +L L G  S+ ++ +SI +L  L+LL L +CK L
Sbjct: 629  LKSIDLSHSTRLTETPNF-SGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKML 687

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              L  SI  L SL+TL +SGCCKL+  P+ LGK+E L+EL    TA+    SS+  +KNL
Sbjct: 688  KSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNL 747

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
             +  F G   P  +       P ++L   S  +  +LP ++G+ SL KL+LSD  + + A
Sbjct: 748  ETFSFQGRKGPSPA-------PSSMLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGA 800

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
              SD+  L SLK L LN NNF TLP  IS L  L  LE ++C+RLQ+LP++P ++ ++ A
Sbjct: 801  RLSDLGLLSSLKILILNGNNFDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGA 860

Query: 293  NGCSSL-----VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
            + C+SL      +LF +L + +              L+++    S L    E Q  +   
Sbjct: 861  HNCTSLEAVSNQSLFSSLMIAK--------------LKEHPRRTSQLEHDSEGQLSA--- 903

Query: 348  HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
               ++V PGS IP W  YQ+ G  +TV  P   +     + FA C V      ++ + L 
Sbjct: 904  -AFTVVAPGSGIPDWISYQSSGREVTVKLPPNWF-TTYFLAFASCVV------TSPSVLP 955

Query: 408  HSYPAHEL--ECSM-----DGSGEGHYIYFRGKF-GHVVSDHLWLLFLPRHGHNWQFESN 459
            ++   +EL  +C++           + ++ R    G + SDH+WL ++         E  
Sbjct: 956  YADSINELCTKCTVFYSTSSCVSSSYDVFPRSHAEGRMESDHVWLRYVRFPISINCHEVT 1015

Query: 460  LIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDE--TTKQSTRFTSCNLNEVHHDFVGSN 517
             I+ SF  I   +  +KRCG   +Y ++ E ++     + ++ F+  NL E+H       
Sbjct: 1016 HIKFSFEMILGTSSAIKRCGVGLVYGNDDENYNNPGMIQFNSIFSPPNL-EIHD------ 1068

Query: 518  MEVAQASGSGSS 529
                + SGSG S
Sbjct: 1069 ---GEPSGSGCS 1077



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G  S+ ++ +SI +L  L+LL L+ CK L SL  +I  L  L+TL +
Sbjct: 646 FSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVV 705

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGC KLKKFP+ +  +E L +LY D T++ EVPSS+  L  LE       K     PSS+
Sbjct: 706 SGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRKGPSPAPSSM 765



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 2/111 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLS 752
           +++L +    ++ L +++LS  ++  E P  +   + L ++ L+G  ++R L  SI +L+
Sbjct: 616 VQQLWKGSKGMEKLKSIDLSHSTRLTETPNFSGVVN-LEQLILQGCISLRKLHTSIGVLN 674

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              L NL+DCK LKSL  +I  L SL+ +  SGC KLK   E LGK+E L+
Sbjct: 675 KLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLK 725



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L     +R+L  +I +L  L  L L  CK L+ L  +I  L  L TL +SG  K ++FP
Sbjct: 656 ILQGCISLRKLHTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFP 715

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           E     + L E++ + TA+  +P+S+  L      + +  K     PS++   RS  M +
Sbjct: 716 ENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRKGPSPAPSSMLRTRSDSMGF 775


>gi|255579570|ref|XP_002530627.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223529837|gb|EEF31770.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1116

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 210/491 (42%), Gaps = 101/491 (20%)

Query: 78   LSKLYLDGTSIAEVPSSIELLPGLELLYLN-ECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L  L  D       PS+ +  P  EL+ L+  C N+  +   I  LK LK ++LS    L
Sbjct: 577  LRYLEWDRYPFKSFPSTFQ--PN-ELIELHMRCSNIKHMWKGIKPLKMLKVIDLSYSVNL 633

Query: 137  ENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
                D    V +LEEL++ G T +     SI +++     +     + P++  W   LP+
Sbjct: 634  IKTMD-FKDVPNLEELNLEGCTRLLEVHQSIGVLRE----WEIAPRQLPSTKLWDFLLPW 688

Query: 196  N------LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                   L  K+  P+A+ LP+L  + SL  L+LS C L + A+PSD+     LK   L+
Sbjct: 689  QKFPQRFLTQKNPNPMAMALPALFSLKSLRSLNLSYCNLTDGALPSDLSCFPLLKTFNLS 748

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-------- 301
             NNFV++P+SIS L  LE+ +  +CKRLQS P +P ++ F+   GCS+L TL        
Sbjct: 749  GNNFVSIPSSISRLSKLEDFQFSNCKRLQSFPNLPSSILFLSMEGCSALETLLPKSNSSQ 808

Query: 302  FGALKLCR-----------------------------------------SKYTIINCIDS 320
            F    +C                                          S  T IN + S
Sbjct: 809  FELFNICAEGCKRLQLLPDLSSSILKISVEGFSSKETSPNLFVTHSSKPSMLTFINILKS 868

Query: 321  LKLLRKNGLAISMLREYLEL--------QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSI 372
            +++  +N   ++ +  YL              +P  ++S+   GS+IP WF YQ+ GSS+
Sbjct: 869  VEVQSENIPLVARMSGYLHYLLRHRHSSLGFFNPSTQVSVCLAGSEIPGWFNYQSPGSSL 928

Query: 373  TVTRPSYLYNVNKVVGFAICCVFQV--PKHSTGTYLFHSYPAHELECSMDGSGEGHYIYF 430
             +  P Y +  NK +GF  C VF+   P   T T            C +          F
Sbjct: 929  EMQLPPYWW-TNKWMGFTFCIVFEFREPIADTSTIF----------CDLHARIAPDQDLF 977

Query: 431  RGKFGHVVS-------DHLWLLFLPRHG----HNWQFESNLIRLSFRSISDPTWKVKRCG 479
             G+    +S       D LW+ ++PR        W+ ES+ ++++F S        K CG
Sbjct: 978  LGRSSVQISKELDTTLDQLWVNYIPRSCLTCLDKWE-ESDCLKMTFFS---NELSFKYCG 1033

Query: 480  FHPIYMHEVEE 490
               +Y  + +E
Sbjct: 1034 IRKMYSRDADE 1044



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 28/190 (14%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL-------------SLAIE 678
           GR+ VR++S +EPG  SRLW     + D+  VLS+ T   ++              L+ +
Sbjct: 493 GREIVRQESQEEPGKRSRLW----LYEDVYHVLSNDTGTEQVEAIVLDSCEQEDEELSAK 548

Query: 679 LLFGLVQLTLNGCKNL---ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
               + +L     +NL   E L    + L+YL          F+ FP  T   ++L+E+H
Sbjct: 549 AFTKMKRLRFLKLRNLHLSEGLEYLSNKLRYLEW----DRYPFKSFPS-TFQPNELIELH 603

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNL-KSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +  + I+ +   I+ L    + +L    NL K++      + +L  +   GC++L  V +
Sbjct: 604 MRCSNIKHMWKGIKPLKMLKVIDLSYSVNLIKTM--DFKDVPNLEELNLEGCTRLLEVHQ 661

Query: 795 TLGKVESLEV 804
           ++G +   E+
Sbjct: 662 SIGVLREWEI 671


>gi|104647007|gb|ABF74127.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 207/454 (45%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           L+L  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  ++E    L +  TSI  +P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTNIE---VLRISETSIEAIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTTIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S TAIRR   SI  +  L+ L                    N    S
Sbjct: 320 NIGNLVALEVLQASRTAIRRAPWSIARLTRLQVLAIG-----------------NSFYTS 362

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
              +  + P L+    L  L LS+  +          NL +L EL L+ NNF  +PASI 
Sbjct: 363 EGLLHSLCPPLSRFDDLRALSLSN--MXXXXXXXXXGNLWNLLELDLSGNNFEFIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP ++P  L ++  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPDELPRGLLYIYIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
             KL +   +   ++   ++L++ + P H     FPGS IP  F +Q  G S+ +  P  
Sbjct: 480 --KLDQATQI---LIHRNMKLES-AKPEHS---YFPGSDIPTCFNHQVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  +S   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNSLKIH 559



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 131/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L ++P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +L+L  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLFLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                                    L  
Sbjct: 198 LENLPDTLQNLTSLETLEVSGC-----------------------------------LNV 222

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
           N   + S  + ++  S T +                AIP+ I NL  L+ L ++ N    
Sbjct: 223 NEFPRVSTNIEVLRISETSI---------------EAIPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L    L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKNIPIGIT-LKSLETVGMSGCSSLKHFPEISYNTRRLF---L 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           ++++ + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTNIEVL---RISETSIEAIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+N+P  +  ++SLE + +SG +  +    I    N R L+ S    
Sbjct: 94  KGLSCFYLTNCIQLKNIPIGI-TLKSLETVGMSGCSSLKHFPEI--SYNTRRLFLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  N++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTNIEVLR 236


>gi|113205407|gb|ABI34381.1| Leucine Rich Repeat family protein [Solanum demissum]
          Length = 487

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 170/376 (45%), Gaps = 74/376 (19%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + EV  S+     L  L L  C NL   P    ++K L +++L  C+ L++FP+   +M+
Sbjct: 58  LEEVHYSLAYCEKLIELNLNWCTNLGRFPWV--NMKSLESMDLQYCNSLREFPEFAGAMK 115

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
               +    + I E+PSSI+ L  L  L L+  KNL  LPSSI  LK L TLN+S C K+
Sbjct: 116 SELVILSANSGIRELPSSIQYLTHLTELDLSGMKNLEALPSSIVKLKGLVTLNVSYCSKI 175

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
           +++P+ +G +E+LE LD + T I RP SS+  +  L+SL F                   
Sbjct: 176 KSLPEEIGDLENLEGLDATFTLISRPPSSVVRLNKLKSLKF------------------- 216

Query: 197 LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
                                     LS     +  IP DI  L SLK L L  +NF  L
Sbjct: 217 --------------------------LSSSNFIDGRIPEDIGYLSSLKGLLLQGDNFEHL 250

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIIN 316
           P SI+ L  L  L L +CKRL  LP+ PP L  + A+  + L+        C S +  I+
Sbjct: 251 PQSIAQLGALRVLYLVNCKRLTQLPEFPPQLDTICADWHNDLI--------CNSLFQNIS 302

Query: 317 CIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTR 376
                    ++ ++ S   + L L+  +           GS IP WF +Q    S++V  
Sbjct: 303 SF-------QHDISAS---DSLSLRVFTS---------SGSNIPSWFHHQGMDKSVSVNL 343

Query: 377 PSYLYNVNKVVGFAIC 392
               Y  +  +GFA+C
Sbjct: 344 HENWYVSDNFLGFAVC 359



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 78/140 (55%), Gaps = 3/140 (2%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           + I E+PSSI+ LT L  L L G KNL +LP +I  LK L TL +S CSK+K  P+ +  
Sbjct: 125 SGIRELPSSIQYLTHLTELDLSGMKNLEALPSSIVKLKGLVTLNVSYCSKIKSLPEEIGD 184

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV--RLPSSINGLKSLKTLNLSG 132
           +E+L  L    T I+  PSS+  L  L+ L      N +  R+P  I  L SLK L L G
Sbjct: 185 LENLEGLDATFTLISRPPSSVVRLNKLKSLKFLSSSNFIDGRIPEDIGYLSSLKGLLLQG 244

Query: 133 CCKLENVPDTLGKVESLEEL 152
               E++P ++ ++ +L  L
Sbjct: 245 -DNFEHLPQSIAQLGALRVL 263



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 2/134 (1%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           + E+  ++     L++L LN C NL R P     +K L +++L   +  REFPE   +  
Sbjct: 58  LEEVHYSLAYCEKLIELNLNWCTNLGRFPWV--NMKSLESMDLQYCNSLREFPEFAGAMK 115

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             L I    + IR LP+SI+ L+     +L   KNL++LPS+I  L+ L  +  S CSK+
Sbjct: 116 SELVILSANSGIRELPSSIQYLTHLTELDLSGMKNLEALPSSIVKLKGLVTLNVSYCSKI 175

Query: 790 KNVTETLGKVESLE 803
           K++ E +G +E+LE
Sbjct: 176 KSLPEEIGDLENLE 189



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 32/171 (18%)

Query: 656 EFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           EFP+        + +LS  + IREL  +I+ L  L +L L+G KNLE LP +I  LK L 
Sbjct: 106 EFPEFAGAMKSELVILSANSGIRELPSSIQYLTHLTELDLSGMKNLEALPSSIVKLKGLV 165

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI---------------ELLSG 753
           TLN+S  SK +  PE     + L  +    T I   P+S+                 + G
Sbjct: 166 TLNVSYCSKIKSLPEEIGDLENLEGLDATFTLISRPPSSVVRLNKLKSLKFLSSSNFIDG 225

Query: 754 NI------LSNLK----DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            I      LS+LK       N + LP +I  L +LR++Y   C +L  + E
Sbjct: 226 RIPEDIGYLSSLKGLLLQGDNFEHLPQSIAQLGALRVLYLVNCKRLTQLPE 276


>gi|356514859|ref|XP_003526120.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1146

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 227/495 (45%), Gaps = 57/495 (11%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            LE L L+GC  L  + ++I   + L  L+L  C  L   P+    +  L  L L+G   +
Sbjct: 656  LETLNLQGCIQLKEIGLSIVLSRRLSYLDLKDCKCLINLPRFGEDLI-LQILVLEGCQKL 714

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP--DTLGKV 146
              + SSI LL  L  L L  CKNLV LP+SI GL SL+ LNLSGC KL N+     L   
Sbjct: 715  RHIDSSIGLLKKLRRLDLKNCKNLVSLPNSILGLNSLECLNLSGCSKLYNIQLLYELRDA 774

Query: 147  ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
            E L+++D+ G  I   ++S +  ++ +S+   GC                          
Sbjct: 775  EHLKKIDIDGAPIHFQSTSSYSRQHKKSV---GC-------------------------- 805

Query: 207  LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
             ++PS      + +LDLS C L    IP  I  +  L++L L+ NNFVTLP ++  L  L
Sbjct: 806  -LMPSSPIFPCMCELDLSFCNL--VQIPDAIGIICCLEKLDLSGNNFVTLP-NLKKLSKL 861

Query: 267  EELELEDCKRLQSLPQIPPNLQF-VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
              L+L+ CK+L+SLP++P  +     A  C  L+ +    K  +    I NC + +   R
Sbjct: 862  FSLKLQHCKKLKSLPELPSRIDLPTDAFDCFRLM-IPSYFKNEKIGLYIFNCPELVDRDR 920

Query: 326  KNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNK 385
               +A+S +    ++Q       ++  V  GS+IP+WF  Q+EG+ +++     +++ N 
Sbjct: 921  CTDMALSWMILISQVQFKLPFNRRIQSVTTGSEIPRWFNNQHEGNCVSLDASPVMHDHN- 979

Query: 386  VVGFAICCVFQVPKHSTGTYLFHSY---PAHEL-ECSMDGSGEGHYIYFRGKFGHVVSDH 441
             +G A C +F VP  +     F      P H   +  +D  G+        K     SDH
Sbjct: 980  WIGVAFCLMFVVPHETLSAMGFSDSDCPPWHFFGDIPVDFYGDLDLELVLDK-----SDH 1034

Query: 442  LWLLFLPRHGHNWQFE---SNLIRLSFRSISDPTW-----KVKRCGFHPIYMHEVEEFDE 493
            +WL F+ R   + QF      L RL  +      W     +VK+ G+  +Y  + EE   
Sbjct: 1035 MWLFFVSRTQFSRQFPLKLKYLGRLVLKCDKRMGWSESYAEVKKYGYRWVYKEDKEEPSN 1094

Query: 494  TTKQSTRFTSCNLNE 508
               +  +F     NE
Sbjct: 1095 PLARKRKFGEIEENE 1109



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI-HLEG-TA 740
           L  L L GC  L+ +  +I   + LS L+L         P      D +L+I  LEG   
Sbjct: 656 LETLNLQGCIQLKEIGLSIVLSRRLSYLDLKDCKCLINLPRF--GEDLILQILVLEGCQK 713

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           +R + +SI LL      +LK+CKNL SLP++I GL SL  +  SGCSKL N+
Sbjct: 714 LRHIDSSIGLLKKLRRLDLKNCKNLVSLPNSILGLNSLECLNLSGCSKLYNI 765



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 78/157 (49%), Gaps = 18/157 (11%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L+G   +  + SSI LL  L  L LK CKNL SLP +I  L  L  L LSGCSKL
Sbjct: 703 LQILVLEGCQKLRHIDSSIGLLKKLRRLDLKNCKNLVSLPNSILGLNSLECLNLSGCSKL 762

Query: 66  KKFPQIVASMED---LSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--LPSSIN 120
               Q++  + D   L K+ +DG  I    +S          Y  + K  V   +PSS  
Sbjct: 763 YNI-QLLYELRDAEHLKKIDIDGAPIHFQSTSS---------YSRQHKKSVGCLMPSS-P 811

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
               +  L+LS  C L  +PD +G +  LE+LD+SG 
Sbjct: 812 IFPCMCELDLS-FCNLVQIPDAIGIICCLEKLDLSGN 847


>gi|15234324|ref|NP_195338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661225|gb|AEE86625.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1179

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 217/459 (47%), Gaps = 88/459 (19%)

Query: 7    LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            L  L L+G TS+ E+P  ++ +  L  L ++GC +L  LP    +L  L+TL L+ CS +
Sbjct: 677  LQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCTSLRVLPRM--NLISLKTLILTNCSSI 734

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            +KF Q+++  ++L  L+LDGT+I ++P+ +  L  L +L L +CK L  +P  +  LK+L
Sbjct: 735  QKF-QVIS--DNLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKAL 791

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
            + L LSGC KL+     +  ++ L+ L + GTA++                         
Sbjct: 792  QELVLSGCSKLKTFSVPIETMKCLQILLLDGTALKE------------------------ 827

Query: 186  SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
                                   +P L    S    DL +   G       I+ L SL+ 
Sbjct: 828  -----------------------MPKLLRFNSSRVEDLPELRRG-------INGLSSLRR 857

Query: 246  LYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
            L L+RNN ++ L   I+ L +L+ L+L+ CK L S+P +PPNL+ + A+GC  L T+   
Sbjct: 858  LCLSRNNMISNLQIDINQLYHLKWLDLKYCKNLTSIPLLPPNLEILDAHGCEKLKTVASP 917

Query: 305  LKLCR------SKYTIINCIDSLKLLRKNGL-AISMLREYLELQAVSDPG---HKLSIV- 353
            + L +      SK+   NC ++L+ + KN + + +  +  L+ +     G     L I  
Sbjct: 918  MALLKLMEQVQSKFIFTNC-NNLEQVAKNSITSYAQRKSQLDARRCYKEGGVSEALFIAC 976

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
            FPGS +P WF YQ  GS++ +  P +  + N++   A+C V   P        F      
Sbjct: 977  FPGSDVPSWFNYQTFGSALRLKLPPHWCD-NRLSTIALCAVVTFPDTQDEINRF------ 1029

Query: 414  ELECSMDGSGE-GHYIYFRGKFG-------HVVSDHLWL 444
             +EC+ +   E G  I F    G        + SDH+++
Sbjct: 1030 SIECTCEFKNELGTCIRFSCTLGGSWIESRKIDSDHVFI 1068



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 13/185 (7%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  L+LDGT+I ++P+ +  L  L +L LK CK L ++P  +  LK L+ L LSGCSKL
Sbjct: 743 NLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKL 802

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--NLVRLPSSINGLK 123
           K F   + +M+ L  L LDGT++ E+P         +LL  N  +  +L  L   INGL 
Sbjct: 803 KTFSVPIETMKCLQILLLDGTALKEMP---------KLLRFNSSRVEDLPELRRGINGLS 853

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           SL+ L LS    + N+   + ++  L+ LD+     +  TS   L  NL  L   GC + 
Sbjct: 854 SLRRLCLSRNNMISNLQIDINQLYHLKWLDLK--YCKNLTSIPLLPPNLEILDAHGCEKL 911

Query: 184 PASAS 188
              AS
Sbjct: 912 KTVAS 916



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 19/143 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT------------SS--- 727
           L +L L GC +LE LPR +  +K L  LN+ G +  R  P +             SS   
Sbjct: 677 LQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCTSLRVLPRMNLISLKTLILTNCSSIQK 736

Query: 728 ----RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                D L  +HL+GTAI  LP  +  L   I+ NLKDCK L ++P  +  L++L+ +  
Sbjct: 737 FQVISDNLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVL 796

Query: 784 SGCSKLKNVTETLGKVESLEVRL 806
           SGCSKLK  +  +  ++ L++ L
Sbjct: 797 SGCSKLKTFSVPIETMKCLQILL 819



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT I +L   +  L  L+ L L  CK L  +P  +  LK L  L LSG SK + F    
Sbjct: 750 DGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPEFLGKLKALQELVLSGCSKLKTFSVPI 809

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
            +   L  + L+GTA++ +P  +   S  +       ++L  L   INGL SLR +
Sbjct: 810 ETMKCLQILLLDGTALKEMPKLLRFNSSRV-------EDLPELRRGINGLSSLRRL 858


>gi|359493392|ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 162/595 (27%), Positives = 261/595 (43%), Gaps = 119/595 (20%)

Query: 1    MASMKDLSDLYLDGT---SITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRT 56
            + S+K L   YLD +   +I  +P++I   + L  L+L GC  L   P + I S   L T
Sbjct: 716  IGSLKALE--YLDLSYCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHT 773

Query: 57   LELSGCSKLKKFPQI-VASMEDLSKL-YLDGTSIAEVPSSIEL----------------- 97
            L L GCSKLK FP I + S++ L  L +    ++  +P++I                   
Sbjct: 774  LSLMGCSKLKGFPDINIGSLKALQLLDFSRCRNLESLPNNIGSLSSLHTLLLVGCSKLKG 833

Query: 98   --------LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV---------- 139
                    L  L+LL  + C+NL  LP SI  L SLKTL ++ C KLE +          
Sbjct: 834  FPDINFGSLKALQLLDFSRCRNLESLPMSIYNLSSLKTLRITNCPKLEEMLEIELGVDWP 893

Query: 140  -PDTLGKVESLEELDVSG-----TAIRR--PTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             P T   + +   +   G      A+++  P SS+  + ++R  Y  G  +   S S+HL
Sbjct: 894  LPPTTSHISNSAIIWYDGCFSSLEALKQKCPLSSLVEL-SVRKFY--GMEKDILSGSFHL 950

Query: 192  H-LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH--------- 241
              L    LG        +L  +  + SL KL L+ C   E  IPSDI NL          
Sbjct: 951  SSLKILSLGNFPSMAGGILDKIFHLSSLVKLSLTKCKPTEEGIPSDIRNLSPLQQLSLHD 1010

Query: 242  ----------------SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
                            SL+EL+L  N+F ++PA IS L NL+ L+L  CK LQ +P++P 
Sbjct: 1011 CNLMEGKILNHICHLTSLEELHLGWNHFSSIPAGISRLSNLKALDLSHCKNLQQIPELPS 1070

Query: 286  NLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD 345
            +L+F+ A+ CS  ++   +L      ++++NC  S     ++ + I     +        
Sbjct: 1071 SLRFLDAH-CSDRISSSPSL---LPIHSMVNCFKSEI---EDCVVIHRYSSFW------- 1116

Query: 346  PGHKLSIVFP-GSQIPKWFMYQNEGS-SITVTRPSYLYNVNKVVGFAICCVFQVP----- 398
             G+ + IV P  S I +W  Y+N G   +T+  P   Y  + + GFA+CCV+  P     
Sbjct: 1117 -GNGIGIVIPRSSGILEWITYRNMGGHKVTIELPPNWYENDDLWGFALCCVYVAPACESE 1175

Query: 399  ---KHSTG------TYLFHSYPAHELECSMDGSGE-----GHYIYFRGKFGHVVSDHLWL 444
               ++ +G      + L     +   E +++G+ +     G  + FR      VSD  W+
Sbjct: 1176 DESQYESGLISEDDSDLEDEEASFYCELTIEGNNQSEDVAGFVLDFRC-VKDDVSDMQWV 1234

Query: 445  LFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQST 499
            +  P+      + +N  + +    S    +V  CG   +Y  + E+   T  Q +
Sbjct: 1235 ICYPKLAIEKSYHTN--QWTHFKASFGGAQVAECGIRLVYTKDYEQKHPTMAQGS 1287



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 122/261 (46%), Gaps = 48/261 (18%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           L GLE L L  CKNL SLP +I SL  L+TL L  CSKL  FP I               
Sbjct: 670 LNGLEKLDLGYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFPGI--------------- 714

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD-TLGK 145
                  +I  L  LE L L+ C+N+  LP++I    SL TL+L GC KL+  PD  +G 
Sbjct: 715 -------NIGSLKALEYLDLSYCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGS 767

Query: 146 VESLEELDVSGTAIRR--PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSC 203
             SL  L + G +  +  P  +I  +K L+ L FS C    +       LP N+   SS 
Sbjct: 768 FSSLHTLSLMGCSKLKGFPDINIGSLKALQLLDFSRCRNLES-------LPNNIGSLSSL 820

Query: 204 PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISG 262
              L++      CS  K    D   G         +L +L+ L  +R  N  +LP SI  
Sbjct: 821 HTLLLVG-----CSKLK-GFPDINFG---------SLKALQLLDFSRCRNLESLPMSIYN 865

Query: 263 LLNLEELELEDCKRLQSLPQI 283
           L +L+ L + +C +L+ + +I
Sbjct: 866 LSSLKTLRITNCPKLEEMLEI 886



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 4/129 (3%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT-SSRDQLLEIHLEG 738
           L  L  L L+ C+N+E LP  I +   L TL+L G SK + FP+I   S   L  + L G
Sbjct: 719 LKALEYLDLSYCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMG 778

Query: 739 -TAIRGLP-ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE-T 795
            + ++G P  +I  L    L +   C+NL+SLP+ I  L SL  +   GCSKLK   +  
Sbjct: 779 CSKLKGFPDINIGSLKALQLLDFSRCRNLESLPNNIGSLSSLHTLLLVGCSKLKGFPDIN 838

Query: 796 LGKVESLEV 804
            G +++L++
Sbjct: 839 FGSLKALQL 847



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 23/124 (18%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L GL +L L  CKNL  LP +I +L  L TLNL   SK   FP               G 
Sbjct: 670 LNGLEKLDLGYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFP---------------GI 714

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE-TLGK 798
            I  L A +E L      +L  C+N++SLP+ I    SL  +   GCSKLK   +  +G 
Sbjct: 715 NIGSLKA-LEYL------DLSYCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGS 767

Query: 799 VESL 802
             SL
Sbjct: 768 FSSL 771


>gi|298205191|emb|CBI17250.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 161/308 (52%), Gaps = 47/308 (15%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M+ L+ L+ D ++I E+PS+I+ L                          L  L L  CS
Sbjct: 1   MEALTYLHFDRSAIKELPSAIKYL--------------------------LEDLLLFVCS 34

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
               FP+I   MED+ +     T I E+PSS+E L  +  L+L++ KNL  L SSI   K
Sbjct: 35  NPDAFPEI---MEDMKEFLDSRTGIKELPSSMEHLLNINSLFLSDFKNLRSLLSSIRRFK 91

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           S + L L+GC  L N P+ +  ++ LE L + GTAI+   SSI  +K+L+ LY S C   
Sbjct: 92  SFRRLFLNGCSSLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKN- 150

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLP----------SLTGVCSLTKLDLSDCGLGEAAI 233
                  + +P + +    C   L+LP          +L G+C+L +LDLS C L E +I
Sbjct: 151 ------LVTIP-DSINDLRCLKRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSI 203

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
           P+DI  L+SL  L L+ N+ V++P+ I+ L  L  L++  CK LQ +P++  +L  + A+
Sbjct: 204 PTDIWGLYSLCTLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAH 263

Query: 294 GCSSLVTL 301
           GC+ L  L
Sbjct: 264 GCTKLEML 271



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 6/158 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  MK L  L L+GT+I E+PSSI+ L  L++L L  CKNL ++P +I+ L+CL+ L L 
Sbjct: 111 MEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCLKRLILP 170

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPSS 118
           GCS L+KFP+ +  +  L +L L   ++ E  +P+ I  L  L  L L+   ++V +PS 
Sbjct: 171 GCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLCTLNLSG-NHMVSIPSG 229

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
           I  L  L+ L++S C  L+ +P+      SL ++D  G
Sbjct: 230 ITQLCRLRLLDISHCKMLQEIPEL---SSSLPQIDAHG 264



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 655 DEFPDIVQ----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           D FP+I++     L   T I+EL  ++E L  +  L L+  KNL  L  +I   K    L
Sbjct: 37  DAFPEIMEDMKEFLDSRTGIKELPSSMEHLLNINSLFLSDFKNLRSLLSSIRRFKSFRRL 96

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
            L+G S  R FPEI      L  + LEGTAI+ LP+SI+ L    +  L +CKNL ++P 
Sbjct: 97  FLNGCSSLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPD 156

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETL-GKVESLEVRLSSWN 810
           +IN LR L+ +   GCS L+   + L G    +E+ LS  N
Sbjct: 157 SINDLRCLKRLILPGCSNLEKFPKNLEGLCTLVELDLSHCN 197



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 26/155 (16%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +        +GT I+EL  +I+ L  L  L L+ CKNL  +P +I+ L+ L  
Sbjct: 107 FPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCLKR 166

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHL------EG---TAIRGLPASIEL-LSGNILSNL 759
           L L G S   +FP+       L+E+ L      EG   T I GL +   L LSGN     
Sbjct: 167 LILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLCTLNLSGN----- 221

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
               ++ S+PS I  L  LR++  S C  L+ + E
Sbjct: 222 ----HMVSIPSGITQLCRLRLLDISHCKMLQEIPE 252


>gi|297791257|ref|XP_002863513.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309348|gb|EFH39772.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1327

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 202/408 (49%), Gaps = 74/408 (18%)

Query: 5    KDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            ++L  + L+G T +  V   ++ +  L  L L+GC +L SLP     L  L+TL LSGCS
Sbjct: 687  RNLQSMNLEGCTKLEAVHHELKNMGSLLFLNLRGCTSLESLPKI--KLNSLKTLILSGCS 744

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
             + +F  I    E L +LYLDGT+I  +PS I  L  L LL L +CK L+ LP +I  LK
Sbjct: 745  NVDEFNLI---SEKLEELYLDGTAIKGLPSDIGNLQRLVLLKLKDCKKLLSLPDTIRNLK 801

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            +L+ L LSGC  L + P+    ++ L+ L + GTAI+     +  + ++    FS     
Sbjct: 802  ALEKLILSGCSSLVSFPEVKQNLKHLKTLLLDGTAIKDVHDVVHRL-SINQGQFS----- 855

Query: 184  PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                                             S T  DL +   G       I+ L S+
Sbjct: 856  ---------------------------------SFTHYDLCEWRHG-------INGLSSV 875

Query: 244  KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC-------S 296
            + L L+RN+F +LP SI  L NL+ L+L+ CK+L SLP +PPNL ++ A+GC       +
Sbjct: 876  QRLCLSRNDFTSLPESIMYLYNLKWLDLKYCKQLTSLPMLPPNLHWLDADGCISLKNIEN 935

Query: 297  SLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP-GHK------ 349
            SL  L  A +   S +   NC   L  + KN + +S +R   ++Q +SD   HK      
Sbjct: 936  SLSLLLAATEQLHSTFIFSNC-KKLDQVAKNDI-VSYVRR--KIQLMSDALVHKNKGSIL 991

Query: 350  ---LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
               + I +PG Q+P WF +++ GS +    P + +N + + G A+C V
Sbjct: 992  DVLIKICYPGWQLPVWFDHRSVGSELKQNLPRH-WNEDGLTGIALCVV 1038



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 5/124 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L GC +LE LP+    L  L TL LSG S   EF  I+   ++L E++L+GTAI+
Sbjct: 713 LLFLNLRGCTSLESLPKI--KLNSLKTLILSGCSNVDEFNLIS---EKLEELYLDGTAIK 767

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           GLP+ I  L   +L  LKDCK L SLP TI  L++L  +  SGCS L +  E    ++ L
Sbjct: 768 GLPSDIGNLQRLVLLKLKDCKKLLSLPDTIRNLKALEKLILSGCSSLVSFPEVKQNLKHL 827

Query: 803 EVRL 806
           +  L
Sbjct: 828 KTLL 831


>gi|297819854|ref|XP_002877810.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323648|gb|EFH54069.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1251

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 121/337 (35%), Positives = 166/337 (49%), Gaps = 46/337 (13%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            K+L  LYL GT+I E+PS + L + L +L L+ CK L  LP+ I +L  L  L LSGCS+
Sbjct: 735  KNLRKLYLGGTAIQELPSLMHL-SELVVLDLENCKRLEKLPMGIGNLSSLAVLNLSGCSE 793

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L+    I  ++E+L   YL GT+I EVPSSI+ L  L +L L  CK L  LP  I  LKS
Sbjct: 794  LEDIQGIPRNLEEL---YLAGTAIQEVPSSIKHLSELVVLDLQNCKRLRHLPMEIGNLKS 850

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-------MKNLRSLYF 177
            L TL L+                     D SG +IR  ++SI         + NL  L F
Sbjct: 851  LVTLKLT---------------------DPSGMSIREVSTSIIQNGISEINISNLNYLLF 889

Query: 178  SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
            +  NE       HL  P       S  +  ++P    + SL+  + S        IP +I
Sbjct: 890  T-VNENADQRREHLPQP----RLPSSSLHGLVPRFYALVSLSLFNAS-----LMHIPEEI 939

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             +L S+  L L RN F  +P SI  L  L  L L  C+ L SLP +P +L+ +  +GC S
Sbjct: 940  CSLPSVVLLDLGRNGFSKIPESIKQLSKLHSLRLRHCRNLISLPVLPQSLKLLNVHGCVS 999

Query: 298  LVTLFGALKLCRSKYTIINCID-SLKLLRK---NGLA 330
            L ++    +   S YT  +C + S K+ RK    GLA
Sbjct: 1000 LESVSWGFEQFPSHYTFSDCFNRSPKVARKRVVKGLA 1036



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 8/147 (5%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I+EL  ++  L  LV L L  CK LE+LP  I  L  L+ LNLSG S   E  +I  
Sbjct: 744 GTAIQELP-SLMHLSELVVLDLENCKRLEKLPMGIGNLSSLAVLNLSGCS---ELEDIQG 799

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRS---LRMMYP 783
               L E++L GTAI+ +P+SI+ LS  ++ +L++CK L+ LP  I  L+S   L++  P
Sbjct: 800 IPRNLEELYLAGTAIQEVPSSIKHLSELVVLDLQNCKRLRHLPMEIGNLKSLVTLKLTDP 859

Query: 784 SGCSKLKNVTETLGKVESLEVRLSSWN 810
           SG S ++ V+ ++ +    E+ +S+ N
Sbjct: 860 SGMS-IREVSTSIIQNGISEINISNLN 885



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 126/282 (44%), Gaps = 54/282 (19%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           +E++ L+GC  L    +     + LR + LSGC K+K FP++  ++E+   LYL  T + 
Sbjct: 617 IEVIDLQGCARLQRF-IATGHFQHLRVINLSGCIKIKSFPEVPPNIEE---LYLKQTGLR 672

Query: 90  EVPSSIELLPGLELLYLNE-CKNLVRLPSS-------INGLKSLKTLNLSGCCKLENVPD 141
            +P+ I        +Y ++  K L R  SS       +  LK LK L+LS C  LE    
Sbjct: 673 SIPTVIFSPQDNSFIYDHQDHKFLNREVSSESQSLSIMVYLKYLKVLDLSHCLGLE---- 728

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
                      D+ G           + KNLR LY  G       +  HL     +L   
Sbjct: 729 -----------DIHG-----------IPKNLRKLYLGGTAIQELPSLMHLS-ELVVLDLE 765

Query: 202 SCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNL-HSLKELYLNRNNFVTLPAS 259
           +C     LP   G + SL  L+LS C   E     DI  +  +L+ELYL       +P+S
Sbjct: 766 NCKRLEKLPMGIGNLSSLAVLNLSGCSELE-----DIQGIPRNLEELYLAGTAIQEVPSS 820

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           I  L  L  L+L++CKRL+ LP    NL+        SLVTL
Sbjct: 821 IKHLSELVVLDLQNCKRLRHLPMEIGNLK--------SLVTL 854



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 10/102 (9%)

Query: 704 LKYLSTLNLS---GLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
           LKYL  L+LS   GL      P+       L +++L GTAI+ LP S+  LS  ++ +L+
Sbjct: 713 LKYLKVLDLSHCLGLEDIHGIPK------NLRKLYLGGTAIQELP-SLMHLSELVVLDLE 765

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +CK L+ LP  I  L SL ++  SGCS+L+++      +E L
Sbjct: 766 NCKRLEKLPMGIGNLSSLAVLNLSGCSELEDIQGIPRNLEEL 807



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 16/106 (15%)

Query: 649 RLWEEADEFPDIVQVL----SDGTDIRELSLA--IELLFGLVQLTLNGCKNLERLPRTIS 702
           RLWE   E   + +++        DI+EL  A  IE++       L GC  L+R   T  
Sbjct: 583 RLWEGTKELGMLKRIMLCHSQQLVDIQELQNARNIEVI------DLQGCARLQRFIAT-G 635

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI 748
             ++L  +NLSG  K + FPE+  + +   E++L+ T +R +P  I
Sbjct: 636 HFQHLRVINLSGCIKIKSFPEVPPNIE---ELYLKQTGLRSIPTVI 678


>gi|16944812|emb|CAC82812.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1101

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 184/389 (47%), Gaps = 64/389 (16%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGCSKLKKFPQIVA 73
           +++ EV  S+     L  L L+ CKNL S   V   SL+CL    L GCS L+KFP+I  
Sbjct: 637 SNLKEVHHSLRCSKKLIKLNLRDCKNLESFSYVCWESLECLH---LQGCSNLEKFPRIRG 693

Query: 74  SMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
            ++   ++ +  + I ++PS+I +    L  L L+  KNL  L  SI  LKSL  L +S 
Sbjct: 694 KLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLKVSY 753

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
           C KL+++P+ +G +E+LE L    T I +P SSI  +  L+ L F+   +        +H
Sbjct: 754 CSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAK-QKSEVGLEDEVH 812

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
             F              P   G+CSL  L+LS C L +  +P DI +L SL+ L L  NN
Sbjct: 813 FVFP-------------PVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNN 859

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG-----CSSLVTLFGALK- 306
           F  LP S++ L +L+ L+L DCK L  LP+ P  L  + A+      C+SL     + + 
Sbjct: 860 FEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFPRQLDTIYADWNNDSICNSLFQNISSFQH 919

Query: 307 -LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS--QIPKWF 363
            +C S        DSL L                             VF      IP+WF
Sbjct: 920 DICAS--------DSLSLR----------------------------VFTNEWKNIPRWF 943

Query: 364 MYQNEGSSITVTRPSYLYNVNKVVGFAIC 392
            +Q +  S++V  P   Y  +  +GFA+C
Sbjct: 944 HHQGKDKSVSVKLPENWYVCDNFLGFAVC 972



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + ++++E+  ++     L++L L  CKNLE    +    + L  L+L G S   +FP 
Sbjct: 633 LEECSNLKEVHHSLRCSKKLIKLNLRDCKNLESF--SYVCWESLECLHLQGCSNLEKFPR 690

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMY 782
           I       +EI ++ + IR LP++I     ++   +L   KNL +L  +I  L+SL M+ 
Sbjct: 691 IRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLK 750

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
            S CSKLK++ E +G +E+LE+
Sbjct: 751 VSYCSKLKSLPEEIGDLENLEI 772


>gi|16944811|emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 184/389 (47%), Gaps = 64/389 (16%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGCSKLKKFPQIVA 73
           +++ EV  S+     L  L L+ CKNL S   V   SL+CL    L GCS L+KFP+I  
Sbjct: 662 SNLKEVHHSLRCSKKLIKLNLRDCKNLESFSYVCWESLECLH---LQGCSNLEKFPRIRG 718

Query: 74  SMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
            ++   ++ +  + I ++PS+I +    L  L L+  KNL  L  SI  LKSL  L +S 
Sbjct: 719 KLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLKVSY 778

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
           C KL+++P+ +G +E+LE L    T I +P SSI  +  L+ L F+   +        +H
Sbjct: 779 CSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAK-QKSEVGLEDEVH 837

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
             F              P   G+CSL  L+LS C L +  +P DI +L SL+ L L  NN
Sbjct: 838 FVFP-------------PVNQGLCSLKTLNLSYCNLKDEGLPQDIGSLSSLEVLNLRGNN 884

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG-----CSSLVTLFGALK- 306
           F  LP S++ L +L+ L+L DCK L  LP+ P  L  + A+      C+SL     + + 
Sbjct: 885 FEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFPRQLDTIYADWNNDSICNSLFQNISSFQH 944

Query: 307 -LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS--QIPKWF 363
            +C S        DSL L                             VF      IP+WF
Sbjct: 945 DICAS--------DSLSLR----------------------------VFTNEWKNIPRWF 968

Query: 364 MYQNEGSSITVTRPSYLYNVNKVVGFAIC 392
            +Q +  S++V  P   Y  +  +GFA+C
Sbjct: 969 HHQGKDKSVSVKLPENWYVCDNFLGFAVC 997



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + ++++E+  ++     L++L L  CKNLE    +    + L  L+L G S   +FP 
Sbjct: 658 LEECSNLKEVHHSLRCSKKLIKLNLRDCKNLESF--SYVCWESLECLHLQGCSNLEKFPR 715

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMY 782
           I       +EI ++ + IR LP++I     ++   +L   KNL +L  +I  L+SL M+ 
Sbjct: 716 IRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMKNLATLSCSIGELKSLVMLK 775

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
            S CSKLK++ E +G +E+LE+
Sbjct: 776 VSYCSKLKSLPEEIGDLENLEI 797


>gi|147865361|emb|CAN84090.1| hypothetical protein VITISV_003077 [Vitis vinifera]
          Length = 1002

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 145/265 (54%), Gaps = 17/265 (6%)

Query: 6   DLSDLYLDGTSITEVPS--SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           DL  LY  G S+  +P   S + L  L +       ++  L   I  LK L++++LS   
Sbjct: 604 DLRYLYWHGYSLKSLPKDFSPKHLVDLSM----PYSHIKKLWKGIKVLKSLKSMDLSHSK 659

Query: 64  KLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            L + P   + + +L +L L+G  ++ EV  S+  L  L  L L +CK L RLPS I   
Sbjct: 660 CLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNF 718

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           KSL+TL LSGC K E  P+  G +E L+EL   GT +R    S F M+NL+ L F GC  
Sbjct: 719 KSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKKLSFRGCG- 777

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            PASASW          +SS  +   +PS + +C L KLDLSDC + + A    +  L S
Sbjct: 778 -PASASWL------WXKRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSS 830

Query: 243 LKELYLNRNNFVTLPASISGLLNLE 267
           L++L L+ NNFVTLP ++SGL +L+
Sbjct: 831 LEDLNLSGNNFVTLP-NMSGLSHLD 854



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 170/437 (38%), Gaps = 72/437 (16%)

Query: 76  EDLSKLYLDGTSIAEVPS--SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +DL  LY  G S+  +P   S + L  L + Y     ++ +L   I  LKSLK+++LS  
Sbjct: 603 DDLRYLYWHGYSLKSLPKDFSPKHLVDLSMPY----SHIKKLWKGIKVLKSLKSMDLSHS 658

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLH 192
             L   PD  G                        + NL  L   GC N P    S    
Sbjct: 659 KCLIETPDFSG------------------------ITNLERLVLEGCINLPEVHPSLGDL 694

Query: 193 LPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
              N L    C +   LPS +    SL  L LS C   E   P +  NL  LKEL+ +  
Sbjct: 695 KKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEE-FPENFGNLEMLKELHEDGT 753

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR-S 310
               LP S   + NL++L    C      P     L   R++  S   T+  +  LC   
Sbjct: 754 VVRALPPSNFSMRNLKKLSFRGCG-----PASASWLWXKRSSN-SICFTVPSSSNLCYLK 807

Query: 311 KYTIINC-------------IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
           K  + +C             + SL+ L  +G     L     +  +S     ++ V PGS
Sbjct: 808 KLDLSDCNISDGANLGSLGFLSSLEDLNLSGNNFVTLP---NMSGLSHLDSDVAFVIPGS 864

Query: 358 QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF--QVP-KHSTGTYLFHSYP--- 411
           +IP W  YQ+  + I    P  L      +GFA+  VF  Q P  H     +F  +    
Sbjct: 865 RIPDWIRYQSSENVIEADLP--LNWSTNCLGFALALVFSSQPPVSHWLWAEVFLDFGTCC 922

Query: 412 -AHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISD 470
            + E +C     G+   +       H V DH+ L ++P        +   I+ +F   S+
Sbjct: 923 CSIETQCFFHLEGDNCVL------AHEV-DHVLLXYVPVQPSLSPHQVIHIKATFAITSE 975

Query: 471 PTWKVKRCGFHPIYMHE 487
             +++KRCG   +Y++E
Sbjct: 976 TGYEIKRCGLGLVYVNE 992



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 38/62 (61%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+L  CK L RLP  I   K L TL LSG SKF EFPE   + + L E+H +GT +R LP
Sbjct: 700 LSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALP 759

Query: 746 AS 747
            S
Sbjct: 760 PS 761



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 4/113 (3%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG--TAIRGLPASIEL 750
           ++++L + I  LK L +++LS      E P+  S    L  + LEG        P+  +L
Sbjct: 636 HIKKLWKGIKVLKSLKSMDLSHSKCLIETPDF-SGITNLERLVLEGCINLPEVHPSLGDL 694

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              N LS LKDCK L+ LPS I   +SLR +  SGCSK +   E  G +E L+
Sbjct: 695 KKLNFLS-LKDCKMLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLK 746



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 32/204 (15%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLT- 687
           ++ G + VR++ P+EPG  SRLWE+ D F D+++       I  + L +  L  ++  T 
Sbjct: 496 QQMGWEIVRQECPKEPGRRSRLWEQEDIF-DVLKRNMGSEKIEGIFLDLSHLEDILDFTT 554

Query: 688 --LNGCKNLERLPRTISALKYLS------TLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
               G K L RL +  ++   L       T N     + R   E     D L  ++  G 
Sbjct: 555 EAFAGMKKL-RLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGY 613

Query: 740 AIRGLP--------ASIELLSGNILSNLKDCKNLKSLPST-------------INGLRSL 778
           +++ LP          + +   +I    K  K LKSL S               +G+ +L
Sbjct: 614 SLKSLPKDFSPKHLVDLSMPYSHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNL 673

Query: 779 RMMYPSGCSKLKNVTETLGKVESL 802
             +   GC  L  V  +LG ++ L
Sbjct: 674 ERLVLEGCINLPEVHPSLGDLKKL 697


>gi|224085409|ref|XP_002307567.1| predicted protein [Populus trichocarpa]
 gi|222857016|gb|EEE94563.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 215/497 (43%), Gaps = 96/497 (19%)

Query: 48  ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYL 106
           I SLK L+ L LS   +L K P     +  L KL L D  S+ EV  SI +L  L LL  
Sbjct: 64  IKSLKKLKFLNLSHSHELTKTPNF-EGLPCLEKLILKDCVSLVEVHDSIGILGRLLLLNF 122

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
             CK+L  LP SI  L SLK LN+SGC KLE +P+ LG ++SL  L   GTAI     +I
Sbjct: 123 KNCKSLKTLPGSICALSSLKKLNVSGCLKLEGLPEDLGSLKSLVVLLADGTAISTIPETI 182

Query: 167 FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVAL-MLPSLTGVCSLTKLDLSD 225
             ++ L+ L F  C           HL F+       P  + + P+     SL +LDL  
Sbjct: 183 GNLEKLKILSFHDC-----------HLIFS---PRKFPQTMNIFPA-----SLQELDLRH 223

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
           C L ++ IP D   L  L+ L L  NNF +LPASI  L  L +L L +CKRL+ +P++  
Sbjct: 224 CNLSDSMIPHDFRGLFLLQTLKLCGNNFTSLPASIGNLPKLTKLLLNNCKRLEYIPELQS 283

Query: 286 NLQFVRANGCSSLVTL------FGALKL--CRSKYTIINCIDSL------------KLLR 325
           +L+   AN C  L  +       G LKL  CR+    + C+               K+L 
Sbjct: 284 SLETFHANDCPRLQFINMKFWRGGELKLNGCRN----LKCLQGFFNLEPLGVDVVEKILG 339

Query: 326 KNGLAISMLREYLELQ--------AVSDPGHKL------SIVFPGSQIPKWFMYQNEGSS 371
             GL        +E+         A+  P   L      SI  P   IP  F +QNEG +
Sbjct: 340 TCGLVTEKPFPAVEVHIINNLTRTAIISPLQALCEKSIYSIFLPVKDIPTRFSHQNEGDT 399

Query: 372 ITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFR 431
           I++  P+ L    KV GF I  V+         YL  +        + D   +    +F 
Sbjct: 400 ISLQVPA-LDPGCKVTGFLISVVYAWEDSLESCYLSPNITVINRTRNFDWIYDPRVTFFP 458

Query: 432 GKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWK----------------- 474
            +   V  D +WL         W FE+    ++ + + D +W+                 
Sbjct: 459 CE---VEQDMMWL-------SCWLFEN---EINEKDVVDMSWRFQDEVEEGDQLEVLIDM 505

Query: 475 -----VKRCGFHPIYMH 486
                VKRCG H +Y H
Sbjct: 506 GFGIVVKRCGIHLLYHH 522



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 8/144 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS---LPVTISSLKC-LRT 56
           + S+K L  L  DGT+I+ +P +I  L  L++L+   C  + S    P T++     L+ 
Sbjct: 159 LGSLKSLVVLLADGTAISTIPETIGNLEKLKILSFHDCHLIFSPRKFPQTMNIFPASLQE 218

Query: 57  LELSGCS-KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRL 115
           L+L  C+      P     +  L  L L G +   +P+SI  LP L  L LN CK L  +
Sbjct: 219 LDLRHCNLSDSMIPHDFRGLFLLQTLKLCGNNFTSLPASIGNLPKLTKLLLNNCKRLEYI 278

Query: 116 PSSINGLKSLKTLNLSGCCKLENV 139
           P   +   SL+T + + C +L+ +
Sbjct: 279 PELQS---SLETFHANDCPRLQFI 299



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 6/118 (5%)

Query: 693 NLERLPRTISALKYLSTLNLSG---LSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           +L +    I +LK L  LNLS    L+K   F  +      +L+   +  ++  +  SI 
Sbjct: 56  SLHQFSEEIKSLKKLKFLNLSHSHELTKTPNFEGLPCLEKLILK---DCVSLVEVHDSIG 112

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
           +L   +L N K+CK+LK+LP +I  L SL+ +  SGC KL+ + E LG ++SL V L+
Sbjct: 113 ILGRLLLLNFKNCKSLKTLPGSICALSSLKKLNVSGCLKLEGLPEDLGSLKSLVVLLA 170



 Score = 45.8 bits (107), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L D   + E+  +I +L  L+ L    CK+L+ LP +I AL  L  LN+SG  K    P
Sbjct: 97  ILKDCVSLVEVHDSIGILGRLLLLNFKNCKSLKTLPGSICALSSLKKLNVSGCLKLEGLP 156

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL---KSLPSTIN 773
           E   S   L+ +  +GTAI  +P +I  L    + +  DC  +   +  P T+N
Sbjct: 157 EDLGSLKSLVVLLADGTAISTIPETIGNLEKLKILSFHDCHLIFSPRKFPQTMN 210


>gi|296089535|emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 110/181 (60%), Gaps = 2/181 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G TS+ EV  SI  L  L  L L+GCK L S   +I  ++ L+ L L
Sbjct: 499 FSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTL 557

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKLKKFP+I  +ME L +L+LDG+ I E+PSSI  L GL  L L  CK L  LP S 
Sbjct: 558 SGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSF 617

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L SL TL L GC +L+ +PD LG ++ L EL+  G+ I+    SI L+ NL+ L  +G
Sbjct: 618 CELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAG 677

Query: 180 C 180
           C
Sbjct: 678 C 678



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/108 (49%), Positives = 70/108 (64%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +M+ L +L+LDG+ I E+PSSI  L GL  L LK CK L+SLP +   L  L TL L GC
Sbjct: 572 NMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLGTLTLCGC 631

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           S+LK+ P  + S++ L++L  DG+ I EVP SI LL  L+ L L  CK
Sbjct: 632 SELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCK 679



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 88/146 (60%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G T + E+  +I  L  L+ L L GCK L+    +I  ++ L  L LSG S
Sbjct: 503 PNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCS 561

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPEI  + + L+E+ L+G+ I  LP+SI  L+G +  NLK+CK L SLP +   L 
Sbjct: 562 KLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELT 621

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SL  +   GCS+LK + + LG ++ L
Sbjct: 622 SLGTLTLCGCSELKELPDDLGSLQCL 647



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 108/227 (47%), Gaps = 11/227 (4%)

Query: 55  RTLELSGC-SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           + +EL+ C S+LK+  +     E L  + L  +           +P L  L L  C +LV
Sbjct: 458 KLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLV 517

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNL 172
            +  SI  LK L  LNL GC KL++   ++  +ESL+ L +SG +  +    I   M++L
Sbjct: 518 EVHPSIGALKKLIFLNLEGCKKLKSFSSSI-HMESLQILTLSGCSKLKKFPEIQENMESL 576

Query: 173 RSLYF--SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLG 229
             L+   SG  E P+S      L F  L   +C     LP     C LT L  L+ CG  
Sbjct: 577 MELFLDGSGIIELPSSIGCLNGLVF--LNLKNCKKLASLPQ--SFCELTSLGTLTLCGCS 632

Query: 230 E-AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           E   +P D+ +L  L EL  + +    +P SI+ L NL++L L  CK
Sbjct: 633 ELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCK 679



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 11/124 (8%)

Query: 647 CSRLWEEADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP+I       +++  DG+ I EL  +I  L GLV L L  CK L  LP+
Sbjct: 560 CSKL----KKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQ 615

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +   L  L TL L G S+ +E P+   S   L E++ +G+ I+ +P SI LL+     +L
Sbjct: 616 SFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSL 675

Query: 760 KDCK 763
             CK
Sbjct: 676 AGCK 679



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 96/209 (45%), Gaps = 32/209 (15%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC-KNLVRLPSSINGLKSLKTLNLSGCCK 135
           +L  LY  G  +   PS+    P  +L+ LN C   L +L     G + LK++ LS    
Sbjct: 436 NLRDLYWHGYPLKSFPSNFH--PE-KLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQH 492

Query: 136 LENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPA-SASWHLHL 193
           L   PD  G V +L  L + G T++     SI  +K L  L   GC +  + S+S H+  
Sbjct: 493 LTKTPDFSG-VPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHME- 550

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                       +L + +L+G   L K             P   +N+ SL EL+L+ +  
Sbjct: 551 ------------SLQILTLSGCSKLKKF------------PEIQENMESLMELFLDGSGI 586

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQ 282
           + LP+SI  L  L  L L++CK+L SLPQ
Sbjct: 587 IELPSSIGCLNGLVFLNLKNCKKLASLPQ 615



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 28/39 (71%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK 39
           + S++ L++L  DG+ I EVP SI LLT L+ L+L GCK
Sbjct: 641 LGSLQCLAELNADGSGIQEVPPSITLLTNLQKLSLAGCK 679


>gi|359493404|ref|XP_003634588.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1102

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 233/551 (42%), Gaps = 112/551 (20%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLK-GCKNLSSLPVTISSLKCLRTLELSGCSK 64
            DL  L+    ++T +P +     G  LL +     N+  L      LK L+ ++LS   +
Sbjct: 590  DLRYLHWQRCTLTSLPWN---FYGKHLLEINLKSSNIKQLWKGNKRLKELKGIDLSNSKQ 646

Query: 65   LKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L K P+  +SM +L +L L+G T + E+ SSI  L  L+ L L  C+NL  LP+SI GLK
Sbjct: 647  LVKMPKF-SSMPNLERLNLEGCTRLRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLK 705

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            SL+ L+L+GC  LE   +    +E LE L +  T I    SSI  M+ L+SL    C   
Sbjct: 706  SLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHMRGLKSLELINCENL 765

Query: 184  PASASWHLHLPFNLLGKSSCPVALML---PSLTGV--------CSLTKLDLSDCGLGEAA 232
             A       LP N +G  +C  +L +   P L  +        C LT LDL  C L E  
Sbjct: 766  VA-------LP-NSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEE 817

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            IP+D+  L SL+ L ++ N+   +PA I+ L  L  L +  C  L+ + ++P +L ++ A
Sbjct: 818  IPNDLWCLSSLEFLNVSENHMRCIPAGITQLCKLGTLLMNHCPMLEVIGELPSSLGWIEA 877

Query: 293  NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
            +GC SL T                             + S+L   L     S    +L+I
Sbjct: 878  HGCPSLET---------------------------ETSSSLLWSSLLKHLKSPIQRRLNI 910

Query: 353  VFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNK-VVGFAICCVFQVPKHSTGTYLFHSY 410
            + PGS  IP+W  +Q  G  ++V  P   Y  N  ++GF +               FH  
Sbjct: 911  IIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNNLLLGFVL--------------FFHHV 956

Query: 411  PAHELEC---------------------SMDGSGEGH-----------YIYFRGKFGHVV 438
            P  + EC                      +D     H           Y   R   G   
Sbjct: 957  PLDDDECVRTSGFIPECKLAISHGDQTERLDNISFYHRCKTYSISGLSYSSRRYDSGSTS 1016

Query: 439  SDHLWLLFLPR-------HGHNW-----QFESNLIRLSFRSISDPTWKVKRCGFHPIYMH 486
               LW+ + P+           W      F++ +   SF    + ++KVK CG H IY  
Sbjct: 1017 DPALWVTYFPQIRIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYAQ 1076

Query: 487  EVEEFDETTKQ 497
            + + + + +++
Sbjct: 1077 DQKHWPQPSRK 1087



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 2/158 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +SM +L  L L+G T + E+ SSI  LT L+ L L+ C+NL SLP +I  LK L  L L
Sbjct: 653 FSSMPNLERLNLEGCTRLRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSL 712

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           +GCS L+ F +I   ME L +L+L  T I+E+PSSIE + GL+ L L  C+NLV LP+SI
Sbjct: 713 NGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSI 772

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVE-SLEELDVSG 156
             L  L +L++  C KL N+PD L  ++  L  LD+ G
Sbjct: 773 GNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGG 810



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 71/129 (55%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +REL  +I  L  L  L L  C+NL+ LP +I  LK L  L+L+G S    F EIT  
Sbjct: 668 TRLRELHSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEAFSEITED 727

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            +QL  + L  T I  LP+SIE + G     L +C+NL +LP++I  L  L  ++   C 
Sbjct: 728 MEQLERLFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCP 787

Query: 788 KLKNVTETL 796
           KL N+ + L
Sbjct: 788 KLHNLPDNL 796



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 2/112 (1%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N+++L +    LK L  ++LS   +  + P+  SS   L  ++LEG T +R L +SI  L
Sbjct: 622 NIKQLWKGNKRLKELKGIDLSNSKQLVKMPKF-SSMPNLERLNLEGCTRLRELHSSIGHL 680

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +     NL++C+NLKSLP++I GL+SL  +  +GCS L+  +E    +E LE
Sbjct: 681 TRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEAFSEITEDMEQLE 732


>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
          Length = 2816

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 214/532 (40%), Gaps = 118/532 (22%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             + + +L +L LDG T++  + SS+  L  L  L++  C  L   P  I  L  L+TL+L
Sbjct: 646  FSRITNLEELVLDGCTNLCHLHSSLGRLRKLAFLSVSNCIKLRDFPA-IYKLVSLQTLDL 704

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCS L+KFP I   M  LSKLYLDGT+I E+P+SI     L LL L  CK L  LPSSI
Sbjct: 705  SGCSNLQKFPDISQHMPCLSKLYLDGTAITEIPASIAYASELVLLDLTNCKELKFLPSSI 764

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L  L+ L LSGC KL       G ++ L    +S   I     S+ L  N        
Sbjct: 765  PKLTLLRILTLSGCSKLGKFQQNSGNLDRLSGKRLSHLGILSSLKSLNLSGNR------- 817

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                       +HLP        C          G+ +L++LDL DC             
Sbjct: 818  ----------FIHLP--------C-------IFKGLSNLSRLDLHDC------------- 839

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
                                               +RLQ+LP +PP+++ + A+ C+SL 
Sbjct: 840  -----------------------------------RRLQTLPLLPPSVRILNASNCTSLE 864

Query: 300  TL-----FGALKLCRSKYTIINCIDSLKL-------LRKNGLAISM--LREYLELQAVSD 345
            ++     F + + C       NC+  +K        +R     +     R   + +  S 
Sbjct: 865  SILPESVFMSFRGC----LFGNCLRLMKYPSTMEPHIRSMATHVDQERWRSTYDEEYPSF 920

Query: 346  PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV-----NKVVGFAICCVFQVPKH 400
             G   S V PGS IP WF  + EG  I +      Y+      N  +G A+  V      
Sbjct: 921  AGIPFSNVVPGSGIPDWFRDRREGHDINIEVHQNWYSSTPGSNNNFLGLALSAVVAPQDG 980

Query: 401  STGTYLFHSYPAHELECSMDGSGEGHYI-------YFRGKFGHVVSDHLWLLFLPRHGHN 453
              G      YP  +L    D   E  +I        ++ +   + SDHLWL ++P     
Sbjct: 981  FLGRGW---YPYCDLYTQNDPKSESSHICSFTDGRTYQLEHTPIESDHLWLAYVPSFFSF 1037

Query: 454  WQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCN 505
               + + I+ SF +  +    VK CG  P+Y+ +    D      + +T  N
Sbjct: 1038 SCEKWSCIKFSFGTSGECV--VKSCGVCPVYIKDTTN-DHNKPMGSAYTDMN 1086



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 1/140 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL   T++  L  ++  L  L  L+++ C  L   P  I  L  L TL+LSG S  ++FP
Sbjct: 656 VLDGCTNLCHLHSSLGRLRKLAFLSVSNCIKLRDFP-AIYKLVSLQTLDLSGCSNLQKFP 714

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +I+     L +++L+GTAI  +PASI   S  +L +L +CK LK LPS+I  L  LR++ 
Sbjct: 715 DISQHMPCLSKLYLDGTAITEIPASIAYASELVLLDLTNCKELKFLPSSIPKLTLLRILT 774

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGCSKL    +  G ++ L
Sbjct: 775 LSGCSKLGKFQQNSGNLDRL 794



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 12/167 (7%)

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            L +  +N  N   LP ++  L +L  LEL++C  L SLP +P +++ + A+ C SL  + 
Sbjct: 1911 LGKCQVNSGNLDALPQTLDRLCSLRRLELQNCSGLPSLPALPSSVELINASNCKSLEDIS 1970

Query: 303  -GALKLCRSKYTIINCIDSLKL-------LRKNGLAISMLREYLELQAVSDPGHKL--SI 352
              ++ LC       NC    K        L++     +  R +   +   +P  ++  S 
Sbjct: 1971 PQSVFLCFGGSIFGNCFKLSKYPSTMERDLQRMAAHANQERWWSTFEQ-QNPNVQVPFST 2029

Query: 353  VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPK 399
            VFPGS+IP WF ++++G  I +      Y  N  +GFA+  V    K
Sbjct: 2030 VFPGSRIPDWFKHRSQGHEINIKVSPNWYTSN-FLGFALSAVIAPEK 2075



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 19/142 (13%)

Query: 32   LLTLKGCKNLSSLPVTISSLKCLRTL---------ELSGCSKLKKFPQIVASMEDLSKLY 82
            +L L G K +       + +  LR L         ++  CSKL+K P I   M  L +L 
Sbjct: 1798 VLNLTGLKEIRFTTAAFAKMTKLRMLIIISECSANQMQCCSKLEKSPVISQHMPCLRRLC 1857

Query: 83   LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC-----CK-- 135
            LDGT+I E+PSSI     L LL L  C+ L+ LPSSI+ L  L+TL+LSGC     C+  
Sbjct: 1858 LDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISKLTLLETLSLSGCLDLGKCQVN 1917

Query: 136  ---LENVPDTLGKVESLEELDV 154
               L+ +P TL ++ SL  L++
Sbjct: 1918 SGNLDALPQTLDRLCSLRRLEL 1939



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 16/133 (12%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L  L LDGT+ITE+PSSI   T L LL LK C+ L SLP +IS L  L TL LSGC    
Sbjct: 1853 LRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISKLTLLETLSLSGCL--- 1909

Query: 67   KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                      DL K  ++  ++  +P +++ L  L  L L  C  L  LP+  +   S++
Sbjct: 1910 ----------DLGKCQVNSGNLDALPQTLDRLCSLRRLELQNCSGLPSLPALPS---SVE 1956

Query: 127  TLNLSGCCKLENV 139
             +N S C  LE++
Sbjct: 1957 LINASNCKSLEDI 1969



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 24/158 (15%)

Query: 656 EFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +FPDI Q +        DGT I E+  +I     LV L L  CK L+ LP +I  L  L 
Sbjct: 712 KFPDISQHMPCLSKLYLDGTAITEIPASIAYASELVLLDLTNCKELKFLPSSIPKLTLLR 771

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLE--------------GTAIRGLPASIELLSGN 754
            L LSG SK  +F + + + D+L    L               G     LP   + LS  
Sbjct: 772 ILTLSGCSKLGKFQQNSGNLDRLSGKRLSHLGILSSLKSLNLSGNRFIHLPCIFKGLSNL 831

Query: 755 ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
              +L DC+ L++LP       S+R++  S C+ L+++
Sbjct: 832 SRLDLHDCRRLQTLPLLPP---SVRILNASNCTSLESI 866



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 716  SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
            SK  + P I+     L  + L+GTAI  LP+SI   +  +L +LK+C+ L SLPS+I+ L
Sbjct: 1838 SKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISKL 1897

Query: 776  RSLRMMYPSGCSKLKNVTETLGKVESLEV---RLSSWNRPKMQN 816
              L  +  SGC  L       G +++L     RL S  R ++QN
Sbjct: 1898 TLLETLSLSGCLDLGKCQVNSGNLDALPQTLDRLCSLRRLELQN 1941


>gi|359477827|ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1408

 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/250 (39%), Positives = 129/250 (51%), Gaps = 50/250 (20%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP  IE    L+ L L+ C+NL+SLP +I   K L TL  SGCS+L+ FP+I+ 
Sbjct: 1103 GSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 1161

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KLYL+GT+I E+PSSI+ L GL+ L L  CKNLV LP SI  L S KTL +S C
Sbjct: 1162 DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1221

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
                 +PD LG+++SLE L V                +L S+ F               L
Sbjct: 1222 PNFNKLPDNLGRLQSLEYLFVG---------------HLDSMNF--------------QL 1252

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
            P                SL+G+CSL  L L  C L E   PS+I  L SL   +  R   
Sbjct: 1253 P----------------SLSGLCSLRTLKLQGCNLRE--FPSEIYYLSSLGREF--RKTL 1292

Query: 254  VTLPASISGL 263
            +T  A  +G+
Sbjct: 1293 ITFIAESNGI 1302



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 181/406 (44%), Gaps = 82/406 (20%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKC----------LR 55
           +L+ L+ DG  +  +P +               KNL  L +  S++K           LR
Sbjct: 586 ELAYLHWDGYPLESLPMNFH------------AKNLVELSLRDSNIKQVWRGNKLHDKLR 633

Query: 56  TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRL 115
            ++LS    L + P   +S+ +L  L L+G +                  L  C NL  L
Sbjct: 634 VIDLSHSVHLIRIPDF-SSVPNLEILTLEGCTTV----------------LKRCVNLELL 676

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           P  I   K L+TL+ +GC KLE  P+  G +  L  LD+SGTAI    SSI  +  L++L
Sbjct: 677 PRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQTL 736

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
               C            L  + +    C ++          SL +LDL  C + E  IPS
Sbjct: 737 LLQEC------------LKLHQIPNHICHLS----------SLKELDLGHCNIMEGGIPS 774

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
           DI +L SL++L L + +F ++P +I+ L  LE L L  C  L+ +P++P  L+ + A+G 
Sbjct: 775 DICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIPELPSRLRLLDAHGS 834

Query: 296 --SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
             +S   LF  L      ++++NC    + L++   + S  R           G    IV
Sbjct: 835 NRTSSRALFLPL------HSLVNCFSWAQGLKRTSFSDSSYR-----------GKGTCIV 877

Query: 354 FPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP 398
            P +  IP+W M + +        P   +  N+ +GFA+CCV+ VP
Sbjct: 878 LPRTDGIPEWIMDRTKRYFTETELPQNWHQNNEFLGFALCCVY-VP 922



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 1/137 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ + IE    L  L L  C+NL  LP +I   K L+TL+ SG S+   FPEI  
Sbjct: 1103 GSDMNEVPI-IENPLELDSLCLRDCRNLTSLPSSIFGFKSLATLSCSGCSQLESFPEILQ 1161

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L +++L GTAI+ +P+SI+ L G     L++CKNL +LP +I  L S + +  S C
Sbjct: 1162 DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1221

Query: 787  SKLKNVTETLGKVESLE 803
                 + + LG+++SLE
Sbjct: 1222 PNFNKLPDNLGRLQSLE 1238



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 6/128 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  LYL+GT+I E+PSSI+ L GL+ L L+ CKNL +LP +I +L   +TL +S
Sbjct: 1160 LQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVS 1219

Query: 61   GCSKLKKFPQIVASMEDLSKLY---LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             C    K P  +  ++ L  L+   LD  +  ++P S+  L  L  L L  C NL   PS
Sbjct: 1220 RCPNFNKLPDNLGRLQSLEYLFVGHLDSMNF-QLP-SLSGLCSLRTLKLQGC-NLREFPS 1276

Query: 118  SINGLKSL 125
             I  L SL
Sbjct: 1277 EIYYLSSL 1284



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             M++L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P  I  L  L+ L+L  
Sbjct: 705 GDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGH 764

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 765 CNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTINQLSRLEVLNLSHCNNLEQIP 820



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 11/153 (7%)

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
            L  C NLE LPR I   K+L TL+ +G SK   FPEI     +L  + L GTAI  LP+
Sbjct: 666 VLKRCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPS 725

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           SI  L+G     L++C  L  +P+ I  L SL+ +    C    N+ E  G + S    L
Sbjct: 726 SITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGHC----NIME--GGIPSDICHL 779

Query: 807 SSWNRPKM-QNDFDCVEQSAVETVTKLAKAELL 838
           SS  +  + Q  F     S   T+ +L++ E+L
Sbjct: 780 SSLQKLNLEQGHF----SSIPTTINQLSRLEVL 808



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 26/223 (11%)

Query: 211  SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELE 270
            S+ G  SL  L  S C   E+  P  + ++ SL++LYLN      +P+SI  L  L+ L 
Sbjct: 1135 SIFGFKSLATLSCSGCSQLES-FPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLL 1193

Query: 271  LEDCKRLQSLPQIPPNLQFVR---ANGCSSLVTLFGALKLCRS-KYTIINCIDSLKL--- 323
            L +CK L +LP+   NL   +    + C +   L   L   +S +Y  +  +DS+     
Sbjct: 1194 LRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMNFQLP 1253

Query: 324  -------LRKNGLAISMLREY-LELQAVSDPGHK-----LSIVFPGSQIPKWFMYQNEGS 370
                   LR   L    LRE+  E+  +S  G +     ++ +   + IP+W  +Q  G 
Sbjct: 1254 SLSGLCSLRTLKLQGCNLREFPSEIYYLSSLGREFRKTLITFIAESNGIPEWISHQKSGF 1313

Query: 371  SITVTRPSYLYNVNKVVGFAIC--CV---FQVPKHSTGTYLFH 408
             IT+  P   Y  +  +GF +C  CV    +  KH T + L++
Sbjct: 1314 KITMKLPWSWYENDDFLGFVLCSLCVPLEIETKKHRTISQLYN 1356



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 19/143 (13%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I+Q +        +GT I+E+  +I+ L GL  L L  CKNL  LP 
Sbjct: 1150 CSQL----ESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPE 1205

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI----HLEGTAIRGLPASIELLSGNI 755
            +I  L    TL +S    F + P+    R Q LE     HL+    + LP+   L S   
Sbjct: 1206 SICNLTSFKTLVVSRCPNFNKLPD-NLGRLQSLEYLFVGHLDSMNFQ-LPSLSGLCSLRT 1263

Query: 756  LSNLKDCKNLKSLPSTINGLRSL 778
            L  L+ C NL+  PS I  L SL
Sbjct: 1264 LK-LQGC-NLREFPSEIYYLSSL 1284


>gi|224133158|ref|XP_002321497.1| predicted protein [Populus trichocarpa]
 gi|222868493|gb|EEF05624.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 204/457 (44%), Gaps = 78/457 (17%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS------------------ 43
           + +  L +L L+ +++ E+P S+  L+ LE L+L  C++L++                  
Sbjct: 145 SDVSGLKELSLNQSAVEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSINR 204

Query: 44  -----LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
                LP  I SL  L+TL   GC  L K P  +  +  +S+L LD TSI+ +P  I  L
Sbjct: 205 SAIKELPPAIGSLPYLKTLLAGGCGSLSKLPDSIGGLASISELELDETSISHLPEQIGGL 264

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG-----------------------CCK 135
             +E LY+ +C +L  LP SI  + SL TL+L G                       C K
Sbjct: 265 KMIEKLYMRKCTSLRSLPESIGSMLSLTTLDLFGSNIIELPESLGMLENLVMLRLHQCRK 324

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L+ +P ++GK++SL  L +  TA+     S   + NL  L      EP  S S    L  
Sbjct: 325 LQKLPVSIGKLKSLCHLLMEKTAVTVLPESFGKLSNLMILKMR--KEPLESPSTQEQL-- 380

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
                      ++LPS     SL +   +        IP D + L SL+ L L  NNF +
Sbjct: 381 -----------VVLPSSFFELSLLEELNARAWRISGKIPDDFEKLSSLEILDLGHNNFSS 429

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-----FGALKL--- 307
           LP+S+ GL  L EL L  C+ L+SLP +P +L+ V  + C +L T+      G+L L   
Sbjct: 430 LPSSLCGLSLLRELHLPHCEELESLPPLPSSLEEVDVSNCFALETMSDVSNLGSLTLLNM 489

Query: 308 --CRSKYTI--INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWF 363
             C     I  I C+ SLK L  +      L+    L  V     + ++  PGS+IP WF
Sbjct: 490 TNCEKVVDIPGIECLKSLKRLYMSNCKACSLKVKRRLSKVCLRNIR-NLSMPGSKIPDWF 548

Query: 364 MYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
               E    +  R   +  V  ++G  +    Q+P+H
Sbjct: 549 --SQEDVKFSERRNREIKAV--IIGVVVSLDCQIPEH 581



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 73/275 (26%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE L L+GC  L+ +  ++ + + L  L L+ CS L +FP  V+ +++LS   L+ +++ 
Sbjct: 105 LEKLNLEGCIRLTKVHKSVGNARTLLQLNLNDCSNLVEFPSDVSGLKELS---LNQSAVE 161

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLK-----------------------SLK 126
           E+P S+  L  LE L L  C++L  +P S+  L+                        LK
Sbjct: 162 ELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSINRSAIKELPPAIGSLPYLK 221

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           TL   GC  L  +PD++G + S+ EL++  T+I      I  +K +  LY   C      
Sbjct: 222 TLLAGGCGSLSKLPDSIGGLASISELELDETSISHLPEQIGGLKMIEKLYMRKC------ 275

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                                           T L          ++P  I ++ SL  L
Sbjct: 276 --------------------------------TSL---------RSLPESIGSMLSLTTL 294

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            L  +N + LP S+  L NL  L L  C++LQ LP
Sbjct: 295 DLFGSNIIELPESLGMLENLVMLRLHQCRKLQKLP 329



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 34/256 (13%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP--SSIELLPGLELLYLNECKN 111
           L+ L+   C  +K  P   A + +L+ L L  + I  V   +S ++   L ++ L+ C N
Sbjct: 35  LKWLQWKNCP-MKNLPSDYA-LHELAVLDLSESRIERVWGWTSNKVAKNLMVMDLHGCYN 92

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL-------------DVSG-- 156
           LV  P  ++G K+L+ LNL GC +L  V  ++G   +L +L             DVSG  
Sbjct: 93  LVACPD-LSGCKNLEKLNLEGCIRLTKVHKSVGNARTLLQLNLNDCSNLVEFPSDVSGLK 151

Query: 157 ------TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVA 206
                 +A+     S+  + NL  L    C      P +  +  L    ++   +   + 
Sbjct: 152 ELSLNQSAVEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSI---NRSAIK 208

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            + P++  +  L  L    CG   + +P  I  L S+ EL L+  +   LP  I GL  +
Sbjct: 209 ELPPAIGSLPYLKTLLAGGCG-SLSKLPDSIGGLASISELELDETSISHLPEQIGGLKMI 267

Query: 267 EELELEDCKRLQSLPQ 282
           E+L +  C  L+SLP+
Sbjct: 268 EKLYMRKCTSLRSLPE 283



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 25/193 (12%)

Query: 660 IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL------- 712
           + +V  + + I+EL  AI  L  L  L   GC +L +LP +I  L  +S L L       
Sbjct: 197 LTEVSINRSAIKELPPAIGSLPYLKTLLAGGCGSLSKLPDSIGGLASISELELDETSISH 256

Query: 713 -----SGL-----------SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
                 GL           +  R  PE   S   L  + L G+ I  LP S+ +L   ++
Sbjct: 257 LPEQIGGLKMIEKLYMRKCTSLRSLPESIGSMLSLTTLDLFGSNIIELPESLGMLENLVM 316

Query: 757 SNLKDCKNLKSLPSTINGLRSL--RMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKM 814
             L  C+ L+ LP +I  L+SL   +M  +  + L      L  +  L++R      P  
Sbjct: 317 LRLHQCRKLQKLPVSIGKLKSLCHLLMEKTAVTVLPESFGKLSNLMILKMRKEPLESPST 376

Query: 815 QNDFDCVEQSAVE 827
           Q     +  S  E
Sbjct: 377 QEQLVVLPSSFFE 389



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 24/144 (16%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
           GL +L+LN    +E LP ++ +L  L  L+L         PE   +   L E+ +  +AI
Sbjct: 149 GLKELSLNQSA-VEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSINRSAI 207

Query: 742 RGLPASI-------ELLSGNI--LSNLKDC--------------KNLKSLPSTINGLRSL 778
           + LP +I        LL+G    LS L D                ++  LP  I GL+ +
Sbjct: 208 KELPPAIGSLPYLKTLLAGGCGSLSKLPDSIGGLASISELELDETSISHLPEQIGGLKMI 267

Query: 779 RMMYPSGCSKLKNVTETLGKVESL 802
             +Y   C+ L+++ E++G + SL
Sbjct: 268 EKLYMRKCTSLRSLPESIGSMLSL 291



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 26/143 (18%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L GC  L ++ +++   + L  LNL+  S   EFP   S    L E+ L  +A+ 
Sbjct: 105 LEKLNLEGCIRLTKVHKSVGNARTLLQLNLNDCSNLVEFPSDVSG---LKELSLNQSAVE 161

Query: 743 GLPASIELLSGNILSNLKDCKNL-----------------------KSLPSTINGLRSLR 779
            LP S+  LS     +L  C++L                       K LP  I  L  L+
Sbjct: 162 ELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSINRSAIKELPPAIGSLPYLK 221

Query: 780 MMYPSGCSKLKNVTETLGKVESL 802
            +   GC  L  + +++G + S+
Sbjct: 222 TLLAGGCGSLSKLPDSIGGLASI 244


>gi|357474671|ref|XP_003607620.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508675|gb|AES89817.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1381

 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 205/460 (44%), Gaps = 67/460 (14%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            L+ L+LS    L+K P     M +L +L L G   + ++  SI +L  L  + L +CKNL
Sbjct: 943  LKILDLSHSKNLRKVPDF-GEMPNLEELNLKGCIKLVQIDPSIGVLRKLVFMKLKDCKNL 1001

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-FLMKN 171
            V +P++I GL SLK LNLSGC K+ N P  L K +S + L  S +     TSS+ +    
Sbjct: 1002 VSIPNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDSSDILFHSQST----TSSLKWTTIG 1057

Query: 172  LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA 231
            L SLY                        +SC    +LPS   +  L+++D+S CGL  +
Sbjct: 1058 LHSLYHEVL--------------------TSC----LLPSFLSIYCLSEVDISFCGL--S 1091

Query: 232  AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
             +P  I  L  L+ L +  NNFVTLP S+  L  L  L LE CK L+SLPQ+P    F  
Sbjct: 1092 YLPDAIGCLLRLERLNIGGNNFVTLP-SLRELSKLVYLNLEHCKLLESLPQLPFPTAFEH 1150

Query: 292  ANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG---- 347
                   V L            I NC    +    N +A S + +   +QA   P     
Sbjct: 1151 MTTYKRTVGL-----------VIFNCPKLGESEDCNSMAFSWMIQL--IQARQQPSTFSY 1197

Query: 348  -HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYL-YNVNKVVGFAICCVFQVPKHSTGTY 405
               + IV PGS+IP WF  Q+EG SI +     +  N N  +G A C VF V      T 
Sbjct: 1198 EDIIKIVIPGSEIPIWFNNQSEGDSIRMDLSQIMDNNDNDFIGIACCAVFSVAPVDPTTT 1257

Query: 406  LFHSYPAHELECSMDGSGEGHYIYFRG--KFGHVV--SDHLWLLFLPRH----------G 451
                 P  EL  S   S    +I      +  H+V  S+H+ L++ P+           G
Sbjct: 1258 TCARRPKIELRFSNSNSHLFSFIIIPVILERDHIVVKSNHMCLMYFPQKSLFDILKWIDG 1317

Query: 452  HNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEF 491
                 +   ++ S         +V+ CG+H +Y  +++E 
Sbjct: 1318 TLTHLDDINMKASIMKGQGLDLEVQNCGYHWVYKPDLQEL 1357



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 7/158 (4%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               M +L +L L G   + ++  SI +L  L  + LK CKNL S+P  I  L  L+ L L
Sbjct: 960  FGEMPNLEELNLKGCIKLVQIDPSIGVLRKLVFMKLKDCKNLVSIPNNILGLSSLKYLNL 1019

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSK+   P+ +   +    L+   ++ + +  +     GL  LY +E      LPS +
Sbjct: 1020 SGCSKVFNNPRHLKKFDSSDILFHSQSTTSSLKWTT---IGLHSLY-HEVLTSCLLPSFL 1075

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            + +  L  +++S  C L  +PD +G +  LE L++ G 
Sbjct: 1076 S-IYCLSEVDIS-FCGLSYLPDAIGCLLRLERLNIGGN 1111



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 3/127 (2%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
            LV+L +    ++++L +    L  L  L+LS     R+ P+       L E++L+G   +
Sbjct: 920  LVELIMRH-SSVKQLWKDKKYLPNLKILDLSHSKNLRKVPDF-GEMPNLEELNLKGCIKL 977

Query: 742  RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
              +  SI +L   +   LKDCKNL S+P+ I GL SL+ +  SGCSK+ N    L K +S
Sbjct: 978  VQIDPSIGVLRKLVFMKLKDCKNLVSIPNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDS 1037

Query: 802  LEVRLSS 808
             ++   S
Sbjct: 1038 SDILFHS 1044


>gi|105922810|gb|ABF81438.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1524

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 4/172 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +LS L L+G TS++EV  S+     L+ + L  CK+   LP  +  ++ L+   L
Sbjct: 736 LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLE-MESLKVFTL 794

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GC+KL+KFP IV +M  L +L LDGT IAE+ SSI  L GLE+L +N CKNL  +PSSI
Sbjct: 795 DGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSI 854

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
             LKSLK L+LSGC +L+N+P+ LGKVESLEE D  G +  RP   I    N
Sbjct: 855 GCLKSLKKLDLSGCSELKNIPENLGKVESLEEFD--GLSNPRPGFGIAFPGN 904



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++  ++ +G T + E+  ++     L  + L  CK+   LP  +  ++ L    L G +
Sbjct: 740 PNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLE-MESLKVFTLDGCT 798

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FP+I  + + L+E+ L+GT I  L +SI  L G  + ++ +CKNL+S+PS+I  L+
Sbjct: 799 KLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLK 858

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  SGCS+LKN+ E LGKVESLE
Sbjct: 859 SLKKLDLSGCSELKNIPENLGKVESLE 885



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 28/195 (14%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ + LS    L K P +   + +LS L L+G TS++EV  S+     L+ + L  CK+ 
Sbjct: 719 LKVINLSNSLNLSKTPDLTG-IPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSF 777

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LPS++  ++SLK   L GC KLE  PD +G +  L EL + GT I   +SSI      
Sbjct: 778 RILPSNLE-MESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSI------ 830

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEA 231
                            H  +   +L  ++C     +PS  G + SL KLDLS C     
Sbjct: 831 -----------------HHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS-ELK 872

Query: 232 AIPSDIDNLHSLKEL 246
            IP ++  + SL+E 
Sbjct: 873 NIPENLGKVESLEEF 887



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           C++L    ++FPDIV  ++       DGT I ELS +I  L GL  L++N CKNLE +P 
Sbjct: 797 CTKL----EKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPS 852

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  LK L  L+LSG S+ +  PE
Sbjct: 853 SIGCLKSLKKLDLSGCSELKNIPE 876



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 149/359 (41%), Gaps = 77/359 (21%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKLKK 67
           ++LD   I E   +++  + +  L L    N  LS  P  +S  K LR LE       K 
Sbjct: 630 IFLDMPGIKEAQWNMKAFSKMSRLRLLKIDNVQLSEGPEDLS--KELRFLEWHSYPS-KS 686

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P  +  ++ L +L++  +SI ++    +    L+++ L+   NL + P  + G+ +L +
Sbjct: 687 LPAGL-QVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD-LTGIPNLSS 744

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           L L GC  L  V  +LG+ ++L+ +++      R   S   M++L+     GC       
Sbjct: 745 LILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLKVFTLDGC------- 797

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                                          TKL+           P  + N++ L EL 
Sbjct: 798 -------------------------------TKLE---------KFPDIVGNMNCLMELC 817

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
           L+      L +SI  L+ LE L + +CK L+S+P              SS+    G LK 
Sbjct: 818 LDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIP--------------SSI----GCLKS 859

Query: 308 CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
            + K  +  C   LK + +N   +  L E+     +S+P     I FPG++IP WF ++
Sbjct: 860 LK-KLDLSGC-SELKNIPENLGKVESLEEF---DGLSNPRPGFGIAFPGNEIPGWFNHR 913



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR + P+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 590 GKEIVRCEDPKEPGKRSRLW----TYEDVSLALMDNTGKEK----IEAIF----LDMPGI 637

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S                      D L
Sbjct: 638 KEAQWNMKAFSKMSRLRLLKIDNV-QLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGL 696

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +  NL   P  + G+ +L  +   GC+ L  
Sbjct: 697 VELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSE 755

Query: 792 VTETLGKVESLE 803
           V  +LG+ ++L+
Sbjct: 756 VHPSLGRHKNLQ 767


>gi|359473398|ref|XP_002268324.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
            vinifera]
          Length = 1378

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 198/425 (46%), Gaps = 66/425 (15%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
            +  +  L +L L+G+ + E+P SI  LT LE L+L  C+ LS+                 
Sbjct: 811  IGRLSSLRELSLNGSGLEELPDSIGSLTNLERLSLMRCRLLSAIPDSVGRLRSLIELFIC 870

Query: 44   ------LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                  LP +I SL  LR L LS C  L K P  +  +  L++  LDGT +  VP  +  
Sbjct: 871  NSSIKELPASIGSLSQLRYLSLSHCRSLIKLPDSIEGLVSLARFQLDGTLLTGVPDQVGS 930

Query: 98   LPGLELLYLNECKN----------------------LVRLPSSINGLKSLKTLNLSGCCK 135
            L  LE L +  C+                       +  LP SI  L+ L  L L+ C +
Sbjct: 931  LNMLETLEMRNCEIFSSFPEINNMSSLTTLILDNSLITELPESIGKLERLNMLMLNNCKQ 990

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            L+ +P ++ K+++L  L ++ TA+     +  ++ NLR+L  +   +P A+   H  L  
Sbjct: 991  LQRLPASIRKLKNLCSLLMTRTAVTELPENFGMLSNLRTLKMAKHPDPEATGE-HTELTN 1049

Query: 196  NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
             +L ++  PV L++ S + +  L +LD     +  +   SD + L SL++L L  NNF +
Sbjct: 1050 LILQENPKPVVLLM-SFSNLFMLKELDARAWKISGSI--SDFEKLSSLEDLNLGHNNFCS 1106

Query: 256  LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL-------- 307
            LP+S+ GL  L+ L L  CK + SLP +P +L  +  + C +L ++     L        
Sbjct: 1107 LPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSNCCALQSVSDLSNLKSLEDLNL 1166

Query: 308  --CRSKYTI--INCIDSLKLLRKNG--LAISMLREYLELQAVSDPGHKLSIVFPGSQIPK 361
              C+    I  + C+ SLK    +G    +  L+  +   A+    H  ++  PGS+IP 
Sbjct: 1167 TNCKKIMDIPGLQCLKSLKRFYASGCNACLPALKSRITKVALK---HLYNLSVPGSEIPN 1223

Query: 362  WFMYQ 366
            WF+ +
Sbjct: 1224 WFVQE 1228



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 152/312 (48%), Gaps = 36/312 (11%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+  +  S+  L  L  L L GC NL   P  +S L+ L    LSGC+KLK+ P+ ++SM
Sbjct: 708  SLVTIHKSVGDLRTLLHLNLMGCSNLLEFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSM 767

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG--- 132
              L +L +D T+I  +P SI  L  LE   L+ C +L +LP  I  L SL+ L+L+G   
Sbjct: 768  TSLRELLVDKTAIVNLPDSIFRLKKLEKFSLDSCSSLKQLPDCIGRLSSLRELSLNGSGL 827

Query: 133  --------------------CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
                                C  L  +PD++G++ SL EL +  ++I+   +SI  +  L
Sbjct: 828  EELPDSIGSLTNLERLSLMRCRLLSAIPDSVGRLRSLIELFICNSSIKELPASIGSLSQL 887

Query: 173  RSLYFSGCN---EPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
            R L  S C    + P S    + L  F L G     V   + SL     L  L++ +C +
Sbjct: 888  RYLSLSHCRSLIKLPDSIEGLVSLARFQLDGTLLTGVPDQVGSLN---MLETLEMRNCEI 944

Query: 229  GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
              ++ P +I+N+ SL  L L+ +    LP SI  L  L  L L +CK+LQ LP     L+
Sbjct: 945  F-SSFP-EINNMSSLTTLILDNSLITELPESIGKLERLNMLMLNNCKQLQRLPASIRKLK 1002

Query: 289  FVRANGCSSLVT 300
                N CS L+T
Sbjct: 1003 ----NLCSLLMT 1010



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L GC NL   P  +S L++L   NLSG +K +E PE  SS   L E+ ++ TAI 
Sbjct: 722 LLHLNLMGCSNLLEFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIV 781

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +L  C +LK LP  I  L SLR +  +G S L+ + +++G + +L
Sbjct: 782 NLPDSIFRLKKLEKFSLDSCSSLKQLPDCIGRLSSLRELSLNG-SGLEELPDSIGSLTNL 840

Query: 803 EVRLS 807
           E RLS
Sbjct: 841 E-RLS 844



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 128/307 (41%), Gaps = 61/307 (19%)

Query: 14  GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS--------GCSKL 65
           G +   +PS       L+ L  KGC  L +LP T    K L  L+LS        GC   
Sbjct: 618 GGNFKNIPSE------LKWLQWKGCP-LKTLPSTFCPRK-LTVLDLSESKIERVWGCHNK 669

Query: 66  KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           K     VA  E+L  + L G  S+ ++P  +     LE L L  C +LV +  S+  L++
Sbjct: 670 K-----VA--ENLMVMNLSGCNSLTDLPD-VSGHQTLEKLILERCLSLVTIHKSVGDLRT 721

Query: 125 LKTL------------------------NLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           L  L                        NLSGC KL+ +P+ +  + SL EL V  TAI 
Sbjct: 722 LLHLNLMGCSNLLEFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIV 781

Query: 161 RPTSSIFLMKNLRSLYFSGCN------EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
               SIF +K L       C+      +     S    L  N  G    P      S+  
Sbjct: 782 NLPDSIFRLKKLEKFSLDSCSSLKQLPDCIGRLSSLRELSLNGSGLEELP-----DSIGS 836

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           + +L +L L  C L  +AIP  +  L SL EL++  ++   LPASI  L  L  L L  C
Sbjct: 837 LTNLERLSLMRCRL-LSAIPDSVGRLRSLIELFICNSSIKELPASIGSLSQLRYLSLSHC 895

Query: 275 KRLQSLP 281
           + L  LP
Sbjct: 896 RSLIKLP 902



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 3/140 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + +++L   I  L  L +L+LNG   LE LP +I +L  L  L+L         P+    
Sbjct: 802 SSLKQLPDCIGRLSSLRELSLNG-SGLEELPDSIGSLTNLERLSLMRCRLLSAIPDSVGR 860

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC- 786
              L+E+ +  ++I+ LPASI  LS     +L  C++L  LP +I GL SL      G  
Sbjct: 861 LRSLIELFICNSSIKELPASIGSLSQLRYLSLSHCRSLIKLPDSIEGLVSLARFQLDGTL 920

Query: 787 -SKLKNVTETLGKVESLEVR 805
            + + +   +L  +E+LE+R
Sbjct: 921 LTGVPDQVGSLNMLETLEMR 940



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 42/184 (22%)

Query: 651  WEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
            + E +    +  ++ D + I EL  +I  L  L  L LN CK L+RLP +I  LK L +L
Sbjct: 948  FPEINNMSSLTTLILDNSLITELPESIGKLERLNMLMLNNCKQLQRLPASIRKLKNLCSL 1007

Query: 711  ------------NLSGLSKFREF-------PEITSSRDQLLEIHLEGT------------ 739
                        N   LS  R         PE T    +L  + L+              
Sbjct: 1008 LMTRTAVTELPENFGMLSNLRTLKMAKHPDPEATGEHTELTNLILQENPKPVVLLMSFSN 1067

Query: 740  --AIRGLPASIELLSGNI-----LSNLKDC----KNLKSLPSTINGLRSLRMMYPSGCSK 788
               ++ L A    +SG+I     LS+L+D      N  SLPS++ GL  L+ ++   C +
Sbjct: 1068 LFMLKELDARAWKISGSISDFEKLSSLEDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKE 1127

Query: 789  LKNV 792
            + ++
Sbjct: 1128 INSL 1131


>gi|357474813|ref|XP_003607692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508747|gb|AES89889.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1181

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 214/516 (41%), Gaps = 134/516 (25%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            + + +LS+L L G+SIT++    + L  L  L L   KNL+++P   +    L+ L L G
Sbjct: 699  SQLDELSELILVGSSITQLWKDKKYLPNLRNLDLSCSKNLATMP-HFAEFPNLKRLNLEG 757

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            C                        S+ ++ SSI LL  L  L L  CKNL+ +P+ I+G
Sbjct: 758  C-----------------------VSLVQINSSIGLLRELVFLNLKNCKNLICIPNEISG 794

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL-YFSGC 180
            L SLK   + GC                              S+ F  KN ++  YFS C
Sbjct: 795  LTSLKYFTICGC------------------------------SNTF--KNSKAHGYFSSC 822

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                       +LPSL  V  L+++D+S C L +  IP  + +L
Sbjct: 823  ---------------------------LLPSLPSVSCLSEIDISFCNLSQ--IPDALGSL 853

Query: 241  HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
              L+ L L  NNFVTLP S+     LE L LE CK+L SLP++P             L  
Sbjct: 854  TWLERLNLRGNNFVTLP-SLRDHSRLEYLNLEHCKQLTSLPELP-------------LPA 899

Query: 301  LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLE-LQAVSDPGHKLSIVFPGSQI 359
                 K  R+   I NC +  +  +   + +S +  +++  Q  S   H++ IV PG++I
Sbjct: 900  AIKQDKHKRAGMFIFNCPELGEREQCINMTLSWMIHFIQGKQDSSASFHQIDIVIPGTEI 959

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
            PKWF  +  G SI++     +Y+ N ++G A C VF V         +   P   L    
Sbjct: 960  PKWFNNRRMGRSISIDPSPIVYDDN-IIGIACCAVFSVELFDPTKTRYEWGPIIRLGFKS 1018

Query: 420  DGSGEGHYIYFRGK-FGHVV---SDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTW-- 473
              +   +Y+      + H++   S+H+WL++         F+  L     RSI +  W  
Sbjct: 1019 SNAANSNYVVIPVTLYRHLITVKSNHMWLIY---------FDRELFFSFLRSIDNTLWEL 1069

Query: 474  -----------------KVKRCGFHPIYMHEVEEFD 492
                             +VK CGF  ++  + + FD
Sbjct: 1070 DHIKMEASVMNGQGLHLEVKNCGFRWVFKQDQQPFD 1105



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 15/136 (11%)

Query: 653 EADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL 712
           E DE+P +   L   + + ELS  I +   + QL     K+ + LP  +  L    + NL
Sbjct: 686 EWDEYPFLY--LPSSSQLDELSELILVGSSITQL----WKDKKYLP-NLRNLDLSCSKNL 738

Query: 713 SGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           + +  F EFP        L  ++LEG  ++  + +SI LL   +  NLK+CKNL  +P+ 
Sbjct: 739 ATMPHFAEFP-------NLKRLNLEGCVSLVQINSSIGLLRELVFLNLKNCKNLICIPNE 791

Query: 772 INGLRSLRMMYPSGCS 787
           I+GL SL+     GCS
Sbjct: 792 ISGLTSLKYFTICGCS 807


>gi|109676360|gb|ABG37662.1| NBS-LRR type disease resistance-like protein [Populus trichocarpa]
          Length = 1138

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 110/172 (63%), Gaps = 4/172 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +LS L L+G TS++EV  S+     L+ + L  CK+   LP  +  ++ L+   L
Sbjct: 282 LTGIPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLE-MESLKVFTL 340

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GC+KL+KFP IV +M  L +L LDGT IAE+ SSI  L GLE+L +N CKNL  +PSSI
Sbjct: 341 DGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSI 400

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
             LKSLK L+LSGC +L+N+P+ LGKVESLEE D  G +  RP   I    N
Sbjct: 401 GCLKSLKKLDLSGCSELKNIPENLGKVESLEEFD--GLSNPRPGFGIAFPGN 450



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 90/147 (61%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++  ++ +G T + E+  ++     L  + L  CK+   LP  +  ++ L    L G +
Sbjct: 286 PNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLE-MESLKVFTLDGCT 344

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FP+I  + + L+E+ L+GT I  L +SI  L G  + ++ +CKNL+S+PS+I  L+
Sbjct: 345 KLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPSSIGCLK 404

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  SGCS+LKN+ E LGKVESLE
Sbjct: 405 SLKKLDLSGCSELKNIPENLGKVESLE 431



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 28/195 (14%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ + LS    L K P +   + +LS L L+G TS++EV  S+     L+ + L  CK+ 
Sbjct: 265 LKVINLSNSLNLSKTPDLTG-IPNLSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSF 323

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LPS++  ++SLK   L GC KLE  PD +G +  L EL + GT I   +SSI      
Sbjct: 324 RILPSNLE-MESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSI------ 376

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEA 231
                            H  +   +L  ++C     +PS  G + SL KLDLS C     
Sbjct: 377 -----------------HHLIGLEVLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS-ELK 418

Query: 232 AIPSDIDNLHSLKEL 246
            IP ++  + SL+E 
Sbjct: 419 NIPENLGKVESLEEF 433



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           C++L    ++FPDIV  ++       DGT I ELS +I  L GL  L++N CKNLE +P 
Sbjct: 343 CTKL----EKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIPS 398

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  LK L  L+LSG S+ +  PE
Sbjct: 399 SIGCLKSLKKLDLSGCSELKNIPE 422



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 149/359 (41%), Gaps = 77/359 (21%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKLKK 67
           ++LD   I E   +++  + +  L L    N  LS  P  +S  K LR LE       K 
Sbjct: 176 IFLDMPGIKEAQWNMKAFSKMSRLRLLKIDNVQLSEGPEDLS--KELRFLEWHSYPS-KS 232

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P  +  ++ L +L++  +SI ++    +    L+++ L+   NL + P  + G+ +L +
Sbjct: 233 LPAGL-QVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD-LTGIPNLSS 290

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           L L GC  L  V  +LG+ ++L+ +++      R   S   M++L+     GC       
Sbjct: 291 LILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNLEMESLKVFTLDGC------- 343

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                                          TKL+           P  + N++ L EL 
Sbjct: 344 -------------------------------TKLE---------KFPDIVGNMNCLMELC 363

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
           L+      L +SI  L+ LE L + +CK L+S+P              SS+    G LK 
Sbjct: 364 LDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIP--------------SSI----GCLKS 405

Query: 308 CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
            + K  +  C   LK + +N   +  L E+     +S+P     I FPG++IP WF ++
Sbjct: 406 LK-KLDLSGC-SELKNIPENLGKVESLEEF---DGLSNPRPGFGIAFPGNEIPGWFNHR 459



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR + P+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 136 GKEIVRCEDPKEPGKRSRLW----TYEDVSLALMDNTGKEK----IEAIF----LDMPGI 183

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S                      D L
Sbjct: 184 KEAQWNMKAFSKMSRLRLLKIDNV-QLSEGPEDLSKELRFLEWHSYPSKSLPAGLQVDGL 242

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +  NL   P  + G+ +L  +   GC+ L  
Sbjct: 243 VELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPD-LTGIPNLSSLILEGCTSLSE 301

Query: 792 VTETLGKVESLE 803
           V  +LG+ ++L+
Sbjct: 302 VHPSLGRHKNLQ 313


>gi|359493343|ref|XP_002277693.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1140

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 213/498 (42%), Gaps = 115/498 (23%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L G T++ +V  S+  L+ L LL L+ C NL  LP +I  L  L TL LSGCSK
Sbjct: 709  NLEVLVLKGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLP-SIRWLVSLETLILSGCSK 767

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L+K P++   M  LSKL LDGT+I +                                  
Sbjct: 768  LEKLPEVPQHMPYLSKLCLDGTAITD---------------------------------- 793

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEP 183
                  SG  +L N  +  G ++ L EL+   + IR+ P+SS+ L  +         N  
Sbjct: 794  -----FSGWSELGNFQENSGNLDCLNELNSDDSTIRQLPSSSVVLRNH---------NAS 839

Query: 184  PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
            P+SA    H                  S+   C+LT                      SL
Sbjct: 840  PSSAPRRSH------------------SIRPHCTLT----------------------SL 859

Query: 244  KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-- 301
              L L+  + + LP ++  L  L+ LEL +C+RLQ+LP +P +++ + A+ C+SL  +  
Sbjct: 860  TYLNLSGTSIIRLPWNLERLFMLQRLELTNCRRLQALPVLPSSIERMNASNCTSLELVSP 919

Query: 302  ------FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP--GHKLSIV 353
                  FG   L  + + + NC   ++   ++  +  +   +    A   P  G   S V
Sbjct: 920  QSVFKRFGGF-LFGNCFKLRNCHSKMEHDVQSVASHVVPGAWRSTYASWHPNVGIPFSTV 978

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
            FPGS+IP WF + ++G  I +  P   Y  +  +GFA+  V      S   Y++     H
Sbjct: 979  FPGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAVMAPQHDSRAWYMYCDLDTH 1038

Query: 414  ELE------CSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRS 467
            +L       CS  GS       ++ +   + SDH+WL ++P        + + I+ SF S
Sbjct: 1039 DLNSNSHRICSFFGSWT-----YQLQHTPIESDHVWLAYVPSFLSFSCEKWSHIKFSFSS 1093

Query: 468  ISDPTWKVKRCGFHPIYM 485
                   VK CGF P+Y+
Sbjct: 1094 SGGCV--VKSCGFCPVYI 1109



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 7/131 (5%)

Query: 661 VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE 720
           V VL   T++R++  ++  L  L+ L L  C NLE LP +I  L  L TL LSG SK  +
Sbjct: 712 VLVLKGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLP-SIRWLVSLETLILSGCSKLEK 770

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
            PE+      L ++ L+GTAI       EL  GN   N  +   L  L S  + +R L  
Sbjct: 771 LPEVPQHMPYLSKLCLDGTAITDFSGWSEL--GNFQENSGNLDCLNELNSDDSTIRQL-- 826

Query: 781 MYPSGCSKLKN 791
             PS    L+N
Sbjct: 827 --PSSSVVLRN 835



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI-HLEG-TA 740
           LV   +   ++L +L +       L  +++S     +E P+   SR   LE+  L+G T 
Sbjct: 663 LVHFCMPRSRHLTQLWKGQKVFGNLEFVDVSYSQYLKETPDF--SRATNLEVLVLKGCTN 720

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           +R +  S+  LS  IL NL++C NL+ LPS I  L SL  +  SGCSKL+ + E 
Sbjct: 721 LRKVHPSLGYLSKLILLNLENCTNLEHLPS-IRWLVSLETLILSGCSKLEKLPEV 774



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN-LSSLPVTI----SSLKCLRTLE 58
           M  LS L LDGT+IT+     EL    E      C N L+S   TI    SS   LR   
Sbjct: 778 MPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLNELNSDDSTIRQLPSSSVVLRNHN 837

Query: 59  LSGCSKLKKFPQIV--ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            S  S  ++   I    ++  L+ L L GTSI  +P ++E L  L+ L L  C+ L  LP
Sbjct: 838 ASPSSAPRRSHSIRPHCTLTSLTYLNLSGTSIIRLPWNLERLFMLQRLELTNCRRLQALP 897

Query: 117 SSINGLKSLKTLNLSGCCKLENV 139
              +   S++ +N S C  LE V
Sbjct: 898 VLPS---SIERMNASNCTSLELV 917


>gi|297741030|emb|CBI31342.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/227 (42%), Positives = 135/227 (59%), Gaps = 8/227 (3%)

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           A   +L +L L+G  S+ +V SS+  L  L  L L  C+ L  LPSS   LKSL+T  LS
Sbjct: 38  ALFTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILS 97

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
           GC K +  P+  G +E L+EL V   AI    SS   ++NL+ L F GC + P+S  W L
Sbjct: 98  GCSKFKEFPENFGSLEMLKELYVDEIAIGVLPSSFSFLRNLQILSFKGC-KGPSSTLWLL 156

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                   +SS  +  +L  L+G+ SL +L+LS+C L +    S +  L SL+ELYL  N
Sbjct: 157 P------RRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFLSSLEELYLGGN 210

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           +FVTLP++IS L NL  L LE+CKRLQ LP++P ++ ++ A  C+SL
Sbjct: 211 DFVTLPSTISQLSNLTLLGLENCKRLQVLPELPSSIYYICAENCTSL 257



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 101/197 (51%), Gaps = 19/197 (9%)

Query: 2   ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           A   +L  L L+G  S+ +V SS+  L  L  L LK C+ L SLP +   LK L T  LS
Sbjct: 38  ALFTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILS 97

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----NLVRLP 116
           GCSK K+FP+   S+E L +LY+D  +I  +PSS   L  L++L    CK     L  LP
Sbjct: 98  GCSKFKEFPENFGSLEMLKELYVDEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTLWLLP 157

Query: 117 -----------SSINGLKSLKTLNLSGCCKLENVPD--TLGKVESLEELDVSGTAIRRPT 163
                        ++GL+SL  LNLS  C L + P+  +LG + SLEEL + G       
Sbjct: 158 RRSSNSIGSILQPLSGLRSLIRLNLSN-CNLSDEPNLSSLGFLSSLEELYLGGNDFVTLP 216

Query: 164 SSIFLMKNLRSLYFSGC 180
           S+I  + NL  L    C
Sbjct: 217 STISQLSNLTLLGLENC 233



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 18/153 (11%)

Query: 651 WEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           WE    F ++ +++ +G   +R++  ++  L  L+ L L  C+ L+ LP +   LK L T
Sbjct: 36  WEAL--FTNLKRLVLEGCVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLET 93

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK------ 763
             LSG SKF+EFPE   S + L E++++  AI  LP+S   L    + + K CK      
Sbjct: 94  FILSGCSKFKEFPENFGSLEMLKELYVDEIAIGVLPSSFSFLRNLQILSFKGCKGPSSTL 153

Query: 764 ---------NLKSLPSTINGLRSLRMMYPSGCS 787
                    ++ S+   ++GLRSL  +  S C+
Sbjct: 154 WLLPRRSSNSIGSILQPLSGLRSLIRLNLSNCN 186


>gi|296089378|emb|CBI39197.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 212/498 (42%), Gaps = 115/498 (23%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L G T++ +V  S+  L+ L LL L+ C NL  LP +I  L  L TL LSGCSK
Sbjct: 86  NLEVLVLKGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLP-SIRWLVSLETLILSGCSK 144

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+K P++   M  LSKL LDGT+I +                                  
Sbjct: 145 LEKLPEVPQHMPYLSKLCLDGTAITD---------------------------------- 170

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEP 183
                 SG  +L N  +  G ++ L EL+   + IR+ P+SS+ L  +         N  
Sbjct: 171 -----FSGWSELGNFQENSGNLDCLNELNSDDSTIRQLPSSSVVLRNH---------NAS 216

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
           P+SA    H                  S+   C+LT                      SL
Sbjct: 217 PSSAPRRSH------------------SIRPHCTLT----------------------SL 236

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL----- 298
             L L+  + + LP ++  L  L+ LEL +C+RLQ+LP +P +++ + A+ C+SL     
Sbjct: 237 TYLNLSGTSIIRLPWNLERLFMLQRLELTNCRRLQALPVLPSSIERMNASNCTSLELVSP 296

Query: 299 ---VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP--GHKLSIV 353
                 FG   L  + + + NC   ++   ++  +  +   +    A   P  G   S V
Sbjct: 297 QSVFKRFGGF-LFGNCFKLRNCHSKMEHDVQSVASHVVPGAWRSTYASWHPNVGIPFSTV 355

Query: 354 FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
           FPGS+IP WF + ++G  I +  P   Y  +  +GFA+  V      S   Y++     H
Sbjct: 356 FPGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAVMAPQHDSRAWYMYCDLDTH 415

Query: 414 ELE------CSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRS 467
           +L       CS  GS       ++ +   + SDH+WL ++P        + + I+ SF S
Sbjct: 416 DLNSNSHRICSFFGSWT-----YQLQHTPIESDHVWLAYVPSFLSFSCEKWSHIKFSFSS 470

Query: 468 ISDPTWKVKRCGFHPIYM 485
                  VK CGF P+Y+
Sbjct: 471 SGGCV--VKSCGFCPVYI 486



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 7/131 (5%)

Query: 661 VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE 720
           V VL   T++R++  ++  L  L+ L L  C NLE LP +I  L  L TL LSG SK  +
Sbjct: 89  VLVLKGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLP-SIRWLVSLETLILSGCSKLEK 147

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
            PE+      L ++ L+GTAI       EL  GN   N  +   L  L S  + +R L  
Sbjct: 148 LPEVPQHMPYLSKLCLDGTAITDFSGWSEL--GNFQENSGNLDCLNELNSDDSTIRQL-- 203

Query: 781 MYPSGCSKLKN 791
             PS    L+N
Sbjct: 204 --PSSSVVLRN 212



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV   +   ++L +L +       L  +++S     +E P+ + + +  + +    T +R
Sbjct: 40  LVHFCMPRSRHLTQLWKGQKVFGNLEFVDVSYSQYLKETPDFSRATNLEVLVLKGCTNLR 99

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            +  S+  LS  IL NL++C NL+ LPS I  L SL  +  SGCSKL+ + E 
Sbjct: 100 KVHPSLGYLSKLILLNLENCTNLEHLPS-IRWLVSLETLILSGCSKLEKLPEV 151



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN-LSSLPVTI----SSLKCLRTLE 58
           M  LS L LDGT+IT+     EL    E      C N L+S   TI    SS   LR   
Sbjct: 155 MPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLNELNSDDSTIRQLPSSSVVLRNHN 214

Query: 59  LSGCSKLKKFPQIV--ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            S  S  ++   I    ++  L+ L L GTSI  +P ++E L  L+ L L  C+ L  LP
Sbjct: 215 ASPSSAPRRSHSIRPHCTLTSLTYLNLSGTSIIRLPWNLERLFMLQRLELTNCRRLQALP 274

Query: 117 SSINGLKSLKTLNLSGCCKLENV 139
              +   S++ +N S C  LE V
Sbjct: 275 VLPS---SIERMNASNCTSLELV 294


>gi|297791369|ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309404|gb|EFH39828.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1177

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 199/382 (52%), Gaps = 36/382 (9%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + ++ +L +L L G +S+ ++PSSI  LT L+ L L  C +L  LP +I ++  L+ L L
Sbjct: 700  IGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSLVQLPSSIGNVTSLKELNL 759

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            SGCS L + P  + +  +L KLY DG +S+ E+PSS+  +  L  L L  C +L+  PSS
Sbjct: 760  SGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIANLRELQLMNCSSLIEFPSS 819

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
            I  L  LK LNLSGC  L  +P ++G V +L+ L +SG +++     SI    NL++LY 
Sbjct: 820  ILKLTRLKDLNLSGCSSLVKLP-SIGNVINLQTLFLSGCSSLVELPFSIENATNLQTLYL 878

Query: 178  SGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAI 233
            +GC+   E P+S  W++      L  + C     LPSL G   +L  L L +C      +
Sbjct: 879  NGCSDLLELPSSI-WNIT-NLQSLYLNGCSSLKELPSLVGNAINLQSLSLMNCS-SMVEL 935

Query: 234  PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
            PS I N  +L   YL+    V+  +S+ G LN+ +LEL  C++L S P +P +L  + A 
Sbjct: 936  PSSIWNATNLS--YLD----VSSCSSLVG-LNI-KLELNQCRKLVSHPVVPDSL-ILDAG 986

Query: 294  GCSSLVT-LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
             C SLV  L  + +  +      NC    +  R   +  S  R               + 
Sbjct: 987  DCESLVERLDCSFQNPKIVLNFANCFKLNQEARDLIIQTSTCR---------------NA 1031

Query: 353  VFPGSQIPKWFMYQNEGSSITV 374
            + PG ++P +F Y+  G S+TV
Sbjct: 1032 ILPGGKVPAYFTYRATGDSLTV 1053



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 3/147 (2%)

Query: 659 DIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSK 717
           ++ ++ +DG + + EL  ++  +  L +L L  C +L   P +I  L  L  LNLSG S 
Sbjct: 777 NLKKLYADGCSSLVELPSSVGNIANLRELQLMNCSSLIEFPSSILKLTRLKDLNLSGCSS 836

Query: 718 FREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             + P I +  + L  + L G +++  LP SIE  +      L  C +L  LPS+I  + 
Sbjct: 837 LVKLPSIGNVIN-LQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSDLLELPSSIWNIT 895

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           +L+ +Y +GCS LK +   +G   +L+
Sbjct: 896 NLQSLYLNGCSSLKELPSLVGNAINLQ 922



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 9/125 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L L  C +L  LP +I  +  L  L+L G S   + P    +   L +++L   +++
Sbjct: 682 LQELRLVDCLSLVELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSL 741

Query: 742 RGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             LP+SI    GN+ S    NL  C +L  +PS+I    +L+ +Y  GCS L  +  ++G
Sbjct: 742 VQLPSSI----GNVTSLKELNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVG 797

Query: 798 KVESL 802
            + +L
Sbjct: 798 NIANL 802



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 12/124 (9%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           + L+ C NL+ LP   S    L  L L       E P    +   LLE+ L G +++  L
Sbjct: 662 MDLSFCVNLKELP-DFSTATNLQELRLVDCLSLVELPSSIGNVTNLLELDLIGCSSLVKL 720

Query: 745 PASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           P+SI    GN L+NLK      C +L  LPS+I  + SL+ +  SGCS L  +  ++G  
Sbjct: 721 PSSI----GN-LTNLKKLYLNRCSSLVQLPSSIGNVTSLKELNLSGCSSLLEIPSSIGNT 775

Query: 800 ESLE 803
            +L+
Sbjct: 776 TNLK 779



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 26/159 (16%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------IELLFGLVQLTLNGCKNLE 695
           NCS L E    FP  +  L   T +++L+L+          I  +  L  L L+GC +L 
Sbjct: 809 NCSSLIE----FPSSILKL---TRLKDLNLSGCSSLVKLPSIGNVINLQTLFLSGCSSLV 861

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGN 754
            LP +I     L TL L+G S   E P    +   L  ++L G ++++ LP+    L GN
Sbjct: 862 ELPFSIENATNLQTLYLNGCSDLLELPSSIWNITNLQSLYLNGCSSLKELPS----LVGN 917

Query: 755 ILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            ++    +L +C ++  LPS+I    +L  +  S CS L
Sbjct: 918 AINLQSLSLMNCSSMVELPSSIWNATNLSYLDVSSCSSL 956



 Score = 42.7 bits (99), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 14/147 (9%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L L+GC +L  +P +I     L  L   G S   E P    +   L E+ L   +++
Sbjct: 754 LKELNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVELPSSVGNIANLRELQLMNCSSL 813

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL-------KNVT- 793
              P+SI  L+     NL  C +L  LPS I  + +L+ ++ SGCS L       +N T 
Sbjct: 814 IEFPSSILKLTRLKDLNLSGCSSLVKLPS-IGNVINLQTLFLSGCSSLVELPFSIENATN 872

Query: 794 -ETL---GKVESLEVRLSSWNRPKMQN 816
            +TL   G  + LE+  S WN   +Q+
Sbjct: 873 LQTLYLNGCSDLLELPSSIWNITNLQS 899



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 2/111 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLS 752
           LE+L      ++ L  ++LS     +E P+ +++ + L E+ L +  ++  LP+SI  ++
Sbjct: 646 LEKLWEGNEPIRNLKWMDLSFCVNLKELPDFSTATN-LQELRLVDCLSLVELPSSIGNVT 704

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             +  +L  C +L  LPS+I  L +L+ +Y + CS L  +  ++G V SL+
Sbjct: 705 NLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSLVQLPSSIGNVTSLK 755



 Score = 40.4 bits (93), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E      +I  +    L + + + E   +I  L  L  L L+GC +L +LP +I 
Sbjct: 786 CSSLVELPSSVGNIANLRELQLMNCSSLIEFPSSILKLTRLKDLNLSGCSSLVKLP-SIG 844

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKD 761
            +  L TL LSG S   E P    +   L  ++L G + +  LP+SI  ++      L  
Sbjct: 845 NVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSDLLELPSSIWNITNLQSLYLNG 904

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           C +LK LPS +    +L+ +    CS +
Sbjct: 905 CSSLKELPSLVGNAINLQSLSLMNCSSM 932


>gi|357500591|ref|XP_003620584.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495599|gb|AES76802.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1392

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 217/492 (44%), Gaps = 65/492 (13%)

Query: 20   VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
            +PSS      +EL+ +K   N++ L      L  LRTL+LS   +L+K         +L 
Sbjct: 594  LPSSFHPNELVELILVKS--NITQLWKNKKYLPNLRTLDLSHSIELEKIIDF-GEFPNLE 650

Query: 80   KLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
             L L+G T++ E+  SI LL  L  L L  C NLV +P++I GL SL+ LN+S C K+ N
Sbjct: 651  WLNLEGCTNLVELDPSIGLLRNLVYLNLENCYNLVSIPNTIFGLGSLEDLNISCCSKVFN 710

Query: 139  VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA----SWHLHLP 194
             P                         I L KN +  Y +       S      W + LP
Sbjct: 711  KP-------------------------IHLEKNKKRHYITESASHSRSTSSVFEWTM-LP 744

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
             +    +      +LPSL  +  L  +D+S C L +  +P  I+ LH L+ L L  N+FV
Sbjct: 745  HHSSFSAPTTHTSLLPSLRSLHCLRNVDISFCYLRQ--VPGTIECLHWLERLNLGGNDFV 802

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
            TLP S+  L  L  L LE C+ L+SLPQ+P      R +         G +        I
Sbjct: 803  TLP-SLRKLSKLVYLNLEHCRLLESLPQLPSPTSIGRDHREKEYKLNTGLV--------I 853

Query: 315  INCIDSLKLLRKNGLAISMLREYLELQAVSDPGH--KLSIVFPGSQIPKWFMYQNEGSSI 372
             NC    +  R + +  S   ++++    S P +  +  IV PG++IP W   Q+ G SI
Sbjct: 854  FNCPKLGERERCSSMTFSWTTQFIQAYQQSYPTYLDEFQIVSPGNEIPSWINNQSMGDSI 913

Query: 373  TVTRPSYLY-NVNKVVGFAICCVFQV-PKHSTGTYLFHSYPAHELECSMDGSGEGHYIYF 430
             V +   ++ N N ++GF  C VF + P   +       Y        M+  G    I+ 
Sbjct: 914  PVDQTPIMHDNNNNIIGFLCCVVFSMTPSRRSNIDPRSIY--------MEIGGTRKRIWL 965

Query: 431  RGKFGHVVSD--------HLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHP 482
              +   + +D        HLWL++LPR  ++       +   F        +VK CG+H 
Sbjct: 966  PVRVAGMFTDDLITMKSSHLWLIYLPRESYHKFAGIKRVAGMFLGNKLSGMEVKSCGYHW 1025

Query: 483  IYMHEVEEFDET 494
            +   +++EF+ T
Sbjct: 1026 VCKQDLQEFNLT 1037



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 9/101 (8%)

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIEL 750
           KN + LP  +  L    ++ L  +  F EFP        L  ++LEG T +  L  SI L
Sbjct: 618 KNKKYLP-NLRTLDLSHSIELEKIIDFGEFP-------NLEWLNLEGCTNLVELDPSIGL 669

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           L   +  NL++C NL S+P+TI GL SL  +  S CSK+ N
Sbjct: 670 LRNLVYLNLENCYNLVSIPNTIFGLGSLEDLNISCCSKVFN 710



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 10  LYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L L+G T++ E+  SI LL  L  L L+ C NL S+P TI  L  L  L +S CSK+   
Sbjct: 652 LNLEGCTNLVELDPSIGLLRNLVYLNLENCYNLVSIPNTIFGLGSLEDLNISCCSKVFNK 711

Query: 69  P 69
           P
Sbjct: 712 P 712


>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
          Length = 1224

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 231/536 (43%), Gaps = 80/536 (14%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L +L L G +S+ E+PSSI  LT L+ L LK C +L  LP +I ++  L  L L
Sbjct: 709  LSTATNLRELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNL 768

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            SGCS L + P  +++M +L    L   +S+  +  SI  +  L+ L LNEC +LV L  +
Sbjct: 769  SGCSSLVELPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNECSSLVEL--T 826

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
               + +LK L+ + C  L  +  ++G + +L  LD++G +++     SI  M NL +L  
Sbjct: 827  FGNMTNLKNLDPNRCSSLVEISSSIGNMTNLVRLDLTGCSSLVELPYSIGNMTNLETLEL 886

Query: 178  SGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC-------- 226
            SGC+   E P+S   +LH     L   +C   + LP    + SL  LDLS C        
Sbjct: 887  SGCSSLVELPSSIG-NLH-NLKRLNLRNCSTLMALPVNINMKSLDFLDLSYCSVLKSFPE 944

Query: 227  -----------GLGEAAIPSDI--------------DNLHS-------LKELYLNRNNFV 254
                       G     IP+ I              +NL         +  L+L+     
Sbjct: 945  ISTNIIFLGIKGTAIEEIPTSIRSWSRLDTLDMSYSENLRKSHHAFDLITNLHLSDTGIQ 1004

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG-ALKLCRSKYT 313
             +   +  +  L EL +  C +L SLPQ+P +L+F+    C SL  L        R+K T
Sbjct: 1005 EISPWVKEMSRLRELVINGCTKLVSLPQLPDSLEFMHVENCESLERLDSLDCSFYRTKLT 1064

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
             +  ++ LKL R+   A+ ++ +            K+  +FPG  +P +F Y+  GSS++
Sbjct: 1065 DLRFVNCLKLNRE---AVDLILK---------TSTKIWAIFPGESVPAYFSYRATGSSVS 1112

Query: 374  VTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGK 433
            +    +       + F  C +                PA      M     G     R  
Sbjct: 1113 MKLNRFDTRFPTSLRFKACILLVTNPDDVE-------PAAWYRSDMSYCINGK---LRDA 1162

Query: 434  FGHVVSDHLWLLFLPRHGH--NWQFESNL----IRLSFRSISDPTWKVKRCGFHPI 483
               +   H+W    PR  H    +FE  +    +   FR      W++K CG  P+
Sbjct: 1163 GVFLAYTHIWDPLRPRSEHLVVIEFEETVTSPELVFEFR-FEKENWEIKECGLRPL 1217



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 160/309 (51%), Gaps = 36/309 (11%)

Query: 17  ITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +T +PS    ELL  ++++    C NL  L     +++ L+ ++LS    LK+ P + ++
Sbjct: 657 MTCLPSDFNPELLMEIKMI----CSNLEKLWEGNKTIRNLKWMDLSHSKNLKELPNL-ST 711

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             +L +L L G +S+ E+PSSI  L  L+ L L  C +L+ LPSSI  + +L+ LNLSGC
Sbjct: 712 ATNLRELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGC 771

Query: 134 CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC------------ 180
             L  +P ++  + +LE  ++S  +++ R + SI  M NL+ L  + C            
Sbjct: 772 SSLVELPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNECSSLVELTFGNMT 831

Query: 181 ---NEPPASASWHLHLPFNL--------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGL 228
              N  P   S  + +  ++        L  + C   + LP S+  + +L  L+LS C  
Sbjct: 832 NLKNLDPNRCSSLVEISSSIGNMTNLVRLDLTGCSSLVELPYSIGNMTNLETLELSGCS- 890

Query: 229 GEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
               +PS I NLH+LK L L N +  + LP +I+ + +L+ L+L  C  L+S P+I  N+
Sbjct: 891 SLVELPSSIGNLHNLKRLNLRNCSTLMALPVNIN-MKSLDFLDLSYCSVLKSFPEISTNI 949

Query: 288 QFVRANGCS 296
            F+   G +
Sbjct: 950 IFLGIKGTA 958



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 27/188 (14%)

Query: 664 LSDGTDIRELSLA-----IELLFG----LVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           + + T+++EL L      +EL FG    L  L  N C +L  +  +I  +  L  L+L+G
Sbjct: 805 IGNMTNLKELELNECSSLVELTFGNMTNLKNLDPNRCSSLVEISSSIGNMTNLVRLDLTG 864

Query: 715 LSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
            S   E P    +   L  + L G +++  LP+SI  L      NL++C  L +LP  IN
Sbjct: 865 CSSLVELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNCSTLMALPVNIN 924

Query: 774 GLRSLRMMYPSGCSKLKNVTET------LG----KVESLEVRLSSWNRPKMQNDFDCVEQ 823
            ++SL  +  S CS LK+  E       LG     +E +   + SW+R       D ++ 
Sbjct: 925 -MKSLDFLDLSYCSVLKSFPEISTNIIFLGIKGTAIEEIPTSIRSWSR------LDTLDM 977

Query: 824 SAVETVTK 831
           S  E + K
Sbjct: 978 SYSENLRK 985



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 64/114 (56%), Gaps = 2/114 (1%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIE 749
           C NLE+L      ++ L  ++LS     +E P ++++ + L E++L G +++  LP+SI 
Sbjct: 676 CSNLEKLWEGNKTIRNLKWMDLSHSKNLKELPNLSTATN-LRELNLFGCSSLMELPSSIG 734

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            L+     NLK C +L  LPS+I  + +L  +  SGCS L  +  ++  + +LE
Sbjct: 735 NLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSLVELPSSISNMTNLE 788



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 29/205 (14%)

Query: 615 VKMISVDSGCMSCYKKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL 673
           +KMI     C +  K W G +T+R     +  +   L     E P+    LS  T++REL
Sbjct: 672 IKMI-----CSNLEKLWEGNKTIRNLKWMDLSHSKNL----KELPN----LSTATNLREL 718

Query: 674 SL-----------AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L           +I  L  L +L L  C +L  LP +I  +  L  LNLSG S   E P
Sbjct: 719 NLFGCSSLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSLVELP 778

Query: 723 EITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
              S+   L   +L + +++  L  SI  ++      L +C +L  L  T   + +L+ +
Sbjct: 779 SSISNMTNLENFNLSQCSSVVRLSFSIGNMTNLKELELNECSSLVEL--TFGNMTNLKNL 836

Query: 782 YPSGCSKLKNVTETLGKVESLEVRL 806
            P+ CS L  ++ ++G + +L VRL
Sbjct: 837 DPNRCSSLVEISSSIGNMTNL-VRL 860


>gi|297734812|emb|CBI17046.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/177 (46%), Positives = 109/177 (61%), Gaps = 6/177 (3%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G +I E+P+ IE    L+ L L+ CKNL  LP +I  LK L TL  SGCS+L+ FP
Sbjct: 301 LCLKGNAINELPT-IECPLELDSLCLRECKNLEHLPSSICELKSLTTLFCSGCSRLRSFP 359

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           +IV  +E+L  L+LDGT+I E+P+SI+ L GL+ L L++C NLV LP SI  L SLKTL+
Sbjct: 360 EIVEDVENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCTNLVSLPESICNLSSLKTLD 419

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS-----IFLMKNLRSLYFSGCN 181
           +S C KLE  P+ L  ++ LE+L  SG  +     S     I  +  LR L  S C 
Sbjct: 420 VSFCTKLEKFPENLRSLQCLEDLRASGLNLSMDCFSSILAGIIQLSKLRVLQLSHCQ 476



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 95/174 (54%), Gaps = 8/174 (4%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G  I EL   IE    L  L L  CKNLE LP +I  LK L+TL  SG S+ R FPEI  
Sbjct: 305 GNAINELP-TIECPLELDSLCLRECKNLEHLPSSICELKSLTTLFCSGCSRLRSFPEIVE 363

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
             + L  +HL+GTAI  LPASI+ L G    NL DC NL SLP +I  L SL+ +  S C
Sbjct: 364 DVENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCTNLVSLPESICNLSSLKTLDVSFC 423

Query: 787 SKLKNVTETLGKVESLE-VRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLR 839
           +KL+   E L  ++ LE +R S  N        DC   S +  + +L+K  +L+
Sbjct: 424 TKLEKFPENLRSLQCLEDLRASGLNL-----SMDCF-SSILAGIIQLSKLRVLQ 471



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 31/227 (13%)

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           KL L G +I E+P+ IE    L+ L L ECKNL  LPSSI  LKSL TL  SGC +L + 
Sbjct: 300 KLCLKGNAINELPT-IECPLELDSLCLRECKNLEHLPSSICELKSLTTLFCSGCSRLRSF 358

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
           P+ +  VE+L  L + GTAI    +SI  ++ L+ L  S C               NL+ 
Sbjct: 359 PEIVEDVENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCT--------------NLVS 404

Query: 200 KSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY-----LNRNNF 253
                    LP S+  + SL  LD+S C   E   P ++ +L  L++L      L+ + F
Sbjct: 405 ---------LPESICNLSSLKTLDVSFCTKLEK-FPENLRSLQCLEDLRASGLNLSMDCF 454

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            ++ A I  L  L  L+L  C+  + +P++ P+L+++  + C+ L T
Sbjct: 455 SSILAGIIQLSKLRVLQLSHCQGRRQVPELRPSLRYLDVHSCTCLET 501



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 24/292 (8%)

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            ++L  + G+ SL  LDLS C + E  IP++   L SL+EL L  N F ++PA I+ L  
Sbjct: 3   GVVLSDICGLYSLQVLDLSVCCIDEGGIPTEFCQLSSLQELLLIGNPFRSIPAGINQLSR 62

Query: 266 LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
           L  L+L  C+ L+ +P +P +L+ +  +GC  L T  G L       ++ NC  SL    
Sbjct: 63  LRLLDLGYCEELRQIPALPSSLRVLDVHGCKRLETSSGLL-----WSSLFNCFKSL---- 113

Query: 326 KNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNK 385
                I  L    E+        +++++  GS IP W  +  +G+ +    P   Y  + 
Sbjct: 114 -----IQDLE--CEIYPTEKSFAQVNLISDGSGIPNWISHHKKGAEVVAKLPQNWYKNDD 166

Query: 386 VVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYI---YFRGKFGHVVSDHL 442
           ++GF + CV+    + +   L +     E   ++ G  E  ++    F   F   V   +
Sbjct: 167 LLGFVLYCVYYPLDNESEETLDNDATYFEYGLTLRGR-EIQFVDELQFFPSFQCYVVPQM 225

Query: 443 WLLFLPRHGHNWQFESNLIR---LSFRS-ISDPTWKVKRCGFHPIYMHEVEE 490
           W+++ P+     ++ SN  R    SF   +     KV+ CG H IY H+ E+
Sbjct: 226 WMIYYPKLLIEKKYHSNKCRELTASFCGYLRGKAVKVEECGIHLIYAHDHEQ 277



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 85/142 (59%), Gaps = 8/142 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L+LDGT+I E+P+SI+ L GL+ L L  C NL SLP +I +L  L+TL++S
Sbjct: 362 VEDVENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCTNLVSLPESICNLSSLKTLDVS 421

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSI-----AEVPSSIELLPGLELLYLNECKNLVRL 115
            C+KL+KFP+ + S++ L  L   G ++     + + + I  L  L +L L+ C+   ++
Sbjct: 422 FCTKLEKFPENLRSLQCLEDLRASGLNLSMDCFSSILAGIIQLSKLRVLQLSHCQGRRQV 481

Query: 116 PSSINGLKSLKTLNLSGCCKLE 137
           P       SL+ L++  C  LE
Sbjct: 482 PEL---RPSLRYLDVHSCTCLE 500



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CSRL      FP+IV+ +        DGT I EL  +I+ L GL  L L+ C NL  LP 
Sbjct: 352 CSRL----RSFPEIVEDVENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCTNLVSLPE 407

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-----TAIRGLPASIELLSGN 754
           +I  L  L TL++S  +K  +FPE   S   L ++   G          + A I  LS  
Sbjct: 408 SICNLSSLKTLDVSFCTKLEKFPENLRSLQCLEDLRASGLNLSMDCFSSILAGIIQLSKL 467

Query: 755 ILSNLKDCKNLKSLPSTINGLRSL 778
            +  L  C+  + +P     LR L
Sbjct: 468 RVLQLSHCQGRRQVPELRPSLRYL 491



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           SLT L  S C    +  P  ++++ +L+ L+L+      LPASI  L  L+ L L DC  
Sbjct: 343 SLTTLFCSGCSRLRS-FPEIVEDVENLRVLHLDGTAIEELPASIQYLRGLQYLNLSDCTN 401

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISM 333
           L SLP+   NL  ++    S    L    +  RS       +  L+ LR +GL +SM
Sbjct: 402 LVSLPESICNLSSLKTLDVSFCTKLEKFPENLRS-------LQCLEDLRASGLNLSM 451


>gi|224284598|gb|ACN40032.1| unknown [Picea sitchensis]
          Length = 1071

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 160/312 (51%), Gaps = 15/312 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K L  + L   S+T +P S+  LTGL+ L L GC  L  LP ++ +L  L+ L+LS
Sbjct: 658 IGTLKYLEKIVLYNGSMTLLPDSVGHLTGLQTLDLIGCSTLQMLPDSVGNLTGLQKLDLS 717

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            CS L+  P  V ++  L  L L   +++  +P S+  L GL+ L L EC  L  LP S+
Sbjct: 718 WCSTLQMLPDSVGNLTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDLIECSTLQTLPDSV 777

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
             L  L+TL LS C  L+ +PD++G +  L+ L +SG + ++    S+  +  L++LY S
Sbjct: 778 GNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLYLS 837

Query: 179 GCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAI 233
           GC+     P +  +       NL     C     LP L G + SL  LDL  C   +  +
Sbjct: 838 GCSTLQTLPDSVGNLTGLQTLNL---DRCSTLQTLPDLVGNLKSLQTLDLDGCSTLQ-TL 893

Query: 234 PSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQF 289
           P  + NL  L+ L L+  +   TLP S   L  L+ L L  C  LQ+LP    N   LQ 
Sbjct: 894 PDSVGNLTGLQTLNLSGCSTLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDSFGNLTGLQT 953

Query: 290 VRANGCSSLVTL 301
           +   GCS+L TL
Sbjct: 954 LNLIGCSTLQTL 965



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 155/306 (50%), Gaps = 22/306 (7%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +++  +P S+  LTGL+ L L  C  L +LP ++ +L  L+TL LS CS L+  P  V +
Sbjct: 744  STLQTLPDSVGNLTGLQTLDLIECSTLQTLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGN 803

Query: 75   MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            +  L  LYL G +++  +P S+  L GL+ LYL+ C  L  LP S+  L  L+TLNL  C
Sbjct: 804  LTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRC 863

Query: 134  CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASAS 188
              L+ +PD +G ++SL+ LD+ G + ++    S+  +  L++L  SGC+     P +  +
Sbjct: 864  STLQTLPDLVGNLKSLQTLDLDGCSTLQTLPDSVGNLTGLQTLNLSGCSTLQTLPDSFGN 923

Query: 189  WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                   NL+G   C     LP S   +  L  L+L  C   +  +P  + NL  L+ LY
Sbjct: 924  LTGLQTLNLIG---CSTLQTLPDSFGNLTGLQTLNLIGCSTLQ-TLPDSVGNLTGLQILY 979

Query: 248  LNR----NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
            L          TLP  +  L  L+ L L+    LQ LP    NL  ++       +TL G
Sbjct: 980  LGGCFTLQTLQTLPDLVGTLTGLQTLYLDGYSTLQMLPDSIWNLMGLKR------LTLAG 1033

Query: 304  ALKLCR 309
            A  LCR
Sbjct: 1034 A-TLCR 1038



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 8/255 (3%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           L+  EL   + L K P+ + +++ L K+ L   S+  +P S+  L GL+ L L  C  L 
Sbjct: 640 LQLRELYVNAPLSKVPESIGTLKYLEKIVLYNGSMTLLPDSVGHLTGLQTLDLIGCSTLQ 699

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNL 172
            LP S+  L  L+ L+LS C  L+ +PD++G +  L+ L +   + ++    S+  +  L
Sbjct: 700 MLPDSVGNLTGLQKLDLSWCSTLQMLPDSVGNLTGLQTLALGWCSTLQTLPDSVGNLTGL 759

Query: 173 RSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGE 230
           ++L    C+          +L     L  S C     LP   G +  L  L LS C   +
Sbjct: 760 QTLDLIECSTLQTLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQ 819

Query: 231 AAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN--- 286
             +P  + NL  L+ LYL+  +   TLP S+  L  L+ L L+ C  LQ+LP +  N   
Sbjct: 820 -TLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKS 878

Query: 287 LQFVRANGCSSLVTL 301
           LQ +  +GCS+L TL
Sbjct: 879 LQTLDLDGCSTLQTL 893



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + ++ L  ++  L GL  L L+GC  L+ LP ++  L  L TLNL   S  +  P+
Sbjct: 812 LSGCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPD 871

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +  +   L  + L+G + ++ LP S+  L+G    NL  C  L++LP +   L  L+ + 
Sbjct: 872 LVGNLKSLQTLDLDGCSTLQTLPDSVGNLTGLQTLNLSGCSTLQTLPDSFGNLTGLQTLN 931

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
             GCS L+ + ++ G +  L+ 
Sbjct: 932 LIGCSTLQTLPDSFGNLTGLQT 953



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L GL  L L+ C  L+ LP ++  L  L TL LSG S  +  P+   +   L  ++L G 
Sbjct: 780 LTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLYLSGC 839

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + ++ LP S+  L+G    NL  C  L++LP  +  L+SL+ +   GCS L+ + +++G 
Sbjct: 840 STLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKSLQTLDLDGCSTLQTLPDSVGN 899

Query: 799 VESLEV 804
           +  L+ 
Sbjct: 900 LTGLQT 905



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + ++ L  ++  L GL  L L+ C  L+ LP  +  LK L TL+L G S  +  P+
Sbjct: 836 LSGCSTLQTLPDSVGNLTGLQTLNLDRCSTLQTLPDLVGNLKSLQTLDLDGCSTLQTLPD 895

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  ++L G + ++ LP S   L+G    NL  C  L++LP +   L  L+ + 
Sbjct: 896 SVGNLTGLQTLNLSGCSTLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDSFGNLTGLQTLN 955

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
             GCS L+ + +++G +  L++
Sbjct: 956 LIGCSTLQTLPDSVGNLTGLQI 977



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 1/114 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L  L L+GC  L+ LP ++  L  L TLNLSG S  +  P+   +   L  ++L G 
Sbjct: 876 LKSLQTLDLDGCSTLQTLPDSVGNLTGLQTLNLSGCSTLQTLPDSFGNLTGLQTLNLIGC 935

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           + ++ LP S   L+G    NL  C  L++LP ++  L  L+++Y  GC  L+ +
Sbjct: 936 STLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDSVGNLTGLQILYLGGCFTLQTL 989



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L GL +L L+ C  L+ LP ++  L  L TL L   S  +  P+   +   L  + L E 
Sbjct: 708 LTGLQKLDLSWCSTLQMLPDSVGNLTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDLIEC 767

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + ++ LP S+  L+G     L  C  L++LP ++  L  L+ +Y SGCS L+ + +++G 
Sbjct: 768 STLQTLPDSVGNLTGLQTLYLSRCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGN 827

Query: 799 VESLEV 804
           +  L+ 
Sbjct: 828 LTGLQT 833



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L GL  L L  C  L+ LP ++  L  L TL+L   S  +  P+   +   L  ++L   
Sbjct: 732 LTGLQTLALGWCSTLQTLPDSVGNLTGLQTLDLIECSTLQTLPDSVGNLTGLQTLYLSRC 791

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + ++ LP S+  L+G     L  C  L++LP ++  L  L+ +Y SGCS L+ + +++G 
Sbjct: 792 STLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGNLTGLQTLYLSGCSTLQTLPDSVGN 851

Query: 799 VESLEV 804
           +  L+ 
Sbjct: 852 LTGLQT 857



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 4/112 (3%)

Query: 680  LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
            L GL  L L GC  L+ LP +   L  L TLNL G S  +  P+   +   L  ++L G 
Sbjct: 924  LTGLQTLNLIGCSTLQTLPDSFGNLTGLQTLNLIGCSTLQTLPDSVGNLTGLQILYLGGC 983

Query: 739  ---TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                 ++ LP  +  L+G     L     L+ LP +I  L  L+ +  +G +
Sbjct: 984  FTLQTLQTLPDLVGTLTGLQTLYLDGYSTLQMLPDSIWNLMGLKRLTLAGAT 1035


>gi|51477386|gb|AAU04759.1| MRGH11 [Cucumis melo]
          Length = 1001

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/281 (39%), Positives = 151/281 (53%), Gaps = 17/281 (6%)

Query: 19  EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
           E+  SI  L  L LL L+GC +L   P  I   K L+TL+LSG + L+ FP+I   ME L
Sbjct: 673 EIHPSINSLNKLILLDLEGCGDLKHFPANIRC-KNLQTLKLSG-TGLEIFPEI-GHMEHL 729

Query: 79  SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
           + L+LDG+ I  +  SI  L GL  L L+ C  L  LP  I  LKSLKTL L  C +L+ 
Sbjct: 730 THLHLDGSKITHLHPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLLLKYCKRLDK 789

Query: 139 VPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL 197
           +P +L   ESLE L +S T+I   P+S I  +KNL +L    C E  +   W   LP   
Sbjct: 790 IPPSLANAESLETLSISETSITHVPSSIIHCLKNLETL---DCEE-LSRGIWKSLLP--- 842

Query: 198 LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
                  + +     TG+  L  L+L  C L +  IP D+    SL+ L L+ NNF TLP
Sbjct: 843 ------QLNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLP 896

Query: 258 ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            S+S L  L+ L L  C  L+ LP++P +LQ+V    C S+
Sbjct: 897 DSLSHLKKLKTLILNYCTELKDLPKLPESLQYVGGVDCRSM 937



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 105/196 (53%), Gaps = 17/196 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+ L+ L+LDG+ IT +  SI  LTGL  L L  C  LSSLP  I +LK L+TL L 
Sbjct: 723 IGHMEHLTHLHLDGSKITHLHPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLLLK 782

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSS-IELLPGLELLYLNECKNLVR----- 114
            C +L K P  +A+ E L  L +  TSI  VPSS I  L  LE L   +C+ L R     
Sbjct: 783 YCKRLDKIPPSLANAESLETLSISETSITHVPSSIIHCLKNLETL---DCEELSRGIWKS 839

Query: 115 -LPS-SIN-----GLKSLKTLNLSGCCKL-ENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
            LP  +IN     GL  LK LNL GC  + E++P+ L    SLE LD+S         S+
Sbjct: 840 LLPQLNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPDSL 899

Query: 167 FLMKNLRSLYFSGCNE 182
             +K L++L  + C E
Sbjct: 900 SHLKKLKTLILNYCTE 915



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL +   + E+  +I  L  L+ L L GC +L+  P  I   K L TL LSG +    FP
Sbjct: 664 VLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANIRC-KNLQTLKLSG-TGLEIFP 721

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L  +HL+G+ I  L  SI  L+G +  +L  C  L SLP  I  L+SL+ + 
Sbjct: 722 EI-GHMEHLTHLHLDGSKITHLHPSIGYLTGLVFLDLSTCLGLSSLPFEIGNLKSLKTLL 780

Query: 783 PSGCSKLKNVTETLGKVESLE 803
              C +L  +  +L   ESLE
Sbjct: 781 LKYCKRLDKIPPSLANAESLE 801



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 106/255 (41%), Gaps = 54/255 (21%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE L L  C  L  +  SIN L  L  L+L GC  L++ P  + + ++L+ L +SGT
Sbjct: 657 VPNLERLVLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANI-RCKNLQTLKLSGT 715

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
            +      I  M++L  L+  G      S   HLH                 PS+  +  
Sbjct: 716 GL-EIFPEIGHMEHLTHLHLDG------SKITHLH-----------------PSIGYLTG 751

Query: 218 LTKLDLSDCGLGEAAIPSDIDNL------------------------HSLKELYLNRNNF 253
           L  LDLS C LG +++P +I NL                         SL+ L ++  + 
Sbjct: 752 LVFLDLSTC-LGLSSLPFEIGNLKSLKTLLLKYCKRLDKIPPSLANAESLETLSISETSI 810

Query: 254 VTLPASISGLL-NLEELELEDCKR---LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             +P+SI   L NLE L+ E+  R      LPQ+  N       GC   + L G   +  
Sbjct: 811 THVPSSIIHCLKNLETLDCEELSRGIWKSLLPQLNINQTITTGLGCLKALNLMGCKLMDE 870

Query: 310 SKYTIINCIDSLKLL 324
                ++C  SL+ L
Sbjct: 871 DIPEDLHCFSSLETL 885



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 39/153 (25%)

Query: 1   MASMKDLSDLYLDGTSITEVPSS-IELLTGLELLTLKGCKNLSS------LP------VT 47
           +A+ + L  L +  TSIT VPSS I  L  LE L    C+ LS       LP        
Sbjct: 794 LANAESLETLSISETSITHVPSSIIHCLKNLETL---DCEELSRGIWKSLLPQLNINQTI 850

Query: 48  ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
            + L CL+ L L GC  + +                      ++P  +     LE L L+
Sbjct: 851 TTGLGCLKALNLMGCKLMDE----------------------DIPEDLHCFSSLETLDLS 888

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
              N   LP S++ LK LKTL L+ C +L+++P
Sbjct: 889 -YNNFTTLPDSLSHLKKLKTLILNYCTELKDLP 920


>gi|224133150|ref|XP_002321495.1| predicted protein [Populus trichocarpa]
 gi|222868491|gb|EEF05622.1| predicted protein [Populus trichocarpa]
          Length = 767

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 203/458 (44%), Gaps = 78/458 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           + ++  L +L L+ +++ E+P S+  L+ LE L+L  C++L++                 
Sbjct: 208 LGNLSSLKELSLNQSAVEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEVSIN 267

Query: 44  ------LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                 LP  I SL  L+ L   GC  L K P  +  +  +S+L LD TSI+ +P  I  
Sbjct: 268 SSAIKELPPAIGSLPYLKILSAGGCRSLSKLPDSIGGLASISELELDETSISHLPEQIGG 327

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC----------------------C- 134
           L  +E LY+ +C +L  LP SI  + SL TLNL GC                      C 
Sbjct: 328 LKMIEKLYMRKCTSLSSLPESIGSMLSLTTLNLFGCNINELPESFGMLENLVMLRLHQCR 387

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+ +P ++GK++SL  L +  TA+     S   + NL  L      EP  S S    L 
Sbjct: 388 KLQKLPVSIGKLKSLCHLLMEKTAVTVLPESFGKLSNLMILKMG--KEPLESPSTQEQL- 444

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                       ++LPS     SL K   +        IP D + L SL+ + L  NNF 
Sbjct: 445 ------------VVLPSSFFELSLLKELNARAWRISGKIPDDFEKLSSLEMVDLGHNNFS 492

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-----FGALKL-- 307
           +LP+S+ GL  L +L L  C+ L+SLP +P +L  V  + C +L T+      G+L L  
Sbjct: 493 SLPSSLCGLSLLRKLHLPHCEELESLPPLPSSLVEVDVSNCFALETMSDVSNLGSLTLLN 552

Query: 308 ---CRSKYTI--INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKW 362
              C     I  I C+ SLK L  +      L+    L  V     + ++  PGS+IP W
Sbjct: 553 MTNCEKVVDIPGIECLKSLKRLYMSNCKACSLKVKRRLSKVCLRNIR-NLSMPGSKIPDW 611

Query: 363 FMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
           F    E    +  R   +  V  ++G  +    Q+P+ 
Sbjct: 612 F--SQEDVKFSERRNREIKAV--IIGVVVSLDRQIPEQ 645



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 167/325 (51%), Gaps = 25/325 (7%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  K L  L L G   +T+V  S+     L  L L  C NL   P  +S LK L+ L L
Sbjct: 89  LSGCKTLEKLNLQGCVRLTKVHKSVGNARTLLQLNLNDCSNLVEFPSDVSGLKVLQNLNL 148

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S C  LK  PQ + SM  L +L +D T+I+ +P SI  L  LE L LN C+ + RLP  +
Sbjct: 149 SNCPNLKDLPQEIGSMYSLKQLLVDKTAISVLPESIFRLTKLEKLSLNGCQFIKRLPKHL 208

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV----SGTAIRRPTSSIFLMKNLRSL 175
             L SLK L+L+    +E +PD++G + +LE+L +    S TAI     ++ L+  + S+
Sbjct: 209 GNLSSLKELSLNQSA-VEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNLQLLTEV-SI 266

Query: 176 YFSGCNE-PPASASWHLHLPF-NLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAA 232
             S   E PPA  S    LP+  +L    C     LP S+ G+ S+++L+L +  +  + 
Sbjct: 267 NSSAIKELPPAIGS----LPYLKILSAGGCRSLSKLPDSIGGLASISELELDETSI--SH 320

Query: 233 IPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQ 288
           +P  I  L  +++LY+ +  +  +LP SI  +L+L  L L  C  +  LP+   +  NL 
Sbjct: 321 LPEQIGGLKMIEKLYMRKCTSLSSLPESIGSMLSLTTLNLFGC-NINELPESFGMLENLV 379

Query: 289 FVRANGCSSLVTL---FGALK-LCR 309
            +R + C  L  L    G LK LC 
Sbjct: 380 MLRLHQCRKLQKLPVSIGKLKSLCH 404



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL LN C NL   P  +S LK L  LNLS     ++ P+   S   L ++ ++ TAI 
Sbjct: 119 LLQLNLNDCSNLVEFPSDVSGLKVLQNLNLSNCPNLKDLPQEIGSMYSLKQLLVDKTAIS 178

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L+     +L  C+ +K LP  +  L SL+ +  +  S ++ + +++G + +L
Sbjct: 179 VLPESIFRLTKLEKLSLNGCQFIKRLPKHLGNLSSLKELSLNQ-SAVEELPDSVGSLSNL 237

Query: 803 E 803
           E
Sbjct: 238 E 238



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 32/196 (16%)

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN 181
           K+L  ++L GC  L   PD  G  ++LE+L++ G   + +   S+   + L  L  + C+
Sbjct: 70  KNLMVMDLHGCYNLVACPDLSG-CKTLEKLNLQGCVRLTKVHKSVGNARTLLQLNLNDCS 128

Query: 182 ---EPPASASWHLHLPFNLLGKSSCP------------------------VALMLPSLTG 214
              E P+  S  L +  N L  S+CP                        ++++  S+  
Sbjct: 129 NLVEFPSDVSG-LKVLQN-LNLSNCPNLKDLPQEIGSMYSLKQLLVDKTAISVLPESIFR 186

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           +  L KL L+ C   +  +P  + NL SLKEL LN++    LP S+  L NLE+L L  C
Sbjct: 187 LTKLEKLSLNGCQFIK-RLPKHLGNLSSLKELSLNQSAVEELPDSVGSLSNLEKLSLMWC 245

Query: 275 KRLQSLPQIPPNLQFV 290
           + L ++P+   NLQ +
Sbjct: 246 QSLTAIPESVGNLQLL 261



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 9/161 (5%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N   L +E      + Q+L D T I  L  +I  L  L +L+LNGC+ ++RLP+ +  L 
Sbjct: 153 NLKDLPQEIGSMYSLKQLLVDKTAISVLPESIFRLTKLEKLSLNGCQFIKRLPKHLGNLS 212

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGN--ILSNLK-D 761
            L  L+L+  S   E P+   S   L ++ L    ++  +P S+    GN  +L+ +  +
Sbjct: 213 SLKELSLNQ-SAVEELPDSVGSLSNLEKLSLMWCQSLTAIPESV----GNLQLLTEVSIN 267

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
              +K LP  I  L  L+++   GC  L  + +++G + S+
Sbjct: 268 SSAIKELPPAIGSLPYLKILSAGGCRSLSKLPDSIGGLASI 308



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 43/232 (18%)

Query: 613 QFVKMISVDSGCMSCYKKWG-RQTVRRQSPQEPGNCSRL------W--------EEADEF 657
           QF+K +    G +S  K+    Q+   + P   G+ S L      W        E     
Sbjct: 199 QFIKRLPKHLGNLSSLKELSLNQSAVEELPDSVGSLSNLEKLSLMWCQSLTAIPESVGNL 258

Query: 658 PDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLS---- 713
             + +V  + + I+EL  AI  L  L  L+  GC++L +LP +I  L  +S L L     
Sbjct: 259 QLLTEVSINSSAIKELPPAIGSLPYLKILSAGGCRSLSKLPDSIGGLASISELELDETSI 318

Query: 714 --------GL-----------SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGN 754
                   GL           +     PE   S   L  ++L G  I  LP S  +L   
Sbjct: 319 SHLPEQIGGLKMIEKLYMRKCTSLSSLPESIGSMLSLTTLNLFGCNINELPESFGMLENL 378

Query: 755 ILSNLKDCKNLKSLPSTINGLRSL--RMMYPSGCSKLKNVTETLGKVESLEV 804
           ++  L  C+ L+ LP +I  L+SL   +M  +  + L    E+ GK+ +L +
Sbjct: 379 VMLRLHQCRKLQKLPVSIGKLKSLCHLLMEKTAVTVL---PESFGKLSNLMI 427


>gi|359493220|ref|XP_002264441.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1481

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 160/314 (50%), Gaps = 43/314 (13%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           + E+P     +P LE+L L  C+NL  LP  I   K L+TL+   C KL+  P+  G + 
Sbjct: 656 LTEIPD-FSSVPNLEILILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMR 714

Query: 148 SLEELDVSGTAIRR-PTSSIF-LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
            L ELD+SGTAI   P+SS F  +K L+ L F+ C++             N +    C +
Sbjct: 715 KLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSK------------LNKIPIDVCCL 762

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
           +          SL  LDLS C + E  IPSDI  L SLKEL L  N+F ++PA+I+ L  
Sbjct: 763 S----------SLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSR 812

Query: 266 LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
           L+ L L  C+ L+ +P++P +L+ + A+G +  ++    L      ++++NC +S    +
Sbjct: 813 LQVLNLSHCQNLEHVPELPSSLRLLDAHGPNLTLSTASFLPF----HSLVNCFNS----K 864

Query: 326 KNGLAISMLREYLELQAVSDPGHKLSIVFP-GSQIPKWFMYQNEGSSITVTRPSYLYNVN 384
              L+ S           +  G  + IV P  S +P+W M Q   + +    P   Y  N
Sbjct: 865 IQDLSWSSCY----YSDSTYRGKGICIVLPRSSGVPEWIMDQRSETEL----PQNCYQNN 916

Query: 385 KVVGFAICCVFQVP 398
           + +GFAICCV+ VP
Sbjct: 917 EFLGFAICCVY-VP 929



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 114/199 (57%), Gaps = 13/199 (6%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + E+P  IE    L+ L L+ C+NL SLP +I   K L+T   SGCS+L+ FP+I+  
Sbjct: 1097 SDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILED 1155

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ME L KL LDG++I E+PSSI+ L GL+ L L  C+NLV LP SI  L SLKTL ++ C 
Sbjct: 1156 MEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCP 1215

Query: 135  KLENVPDTLGKVESLEEL---DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            +L+ +P+ LG+++SLE L   D      + P+ S F+ +N   ++    N  P    W  
Sbjct: 1216 ELKKLPENLGRLQSLESLHVKDFDSMNCQLPSLSEFVQRNKVGIFLPESNGIP---EWIS 1272

Query: 192  HLPFNLLGKSSCPVALMLP 210
            H       K    + L LP
Sbjct: 1273 H------QKKGSKITLTLP 1285



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 4/167 (2%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +TE+P     +  LE+L LKGC+NL  LP  I   K L+TL    CSKLK+FP+I  +M 
Sbjct: 656 LTEIPD-FSSVPNLEILILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMR 714

Query: 77  DLSKLYLDGTSIAEVP--SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            L +L L GT+I E+P  SS E L  L++L  N C  L ++P  +  L SL+ L+LS C 
Sbjct: 715 KLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCN 774

Query: 135 KLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            +E  +P  + ++ SL+EL++     R   ++I  +  L+ L  S C
Sbjct: 775 IMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHC 821



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 1/136 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D++EL + IE    L  L L  C+NL+ LP +I   K+L T + SG S+   FPEI   
Sbjct: 1097 SDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILED 1155

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             + L ++ L+G+AI+ +P+SI+ L G    NL  C+NL +LP +I  L SL+ +  + C 
Sbjct: 1156 MEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCP 1215

Query: 788  KLKNVTETLGKVESLE 803
            +LK + E LG+++SLE
Sbjct: 1216 ELKKLPENLGRLQSLE 1231



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 13/156 (8%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GC+NLE LPR I   K+L TL+    SK + FPEI  +  +L E+ L GTAI  LP
Sbjct: 671 LILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELP 730

Query: 746 --ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             +S E L    + +   C  L  +P  +  L SL ++  S C    N+ E  G + S  
Sbjct: 731 SSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYC----NIME--GGIPSDI 784

Query: 804 VRLSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELL 838
            RLSS     ++ NDF    +S   T+ +L++ ++L
Sbjct: 785 CRLSSLKELNLKSNDF----RSIPATINQLSRLQVL 816



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 55/83 (66%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L LDG++I E+PSSI+ L GL+ L L  C+NL +LP +I +L  L+TL ++
Sbjct: 1153 LEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTIT 1212

Query: 61   GCSKLKKFPQIVASMEDLSKLYL 83
             C +LKK P+ +  ++ L  L++
Sbjct: 1213 SCPELKKLPENLGRLQSLESLHV 1235



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)

Query: 195  FNLLGKSSCPVALMLPSLTGVCS----LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
            F  L   SC     L S   +      L KL+L    + E  IPS I  L  L++L L  
Sbjct: 1132 FKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKE--IPSSIQRLRGLQDLNLAY 1189

Query: 251  -NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
              N V LP SI  L +L+ L +  C  L+ LP+    LQ + +              L  
Sbjct: 1190 CRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLES--------------LHV 1235

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNE 368
              +  +NC             +  L E+++        +K+ I  P S  IP+W  +Q +
Sbjct: 1236 KDFDSMNC------------QLPSLSEFVQ-------RNKVGIFLPESNGIPEWISHQKK 1276

Query: 369  GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYI 428
            GS IT+T P   Y  +  +GFA+C +  VP     T +     A    C ++      ++
Sbjct: 1277 GSKITLTLPQNWYENDDFLGFALCSL-HVPLDIEWTDI---KEARNFICKLNFDNSASFV 1332

Query: 429  --------YFRGKFGHVVSDHLWLL-----FLPRHGHNWQFESNLIRLSFRS-ISDPTWK 474
                    Y         S+ LWL+      +P+  H+ ++++  +  SF + +   + K
Sbjct: 1333 VRNMQPQRYCESCRDGDESNQLWLINYPKSIIPKRYHSNKYKT--LNASFENYLGTISVK 1390

Query: 475  VKRCGFHPIYMH 486
            V+RCGF  +Y +
Sbjct: 1391 VERCGFQLLYAY 1402



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 2   ASMKDLSDLYLDGTSITEVPSS--IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +M+ L +L L GT+I E+PSS   E L  L++L+   C  L+ +P+ +  L  L  L+L
Sbjct: 711 GNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDL 770

Query: 60  SGCSKLKK-FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C+ ++   P  +  +  L +L L       +P++I  L  L++L L+ C+NL  +P  
Sbjct: 771 SYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLEHVPEL 830

Query: 119 INGLKSL 125
            + L+ L
Sbjct: 831 PSSLRLL 837



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 14/150 (9%)

Query: 645 GNCSRLWEEADEFPDIVQVLS-------DGTDIREL--SLAIELLFGLVQLTLNGCKNLE 695
           G CS+L      FP+I   +         GT I EL  S + E L  L  L+ N C  L 
Sbjct: 698 GECSKL----KRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLN 753

Query: 696 RLPRTISALKYLSTLNLSGLSKFRE-FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGN 754
           ++P  +  L  L  L+LS  +      P        L E++L+    R +PA+I  LS  
Sbjct: 754 KIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRL 813

Query: 755 ILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
            + NL  C+NL+ +P   + LR L    P+
Sbjct: 814 QVLNLSHCQNLEHVPELPSSLRLLDAHGPN 843



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 11/98 (11%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I++ +        DG+ I+E+  +I+ L GL  L L  C+NL  LP 
Sbjct: 1143 CSQL----ESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPE 1198

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE 737
            +I  L  L TL ++   + ++ PE       L  +H++
Sbjct: 1199 SICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHVK 1236


>gi|225448269|ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 139/436 (31%), Positives = 195/436 (44%), Gaps = 86/436 (19%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGC----------KNLSSL-------- 44
            +M+ L  LYL  T+I E+PSSI+L   +E+L L  C           N+ SL        
Sbjct: 854  NMRSLRLLYLCKTAIRELPSSIDL-ESVEILDLSNCFKFEKFSENGANMKSLRQLVLTNT 912

Query: 45   -----PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
                 P  I++ + LRTL+LS CSK +KFP+I  +M  L KL L+ T+I           
Sbjct: 913  AIKELPTGIANWESLRTLDLSKCSKFEKFPEIQGNMTSLKKLLLNNTAIK---------- 962

Query: 100  GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
                           LP SI  LKSL+ LN+S C K EN P+  G ++SL+EL +  TAI
Sbjct: 963  --------------GLPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKSLKELSLKNTAI 1008

Query: 160  RRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGV 215
            +    SI  +++L  L  + C++    P    +        +L  +   +  +  S+  +
Sbjct: 1009 KDLPDSIGDLESLWFLDLTNCSKFEKFPEKGGNMK---SLRVLYLNDTAIKDLPDSIGDL 1065

Query: 216  CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             SL  LDLSDC   E   P    N+ SLK+L L       LP SI  L +L  L+L DC 
Sbjct: 1066 ESLEFLDLSDCSKFEK-FPEKGGNMKSLKKLSLKNTAIKDLPYSIRDLESLWFLDLSDCS 1124

Query: 276  RLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTII----NCIDSLKLLRKNGL-A 330
            + +  P+   N++        SL+ L       R K T I    N I  LK L    L  
Sbjct: 1125 KFEKFPEKGGNMK--------SLMDL-------RLKNTAIKDLPNNISGLKFLETLNLGG 1169

Query: 331  ISMLREYL------ELQAVSDPG---HKLSIVFP-GSQIPKWFMYQNEGSSITVTRPSYL 380
             S L E L       LQ ++ P     KL+ V P  S I +W  Y   GS +T   P   
Sbjct: 1170 CSDLWEGLISNQLCNLQKINIPELKCWKLNAVIPESSGILEWIRYHILGSEVTAKLPMNW 1229

Query: 381  YNVNKVVGFAICCVFQ 396
            Y      GF + CV++
Sbjct: 1230 YEDLDFPGFVVSCVYR 1245



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 53/307 (17%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLK-GCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LY DG  +  +PS+ +   G  L+ L   C N+  L      L+ L+ ++LS  +K
Sbjct: 670 ELRYLYWDGYPLDSLPSNFD---GENLVELHLKCSNIKQLWQGNKYLESLKVIDLSYSTK 726

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L + P+  +S+ +L +L L G                       C +L+ +  SI GLK 
Sbjct: 727 LIQMPEF-SSLSNLERLILKG-----------------------CVSLIDIHPSIGGLKK 762

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-FLMKNLRSLYF--SGCN 181
           L TLNL  C K++ +P ++  +ESL+ LD+S  +     S I   M+ LR  Y   +   
Sbjct: 763 LTTLNLKWCLKIKGLPSSISMLESLQLLDLSKCSSFCKFSEIQGNMRCLREPYLKETATK 822

Query: 182 EPPAS-----ASWHLH-------LPFNLLGKSS--------CPVALM-LPSLTGVCSLTK 220
           + P S     + W L+         F ++ ++         C  A+  LPS   + S+  
Sbjct: 823 DLPTSIGNSRSFWDLYPCGRSNLEKFLVIQQNMRSLRLLYLCKTAIRELPSSIDLESVEI 882

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
           LDLS+C   E     +  N+ SL++L L       LP  I+   +L  L+L  C + +  
Sbjct: 883 LDLSNCFKFE-KFSENGANMKSLRQLVLTNTAIKELPTGIANWESLRTLDLSKCSKFEKF 941

Query: 281 PQIPPNL 287
           P+I  N+
Sbjct: 942 PEIQGNM 948



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 2/121 (1%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            L +L LN    ++ LP +I  LK L  LN+S  SKF  FPE   +   L E+ L+ TAI+
Sbjct: 951  LKKLLLNNTA-IKGLPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKSLKELSLKNTAIK 1009

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             LP SI  L      +L +C   +  P     ++SLR++Y +  + +K++ +++G +ESL
Sbjct: 1010 DLPDSIGDLESLWFLDLTNCSKFEKFPEKGGNMKSLRVLYLNDTA-IKDLPDSIGDLESL 1068

Query: 803  E 803
            E
Sbjct: 1069 E 1069



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 39/236 (16%)

Query: 604  QAKAISQQGQFVKMISVDSGCMSCYKK-WGRQTVRRQSPQEPGNCSRLWE-------EAD 655
            Q   +S+   F K   +  G M C ++ + ++T  +  P   GN    W+         +
Sbjct: 788  QLLDLSKCSSFCKFSEI-QGNMRCLREPYLKETATKDLPTSIGNSRSFWDLYPCGRSNLE 846

Query: 656  EFPDIVQVLSD-------GTDIRELSLAIEL----------LFGLVQLTLNGCK------ 692
            +F  I Q +          T IREL  +I+L           F   + + NG        
Sbjct: 847  KFLVIQQNMRSLRLLYLCKTAIRELPSSIDLESVEILDLSNCFKFEKFSENGANMKSLRQ 906

Query: 693  ------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
                   ++ LP  I+  + L TL+LS  SKF +FPEI  +   L ++ L  TAI+GLP 
Sbjct: 907  LVLTNTAIKELPTGIANWESLRTLDLSKCSKFEKFPEIQGNMTSLKKLLLNNTAIKGLPD 966

Query: 747  SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            SI  L    + N+ DC   ++ P     ++SL+ +     + +K++ +++G +ESL
Sbjct: 967  SIGYLKSLEILNVSDCSKFENFPEKGGNMKSLKELSLKNTA-IKDLPDSIGDLESL 1021



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 23/119 (19%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L  L+LS  SKF +FPE   +   L ++ L+ TAI+ LP SI  L  
Sbjct: 1055 IKDLPDSIGDLESLEFLDLSDCSKFEKFPEKGGNMKSLKKLSLKNTAIKDLPYSIRDLES 1114

Query: 754  NILSNLKDC---------------------KN--LKSLPSTINGLRSLRMMYPSGCSKL 789
                +L DC                     KN  +K LP+ I+GL+ L  +   GCS L
Sbjct: 1115 LWFLDLSDCSKFEKFPEKGGNMKSLMDLRLKNTAIKDLPNNISGLKFLETLNLGGCSDL 1173



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 24/139 (17%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L  L+L+  SKF +FPE   +   L  ++L  TAI+ LP SI  L  
Sbjct: 1008 IKDLPDSIGDLESLWFLDLTNCSKFEKFPEKGGNMKSLRVLYLNDTAIKDLPDSIGDLES 1067

Query: 754  NILSNLKDC---------------------KN--LKSLPSTINGLRSLRMMYPSGCSKLK 790
                +L DC                     KN  +K LP +I  L SL  +  S CSK +
Sbjct: 1068 LEFLDLSDCSKFEKFPEKGGNMKSLKKLSLKNTAIKDLPYSIRDLESLWFLDLSDCSKFE 1127

Query: 791  NVTETLGKVESL-EVRLSS 808
               E  G ++SL ++RL +
Sbjct: 1128 KFPEKGGNMKSLMDLRLKN 1146



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L  C N+++L +    L+ L  ++LS  +K  + PE  SS   L  + L+G  ++
Sbjct: 693 LVELHLK-CSNIKQLWQGNKYLESLKVIDLSYSTKLIQMPEF-SSLSNLERLILKGCVSL 750

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  SI  L      NLK C  +K LPS+I+ L SL+++  S CS     +E  G +  
Sbjct: 751 IDIHPSIGGLKKLTTLNLKWCLKIKGLPSSISMLESLQLLDLSKCSSFCKFSEIQGNMRC 810

Query: 802 L 802
           L
Sbjct: 811 L 811


>gi|37574597|gb|AAQ93075.1| TIR-NBS-LRR type R protein 7 [Malus baccata]
          Length = 1095

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 178/368 (48%), Gaps = 52/368 (14%)

Query: 50  SLKCLRTLELSGCSKLKKFPQI--VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
           SL  L+TL+LS    L+K P    V ++E+L  +  +   ++E+  SI  L  L L+ L 
Sbjct: 640 SLHNLKTLDLSESRSLQKSPDFSQVPNLEEL--ILYNCKELSEIHPSIGHLKRLSLVNLE 697

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
            C  L+ LP      KS++ L L+GC  L  + + +G++ SL  L+   T IR    SI 
Sbjct: 698 WCDKLISLPGDFYKSKSVEALLLNGCLILRELHEDIGEMISLRTLEAEYTDIREVPPSIV 757

Query: 168 LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
            +KNL  L  S            +HLP                SL G+ SL +L+LS   
Sbjct: 758 RLKNLTRLSLSSVES--------IHLPH---------------SLHGLNSLRELNLSSFE 794

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           L +  IP D+ +L SL++L L RN+F TLP S+SGL  LE L L  C++L+++  +P NL
Sbjct: 795 LADDEIPKDLGSLISLQDLNLQRNDFHTLP-SLSGLSKLETLRLHHCEQLRTITDLPTNL 853

Query: 288 QFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
           +F+ ANGC +L T+          ++ ++ I  LK+        + LR+ + LQ  +  G
Sbjct: 854 KFLLANGCPALETM--------PNFSEMSNIRELKVSDSPNNLSTHLRKNI-LQGWTSCG 904

Query: 348 HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
               I    + +P WF + NEG+ +T   P    +     G  + C            ++
Sbjct: 905 FG-GIFLHANYVPDWFEFVNEGTKVTFDIPP--SDGRNFEGLTLFC------------MY 949

Query: 408 HSYPAHEL 415
           HSY + +L
Sbjct: 950 HSYRSRQL 957



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 9/212 (4%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           ++E+  SI  L  L L+ L+ C  L SLP      K +  L L+GC  L++  + +  M 
Sbjct: 678 LSEIHPSIGHLKRLSLVNLEWCDKLISLPGDFYKSKSVEALLLNGCLILRELHEDIGEMI 737

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC-CK 135
            L  L  + T I EVP SI  L  L  L L+  ++ + LP S++GL SL+ LNLS     
Sbjct: 738 SLRTLEAEYTDIREVPPSIVRLKNLTRLSLSSVES-IHLPHSLHGLNSLRELNLSSFELA 796

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            + +P  LG + SL++L++          S+  +  L +L    C +          LP 
Sbjct: 797 DDEIPKDLGSLISLQDLNLQRNDF-HTLPSLSGLSKLETLRLHHCEQLRTITD----LPT 851

Query: 196 NL--LGKSSCPVALMLPSLTGVCSLTKLDLSD 225
           NL  L  + CP    +P+ + + ++ +L +SD
Sbjct: 852 NLKFLLANGCPALETMPNFSEMSNIRELKVSD 883


>gi|351727991|ref|NP_001235644.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452593|gb|ACM89623.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 1552

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 198/438 (45%), Gaps = 84/438 (19%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            LE L L+GC  L  + ++I     L +L L  C  L K PQ    +  L KL L G   +
Sbjct: 1123 LESLDLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLPQFGEDLI-LEKLLLGGCQKL 1181

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP--DTLGKV 146
              +  SI LL  L  L L  CKNLV LP+SI GL SL+ LNLSGC KL N      L   
Sbjct: 1182 RHIDPSIGLLKKLRRLNLKNCKNLVSLPNSILGLNSLEDLNLSGCSKLYNTELLYELRDA 1241

Query: 147  ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
            E L+++D+ G  I   ++S +  ++ +S                              V+
Sbjct: 1242 EQLKKIDIDGAPIHFQSTSSYSREHKKS------------------------------VS 1271

Query: 207  LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
             ++PS      + KLDLS C L E  IP  I  +  L+ L L+ NNF TLP ++  L  L
Sbjct: 1272 CLMPSSPIFPCMLKLDLSFCNLVE--IPDAIGIMCCLQRLDLSGNNFATLP-NLKKLSKL 1328

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
              L+L+ CK+L+SLP++P                ++   +L ++   I NC + +   R 
Sbjct: 1329 VCLKLQHCKQLKSLPELPSR--------------IYNFDRLRQAGLYIFNCPELVDRERC 1374

Query: 327  NGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKV 386
              +A S   +  ++  +    H   +V PGS+IP+WF  ++EG+ +++     +++ N  
Sbjct: 1375 TDMAFSWTMQSCQVLYLCPFYHVSRVVSPGSEIPRWFNNEHEGNCVSLDASPVMHDHN-W 1433

Query: 387  VGFAICCVFQVPKHSTGTYLFH----SYPAH-----------ELECSMDGSGEGHYIYFR 431
            +G A C +F VP  +     F     +YP +           +LE  +D           
Sbjct: 1434 IGVAFCAIFVVPHETLSAMSFSETEGNYPDYNDIPVDFYEDVDLELVLDK---------- 1483

Query: 432  GKFGHVVSDHLWLLFLPR 449
                   SDH+WL F+ R
Sbjct: 1484 -------SDHMWLFFVGR 1494



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 7/161 (4%)

Query: 646  NCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
            N  +LWE     P++ ++ LS   ++ ++    + L+ L  L L GC  LE +  +I   
Sbjct: 1086 NIKQLWEGTKPLPNLRRLDLSGSKNLIKMPYIGDALY-LESLDLEGCIQLEEIGLSIVLS 1144

Query: 705  KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG--TAIRGLPASIELLSGNILSNLKDC 762
              L++LNL       + P+     D +LE  L G    +R +  SI LL      NLK+C
Sbjct: 1145 PKLTSLNLRNCKSLIKLPQF--GEDLILEKLLLGGCQKLRHIDPSIGLLKKLRRLNLKNC 1202

Query: 763  KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            KNL SLP++I GL SL  +  SGCSKL N TE L ++   E
Sbjct: 1203 KNLVSLPNSILGLNSLEDLNLSGCSKLYN-TELLYELRDAE 1242


>gi|317415950|emb|CAR94516.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 807

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 100/149 (67%), Gaps = 3/149 (2%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   + ++P   + +  LE L LKGC +LS +P  I +L+ L    LSGCSKL+K P+I 
Sbjct: 646 DCQKLIKIPD-FDKVPNLEQLILKGCTSLSEVP-DIINLRSLTNFNLSGCSKLEKIPEIG 703

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI-NGLKSLKTLNLS 131
             M+ L KL+LDGT+I E+P+SIE L GL LL L +CKNL+ LP    + L SL+ LNLS
Sbjct: 704 EDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLS 763

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIR 160
           GC  L+ +PD LG +E L+ELD SGTAIR
Sbjct: 764 GCSNLDKLPDNLGSLECLQELDASGTAIR 792



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 2/122 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L QL L GC +L  +P  I+ L+ L+  NLSG SK  + PEI     QL ++HL+GTAI 
Sbjct: 662 LEQLILKGCTSLSEVPDIIN-LRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDGTAIE 720

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            LP SIE LSG  L +L+DCKNL SLP    + L SL+++  SGCS L  + + LG +E 
Sbjct: 721 ELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSNLDKLPDNLGSLEC 780

Query: 802 LE 803
           L+
Sbjct: 781 LQ 782



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGC 62
           MK L  L+LDGT+I E+P+SIE L+GL LL L+ CKNL SLP V   SL  L+ L LSGC
Sbjct: 706 MKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGC 765

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSI 88
           S L K P  + S+E L +L   GT+I
Sbjct: 766 SNLDKLPDNLGSLECLQELDASGTAI 791



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 4/141 (2%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLP 99
           L SLP +    K L  L LS     + + +I   +E L  L L D   + ++P   + +P
Sbjct: 603 LKSLPSSFEPDK-LVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIPD-FDKVP 660

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            LE L L  C +L  +P  IN L+SL   NLSGC KLE +P+    ++ L +L + GTAI
Sbjct: 661 NLEQLILKGCTSLSEVPDIIN-LRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDGTAI 719

Query: 160 RRPTSSIFLMKNLRSLYFSGC 180
               +SI  +  L  L    C
Sbjct: 720 EELPTSIEHLSGLTLLDLRDC 740



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 647 CSRLWEEADEFPDIVQVLS---DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-S 702
           CS+L +  +   D+ Q+     DGT I EL  +IE L GL  L L  CKNL  LP     
Sbjct: 693 CSKLEKIPEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCD 752

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
           +L  L  LNLSG S   + P+   S + L E+   GTAIR 
Sbjct: 753 SLTSLQILNLSGCSNLDKLPDNLGSLECLQELDASGTAIRA 793



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 75/184 (40%), Gaps = 52/184 (28%)

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L+ L  LNLS C KL  +PD   KV +LE+L + G                         
Sbjct: 636 LEKLLILNLSDCQKLIKIPD-FDKVPNLEQLILKG------------------------- 669

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                                C     +P +  + SLT  +LS C   E  IP   +++ 
Sbjct: 670 ---------------------CTSLSEVPDIINLRSLTNFNLSGCSKLEK-IPEIGEDMK 707

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI----PPNLQFVRANGCSS 297
            L++L+L+      LP SI  L  L  L+L DCK L SLP +      +LQ +  +GCS+
Sbjct: 708 QLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSN 767

Query: 298 LVTL 301
           L  L
Sbjct: 768 LDKL 771


>gi|359486120|ref|XP_003633392.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1218

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 181/385 (47%), Gaps = 53/385 (13%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             +SM +L +L L G  S+ ++  S+ +L     L L  C  L  LP +IS+L+ L  L L
Sbjct: 815  FSSMPNLEELILKGCVSLIDIHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLYL 874

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR----- 114
            + CS   KF +I  +M+ L  LYL  T+I E+PSSI+ L  +E+L L++C    +     
Sbjct: 875  TRCSSFDKFSEIQGNMKSLKFLYLRKTAIRELPSSID-LESVEILDLSDCSKFEKFPENG 933

Query: 115  ------------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
                              LP+ I   +SL+TL+LS C K E  P+  G ++SL++L  +G
Sbjct: 934  ANMKSLYDLSLENTVIKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNG 993

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASAS----WHLHLPFNLLGKSSCPVALM 208
            TAI+    SI  +++L+ L  S C++    P    +    W L+L        +  +  +
Sbjct: 994  TAIKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNL-------KNTAIKDL 1046

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
              S+  + SL  LDLS C   E   P    N+ SLK LYLN      LP SI  L +LE 
Sbjct: 1047 PDSIGDLESLVSLDLSKCSKFE-KFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEI 1105

Query: 269  LELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFG---ALKLCRSKYTIINCIDS 320
            L+L  C + +  P+   N++     +V+      L    G   +LK+    Y    C   
Sbjct: 1106 LDLSKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKILDLSY----CSKF 1161

Query: 321  LKLLRKNGLAISMLREYLELQAVSD 345
             K   K G   S+ + YL   A+ D
Sbjct: 1162 EKFPEKGGNMKSLKQLYLINTAIKD 1186



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 108/211 (51%), Gaps = 46/211 (21%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGC---------------------KN 40
             +MK L  L  +GT+I ++P SI  L  L++L L  C                     KN
Sbjct: 981  GNMKSLKKLCFNGTAIKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKN 1040

Query: 41   --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
              +  LP +I  L+ L +L+LS CSK +KFP+   +M+ L +LYL+ T+I ++P SI  L
Sbjct: 1041 TAIKDLPDSIGDLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDL 1100

Query: 99   PGLELLYLNEC-------------KNLVR----------LPSSINGLKSLKTLNLSGCCK 135
              LE+L L++C             K+L R          LP SI  L+SLK L+LS C K
Sbjct: 1101 ESLEILDLSKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKILDLSYCSK 1160

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
             E  P+  G ++SL++L +  TAI+    SI
Sbjct: 1161 FEKFPEKGGNMKSLKQLYLINTAIKDLPDSI 1191



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 52/280 (18%)

Query: 13  DGTSITEVPSSIELLTGLELLTLK-GCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           DG  +  +PS+ +   G  L+ L   C N+  L      L+ L+ ++LS  +KL + P+ 
Sbjct: 759 DGYPLDFLPSNFD---GENLVELHLKCSNIKQLWQGKKDLESLKVIDLSHSNKLVQMPEF 815

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            +                        +P LE L L  C +L+ +  S+  LK   TLNL+
Sbjct: 816 SS------------------------MPNLEELILKGCVSLIDIHPSVGVLKKFTTLNLT 851

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            C KL+ +P ++  +E+LE L ++  +     S I    N++SL F             L
Sbjct: 852 SCVKLKGLPSSISNLEALECLYLTRCSSFDKFSEI--QGNMKSLKF-------------L 896

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
           +L    + +        LPS   + S+  LDLSDC   E   P +  N+ SL +L L   
Sbjct: 897 YLRKTAIRE--------LPSSIDLESVEILDLSDCSKFE-KFPENGANMKSLYDLSLENT 947

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
               LP  I+   +L+ L+L  C + +  P+   N++ ++
Sbjct: 948 VIKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLK 987



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 2/122 (1%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            L +L  NG   ++ LP +I  L+ L  L+LS  SKF +FPE   +   L +++L+ TAI+
Sbjct: 986  LKKLCFNGTA-IKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIK 1044

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             LP SI  L   +  +L  C   +  P     ++SL+ +Y +  + +K++ +++G +ESL
Sbjct: 1045 DLPDSIGDLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNNTA-IKDLPDSIGDLESL 1103

Query: 803  EV 804
            E+
Sbjct: 1104 EI 1105



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 24/162 (14%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLER-----------------------LPRTIS 702
            +GT I++L  +I  L  L  L L+ C   E+                       LP +I 
Sbjct: 992  NGTAIKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSIG 1051

Query: 703  ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
             L+ L +L+LS  SKF +FPE   +   L  ++L  TAI+ LP SI  L    + +L  C
Sbjct: 1052 DLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDLSKC 1111

Query: 763  KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
               +  P     ++SL+ +Y    + +K++ +++G +ESL++
Sbjct: 1112 SKFEKFPKKGGNMKSLKRLYVKNTA-IKDLPDSIGDLESLKI 1152



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 25/175 (14%)

Query: 653 EADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           E    P++ +++  G   + ++  ++ +L     L L  C  L+ LP +IS L+ L  L 
Sbjct: 814 EFSSMPNLEELILKGCVSLIDIHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLY 873

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN------- 764
           L+  S F +F EI  +   L  ++L  TAIR LP+SI+L S  IL +L DC         
Sbjct: 874 LTRCSSFDKFSEIQGNMKSLKFLYLRKTAIRELPSSIDLESVEIL-DLSDCSKFEKFPEN 932

Query: 765 ----------------LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
                           +K LP+ I    SL+ +  S C K +   E  G ++SL+
Sbjct: 933 GANMKSLYDLSLENTVIKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLK 987



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 34/184 (18%)

Query: 641  PQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER---- 696
            P++ GN   LW          ++    T I++L  +I  L  LV L L+ C   E+    
Sbjct: 1024 PEKGGNMKSLW----------KLNLKNTAIKDLPDSIGDLESLVSLDLSKCSKFEKFPEK 1073

Query: 697  -------------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE 737
                               LP +I  L+ L  L+LS  SKF +FP+   +   L  ++++
Sbjct: 1074 GGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDLSKCSKFEKFPKKGGNMKSLKRLYVK 1133

Query: 738  GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             TAI+ LP SI  L    + +L  C   +  P     ++SL+ +Y    + +K++ +++G
Sbjct: 1134 NTAIKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLKQLYLINTA-IKDLPDSIG 1192

Query: 798  KVES 801
             +E+
Sbjct: 1193 DLEA 1196



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L  C N+++L +    L+ L  ++LS  +K  + PE  SS   L E+ L+G  ++
Sbjct: 775 LVELHLK-CSNIKQLWQGKKDLESLKVIDLSHSNKLVQMPEF-SSMPNLEELILKGCVSL 832

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  S+ +L      NL  C  LK LPS+I+ L +L  +Y + CS     +E  G ++S
Sbjct: 833 IDIHPSVGVLKKFTTLNLTSCVKLKGLPSSISNLEALECLYLTRCSSFDKFSEIQGNMKS 892

Query: 802 LE 803
           L+
Sbjct: 893 LK 894



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 24/132 (18%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI----- 748
            +  LP +I  L+ +  L+LS  SKF +FPE  ++   L ++ LE T I+ LP  I     
Sbjct: 903  IRELPSSID-LESVEILDLSDCSKFEKFPENGANMKSLYDLSLENTVIKELPTGIANWES 961

Query: 749  ----ELLS-----------GNILSNLKDCKN---LKSLPSTINGLRSLRMMYPSGCSKLK 790
                +L S           GN+ S  K C N   +K LP +I  L SL+++  S CSK +
Sbjct: 962  LQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLESLKILDLSYCSKFE 1021

Query: 791  NVTETLGKVESL 802
               E  G ++SL
Sbjct: 1022 KFPEKGGNMKSL 1033



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 25/134 (18%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS- 752
            ++ LP  I+  + L TL+LS   KF +FPE   +   L ++   GTAI+ LP SI  L  
Sbjct: 949  IKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLES 1008

Query: 753  -------------------GNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
                               GN+ S    NLK+   +K LP +I  L SL  +  S CSK 
Sbjct: 1009 LKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTA-IKDLPDSIGDLESLVSLDLSKCSKF 1067

Query: 790  KNVTETLGKVESLE 803
            +   E  G ++SL+
Sbjct: 1068 EKFPEKGGNMKSLK 1081



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 37/62 (59%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            ++ LP +I  L+ L  L+LS  SKF +FPE   +   L +++L  TAI+ LP SI  L  
Sbjct: 1137 IKDLPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLKQLYLINTAIKDLPDSIGDLEA 1196

Query: 754  NI 755
            NI
Sbjct: 1197 NI 1198


>gi|357500665|ref|XP_003620621.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495636|gb|AES76839.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1057

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 210/460 (45%), Gaps = 53/460 (11%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            N+  L      L  LRTL+L     L+K         +L +L L+G  ++ E+  SI LL
Sbjct: 616  NIKQLWKNKKYLPNLRTLDLRHSRNLEKIIDF-GEFPNLERLDLEGCINLVELDPSIGLL 674

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L  L L +CK+LV +P++I GL SL+ LN+ GC K+ N P  L K         SG +
Sbjct: 675  RKLVYLNLKDCKSLVSIPNNIFGLSSLQYLNMCGCSKVFNNPRRLMK---------SGIS 725

Query: 159  IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCS 217
              +                   ++   SAS HL  L + +L   S   + MLPSL  +C 
Sbjct: 726  SEKKQQ----------------HDIRESASHHLPGLKWIILAHDS---SHMLPSLHSLCC 766

Query: 218  LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            L K+D+S C L  + +P  I+ LH L+ L L  N+FVTLP S+  L  L  L LE CK L
Sbjct: 767  LRKVDISFCYL--SHVPDAIECLHWLERLNLAGNDFVTLP-SLRKLSKLVYLNLEHCKLL 823

Query: 278  QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREY 337
            +SLPQ+P    F    G    V        C +   I NC    +  R++  ++++L   
Sbjct: 824  ESLPQLP----FPTNTG---EVHREYDDYFCGAGLLIFNCPKLGE--REHCRSMTLLWMK 874

Query: 338  LELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTR-PSYLYNVNKVVGFAICCVFQ 396
              ++A      ++ IV PGS+IP W   Q  G SI + R P    N N ++G   C  F 
Sbjct: 875  QFIKANPRSSSEIQIVNPGSEIPSWINNQRMGYSIAIDRSPIRHDNDNNIIGIVCCAAFT 934

Query: 397  VPKHSTGTYLFHSYPAHELECSMDGSGE---GHYIYFRGKFGHVVSDHLWLLFLPRHGHN 453
            +  +     +F+S     L      S E      +  +       S HLW+++LPR    
Sbjct: 935  MAPYRE---IFYSSELMNLAFKRIDSNERLLKMRVPVKLSLVTTKSSHLWIIYLPREYPG 991

Query: 454  WQ-FESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFD 492
            +   E   I L F  +     +V+ CG+  +   +++EF+
Sbjct: 992  YSCHEFGKIELKFFEVE--GLEVESCGYRWVCKQDIQEFN 1029



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 7/153 (4%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G  ++ E+  SI LL  L  L LK CK+L S+P  I  L  L+ L + GCSK
Sbjct: 652 NLERLDLEGCINLVELDPSIGLLRKLVYLNLKDCKSLVSIPNNIFGLSSLQYLNMCGCSK 711

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +   P+ +     +S        I E  S+   LPGL+ + L    +   +  S++ L  
Sbjct: 712 VFNNPRRLMK-SGISSEKKQQHDIRE--SASHHLPGLKWIIL--AHDSSHMLPSLHSLCC 766

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L+ +++S  C L +VPD +  +  LE L+++G 
Sbjct: 767 LRKVDIS-FCYLSHVPDAIECLHWLERLNLAGN 798



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIEL 750
           KN + LP  +  L    + NL  +  F EFP        L  + LEG   +  L  SI L
Sbjct: 622 KNKKYLP-NLRTLDLRHSRNLEKIIDFGEFP-------NLERLDLEGCINLVELDPSIGL 673

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           L   +  NLKDCK+L S+P+ I GL SL+ +   GCSK+ N    L K
Sbjct: 674 LRKLVYLNLKDCKSLVSIPNNIFGLSSLQYLNMCGCSKVFNNPRRLMK 721


>gi|317415955|emb|CAR94520.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 806

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 101/149 (67%), Gaps = 3/149 (2%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   + ++P   + +  LE L LKGC +LS +P  I +L+ L    LSGCSKL+K P+I 
Sbjct: 646 DCQKLIKIPD-FDKVPNLEQLILKGCTSLSEVP-DIINLRSLTNFILSGCSKLEKLPEIG 703

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI-NGLKSLKTLNLS 131
             M+ L KL+LDGT+I E+P+SIE L GL LL L +CKNL+ LP  + + L SL+ LNLS
Sbjct: 704 EDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLS 763

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIR 160
           GC  L+ +PD LG +E L+ELD SGTAIR
Sbjct: 764 GCSNLDKLPDNLGSLECLQELDASGTAIR 792



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 77/122 (63%), Gaps = 2/122 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L QL L GC +L  +P  I+ L+ L+   LSG SK  + PEI     QL ++HL+GTAI 
Sbjct: 662 LEQLILKGCTSLSEVPDIIN-LRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDGTAIE 720

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            LP SIE LSG  L +L+DCKNL SLP  + + L SL+++  SGCS L  + + LG +E 
Sbjct: 721 ELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCSNLDKLPDNLGSLEC 780

Query: 802 LE 803
           L+
Sbjct: 781 LQ 782



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGC 62
           MK L  L+LDGT+I E+P+SIE L+GL LL L+ CKNL SLP V   SL  L+ L LSGC
Sbjct: 706 MKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGC 765

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSI 88
           S L K P  + S+E L +L   GT+I
Sbjct: 766 SNLDKLPDNLGSLECLQELDASGTAI 791



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 649 RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYL 707
           +L E  ++   + ++  DGT I EL  +IE L GL  L L  CKNL  LP  +  +L  L
Sbjct: 698 KLPEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSL 757

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
             LNLSG S   + P+   S + L E+   GTAIR 
Sbjct: 758 QVLNLSGCSNLDKLPDNLGSLECLQELDASGTAIRA 793



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 96/207 (46%), Gaps = 26/207 (12%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLP 99
           L SLP +    K L  L LS     + + +I   +E L  L L D   + ++P   + +P
Sbjct: 603 LKSLPSSFEPDK-LVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIPD-FDKVP 660

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            LE L L  C +L  +P  IN L+SL    LSGC KLE +P+    ++ L +L + GTAI
Sbjct: 661 NLEQLILKGCTSLSEVPDIIN-LRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDGTAI 719

Query: 160 RRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT 219
               +SI  +  L  L    C               NLL   S P  ++  SLT   SL 
Sbjct: 720 EELPTSIEHLSGLTLLDLRDCK--------------NLL---SLP-DVLCDSLT---SLQ 758

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKEL 246
            L+LS C      +P ++ +L  L+EL
Sbjct: 759 VLNLSGCS-NLDKLPDNLGSLECLQEL 784



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 74/184 (40%), Gaps = 52/184 (28%)

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L+ L  LNLS C KL  +PD   KV +LE+L + G                         
Sbjct: 636 LEKLLILNLSDCQKLIKIPD-FDKVPNLEQLILKG------------------------- 669

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                                C     +P +  + SLT   LS C   E  +P   +++ 
Sbjct: 670 ---------------------CTSLSEVPDIINLRSLTNFILSGCSKLEK-LPEIGEDMK 707

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI----PPNLQFVRANGCSS 297
            L++L+L+      LP SI  L  L  L+L DCK L SLP +      +LQ +  +GCS+
Sbjct: 708 QLRKLHLDGTAIEELPTSIEHLSGLTLLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCSN 767

Query: 298 LVTL 301
           L  L
Sbjct: 768 LDKL 771


>gi|297802316|ref|XP_002869042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314878|gb|EFH45301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1178

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 198/421 (47%), Gaps = 80/421 (19%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + K L  L L+G TS+ E+PS ++ L  L  L ++GC +L  LP    +L  ++TL L
Sbjct: 672  LLNAKSLQRLNLEGCTSLEELPSEMKSLENLVFLNMRGCTSLRVLPHM--NLISMKTLIL 729

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            + CS L++F Q+++  +++  LYLDGT+I ++P ++  L  L +L L +CK L  +P  +
Sbjct: 730  TNCSSLEEF-QVIS--DNIETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCL 786

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LK+L+ L LSGC  L+  P  +  ++ L+ L + GT I+                   
Sbjct: 787  GRLKALQELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKE------------------ 828

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                         +P +    S    DL +   G   + S    
Sbjct: 829  -----------------------------IPKILQYNSSKVEDLRELRRGVKGLSS---- 855

Query: 240  LHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
               L+ L L+RN  ++ L   IS L +L+ L+L+ CK L S+  +PPNL+ + A+GC  L
Sbjct: 856  ---LRRLCLSRNGMISNLQIDISQLYHLKWLDLKYCKNLTSISLLPPNLEILDAHGCEKL 912

Query: 299  VTLFGALKL------CRSKYTIINCIDSLKLLRKNGLA--------ISMLREYLELQAVS 344
             T+   + L       RSK+   NC + L+ + KN +         +  LR Y E   VS
Sbjct: 913  KTVASPMALPKLMEQVRSKFIFTNC-NKLEQVAKNSITLYAQRKCQLDALRCYKE-GTVS 970

Query: 345  DPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGT 404
            +    L   FPGS++P WF +Q  GS + +  P +  + N +    +C V + P+     
Sbjct: 971  EA--LLITCFPGSEVPSWFNHQTFGSKLKLKFPPHWCD-NGLSTLVLCAVVKFPRDEINR 1027

Query: 405  Y 405
            +
Sbjct: 1028 F 1028



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 19/143 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP-------------------E 723
           L +L L GC +LE LP  + +L+ L  LN+ G +  R  P                   E
Sbjct: 678 LQRLNLEGCTSLEELPSEMKSLENLVFLNMRGCTSLRVLPHMNLISMKTLILTNCSSLEE 737

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                D +  ++L+GTAI  LP ++  L   I+ NLKDCK L+++P  +  L++L+ +  
Sbjct: 738 FQVISDNIETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCLGRLKALQELVL 797

Query: 784 SGCSKLKNVTETLGKVESLEVRL 806
           SGCS LK     +  ++ L++ L
Sbjct: 798 SGCSTLKTFPVPIENMKCLQILL 820



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 9/137 (6%)

Query: 646 NCSRLWEEADEFPDIVQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           NCS L EE     D ++ L  DGT I +L   +  L  L+ L L  CK L  +P+ +  L
Sbjct: 731 NCSSL-EEFQVISDNIETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCLGRL 789

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           K L  L LSG S  + FP    +   L  + L+GT I+ +P  ++  S  +       ++
Sbjct: 790 KALQELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKEIPKILQYNSSKV-------ED 842

Query: 765 LKSLPSTINGLRSLRMM 781
           L+ L   + GL SLR +
Sbjct: 843 LRELRRGVKGLSSLRRL 859



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 58/241 (24%)

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+K P+   + ++L+ L L  + I EV   ++  P L+ + L+    L  L   +N  KS
Sbjct: 620 LEKLPKDF-NPKNLTDLNLPYSEIEEVWEGLKDTPKLKWVDLSHSSKLCNLTGLLNA-KS 677

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L+ LNL GC  LE +P  +  +E+L                +FL  N+R           
Sbjct: 678 LQRLNLEGCTSLEELPSEMKSLENL----------------VFL--NMRG---------- 709

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSL 243
                             C    +LP +  + S+  L L++C  L E  + SD     ++
Sbjct: 710 ------------------CTSLRVLPHMN-LISMKTLILTNCSSLEEFQVISD-----NI 745

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVT 300
           + LYL+    V LP ++  L  L  L L+DCK L+++PQ    L+ ++    +GCS+L T
Sbjct: 746 ETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKMLRAVPQCLGRLKALQELVLSGCSTLKT 805

Query: 301 L 301
            
Sbjct: 806 F 806


>gi|297805242|ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316341|gb|EFH46764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 159/294 (54%), Gaps = 10/294 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L G +S+ E+PS  + +TGL  L L+GC +L  +P +I     LR L+L
Sbjct: 589 IGKLSNLDYLCLGGCSSLLELPSFTKNVTGLVDLDLRGCSSLVEIPSSIGHAINLRILDL 648

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S CS L   P  V +  +L  +YL G S + E+PSSI  L  LE L L+ C +LV LP  
Sbjct: 649 SKCSSLVGLPSFVGNAINLRNVYLKGCSNLVELPSSIVDLINLEKLDLSGCSSLVELPCI 708

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
            N + +L+ L+LS C  L  +P  +G    LE+L+++  +      SI    NL+ L   
Sbjct: 709 RNAV-NLQMLDLSDCSSLVKLPSFVGNATKLEKLNLTNCSNLLELPSIDNATNLQELLLE 767

Query: 179 GCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
            C+   + P++    ++L   L+   +C   + +P++  V +L  LDLS C      IP 
Sbjct: 768 NCSRLMKLPSTLRNAINL--QLINLKNCSNVVKIPAIENVTNLNLLDLSGCS-SLVEIPP 824

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            I  + SL +LYLNR ++ V LP+SI  + +L+EL L+DC  L +LP    NL 
Sbjct: 825 SIGTVTSLHKLYLNRCSSLVELPSSIGNITSLQELNLQDCSNLLALPFSIGNLH 878



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 143/279 (51%), Gaps = 30/279 (10%)

Query: 28  TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-T 86
           T LE L L+ C +L  LP +I  L  L  L L GCS L + P    ++  L  L L G +
Sbjct: 569 TNLETLILENCSSLMELPSSIGKLSNLDYLCLGGCSSLLELPSFTKNVTGLVDLDLRGCS 628

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+ E+PSSI     L +L L++C +LV LPS +    +L+ + L GC  L  +P ++  +
Sbjct: 629 SLVEIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLRNVYLKGCSNLVELPSSIVDL 688

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
            +LE+LD+SG       SS+  +  +R+                  +   +L  S C   
Sbjct: 689 INLEKLDLSGC------SSLVELPCIRN-----------------AVNLQMLDLSDCSSL 725

Query: 207 LMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLL 264
           + LPS  G    L KL+L++C      +PS IDN  +L+EL L N +  + LP+++   +
Sbjct: 726 VKLPSFVGNATKLEKLNLTNCS-NLLELPS-IDNATNLQELLLENCSRLMKLPSTLRNAI 783

Query: 265 NLEELELEDCKRLQSLPQIP--PNLQFVRANGCSSLVTL 301
           NL+ + L++C  +  +P I    NL  +  +GCSSLV +
Sbjct: 784 NLQLINLKNCSNVVKIPAIENVTNLNLLDLSGCSSLVEI 822



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 136/260 (52%), Gaps = 14/260 (5%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L+ ++ + LS    LK+ P + ++  +L  L L+  +S+ E+PSSI  L  L+ L L  C
Sbjct: 545 LRNIKWMVLSNSKNLKELPDL-STATNLETLILENCSSLMELPSSIGKLSNLDYLCLGGC 603

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFL 168
            +L+ LPS    +  L  L+L GC  L  +P ++G   +L  LD+S  +++    S +  
Sbjct: 604 SSLLELPSFTKNVTGLVDLDLRGCSSLVEIPSSIGHAINLRILDLSKCSSLVGLPSFVGN 663

Query: 169 MKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD 225
             NLR++Y  GC+   E P+S    ++L    L  S C   + LP +    +L  LDLSD
Sbjct: 664 AINLRNVYLKGCSNLVELPSSIVDLINL--EKLDLSGCSSLVELPCIRNAVNLQMLDLSD 721

Query: 226 CGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI- 283
           C      +PS + N   L++L L N +N + LP SI    NL+EL LE+C RL  LP   
Sbjct: 722 CS-SLVKLPSFVGNATKLEKLNLTNCSNLLELP-SIDNATNLQELLLENCSRLMKLPSTL 779

Query: 284 --PPNLQFVRANGCSSLVTL 301
               NLQ +    CS++V +
Sbjct: 780 RNAINLQLINLKNCSNVVKI 799



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 205/496 (41%), Gaps = 88/496 (17%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +++ E+PS I+  T L+ L L+ C  L  LP T+ +   L+ + L  CS + K P I  +
Sbjct: 747  SNLLELPS-IDNATNLQELLLENCSRLMKLPSTLRNAINLQLINLKNCSNVVKIPAI-EN 804

Query: 75   MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            + +L+ L L G +S+ E+P SI  +  L  LYLN C +LV LPSSI  + SL+ LNL  C
Sbjct: 805  VTNLNLLDLSGCSSLVEIPPSIGTVTSLHKLYLNRCSSLVELPSSIGNITSLQELNLQDC 864

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
              L  +P ++G +  L+EL +         S  F +K    L+ S C++          L
Sbjct: 865  SNLLALPFSIGNLHKLQELHL---------SFFFFVK---QLHLSRCSKLEV-------L 905

Query: 194  PFNL-------LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP------------ 234
            P N+       L    C    + P ++   ++  L+L    + E  +             
Sbjct: 906  PININLESLKVLDLIFCTRLKIFPEIS--TNIVYLNLVGTTIEEVPLSIRSWPRLDIFCM 963

Query: 235  SDIDNLHSLKE-------LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            S  +NL+           L+L+  +   +   + G+  L+++ L  CKRL SLPQ+P  L
Sbjct: 964  SYFENLNEFPHALDIITCLHLS-GDIQEVATWVKGISRLDQILLYGCKRLVSLPQLPDIL 1022

Query: 288  QFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
              +    C+SL  L  +      +    NC      L K        R+ +   + S   
Sbjct: 1023 SDLDTENCASLEKLDCSFHNSEIRLNFANCFK----LNKEA------RDLIIQTSTSKYA 1072

Query: 348  HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
                 + PG ++   F Y+  G S+TV         +      +  +++  + +  T   
Sbjct: 1073 -----ILPGREVSSSFTYRAAGDSVTVKLNEGPLPTSLRFKVCVLIIYKGDEKAGDTNTK 1127

Query: 408  HSYPAHELECSMDGSGEGHYIYFR-GKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFR 466
            H              GE    Y + G  G+   D L    +  H + ++ E+ +    F 
Sbjct: 1128 H--------------GEFFIFYLQNGNIGYKYLDPL----VTGHQYIFEVEAEVTSSEFD 1169

Query: 467  ---SISDPTWKVKRCG 479
               +I    WK+  CG
Sbjct: 1170 FYFAIGREEWKIVECG 1185



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA- 740
           GLV L L GC +L  +P +I     L  L+LS  S     P    +   L  ++L+G + 
Sbjct: 618 GLVDLDLRGCSSLVEIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLRNVYLKGCSN 677

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  LP+SI  L      +L  C +L  LP   N + +L+M+  S CS L  +   +G   
Sbjct: 678 LVELPSSIVDLINLEKLDLSGCSSLVELPCIRNAV-NLQMLDLSDCSSLVKLPSFVGNAT 736

Query: 801 SLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVDKCMKLSTTATS 860
            LE       +  + N  + +E  +++  T L +  L        +N  + MKL +T  +
Sbjct: 737 KLE-------KLNLTNCSNLLELPSIDNATNLQELLL--------ENCSRLMKLPSTLRN 781

Query: 861 A 861
           A
Sbjct: 782 A 782



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 638  RQSPQEPGNCSRLWEEADEFP---DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL 694
            R  P+    C   +E  +EFP   DI+  L    DI+E++  ++ +  L Q+ L GCK L
Sbjct: 953  RSWPRLDIFCMSYFENLNEFPHALDIITCLHLSGDIQEVATWVKGISRLDQILLYGCKRL 1012

Query: 695  ERLPRTISALKYLSTLNLSGLSKF 718
              LP+    L  L T N + L K 
Sbjct: 1013 VSLPQLPDILSDLDTENCASLEKL 1036


>gi|356514917|ref|XP_003526148.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1106

 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 64/481 (13%)

Query: 24   IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
            IE    LE L L+GC  L  + ++I     L +L L  C  L K P+    +  L KL L
Sbjct: 665  IEDALYLESLNLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLPRFGEDLI-LGKLVL 723

Query: 84   DG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP-- 140
            +G   +  +  SI LL  L  L L  CKNLV LP+SI GL SL+ LNLSGC K+ N    
Sbjct: 724  EGCRKLRHIDPSIGLLKKLRELNLKNCKNLVSLPNSILGLNSLQYLNLSGCSKVYNTELL 783

Query: 141  DTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGK 200
              L   E L+++D  G  I   ++S    ++ +S                          
Sbjct: 784  YELRDAEQLKKIDKDGAPIHFQSTSSDSRQHKKS-------------------------- 817

Query: 201  SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASI 260
                V+ ++PS      + +LDLS C L E  IP  I  +  L+ L L+ NNF TLP ++
Sbjct: 818  ----VSCLMPSSPIFQCMRELDLSFCNLVE--IPDAIGIMSCLERLDLSGNNFATLP-NL 870

Query: 261  SGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDS 320
              L  L  L+L+ CK+L+SLP++P  ++     G       FG     ++   I NC   
Sbjct: 871  KKLSKLVCLKLQHCKQLKSLPELPSRIEIPTPAG------YFGN----KAGLYIFNCPKL 920

Query: 321  LKLLRKNGLAISMLREYLELQAV--SDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
            +   R   +A S + +      +  S   +    V PGS+IP+WF  ++EG+ +++    
Sbjct: 921  VDRERCTNMAFSWMMQLCSQVCILFSLWYYHFGGVTPGSEIPRWFNNEHEGNCVSLDASP 980

Query: 379  YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSY--PAHEL-ECSMDGSGEGHYIYFRGKFG 435
             +++ N  +G A C +F VP  +     F +   P H   +  +D  G+        K  
Sbjct: 981  VMHDRN-WIGVAFCAIFVVPHETLLAMGFSNSKGPRHLFGDIRVDFYGDVDLELVLDK-- 1037

Query: 436  HVVSDHLWLLFLPRHGHNWQF---ESNLIRLSFRS---ISDPTWKVKRCGFHPIYMHEVE 489
               SDH+ L FL RH     F      L R   R    + +   +VK+ G+  +Y  ++E
Sbjct: 1038 ---SDHMCLFFLKRHDIIADFHLKHRYLGRWVSRYDGVLKESYAEVKKYGYRWVYKGDIE 1094

Query: 490  E 490
            +
Sbjct: 1095 Q 1095



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 5/160 (3%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N  +LWE     P++ ++   G+        IE    L  L L GC  LE +  +I    
Sbjct: 634 NIKQLWEGTKPLPNLRRLDLFGSKNLIKMPYIEDALYLESLNLEGCIQLEEIGLSIVLSP 693

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLL-EIHLEG-TAIRGLPASIELLSGNILSNLKDCK 763
            L++LNL       + P      D +L ++ LEG   +R +  SI LL      NLK+CK
Sbjct: 694 KLTSLNLRNCKSLIKLPRF--GEDLILGKLVLEGCRKLRHIDPSIGLLKKLRELNLKNCK 751

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           NL SLP++I GL SL+ +  SGCSK+ N TE L ++   E
Sbjct: 752 NLVSLPNSILGLNSLQYLNLSGCSKVYN-TELLYELRDAE 790



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 12/154 (7%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L+G   +  +  SI LL  L  L LK CKNL SLP +I  L  L+ L LSGCSK+
Sbjct: 718 LGKLVLEGCRKLRHIDPSIGLLKKLRELNLKNCKNLVSLPNSILGLNSLQYLNLSGCSKV 777

Query: 66  KKFPQI--VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
                +  +   E L K+  DG  I    +S +             K++  L  S    +
Sbjct: 778 YNTELLYELRDAEQLKKIDKDGAPIHFQSTSSD--------SRQHKKSVSCLMPSSPIFQ 829

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            ++ L+LS  C L  +PD +G +  LE LD+SG 
Sbjct: 830 CMRELDLS-FCNLVEIPDAIGIMSCLERLDLSGN 862


>gi|224127254|ref|XP_002329438.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870488|gb|EEF07619.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1162

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 209/414 (50%), Gaps = 39/414 (9%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+TEVPSS++ L  LE + L  C NL S P+  S  K LR L +  C  L   P I  +M
Sbjct: 673  SLTEVPSSLQYLDKLEEIDLNRCYNLRSFPMLDS--KVLRKLSIGLCLDLTTCPTISQNM 730

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
                 L L+ TSI EVP S+     L++L LN C  + + P  I+G   ++ L LSG  K
Sbjct: 731  ---VCLRLEQTSIKEVPQSVT--GKLKVLDLNGCSKMTKFPE-ISG--DIEQLRLSGTIK 782

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFS--GCNEPPASASWHLH 192
               +P ++  +  LE LD+SG +       I + M++LR L+ S  G  E P+ +  H+ 
Sbjct: 783  --EMPSSIQFLTRLEMLDMSGCSKLESFPEITVPMESLRYLFLSKTGIKEIPSISFKHM- 839

Query: 193  LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
               N L     P+  +  S+  +  L +L+LS C   E+  P     + SL+ L L++  
Sbjct: 840  TSLNTLNLDGTPLKELPSSIQFLTRLYELNLSGCSKLES-FPEITVPMKSLEVLNLSKTG 898

Query: 253  FVTLPAS-ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
               +P+S I  L++L  L L D   +++LP++P  L+ +    C+SL T    +    S 
Sbjct: 899  IKEIPSSLIKHLISLRCLNL-DGTPIKALPELPSLLRKLTTRDCASLETTISIINFS-SL 956

Query: 312  YTIINCIDSLKLLRKNGLAISMLREYLELQAVSD-PGHKLSIVFPGSQIPKWFMYQNEGS 370
            +  ++  +  KL +K  +A+     +L++Q+  + P   + +V PGS+IP+WF  +  GS
Sbjct: 957  WFGLDFTNCFKLDQKPLVAVM----HLKIQSGEEIPDGSIQMVLPGSEIPEWFGDKGVGS 1012

Query: 371  SITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE 424
            S+T+  PS   N +++ G A C VF +P            P+ ++ C +D   +
Sbjct: 1013 SLTIQLPS---NCHQLKGIAFCLVFLLP-----------LPSQDMPCEVDDDSQ 1052



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 103/192 (53%), Gaps = 26/192 (13%)

Query: 10  LYLDGTSITEVPSSIELLTG-LELLTLKGCKNLSS-------------------LPVTIS 49
           L L+ TSI EVP S+   TG L++L L GC  ++                    +P +I 
Sbjct: 733 LRLEQTSIKEVPQSV---TGKLKVLDLNGCSKMTKFPEISGDIEQLRLSGTIKEMPSSIQ 789

Query: 50  SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPS-SIELLPGLELLYLNE 108
            L  L  L++SGCSKL+ FP+I   ME L  L+L  T I E+PS S + +  L  L L+ 
Sbjct: 790 FLTRLEMLDMSGCSKLESFPEITVPMESLRYLFLSKTGIKEIPSISFKHMTSLNTLNLDG 849

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIF 167
              L  LPSSI  L  L  LNLSGC KLE+ P+    ++SLE L++S T I+  P+S I 
Sbjct: 850 TP-LKELPSSIQFLTRLYELNLSGCSKLESFPEITVPMKSLEVLNLSKTGIKEIPSSLIK 908

Query: 168 LMKNLRSLYFSG 179
            + +LR L   G
Sbjct: 909 HLISLRCLNLDG 920



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 89/188 (47%), Gaps = 26/188 (13%)

Query: 4    MKDLSDLYLDGTSITEVPS-SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            M+ L  L+L  T I E+PS S + +T L  L L G   L  LP +I  L  L  L LSGC
Sbjct: 815  MESLRYLFLSKTGIKEIPSISFKHMTSLNTLNLDGTP-LKELPSSIQFLTRLYELNLSGC 873

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSS-IELLPGLELLYLN--ECKNLVRLPSSI 119
            SKL+ FP+I   M+ L  L L  T I E+PSS I+ L  L  L L+    K L  LPS +
Sbjct: 874  SKLESFPEITVPMKSLEVLNLSKTGIKEIPSSLIKHLISLRCLNLDGTPIKALPELPSLL 933

Query: 120  NGL-----KSLKT-------------LNLSGCCKLENVPDTLG---KVESLEELDVSGTA 158
              L      SL+T             L+ + C KL+  P       K++S EE+      
Sbjct: 934  RKLTTRDCASLETTISIINFSSLWFGLDFTNCFKLDQKPLVAVMHLKIQSGEEIPDGSIQ 993

Query: 159  IRRPTSSI 166
            +  P S I
Sbjct: 994  MVLPGSEI 1001



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 4/121 (3%)

Query: 685 QLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
           QL L+G   ++ +P +I  L  L  L++SG SK   FPEIT   + L  + L  T I+ +
Sbjct: 774 QLRLSG--TIKEMPSSIQFLTRLEMLDMSGCSKLESFPEITVPMESLRYLFLSKTGIKEI 831

Query: 745 PASIELLSGNILSNLK-DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           P SI       L+ L  D   LK LPS+I  L  L  +  SGCSKL++  E    ++SLE
Sbjct: 832 P-SISFKHMTSLNTLNLDGTPLKELPSSIQFLTRLYELNLSGCSKLESFPEITVPMKSLE 890

Query: 804 V 804
           V
Sbjct: 891 V 891



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 3/136 (2%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS++ +  +   DI Q+   GT I+E+  +I+ L  L  L ++GC  LE  P     ++ 
Sbjct: 759 CSKMTKFPEISGDIEQLRLSGT-IKEMPSSIQFLTRLEMLDMSGCSKLESFPEITVPMES 817

Query: 707 LSTLNLSGLSKFREFPEITSSR-DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
           L  L LS  +  +E P I+      L  ++L+GT ++ LP+SI+ L+     NL  C  L
Sbjct: 818 LRYLFLSK-TGIKEIPSISFKHMTSLNTLNLDGTPLKELPSSIQFLTRLYELNLSGCSKL 876

Query: 766 KSLPSTINGLRSLRMM 781
           +S P     ++SL ++
Sbjct: 877 ESFPEITVPMKSLEVL 892



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 17/142 (11%)

Query: 647 CSRLWEEADEFPDIV-------QVLSDGTDIREL-SLAIELLFGLVQLTLNGCKNLERLP 698
           CS+L    + FP+I         +    T I+E+ S++ + +  L  L L+G   L+ LP
Sbjct: 802 CSKL----ESFPEITVPMESLRYLFLSKTGIKEIPSISFKHMTSLNTLNLDGTP-LKELP 856

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI--ELLSGNIL 756
            +I  L  L  LNLSG SK   FPEIT     L  ++L  T I+ +P+S+   L+S   L
Sbjct: 857 SSIQFLTRLYELNLSGCSKLESFPEITVPMKSLEVLNLSKTGIKEIPSSLIKHLISLRCL 916

Query: 757 SNLKDCKNLKSLPSTINGLRSL 778
            NL D   +K+LP   + LR L
Sbjct: 917 -NL-DGTPIKALPELPSLLRKL 936



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 54/92 (58%), Gaps = 6/92 (6%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           +++ +P++++    L  L+L+G SK  +FPEI+   +QL    L GT I+ +P+SI+ L+
Sbjct: 739 SIKEVPQSVTG--KLKVLDLNGCSKMTKFPEISGDIEQL---RLSGT-IKEMPSSIQFLT 792

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
              + ++  C  L+S P     + SLR ++ S
Sbjct: 793 RLEMLDMSGCSKLESFPEITVPMESLRYLFLS 824



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 21/221 (9%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E L +L L  + +  + + ++ +  L  + L+E   L  LP  ++  K+L  L L  C  
Sbjct: 615 EHLVELRLPKSKLVRLWTGVKDVGNLRTIDLSESPYLTELPD-LSMAKNLVCLRLGRCPS 673

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L  VP +L  ++ LEE+D++     R +  +   K LR L    C +     +   ++  
Sbjct: 674 LTEVPSSLQYLDKLEEIDLNRCYNLR-SFPMLDSKVLRKLSIGLCLDLTTCPTISQNMVC 732

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG--LGEAAIPSDIDNLH---SLKELYLNR 250
             L ++S  +  +  S+TG   L  LDL+ C        I  DI+ L    ++KE     
Sbjct: 733 LRLEQTS--IKEVPQSVTG--KLKVLDLNGCSKMTKFPEISGDIEQLRLSGTIKE----- 783

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
                +P+SI  L  LE L++  C +L+S P+I   ++ +R
Sbjct: 784 -----MPSSIQFLTRLEMLDMSGCSKLESFPEITVPMESLR 819


>gi|449482307|ref|XP_004156243.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1857

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 112/281 (39%), Positives = 155/281 (55%), Gaps = 39/281 (13%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSL--PVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + +V SSI  L  L LL ++GC +  S   PVT  SLK   TL LS C  L+ FP+    
Sbjct: 1242 LNKVHSSINSLHRLILLDMEGCVSFRSFSFPVTCKSLK---TLVLSNCG-LEFFPEFGCV 1297

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            M  L++L++DGTSI ++  SI  L GL LL L  C  L  LP+ I  L SLKTL L+GC 
Sbjct: 1298 MGYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCK 1357

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
             L+ +P  L  V+ LEELD+ GT+I    S+I  ++NLR L    C E   S  WH    
Sbjct: 1358 NLDKIPPCLRYVKHLEELDIGGTSI----STIPFLENLRIL---NC-ERLKSNIWH---- 1405

Query: 195  FNLLGKSSCPVALMLPSLTGVC-----SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                            SL G+      SL  L+LSDC L +  IP+D++   SL+ L L+
Sbjct: 1406 ----------------SLAGLAAQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDLS 1449

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
             N+F  L  SI  L+NL+ L L DC +L+ +P++P ++++V
Sbjct: 1450 SNHFERLSESIKQLINLKVLYLNDCNKLKQVPKLPKSIKYV 1490



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 103/189 (54%), Gaps = 20/189 (10%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            M  L++L++DGTSI ++  SI  L GL LL L+ C  LSSLP  I  L  L+TL L+GC 
Sbjct: 1298 MGYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCK 1357

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI---- 119
             L K P  +  ++ L +L + GTSI+ +P     L  L +L      N  RL S+I    
Sbjct: 1358 NLDKIPPCLRYVKHLEELDIGGTSISTIP----FLENLRIL------NCERLKSNIWHSL 1407

Query: 120  -----NGLKSLKTLNLSGCCKL-ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
                   L+SL  LNLS C  + E++P+ L    SLE LD+S     R + SI  + NL+
Sbjct: 1408 AGLAAQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDLSSNHFERLSESIKQLINLK 1467

Query: 174  SLYFSGCNE 182
             LY + CN+
Sbjct: 1468 VLYLNDCNK 1476



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 27/185 (14%)

Query: 644  PG-NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFG--LVQLTLNGCKNLERLPRT 700
            PG N  RLW     F ++ ++  D +D + L           L +L L  C  L ++  +
Sbjct: 1191 PGSNVERLWNGTQNFKNLKEI--DASDSKFLVETPNFSEAPKLRRLILRNCGRLNKVHSS 1248

Query: 701  ISALKYLSTLNLSGLSKFREF----------------------PEITSSRDQLLEIHLEG 738
            I++L  L  L++ G   FR F                      PE       L E+H++G
Sbjct: 1249 INSLHRLILLDMEGCVSFRSFSFPVTCKSLKTLVLSNCGLEFFPEFGCVMGYLTELHIDG 1308

Query: 739  TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            T+I  L  SI  L G +L NL++C  L SLP+ I  L SL+ +  +GC  L  +   L  
Sbjct: 1309 TSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLDKIPPCLRY 1368

Query: 799  VESLE 803
            V+ LE
Sbjct: 1369 VKHLE 1373


>gi|307135796|gb|ADN33675.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 1393

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 216/480 (45%), Gaps = 76/480 (15%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             ++  +L +LYL + T++  +  S+  L  L +L L  C NL  LP +   L  L+ L L
Sbjct: 727  FSAASNLEELYLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNL 786

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S C KL+K P + A+    S    + T++  +  S+  L  L  + L+ C NL +LP+ +
Sbjct: 787  SYCKKLEKIPDLSAASNLQSLCLHECTNLRLIHESVGSLYKLIDMDLSGCTNLAKLPTYL 846

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LKSL+ L LS CCKLE+ P     +ESL ELD+  TAI+   SSI  +  L  L  +G
Sbjct: 847  R-LKSLRYLGLSECCKLESFPSIAENMESLRELDMDFTAIKELPSSIGYLTQLYRLNLTG 905

Query: 180  C-NEPPASASWHLHLPFNLLGKSSCPVALMLP-----SLTGVCS---------------- 217
            C N      + +L    + L  S C    M P     ++  VCS                
Sbjct: 906  CTNLISLPNTIYLLRNLDKLLLSGCSRFEMFPHKWDPTIQPVCSPSKMMEATSWSLEYPH 965

Query: 218  ----------LTKLDLSDCGLGEAAIPSDI-DNLHSLKELYLNRNNFVTLPASISGLLNL 266
                       T LDL  C +  A     + D    L +L L+ N F +LP+ +   ++L
Sbjct: 966  LLPNESLCSHFTLLDLQSCNISNAKFLEILCDVAPFLSDLRLSENKFSSLPSCLHKFMSL 1025

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
              LEL++CK LQ +P +P N+Q + A+GC SL          RS   I++ I       K
Sbjct: 1026 WNLELKNCKFLQEIPNLPQNIQNLDASGCKSLA---------RSPDNIMDIISI-----K 1071

Query: 327  NGLAISML-REYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNK 385
              LA+  + RE+L                 G +IP+WF Y+   S++      +  ++ +
Sbjct: 1072 QDLAMDEISREFL---------------LTGIEIPEWFSYKT-ASNLASASFRHYQDIER 1115

Query: 386  VVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLL 445
             +  A+  +F+V   S       S     + C++    + H  Y R  F    S+++WLL
Sbjct: 1116 TL--AVGVIFKVNGDS-------SERGVRISCNIFICNKLHCSYSR-PFLPSKSEYMWLL 1165



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 140/284 (49%), Gaps = 29/284 (10%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++  +L +LYL +  ++  +  S+  L  L +L L GC NL  LP     L+ LR L L
Sbjct: 656 FSAASNLEELYLINCKNLGMIDKSVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLNL 715

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C KL+K P   A+  +L +LYL + T++  +  S+  L  L +L L+ C NL +LP+S
Sbjct: 716 SHCKKLEKIPDFSAA-SNLEELYLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTS 774

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
              L SL+ LNLS C KLE +PD L    +L+ L +   T +R    S+  +  L  +  
Sbjct: 775 YYKLWSLQYLNLSYCKKLEKIPD-LSAASNLQSLCLHECTNLRLIHESVGSLYKLIDMDL 833

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           SGC                 L K        LP+   + SL  L LS+C   E + PS  
Sbjct: 834 SGCTN---------------LAK--------LPTYLRLKSLRYLGLSECCKLE-SFPSIA 869

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           +N+ SL+EL ++      LP+SI  L  L  L L  C  L SLP
Sbjct: 870 ENMESLRELDMDFTAIKELPSSIGYLTQLYRLNLTGCTNLISLP 913



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 23/297 (7%)

Query: 14  GTSITEVPSSIELLT--GLELLTLKGC---KNLSSLPVTISSLKC----------LRTLE 58
            T I  +P S++ +   G    TL  C   KNL  L +  S +K           L+ ++
Sbjct: 584 STKIEYLPDSLKWIKWHGFPQPTLPSCFITKNLVGLDLQYSFMKTFGKRLEDCKRLKHVD 643

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
           LS  + L+K P   A+  +L +LYL +  ++  +  S+  L  L +L L  C NL +LP 
Sbjct: 644 LSHSTFLEKIPNFSAA-SNLEELYLINCKNLGMIDKSVFSLDKLTILNLAGCSNLKKLPR 702

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSLY 176
               L+SL+ LNLS C KLE +PD      +LEEL + + T +R    S+F +  L  L 
Sbjct: 703 GYFILRSLRYLNLSHCKKLEKIPD-FSAASNLEELYLFNCTNLRMIDKSVFSLHKLTILN 761

Query: 177 FSGC-NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
              C N      S++       L  S C     +P L+   +L  L L +C      I  
Sbjct: 762 LDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIPDLSAASNLQSLCLHECT-NLRLIHE 820

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            + +L+ L ++ L+   N   LP  +  L +L  L L +C +L+S P I  N++ +R
Sbjct: 821 SVGSLYKLIDMDLSGCTNLAKLPTYLR-LKSLRYLGLSECCKLESFPSIAENMESLR 876



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 1/127 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + T++R +  ++  L+ L+ + L+GC NL +LP T   LK L  L LS   K   FP 
Sbjct: 809 LHECTNLRLIHESVGSLYKLIDMDLSGCTNLAKLP-TYLRLKSLRYLGLSECCKLESFPS 867

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           I  + + L E+ ++ TAI+ LP+SI  L+     NL  C NL SLP+TI  LR+L  +  
Sbjct: 868 IAENMESLRELDMDFTAIKELPSSIGYLTQLYRLNLTGCTNLISLPNTIYLLRNLDKLLL 927

Query: 784 SGCSKLK 790
           SGCS+ +
Sbjct: 928 SGCSRFE 934



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 5/128 (3%)

Query: 671 RELSLAIELLFGLVQLT---LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + L +  + +F L +LT   L GC NL++LPR    L+ L  LNLS   K  + P+ +++
Sbjct: 671 KNLGMIDKSVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLNLSHCKKLEKIPDFSAA 730

Query: 728 RDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            + L E++L   T +R +  S+  L    + NL  C NLK LP++   L SL+ +  S C
Sbjct: 731 SN-LEELYLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYC 789

Query: 787 SKLKNVTE 794
            KL+ + +
Sbjct: 790 KKLEKIPD 797



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + T++R +  ++  L  L  L L+ C NL++LP +   L  L  LNLS   K  + P+
Sbjct: 738 LFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIPD 797

Query: 724 ITSSRD-QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           ++++ + Q L +H E T +R +  S+  L   I  +L  C NL  LP+ +  L+SLR + 
Sbjct: 798 LSAASNLQSLCLH-ECTNLRLIHESVGSLYKLIDMDLSGCTNLAKLPTYLR-LKSLRYLG 855

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQ--SAVETVTKLAKAEL 837
            S C KL++       +ESL          ++  DF  +++  S++  +T+L +  L
Sbjct: 856 LSECCKLESFPSIAENMESLR---------ELDMDFTAIKELPSSIGYLTQLYRLNL 903



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 612 GQFVKMISVD-SGCMSCYKKWGRQTVRRQSPQEPG--NCSRLWEEADEFPDIVQVLS--- 665
           G   K+I +D SGC +  K      +R +S +  G   C +L    + FP I + +    
Sbjct: 823 GSLYKLIDMDLSGCTNLAKL--PTYLRLKSLRYLGLSECCKL----ESFPSIAENMESLR 876

Query: 666 ----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREF 721
               D T I+EL  +I  L  L +L L GC NL  LP TI  L+ L  L LSG S+F  F
Sbjct: 877 ELDMDFTAIKELPSSIGYLTQLYRLNLTGCTNLISLPNTIYLLRNLDKLLLSGCSRFEMF 936

Query: 722 PE 723
           P 
Sbjct: 937 PH 938


>gi|359486092|ref|XP_002274052.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 919

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 26/292 (8%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + M +L  L+L+G  S+ ++  S+  L  L  L+L+ C  L +LP +I  L+ L  L L
Sbjct: 554 FSRMPNLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILNL 613

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S CSK +KFP    +M+ L KL+L  T+I ++P SI  L  LE+L L++C    + P   
Sbjct: 614 SYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKG 673

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             +KSL  L L     ++++PD++G +ESLE LDVSG+   +       MK+L  L    
Sbjct: 674 GNMKSLNQLLLRNTA-IKDLPDSIGDLESLESLDVSGSKFEKFPEKGGNMKSLNQLLL-- 730

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                 +  +  +  S+  + SL  LDLSDC   E   P    N
Sbjct: 731 ---------------------RNTAIKDLPDSIGDLESLESLDLSDCSKFE-KFPEKGGN 768

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           + SLK+L L       LP SI  L +LE L+L DC + +  P+   N++ +R
Sbjct: 769 MKSLKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLR 820



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 126/274 (45%), Gaps = 55/274 (20%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--------------------- 40
            +MK L  L+L  T+I ++P SI  L  LE+L L  C                       
Sbjct: 627 GNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLRN 686

Query: 41  --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
             +  LP +I  L+ L +L++SG SK +KFP+   +M+ L++L L  T+I ++P SI  L
Sbjct: 687 TAIKDLPDSIGDLESLESLDVSG-SKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDL 745

Query: 99  PGLELLYLNECKNLVR-----------------------LPSSINGLKSLKTLNLSGCCK 135
             LE L L++C    +                       LP SI  LKSL+ L+LS C K
Sbjct: 746 ESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSK 805

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            E  P+  G ++ L EL +  TAI+   ++I  +K L+ L  S C++       +     
Sbjct: 806 FEKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKLKRLVLSDCSDLWEGLISNQLCNL 865

Query: 196 NLLGKSSCPVA---LMLPSLTGVCSLTKLDLSDC 226
             L  S C +A   L+LPS     SL ++D   C
Sbjct: 866 QKLNISQCKMAGQILVLPS-----SLEEIDAYHC 894



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 36/255 (14%)

Query: 68  FPQIVASMEDLSKLYLDGTSIAE---VPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           F + + + EDL +L +   S +      S    +P LE L+LN C +L+ +  S+  LK 
Sbjct: 524 FERALTAYEDLERLKVIDLSYSRKLIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGNLKK 583

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVS------------------------GTAIR 160
           L TL+L  C KL+N+PD++  +ESLE L++S                         TAI+
Sbjct: 584 LTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIK 643

Query: 161 RPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
               SI  +++L  L  S C++    P    +       N L   +  +  +  S+  + 
Sbjct: 644 DLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMK---SLNQLLLRNTAIKDLPDSIGDLE 700

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           SL  LD+S  G      P    N+ SL +L L       LP SI  L +LE L+L DC +
Sbjct: 701 SLESLDVS--GSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSK 758

Query: 277 LQSLPQIPPNLQFVR 291
            +  P+   N++ ++
Sbjct: 759 FEKFPEKGGNMKSLK 773



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 36/206 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA--------------- 676
           G + VR + P EP   SRLW+  D F   +    D   ++ + L+               
Sbjct: 500 GWEIVREKFPDEPNKWSRLWDPCD-FERALTAYEDLERLKVIDLSYSRKLIQMSEFSRMP 558

Query: 677 -IELLF------------------GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSK 717
            +E LF                   L  L+L  C  L+ LP +I  L+ L  LNLS  SK
Sbjct: 559 NLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSK 618

Query: 718 FREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRS 777
           F +FP    +   L ++HL+ TAI+ LP SI  L    + +L DC   +  P     ++S
Sbjct: 619 FEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKS 678

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLE 803
           L  +     + +K++ +++G +ESLE
Sbjct: 679 LNQLLLRNTA-IKDLPDSIGDLESLE 703



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L +L+LS  SKF +FPE   +   L ++ L  TAI+ LP SI  L  
Sbjct: 735 IKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKS 794

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMY---------PSGCSKLKNV 792
               +L DC   +  P     ++ LR ++         P+  S+LK +
Sbjct: 795 LEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKL 842



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 23/137 (16%)

Query: 652 EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER--------------- 696
           E+      + Q+L   T I++L  +I  L  L  L L+ C   E+               
Sbjct: 717 EKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLR 776

Query: 697 --------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI 748
                   LP +I  LK L  L+LS  SKF +FPE   +  +L E+HL+ TAI+ LP +I
Sbjct: 777 LRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNI 836

Query: 749 ELLSGNILSNLKDCKNL 765
             L       L DC +L
Sbjct: 837 SRLKKLKRLVLSDCSDL 853



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 9/160 (5%)

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC----NEPPASASW 189
           C  E        +E L+ +D+S +      S    M NL SL+ +GC    +  P+  + 
Sbjct: 522 CDFERALTAYEDLERLKVIDLSYSRKLIQMSEFSRMPNLESLFLNGCVSLIDIHPSVGNL 581

Query: 190 HLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                   L   SC     LP S+  + SL  L+LS C   E   P    N+ SL++L+L
Sbjct: 582 K---KLTTLSLRSCDKLKNLPDSIWDLESLEILNLSYCSKFE-KFPGKGGNMKSLRKLHL 637

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
                  LP SI  L +LE L+L DC + +  P+   N++
Sbjct: 638 KDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEKGGNMK 677


>gi|356545124|ref|XP_003540995.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1116

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 230/525 (43%), Gaps = 49/525 (9%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
             + +PSS +    +EL+      N+  L   I  L  LR L+LS    L K P     + 
Sbjct: 626  FSNLPSSFQPDKLVELILQHS--NIKKLWKGIKYLPNLRALDLSDSKNLIKVPDF-RGVP 682

Query: 77   DLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            +L  + L+G T +A +  S+ LL  L  L L  CKNLV LP++I GL SL+ LN+SGC K
Sbjct: 683  NLEWIILEGCTKLAWIHPSVGLLRKLAFLNLKNCKNLVSLPNNILGLSSLEYLNISGCPK 742

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLYFSGCNEPPASASWHLHLP 194
            +                  S   +  P +  + ++ N+R       +   +     +   
Sbjct: 743  I-----------------FSNQLLENPINEEYSMIPNIRETAMQSQSTSSSIIKRFIPFH 785

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
            F+    S      +LPSL     L  LDLS C L +  IP  I ++ SL+ L L  N FV
Sbjct: 786  FSYSRGSKNSGGCLLPSLPSFSCLHDLDLSFCNLSQ--IPDAIGSILSLETLNLGGNKFV 843

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
            +LP++I+ L  L  L LE CK+L+ LP++P         G  S       L        I
Sbjct: 844  SLPSTINKLSKLVHLNLEHCKQLRYLPEMPTPTALPVIRGIYSFAHYGRGL-------II 896

Query: 315  INCIDSLKLLRKNGLAISMLREYLEL-QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
             NC   + + R  G+A S L + L++ Q  + P   + I+ PG+QIP+WF  +  G+SI+
Sbjct: 897  FNCPKIVDIERCRGMAFSWLLQILQVSQESATPIGWIDIIVPGNQIPRWFNNRCVGNSIS 956

Query: 374  VTRPSYLYNVNKVVGFAICCVFQVPKHSTG-TYLFHSYPAHELEC-SMDGSGEGHY--IY 429
            +  PS +   N  +G A   VF V    T     + S  +   E  S    G   Y  I 
Sbjct: 957  LD-PSPIMLDNNWIGIACSVVFVVFDDPTSLDNDWKSSISIGFETKSYSSRGSPLYIPIL 1015

Query: 430  FRGKFGHVVSDHLWLLFLPRHGHNWQFES----NLIRLSFRSISDPT----WKVKRCGFH 481
                   V   HLWLL+L R      F+     +L  +   ++ D +     +V  CG+ 
Sbjct: 1016 LDRNLVTVKLHHLWLLYLTRGEFFSYFKIEKMLDLYGIKMHAMVDNSQGLHLEVCSCGYQ 1075

Query: 482  PIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGS 526
             ++  +++  + T     R    N+  V  DFV     ++  +GS
Sbjct: 1076 WVFEEDLQNLNPTI---MRRGYSNI-PVDDDFVNGGSILSLEAGS 1116



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L    N+++L + I  L  L  L+LS      + P+     + L  I LEG T +
Sbjct: 638 LVELILQH-SNIKKLWKGIKYLPNLRALDLSDSKNLIKVPDFRGVPN-LEWIILEGCTKL 695

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             +  S+ LL      NLK+CKNL SLP+ I GL SL  +  SGC K+
Sbjct: 696 AWIHPSVGLLRKLAFLNLKNCKNLVSLPNNILGLSSLEYLNISGCPKI 743



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 13/184 (7%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEAD--EFPDIVQVLSDGTDIRELSLAIELLFGLVQL 686
           K  GR+ V+  SP EP   SRLW   D  +     +  ++   + ++S  + +L  +   
Sbjct: 528 KVLGRKIVKGNSPNEPRKWSRLWLPKDFYDMSKTTETTNNEAIVLDMSREMGILMTIEAE 587

Query: 687 TLNGCKNLERLPRTISALKYLSTLN-----LSGLSKFR-EFPEITSS--RDQLLEIHLEG 738
            L+   NL  L   +  +K++  L+     L  L  F+  F  + SS   D+L+E+ L+ 
Sbjct: 588 ALSKMSNLRLL--ILHDVKFMGNLDCLSNKLQFLQWFKYPFSNLPSSFQPDKLVELILQH 645

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + I+ L   I+ L      +L D KNL  +P    G+ +L  +   GC+KL  +  ++G 
Sbjct: 646 SNIKKLWKGIKYLPNLRALDLSDSKNLIKVPD-FRGVPNLEWIILEGCTKLAWIHPSVGL 704

Query: 799 VESL 802
           +  L
Sbjct: 705 LRKL 708



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 78/189 (41%), Gaps = 18/189 (9%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  + L+G T +  +  S+ LL  L  L LK CKNL SLP  I  L  L  L +SGC K
Sbjct: 683 NLEWIILEGCTKLAWIHPSVGLLRKLAFLNLKNCKNLVSLPNNILGLSSLEYLNISGCPK 742

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSI------ELLPGLELLYLNECKN-----LV 113
           +     +   + +   +  +    A    S         +P     Y    KN     L 
Sbjct: 743 IFSNQLLENPINEEYSMIPNIRETAMQSQSTSSSIIKRFIP-FHFSYSRGSKNSGGCLLP 801

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            LPS       L  L+LS  C L  +PD +G + SLE L++ G       S+I  +  L 
Sbjct: 802 SLPS----FSCLHDLDLS-FCNLSQIPDAIGSILSLETLNLGGNKFVSLPSTINKLSKLV 856

Query: 174 SLYFSGCNE 182
            L    C +
Sbjct: 857 HLNLEHCKQ 865


>gi|449447729|ref|XP_004141620.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 838

 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/281 (39%), Positives = 155/281 (55%), Gaps = 39/281 (13%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSL--PVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           + +V SSI  L  L LL ++GC +  S   PVT  SLK   TL LS C  L+ FP+    
Sbjct: 433 LNKVHSSINSLHRLILLDMEGCVSFRSFSFPVTCKSLK---TLVLSNCG-LEFFPEFGCV 488

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++L++DGTSI ++  SI  L GL LL L  C  L  LP+ I  L SLKTL L+GC 
Sbjct: 489 MGYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCK 548

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L+ +P  L  V+ LEELD+ GT+I    S+I  ++NLR L    C E   S  WH    
Sbjct: 549 NLDKIPPCLRYVKHLEELDIGGTSI----STIPFLENLRIL---NC-ERLKSNIWH---- 596

Query: 195 FNLLGKSSCPVALMLPSLTGVC-----SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                           SL G+      SL  L+LSDC L +  IP+D++   SL+ L L+
Sbjct: 597 ----------------SLAGLAAQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDLS 640

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
            N+F  L  SI  L+NL+ L L DC +L+ +P++P ++++V
Sbjct: 641 SNHFERLSESIKQLINLKVLYLNDCNKLKQVPKLPKSIKYV 681



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 103/189 (54%), Gaps = 20/189 (10%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++L++DGTSI ++  SI  L GL LL L+ C  LSSLP  I  L  L+TL L+GC 
Sbjct: 489 MGYLTELHIDGTSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCK 548

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI---- 119
            L K P  +  ++ L +L + GTSI+ +P     L  L +L      N  RL S+I    
Sbjct: 549 NLDKIPPCLRYVKHLEELDIGGTSISTIP----FLENLRIL------NCERLKSNIWHSL 598

Query: 120 -----NGLKSLKTLNLSGCCKL-ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
                  L+SL  LNLS C  + E++P+ L    SLE LD+S     R + SI  + NL+
Sbjct: 599 AGLAAQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDLSSNHFERLSESIKQLINLK 658

Query: 174 SLYFSGCNE 182
            LY + CN+
Sbjct: 659 VLYLNDCNK 667



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 27/185 (14%)

Query: 644 PG-NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFG--LVQLTLNGCKNLERLPRT 700
           PG N  RLW     F ++ ++  D +D + L           L +L L  C  L ++  +
Sbjct: 382 PGSNVERLWNGTQNFKNLKEI--DASDSKFLVETPNFSEAPKLRRLILRNCGRLNKVHSS 439

Query: 701 ISALKYLSTLNLSGLSKFREF----------------------PEITSSRDQLLEIHLEG 738
           I++L  L  L++ G   FR F                      PE       L E+H++G
Sbjct: 440 INSLHRLILLDMEGCVSFRSFSFPVTCKSLKTLVLSNCGLEFFPEFGCVMGYLTELHIDG 499

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T+I  L  SI  L G +L NL++C  L SLP+ I  L SL+ +  +GC  L  +   L  
Sbjct: 500 TSINKLSPSITNLLGLVLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLDKIPPCLRY 559

Query: 799 VESLE 803
           V+ LE
Sbjct: 560 VKHLE 564


>gi|357516579|ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355522600|gb|AET03054.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 198/455 (43%), Gaps = 93/455 (20%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPV-------------- 46
            +  +K L  L  D T+I ++P SI  LT LE L L  C  L  LP               
Sbjct: 547  IGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDSCLYLRRLPNCIGKLCSLLELSLN 606

Query: 47   ---------TISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                     T+  LK L  L L GC  L   P  + ++E L++L    + I E+PS+I  
Sbjct: 607  HSGLQELHNTVGFLKSLEKLSLIGCKSLTLMPDSIGNLESLTELLASNSGIKELPSTIGS 666

Query: 98   LPGLELLYLNECKNLVRLPSS-----------------------INGLKSLKTLNLSGCC 134
            L  L +L + +CK L +LP S                       I  LK L+ L +  CC
Sbjct: 667  LSYLRILSVGDCKLLNKLPDSFKNLASIIELKLDGTSIRYLPDQIGELKQLRKLEIGNCC 726

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASAS--- 188
             LE++P+++G++ SL  L++    IR   +SI L++NL +L  + C    + PAS     
Sbjct: 727  NLESLPESIGQLASLTTLNIVNGNIRELPASIGLLENLVTLTLNQCKMLKQLPASVGNLK 786

Query: 189  --WHL--------HLP--FNLLGKSSCPVALMLPSL--------------TGVCSLTKL- 221
               HL         LP  F +L +         P L              +  C+LT L 
Sbjct: 787  SLCHLMMMGTAMSDLPESFGMLSRLRTLRMAKNPDLVSKYAENTDSFVIPSSFCNLTLLS 846

Query: 222  DLSDCGLG-EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
            +L  C       IP + + L  LK L L +NNF +LP+S+ GL  L+EL L +C  L SL
Sbjct: 847  ELDACAWRLSGKIPDEFEKLSLLKTLNLGQNNFHSLPSSLKGLSILKELSLPNCTELISL 906

Query: 281  PQIPPNLQFVRANGCSSLVTL--------FGALKLCRSKYTI----INCIDSLKLLRKNG 328
            P +P +L  + A+ C +L T+           LKL   K  I    + C+ SL+ L  +G
Sbjct: 907  PSLPSSLIMLNADNCYALETIHDMSNLESLEELKLTNCKKLIDIPGLECLKSLRRLYLSG 966

Query: 329  LAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWF 363
                  +    L  V     + ++  PG+++P+W 
Sbjct: 967  CNACSSKVCKRLSKVVLRNFQ-NLSMPGTKLPEWL 1000



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 142/306 (46%), Gaps = 38/306 (12%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
           C+NL  LP  +S LK L +L LS CSKLK  P+ +  ++ L  L  D T+I ++P SI  
Sbjct: 513 CENLIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFR 572

Query: 98  LPGLELLYLNECKNLVRLPSSING-----------------------LKSLKTLNLSGCC 134
           L  LE L L+ C  L RLP+ I                         LKSL+ L+L GC 
Sbjct: 573 LTKLERLVLDSCLYLRRLPNCIGKLCSLLELSLNHSGLQELHNTVGFLKSLEKLSLIGCK 632

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPAS-ASWH 190
            L  +PD++G +ESL EL  S + I+   S+I  +  LR L    C   N+ P S  +  
Sbjct: 633 SLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRILSVGDCKLLNKLPDSFKNLA 692

Query: 191 LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             +   L G S       LP   G +  L KL++ +C   E ++P  I  L SL  L + 
Sbjct: 693 SIIELKLDGTS----IRYLPDQIGELKQLRKLEIGNCCNLE-SLPESIGQLASLTTLNIV 747

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGA 304
             N   LPASI  L NL  L L  CK L+ LP    NL+      +     S L   FG 
Sbjct: 748 NGNIRELPASIGLLENLVTLTLNQCKMLKQLPASVGNLKSLCHLMMMGTAMSDLPESFGM 807

Query: 305 LKLCRS 310
           L   R+
Sbjct: 808 LSRLRT 813



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 139/326 (42%), Gaps = 68/326 (20%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLK--------KFPQIVASMEDLSKLYLDGTSIA 89
           C +L++LP      + L  L+LS   K+K        K P+ +  M +LS  Y     +A
Sbjct: 422 CIHLNTLP------RELAVLDLSNGEKIKSLWGLKSHKVPETLMVM-NLSDCY----QLA 470

Query: 90  EVPSSIELLPGLELLYLNECKNLVR------------------------LPSSINGLKSL 125
            +P  +    GLE + L  C NL R                        LPS ++GLK L
Sbjct: 471 AIPD-LSWCLGLEKINLVNCINLTRIHESIGSLTTLLNLNLTRCENLIELPSDVSGLKHL 529

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
           ++L LS C KL+ +P+ +G ++SL+ L    TAI +   SIF +  L  L    C     
Sbjct: 530 ESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDSC----- 584

Query: 186 SASWHLHLPFNLLGKSSCPVALML---------PSLTGVCSLTKLDLSDCGLGEAAIPSD 236
               +L    N +GK    + L L          ++  + SL KL L  C      +P  
Sbjct: 585 ---LYLRRLPNCIGKLCSLLELSLNHSGLQELHNTVGFLKSLEKLSLIGCK-SLTLMPDS 640

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV---RAN 293
           I NL SL EL  + +    LP++I  L  L  L + DCK L  LP    NL  +   + +
Sbjct: 641 IGNLESLTELLASNSGIKELPSTIGSLSYLRILSVGDCKLLNKLPDSFKNLASIIELKLD 700

Query: 294 GCS--SLVTLFGALKLCRSKYTIINC 317
           G S   L    G LK  R K  I NC
Sbjct: 701 GTSIRYLPDQIGELKQLR-KLEIGNC 725



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 29/165 (17%)

Query: 645 GNCSRLWEEADEFPDIVQVLS---DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           G+C  L +  D F ++  ++    DGT IR L   I  L  L +L +  C NLE LP +I
Sbjct: 676 GDCKLLNKLPDSFKNLASIIELKLDGTSIRYLPDQIGELKQLRKLEIGNCCNLESLPESI 735

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
             L  L+TLN+                            IR LPASI LL   +   L  
Sbjct: 736 GQLASLTTLNIV------------------------NGNIRELPASIGLLENLVTLTLNQ 771

Query: 762 CKNLKSLPSTINGLRSL--RMMYPSGCSKLKNVTETLGKVESLEV 804
           CK LK LP+++  L+SL   MM  +  S L      L ++ +L +
Sbjct: 772 CKMLKQLPASVGNLKSLCHLMMMGTAMSDLPESFGMLSRLRTLRM 816



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 23/132 (17%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNL-----------------------ERLPRTISALKY 706
           ++EL   +  L  L +L+L GCK+L                       + LP TI +L Y
Sbjct: 610 LQELHNTVGFLKSLEKLSLIGCKSLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSY 669

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L  L++       + P+   +   ++E+ L+GT+IR LP  I  L       + +C NL+
Sbjct: 670 LRILSVGDCKLLNKLPDSFKNLASIIELKLDGTSIRYLPDQIGELKQLRKLEIGNCCNLE 729

Query: 767 SLPSTINGLRSL 778
           SLP +I  L SL
Sbjct: 730 SLPESIGQLASL 741



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 1/113 (0%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
           C+NL  LP  +S LK+L +L LS  SK +  PE       L  +  + TAI  LP SI  
Sbjct: 513 CENLIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFR 572

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           L+      L  C  L+ LP+ I  L SL +      S L+ +  T+G ++SLE
Sbjct: 573 LTKLERLVLDSCLYLRRLPNCIGKLCSL-LELSLNHSGLQELHNTVGFLKSLE 624



 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 82/189 (43%), Gaps = 48/189 (25%)

Query: 643 EPGNCSRLWEEADEFPDIVQVLSDGT-------DIRELSLAIELLFGLVQLTLNGCKNLE 695
           E GNC  L    +  P+ +  L+  T       +IREL  +I LL  LV LTLN CK L+
Sbjct: 721 EIGNCCNL----ESLPESIGQLASLTTLNIVNGNIRELPASIGLLENLVTLTLNQCKMLK 776

Query: 696 RLPRTISALKYLSTLNLSG------------LSKFREFPEITSSRDQLLEIHLEGTAIRG 743
           +LP ++  LK L  L + G            LS+ R      +    L+  + E T    
Sbjct: 777 QLPASVGNLKSLCHLMMMGTAMSDLPESFGMLSRLRTLR--MAKNPDLVSKYAENTDSFV 834

Query: 744 LPASI-------EL------LSGNI------LSNLKDC----KNLKSLPSTINGLRSLRM 780
           +P+S        EL      LSG I      LS LK       N  SLPS++ GL  L+ 
Sbjct: 835 IPSSFCNLTLLSELDACAWRLSGKIPDEFEKLSLLKTLNLGQNNFHSLPSSLKGLSILKE 894

Query: 781 MYPSGCSKL 789
           +    C++L
Sbjct: 895 LSLPNCTEL 903


>gi|227438183|gb|ACP30581.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1232

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 152/314 (48%), Gaps = 42/314 (13%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  LYL GTSI E+PS + L + L +L L+ CK L  +P+ +S+L  L  L LSGCS+L
Sbjct: 728 NLKKLYLGGTSIQELPSLVHL-SELVVLDLENCKQLQKIPLRLSTLTSLAVLNLSGCSEL 786

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           +    +     +L +LYL GT+I EVPSSI  L  L +L L  CK L RLP  I+ LKSL
Sbjct: 787 EDIEDLNLP-RNLEELYLAGTAIQEVPSSITYLSELVILDLQNCKRLRRLPMEISNLKSL 845

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
            TL L                                   +F ++   S   S  NE   
Sbjct: 846 VTLKL---------------------------------PRLFTVETGMSNLISAFNE--N 870

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
                 +LP   L  SS  +  ++P    + S     LS C      IP +I +L ++  
Sbjct: 871 VCQRQDYLPQPRLLPSSRLLHGLVPRFYALVS-----LSLCNASLMHIPEEICSLATVTV 925

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL 305
           L L+RN F  +P SI  L  L  L L  C+ L+SLP++P +L+ +  +GC SL ++  A 
Sbjct: 926 LDLSRNGFRKIPESIKQLCKLHSLRLRHCRNLRSLPELPQSLKILNVHGCVSLESVSWAS 985

Query: 306 KLCRSKYTIINCID 319
           +   S YT  NC +
Sbjct: 986 EQFPSHYTFNNCFN 999



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 71/112 (63%), Gaps = 2/112 (1%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I+EL   + L   LV L L  CK L+++P  +S L  L+ LNLSG S+  +  ++  
Sbjct: 736 GTSIQELPSLVHL-SELVVLDLENCKQLQKIPLRLSTLTSLAVLNLSGCSELEDIEDLNL 794

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
            R+ L E++L GTAI+ +P+SI  LS  ++ +L++CK L+ LP  I+ L+SL
Sbjct: 795 PRN-LEELYLAGTAIQEVPSSITYLSELVILDLQNCKRLRRLPMEISNLKSL 845



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 81/189 (42%), Gaps = 57/189 (30%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL----- 59
           ++L +LYL GT+I EVPSSI  L+ L +L L+ CK L  LP+ IS+LK L TL+L     
Sbjct: 796 RNLEELYLAGTAIQEVPSSITYLSELVILDLQNCKRLRRLPMEISNLKSLVTLKLPRLFT 855

Query: 60  --------------SGCSKLKKFPQI---------------------------------- 71
                         + C +    PQ                                   
Sbjct: 856 VETGMSNLISAFNENVCQRQDYLPQPRLLPSSRLLHGLVPRFYALVSLSLCNASLMHIPE 915

Query: 72  -VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            + S+  ++ L L      ++P SI+ L  L  L L  C+NL  LP      +SLK LN+
Sbjct: 916 EICSLATVTVLDLSRNGFRKIPESIKQLCKLHSLRLRHCRNLRSLPELP---QSLKILNV 972

Query: 131 SGCCKLENV 139
            GC  LE+V
Sbjct: 973 HGCVSLESV 981



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 63/105 (60%), Gaps = 1/105 (0%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G K L+    + S + YL  L +  LS+  E  +I    + L +++L GT+I+ LP+ + 
Sbjct: 688 GHKFLDLEDSSESIMVYLEQLKVLDLSRCIELEDIQVIPNNLKKLYLGGTSIQELPSLVH 747

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L S  ++ +L++CK L+ +P  ++ L SL ++  SGCS+L+++ +
Sbjct: 748 L-SELVVLDLENCKQLQKIPLRLSTLTSLAVLNLSGCSELEDIED 791



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 67/181 (37%), Gaps = 57/181 (31%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL----------- 715
           GT I+E+  +I  L  LV L L  CK L RLP  IS LK L TL L  L           
Sbjct: 805 GTAIQEVPSSITYLSELVILDLQNCKRLRRLPMEISNLKSLVTLKLPRLFTVETGMSNLI 864

Query: 716 SKFRE-------------------------------------------FPEITSSRDQLL 732
           S F E                                            PE   S   + 
Sbjct: 865 SAFNENVCQRQDYLPQPRLLPSSRLLHGLVPRFYALVSLSLCNASLMHIPEEICSLATVT 924

Query: 733 EIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            + L     R +P SI+ L       L+ C+NL+SLP      +SL+++   GC  L++V
Sbjct: 925 VLDLSRNGFRKIPESIKQLCKLHSLRLRHCRNLRSLPELP---QSLKILNVHGCVSLESV 981

Query: 793 T 793
           +
Sbjct: 982 S 982



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 112/310 (36%), Gaps = 95/310 (30%)

Query: 84  DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
           +GT   E+   I+L    +L+ + E +N           ++++ ++L GC +LE   DT 
Sbjct: 582 EGTKELEMLKRIKLCHSRKLVDIQELQNA----------RNIEVIDLQGCTRLERFIDT- 630

Query: 144 GKVESLEELDVSG---------------------TAIR---------------------- 160
           G    L  +++SG                     TAIR                      
Sbjct: 631 GHFHHLRVINLSGCINIKVFPKVPPKIEELYLKQTAIRSIPNVTLSSKDNSFSYDHGGHK 690

Query: 161 ------RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
                    S +  ++ L+ L  S C E         +L    LG +S      LPSL  
Sbjct: 691 FLDLEDSSESIMVYLEQLKVLDLSRCIELEDIQVIPNNLKKLYLGGTSIQ---ELPSLVH 747

Query: 215 VCSLTKLDLSDC----------------------GLGEAAIPSDIDNLHSLKELYLNRNN 252
           +  L  LDL +C                      G  E     D++   +L+ELYL    
Sbjct: 748 LSELVVLDLENCKQLQKIPLRLSTLTSLAVLNLSGCSELEDIEDLNLPRNLEELYLAGTA 807

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ----------FVRANGCSSLVTLF 302
              +P+SI+ L  L  L+L++CKRL+ LP    NL+          F    G S+L++ F
Sbjct: 808 IQEVPSSITYLSELVILDLQNCKRLRRLPMEISNLKSLVTLKLPRLFTVETGMSNLISAF 867

Query: 303 GALKLCRSKY 312
                 R  Y
Sbjct: 868 NENVCQRQDY 877


>gi|297741883|emb|CBI33318.3| unnamed protein product [Vitis vinifera]
          Length = 1333

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 198/460 (43%), Gaps = 104/460 (22%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL  LP +I  LK L+ L+ +GC KLE  P+  G +  L  LD+SGT
Sbjct: 489 VPNLEILILIGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGT 548

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH-LPFNLLGKSSCPVALMLPSLTGVC 216
           AI    SSI  +  L++L    C++        LH +P ++   SS  V           
Sbjct: 549 AIMDLPSSITHLNGLQTLLLQECSK--------LHKIPIHICHLSSLEV----------- 589

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
               LDL  C + E  IPSDI +L SL++L L R +F ++P +I+ L +LE L L  C  
Sbjct: 590 ----LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNN 645

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE 336
           L+ + ++P  L+ + A+G +   +    L L    ++++NC    +  +      S    
Sbjct: 646 LEQITELPSCLRLLDAHGSNRTSSRAPFLPL----HSLVNCFRWAQDWKHTSFRDS---- 697

Query: 337 YLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
                  S  G    IV PGS  IP+W + + +  S  +  P   +  N+ +GFAICCV+
Sbjct: 698 -------SYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIELPQNWHQNNEFLGFAICCVY 750

Query: 396 --------QVPK-----------------HSTGTY--------LFHSYPAHE-------- 414
                    +P+                  ST ++        +  S+  +E        
Sbjct: 751 VPLSDESEDIPEKESAHGPENESDNKSEDESTHSWENERDDKSVAESFHKNEHKHTHSCR 810

Query: 415 LECSMDGSGEGHYIYF----------------RGKFGHVVSDHLWLL-----FLPRHGHN 453
           LEC +   G+     F                +G+    VS   W++      +P   H+
Sbjct: 811 LECFLGALGDSFDFQFVDRPGFQSTCFCYKEDKGEDNESVSGQTWVVCYSKAAIPEMFHS 870

Query: 454 WQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDE 493
           +Q    L R  F   S+   KVK CG   IY  ++++  E
Sbjct: 871 YQLTDILAR--FHIYSEKALKVKECGVRLIYSQDLQQSHE 908



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 126/251 (50%), Gaps = 48/251 (19%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP     L  L+ L L+ CKNL+SLP +I   K L TL  SGCS+L+  P+I+ 
Sbjct: 932  GSDMNEVPIIGNPLE-LDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQ 990

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KL L GT+I E+PSSI+ L GL+ L L+ CKNLV LP SI  L SLK L +  C
Sbjct: 991  DMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESC 1050

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
               + +PD LG+++SL  L V       P  S+                           
Sbjct: 1051 PSFKKLPDNLGRLQSLLHLSVG------PLDSM--------------------------- 1077

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                           LPSL+G+CSL +L+L  C + E  IPS+I  L SL  + ++    
Sbjct: 1078 ------------NFQLPSLSGLCSLRQLELQACNIRE--IPSEICYLSSLMPITVHPWKI 1123

Query: 254  VTLPASISGLL 264
              +    SGLL
Sbjct: 1124 YPVNQIYSGLL 1134



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 88/153 (57%), Gaps = 1/153 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+L L GC NL  LP  I  LK L+ L  +GCSKL++FP+I  +M  L  L L GT+I 
Sbjct: 492 LEILILIGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 551

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVES 148
           ++PSSI  L GL+ L L EC  L ++P  I  L SL+ L+L  C  +E  +P  +  + S
Sbjct: 552 DLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSS 611

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L++L++         ++I  + +L  L  S CN
Sbjct: 612 LQKLNLERGHFSSIPTTINQLSSLEVLNLSHCN 644



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 192/451 (42%), Gaps = 83/451 (18%)

Query: 85   GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLG 144
            G+ + EVP     L  L+ L L +CKNL  LPSSI G KSL TL+ SGC +LE++P+ L 
Sbjct: 932  GSDMNEVPIIGNPLE-LDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQ 990

Query: 145  KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
             +ESL +L +SGTAI+   SSI  ++ L+ L  S C               NL+      
Sbjct: 991  DMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCK--------------NLVN----- 1031

Query: 205  VALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY---LNRNNFVTLPASI 260
                LP S+  + SL  L +  C      +P ++  L SL  L    L+  NF  LP S+
Sbjct: 1032 ----LPESICNLTSLKFLIVESCP-SFKKLPDNLGRLQSLLHLSVGPLDSMNF-QLP-SL 1084

Query: 261  SGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL------FGALKLCRSKYTI 314
            SGL +L +LEL+ C    ++ +IP  + ++     SSL+ +         +    S    
Sbjct: 1085 SGLCSLRQLELQAC----NIREIPSEICYL-----SSLMPITVHPWKIYPVNQIYSGLLY 1135

Query: 315  INCIDS-----LKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
             N ++S       +      +I  ++  + +Q         +     + IP+W  +Q  G
Sbjct: 1136 SNVLNSKFRYGFHISFNLSFSIDKIQRVIFVQGREFRRSVRTFFAESNGIPEWISHQKSG 1195

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS-----------------YPA 412
              IT+  P   Y  +  +GF +C ++   +  T T+   S                    
Sbjct: 1196 FKITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDSFLFDDLRLE 1255

Query: 413  HELECSM--DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISD 470
               EC    D S +G  +Y+        SD      +P   H+ ++ +     +      
Sbjct: 1256 QICECCYYEDASNQGLLVYYSK------SD------IPEKFHSNEWRTLNASFNVYFGIK 1303

Query: 471  PTWKVKRCGFHPIYMHEVEEFDETTKQSTRF 501
            P  K  RCGFH +Y H+ E+ + T  Q  + 
Sbjct: 1304 PV-KAARCGFHFLYAHDYEQNNLTMVQGKKL 1333



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ +    L  L  L L  CKNL  LP +I   K L+TL+ SG S+    PEI  
Sbjct: 932  GSDMNEVPIIGNPL-ELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQ 990

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L ++ L GTAI+ +P+SI+ L G     L +CKNL +LP +I  L SL+ +    C
Sbjct: 991  DMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESC 1050

Query: 787  SKLKNVTETLGKVESL 802
               K + + LG+++SL
Sbjct: 1051 PSFKKLPDNLGRLQSL 1066



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 535 GNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGH 594

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL---VRLPS 117
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL     LPS
Sbjct: 595 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPS 654

Query: 118 SINGLKS 124
            +  L +
Sbjct: 655 CLRLLDA 661



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 59/105 (56%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GC NLE LPR I  LK+L  L+ +G SK   FPEI  +  +L  + L GTAI  LP
Sbjct: 495 LILIGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLP 554

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           +SI  L+G     L++C  L  +P  I  L SL ++    C+ ++
Sbjct: 555 SSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIME 599



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L L GT+I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+ L + 
Sbjct: 989  LQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVE 1048

Query: 61   GCSKLKKFPQIVASMEDLSKLY---LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             C   KK P  +  ++ L  L    LD  +  ++P S+  L  L  L L  C N+  +PS
Sbjct: 1049 SCPSFKKLPDNLGRLQSLLHLSVGPLDSMNF-QLP-SLSGLCSLRQLELQAC-NIREIPS 1105

Query: 118  SINGLKSL 125
             I  L SL
Sbjct: 1106 EICYLSSL 1113



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 19/143 (13%)

Query: 647  CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    +  P+I+Q +         GT I+E+  +I+ L GL  L L+ CKNL  LP 
Sbjct: 979  CSQL----ESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPE 1034

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  L  L  L +     F++ P+       LL  HL    +  +   +  LSG  L +L
Sbjct: 1035 SICNLTSLKFLIVESCPSFKKLPDNLGRLQSLL--HLSVGPLDSMNFQLPSLSG--LCSL 1090

Query: 760  KDCK----NLKSLPSTINGLRSL 778
            +  +    N++ +PS I  L SL
Sbjct: 1091 RQLELQACNIREIPSEICYLSSL 1113


>gi|359473396|ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 192/431 (44%), Gaps = 80/431 (18%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL------------------- 41
            +  ++ L +L  + +++ E+P S   LT LE L+L  C+++                   
Sbjct: 808  IGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVRNLKLLTEFLMN 867

Query: 42   ----SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                + LP +I SL  L+ L +  C  L K P  +  +  +  L LDGTSI ++P  I  
Sbjct: 868  GSPVNELPASIGSLSNLKDLSVGHCRFLSKLPASIEGLASMVVLQLDGTSIMDLPDQIGG 927

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTL-----------------------NLSGCC 134
            L  L  L +  CK L  LP +I  + SL TL                       NL+ C 
Sbjct: 928  LKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCK 987

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            +L  +P ++G ++SL  L +  TA+R+   S  ++ +L  L  +    P      HL LP
Sbjct: 988  RLRRLPGSIGNLKSLHHLKMEETAVRQLPESFGMLTSLMRLLMA--KRP------HLELP 1039

Query: 195  FNL-------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
              L       LG       ++LP S + +  L +LD     +    IP D D L SL+ L
Sbjct: 1040 QALGPTETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKIS-GKIPDDFDKLSSLEIL 1098

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL----- 301
             L RNNF +LP+S+ GL  L +L L  C+ L++LP +P +L  V A  C +L  +     
Sbjct: 1099 NLGRNNFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANCYALEVISDLSN 1158

Query: 302  ---FGALKLCRSKYTI----INCIDSLKLLRKNGLA--ISMLREYLELQAVSDPGHKLSI 352
                  L L   K  +    + C+ SLK    +G +   S ++  L   A+ +    LSI
Sbjct: 1159 LESLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVKRRLSKVALKNL-RTLSI 1217

Query: 353  VFPGSQIPKWF 363
              PGS IP WF
Sbjct: 1218 --PGSNIPDWF 1226



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 139/269 (51%), Gaps = 30/269 (11%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + ++  SI  +  L  L L  CKNL   P  +S LK L+TL LSGCSKLK+ P+ ++ M+
Sbjct: 706 LVKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMK 765

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L +L LDGT I ++P S+  L  LE L LN C++L +LP+ I  L+SL+ L+ +    L
Sbjct: 766 SLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSA-L 824

Query: 137 ENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSG--CNEPPASASWHLHL 193
           E +PD+ G + +LE L +    +I     S+  +K L     +G   NE PA        
Sbjct: 825 EEIPDSFGSLTNLERLSLMRCQSIYAIPDSVRNLKLLTEFLMNGSPVNELPA-------- 876

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                            S+  + +L  L +  C    + +P+ I+ L S+  L L+  + 
Sbjct: 877 -----------------SIGSLSNLKDLSVGHCRF-LSKLPASIEGLASMVVLQLDGTSI 918

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQ 282
           + LP  I GL  L  LE+  CKRL+SLP+
Sbjct: 919 MDLPDQIGGLKTLRRLEMRFCKRLESLPE 947



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           +  L+ L L+ CKNL   P  +S LK L TL LSG SK +E PE  S    L E+ L+GT
Sbjct: 716 IISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGT 775

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            I  LP S+  L+     +L +C++LK LP+ I  L SLR +  +  S L+ + ++ G +
Sbjct: 776 VIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFND-SALEEIPDSFGSL 834

Query: 800 ESLEVRLS 807
            +LE RLS
Sbjct: 835 TNLE-RLS 841



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 40/274 (14%)

Query: 47  TISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP-GLELLY 105
           +  S+  LR L++       +F  + A   +L  L   G  +  +PS  +  P GL +L 
Sbjct: 598 SFESMINLRLLQIDNVQLEGEFKLMPA---ELKWLQWRGCPLKTLPS--DFCPQGLRVLD 652

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD-----------------------T 142
           L+E KN+ RL       ++L  +NL GCC L  +PD                       +
Sbjct: 653 LSESKNIERLWGESWVGENLMVMNLHGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKS 712

Query: 143 LGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNL 197
           +G + SL  LD+S     +  P S +  +KNL++L  SGC+   E P + S+   L   L
Sbjct: 713 IGDIISLLHLDLSECKNLVEFP-SDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELL 771

Query: 198 LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
           L  +   V   LP S+  +  L +L L++C      +P+ I  L SL+EL  N +    +
Sbjct: 772 LDGT---VIEKLPESVLRLTRLERLSLNNCQ-SLKQLPTCIGKLESLRELSFNDSALEEI 827

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
           P S   L NLE L L  C+ + ++P    NL+ +
Sbjct: 828 PDSFGSLTNLERLSLMRCQSIYAIPDSVRNLKLL 861



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 654  ADEFPDIVQVLSDGTDIR--------ELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
             +E P  +  LS+  D+         +L  +IE L  +V L L+G   ++ LP  I  LK
Sbjct: 871  VNELPASIGSLSNLKDLSVGHCRFLSKLPASIEGLASMVVLQLDGTSIMD-LPDQIGGLK 929

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             L  L +    +    PE   S   L  + +    +  LP SI  L   I+ NL  CK L
Sbjct: 930  TLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRL 989

Query: 766  KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSA 825
            + LP +I  L+SL  +     + ++ + E+ G + SL +RL    RP ++     + Q+ 
Sbjct: 990  RRLPGSIGNLKSLHHLKMEETA-VRQLPESFGMLTSL-MRLLMAKRPHLE-----LPQAL 1042

Query: 826  VETVTKLAKAE 836
              T TK+  AE
Sbjct: 1043 GPTETKVLGAE 1053



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 37/187 (19%)

Query: 647 CSRLWEEADEF---PDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L E  +       + ++L DGT I +L  ++  L  L +L+LN C++L++LP  I  
Sbjct: 751 CSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGK 810

Query: 704 LKYLSTL------------------NLSGLSKFR-----EFPEITSSRDQLLEIHLEGTA 740
           L+ L  L                  NL  LS  R       P+   +   L E  + G+ 
Sbjct: 811 LESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVRNLKLLTEFLMNGSP 870

Query: 741 IRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           +  LPASI       LSNLKD     C+ L  LP++I GL S+ ++   G S + ++ + 
Sbjct: 871 VNELPASI-----GSLSNLKDLSVGHCRFLSKLPASIEGLASMVVLQLDGTS-IMDLPDQ 924

Query: 796 LGKVESL 802
           +G +++L
Sbjct: 925 IGGLKTL 931


>gi|104647001|gb|ABF74124.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 200/454 (44%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP++  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPRVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IRR   SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRRAPWSIARLTRLQVLAIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL  L  L L+      +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWXLLXLDLSGXXXXXIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+ P   P  L  +  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQAXPXXXPXGLLXIXIHSCTSLVSISGCFNQYCLRKLVASNCXX 480

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
             +  +       ++   L+L++ + P H     FPGS IP  F +   G S+ +  P  
Sbjct: 481 LXQXXQI------LIHRNLKLES-AKPEHS---YFPGSDIPTCFNHXXMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 132/267 (49%), Gaps = 55/267 (20%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LEN+PDTL  + SLE L+VSG                        NE P  ++       
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPRVST------- 230

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FV 254
                                S+  L +S+  + E  IP+ I NL  L+ L ++ N    
Sbjct: 231 ---------------------SIEVLRISETSIEE--IPARICNLSQLRSLDISENKRLA 267

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           +LP SIS L +LE+L+L  C  L+S P
Sbjct: 268 SLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLEV 804
             + SLE 
Sbjct: 206 QNLTSLET 213



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPR 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 62/292 (21%)

Query: 5   KDLSDLYLDGTSITEVPSSI--ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + L  L  DG  +  +PS    E L  L +       NL  L   I  L+ L+ ++LS C
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCMSN----SNLEKLWDGIQPLRNLKKMDLSRC 57

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L + P       DLSK                    LE L L+ C++LV +  SI  L
Sbjct: 58  KYLVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNL 93

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN- 181
           K L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S    
Sbjct: 94  KGLSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKI 150

Query: 182 -EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P+S S           + SC              L KLD+SDC      +PS + +L
Sbjct: 151 EELPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHL 184

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            SLK L L+       LP ++  L +LE LE+  C  +   P++  +++ +R
Sbjct: 185 VSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVLR 236



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP EI  +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENI----GNLVA 326


>gi|298205195|emb|CBI17254.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 18/237 (7%)

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           MED+ +     T I E+PSS+E L  +  L+L++CKNL  L SSI   KS + L L+GC 
Sbjct: 1   MEDMKEFLDLRTGIKELPSSMEHLLNINSLFLSDCKNLRSLLSSIRRFKSFRRLFLNGCS 60

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L N P+ +  ++ LE L + GTAI+   SSI  +K+L+ LY S C          + +P
Sbjct: 61  SLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKN-------LVTIP 113

Query: 195 FNLLGKSSCPVALMLP----------SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
            + +    C   L+LP          +L G+C+L +LDLS C L E +IP+DI  L+SL 
Sbjct: 114 -DSINDLRCLRRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLC 172

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            L L+ N+ V++P+ I+ L  L  L++  CK LQ +P++  +L  + A+GC+ L  L
Sbjct: 173 TLNLSGNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSSSLPQIDAHGCTKLEML 229



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  MK+  DL    T I E+PSS+E L  +  L L  CKNL SL  +I   K  R L L+
Sbjct: 1   MEDMKEFLDLR---TGIKELPSSMEHLLNINSLFLSDCKNLRSLLSSIRRFKSFRRLFLN 57

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GCS L+ FP+I+  M+ L  L L+GT+I E+PSSI+ L  L++LYL+ CKNLV +P SIN
Sbjct: 58  GCSSLRNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSIN 117

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT--SSIFLMKNLRSLYFS 178
            L+ L+ L L GC  LE  P  L  + +L ELD+S   +   +  + I+ + +L +L  S
Sbjct: 118 DLRCLRRLILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLCTLNLS 177

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
           G +     +         LL  S C +   +P L+   SL ++D   C
Sbjct: 178 GNHMVSIPSGITQLCRLRLLDISHCKMLQEIPELSS--SLPQIDAHGC 223



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 83/153 (54%), Gaps = 1/153 (0%)

Query: 659 DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF 718
           D+ + L   T I+EL  ++E L  +  L L+ CKNL  L  +I   K    L L+G S  
Sbjct: 3   DMKEFLDLRTGIKELPSSMEHLLNINSLFLSDCKNLRSLLSSIRRFKSFRRLFLNGCSSL 62

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           R FPEI      L  + LEGTAI+ LP+SI+ L    +  L +CKNL ++P +IN LR L
Sbjct: 63  RNFPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCL 122

Query: 779 RMMYPSGCSKLKNVTETL-GKVESLEVRLSSWN 810
           R +   GCS L+   + L G    +E+ LS  N
Sbjct: 123 RRLILPGCSNLEKFPKNLEGLCTLVELDLSHCN 155



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 26/155 (16%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I++ +        +GT I+EL  +I+ L  L  L L+ CKNL  +P +I+ L+ L  
Sbjct: 65  FPEIMEGMKYLEVLGLEGTAIKELPSSIQNLKSLQMLYLSNCKNLVTIPDSINDLRCLRR 124

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHL------EG---TAIRGLPASIEL-LSGNILSNL 759
           L L G S   +FP+       L+E+ L      EG   T I GL +   L LSGN     
Sbjct: 125 LILPGCSNLEKFPKNLEGLCTLVELDLSHCNLMEGSIPTDIWGLYSLCTLNLSGN----- 179

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
               ++ S+PS I  L  LR++  S C  L+ + E
Sbjct: 180 ----HMVSIPSGITQLCRLRLLDISHCKMLQEIPE 210


>gi|15238668|ref|NP_197290.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005098|gb|AED92481.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1197

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 191/409 (46%), Gaps = 97/409 (23%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +   ++L +L L+G T++ E+   +E +  L  L L+GC +L SLP     L  L+TL L
Sbjct: 679  LGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLIL 736

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSK K F Q+++  + L  LYLDGT+I E                        LP  I
Sbjct: 737  SGCSKFKTF-QVIS--DKLEALYLDGTAIKE------------------------LPCDI 769

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L+ L  LN+ GC KL+ +PD+LG++++LEEL +SG                     S 
Sbjct: 770  GRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGC--------------------SK 809

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             NE P +  W                           ++++L++    L E AI  D+  
Sbjct: 810  LNEFPET--W--------------------------GNMSRLEI--LLLDETAI-KDMPK 838

Query: 240  LHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            + S++ L LN+N  ++ LP  ++    L+ L L+ CK L  +PQ+PPNLQ++  +GCSSL
Sbjct: 839  ILSVRRLCLNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSL 898

Query: 299  VTLFGAL------KLCRSKYTIINCIDSLKLLRKNGLAISMLRE-YLELQAVSD------ 345
             T+   L      K   S +   NC + L+   K  + +   R+ +L   A+        
Sbjct: 899  KTVAKPLVCSIPMKHVNSSFIFTNC-NELEQAAKEEIVVYAERKCHLLASALKRCDESCV 957

Query: 346  PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
            P       FPG ++P WF +   GS +    P + +N N++ G A+C V
Sbjct: 958  PEILFCTSFPGCEMPSWFSHDAIGSMVEFELPPH-WNHNRLSGIALCVV 1005



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 5/139 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++E+ + +E +  LV L L GC +L+ LP     L  L TL LSG SKF+ F  I+  
Sbjct: 694 TALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLILSGCSKFKTFQVIS-- 749

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            D+L  ++L+GTAI+ LP  I  L   ++ N+K CK LK LP ++  L++L  +  SGCS
Sbjct: 750 -DKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCS 808

Query: 788 KLKNVTETLGKVESLEVRL 806
           KL    ET G +  LE+ L
Sbjct: 809 KLNEFPETWGNMSRLEILL 827



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 12/143 (8%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT I+EL   I  L  LV L + GCK L+RLP ++  LK L  L LSG SK  EFPE  
Sbjct: 758 DGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETW 817

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN----LKSLPSTINGLRSLRMM 781
            +  +L  + L+ TAI+ +P         ILS  + C N    +  LP  +N    L+ +
Sbjct: 818 GNMSRLEILLLDETAIKDMP--------KILSVRRLCLNKNEKISRLPDLLNKFSQLQWL 869

Query: 782 YPSGCSKLKNVTETLGKVESLEV 804
           +   C  L +V +    ++ L V
Sbjct: 870 HLKYCKNLTHVPQLPPNLQYLNV 892


>gi|147851963|emb|CAN81250.1| hypothetical protein VITISV_002336 [Vitis vinifera]
          Length = 482

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 105/173 (60%), Gaps = 24/173 (13%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L +LYL  T+I E+PSSIE LTGL LL LK                         
Sbjct: 258 GNMEHLLELYLASTAIEELPSSIEHLTGLVLLDLKS------------------------ 293

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSKL+ FP+++  ME+L +L+LDGTSI  +PSSI+ L GL LL L  CKNLV LP  +  
Sbjct: 294 CSKLENFPEMMKEMENLKELFLDGTSIEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMCT 353

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           L SL+TL +SGC +L N P  LG ++ L +   +GTAI +P  SI L++NL++
Sbjct: 354 LTSLETLIVSGCSQLNNFPKNLGSLQHLAQPHANGTAITQPPDSIVLLRNLKA 406



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 120/251 (47%), Gaps = 54/251 (21%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           V  SI  L+ L LL LK CK LSS P +I  ++ L  L LSGCS+LKKFP I  +ME L 
Sbjct: 206 VHPSIGKLSKLILLNLKNCKKLSSFP-SIIDMEALEILNLSGCSELKKFPDIQGNMEHLL 264

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           +LYL  T+I E+PSSIE L GL LL                        +L  C KLEN 
Sbjct: 265 ELYLASTAIEELPSSIEHLTGLVLL------------------------DLKSCSKLENF 300

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
           P+ + ++E+L+EL + GT+I    SSI  +K L  L    C               NL+ 
Sbjct: 301 PEMMKEMENLKELFLDGTSIEGLPSSIDRLKGLVLLNLRNCK--------------NLVS 346

Query: 200 KSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
                    LP   G+C+LT L+   +S C       P ++ +L  L + + N       
Sbjct: 347 ---------LPK--GMCTLTSLETLIVSGCS-QLNNFPKNLGSLQHLAQPHANGTAITQP 394

Query: 257 PASISGLLNLE 267
           P SI  L NL+
Sbjct: 395 PDSIVLLRNLK 405



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 71/102 (69%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M++L +L+LDGTSI  +PSSI+ L GL LL L+ CKNL SLP  + +L  L TL +S
Sbjct: 304 MKEMENLKELFLDGTSIEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMCTLTSLETLIVS 363

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           GCS+L  FP+ + S++ L++ + +GT+I + P SI LL  L+
Sbjct: 364 GCSQLNNFPKNLGSLQHLAQPHANGTAITQPPDSIVLLRNLK 405



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 16/166 (9%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL---------LFGLVQLTLNGCKNLER 696
           NC +L      FP I+ +  +  +I  LS   EL         +  L++L L     +E 
Sbjct: 223 NCKKL----SSFPSIIDM--EALEILNLSGCSELKKFPDIQGNMEHLLELYL-ASTAIEE 275

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           LP +I  L  L  L+L   SK   FPE+    + L E+ L+GT+I GLP+SI+ L G +L
Sbjct: 276 LPSSIEHLTGLVLLDLKSCSKLENFPEMMKEMENLKELFLDGTSIEGLPSSIDRLKGLVL 335

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            NL++CKNL SLP  +  L SL  +  SGCS+L N  + LG ++ L
Sbjct: 336 LNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNFPKNLGSLQHL 381



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 124/297 (41%), Gaps = 73/297 (24%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LY  G  +  +PSS       +L+ L  C  +L  L  +   L+ L T+ LS C +
Sbjct: 141 ELRYLYWQGYPLESLPSS---FYAEDLVELDMCYSSLKQLWESDMLLEKLNTIRLSCCQR 197

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L + P I                   V  SI  L  L LL L  CK L   PS I+ +++
Sbjct: 198 LIEIPDI------------------SVHPSIGKLSKLILLNLKNCKKLSSFPSIID-MEA 238

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L+ LNLSGC +L+  PD  G +E L EL ++ TAI    SSI                  
Sbjct: 239 LEILNLSGCSELKKFPDIQGNMEHLLELYLASTAIEELPSSI------------------ 280

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                                      LTG   L  LDL  C   E   P  +  + +LK
Sbjct: 281 -------------------------EHLTG---LVLLDLKSCSKLEN-FPEMMKEMENLK 311

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSL 298
           EL+L+  +   LP+SI  L  L  L L +CK L SLP+      +L+ +  +GCS L
Sbjct: 312 ELFLDGTSIEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQL 368



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 24/149 (16%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L  CK L   P  I  ++ L  LNLSG S+ ++FP+I  + + LLE++L  TAI 
Sbjct: 216 LILLNLKNCKKLSSFPSIID-MEALEILNLSGCSELKKFPDIQGNMEHLLELYLASTAIE 274

Query: 743 GLPASIELLSGNILSNLKDCKNLKS-----------------------LPSTINGLRSLR 779
            LP+SIE L+G +L +LK C  L++                       LPS+I+ L+ L 
Sbjct: 275 ELPSSIEHLTGLVLLDLKSCSKLENFPEMMKEMENLKELFLDGTSIEGLPSSIDRLKGLV 334

Query: 780 MMYPSGCSKLKNVTETLGKVESLEVRLSS 808
           ++    C  L ++ + +  + SLE  + S
Sbjct: 335 LLNLRNCKNLVSLPKGMCTLTSLETLIVS 363



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 21/174 (12%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           +CS+L    E   E  ++ ++  DGT I  L  +I+ L GLV L L  CKNL  LP+ + 
Sbjct: 293 SCSKLENFPEMMKEMENLKELFLDGTSIEGLPSSIDRLKGLVLLNLRNCKNLVSLPKGMC 352

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD- 761
            L  L TL +SG S+   FP+   S   L + H  GTAI   P SI LL  N+ + ++  
Sbjct: 353 TLTSLETLIVSGCSQLNNFPKNLGSLQHLAQPHANGTAITQPPDSIVLLR-NLKAKIEGE 411

Query: 762 ---------CKNLKSLPSTIN-------GLRSLRMMYPSGCSKLKNVTETLGKV 799
                        K L  TI+         R  +++  + C+K++ V + L +V
Sbjct: 412 FGAYEESELWSTSKPLAKTISSKMEENRAFRKAKIIKFARCAKIRKVCQNLARV 465


>gi|255555349|ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223542092|gb|EEF43636.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 187/399 (46%), Gaps = 72/399 (18%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ EV SSI+ L  LE L +  C NL  LP  I S + L+  +++ C ++K+ PQ   ++
Sbjct: 679  SLEEVHSSIQYLNKLEFLDIGECYNLRRLPGRIDS-EVLKVFKVNDCPRIKRCPQFQGNL 737

Query: 76   EDLSKLYLDGTSIAEVP---SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
            E+L    LD T+I +V    SSI +   L  L +  C  L  LPSS   LKSL++L+L  
Sbjct: 738  EELE---LDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFYKLKSLESLDLDN 794

Query: 133  CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
              +LE+ P+ L  + +LE                  ++N R L                 
Sbjct: 795  WSELESFPEILEPMINLE---------------FITLRNCRRLK---------------R 824

Query: 193  LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-N 251
            LP                S+  + SL  LD+    + E  IPS I++L  L  L LN   
Sbjct: 825  LP---------------NSICNLKSLAYLDVEGAAIKE--IPSSIEHLILLTTLKLNDCK 867

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL-KLCRS 310
            +  +LP SI  L  L+ LEL  CK L+SLP+ P +L  + A  C SL T+  +  K C  
Sbjct: 868  DLESLPCSIHKLPQLQTLELYSCKSLRSLPEFPLSLLRLLAMNCESLETISISFNKHCNL 927

Query: 311  KY-TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH-KLSIVFPGSQIPKWFMYQNE 368
            +  T  NC      LR +  A+  +       A +   H    +++PGS+IP+WF +Q+ 
Sbjct: 928  RILTFANC------LRLDPKALGTV-------ARAASSHTDFFLLYPGSEIPRWFSHQSM 974

Query: 369  GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
            GSS+T+  P  L    K + F +   F++P   +G Y F
Sbjct: 975  GSSVTLQFPVNLKQF-KAIAFCVVFKFKIPPKKSGDYYF 1012



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 103/202 (50%), Gaps = 29/202 (14%)

Query: 6   DLSDLYLDGTSITEVP---SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +L +L LD T+IT+V    SSI + + L  L +  C  LSSLP +   LK L +L+L   
Sbjct: 736 NLEELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFYKLKSLESLDLDNW 795

Query: 63  SKLKKFPQIVASMEDL----------------------SKLYLD--GTSIAEVPSSIELL 98
           S+L+ FP+I+  M +L                      S  YLD  G +I E+PSSIE L
Sbjct: 796 SELESFPEILEPMINLEFITLRNCRRLKRLPNSICNLKSLAYLDVEGAAIKEIPSSIEHL 855

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L  L LN+CK+L  LP SI+ L  L+TL L  C  L ++P+    +  L  L ++  +
Sbjct: 856 ILLTTLKLNDCKDLESLPCSIHKLPQLQTLELYSCKSLRSLPEF--PLSLLRLLAMNCES 913

Query: 159 IRRPTSSIFLMKNLRSLYFSGC 180
           +   + S     NLR L F+ C
Sbjct: 914 LETISISFNKHCNLRILTFANC 935



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 28/146 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K L+ L ++G +I E+PSSIE L  L  L L  CK+L SLP +I  L  L+TLEL 
Sbjct: 829 ICNLKSLAYLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKLPQLQTLELY 888

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C  L+  P+   S+                         L LL +N C++L  +  S N
Sbjct: 889 SCKSLRSLPEFPLSL-------------------------LRLLAMN-CESLETISISFN 922

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKV 146
              +L+ L  + C +L+  P  LG V
Sbjct: 923 KHCNLRILTFANCLRLD--PKALGTV 946



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 35/199 (17%)

Query: 620 VDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL 679
           +DS  +  +K      ++R  PQ  GN   L  +     D+   +S          +I +
Sbjct: 711 IDSEVLKVFKVNDCPRIKR-CPQFQGNLEELELDCTAITDVATTIS----------SILI 759

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS------------- 726
              LVQL +  C  L  LP +   LK L +L+L   S+   FPEI               
Sbjct: 760 SSTLVQLAVYNCGKLSSLPSSFYKLKSLESLDLDNWSELESFPEILEPMINLEFITLRNC 819

Query: 727 -----------SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
                      +   L  + +EG AI+ +P+SIE L       L DCK+L+SLP +I+ L
Sbjct: 820 RRLKRLPNSICNLKSLAYLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKL 879

Query: 776 RSLRMMYPSGCSKLKNVTE 794
             L+ +    C  L+++ E
Sbjct: 880 PQLQTLELYSCKSLRSLPE 898



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 38/73 (52%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +G  I+E+  +IE L  L  L LN CK+LE LP +I  L  L TL L      R  PE  
Sbjct: 841 EGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKLPQLQTLELYSCKSLRSLPEFP 900

Query: 726 SSRDQLLEIHLEG 738
            S  +LL ++ E 
Sbjct: 901 LSLLRLLAMNCES 913



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 7/137 (5%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           + E+  +I+ L  L  L +  C NL RLP  I + + L    ++   + +  P+   +  
Sbjct: 680 LEEVHSSIQYLNKLEFLDIGECYNLRRLPGRIDS-EVLKVFKVNDCPRIKRCPQFQGN-- 736

Query: 730 QLLEIHLEGTAIRGLPASIE--LLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            L E+ L+ TAI  +  +I   L+S  ++   + +C  L SLPS+   L+SL  +     
Sbjct: 737 -LEELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLPSSFYKLKSLESLDLDNW 795

Query: 787 SKLKNVTETLGKVESLE 803
           S+L++  E L  + +LE
Sbjct: 796 SELESFPEILEPMINLE 812


>gi|147774849|emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 188/436 (43%), Gaps = 97/436 (22%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL------------------- 41
            +  ++ L +L  + +++ E+P S   LT LE L+L  C+++                   
Sbjct: 855  IGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVXNLKLLTEFLMN 914

Query: 42   ----SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                + LP +I SL  L+ L +  C  L K P  +  +  +  L LDGTSI ++P  I  
Sbjct: 915  GSPVNELPASIGSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQLDGTSIMDLPDQIGG 974

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTL-----------------------NLSGCC 134
            L  L  L +  CK L  LP +I  + SL TL                       NL+ C 
Sbjct: 975  LKTLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCK 1034

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            +L  +P ++G ++SL  L +  TA+R+   S  ++ +L  L  +    P      HL LP
Sbjct: 1035 RLRRLPGSIGXLKSLHHLXMEETAVRQLPESFGMLTSLMRLLMA--KRP------HLELP 1086

Query: 195  FNL-------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
              L       LG       ++LP S + +  L +LD     +    IP D D L SL+ L
Sbjct: 1087 QALGPTETKVLGAEENSELIVLPTSFSNLSLLYELDARAWKIS-GKIPDDFDKLSSLEIL 1145

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL----- 301
             L RNNF +LP+S+ GL  L +L L  C+ L++LP +P +L  V A  C +L  +     
Sbjct: 1146 NLGRNNFSSLPSSLRGLSILRKLLLPHCEELKALPPLPSSLMEVNAANCYALEVISDLSN 1205

Query: 302  ---FGALKLCRSKYTI----INCIDSLKLLRKNG-------LAISMLREYLELQAVSDPG 347
                  L L   K  +    + C+ SLK    +G       +A+  LR            
Sbjct: 1206 LESLQELNLTNCKKLVDIPGVECLKSLKGFFMSGCSSCSSTVALKNLR------------ 1253

Query: 348  HKLSIVFPGSQIPKWF 363
               ++  PGS IP WF
Sbjct: 1254 ---TLSIPGSNIPDWF 1266



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 30/269 (11%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + ++  SI  +  L  L L  CKNL   P  +S LK L TL LSGCSKLK+ P+ ++ M+
Sbjct: 753 LVKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLXTLILSGCSKLKELPENISYMK 812

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L +L LDGT I ++P S+  L  LE L LN C++L +LP+ I  L+SL+ L+ +    L
Sbjct: 813 SLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSA-L 871

Query: 137 ENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSG--CNEPPASASWHLHL 193
           E +PD+ G + +LE L +    +I     S+  +K L     +G   NE PA        
Sbjct: 872 EEIPDSFGSLTNLERLSLMRCQSIYAIPDSVXNLKLLTEFLMNGSPVNELPA-------- 923

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                            S+  + +L  L +  C    + +P+ I+ L S+  L L+  + 
Sbjct: 924 -----------------SIGSLSNLKDLSVGXCRF-LSKLPASIEGLASMVXLQLDGTSI 965

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQ 282
           + LP  I GL  L  LE+  CKRL+SLP+
Sbjct: 966 MDLPDQIGGLKTLRRLEMRFCKRLESLPE 994



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           +  L+ L L+ CKNL   P  +S LK L TL LSG SK +E PE  S    L E+ L+GT
Sbjct: 763 IISLLHLDLSECKNLVEFPSDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGT 822

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            I  LP S+  L+     +L +C++LK LP+ I  L SLR +  +  S L+ + ++ G +
Sbjct: 823 VIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFND-SALEEIPDSFGSL 881

Query: 800 ESLEVRLS 807
            +LE RLS
Sbjct: 882 TNLE-RLS 888



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 654  ADEFPDIVQVLSDGTDIR--------ELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
             +E P  +  LS+  D+         +L  +IE L  +V L L+G   ++ LP  I  LK
Sbjct: 918  VNELPASIGSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQLDGTSIMD-LPDQIGGLK 976

Query: 706  YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             L  L +    +    PE   S   L  + +    +  LP SI  L   I+ NL  CK L
Sbjct: 977  TLRRLEMRFCKRLESLPEAIGSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRL 1036

Query: 766  KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSA 825
            + LP +I  L+SL  +     + ++ + E+ G + SL +RL    RP ++     + Q+ 
Sbjct: 1037 RRLPGSIGXLKSLHHLXMEETA-VRQLPESFGMLTSL-MRLLMAKRPHLE-----LPQAL 1089

Query: 826  VETVTKLAKAE 836
              T TK+  AE
Sbjct: 1090 GPTETKVLGAE 1100



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 34/197 (17%)

Query: 123 KSLKTLNLSGCCKLENVPD-----------------------TLGKVESLEELDVS--GT 157
           ++L  +N  GCC L  +PD                       ++G + SL  LD+S    
Sbjct: 717 ENLMVMNXHGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKN 776

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLP-SLT 213
            +  P S +  +KNL +L  SGC+   E P + S+   L   LL  +   V   LP S+ 
Sbjct: 777 LVEFP-SDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGT---VIEKLPESVL 832

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +L L++C      +P+ I  L SL+EL  N +    +P S   L NLE L L  
Sbjct: 833 RLTRLERLSLNNCQ-SLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMR 891

Query: 274 CKRLQSLPQIPPNLQFV 290
           C+ + ++P    NL+ +
Sbjct: 892 CQSIYAIPDSVXNLKLL 908



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 37/187 (19%)

Query: 647 CSRLWEEADEF---PDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L E  +       + ++L DGT I +L  ++  L  L +L+LN C++L++LP  I  
Sbjct: 798 CSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIGK 857

Query: 704 LKYLSTL------------------NLSGLSKFR-----EFPEITSSRDQLLEIHLEGTA 740
           L+ L  L                  NL  LS  R       P+   +   L E  + G+ 
Sbjct: 858 LESLRELSFNDSALEEIPDSFGSLTNLERLSLMRCQSIYAIPDSVXNLKLLTEFLMNGSP 917

Query: 741 IRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           +  LPASI       LSNLKD     C+ L  LP++I GL S+  +   G S + ++ + 
Sbjct: 918 VNELPASI-----GSLSNLKDLSVGXCRFLSKLPASIEGLASMVXLQLDGTS-IMDLPDQ 971

Query: 796 LGKVESL 802
           +G +++L
Sbjct: 972 IGGLKTL 978


>gi|10177889|dbj|BAB11221.1| disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 191/409 (46%), Gaps = 97/409 (23%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +   ++L +L L+G T++ E+   +E +  L  L L+GC +L SLP     L  L+TL L
Sbjct: 682  LGKAQNLQELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLIL 739

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSK K F Q+++  + L  LYLDGT+I E                        LP  I
Sbjct: 740  SGCSKFKTF-QVIS--DKLEALYLDGTAIKE------------------------LPCDI 772

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L+ L  LN+ GC KL+ +PD+LG++++LEEL +SG                     S 
Sbjct: 773  GRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGC--------------------SK 812

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             NE P +  W                           ++++L++    L E AI  D+  
Sbjct: 813  LNEFPET--W--------------------------GNMSRLEI--LLLDETAI-KDMPK 841

Query: 240  LHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            + S++ L LN+N  ++ LP  ++    L+ L L+ CK L  +PQ+PPNLQ++  +GCSSL
Sbjct: 842  ILSVRRLCLNKNEKISRLPDLLNKFSQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSL 901

Query: 299  VTLFGAL------KLCRSKYTIINCIDSLKLLRKNGLAISMLRE-YLELQAVSD------ 345
             T+   L      K   S +   NC + L+   K  + +   R+ +L   A+        
Sbjct: 902  KTVAKPLVCSIPMKHVNSSFIFTNC-NELEQAAKEEIVVYAERKCHLLASALKRCDESCV 960

Query: 346  PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
            P       FPG ++P WF +   GS +    P + +N N++ G A+C V
Sbjct: 961  PEILFCTSFPGCEMPSWFSHDAIGSMVEFELPPH-WNHNRLSGIALCVV 1008



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 5/139 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++E+ + +E +  LV L L GC +L+ LP     L  L TL LSG SKF+ F  I+  
Sbjct: 697 TALKEMHVDMENMKFLVFLNLRGCTSLKSLPEI--QLISLKTLILSGCSKFKTFQVIS-- 752

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            D+L  ++L+GTAI+ LP  I  L   ++ N+K CK LK LP ++  L++L  +  SGCS
Sbjct: 753 -DKLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCS 811

Query: 788 KLKNVTETLGKVESLEVRL 806
           KL    ET G +  LE+ L
Sbjct: 812 KLNEFPETWGNMSRLEILL 830



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 12/143 (8%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT I+EL   I  L  LV L + GCK L+RLP ++  LK L  L LSG SK  EFPE  
Sbjct: 761 DGTAIKELPCDIGRLQRLVMLNMKGCKKLKRLPDSLGQLKALEELILSGCSKLNEFPETW 820

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN----LKSLPSTINGLRSLRMM 781
            +  +L  + L+ TAI+ +P         ILS  + C N    +  LP  +N    L+ +
Sbjct: 821 GNMSRLEILLLDETAIKDMP--------KILSVRRLCLNKNEKISRLPDLLNKFSQLQWL 872

Query: 782 YPSGCSKLKNVTETLGKVESLEV 804
           +   C  L +V +    ++ L V
Sbjct: 873 HLKYCKNLTHVPQLPPNLQYLNV 895


>gi|297811953|ref|XP_002873860.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319697|gb|EFH50119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 191/426 (44%), Gaps = 99/426 (23%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +A  ++L +L L+G  ++  +P  +E +  L  L L+GC +L  LP    +L  L TL L
Sbjct: 678  LAEARNLQELNLEGCIALATLPQDMENMKCLVFLNLRGCTSLKYLPEI--NLISLETLIL 735

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CSK K F  I    E L  +YLDGT+I E                        LPS I
Sbjct: 736  SDCSKFKVFKVI---SEKLEAIYLDGTAIKE------------------------LPSDI 768

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L+ L  LN+ GC KL+ +PD+LG++++L+EL                         SG
Sbjct: 769  RNLQRLVLLNMKGCKKLKTLPDSLGELKALQEL-----------------------ILSG 805

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C++  +         F  + K+   + ++L                  L E AI  ++ N
Sbjct: 806  CSKLQS---------FPEVAKNMNRLEILL------------------LDETAI-KEMPN 837

Query: 240  LHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            + SL+ L L+RN  +  LP +IS    L+ L+++ CK L  LP++PPNLQ + A+GCSSL
Sbjct: 838  IFSLRYLCLSRNEKICRLPENISQFSRLKWLDMKYCKSLTYLPKLPPNLQCLDAHGCSSL 897

Query: 299  VTLFG------ALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD------- 345
             ++        A +   S +    C D L+   K  ++    R+   L +          
Sbjct: 898  KSIVQPLAHVMATEHIHSTFIFTKC-DKLEQAAKEEISSYSQRKCQILPSALKLCNKDLV 956

Query: 346  PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV--FQVPKHSTG 403
            P    S  FPG +IP WF +Q  GS +    P + +  NK+ G A C V  FQ  +  T 
Sbjct: 957  PEILFSTCFPGGEIPPWFYHQAIGSKVKFESPQH-WKYNKLSGIAFCAVVSFQNCQDQTR 1015

Query: 404  TYLFHS 409
            T   H+
Sbjct: 1016 TEREHT 1021



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 5/124 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L L GC +L+ LP     L  L TL LS  SKF+ F  I+   ++L  I+L+GTAI+
Sbjct: 708 LVFLNLRGCTSLKYLPEI--NLISLETLILSDCSKFKVFKVIS---EKLEAIYLDGTAIK 762

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+ I  L   +L N+K CK LK+LP ++  L++L+ +  SGCSKL++  E    +  L
Sbjct: 763 ELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELKALQELILSGCSKLQSFPEVAKNMNRL 822

Query: 803 EVRL 806
           E+ L
Sbjct: 823 EILL 826



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 27/189 (14%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT I+EL   I  L  LV L + GCK L+ LP ++  LK L  L LSG SK + FPE+ 
Sbjct: 757 DGTAIKELPSDIRNLQRLVLLNMKGCKKLKTLPDSLGELKALQELILSGCSKLQSFPEVA 816

Query: 726 SSRDQLLEIHLEGTAIRGLPASIEL-------------LSGNILS-------NLKDCKNL 765
            + ++L  + L+ TAI+ +P    L             L  NI         ++K CK+L
Sbjct: 817 KNMNRLEILLLDETAIKEMPNIFSLRYLCLSRNEKICRLPENISQFSRLKWLDMKYCKSL 876

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSA 825
             LP     L+ L      GCS LK++ + L  V + E   S++   K     D +EQ+A
Sbjct: 877 TYLPKLPPNLQCLD---AHGCSSLKSIVQPLAHVMATEHIHSTFIFTKC----DKLEQAA 929

Query: 826 VETVTKLAK 834
            E ++  ++
Sbjct: 930 KEEISSYSQ 938


>gi|356515118|ref|XP_003526248.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1010

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 180/362 (49%), Gaps = 34/362 (9%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           N+  L   I  L  LR L+LS    L + P     + +L  + L+G T++A +  S+ LL
Sbjct: 617 NIKQLWKGIKHLPNLRALDLSYSKNLIEAPDF-GGVLNLEWIILEGCTNLARIHPSVGLL 675

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL--ENVPDTLGKVESLEELDVSG 156
             L  L L  C +LV LPS+I  L SL  LN+SGC K+    + +     E  +  D+  
Sbjct: 676 RKLAFLNLKNCISLVSLPSNILSLSSLGYLNISGCPKVFSNQLLEKPIHEEHSKMPDIRQ 735

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
           TA++  ++S  + K L +L F         +S++     N  G        +LPSL    
Sbjct: 736 TAMQFQSTSSSIFKRLINLTFR--------SSYYSRGYRNSAG-------CLLPSLPTFF 780

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            +  LDLS C L +  IP  I ++HSL+ L L  NNFV+LP SI+ L  L  L LE CK+
Sbjct: 781 CMRDLDLSFCNLSQ--IPDAIGSMHSLETLNLGGNNFVSLPYSINQLSKLVHLNLEHCKQ 838

Query: 277 LQSLPQI--PPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISML 334
           L+  P++  P +L  +R          +      R  + I NC   + + R  G+  + +
Sbjct: 839 LRYFPEMPSPTSLPVIRET--------YNFAHYPRGLF-IFNCPKIVDIARCWGMTFAWM 889

Query: 335 REYLELQAVSDPGHK-LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICC 393
            + L++   SD     + IV PG+QIPKWF  Q+ G+SI++  PS + + N  +G A C 
Sbjct: 890 IQILQVSQESDTRIGWIDIVVPGNQIPKWFNNQSVGTSISLD-PSPIMHGNHWIGIACCV 948

Query: 394 VF 395
           VF
Sbjct: 949 VF 950



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 15/189 (7%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  + L+G T++  +  S+ LL  L  L LK C +L SLP  I SL  L  L +SGC K
Sbjct: 653 NLEWIILEGCTNLARIHPSVGLLRKLAFLNLKNCISLVSLPSNILSLSSLGYLNISGCPK 712

Query: 65  L-------KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL---LYLNECKNLVR 114
           +       K   +  + M D+ +  +   S +   S  + L  L      Y    +N   
Sbjct: 713 VFSNQLLEKPIHEEHSKMPDIRQTAMQFQSTSS--SIFKRLINLTFRSSYYSRGYRNSAG 770

Query: 115 -LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            L  S+     ++ L+LS  C L  +PD +G + SLE L++ G        SI  +  L 
Sbjct: 771 CLLPSLPTFFCMRDLDLS-FCNLSQIPDAIGSMHSLETLNLGGNNFVSLPYSINQLSKLV 829

Query: 174 SLYFSGCNE 182
            L    C +
Sbjct: 830 HLNLEHCKQ 838



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L    N+++L + I  L  L  L+LS      E P+     + L  I LEG T +
Sbjct: 608 LVELILQH-SNIKQLWKGIKHLPNLRALDLSYSKNLIEAPDFGGVLN-LEWIILEGCTNL 665

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             +  S+ LL      NLK+C +L SLPS I  L SL  +  SGC K+
Sbjct: 666 ARIHPSVGLLRKLAFLNLKNCISLVSLPSNILSLSSLGYLNISGCPKV 713



 Score = 39.3 bits (90), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 11/183 (6%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           K  GR  V+  +P+EPG  SR+W   D +       +   +   L   +E+L    +  L
Sbjct: 498 KVLGRTIVKGNAPKEPGKWSRVWLHEDFYNMSKATETTNNEAIVLDREMEILMADAE-AL 556

Query: 689 NGCKNLERLP-RTISALKYLSTLN-LSGLSKFRE-----FPEITSSR--DQLLEIHLEGT 739
           +   NL  L  R +  +  L+++N LS   +F E     F  + SS   + L+E+ L+ +
Sbjct: 557 SKMSNLRLLIFRDVKFMGILNSVNCLSNKLQFLEWYNYPFSYLPSSFQPNLLVELILQHS 616

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            I+ L   I+ L      +L   KNL   P    G+ +L  +   GC+ L  +  ++G +
Sbjct: 617 NIKQLWKGIKHLPNLRALDLSYSKNLIEAPD-FGGVLNLEWIILEGCTNLARIHPSVGLL 675

Query: 800 ESL 802
             L
Sbjct: 676 RKL 678


>gi|296086469|emb|CBI32058.3| unnamed protein product [Vitis vinifera]
          Length = 1344

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 172/352 (48%), Gaps = 55/352 (15%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            L ++ L GC NL+++P  +S  + L  L L  C  L K  + +  +  +S L+LD     
Sbjct: 818  LMVMNLHGCCNLTAIP-DLSGNQALEKLILQHCHGLVKIHKSIGDI--ISLLHLD----- 869

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
                            L+ECKNLV  PS ++GLK+L+TL LSGC KL+ +P+ +  ++SL
Sbjct: 870  ----------------LSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSL 913

Query: 150  EELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVA 206
             EL + GT I +   S+  +  L  L  + C   NE PAS          +LG       
Sbjct: 914  RELLLDGTVIEKLPESVLRLTRLERLSLNNCHPVNELPASI---------VLGAEENSEL 964

Query: 207  LMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            ++LP S + +  L +LD     +    IP D D L SL+ L L RNNF +LP+S+ GL  
Sbjct: 965  IVLPTSFSNLSLLYELDARAWKIS-GKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSI 1023

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL--------FGALKLCRSKYTI--- 314
            L +L L  C+ L++LP +P +L  V A  C +L  +           L L   K  +   
Sbjct: 1024 LRKLLLPHCEELKALPPLPSSLMEVNAANCYALEVISDLSNLESLQELNLTNCKKLVDIP 1083

Query: 315  -INCIDSLKLLRKNGLA--ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWF 363
             + C+ SLK    +G +   S ++  L   A+ +    LSI  PGS IP WF
Sbjct: 1084 GVECLKSLKGFFMSGCSSCSSTVKRRLSKVALKNL-RTLSI--PGSNIPDWF 1132



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 33/256 (12%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + ++  SI  +  L  L L  CKNL   P  +S LK L+TL LSGCSKLK+ P+ ++ M+
Sbjct: 852  LVKIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMK 911

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-----------------NLVRLPSSI 119
             L +L LDGT I ++P S+  L  LE L LN C                   L+ LP+S 
Sbjct: 912  SLRELLLDGTVIEKLPESVLRLTRLERLSLNNCHPVNELPASIVLGAEENSELIVLPTSF 971

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            + L  L  L+         +PD   K+ SLE L++         SS+  +  LR L    
Sbjct: 972  SNLSLLYELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLLPH 1031

Query: 180  CNE----PPASASWHLHLPFNLL--GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
            C E    PP        LP +L+    ++C    ++  L+ + SL +L+L++C      I
Sbjct: 1032 CEELKALPP--------LPSSLMEVNAANCYALEVISDLSNLESLQELNLTNCK-KLVDI 1082

Query: 234  PSDIDNLHSLKELYLN 249
            P  ++ L SLK  +++
Sbjct: 1083 PG-VECLKSLKGFFMS 1097



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 21/198 (10%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTI------------ 48
            ++ MK L +L LDGT I ++P S+  LT LE L+L  C  ++ LP +I            
Sbjct: 907  ISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCHPVNELPASIVLGAEENSELIV 966

Query: 49   -----SSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
                 S+L  L  L+        K P     +  L  L L   + + +PSS+  L  L  
Sbjct: 967  LPTSFSNLSLLYELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSILRK 1026

Query: 104  LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
            L L  C+ L  LP   +   SL  +N + C  LE + D L  +ESL+EL+++        
Sbjct: 1027 LLLPHCEELKALPPLPS---SLMEVNAANCYALEVISD-LSNLESLQELNLTNCKKLVDI 1082

Query: 164  SSIFLMKNLRSLYFSGCN 181
              +  +K+L+  + SGC+
Sbjct: 1083 PGVECLKSLKGFFMSGCS 1100



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 20/197 (10%)

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
           P +   H  L   +L ++  PV L++ S + +  L +LD     +  +   SD + L SL
Sbjct: 7   PEATGEHTELTNLILQENPKPVVLLM-SFSNLFMLKELDARAWKISGSI--SDFEKLSSL 63

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
           ++L L  NNF +LP+S+ GL  L+ L L  CK + SLP +P +L  +  + C +L ++  
Sbjct: 64  EDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSNCCALQSVSD 123

Query: 304 ALKL----------CRSKYTI--INCIDSLKLLRKNG--LAISMLREYLELQAVSDPGHK 349
              L          C+    I  + C+ SLK    +G    +  L+  +   A+    H 
Sbjct: 124 LSNLKSLEDLNLTNCKKIMDIPGLQCLKSLKRFYASGCNACLPALKSRITKVALK---HL 180

Query: 350 LSIVFPGSQIPKWFMYQ 366
            ++  PGS+IP WF+ +
Sbjct: 181 YNLSVPGSEIPNWFVQE 197



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 52/93 (55%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           +  L+ L L+ CKNL   P  +S LK L TL LSG SK +E PE  S    L E+ L+GT
Sbjct: 862 IISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGT 921

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            I  LP S+  L+     +L +C  +  LP++I
Sbjct: 922 VIEKLPESVLRLTRLERLSLNNCHPVNELPASI 954



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 7/110 (6%)

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           ++S+EDL+   L   +   +PSS++ L  L+ L+L  CK +  LP   +   SL  LN+S
Sbjct: 60  LSSLEDLN---LGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPS---SLIKLNVS 113

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            CC L++V D L  ++SLE+L+++          +  +K+L+  Y SGCN
Sbjct: 114 NCCALQSVSD-LSNLKSLEDLNLTNCKKIMDIPGLQCLKSLKRFYASGCN 162



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 19/134 (14%)

Query: 682 GLVQLTLNGCKNLERLP-------RTISALKYLSTLNLSGLSKFREFPEITSSR--DQLL 732
           GL  L L+  KN+ERL              + L  +NL G       P+++ ++  ++L+
Sbjct: 786 GLRVLDLSESKNIERLWGGRWWSWHNNKVGENLMVMNLHGCCNLTAIPDLSGNQALEKLI 845

Query: 733 EIHLEGTAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
             H  G         I    G+I+S    +L +CKNL   PS ++GL++L+ +  SGCSK
Sbjct: 846 LQHCHGLV------KIHKSIGDIISLLHLDLSECKNLVEFPSDVSGLKNLQTLILSGCSK 899

Query: 789 LKNVTETLGKVESL 802
           LK + E +  ++SL
Sbjct: 900 LKELPENISYMKSL 913



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 28/130 (21%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +  L DL L   +   +PSS++ L+ L+ L L  CK ++SLP   SSL     L +S C 
Sbjct: 60  LSSLEDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLI---KLNVSNCC 116

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L+       S+ DLS                  L  LE L L  CK ++ +P  +  LK
Sbjct: 117 ALQ-------SVSDLSN-----------------LKSLEDLNLTNCKKIMDIP-GLQCLK 151

Query: 124 SLKTLNLSGC 133
           SLK    SGC
Sbjct: 152 SLKRFYASGC 161



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 12/148 (8%)

Query: 647  CSRLWEEADEF---PDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
            CS+L E  +       + ++L DGT I +L  ++  L  L +L+LN C  +  LP +I  
Sbjct: 897  CSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCHPVNELPASI-- 954

Query: 704  LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG-LPASIELLSGNILSNLKDC 762
                  L     S+    P   S+   L E+      I G +P   + LS   + NL   
Sbjct: 955  -----VLGAEENSELIVLPTSFSNLSLLYELDARAWKISGKIPDDFDKLSSLEILNLGR- 1008

Query: 763  KNLKSLPSTINGLRSLRMMYPSGCSKLK 790
             N  SLPS++ GL  LR +    C +LK
Sbjct: 1009 NNFSSLPSSLRGLSILRKLLLPHCEELK 1036


>gi|104646943|gb|ABF74095.1| disease resistance protein [Arabidopsis thaliana]
          Length = 588

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 199/454 (43%), Gaps = 87/454 (19%)

Query: 10  LYLDGTSITEVPSSIELLT------------------------GLELLTLKGCKNLSSLP 45
           LYL  T I E+PSSI  L+                         L+ L L GC+ L +LP
Sbjct: 143 LYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLP 202

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
            T+ +L  L TLE+SGC  + +FP +  S+E    L +  TSI E+P+ I  L  L  L 
Sbjct: 203 DTLQNLTSLETLEVSGCLNVNEFPPVSTSIE---VLRISETSIEEIPARICNLSQLRSLD 259

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN------------------------VPD 141
           ++E K L  LP SI+ L+SL+ L LSGC  LE+                        +P+
Sbjct: 260 ISENKRLASLPVSISELRSLEKLKLSGCSVLESFPLEXXXTMXXLRWFDLDRTSIKELPE 319

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +G + +LE L  S T IR    SI  +  L+ L                  P  LL   
Sbjct: 320 NIGNLVALEVLQASRTVIRXXPWSIARLTRLQVLXIGN----------SFFTPEGLLHS- 368

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
                 + P L+    L  L LS+  + E  IP+ I NL  L  L L+      +PASI 
Sbjct: 369 ------LCPPLSRFDDLRALSLSNMNMTE--IPNSIGNLWXLLXLDLSGXXXXXIPASIK 420

Query: 262 GLLNLEELELEDCKRLQSLP-QIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCID 319
            L  L  L L +C+RLQ+LP   P  L  +  + C+SLV++ G   + C  K    NC  
Sbjct: 421 RLTRLNRLNLNNCQRLQALPXXXPXGLLXIXIHSCTSLVSISGCFNQYCLRKLVASNCY- 479

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
                + +  A  ++   L+L++ + P H     FPGS IP  F     G S+ +  P  
Sbjct: 480 -----KLDQAAQILIHRNLKLES-AKPEHS---YFPGSDIPTXFNXXVMGPSLNIQLPQS 530

Query: 380 LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH 413
             + + ++GF+ C +  V     G Y  ++   H
Sbjct: 531 -ESSSDILGFSACIMIGV----DGQYPMNNLKIH 559



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/268 (36%), Positives = 132/268 (49%), Gaps = 57/268 (21%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ EV  SI+ L GL    L  C  L  +P+ I+ LK L T+ +SGCS LK FP+I  + 
Sbjct: 82  SLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNT 140

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
               +LYL  T I E+PSSI  L  L  L +++C+ L  LPS +  L SLK+LNL GC +
Sbjct: 141 R---RLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRR 197

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE-PPASASWHLHLP 194
           LEN+PDTL  + SLE L+VSG                        NE PP S S  +   
Sbjct: 198 LENLPDTLQNLTSLETLEVSGCL--------------------NVNEFPPVSTSIEV--- 234

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-F 253
                                     L +S+  + E  IP+ I NL  L+ L ++ N   
Sbjct: 235 --------------------------LRISETSIEE--IPARICNLSQLRSLDISENKRL 266

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLP 281
            +LP SIS L +LE+L+L  C  L+S P
Sbjct: 267 ASLPVSISELRSLEKLKLSGCSVLESFP 294



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 24/187 (12%)

Query: 629 KKW-GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLA----------- 676
           K W G Q +R     +   C  L E  D        LS  T++ EL+L+           
Sbjct: 38  KLWDGIQPLRNLKKMDLSRCKYLVEVPD--------LSKATNLEELNLSYCQSLVEVTPS 89

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L GL    L  C  L+ +P  I+ LK L T+ +SG S  + FPEI+ +  +L   +L
Sbjct: 90  IKNLKGLSCFYLTNCIQLKDIPIGIT-LKSLETVGMSGCSSLKHFPEISWNTRRL---YL 145

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I  LP+SI  LS  +  ++ DC+ L++LPS +  L SL+ +   GC +L+N+ +TL
Sbjct: 146 SSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTL 205

Query: 797 GKVESLE 803
             + SLE
Sbjct: 206 QNLTSLE 212



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +SD   +R L   +  L  L  L L+GC+ LE LP T+  L  L TL +SG     EFP 
Sbjct: 168 MSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPP 227

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +++S + L    +  T+I  +PA I  LS     ++ + K L SLP +I+ LRSL  +  
Sbjct: 228 VSTSIEVL---RISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEKLKL 284

Query: 784 SGCSKLKN 791
           SGCS L++
Sbjct: 285 SGCSVLES 292



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 124/290 (42%), Gaps = 58/290 (20%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           + L  L  DG  +  +PS       +EL T     NL  L   I  L+ L+ ++LS C  
Sbjct: 2   RKLRYLRWDGYPLKTMPSRFCPEFLVELCTSNS--NLEKLWDGIQPLRNLKKMDLSRCKY 59

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L + P       DLSK                    LE L L+ C++LV +  SI  LK 
Sbjct: 60  LVEVP-------DLSKAT-----------------NLEELNLSYCQSLVEVTPSIKNLKG 95

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--E 182
           L    L+ C +L+++P  +  ++SLE + +SG +  +    I    N R LY S     E
Sbjct: 96  LSCFYLTNCIQLKDIPIGI-TLKSLETVGMSGCSSLKHFPEISW--NTRRLYLSSTKIEE 152

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            P+S S           + SC              L KLD+SDC      +PS + +L S
Sbjct: 153 LPSSIS-----------RLSC--------------LVKLDMSDCQ-RLRTLPSYLGHLVS 186

Query: 243 LKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           LK L L+       LP ++  L +LE LE+  C  +   P +  +++ +R
Sbjct: 187 LKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPPVSTSIEVLR 236



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 654 ADEFPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            +EFP +   ++VL    T I E+   I  L  L  L ++  K L  LP +IS L+ L  
Sbjct: 222 VNEFPPVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLPVSISELRSLEK 281

Query: 710 LNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           L LSG S    FP E   +   L    L+ T+I+ LP +I    GN+++
Sbjct: 282 LKLSGCSVLESFPLEXXXTMXXLRWFDLDRTSIKELPENI----GNLVA 326


>gi|105922680|gb|ABF81430.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1282

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 7/204 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+ L   L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 683 LTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIRILPNNLE-MESLKVCTL 741

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP I+ +M  L  L LD TSI ++PSSI  L GL LL +N CKNL  +PSSI
Sbjct: 742 DGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSI 801

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LSGC +L+ +P+ LGKVESLEE D  G +  RP   I +  N    +F  
Sbjct: 802 GCLKSLKKLDLSGCSELKCIPENLGKVESLEEFD--GLSNPRPGFGIAVPGNEIPGWF-- 857

Query: 180 CNEPPASASWHLHLPFNLLGKSSC 203
            N     +S  + +P   +G  +C
Sbjct: 858 -NHRSKGSSISVQVPSGRMGFFAC 880



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 189/483 (39%), Gaps = 110/483 (22%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKLKK 67
           ++LD   I E   ++E  + +  L L    N  LS  P  +S+   LR LE       K 
Sbjct: 577 IFLDMPGIKEAQWNMEAFSKMSRLRLLKINNVQLSEGPEDLSNK--LRFLEWHSYPS-KS 633

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P  +  +++L +L++  +SI +            L Y   CK      S+IN    LK 
Sbjct: 634 LPASL-QVDELVELHMANSSIEQ------------LWY--GCK------SAIN----LKI 668

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE-PPAS 186
           +NLS    L   P+  G                        + NL SL   GC       
Sbjct: 669 INLSNSLNLSKTPNLTG------------------------IPNLESLILEGCTSLSEVH 704

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
            S  LH     +   +C    +LP+   + SL    L  C   E   P  I N++ L  L
Sbjct: 705 PSLALHKKLQHVNLVNCKSIRILPNNLEMESLKVCTLDGCSKLEK-FPDIIGNMNCLMVL 763

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
            L+  +   LP+SI  L+ L  L +  CK L+S+P                  +  G LK
Sbjct: 764 RLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIP------------------SSIGCLK 805

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             + K  +  C   LK + +N   +  L E+     +S+P     I  PG++IP WF ++
Sbjct: 806 SLK-KLDLSGC-SELKCIPENLGKVESLEEF---DGLSNPRPGFGIAVPGNEIPGWFNHR 860

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGH 426
           ++GSSI+V  PS        +GF  C  F     S   +           C    +G  +
Sbjct: 861 SKGSSISVQVPS------GRMGFFACVAFNANDESPSLF-----------CHFKANGREN 903

Query: 427 Y-----IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSISDPTWKVK 476
           Y     I F    GH+ SDH+WL +L     +    WQ ES + I LSF S      KV 
Sbjct: 904 YPSPMCINFE---GHLFSDHIWLFYLSFDYLKELQEWQHESFSNIELSFHSYEQGV-KVN 959

Query: 477 RCG 479
            CG
Sbjct: 960 NCG 962



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++ L   L  + L  CK++  LP  +  ++ L    L G 
Sbjct: 686 IPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCKSIRILPNNLE-MESLKVCTLDGC 744

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           SK  +FP+I  + + L+ + L+ T+I  LP+SI  L G  L ++  CKNL+S+PS+I  L
Sbjct: 745 SKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPSSIGCL 804

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +  SGCS+LK + E LGKVESLE
Sbjct: 805 KSLKKLDLSGCSELKCIPENLGKVESLE 832



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDI+  ++       D T I +L  +I  L GL  L++N CKNLE +P 
Sbjct: 744 CSKL----EKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLLSMNSCKNLESIPS 799

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  LK L  L+LSG S+ +  PE
Sbjct: 800 SIGCLKSLKKLDLSGCSELKCIPE 823



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 34/189 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           +K G++ +RR+SP+EPG  SRLW     + D+   L D     +    IE +F    L +
Sbjct: 534 QKMGKEIIRRESPEEPGRRSRLW----TYKDVCLALMDNIGKEK----IEAIF----LDM 581

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-------------------- 728
            G K  +      S +  L  L ++ + +  E PE  S++                    
Sbjct: 582 PGIKEAQWNMEAFSKMSRLRLLKINNV-QLSEGPEDLSNKLRFLEWHSYPSKSLPASLQV 640

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D+L+E+H+  ++I  L    +      + NL +  NL   P+ + G+ +L  +   GC+ 
Sbjct: 641 DELVELHMANSSIEQLWYGCKSAINLKIINLSNSLNLSKTPN-LTGIPNLESLILEGCTS 699

Query: 789 LKNVTETLG 797
           L  V  +L 
Sbjct: 700 LSEVHPSLA 708


>gi|168044488|ref|XP_001774713.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674013|gb|EDQ60528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 529

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 173/310 (55%), Gaps = 10/310 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L +L L   +S+  +P+ +E L+ L  L L GC +L SLP  + +L  L  L+L
Sbjct: 62  LANLSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSLEELDL 121

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S CS L   P  +A++  L++L L G +S+  +P+ +E L  LE L LN C +L  LP+ 
Sbjct: 122 SHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNCSSLTSLPNK 181

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  L SL+ L+LS C  L N+P+ L  + SL  LD+SG +++    + +  + +L  L  
Sbjct: 182 LRNLSSLEELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDL 241

Query: 178 SGCNEPPASASWHLHL-PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
           SGC+   +  +   +L     L  S C     LP+ LT + SLT+LDLS C     ++P+
Sbjct: 242 SGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCS-SLTSLPN 300

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR--- 291
           +++NL  L+EL LN  ++  +LP  ++ L +L  L+L  C  L SLP    NL  +    
Sbjct: 301 ELENLSFLEELGLNHCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLD 360

Query: 292 ANGCSSLVTL 301
            +GCSSL +L
Sbjct: 361 LSGCSSLTSL 370



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 163/297 (54%), Gaps = 7/297 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L+ L L G +S+T +P+ +  L+ L  L L GC +L+SLP  +++L  L  L+L
Sbjct: 206 LANLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDL 265

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGCS L   P  + ++  L++L L G +S+  +P+ +E L  LE L LN C +L  LP+ 
Sbjct: 266 SGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELENLSFLEELGLNHCSSLTSLPNE 325

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  L SL  L+LSGC  L ++P+ L  + SL  LD+SG +++    + +  + +L +LY 
Sbjct: 326 LTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELANISSLTTLYL 385

Query: 178 SGCNEPPA--SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
            GC+   +  + S H+     L       +  +L  L  + SL  LDL+ C     ++P+
Sbjct: 386 RGCSSLRSLPNESVHISSLTILYFHGYVSLTSLLNELVNLSSLMTLDLNGCS-SLKSLPN 444

Query: 236 DIDNLHSLKELYLN-RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           ++ N  SL  L L+ R +  +LP   + L +L+EL L  C  L SLP    NL  ++
Sbjct: 445 ELTNFTSLTILDLSGRLSLTSLPNEFTNLSSLKELVLSHCSSLTSLPNELTNLSSLK 501



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 162/322 (50%), Gaps = 39/322 (12%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR------------------- 55
           TS+  +P+ I  L+ LE L L GC +L SLP  +++L  LR                   
Sbjct: 5   TSLISLPNEIANLSSLEELYLNGCSSLKSLPNELANLSNLRRLDLRYCSSLTSLPNELAN 64

Query: 56  -----TLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
                 L+LS CS L++ P  + ++  L +L L G +S+  +P+ +  L  LE L L+ C
Sbjct: 65  LSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSLEELDLSHC 124

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFL 168
            +L+ LP+ +  L SL  L LSGC  L ++P+ L  + SLEEL ++  +++    + +  
Sbjct: 125 SSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNCSSLTSLPNKLRN 184

Query: 169 MKNLRSLYFSGC----NEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDL 223
           + +L  L  S C    N P   A+         L  S C     LP+ LT + SLT+LDL
Sbjct: 185 LSSLEELDLSHCSSLTNLPNELANLS---SLTRLDLSGCSSLTSLPNELTNLSSLTRLDL 241

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           S C     ++P+++ NL SL  L L+  ++  +LP  ++ L +L  L+L  C  L SLP 
Sbjct: 242 SGCS-SLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPN 300

Query: 283 IPPNLQFVRA---NGCSSLVTL 301
              NL F+     N CSSL +L
Sbjct: 301 ELENLSFLEELGLNHCSSLTSL 322



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 147/280 (52%), Gaps = 25/280 (8%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIE 96
           C +L SLP  I++L  L  L L+GCS LK  P  +A++ +L +L L   +S+  +P+ + 
Sbjct: 4   CTSLISLPNEIANLSSLEELYLNGCSSLKSLPNELANLSNLRRLDLRYCSSLTSLPNELA 63

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS- 155
            L  L+ L L+ C +L RLP+ +  L SL  L+LSGC  L ++P+ L  + SLEELD+S 
Sbjct: 64  NLSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSLEELDLSH 123

Query: 156 -GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS--------CPVA 206
             + I  P + +  + +L  L  SGC       S    LP  L   SS        C   
Sbjct: 124 CSSLINLP-NELANLSSLTRLVLSGC-------SSLTSLPNELENLSSLEELRLNNCSSL 175

Query: 207 LMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLL 264
             LP+ L  + SL +LDLS C      +P+++ NL SL  L L+  ++  +LP  ++ L 
Sbjct: 176 TSLPNKLRNLSSLEELDLSHCS-SLTNLPNELANLSSLTRLDLSGCSSLTSLPNELTNLS 234

Query: 265 NLEELELEDCKRLQSLPQIPPNLQFVR---ANGCSSLVTL 301
           +L  L+L  C  L SLP    NL  +     +GCSSL +L
Sbjct: 235 SLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSL 274



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 2/156 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L+ LYL G +S+  +P+    ++ L +L   G  +L+SL   + +L  L TL+L
Sbjct: 374 LANISSLTTLYLRGCSSLRSLPNESVHISSLTILYFHGYVSLTSLLNELVNLSSLMTLDL 433

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           +GCS LK  P  + +   L+ L L G  S+  +P+    L  L+ L L+ C +L  LP+ 
Sbjct: 434 NGCSSLKSLPNELTNFTSLTILDLSGRLSLTSLPNEFTNLSSLKELVLSHCSSLTSLPNE 493

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           +  L SLK L+LS C  L ++P+ L  + SL  LD+
Sbjct: 494 LTNLSSLKELDLSSCSSLRSLPNELANLSSLTRLDL 529



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 5/161 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  +    LS  + +R L   +E L  L++L L+GC +L  LP  + 
Sbjct: 52  CSSLTSLPNELANLSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELR 111

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L  L+LS  S     P   ++   L  + L G +++  LP  +E LS      L +
Sbjct: 112 NLSSLEELDLSHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNN 171

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           C +L SLP+ +  L SL  +  S CS L N+   L  + SL
Sbjct: 172 CSSLTSLPNKLRNLSSLEELDLSHCSSLTNLPNELANLSSL 212



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 11/199 (5%)

Query: 613 QFVKMISVD-SGCMSCYKKWGRQTVRRQSPQEP---GNCSRLWEEADEFPDIVQ----VL 664
               +I +D SGC S         +R  S  E     +CS L    +E  ++      VL
Sbjct: 88  NLSSLIRLDLSGCSSLISLPNE--LRNLSSLEELDLSHCSSLINLPNELANLSSLTRLVL 145

Query: 665 SDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEI 724
           S  + +  L   +E L  L +L LN C +L  LP  +  L  L  L+LS  S     P  
Sbjct: 146 SGCSSLTSLPNELENLSSLEELRLNNCSSLTSLPNKLRNLSSLEELDLSHCSSLTNLPNE 205

Query: 725 TSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
            ++   L  + L G +++  LP  +  LS     +L  C +L SLP+ +  L SL  +  
Sbjct: 206 LANLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDL 265

Query: 784 SGCSKLKNVTETLGKVESL 802
           SGCS L ++   L  + SL
Sbjct: 266 SGCSSLTSLPNELTNLSSL 284



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L +L LNGC +L+ LP  ++ L  L  L+L   S     P   ++   L E+ L   
Sbjct: 17  LSSLEELYLNGCSSLKSLPNELANLSNLRRLDLRYCSSLTSLPNELANLSSLKELDLSSC 76

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++R LP  +E LS  I  +L  C +L SLP+ +  L SL  +  S CS L N+   L  
Sbjct: 77  SSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSLEELDLSHCSSLINLPNELAN 136

Query: 799 VESL 802
           + SL
Sbjct: 137 LSSL 140



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 5/161 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  +    LS  + +  L   +  L  L +L L+GC +L  LP  ++
Sbjct: 220 CSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELT 279

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L+ L+LSG S     P    +   L E+ L   +++  LP  +  LS     +L  
Sbjct: 280 NLSSLTRLDLSGCSSLTSLPNELENLSFLEELGLNHCSSLTSLPNELTNLSSLTRLDLSG 339

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           C +L SLP+ +  L SL  +  SGCS L ++   L  + SL
Sbjct: 340 CSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELANISSL 380



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  +    L++ + +  L   +  L  L +L L+ C +L  LP  ++
Sbjct: 148 CSSLTSLPNELENLSSLEELRLNNCSSLTSLPNKLRNLSSLEELDLSHCSSLTNLPNELA 207

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L+ L+LSG S     P   ++   L  + L G +++  LP  +  LS     +L  
Sbjct: 208 NLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSG 267

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           C +L SLP+ +  L SL  +  SGCS L ++   L  +  LE
Sbjct: 268 CSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELENLSFLE 309



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 5/163 (3%)

Query: 645 GNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
            NCS L    ++  ++  +    LS  + +  L   +  L  L +L L+GC +L  LP  
Sbjct: 170 NNCSSLTSLPNKLRNLSSLEELDLSHCSSLTNLPNELANLSSLTRLDLSGCSSLTSLPNE 229

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           ++ L  L+ L+LSG S     P   ++   L  + L G +++  LP  +  LS     +L
Sbjct: 230 LTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDL 289

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             C +L SLP+ +  L  L  +  + CS L ++   L  + SL
Sbjct: 290 SGCSSLTSLPNELENLSFLEELGLNHCSSLTSLPNELTNLSSL 332



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L +L L  C +L  LP  ++ L  L  L+LS  S  R  P    +   L+ + L G 
Sbjct: 41  LSNLRRLDLRYCSSLTSLPNELANLSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGC 100

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  LS     +L  C +L +LP+ +  L SL  +  SGCS L ++   L  
Sbjct: 101 SSLISLPNELRNLSSLEELDLSHCSSLINLPNELANLSSLTRLVLSGCSSLTSLPNELEN 160

Query: 799 VESLE 803
           + SLE
Sbjct: 161 LSSLE 165



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L +L L+GC +L  LP  ++ L  L+ L+LSG S     P   ++   L  ++L G 
Sbjct: 329 LSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELANISSLTTLYLRGC 388

Query: 739 TAIRGLP-ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           +++R LP  S+ + S  IL       +L SL + +  L SL  +  +GCS LK++   L 
Sbjct: 389 SSLRSLPNESVHISSLTILY-FHGYVSLTSLLNELVNLSSLMTLDLNGCSSLKSLPNELT 447

Query: 798 KVESLEV 804
              SL +
Sbjct: 448 NFTSLTI 454



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 1/125 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L +L L+ C +L RLP  +  L  L  L+LSG S     P    +   L E+ L   
Sbjct: 65  LSSLKELDLSSCSSLRRLPNELENLSSLIRLDLSGCSSLISLPNELRNLSSLEELDLSHC 124

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  LS      L  C +L SLP+ +  L SL  +  + CS L ++   L  
Sbjct: 125 SSLINLPNELANLSSLTRLVLSGCSSLTSLPNELENLSSLEELRLNNCSSLTSLPNKLRN 184

Query: 799 VESLE 803
           + SLE
Sbjct: 185 LSSLE 189



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  +    LS  + +  L   +  L  L +L L+GC +L  LP  ++
Sbjct: 316 CSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELTNLSSLTRLDLSGCSSLTSLPNELA 375

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            +  L+TL L G S  R  P  +     L  ++  G  ++  L   +  LS  +  +L  
Sbjct: 376 NISSLTTLYLRGCSSLRSLPNESVHISSLTILYFHGYVSLTSLLNELVNLSSLMTLDLNG 435

Query: 762 CKNLKSLPSTINGLRSLRMMYPSG 785
           C +LKSLP+ +    SL ++  SG
Sbjct: 436 CSSLKSLPNELTNFTSLTILDLSG 459


>gi|28555894|emb|CAD45029.1| NBS-LRR disease resistance protein homologue [Hordeum vulgare]
          Length = 1262

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 179/342 (52%), Gaps = 37/342 (10%)

Query: 1    MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + S+KD+  L L     +  +P S+  L  ++ L L  C  L SLP  +  LK LRT++L
Sbjct: 702  LGSLKDVQTLDLSSCYKLESLPESLGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRTIDL 761

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            SGC KL+ FP+   S+E+L  L L     +  +P S   L  L+ L L ECK L  LP S
Sbjct: 762  SGCKKLETFPESFGSLENLQILNLSNCFELESLPESFGSLKNLQTLNLVECKKLESLPES 821

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYF 177
            + GLK+L+TL+ S C KLE+VP++LG + +L+ L +S    +     S+  +KNL++L  
Sbjct: 822  LGGLKNLQTLDFSVCHKLESVPESLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDL 881

Query: 178  SGCNE----PPASASWHLHLPFNL------------LGK---------SSCPVALMLP-S 211
            SGC +    P +  S       NL            LG+         S C   + LP +
Sbjct: 882  SGCKKLESLPESLGSLENLQILNLSNCFKLESLPESLGRLKNLQTLNISWCTELVFLPKN 941

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELE 270
            L  + +L +LDLS C +   ++P  + +L +L+ L L++     +LP S+ GL NL+ L+
Sbjct: 942  LGNLKNLPRLDLSGC-MKLESLPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLD 1000

Query: 271  LEDCKRLQSLPQI---PPNLQFVRANGCSSLVTL---FGALK 306
            L  C +L+SLP+      NLQ ++ + C  L +L    G LK
Sbjct: 1001 LLVCHKLESLPESLGGLKNLQTLQLSFCHKLESLPESLGGLK 1042



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 172/321 (53%), Gaps = 19/321 (5%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +  L  L L G+  I+E+PSS+  L  L  L L  C N+  +P  +  L+ L+TL+L
Sbjct: 606 ITRLSKLHYLNLSGSRGISEIPSSVGKLVSLVHLDLSYCTNVKVIPKALGILRNLQTLDL 665

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C KL+  P+ + S+++L +L L     +  +P S+  L  ++ L L+ C  L  LP S
Sbjct: 666 SWCEKLESLPESLGSVQNLQRLNLSNCFELEALPESLGSLKDVQTLDLSSCYKLESLPES 725

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  LK+++TL+LS C KL ++P  LG++++L  +D+SG   +     S   ++NL+ L  
Sbjct: 726 LGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRTIDLSGCKKLETFPESFGSLENLQILNL 785

Query: 178 SGCNE----PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAA 232
           S C E    P +  S       NL+    C     LP SL G+ +L  LD S C   E +
Sbjct: 786 SNCFELESLPESFGSLKNLQTLNLV---ECKKLESLPESLGGLKNLQTLDFSVCHKLE-S 841

Query: 233 IPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQ 288
           +P  +  L++L+ L L+  +N V+L  S+  L NL+ L+L  CK+L+SLP+      NLQ
Sbjct: 842 VPESLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGSLENLQ 901

Query: 289 FVRANGCSSLVTL---FGALK 306
            +  + C  L +L    G LK
Sbjct: 902 ILNLSNCFKLESLPESLGRLK 922



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/325 (35%), Positives = 172/325 (52%), Gaps = 27/325 (8%)

Query: 1    MASMKDLSDLYLDGTSITEV-PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  +K+L  + L G    E  P S   L  L++L L  C  L SLP +  SLK L+TL L
Sbjct: 750  LGRLKNLRTIDLSGCKKLETFPESFGSLENLQILNLSNCFELESLPESFGSLKNLQTLNL 809

Query: 60   SGCSKLKKFPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              C KL+  P+ +  +++L  L +     +  VP S+  L  L+ L L+ C NLV L  S
Sbjct: 810  VECKKLESLPESLGGLKNLQTLDFSVCHKLESVPESLGGLNNLQTLKLSVCDNLVSLLKS 869

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYF 177
            +  LK+L+TL+LSGC KLE++P++LG +E+L+ L++S    +     S+  +KNL++L  
Sbjct: 870  LGSLKNLQTLDLSGCKKLESLPESLGSLENLQILNLSNCFKLESLPESLGRLKNLQTLNI 929

Query: 178  SGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGL 228
            S C E        + LP NL        L  S C     LP SL  + +L  L+LS C  
Sbjct: 930  SWCTE-------LVFLPKNLGNLKNLPRLDLSGCMKLESLPDSLGSLENLETLNLSKCFK 982

Query: 229  GEAAIPSDIDNLHSLKEL-YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI---P 284
             E ++P  +  L +L+ L  L  +   +LP S+ GL NL+ L+L  C +L+SLP+     
Sbjct: 983  LE-SLPESLGGLQNLQTLDLLVCHKLESLPESLGGLKNLQTLQLSFCHKLESLPESLGGL 1041

Query: 285  PNLQFVRANGCSSLVTL---FGALK 306
             NLQ +  + C  L +L    G+LK
Sbjct: 1042 KNLQTLTLSVCDKLESLPESLGSLK 1066



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 184/342 (53%), Gaps = 37/342 (10%)

Query: 1    MASMKDLSDLYLDGTSITE-VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + S+K+L  L L G    E +P S+  L  L++L L  C  L SLP ++  LK L+TL +
Sbjct: 870  LGSLKNLQTLDLSGCKKLESLPESLGSLENLQILNLSNCFKLESLPESLGRLKNLQTLNI 929

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            S C++L   P+ + ++++L +L L G   +  +P S+  L  LE L L++C  L  LP S
Sbjct: 930  SWCTELVFLPKNLGNLKNLPRLDLSGCMKLESLPDSLGSLENLETLNLSKCFKLESLPES 989

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYF 177
            + GL++L+TL+L  C KLE++P++LG +++L+ L +S    +     S+  +KNL++L  
Sbjct: 990  LGGLQNLQTLDLLVCHKLESLPESLGGLKNLQTLQLSFCHKLESLPESLGGLKNLQTLTL 1049

Query: 178  SGCNE----PPASASW-HLH------------LPFNL--------LGKSSCPVALMLPSL 212
            S C++    P +  S  +LH            LP +L        L  S C     +P  
Sbjct: 1050 SVCDKLESLPESLGSLKNLHTLKLQVCYKLKSLPESLGSIKNLHTLNLSVCHNLESIPES 1109

Query: 213  TG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELE 270
             G + +L  L+LS+C   E+ IP  + +L +L+ L L+     V+LP ++  L NL+ L+
Sbjct: 1110 VGSLENLQILNLSNCFKLES-IPKSLGSLKNLQTLILSWCTRLVSLPKNLGNLKNLQTLD 1168

Query: 271  LEDCKRLQSLPQ---IPPNLQFVRANGC---SSLVTLFGALK 306
            L  CK+L+SLP       NLQ +  + C    SL  + G+LK
Sbjct: 1169 LSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEILGSLK 1210



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 21/300 (7%)

Query: 1    MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + S+++L  L L     +  +P S+  L  L+ L L  C  L SLP ++  LK L+TL+L
Sbjct: 966  LGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLESLPESLGGLKNLQTLQL 1025

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAE-VPSSIELLPGLELLYLNECKNLVRLPSS 118
            S C KL+  P+ +  +++L  L L      E +P S+  L  L  L L  C  L  LP S
Sbjct: 1026 SFCHKLESLPESLGGLKNLQTLTLSVCDKLESLPESLGSLKNLHTLKLQVCYKLKSLPES 1085

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYF 177
            +  +K+L TLNLS C  LE++P+++G +E+L+ L++S    +     S+  +KNL++L  
Sbjct: 1086 LGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGSLKNLQTLIL 1145

Query: 178  SGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGL 228
            S C          + LP NL        L  S C     LP SL  + +L  L+LS+C  
Sbjct: 1146 SWCTR-------LVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCFK 1198

Query: 229  GEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
             E+ +P  + +L  L+ L L R     +LP S+  L +L+ L L DC +L+ LP+   NL
Sbjct: 1199 LES-LPEILGSLKKLQTLNLFRCGKLESLPESLGSLKHLQTLVLIDCPKLEYLPKSLENL 1257



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 164/327 (50%), Gaps = 34/327 (10%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + ++K+L  L L G   +  +P S+  L  LE L L  C  L SLP ++  L+ L+TL+L
Sbjct: 942  LGNLKNLPRLDLSGCMKLESLPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDL 1001

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAE-VPSSIELLPGLELLYLNECKNLVRLPSS 118
              C KL+  P+ +  +++L  L L      E +P S+  L  L+ L L+ C  L  LP S
Sbjct: 1002 LVCHKLESLPESLGGLKNLQTLQLSFCHKLESLPESLGGLKNLQTLTLSVCDKLESLPES 1061

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYF 177
            +  LK+L TL L  C KL+++P++LG +++L  L++S    +     S+  ++NL+ L  
Sbjct: 1062 LGSLKNLHTLKLQVCYKLKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNL 1121

Query: 178  SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
            S C              F L    S P      SL  + +L  L LS C     ++P ++
Sbjct: 1122 SNC--------------FKL---ESIP-----KSLGSLKNLQTLILSWCT-RLVSLPKNL 1158

Query: 238  DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ------FV 290
             NL +L+ L L+      +LP S+  L NL+ L L +C +L+SLP+I  +L+        
Sbjct: 1159 GNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEILGSLKKLQTLNLF 1218

Query: 291  RANGCSSLVTLFGALKLCRSKYTIINC 317
            R     SL    G+LK  ++   +I+C
Sbjct: 1219 RCGKLESLPESLGSLKHLQT-LVLIDC 1244



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 34/261 (13%)

Query: 52  KCLRTLELSGCS--------------------KL--KKFPQIVASMEDLSKLYLDGT-SI 88
           KCLR L+LSGCS                    KL  ++FP+ +  +  L  L L G+  I
Sbjct: 564 KCLRVLDLSGCSIKDFASALGQLKQLEVLIAQKLQDRQFPESITRLSKLHYLNLSGSRGI 623

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
           +E+PSS+  L  L  L L+ C N+  +P ++  L++L+TL+LS C KLE++P++LG V++
Sbjct: 624 SEIPSSVGKLVSLVHLDLSYCTNVKVIPKALGILRNLQTLDLSWCEKLESLPESLGSVQN 683

Query: 149 LEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSC 203
           L+ L++S    +     S+  +K++++L  S C +    P +  S         L  S C
Sbjct: 684 LQRLNLSNCFELEALPESLGSLKDVQTLDLSSCYKLESLPESLGSLK---NVQTLDLSRC 740

Query: 204 PVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASIS 261
              + LP   G + +L  +DLS C   E   P    +L +L+ L L N     +LP S  
Sbjct: 741 YKLVSLPKNLGRLKNLRTIDLSGCKKLE-TFPESFGSLENLQILNLSNCFELESLPESFG 799

Query: 262 GLLNLEELELEDCKRLQSLPQ 282
            L NL+ L L +CK+L+SLP+
Sbjct: 800 SLKNLQTLNLVECKKLESLPE 820



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L L+ C  L  LP+ +  LK L T++LSG  K   FPE   S + L  ++L     +  L
Sbjct: 735 LDLSRCYKLVSLPKNLGRLKNLRTIDLSGCKKLETFPESFGSLENLQILNLSNCFELESL 794

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P S   L      NL +CK L+SLP ++ GL++L+ +  S C KL++V E+LG + +L+ 
Sbjct: 795 PESFGSLKNLQTLNLVECKKLESLPESLGGLKNLQTLDFSVCHKLESVPESLGGLNNLQT 854



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 1/131 (0%)

Query: 680  LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
            L  L  L L+ C  LE LP ++  LK L TL LS   K    PE   S   L  + L+  
Sbjct: 1017 LKNLQTLQLSFCHKLESLPESLGGLKNLQTLTLSVCDKLESLPESLGSLKNLHTLKLQVC 1076

Query: 740  -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
              ++ LP S+  +      NL  C NL+S+P ++  L +L+++  S C KL+++ ++LG 
Sbjct: 1077 YKLKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGS 1136

Query: 799  VESLEVRLSSW 809
            +++L+  + SW
Sbjct: 1137 LKNLQTLILSW 1147



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  T+++ +  A+ +L  L  L L+ C+ LE LP ++ +++ L  LNLS   +    PE
Sbjct: 641 LSYCTNVKVIPKALGILRNLQTLDLSWCEKLESLPESLGSVQNLQRLNLSNCFELEALPE 700

Query: 724 ITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S   +  + L     +  LP S+  L      +L  C  L SLP  +  L++LR + 
Sbjct: 701 SLGSLKDVQTLDLSSCYKLESLPESLGSLKNVQTLDLSRCYKLVSLPKNLGRLKNLRTID 760

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
            SGC KL+   E+ G +E+L++
Sbjct: 761 LSGCKKLETFPESFGSLENLQI 782



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS    I E+  ++  L  LV L L+ C N++ +P+ +  L+ L TL+LS   K    PE
Sbjct: 617 LSGSRGISEIPSSVGKLVSLVHLDLSYCTNVKVIPKALGILRNLQTLDLSWCEKLESLPE 676

Query: 724 ITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S   L  ++L     +  LP S+  L      +L  C  L+SLP ++  L++++ + 
Sbjct: 677 SLGSVQNLQRLNLSNCFELEALPESLGSLKDVQTLDLSSCYKLESLPESLGSLKNVQTLD 736

Query: 783 PSGCSKLKNVTETLGKVESL 802
            S C KL ++ + LG++++L
Sbjct: 737 LSRCYKLVSLPKNLGRLKNL 756



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 1/124 (0%)

Query: 680  LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
            L  L +L L+GC  LE LP ++ +L+ L TLNLS   K    PE       L  + L   
Sbjct: 945  LKNLPRLDLSGCMKLESLPDSLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLVC 1004

Query: 739  TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
              +  LP S+  L       L  C  L+SLP ++ GL++L+ +  S C KL+++ E+LG 
Sbjct: 1005 HKLESLPESLGGLKNLQTLQLSFCHKLESLPESLGGLKNLQTLTLSVCDKLESLPESLGS 1064

Query: 799  VESL 802
            +++L
Sbjct: 1065 LKNL 1068



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 1/147 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS+  ++  L  +   L  L  L L  CK LE LP ++  LK L TL+ S   K    PE
Sbjct: 785 LSNCFELESLPESFGSLKNLQTLNLVECKKLESLPESLGGLKNLQTLDFSVCHKLESVPE 844

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                + L  + L     +  L  S+  L      +L  CK L+SLP ++  L +L+++ 
Sbjct: 845 SLGGLNNLQTLKLSVCDNLVSLLKSLGSLKNLQTLDLSGCKKLESLPESLGSLENLQILN 904

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSSW 809
            S C KL+++ E+LG++++L+    SW
Sbjct: 905 LSNCFKLESLPESLGRLKNLQTLNISW 931



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 1/120 (0%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
            L L+ C NLE +P ++ +L+ L  LNLS   K    P+   S   L  + L   T +  L
Sbjct: 1095 LNLSVCHNLESIPESVGSLENLQILNLSNCFKLESIPKSLGSLKNLQTLILSWCTRLVSL 1154

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            P ++  L      +L  CK L+SLP ++  L +L+ +  S C KL+++ E LG ++ L+ 
Sbjct: 1155 PKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEILGSLKKLQT 1214



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 1/142 (0%)

Query: 664  LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            LS+   +  L  ++  L  L  L ++ C  L  LP+ +  LK L  L+LSG  K    P+
Sbjct: 905  LSNCFKLESLPESLGRLKNLQTLNISWCTELVFLPKNLGNLKNLPRLDLSGCMKLESLPD 964

Query: 724  ITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
               S + L  ++L     +  LP S+  L      +L  C  L+SLP ++ GL++L+ + 
Sbjct: 965  SLGSLENLETLNLSKCFKLESLPESLGGLQNLQTLDLLVCHKLESLPESLGGLKNLQTLQ 1024

Query: 783  PSGCSKLKNVTETLGKVESLEV 804
             S C KL+++ E+LG +++L+ 
Sbjct: 1025 LSFCHKLESLPESLGGLKNLQT 1046



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
            L L  C  L+ LP ++ ++K L TLNLS        PE   S + L  ++L     +  +
Sbjct: 1071 LKLQVCYKLKSLPESLGSIKNLHTLNLSVCHNLESIPESVGSLENLQILNLSNCFKLESI 1130

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            P S+  L       L  C  L SLP  +  L++L+ +  SGC KL+++ ++LG +E+L+ 
Sbjct: 1131 PKSLGSLKNLQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCKKLESLPDSLGSLENLQT 1190



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 1/120 (0%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
            L L+ C  LE +P+++ +LK L TL LS  ++    P+   +   L  + L G   +  L
Sbjct: 1119 LNLSNCFKLESIPKSLGSLKNLQTLILSWCTRLVSLPKNLGNLKNLQTLDLSGCKKLESL 1178

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            P S+  L      NL +C  L+SLP  +  L+ L+ +    C KL+++ E+LG ++ L+ 
Sbjct: 1179 PDSLGSLENLQTLNLSNCFKLESLPEILGSLKKLQTLNLFRCGKLESLPESLGSLKHLQT 1238



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 23/117 (19%)

Query: 680  LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
            L  L  L L+GCK LE LP ++ +L+ L TLNLS   K    PEI  S  +L  +     
Sbjct: 1161 LKNLQTLDLSGCKKLESLPDSLGSLENLQTLNLSNCFKLESLPEILGSLKKLQTL----- 1215

Query: 740  AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
                              NL  C  L+SLP ++  L+ L+ +    C KL+ + ++L
Sbjct: 1216 ------------------NLFRCGKLESLPESLGSLKHLQTLVLIDCPKLEYLPKSL 1254



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 9/161 (5%)

Query: 649 RLWEEADEFPDIVQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +L   A  F   ++VL   G  I++ + A+  L  L  L     ++  + P +I+ L  L
Sbjct: 554 KLHGSAFSFQKCLRVLDLSGCSIKDFASALGQLKQLEVLIAQKLQD-RQFPESITRLSKL 612

Query: 708 STLNLSGLSKFREFPEITSSRDQLLE-IHLE---GTAIRGLPASIELLSGNILSNLKDCK 763
             LNLSG    R   EI SS  +L+  +HL+    T ++ +P ++ +L      +L  C+
Sbjct: 613 HYLNLSG---SRGISEIPSSVGKLVSLVHLDLSYCTNVKVIPKALGILRNLQTLDLSWCE 669

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            L+SLP ++  +++L+ +  S C +L+ + E+LG ++ ++ 
Sbjct: 670 KLESLPESLGSVQNLQRLNLSNCFELEALPESLGSLKDVQT 710


>gi|356524097|ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 205/489 (41%), Gaps = 108/489 (22%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTIS-------------- 49
            +K L  L+ DGT+ITE+P SI  LT LE L L+GCK+L  LP +I               
Sbjct: 763  LKSLKALHADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSG 822

Query: 50   ---------SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
                     SL  L  L L  C  L   P  + S+  L++L+ + T I E+PS+I  L  
Sbjct: 823  LEELPDSIGSLNNLERLNLMWCESLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYY 882

Query: 101  LELLYLNECKNLVRLPSSINGLKSLKTLNLSG-----------------------CCKLE 137
            L  L +  CK L +LP+SI  L S+  L L G                       C  LE
Sbjct: 883  LRELSVGNCKFLSKLPNSIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMNCKNLE 942

Query: 138  NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHLP 194
             +P+++G +  L  L++    IR    SI  ++NL +L  + C   ++ PAS   +L   
Sbjct: 943  YLPESIGHLAFLTTLNMFNGNIRELPESIGWLENLVTLRLNKCKMLSKLPASIG-NLKSL 1001

Query: 195  FNLLGKSSCPVAL----------------------------------------MLPSLTG 214
            ++   + +C  +L                                        + PS   
Sbjct: 1002 YHFFMEETCVASLPESFGRLSSLRTLRIAKRPNLNTNENSFLAEPEENHNSFVLTPSFCN 1061

Query: 215  VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
            +  LT+LD     +    IP + + L  L+ L L  N+F  LP+S+ GL  L+ L L +C
Sbjct: 1062 LTLLTELDARSWRIS-GKIPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNC 1120

Query: 275  KRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK-YTIINCIDSLKLLRKNGLAISM 333
             +L SLP +P +L  +    C +L T+     L   K   + NC+    +    GL  S+
Sbjct: 1121 TQLISLPSLPSSLIELNVENCYALETIHDMSNLESLKELKLTNCVKVRDIPGLEGLK-SL 1179

Query: 334  LREYLE--LQAVSDPGHKLSIV---------FPGSQIPKWFMYQNEGSSITVTRPSYLYN 382
             R YL   +   S    +LS V          PG ++P+WF     G ++  ++P  L  
Sbjct: 1180 RRLYLSGCVACSSQIRKRLSKVVLKNLQNLSMPGGKLPEWF----SGQTVCFSKPKNLEL 1235

Query: 383  VNKVVGFAI 391
               +VG  +
Sbjct: 1236 KGVIVGVVL 1244



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 152/328 (46%), Gaps = 38/328 (11%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            ++T +  SI  L+ L  L L  C +L +LP+ +S LK L +L LSGC+KLK  P+ +  +
Sbjct: 704  NLTNIHDSIGSLSTLRSLKLTRCSSLINLPIDVSGLKQLESLFLSGCTKLKSLPENIGIL 763

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT-------- 127
            + L  L+ DGT+I E+P SI  L  LE L L  CK+L RLPSSI  L SLK         
Sbjct: 764  KSLKALHADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGL 823

Query: 128  ---------------LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
                           LNL  C  L  +PD++G + SL +L  + T I+   S+I  +  L
Sbjct: 824  EELPDSIGSLNNLERLNLMWCESLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYYL 883

Query: 173  RSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-LTKLDLSDCG 227
            R L    C      P +  +    +   L G +       LP   G    L KL++ +C 
Sbjct: 884  RELSVGNCKFLSKLPNSIKTLASVVELQLDGTTITD----LPDEIGEMKLLRKLEMMNCK 939

Query: 228  LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
              E  +P  I +L  L  L +   N   LP SI  L NL  L L  CK L  LP    NL
Sbjct: 940  NLE-YLPESIGHLAFLTTLNMFNGNIRELPESIGWLENLVTLRLNKCKMLSKLPASIGNL 998

Query: 288  Q-----FVRANGCSSLVTLFGALKLCRS 310
            +     F+     +SL   FG L   R+
Sbjct: 999  KSLYHFFMEETCVASLPESFGRLSSLRT 1026



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L  C +L  LP  +S LK L +L LSG +K +  PE       L  +H +GTAI 
Sbjct: 718 LRSLKLTRCSSLINLPIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALHADGTAIT 777

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR--MMYPSGCSKLKNVTETLGKVE 800
            LP SI  L+      L+ CK+L+ LPS+I  L SL+   +Y SG  +L +   +L  +E
Sbjct: 778 ELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNLE 837

Query: 801 SLEV 804
            L +
Sbjct: 838 RLNL 841



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 29/176 (16%)

Query: 645  GNC---SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
            GNC   S+L         +V++  DGT I +L   I  +  L +L +  CKNLE LP +I
Sbjct: 889  GNCKFLSKLPNSIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMNCKNLEYLPESI 948

Query: 702  SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
              L +L+TLN+                         G  IR LP SI  L   +   L  
Sbjct: 949  GHLAFLTTLNM-----------------------FNGN-IRELPESIGWLENLVTLRLNK 984

Query: 762  CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQND 817
            CK L  LP++I  L+SL   +      + ++ E+ G++ SL   L    RP +  +
Sbjct: 985  CKMLSKLPASIGNLKSLYHFFMEETC-VASLPESFGRLSSLRT-LRIAKRPNLNTN 1038



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 12/147 (8%)

Query: 665 SDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEI 724
           +DGT I EL  +I  L  L +L L GCK+L RLP +I  L  L  L+L   S   E P+ 
Sbjct: 771 ADGTAITELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQ-SGLEELPDS 829

Query: 725 TSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK---DCKNLKSLPSTINGLRSLRM 780
             S + L  ++L    ++  +P SI    G+++S  +   +   +K LPSTI  L  LR 
Sbjct: 830 IGSLNNLERLNLMWCESLTVIPDSI----GSLISLTQLFFNSTKIKELPSTIGSLYYLRE 885

Query: 781 MYPSGC---SKLKNVTETLGKVESLEV 804
           +    C   SKL N  +TL  V  L++
Sbjct: 886 LSVGNCKFLSKLPNSIKTLASVVELQL 912



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 25/160 (15%)

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN 181
           ++L  LNLS C +L  +PD  G    LE++D+     +     SI  +  LRSL  + C 
Sbjct: 669 RNLMVLNLSYCIELTAIPDLSG-CRRLEKIDLENCINLTNIHDSIGSLSTLRSLKLTRC- 726

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                 S  ++LP +               ++G+  L  L LS C     ++P +I  L 
Sbjct: 727 ------SSLINLPID---------------VSGLKQLESLFLSGCT-KLKSLPENIGILK 764

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           SLK L+ +      LP SI  L  LE L LE CK L+ LP
Sbjct: 765 SLKALHADGTAITELPRSIFRLTKLERLVLEGCKHLRRLP 804



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 7/110 (6%)

Query: 193 LPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
           +P NL  L  S C     +P L+G   L K+DL +C +    I   I +L +L+ L L R
Sbjct: 667 VPRNLMVLNLSYCIELTAIPDLSGCRRLEKIDLENC-INLTNIHDSIGSLSTLRSLKLTR 725

Query: 251 -NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCS 296
            ++ + LP  +SGL  LE L L  C +L+SLP+   I  +L+ + A+G +
Sbjct: 726 CSSLINLPIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALHADGTA 775


>gi|227438235|gb|ACP30607.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1128

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 200/410 (48%), Gaps = 85/410 (20%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + + + L  L L+G  S+ E+P  +  +  L  L ++GC +L  LP    +L  ++TL L
Sbjct: 656 LQNAESLQRLSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHM--NLISMKTLIL 713

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + CS L++F  I  ++E L    LDGT+I+++P+                 N+V+L    
Sbjct: 714 TNCSSLQEFRVISDNLETLK---LDGTAISQLPA-----------------NMVKL---- 749

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              + L  LNL  C  LE VP++LGK++ L+EL +SG +  +  +    ++N++ L    
Sbjct: 750 ---QRLMVLNLKDCIMLEAVPESLGKLKKLQELVLSGCS--KLKTFPIPIENMKRL---- 800

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                      ++L   T +  + K+   +     + I   ++ 
Sbjct: 801 --------------------------QILLLDTTAITDMPKILQFN-----SQIKCGMNG 829

Query: 240 LHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           L SL+ L L+RNN +T L  +IS L +L  L+++ CK L S+P +PPNL+ + A+GC  L
Sbjct: 830 LSSLRHLCLSRNNMITNLQVNISQLHHLRLLDVKYCKNLTSIPLLPPNLEVLDAHGCEKL 889

Query: 299 VTLFGALKLCR------SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK--- 349
            T+   L L +      SK+   NC ++L+ + KN + +     Y + ++  D G+    
Sbjct: 890 KTVATPLALLKLMEQVHSKFIFTNC-NNLEQVAKNSITV-----YAQRKSQQDAGNVSEA 943

Query: 350 -LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP 398
            L   FPGS++P WF ++  GSS+ +  P +  + N++    +C V   P
Sbjct: 944 LLITSFPGSEVPSWFNHRTIGSSLKLKFPPHWCD-NRLSTIVLCAVVSFP 992



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 19/143 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP-------------------E 723
           L +L+L GCK+L+ LPR ++ +K L  LN+ G +  R  P                   E
Sbjct: 662 LQRLSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHMNLISMKTLILTNCSSLQE 721

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                D L  + L+GTAI  LPA++  L   ++ NLKDC  L+++P ++  L+ L+ +  
Sbjct: 722 FRVISDNLETLKLDGTAISQLPANMVKLQRLMVLNLKDCIMLEAVPESLGKLKKLQELVL 781

Query: 784 SGCSKLKNVTETLGKVESLEVRL 806
           SGCSKLK     +  ++ L++ L
Sbjct: 782 SGCSKLKTFPIPIENMKRLQILL 804



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 43/231 (18%)

Query: 646 NCSRLWEEADEFPDIVQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           NCS L +E     D ++ L  DGT I +L   +  L  L+ L L  C  LE +P ++  L
Sbjct: 715 NCSSL-QEFRVISDNLETLKLDGTAISQLPANMVKLQRLMVLNLKDCIMLEAVPESLGKL 773

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS------------ 752
           K L  L LSG SK + FP    +  +L  + L+ TAI  +P  ++  S            
Sbjct: 774 KKLQELVLSGCSKLKTFPIPIENMKRLQILLLDTTAITDMPKILQFNSQIKCGMNGLSSL 833

Query: 753 -------GNILSNL---------------KDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
                   N+++NL               K CKNL S+P       +L ++   GC KLK
Sbjct: 834 RHLCLSRNNMITNLQVNISQLHHLRLLDVKYCKNLTSIPLLPP---NLEVLDAHGCEKLK 890

Query: 791 NVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDS 841
            V   L  ++ +E   S +      N    +EQ A  ++T  A+ +  +D+
Sbjct: 891 TVATPLALLKLMEQVHSKFIFTNCNN----LEQVAKNSITVYAQRKSQQDA 937


>gi|357474825|ref|XP_003607698.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508753|gb|AES89895.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1165

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 216/458 (47%), Gaps = 49/458 (10%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            LRTLEL     L K P     + +L +L L G   + ++  SI +L  L  L L +CKNL
Sbjct: 634  LRTLELRNSKSLIKVPDF-GEIPNLERLNLKGCVKLEQIDPSISVLRKLVYLNLEDCKNL 692

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
            V +P+ + GL SL+ LNLSGC K  N   +L     ++  + +  +  + +   ++   L
Sbjct: 693  VTIPNDLFGLTSLEYLNLSGCYKAFNT--SLHLKNYIDSSESASHSQSKFSIFDWITLPL 750

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
            +S++      P  +    L +P       SC    +LPSL  +  L KLD+S C L +  
Sbjct: 751  QSMF------PKENLDMGLAIP-------SC----LLPSLPSLSCLRKLDISYCSLSQ-- 791

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            IP  I  L  L+ L L  NNFVTLP S   L  L  L LE+C +L+  P++P        
Sbjct: 792  IPDAIGCLLWLERLNLGGNNFVTLP-SFRELSKLAYLNLENCMQLKYFPELPSASSIEHE 850

Query: 293  NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYL---ELQAVSDPGHK 349
            +      T +      R+   I NC +  ++ + + LA S + ++L   +L++ S    +
Sbjct: 851  HSHMFSDTSYWR----RAGLCIFNCPELGEMEKCSDLAFSWMIQFLQANQLESSSVFFRE 906

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ-VPKHSTGTYLFH 408
            ++IV PG+++P+WF  QN  SSI++     +++ + V+ FA C VF   P  ST     +
Sbjct: 907  INIVIPGTEMPRWFNNQNMESSISIDISPIMHHDSDVIAFACCVVFSAAPYPSTNMKTNY 966

Query: 409  SYPAHELECSMDGSGEGHYIYFRGKFGH-----VVSDHLWLLFLPRHGH---NWQFESNL 460
              P   L C   G  E     F G   H     + S+H+WL +  R          +S L
Sbjct: 967  RKPVIHL-CFSSGDLE----VFLGIPAHTNLNMLKSNHIWLAYFTRESFIDLMSDIDSTL 1021

Query: 461  --IRLSFRSISDPTW--KVKRCGFHPIYMHEVEEFDET 494
              IR+    +       +VK CG+  +Y H+++  + T
Sbjct: 1022 GDIRMEVLIVDGEGLDVEVKNCGYRWVYKHDLQHLNFT 1059



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 7/116 (6%)

Query: 681 FGLVQLTL--NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           + LV+L L  +  K L    + +  L+ L   N   L K  +F EI +    L  ++L+G
Sbjct: 609 YQLVELILEDSSIKQLWEGTKYLPNLRTLELRNSKSLIKVPDFGEIPN----LERLNLKG 664

Query: 739 -TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
              +  +  SI +L   +  NL+DCKNL ++P+ + GL SL  +  SGC K  N +
Sbjct: 665 CVKLEQIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTSLEYLNLSGCYKAFNTS 720



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 9/163 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L G   + ++  SI +L  L  L L+ CKNL ++P  +  L  L  L L
Sbjct: 651 FGEIPNLERLNLKGCVKLEQIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTSLEYLNL 710

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-VRLPS- 117
           SGC K       + +  D S+      S   +   I L   L+ ++  E  ++ + +PS 
Sbjct: 711 SGCYKAFNTSLHLKNYIDSSESASHSQSKFSIFDWITL--PLQSMFPKENLDMGLAIPSC 768

Query: 118 ---SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
              S+  L  L+ L++S  C L  +PD +G +  LE L++ G 
Sbjct: 769 LLPSLPSLSCLRKLDIS-YCSLSQIPDAIGCLLWLERLNLGGN 810


>gi|255537137|ref|XP_002509635.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223549534|gb|EEF51022.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1034

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 136/283 (48%), Gaps = 74/283 (26%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL GT+I EVPSS+  L+ L  L L  C  L SLP +I  +K L  L LSGC+ LK FP
Sbjct: 717 LYLYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSLPTSICKIKSLELLCLSGCTNLKHFP 776

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           +I  +M+ L +LYLDGT+IA++P S+E L  L  L L+ C+NLV LP SI+ LK L +L+
Sbjct: 777 EISETMDCLVELYLDGTAIADLPLSVENLKRLSSLSLSNCRNLVCLPESISKLKHLSSLD 836

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            S C KLE +P         EEL VS   I R                            
Sbjct: 837 FSDCPKLEKLP---------EELIVSLELIAR---------------------------- 859

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                        C ++ +   L+G+  L+ LDLS                         
Sbjct: 860 ------------GCHLSKLASDLSGLSCLSFLDLS------------------------- 882

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +  F TLP SI  L  L  L++  C RL+SLP +  +LQF++A
Sbjct: 883 KTKFETLPPSIKQLSQLITLDISFCDRLESLPDLSLSLQFIQA 925



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 6/168 (3%)

Query: 655 DEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           + FPD+ + +      GT I E+  ++  L  LV L L  C  L+ LP +I  +K L  L
Sbjct: 705 ERFPDVSRSIRFLYLYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSLPTSICKIKSLELL 764

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
            LSG +  + FPEI+ + D L+E++L+GTAI  LP S+E L      +L +C+NL  LP 
Sbjct: 765 CLSGCTNLKHFPEISETMDCLVELYLDGTAIADLPLSVENLKRLSSLSLSNCRNLVCLPE 824

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDF 818
           +I+ L+ L  +  S C KL+ + E L  + SLE+     +  K+ +D 
Sbjct: 825 SISKLKHLSSLDFSDCPKLEKLPEEL--IVSLELIARGCHLSKLASDL 870



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 87/140 (62%), Gaps = 6/140 (4%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +M  L +LYLDGT+I ++P S+E L  L  L+L  C+NL  LP +IS LK L +L+ S C
Sbjct: 781 TMDCLVELYLDGTAIADLPLSVENLKRLSSLSLSNCRNLVCLPESISKLKHLSSLDFSDC 840

Query: 63  SKLKKFP-QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            KL+K P +++ S+E +++    G  ++++ S +  L  L  L L++ K    LP SI  
Sbjct: 841 PKLEKLPEELIVSLELIAR----GCHLSKLASDLSGLSCLSFLDLSKTK-FETLPPSIKQ 895

Query: 122 LKSLKTLNLSGCCKLENVPD 141
           L  L TL++S C +LE++PD
Sbjct: 896 LSQLITLDISFCDRLESLPD 915



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 46/199 (23%)

Query: 657 FPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP+I       V++  DGT I +L L++E L  L  L+L+ C+NL  LP +IS LK+LS+
Sbjct: 775 FPEISETMDCLVELYLDGTAIADLPLSVENLKRLSSLSLSNCRNLVCLPESISKLKHLSS 834

Query: 710 LNLSGLSKFREFPEITSSRDQLLE--------------------IHLEGTAIRGLPASIE 749
           L+ S   K  + PE      +L+                     + L  T    LP SI+
Sbjct: 835 LDFSDCPKLEKLPEELIVSLELIARGCHLSKLASDLSGLSCLSFLDLSKTKFETLPPSIK 894

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP-------------------SGCSKLK 790
            LS  I  ++  C  L+SLP     L+ ++ +Y                    +G S +K
Sbjct: 895 QLSQLITLDISFCDRLESLPDLSLSLQFIQAIYARAEHVALFYRPFYCNELAYNGFSVIK 954

Query: 791 NVTETLGKVESLEVRLSSW 809
              E LG +E +    ++W
Sbjct: 955 QYEENLGSIEFVLAFENNW 973



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 114/264 (43%), Gaps = 50/264 (18%)

Query: 78  LSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
           L  LY +G     +P++      +EL +L   K L RLP     LK LK ++LS   +L 
Sbjct: 602 LQYLYWNGYPSKTLPANFHPKDLVEL-HLPSSK-LKRLPWKNMDLKKLKEIDLSWSSRLT 659

Query: 138 NVPDTLGKVESLEELDVSGTA-IRRPTSSIFL--------------------MKNLRSLY 176
            VP+ L +  +L  +++S +  IRR  S+I L                     +++R LY
Sbjct: 660 TVPE-LSRATNLTCINLSDSKRIRRFPSTIGLDSLETLNLSDCVKLERFPDVSRSIRFLY 718

Query: 177 FSGC--NEPPASASWHLHL-PFNL--------LGKSSCPV-ALMLPSLTGVCSLTKL--- 221
             G    E P+S      L   NL        L  S C + +L L  L+G  +L      
Sbjct: 719 LYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSLPTSICKIKSLELLCLSGCTNLKHFPEI 778

Query: 222 -DLSDC-------GLGEAAIPSDIDNL-HSLKELYLNRNNFVTLPASISGLLNLEELELE 272
            +  DC       G   A +P  ++NL         N  N V LP SIS L +L  L+  
Sbjct: 779 SETMDCLVELYLDGTAIADLPLSVENLKRLSSLSLSNCRNLVCLPESISKLKHLSSLDFS 838

Query: 273 DCKRLQSLP-QIPPNLQFVRANGC 295
           DC +L+ LP ++  +L+ + A GC
Sbjct: 839 DCPKLEKLPEELIVSLELI-ARGC 861


>gi|449482303|ref|XP_004156242.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1633

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/284 (40%), Positives = 153/284 (53%), Gaps = 19/284 (6%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + E+  SI  L  L LL L+GC +L   P  I   K L+TL+LSG + L+ FP+I   ME
Sbjct: 671 LCEIHPSINSLNKLILLDLEGCGDLKHFPANIRC-KNLQTLKLSG-TGLEIFPEI-GHME 727

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L+ L+LDG++I     SI  L GL  L L+ C  L  LP  I  LKSLKTL L  C KL
Sbjct: 728 HLTHLHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSLKTLLLKYCKKL 787

Query: 137 ENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP- 194
           + +P +L   ESLE L +S T+I   P S I  +KNL++L   G     +   W   LP 
Sbjct: 788 DKIPPSLANAESLETLSISETSITHVPPSIIHCLKNLKTLDCEGL----SHGIWKSLLPQ 843

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
           FN+    +          TG+  L  L+L  C L +  IP D+    SL+ L L+ NNF 
Sbjct: 844 FNINQTIT----------TGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFT 893

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           TLP S+S L  L+ L L  C  L+ LP++P +LQ+V    C S+
Sbjct: 894 TLPDSLSHLKKLKTLNLNCCTELKDLPKLPESLQYVGGIDCRSM 937



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 103/196 (52%), Gaps = 17/196 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+ L+ L+LDG++IT    SI  LTGL  L L  C  LSSLP  I +LK L+TL L 
Sbjct: 723 IGHMEHLTHLHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSLKTLLLK 782

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSS-IELLPGLELLYLNECKNLVR----- 114
            C KL K P  +A+ E L  L +  TSI  VP S I  L  L+ L   +C+ L       
Sbjct: 783 YCKKLDKIPPSLANAESLETLSISETSITHVPPSIIHCLKNLKTL---DCEGLSHGIWKS 839

Query: 115 -LPS-SIN-----GLKSLKTLNLSGCCKL-ENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
            LP  +IN     GL  LK LNL GC  + E++P+ L    SLE LD+S         S+
Sbjct: 840 LLPQFNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPDSL 899

Query: 167 FLMKNLRSLYFSGCNE 182
             +K L++L  + C E
Sbjct: 900 SHLKKLKTLNLNCCTE 915



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 14/164 (8%)

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV----------- 397
            K  ++  G +IPK+F  Q++G+   +  P YL    + +G A+C +  V           
Sbjct: 1456 KFDLLLHGDKIPKFFSNQSKGNMTEIKLPQYLEKFRESIGVAVCALVVVDKKRRKLNEII 1515

Query: 398  PKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHN--WQ 455
            P+    T +       +++         H+   +       S  LWL ++P HG N  W 
Sbjct: 1516 PERERYTKVVDLICKFKVDSYQIMPEHCHFTSQQKLLSEYASQFLWLSYIPLHGFNINWH 1575

Query: 456  FESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQST 499
            + +    ++  +  D  + VK CG H I+ HE    D+   +ST
Sbjct: 1576 YCTQF-EIALETSCDELFGVKNCGLHLIHKHERMMIDKMVMEST 1618



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 3/141 (2%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL +   + E+  +I  L  L+ L L GC +L+  P  I   K L TL LSG +    FP
Sbjct: 664 VLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANIRC-KNLQTLKLSG-TGLEIFP 721

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI    + L  +HL+G+ I     SI  L+G +  +L  C  L SLP  I  L+SL+ + 
Sbjct: 722 EI-GHMEHLTHLHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSLKTLL 780

Query: 783 PSGCSKLKNVTETLGKVESLE 803
              C KL  +  +L   ESLE
Sbjct: 781 LKYCKKLDKIPPSLANAESLE 801



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 33/150 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSS-IELLTGLELLTLKGCKN---LSSLP------VTISS 50
           +A+ + L  L +  TSIT VP S I  L  L+ L  +G  +    S LP         + 
Sbjct: 794 LANAESLETLSISETSITHVPPSIIHCLKNLKTLDCEGLSHGIWKSLLPQFNINQTITTG 853

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           L CL+ L L GC  + +                      ++P  +     LE L L+   
Sbjct: 854 LGCLKALNLMGCKLMDE----------------------DIPEDLHCFSSLETLDLS-YN 890

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
           N   LP S++ LK LKTLNL+ C +L+++P
Sbjct: 891 NFTTLPDSLSHLKKLKTLNLNCCTELKDLP 920



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 95/233 (40%), Gaps = 10/233 (4%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE L L  C  L  +  SIN L  L  L+L GC  L++ P  + + ++L+ L +SGT
Sbjct: 657 VPNLERLVLCNCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANI-RCKNLQTLKLSGT 715

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
            +      I  M++L  L+  G N      S         L  SSC     LP   G   
Sbjct: 716 GL-EIFPEIGHMEHLTHLHLDGSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLK 774

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
             K  L         IP  + N  SL+ L ++  +   +P SI  +  L+ L+  DC+ L
Sbjct: 775 SLKTLLLKYCKKLDKIPPSLANAESLETLSISETSITHVPPSI--IHCLKNLKTLDCEGL 832

Query: 278 QS------LPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLL 324
                   LPQ   N       GC   + L G   +       ++C  SL+ L
Sbjct: 833 SHGIWKSLLPQFNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETL 885


>gi|451798982|gb|AGF69189.1| TMV resistance protein N-like protein 3 [Vitis labrusca]
          Length = 1524

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 199/465 (42%), Gaps = 109/465 (23%)

Query: 98   LPGLELLYL-----NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
            +P LE+L L     + C NL  LP +I  LK L+ L+ +GC KLE  P+  G +  L  L
Sbjct: 648  VPNLEILILIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVL 707

Query: 153  DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH-LPFNLLGKSSCPVALMLPS 211
            D+SGTAI    SSI  +  L++L    C++        LH +P ++   SS  V      
Sbjct: 708  DLSGTAIMDLPSSITHLNGLQTLLLQECSK--------LHKIPIHICHLSSLEV------ 753

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
                     LDL  C + E  IPSDI +L SL++L L R +F ++P +I+ L +LE L L
Sbjct: 754  ---------LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNL 804

Query: 272  EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAI 331
              C  L+ + ++P  L+ + A+G +   +    L L    ++++NC    +  +      
Sbjct: 805  SHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFLPL----HSLVNCFRWAQDWKHTSFRD 860

Query: 332  SMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
            S           S  G    IV PGS  IP+W + + +  S  +  P   +  N+ +GFA
Sbjct: 861  S-----------SYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIELPQNWHQNNEFLGFA 909

Query: 391  ICCVF--------QVPK-----------------HSTGTY--------LFHSYPAHE--- 414
            ICCV+         +P+                  ST ++        +  S+  +E   
Sbjct: 910  ICCVYVPLSDESEDIPEKESAHGPENESDNKSEDESTHSWENERDDKSVAESFHKNEHKH 969

Query: 415  -----LECSMDGSGEGHYIYF----------------RGKFGHVVSDHLWLL-----FLP 448
                 LEC +   G+     F                +G+    VS   W++      +P
Sbjct: 970  THSCRLECFLGALGDSFDFQFVDRPGFQSTCFCYKEDKGEDNESVSGQTWVVCYSKAAIP 1029

Query: 449  RHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDE 493
               H++Q    L R  F   S+   KVK CG   IY  ++++  E
Sbjct: 1030 EMFHSYQLTDILAR--FHIYSEKALKVKECGVRLIYSQDLQQSHE 1072



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 126/250 (50%), Gaps = 50/250 (20%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP     L  L+ L L+ CKNL+SLP +I   K L TL  SGCS+L+  P+I+ 
Sbjct: 1096 GSDMNEVPIIGNPLE-LDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQ 1154

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KL L GT+I E+PSSI+ L GL+ L L+ CKNLV LP SI  L SLK L +  C
Sbjct: 1155 DMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESC 1214

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
               + +PD LG+++SL  L V       P  S+                           
Sbjct: 1215 PSFKKLPDNLGRLQSLLHLSVG------PLDSM--------------------------- 1241

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                           LPSL+G+CSL +L+L  C + E  IPS+I  L SL   +  R + 
Sbjct: 1242 ------------NFQLPSLSGLCSLRQLELQACNIRE--IPSEICYLSSLGREF--RRSV 1285

Query: 254  VTLPASISGL 263
             T  A  +G+
Sbjct: 1286 RTFFAESNGI 1295



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 34  TLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPS 93
           T+ GC NL  LP  I  LK L+ L  +GCSKL++FP+I  +M  L  L L GT+I ++PS
Sbjct: 660 TMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPS 719

Query: 94  SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEEL 152
           SI  L GL+ L L EC  L ++P  I  L SL+ L+L  C  +E  +P  +  + SL++L
Sbjct: 720 SITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKL 779

Query: 153 DVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           ++         ++I  + +L  L  S CN
Sbjct: 780 NLERGHFSSIPTTINQLSSLEVLNLSHCN 808



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ + I     L  L L  CKNL  LP +I   K L+TL+ SG S+    PEI  
Sbjct: 1096 GSDMNEVPI-IGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQ 1154

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L ++ L GTAI+ +P+SI+ L G     L +CKNL +LP +I  L SL+ +    C
Sbjct: 1155 DMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESC 1214

Query: 787  SKLKNVTETLGKVESL 802
               K + + LG+++SL
Sbjct: 1215 PSFKKLPDNLGRLQSL 1230



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 62/108 (57%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+  T++GC NLE LPR I  LK+L  L+ +G SK   FPEI  +  +L  + L GTAI 
Sbjct: 656 LIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 715

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            LP+SI  L+G     L++C  L  +P  I  L SL ++    C+ ++
Sbjct: 716 DLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIME 763



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 699 GNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGH 758

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL---VRLPS 117
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL     LPS
Sbjct: 759 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPS 818

Query: 118 SINGLKS 124
            +  L +
Sbjct: 819 CLRLLDA 825



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 30/171 (17%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L L GT+I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+ L + 
Sbjct: 1153 LQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVE 1212

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             C   KK P  +  ++ L  L     S+  + S    LP                  S++
Sbjct: 1213 SCPSFKKLPDNLGRLQSLLHL-----SVGPLDSMNFQLP------------------SLS 1249

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
            GL SL+ L L   C +  +P  +  + SL      G   RR   + F   N
Sbjct: 1250 GLCSLRQLELQA-CNIREIPSEICYLSSL------GREFRRSVRTFFAESN 1293



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 147/369 (39%), Gaps = 63/369 (17%)

Query: 203  CPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
            C     LPS + G  SL  L  S C   E+ IP  + ++ SL++L L+      +P+SI 
Sbjct: 1119 CKNLTSLPSSIFGFKSLATLSCSGCSQLES-IPEILQDMESLRKLSLSGTAIKEIPSSIQ 1177

Query: 262  GLLNLEELELEDCKRLQSLPQIPPNL---QFVRANGCSSLVTLFGALKLCRSKYTI-INC 317
             L  L+ L L +CK L +LP+   NL   +F+    C S   L   L   +S   + +  
Sbjct: 1178 RLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGP 1237

Query: 318  IDSLKLLRKNGLAISMLREYLELQA------------VSDPGHKL-----SIVFPGSQIP 360
            +DS+     +   +  LR+ LELQA            +S  G +      +     + IP
Sbjct: 1238 LDSMNFQLPSLSGLCSLRQ-LELQACNIREIPSEICYLSSLGREFRRSVRTFFAESNGIP 1296

Query: 361  KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS----------- 409
            +W  +Q  G  IT+  P   Y  +  +GF +C ++   +  T T+   S           
Sbjct: 1297 EWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDS 1356

Query: 410  ------YPAHELECSM--DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLI 461
                        EC    D S +G  +Y+        SD      +P   H+ ++ +   
Sbjct: 1357 FLFDDLRLEQICECCYYEDASNQGLLVYYSK------SD------IPEKFHSNEWRTLNA 1404

Query: 462  RLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVA 521
              +      P  K  RCGFH +Y H+ E+ + T  Q +       +  H D  G    V 
Sbjct: 1405 SFNVYFGIKPV-KAARCGFHFLYAHDYEQNNLTMVQGS-------SSSHVDLGGHRSAVQ 1456

Query: 522  QASGSGSSQ 530
              +G+ S +
Sbjct: 1457 DTNGTHSQR 1465



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 19/143 (13%)

Query: 647  CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    +  P+I+Q +         GT I+E+  +I+ L GL  L L+ CKNL  LP 
Sbjct: 1143 CSQL----ESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPE 1198

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  L  L  L +     F++ P+       LL  HL    +  +   +  LSG  L +L
Sbjct: 1199 SICNLTSLKFLIVESCPSFKKLPDNLGRLQSLL--HLSVGPLDSMNFQLPSLSG--LCSL 1254

Query: 760  KDCK----NLKSLPSTINGLRSL 778
            +  +    N++ +PS I  L SL
Sbjct: 1255 RQLELQACNIREIPSEICYLSSL 1277


>gi|15230522|ref|NP_190724.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572077|emb|CAB63020.1| disease resistance-like protein [Arabidopsis thaliana]
 gi|332645285|gb|AEE78806.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1253

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 164/338 (48%), Gaps = 48/338 (14%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            K+L  LYL GT+I E+PS + L + L +L L+ CK L  LP+ I +L  L  L LSGCS+
Sbjct: 735  KNLRKLYLGGTAIKELPSLMHL-SELVVLDLENCKRLHKLPMGIGNLSSLAVLNLSGCSE 793

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L+    I  ++E+L   YL GT+I EV S I+ L  L +L L  CK L  LP  I+ LKS
Sbjct: 794  LEDIQGIPRNLEEL---YLAGTAIQEVTSLIKHLSELVVLDLQNCKRLQHLPMEISNLKS 850

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L TL L+                     D SG +IR  ++SI           +G +E  
Sbjct: 851  LVTLKLT---------------------DPSGMSIREVSTSIIQ---------NGISEIG 880

Query: 185  ASASWHLHLPFN--------LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
             S   +L L FN         L +   P + +   +    +L  L L +  L    IP +
Sbjct: 881  ISNLNYLLLTFNENAEQRREYLPRPRLPSSSLHGLVPRFYALVSLSLFNASL--MHIPEE 938

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            I +L S+  L L RN F  +P SI  L  L  L L  C+ L  LP +P +L+ +  +GC 
Sbjct: 939  ICSLPSVVLLDLGRNGFSKIPESIKQLSKLHSLRLRHCRNLILLPALPQSLKLLNVHGCV 998

Query: 297  SLVTLFGALKLCRSKYTIINCID-SLKLLRK---NGLA 330
            SL ++    +   S YT  +C + S K+ RK    GLA
Sbjct: 999  SLESVSWGFEQFPSHYTFSDCFNKSPKVARKRVVKGLA 1036



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 124/288 (43%), Gaps = 54/288 (18%)

Query: 24  IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
           +++   +E++ L+GC  L     T    + LR + LSGC K+K FP++  ++E+   LYL
Sbjct: 611 LQIALNMEVIDLQGCARLQRFLAT-GHFQHLRVINLSGCIKIKSFPEVPPNIEE---LYL 666

Query: 84  DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING--------LKSLKTLNLSGCCK 135
             T I  +P+          +Y ++    +    S +         L +LK L+LS C +
Sbjct: 667 KQTGIRSIPTVTFSPQDNSFIYDHKDHKFLNREVSSDSQSLSIMVYLDNLKVLDLSQCLE 726

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LE               D+ G           + KNLR LY  G       +  HL    
Sbjct: 727 LE---------------DIQG-----------IPKNLRKLYLGGTAIKELPSLMHLS-EL 759

Query: 196 NLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNL-HSLKELYLNRNNF 253
            +L   +C     LP   G + SL  L+LS C   E     DI  +  +L+ELYL     
Sbjct: 760 VVLDLENCKRLHKLPMGIGNLSSLAVLNLSGCSELE-----DIQGIPRNLEELYLAGTAI 814

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
             + + I  L  L  L+L++CKRLQ LP    NL+        SLVTL
Sbjct: 815 QEVTSLIKHLSELVVLDLQNCKRLQHLPMEISNLK--------SLVTL 854



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 8/147 (5%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I+EL  ++  L  LV L L  CK L +LP  I  L  L+ LNLSG S   E  +I  
Sbjct: 744 GTAIKELP-SLMHLSELVVLDLENCKRLHKLPMGIGNLSSLAVLNLSGCS---ELEDIQG 799

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRS---LRMMYP 783
               L E++L GTAI+ + + I+ LS  ++ +L++CK L+ LP  I+ L+S   L++  P
Sbjct: 800 IPRNLEELYLAGTAIQEVTSLIKHLSELVVLDLQNCKRLQHLPMEISNLKSLVTLKLTDP 859

Query: 784 SGCSKLKNVTETLGKVESLEVRLSSWN 810
           SG S ++ V+ ++ +    E+ +S+ N
Sbjct: 860 SGMS-IREVSTSIIQNGISEIGISNLN 885



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
           +++S + YL  L +  LS+  E  +I      L +++L GTAI+ LP S+  LS  ++ +
Sbjct: 705 QSLSIMVYLDNLKVLDLSQCLELEDIQGIPKNLRKLYLGGTAIKELP-SLMHLSELVVLD 763

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L++CK L  LP  I  L SL ++  SGCS+L+++      +E L
Sbjct: 764 LENCKRLHKLPMGIGNLSSLAVLNLSGCSELEDIQGIPRNLEEL 807



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 12/102 (11%)

Query: 649 RLWEEADEFPDIVQVL----SDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           RLWE   E   + +++         I+EL +A+ +      + L GC  L+R   T    
Sbjct: 583 RLWEGTKELGMLKRIMLCHSQQLVGIQELQIALNMEV----IDLQGCARLQRFLAT-GHF 637

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA 746
           ++L  +NLSG  K + FPE+  + +   E++L+ T IR +P 
Sbjct: 638 QHLRVINLSGCIKIKSFPEVPPNIE---ELYLKQTGIRSIPT 676


>gi|359477821|ref|XP_003632029.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1510

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 199/465 (42%), Gaps = 109/465 (23%)

Query: 98   LPGLELLYL-----NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
            +P LE+L L     + C NL  LP +I  LK L+ L+ +GC KLE  P+  G +  L  L
Sbjct: 634  VPNLEILILIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVL 693

Query: 153  DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH-LPFNLLGKSSCPVALMLPS 211
            D+SGTAI    SSI  +  L++L    C++        LH +P ++   SS  V      
Sbjct: 694  DLSGTAIMDLPSSITHLNGLQTLLLQECSK--------LHKIPIHICHLSSLEV------ 739

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
                     LDL  C + E  IPSDI +L SL++L L R +F ++P +I+ L +LE L L
Sbjct: 740  ---------LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNL 790

Query: 272  EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAI 331
              C  L+ + ++P  L+ + A+G +   +    L L    ++++NC    +  +      
Sbjct: 791  SHCNNLEQITELPSCLRLLDAHGSNRTSSRAPFLPL----HSLVNCFRWAQDWKHTSFRD 846

Query: 332  SMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
            S           S  G    IV PGS  IP+W + + +  S  +  P   +  N+ +GFA
Sbjct: 847  S-----------SYHGKGTCIVLPGSDGIPEWILNRGDNFSSVIELPQNWHQNNEFLGFA 895

Query: 391  ICCVF--------QVPK-----------------HSTGTY--------LFHSYPAHE--- 414
            ICCV+         +P+                  ST ++        +  S+  +E   
Sbjct: 896  ICCVYVPLSDESEDIPEKESAHGPENESDNKSEDESTHSWENERDDKSVAESFHKNEHKH 955

Query: 415  -----LECSMDGSGEGHYIYF----------------RGKFGHVVSDHLWLL-----FLP 448
                 LEC +   G+     F                +G+    VS   W++      +P
Sbjct: 956  THSCRLECFLGALGDSFDFQFVDRPGFQSTCFCYKEDKGEDNESVSGQTWVVCYSKAAIP 1015

Query: 449  RHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDE 493
               H++Q    L R  F   S+   KVK CG   IY  ++++  E
Sbjct: 1016 EMFHSYQLTDILAR--FHIYSEKALKVKECGVRLIYSQDLQQSHE 1058



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 126/250 (50%), Gaps = 50/250 (20%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G+ + EVP     L  L+ L L+ CKNL+SLP +I   K L TL  SGCS+L+  P+I+ 
Sbjct: 1082 GSDMNEVPIIGNPLE-LDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQ 1140

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             ME L KL L GT+I E+PSSI+ L GL+ L L+ CKNLV LP SI  L SLK L +  C
Sbjct: 1141 DMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESC 1200

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
               + +PD LG+++SL  L V       P  S+                           
Sbjct: 1201 PSFKKLPDNLGRLQSLLHLSVG------PLDSM--------------------------- 1227

Query: 194  PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                           LPSL+G+CSL +L+L  C + E  IPS+I  L SL   +  R + 
Sbjct: 1228 ------------NFQLPSLSGLCSLRQLELQACNIRE--IPSEICYLSSLGREF--RRSV 1271

Query: 254  VTLPASISGL 263
             T  A  +G+
Sbjct: 1272 RTFFAESNGI 1281



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 1/149 (0%)

Query: 34  TLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPS 93
           T+ GC NL  LP  I  LK L+ L  +GCSKL++FP+I  +M  L  L L GT+I ++PS
Sbjct: 646 TMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPS 705

Query: 94  SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEEL 152
           SI  L GL+ L L EC  L ++P  I  L SL+ L+L  C  +E  +P  +  + SL++L
Sbjct: 706 SITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKL 765

Query: 153 DVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           ++         ++I  + +L  L  S CN
Sbjct: 766 NLERGHFSSIPTTINQLSSLEVLNLSHCN 794



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 667  GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            G+D+ E+ +    L  L  L L  CKNL  LP +I   K L+TL+ SG S+    PEI  
Sbjct: 1082 GSDMNEVPIIGNPL-ELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEILQ 1140

Query: 727  SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              + L ++ L GTAI+ +P+SI+ L G     L +CKNL +LP +I  L SL+ +    C
Sbjct: 1141 DMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESC 1200

Query: 787  SKLKNVTETLGKVESL 802
               K + + LG+++SL
Sbjct: 1201 PSFKKLPDNLGRLQSL 1216



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 62/108 (57%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+  T++GC NLE LPR I  LK+L  L+ +G SK   FPEI  +  +L  + L GTAI 
Sbjct: 642 LIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIM 701

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            LP+SI  L+G     L++C  L  +P  I  L SL ++    C+ ++
Sbjct: 702 DLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGHCNIME 749



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 685 GNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHKIPIHICHLSSLEVLDLGH 744

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL---VRLPS 117
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL     LPS
Sbjct: 745 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSSLEVLNLSHCNNLEQITELPS 804

Query: 118 SINGLKS 124
            +  L +
Sbjct: 805 CLRLLDA 811



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 30/171 (17%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L L GT+I E+PSSI+ L GL+ L L  CKNL +LP +I +L  L+ L + 
Sbjct: 1139 LQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVE 1198

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             C   KK P  +  ++ L  L     S+  + S    LP                  S++
Sbjct: 1199 SCPSFKKLPDNLGRLQSLLHL-----SVGPLDSMNFQLP------------------SLS 1235

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
            GL SL+ L L   C +  +P  +  + SL      G   RR   + F   N
Sbjct: 1236 GLCSLRQLELQA-CNIREIPSEICYLSSL------GREFRRSVRTFFAESN 1279



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 147/369 (39%), Gaps = 63/369 (17%)

Query: 203  CPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
            C     LPS + G  SL  L  S C   E+ IP  + ++ SL++L L+      +P+SI 
Sbjct: 1105 CKNLTSLPSSIFGFKSLATLSCSGCSQLES-IPEILQDMESLRKLSLSGTAIKEIPSSIQ 1163

Query: 262  GLLNLEELELEDCKRLQSLPQIPPNL---QFVRANGCSSLVTLFGALKLCRSKYTI-INC 317
             L  L+ L L +CK L +LP+   NL   +F+    C S   L   L   +S   + +  
Sbjct: 1164 RLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGP 1223

Query: 318  IDSLKLLRKNGLAISMLREYLELQA------------VSDPGHKL-----SIVFPGSQIP 360
            +DS+     +   +  LR+ LELQA            +S  G +      +     + IP
Sbjct: 1224 LDSMNFQLPSLSGLCSLRQ-LELQACNIREIPSEICYLSSLGREFRRSVRTFFAESNGIP 1282

Query: 361  KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS----------- 409
            +W  +Q  G  IT+  P   Y  +  +GF +C ++   +  T T+   S           
Sbjct: 1283 EWISHQKSGFKITMKLPWSWYENDDFLGFVLCSLYVPLEIETKTHRIFSCILNFGDDSDS 1342

Query: 410  ------YPAHELECSM--DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLI 461
                        EC    D S +G  +Y+        SD      +P   H+ ++ +   
Sbjct: 1343 FLFDDLRLEQICECCYYEDASNQGLLVYYSK------SD------IPEKFHSNEWRTLNA 1390

Query: 462  RLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVA 521
              +      P  K  RCGFH +Y H+ E+ + T  Q +       +  H D  G    V 
Sbjct: 1391 SFNVYFGIKPV-KAARCGFHFLYAHDYEQNNLTMVQGS-------SSSHVDLGGHRSAVQ 1442

Query: 522  QASGSGSSQ 530
              +G+ S +
Sbjct: 1443 DTNGTHSQR 1451



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 19/143 (13%)

Query: 647  CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    +  P+I+Q +         GT I+E+  +I+ L GL  L L+ CKNL  LP 
Sbjct: 1129 CSQL----ESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPE 1184

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  L  L  L +     F++ P+       LL  HL    +  +   +  LSG  L +L
Sbjct: 1185 SICNLTSLKFLIVESCPSFKKLPDNLGRLQSLL--HLSVGPLDSMNFQLPSLSG--LCSL 1240

Query: 760  KDCK----NLKSLPSTINGLRSL 778
            +  +    N++ +PS I  L SL
Sbjct: 1241 RQLELQACNIREIPSEICYLSSL 1263


>gi|147771313|emb|CAN73963.1| hypothetical protein VITISV_034210 [Vitis vinifera]
          Length = 1384

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 122/219 (55%), Gaps = 20/219 (9%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + + E+P  IE    L+ L L+ C+NL SLP +I   K L+T   SGCS+L+ FP+I+  
Sbjct: 927  SDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILED 985

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ME L KL LDG++I E+PSSI+ L GL+ L L  C+NLV LP SI  L SLKTL ++ C 
Sbjct: 986  MEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCP 1045

Query: 135  KLENVPDTLGKVESLEEL---DVSGTAIRRPTSS----IFLMKNLRSLYFSGCNEPPASA 187
            +L+ +P+ LG+++SLE L   D      + P+ S    IF    LRSL       P   +
Sbjct: 1046 ELKKLPENLGRLQSLESLHVKDFDSMNCQLPSLSVLLEIFTTNQLRSL-------PDGIS 1098

Query: 188  SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
              H       L  S C +   +P+L    S+T +D   C
Sbjct: 1099 QLH---KLGFLDLSHCKLLQHIPALPS--SVTYVDAHQC 1132



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 190/406 (46%), Gaps = 61/406 (15%)

Query: 101  LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
            L+ L L +C+NL  LP+SI   K LKT + SGC +LE+ P+ L  +E LE+L++ G+AI+
Sbjct: 941  LDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIK 1000

Query: 161  RPTSSIFLMKNLRSLYFSGC----NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-V 215
               SSI  ++ L+ L  + C    N P +  +         L  +SCP    LP   G +
Sbjct: 1001 EIPSSIQRLRGLQDLNLAYCRNLVNLPESICNL---TSLKTLTITSCPELKKLPENLGRL 1057

Query: 216  CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             SL  L + D       +PS    L  L E++   N   +LP  IS L  L  L+L  CK
Sbjct: 1058 QSLESLHVKDFDSMNCQLPS----LSVLLEIFTT-NQLRSLPDGISQLHKLGFLDLSHCK 1112

Query: 276  RLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR 335
             LQ +P +P ++ +V A+ C+SL       K+  S             L  +    S ++
Sbjct: 1113 LLQHIPALPSSVTYVDAHQCTSL-------KISSS-------------LLWSPFFKSGIQ 1152

Query: 336  EYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
            E+++        +K+ I  P S  IP+W  +Q +GS IT+T P   Y  +  +GFA+C +
Sbjct: 1153 EFVQ-------RNKVGIFLPESNGIPEWISHQKKGSKITLTLPQNWYENDDFLGFALCSL 1205

Query: 395  FQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYI--------YFRGKFGHVVSDHLWLL- 445
              VP     T +     A    C ++      ++        Y         S+ LWL+ 
Sbjct: 1206 -HVPLDIEWTDI---KEARNFICKLNFDNSASFVVRNMQPQRYCESCRDGDESNQLWLIN 1261

Query: 446  ----FLPRHGHNWQFESNLIRLSFRS-ISDPTWKVKRCGFHPIYMH 486
                 +P+  H+ ++++  +  SF + +   + KV+RCGF  +Y +
Sbjct: 1262 YPKSIIPKRYHSNKYKT--LNASFENYLGTISVKVERCGFQLLYAY 1305



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 145/313 (46%), Gaps = 77/313 (24%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           + E+P     +P LE+L L  C+NL  LP  I   K L+TL+   C KL+  P+  G + 
Sbjct: 522 LTEIPD-FSSVPNLEILILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMR 580

Query: 148 SLEELDVSGTAIRR-PTSSIF-LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
            L ELD+SGTAI   P+SS F  +K L+ L F+ C++             N +    C +
Sbjct: 581 KLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSK------------LNKIPIDVCCL 628

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
           +          SL  LDLS C + E  IPSDI  L SLKEL L  N+F ++PA+I+ L  
Sbjct: 629 S----------SLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSR 678

Query: 266 LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
           L+ L L  C+ L+ +P++P +L+ + A+G +  ++    L      ++++NC +S     
Sbjct: 679 LQVLNLSHCQNLEHVPELPSSLRLLDAHGPNLTLSTASFLPF----HSLVNCFNS----- 729

Query: 326 KNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNK 385
                  + R   EL                                    P   Y  N+
Sbjct: 730 ------KIQRSETEL------------------------------------PQNCYQNNE 747

Query: 386 VVGFAICCVFQVP 398
            +GFAICCV+ VP
Sbjct: 748 FLGFAICCVY-VP 759



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 4/167 (2%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +TE+P     +  LE+L LKGC+NL  LP  I   K L+TL    CSKLK+FP+I  +M 
Sbjct: 522 LTEIPD-FSSVPNLEILILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMR 580

Query: 77  DLSKLYLDGTSIAEVP--SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            L +L L GT+I E+P  SS E L  L++L  N C  L ++P  +  L SL+ L+LS C 
Sbjct: 581 KLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYCN 640

Query: 135 KLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            +E  +P  + ++ SL+EL++     R   ++I  +  L+ L  S C
Sbjct: 641 IMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHC 687



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 1/136 (0%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            +D++EL + IE    L  L L  C+NL+ LP +I   K+L T + SG S+   FPEI   
Sbjct: 927  SDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEILED 985

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             + L ++ L+G+AI+ +P+SI+ L G    NL  C+NL +LP +I  L SL+ +  + C 
Sbjct: 986  MEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTITSCP 1045

Query: 788  KLKNVTETLGKVESLE 803
            +LK + E LG+++SLE
Sbjct: 1046 ELKKLPENLGRLQSLE 1061



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 84/141 (59%), Gaps = 6/141 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M+ L  L LDG++I E+PSSI+ L GL+ L L  C+NL +LP +I +L  L+TL ++
Sbjct: 983  LEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTIT 1042

Query: 61   GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C +LKK P+ +  ++ L  L++ D  S+     S+ +L  LE+   N+   L  LP  I
Sbjct: 1043 SCPELKKLPENLGRLQSLESLHVKDFDSMNCQLPSLSVL--LEIFTTNQ---LRSLPDGI 1097

Query: 120  NGLKSLKTLNLSGCCKLENVP 140
            + L  L  L+LS C  L+++P
Sbjct: 1098 SQLHKLGFLDLSHCKLLQHIP 1118



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 13/156 (8%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GC+NLE LPR I   K+L TL+    SK + FPEI  +  +L E+ L GTAI  LP
Sbjct: 537 LILKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELP 596

Query: 746 --ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             +S E L    + +   C  L  +P  +  L SL ++  S C    N+ E  G + S  
Sbjct: 597 SSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDLSYC----NIME--GGIPSDI 650

Query: 804 VRLSSWNRPKMQ-NDFDCVEQSAVETVTKLAKAELL 838
            RLSS     ++ NDF    +S   T+ +L++ ++L
Sbjct: 651 CRLSSLKELNLKSNDF----RSIPATINQLSRLQVL 682



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 2   ASMKDLSDLYLDGTSITEVPSS--IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +M+ L +L L GT+I E+PSS   E L  L++L+   C  L+ +P+ +  L  L  L+L
Sbjct: 577 GNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSLEVLDL 636

Query: 60  SGCSKLKK-FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C+ ++   P  +  +  L +L L       +P++I  L  L++L L+ C+NL  +P  
Sbjct: 637 SYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLEHVPEL 696

Query: 119 INGLKSL 125
            + L+ L
Sbjct: 697 PSSLRLL 703



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 15/153 (9%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    + FP+I++ +        DG+ I+E+  +I+ L GL  L L  C+NL  LP 
Sbjct: 973  CSQL----ESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPE 1028

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  L  L TL ++   + ++ PE       L  +H++         + +L S ++L  +
Sbjct: 1029 SICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHVKDFD----SMNCQLPSLSVLLEI 1084

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
                 L+SLP  I+ L  L  +  S C  L+++
Sbjct: 1085 FTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHI 1117



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 14/150 (9%)

Query: 645 GNCSRLWEEADEFPDIVQVLSD-------GTDIREL--SLAIELLFGLVQLTLNGCKNLE 695
           G CS+L      FP+I   +         GT I EL  S + E L  L  L+ N C  L 
Sbjct: 564 GECSKL----KRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSKLN 619

Query: 696 RLPRTISALKYLSTLNLSGLSKFRE-FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGN 754
           ++P  +  L  L  L+LS  +      P        L E++L+    R +PA+I  LS  
Sbjct: 620 KIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLSRL 679

Query: 755 ILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
            + NL  C+NL+ +P   + LR L    P+
Sbjct: 680 QVLNLSHCQNLEHVPELPSSLRLLDAHGPN 709


>gi|296089435|emb|CBI39254.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 187/443 (42%), Gaps = 104/443 (23%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L +    GTSI EVP SI+ L GLE L L+ CK L +    I SL  L++L+L GCS
Sbjct: 1   MGKLREFNFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCS 60

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           KLK                        +PSSI+ L  L+ L L+ C+NLVRLP SI  L 
Sbjct: 61  KLKG-----------------------LPSSIKHLKALKNLDLSSCENLVRLPESICSLS 97

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           SL+TL L+GC K +  P   G + +L  L +  TAI+   SSI  +K L  L  S  +  
Sbjct: 98  SLETLFLNGCLKFKGFPGVKGHMNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSRSSIV 157

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTG-------------------------VCSL 218
               S         +    C     LP   G                         + SL
Sbjct: 158 SLPESICSLTSLKTINVDECSALHKLPEDLGELSRLEILSFSYIRCDLPLIKRDSRLSSL 217

Query: 219 TKLDLSDCGLGEA----------------------AIPSDIDNLHSLKELYLNRNNFVTL 256
             L L DC L +                        IP+DI  L SL+ L L+ N+F ++
Sbjct: 218 KTLILIDCNLKDGVVLDICHLLSLKELHLSSCNIRGIPNDIFCLSSLEILNLDGNHFSSI 277

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIIN 316
           PA IS L +L  L L  C +LQ +P++P +L+ +  +G S                    
Sbjct: 278 PAGISRLYHLTSLNLRHCNKLQQVPELPSSLRLLDVHGPS-------------------- 317

Query: 317 CIDSLKLLRKNGLAISMLREYLELQAVSD---PGHKLSIVFPGSQ-IPKWFMYQNEGSSI 372
                     +G + S +R        SD    G+ + IV PGS  IPKW   + +GS I
Sbjct: 318 ----------DGTSSSPIRRNWNGAYFSDSWYSGNGICIVIPGSSGIPKWIKNKRKGSEI 367

Query: 373 TVTRPSYLYNVNKVVGFAICCVF 395
            +  P   +  N  +GFA+ CV+
Sbjct: 368 EIGLPQNWHLNNDFLGFALYCVY 390



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 4/153 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + ++ L  +I+ L  L  L L+ C+NL RLP +I +L  L TL L+G  KF+ FP +   
Sbjct: 60  SKLKGLPSSIKHLKALKNLDLSSCENLVRLPESICSLSSLETLFLNGCLKFKGFPGVKGH 119

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L  + L+ TAI+ +P+SI  L      NL    ++ SLP +I  L SL+ +    CS
Sbjct: 120 MNNLRVLRLDSTAIKEIPSSITHLKALEYLNLSR-SSIVSLPESICSLTSLKTINVDECS 178

Query: 788 KLKNVTETLGKVESLEVRLSSWNR---PKMQND 817
            L  + E LG++  LE+   S+ R   P ++ D
Sbjct: 179 ALHKLPEDLGELSRLEILSFSYIRCDLPLIKRD 211



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%)

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           +L E +  GT+I  +P SI+ L+G     L+DCK L +    I  L SL+ +   GCSKL
Sbjct: 3   KLREFNFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSLKLKGCSKL 62

Query: 790 KNVTETLGKVESLE 803
           K +  ++  +++L+
Sbjct: 63  KGLPSSIKHLKALK 76


>gi|359496032|ref|XP_003635136.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1050

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 218/499 (43%), Gaps = 115/499 (23%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L G T++ +V  S+  L+ L LL ++ C NL  LP +I  L  LRT  LSGCSK
Sbjct: 617  NLEVLVLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLP-SIRWLVSLRTFILSGCSK 675

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L+K  ++   M  LSKL LDGT+I +                                  
Sbjct: 676  LEKLQEVPQHMPYLSKLCLDGTAITD---------------------------------- 701

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
                  SG  +L N  +  G ++ L EL+   + IR+  SS  +++N         N  P
Sbjct: 702  -----FSGWSELGNFQENSGNLDCLSELNSDDSTIRQQHSSSVVLRNH--------NASP 748

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
            +SA                        ++  C+LT                      SL 
Sbjct: 749  SSAPRRSRF------------------ISPHCTLT----------------------SLT 768

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL--- 301
             L L+  + + LP ++  L  L+ LEL +C+RLQ+LP +P +++ + A+ C+SL  +   
Sbjct: 769  YLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIECMNASNCTSLELISPQ 828

Query: 302  -----FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL--SIVF 354
                 FG   L  + + + NC   ++   ++  + ++   + +  A+  P   +  S VF
Sbjct: 829  SVFKRFGGF-LFGNCFKLRNCHSKMEHDVQSVASHAVPGTWRDTYAIWHPNVAIPFSTVF 887

Query: 355  PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY-LFHSYPAH 413
            PGS+IP WF + ++G  I +  P   Y  +  +GFA+  V   P+H +  + ++     H
Sbjct: 888  PGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAVM-APQHDSRAWCMYCDLDTH 946

Query: 414  ELECSMDGSGEGHYI-YFRGKFGH------VVSDHLWLLFLPRHGHNWQFESNLIRLSFR 466
            +L    + +   H I  F G + +      + SDH+WL ++P      + + + I+ SF 
Sbjct: 947  DL----NSNSNSHRICSFFGSWTYQLQRTPIESDHVWLAYVPSFFSFSREKWSHIKFSFS 1002

Query: 467  SISDPTWKVKRCGFHPIYM 485
            S       VK CGF P+Y+
Sbjct: 1003 SSGGCV--VKSCGFCPVYI 1019



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)

Query: 661 VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE 720
           V VL   T++R++  ++  L  L+ L +  C NLE LP +I  L  L T  LSG SK  +
Sbjct: 620 VLVLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLP-SIRWLVSLRTFILSGCSKLEK 678

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             E+      L ++ L+GTAI       EL  GN   N  +   L  L S  + +R
Sbjct: 679 LQEVPQHMPYLSKLCLDGTAITDFSGWSEL--GNFQENSGNLDCLSELNSDDSTIR 732



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++  L+ L L GTSI  +P ++E L+ L+ L L  C+ L +LPV  SS++C+     S C
Sbjct: 763 TLTSLTYLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIECMNA---SNC 819

Query: 63  SKLK 66
           + L+
Sbjct: 820 TSLE 823



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 5/105 (4%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI-HLEG-TAIRGLPASIEL 750
           +L +L +      +L  +++S     ++ P+   SR   LE+  L+G T +R +  S+  
Sbjct: 581 HLTQLWKGQKVFGHLEFVDVSYSQYLKKTPDF--SRATNLEVLVLKGCTNLRKVHPSLGY 638

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           LS  IL N+++C NL+ LPS I  L SLR    SGCSKL+ + E 
Sbjct: 639 LSKLILLNMENCINLEHLPS-IRWLVSLRTFILSGCSKLEKLQEV 682



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 65/141 (46%), Gaps = 10/141 (7%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTI----SSLKCLRTLE 58
           M  LS L LDGT+IT+     EL    E      C   L+S   TI    SS   LR   
Sbjct: 686 MPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLSELNSDDSTIRQQHSSSVVLRNHN 745

Query: 59  LSGCS--KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            S  S  +  +F     ++  L+ L L GTSI  +P ++E L  L+ L L  C+ L  LP
Sbjct: 746 ASPSSAPRRSRFISPHCTLTSLTYLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALP 805

Query: 117 SSINGLKSLKTLNLSGCCKLE 137
              +   S++ +N S C  LE
Sbjct: 806 VLPS---SIECMNASNCTSLE 823


>gi|358347701|ref|XP_003637894.1| Elongation factor Ts [Medicago truncatula]
 gi|355503829|gb|AES85032.1| Elongation factor Ts [Medicago truncatula]
          Length = 1319

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 222/502 (44%), Gaps = 76/502 (15%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G     +PSS      +EL+ ++ C  +  L      L  LR L+LS   KL+K      
Sbjct: 597  GYPFKYLPSSFHPAELVELILVRSC--IKQLWKNKKHLPNLRRLDLSDSKKLEKIEDF-G 653

Query: 74   SMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
               +L  L L+    + E+  SI LL  L  L L  C NLV +P++I GL SLK LN+SG
Sbjct: 654  QFPNLEWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSG 713

Query: 133  CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
            C KL   P    + ++  ++  S T+  R TSS+F +       F      P +AS+   
Sbjct: 714  CSKLMK-PGISSEKKNKHDIRES-TSHCRSTSSVFKL-----FIF------PNNASF--- 757

Query: 193  LPFNLLGKSSCPV--ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                     S PV     LP    +  L  +D+S C L  + +P  I+ LH L+ L L  
Sbjct: 758  ---------SAPVTHTYKLPCFRILYCLRNIDISFCHL--SHVPDAIECLHRLERLNLGG 806

Query: 251  NNFVTLPASISGLLNLEELELEDCKRLQSLPQIP------PNLQFVRANGCSSLVTLFGA 304
            NNFVTLP S+  L  L  L LE CK L+SLPQ+P      P+         +  + +F  
Sbjct: 807  NNFVTLP-SMRKLSRLVYLNLEHCKLLESLPQLPFPSTIGPDYHENNEYYWTKGLVIFNC 865

Query: 305  LKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL--QAVSDPGHKLSIVFPGSQIPKW 362
             KL   +     C  S        +  S ++++++   Q+     ++L IV PGS+IP W
Sbjct: 866  PKLGERE-----CCSS--------ITFSWMKQFIQANQQSYGPYLYELQIVTPGSEIPSW 912

Query: 363  FMYQNEGSSITVTRPSYLY-NVNKVVGFAICCVF-QVPKHSTGTYLFHSYPAHELECSMD 420
               Q+ G SI +     ++ N N ++GF  C VF   P+  T   +    P   L   M 
Sbjct: 913  INNQSMGGSILIDESPVIHDNKNNIIGFVFCAVFCMAPQDQT---MIECLP---LSVYMK 966

Query: 421  GSGEGHYIYFRGKFGHVV--------SDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPT 472
               E +      KF  ++        S HLWL++ PR  ++  F +  I  +        
Sbjct: 967  MGDERNC----RKFPVIIDRDLIPTKSSHLWLVYFPREYYD-VFGTIRIYCTRYGRQVVG 1021

Query: 473  WKVKRCGFHPIYMHEVEEFDET 494
              VK CG+  +    ++EF+ T
Sbjct: 1022 MDVKCCGYRWVCKQNLQEFNLT 1043



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIEL 750
           KN + LP  +  L    +  L  +  F +FP        L  ++LE    +  L  SI L
Sbjct: 627 KNKKHLP-NLRRLDLSDSKKLEKIEDFGQFP-------NLEWLNLERCIKLVELDPSIGL 678

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           L   +  NL+ C NL S+P+ I GL SL+ +  SGCSKL
Sbjct: 679 LRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKL 717


>gi|224109866|ref|XP_002333191.1| predicted protein [Populus trichocarpa]
 gi|222834646|gb|EEE73109.1| predicted protein [Populus trichocarpa]
          Length = 603

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 193/413 (46%), Gaps = 107/413 (25%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           +D  S+TEVP S++ L  LE L L  C NL S P+  S  K L+ L +S C  + K P I
Sbjct: 171 VDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDS--KVLKVLSISRCLDMTKCPTI 228

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             +M+ L   YL+ TSI EVP SI                             L+ L L 
Sbjct: 229 SQNMKSL---YLEETSIKEVPQSIT--------------------------SKLENLGLH 259

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
           GC K+   P+  G V++L    +SGTAI+   SSI  +  L  L  SGC           
Sbjct: 260 GCSKITKFPEISGDVKTLY---LSGTAIKEVPSSIQFLTRLEVLDMSGC----------- 305

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                                      +KL+     L E  +P  +++LHSLK   L++ 
Sbjct: 306 ---------------------------SKLE----SLPEITVP--MESLHSLK---LSKT 329

Query: 252 NFVTLPAS-ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRS 310
               +P+S I  +++L  L+L D   +++LP++PP+L+++  + C+SL T+  ++ + R 
Sbjct: 330 GIKEIPSSLIKHMISLRFLKL-DGTPIKALPELPPSLRYLTTHDCASLETVTSSINIGRL 388

Query: 311 KYTI--INCIDSLKLLRKNGLAISMLREYLELQAVSD-PGHKLSIVFPGSQIPKWFMYQN 367
           +  +   NC      L +  L  +M   +L++Q+  + P   + +V PGS+IP+WF  + 
Sbjct: 389 ELGLDFTNCFK----LDQKPLVAAM---HLKIQSGEEIPHGGIQMVLPGSEIPEWFGEKG 441

Query: 368 EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD 420
            GSS+T+  PS   N +++ G A C VF +P            P+H++   +D
Sbjct: 442 IGSSLTMQLPS---NCHQLKGIAFCLVFLLP-----------LPSHDMPYKVD 480



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 8/165 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  LYL GT+I EVPSSI+ LT LE+L + GC  L SLP     ++ L +L+LS  + +
Sbjct: 273 DVKTLYLSGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSK-TGI 331

Query: 66  KKFP-QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           K+ P  ++  M  L  L LDGT I  +P   EL P L  L  ++C +L  + SSIN  + 
Sbjct: 332 KEIPSSLIKHMISLRFLKLDGTPIKALP---ELPPSLRYLTTHDCASLETVTSSINIGRL 388

Query: 125 LKTLNLSGCCKLENVPDTLG---KVESLEELDVSGTAIRRPTSSI 166
              L+ + C KL+  P       K++S EE+   G  +  P S I
Sbjct: 389 ELGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPHGGIQMVLPGSEI 433



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 30/172 (17%)

Query: 656 EFPDIVQV-------LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           E PD+ +        L D   + E+  +++ L  L +L LN C NL   P   S  K L 
Sbjct: 155 ELPDLSKARNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDS--KVLK 212

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL------------------ 750
            L++S      + P I+ +   L   +LE T+I+ +P SI                    
Sbjct: 213 VLSISRCLDMTKCPTISQNMKSL---YLEETSIKEVPQSITSKLENLGLHGCSKITKFPE 269

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +SG++ +       +K +PS+I  L  L ++  SGCSKL+++ E    +ESL
Sbjct: 270 ISGDVKTLYLSGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESL 321



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 5/128 (3%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS++ +  +   D+  +   GT I+E+  +I+ L  L  L ++GC  LE LP     ++ 
Sbjct: 261 CSKITKFPEISGDVKTLYLSGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMES 320

Query: 707 LSTLNLSGLSKFREFP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
           L +L LS  +  +E P  +      L  + L+GT I+ LP   EL          DC +L
Sbjct: 321 LHSLKLSK-TGIKEIPSSLIKHMISLRFLKLDGTPIKALP---ELPPSLRYLTTHDCASL 376

Query: 766 KSLPSTIN 773
           +++ S+IN
Sbjct: 377 ETVTSSIN 384



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           +++ +P++I++   L  L L G SK  +FPEI+     L   +L GTAI+ +P+SI+ L+
Sbjct: 241 SIKEVPQSITS--KLENLGLHGCSKITKFPEISGDVKTL---YLSGTAIKEVPSSIQFLT 295

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLR 779
              + ++  C  L+SLP     + SL 
Sbjct: 296 RLEVLDMSGCSKLESLPEITVPMESLH 322



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 9/111 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI--ELL 751
           ++ +P +I  L  L  L++SG SK    PEIT   + L  + L  T I+ +P+S+   ++
Sbjct: 284 IKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSSLIKHMI 343

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET--LGKVE 800
           S   L    D   +K+LP       SLR +    C+ L+ VT +  +G++E
Sbjct: 344 SLRFLK--LDGTPIKALPELPP---SLRYLTTHDCASLETVTSSINIGRLE 389


>gi|227438249|gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1309

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 202/454 (44%), Gaps = 100/454 (22%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN-----------------------LSS 43
            L +L+LD T I E+P SI  L  L+ L+LK C++                       L S
Sbjct: 647  LKELFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTSLEELDLSSTSLQS 706

Query: 44   LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
            LP +I  LK L+ L L  C+ L K P  +  ++ L KL++ G+++ E+P  +  LP L  
Sbjct: 707  LPSSIGDLKNLQKLSLMHCASLSKIPDTIKELKSLKKLFIYGSAVEELPLCLGSLPCLTD 766

Query: 104  LYLNECKNLVRLPSSINGLKSL-----------------------KTLNLSGCCKLENVP 140
                ECK L  +PSSI GL SL                       + L L  C  L+ +P
Sbjct: 767  FSAGECKLLKHVPSSIGGLNSLLELELDWTPIETLPAEIGDLHFIQKLGLRNCKSLKALP 826

Query: 141  DTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN---EPPAS----ASWH--- 190
            +++G +++L  L ++G  I +   +   ++NL +L    C      P S     S H   
Sbjct: 827  ESIGNMDTLHSLFLTGANIEKLPETFGKLENLDTLRMDNCKMIKRLPESFGDLKSLHDLY 886

Query: 191  ------LHLP--FNLL------------------GKSSCPVALMLP-SLTGVCSLTKLDL 223
                  + LP  F  L                  G S  P  + +P S + + SL ++D 
Sbjct: 887  MKETSVVELPESFGNLSNLRVLKILKKPLFRSSPGTSEEPSFVEVPNSFSNLLSLEEIDA 946

Query: 224  SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
               G+    +P D+  L SLK+L L  N F +LP+S+ GL NL+   L DC+ L+ LP +
Sbjct: 947  KGWGIW-GKVPDDLGKLSSLKKLELGNNYFHSLPSSLEGLWNLKLFTLYDCQELKCLPPL 1005

Query: 284  PPNLQFVRANGCSSLVTLFGALKL-CRSKYTIINC--------IDSLKLLRKNGLAISML 334
            P  L+ +    C +L ++    KL    +  + NC        ++ LK L++  L +S  
Sbjct: 1006 PWKLEKLNLANCFALESIADLSKLEILEELNLTNCGKVDDVPGLEHLKALKR--LYMSGC 1063

Query: 335  REYLEL---QAVSDPGHKL--SIVFPGSQIPKWF 363
               L +   + +S    K+  ++  PG++IP WF
Sbjct: 1064 NSRLSVAVKKRLSKASLKMMRNLSLPGNRIPDWF 1097



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 149/296 (50%), Gaps = 31/296 (10%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + EVPSS+  L  L  L L+ C NL+   V +S LK L  L LSGCS L   P+ +  M 
Sbjct: 586 LVEVPSSVGNLRTLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGLMP 645

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L +L+LD T I E+P SI  L  L+ L L  C+++  LP  I  L SL+ L+LS    L
Sbjct: 646 CLKELFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTSLEELDLSSTS-L 704

Query: 137 ENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           +++P ++G +++L++L +   A + +   +I  +K+L+ L+  G      SA   L L  
Sbjct: 705 QSLPSSIGDLKNLQKLSLMHCASLSKIPDTIKELKSLKKLFIYG------SAVEELPL-- 756

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
             LG   C              LT     +C L +  +PS I  L+SL EL L+     T
Sbjct: 757 -CLGSLPC--------------LTDFSAGECKLLK-HVPSSIGGLNSLLELELDWTPIET 800

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALK 306
           LPA I  L  +++L L +CK L++LP+   N+      F+       L   FG L+
Sbjct: 801 LPAEIGDLHFIQKLGLRNCKSLKALPESIGNMDTLHSLFLTGANIEKLPETFGKLE 856



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 19/276 (6%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++TE    +  L  LE L L GC +LS LP  I  + CL+ L L   + +K+ P  +  +
Sbjct: 609 NLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGLMPCLKELFLDA-TGIKELPDSIFRL 667

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           E+L KL L    SI E+P  I  L  LE L L+   +L  LPSSI  LK+L+ L+L  C 
Sbjct: 668 ENLQKLSLKSCRSIQELPMCIGTLTSLEELDLSST-SLQSLPSSIGDLKNLQKLSLMHCA 726

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L  +PDT+ +++SL++L + G+A+      +  +  L       C           H+P
Sbjct: 727 SLSKIPDTIKELKSLKKLFIYGSAVEELPLCLGSLPCLTDFSAGECK-------LLKHVP 779

Query: 195 FNLLGKSS--------CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
            ++ G +S         P+  +   +  +  + KL L +C     A+P  I N+ +L  L
Sbjct: 780 SSIGGLNSLLELELDWTPIETLPAEIGDLHFIQKLGLRNCK-SLKALPESIGNMDTLHSL 838

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +L   N   LP +   L NL+ L +++CK ++ LP+
Sbjct: 839 FLTGANIEKLPETFGKLENLDTLRMDNCKMIKRLPE 874



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 30/208 (14%)

Query: 101 LELLYLNECKNLVRLPSS------------------------INGLKSLKTLNLSGCCKL 136
           LE L    C  LV +PSS                        ++GLKSL+ L LSGC  L
Sbjct: 575 LEKLVFERCMRLVEVPSSVGNLRTLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSL 634

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHL 193
             +P+ +G +  L+EL +  T I+    SIF ++NL+ L    C    E P        L
Sbjct: 635 SVLPENIGLMPCLKELFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTSL 694

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
               L  SS  +  +  S+  + +L KL L  C    + IP  I  L SLK+L++  +  
Sbjct: 695 --EELDLSSTSLQSLPSSIGDLKNLQKLSLMHCA-SLSKIPDTIKELKSLKKLFIYGSAV 751

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLP 281
             LP  +  L  L +    +CK L+ +P
Sbjct: 752 EELPLCLGSLPCLTDFSAGECKLLKHVP 779



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 24/159 (15%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG------------- 714
           T ++ L  +I  L  L +L+L  C +L ++P TI  LK L  L + G             
Sbjct: 702 TSLQSLPSSIGDLKNLQKLSLMHCASLSKIPDTIKELKSLKKLFIYGSAVEELPLCLGSL 761

Query: 715 --LSKF--------REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
             L+ F        +  P      + LLE+ L+ T I  LPA I  L       L++CK+
Sbjct: 762 PCLTDFSAGECKLLKHVPSSIGGLNSLLELELDWTPIETLPAEIGDLHFIQKLGLRNCKS 821

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LK+LP +I  + +L  ++ +G + ++ + ET GK+E+L+
Sbjct: 822 LKALPESIGNMDTLHSLFLTGAN-IEKLPETFGKLENLD 859



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L  C NL      +S LK L  L LSG S     PE       L E+ L+ T I+
Sbjct: 599 LLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGLMPCLKELFLDATGIK 658

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +LK C++++ LP  I  L SL  +  S  S L+++  ++G +++L
Sbjct: 659 ELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTSLEELDLSSTS-LQSLPSSIGDLKNL 717

Query: 803 E 803
           +
Sbjct: 718 Q 718



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 8/169 (4%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I  L ++  L L      +  PE   + D L  + L G  I  LP +   L  
Sbjct: 798 IETLPAEIGDLHFIQKLGLRNCKSLKALPESIGNMDTLHSLFLTGANIEKLPETFGKLEN 857

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPK 813
                + +CK +K LP +   L+SL  +Y    S ++ + E+ G + +L V L    +P 
Sbjct: 858 LDTLRMDNCKMIKRLPESFGDLKSLHDLYMKETSVVE-LPESFGNLSNLRV-LKILKKPL 915

Query: 814 MQNDFDCVEQ-SAVETVTKLAKAELLRDSDS-----WKKNVDKCMKLST 856
            ++     E+ S VE     +    L + D+     W K  D   KLS+
Sbjct: 916 FRSSPGTSEEPSFVEVPNSFSNLLSLEEIDAKGWGIWGKVPDDLGKLSS 964



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 24/131 (18%)

Query: 657 FPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P + ++  D T I+EL  +I  L  L +L+L  C++++ LP  I  L  L  L+LS   
Sbjct: 644 MPCLKELFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTSLEELDLS--- 700

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
                                 T+++ LP+SI  L      +L  C +L  +P TI  L+
Sbjct: 701 ---------------------STSLQSLPSSIGDLKNLQKLSLMHCASLSKIPDTIKELK 739

Query: 777 SLRMMYPSGCS 787
           SL+ ++  G +
Sbjct: 740 SLKKLFIYGSA 750



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 47/252 (18%)

Query: 101 LELLYLNECK---NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L LL +N  +   NL RLPS       LK +   GC  L+ VP  L     L  LD++ +
Sbjct: 484 LRLLQINHVELAGNLERLPSE------LKWIQWRGC-PLKEVPLNL-LARQLAVLDLAES 535

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AIRR          ++SL+  G +        +L +  NL G   C     +P L+    
Sbjct: 536 AIRR----------IQSLHIEGVD-------GNLKV-VNLRG---CHSLEAVPDLSNHKF 574

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKR 276
           L KL    C +    +PS + NL +L  L L N  N       +SGL +LE+L L  C  
Sbjct: 575 LEKLVFERC-MRLVEVPSSVGNLRTLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSS 633

Query: 277 LQSLPQ---IPPNLQ--FVRANGCSSLV-TLFG-------ALKLCRSKYTIINCIDSLKL 323
           L  LP+   + P L+  F+ A G   L  ++F        +LK CRS   +  CI +L  
Sbjct: 634 LSVLPENIGLMPCLKELFLDATGIKELPDSIFRLENLQKLSLKSCRSIQELPMCIGTLTS 693

Query: 324 LRKNGLAISMLR 335
           L +  L+ + L+
Sbjct: 694 LEELDLSSTSLQ 705


>gi|357500581|ref|XP_003620579.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495594|gb|AES76797.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1594

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 222/502 (44%), Gaps = 76/502 (15%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G     +PSS      +EL+ ++ C  +  L      L  LR L+LS   KL+K      
Sbjct: 597  GYPFKYLPSSFHPAELVELILVRSC--IKQLWKNKKHLPNLRRLDLSDSKKLEKIEDF-G 653

Query: 74   SMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
               +L  L L+    + E+  SI LL  L  L L  C NLV +P++I GL SLK LN+SG
Sbjct: 654  QFPNLEWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSG 713

Query: 133  CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
            C KL   P    + ++  ++  S T+  R TSS+F +       F      P +AS+   
Sbjct: 714  CSKLMK-PGISSEKKNKHDIRES-TSHCRSTSSVFKL-----FIF------PNNASF--- 757

Query: 193  LPFNLLGKSSCPV--ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                     S PV     LP    +  L  +D+S C L  + +P  I+ LH L+ L L  
Sbjct: 758  ---------SAPVTHTYKLPCFRILYCLRNIDISFCHL--SHVPDAIECLHRLERLNLGG 806

Query: 251  NNFVTLPASISGLLNLEELELEDCKRLQSLPQIP------PNLQFVRANGCSSLVTLFGA 304
            NNFVTLP S+  L  L  L LE CK L+SLPQ+P      P+         +  + +F  
Sbjct: 807  NNFVTLP-SMRKLSRLVYLNLEHCKLLESLPQLPFPSTIGPDYHENNEYYWTKGLVIFNC 865

Query: 305  LKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL--QAVSDPGHKLSIVFPGSQIPKW 362
             KL   +     C  S        +  S ++++++   Q+     ++L IV PGS+IP W
Sbjct: 866  PKLGERE-----CCSS--------ITFSWMKQFIQANQQSYGPYLYELQIVTPGSEIPSW 912

Query: 363  FMYQNEGSSITVTRPSYLY-NVNKVVGFAICCVF-QVPKHSTGTYLFHSYPAHELECSMD 420
               Q+ G SI +     ++ N N ++GF  C VF   P+  T   +    P   L   M 
Sbjct: 913  INNQSMGGSILIDESPVIHDNKNNIIGFVFCAVFCMAPQDQT---MIECLP---LSVYMK 966

Query: 421  GSGEGHYIYFRGKFGHVV--------SDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPT 472
               E +      KF  ++        S HLWL++ PR  ++  F +  I  +        
Sbjct: 967  MGDERNC----RKFPVIIDRDLIPTKSSHLWLVYFPREYYD-VFGTIRIYCTRYGRQVVG 1021

Query: 473  WKVKRCGFHPIYMHEVEEFDET 494
              VK CG+  +    ++EF+ T
Sbjct: 1022 MDVKCCGYRWVCKQNLQEFNLT 1043



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIEL 750
           KN + LP  +  L    +  L  +  F +FP        L  ++LE    +  L  SI L
Sbjct: 627 KNKKHLP-NLRRLDLSDSKKLEKIEDFGQFP-------NLEWLNLERCIKLVELDPSIGL 678

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           L   +  NL+ C NL S+P+ I GL SL+ +  SGCSKL
Sbjct: 679 LRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKL 717


>gi|296086817|emb|CBI32966.3| unnamed protein product [Vitis vinifera]
          Length = 1313

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 220/528 (41%), Gaps = 104/528 (19%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--------------------- 40
             +MK L  LYL  T+I ++P+SI  L  L  L L  C                       
Sbjct: 748  GNMKSLGMLYLTNTAIKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGMLYLTN 807

Query: 41   --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
              +  LP +I SL+ L  L+LS CSK +KFP+   +M+ L  L L  T+I +        
Sbjct: 808  TAIKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKD-------- 859

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
                            LP SI  L+SL  L+LS C K E  P+  G ++ L  L ++ TA
Sbjct: 860  ----------------LPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKRLGVLYLTNTA 903

Query: 159  IRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
            I+    SI  + +L  L  S C++    P    S    L    L      +  +  S+  
Sbjct: 904  IKDLPDSIGSL-DLVDLDLSNCSQFEKFPELKRS---MLELRTLNLRRTAIKELPSSIDN 959

Query: 215  VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
            V  L  LD+S+C     ++P DI  L  L+ L L   + +      + L NL +L     
Sbjct: 960  VSGLWDLDISECK-NLRSLPDDISRLEFLESLILGGCSNLWEGLISNQLRNLGKLNTSQW 1018

Query: 275  KRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISML 334
            K  +   ++P +L+ + A+ C+S   L   L LC      +N + S         A   L
Sbjct: 1019 KMAEKTLELPSSLERIDAHHCTSKEDLSSLLWLCH-----LNWLKS---------ATEEL 1064

Query: 335  REYLELQAVSDPGHKLSIVFP-GSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICC 393
            + +           KLS V P  S IP+W  Y N GS +T   P+  Y    ++GF + C
Sbjct: 1065 KCW-----------KLSAVIPESSGIPEWIRYDNLGSELTTELPTNWYEDPDLLGFVVSC 1113

Query: 394  VFQ-VPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFR--------GKFGHVVSDHLWL 444
            V+Q +P        +H   A   E ++ G+G G     R        G F  ++ D +W+
Sbjct: 1114 VYQPIPTSHDPRISYHFSSAFSCELNLHGNGFGFKDERRFGCRCECQGNFNDMI-DQVWV 1172

Query: 445  LFLPR------HGHNWQFESNLIRLSFRSISD--PTWKVKRCGFHPIY 484
             + P+      H HN    S  I  SF+S +       VK+CG + I+
Sbjct: 1173 WWYPKTAIPKEHLHN----STHINASFKSNTYYCDAVNVKKCGINLIF 1216



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 161/337 (47%), Gaps = 55/337 (16%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN--------------------- 40
            +M+ L  LYL  T+I E+P SI+L   +E L L  C                       
Sbjct: 561 GNMRSLRLLYLSKTAIKELPGSIDL-ESVESLDLSYCSKFKKFPENGANMKSLRELDLTH 619

Query: 41  --LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
             +  LP+ IS+ + LRTL+LS CSK +KFP I  +M +L +L L+ T+I   P SI  L
Sbjct: 620 TAIKELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNLKELLLNNTAIKCFPDSIGYL 679

Query: 99  PGLELLYLNEC-------------KNLVR----------LPSSINGLKSLKTLNLSGCCK 135
             LE+L +++C             KNL +          LP  I  L+SL+ L+LS C K
Sbjct: 680 KSLEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSK 739

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHL 191
            E  P+  G ++SL  L ++ TAI+   +SI  +++L  L  S C++    P    +   
Sbjct: 740 FEKFPEKGGNMKSLGMLYLTNTAIKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMK- 798

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                +L  ++  +  +  S+  + SL +LDLS+C   E   P    N+ SL  L L   
Sbjct: 799 --SLGMLYLTNTAIKDLPDSIGSLESLVELDLSNCSKFE-KFPEKGGNMKSLVVLRLMNT 855

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
               LP SI  L +L EL+L +C + +  P+   N++
Sbjct: 856 AIKDLPDSIGSLESLVELDLSNCSKFEKFPEKGGNMK 892



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 28/269 (10%)

Query: 45  PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL--LPGLE 102
           P +I + +    L+  G S L+KFP I  +M  L  LYL  T+I E+P SI+L  +  L+
Sbjct: 533 PTSIENSRSFWDLDPCGHSNLEKFPGIQGNMRSLRLLYLSKTAIKELPGSIDLESVESLD 592

Query: 103 LLYLNECKN--------------------LVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
           L Y ++ K                     +  LP  I+  +SL+TL+LS C K E  P  
Sbjct: 593 LSYCSKFKKFPENGANMKSLRELDLTHTAIKELPIGISNWESLRTLDLSKCSKFEKFPAI 652

Query: 143 LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE---PPASASWHLHLPFNLLG 199
            G + +L+EL ++ TAI+    SI  +K+L  L  S C++    P       +L   LL 
Sbjct: 653 QGNMRNLKELLLNNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLLL- 711

Query: 200 KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
             + P+  +   +  + SL  LDLSDC   E   P    N+ SL  LYL       LP S
Sbjct: 712 -KNTPIKDLPDGIGELESLEILDLSDCSKFE-KFPEKGGNMKSLGMLYLTNTAIKDLPNS 769

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           I  L +L EL+L +C + +  P+   N++
Sbjct: 770 IGSLESLVELDLSNCSKFEKFPEKGGNMK 798



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 145/318 (45%), Gaps = 38/318 (11%)

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI-----------------ELLPG-- 100
           S CS+  KF +I  +M    + YL   +I E P+SI                 E  PG  
Sbjct: 501 SKCSRFGKFSEIQGNMRCPWEPYLKEIAIKEHPTSIENSRSFWDLDPCGHSNLEKFPGIQ 560

Query: 101 -----LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
                L LLYL++   +  LP SI+ L+S+++L+LS C K +  P+    ++SL ELD++
Sbjct: 561 GNMRSLRLLYLSKTA-IKELPGSID-LESVESLDLSYCSKFKKFPENGANMKSLRELDLT 618

Query: 156 GTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSL 212
            TAI+     I   ++LR+L  S C+   + PA      +L   LL  ++  +     S+
Sbjct: 619 HTAIKELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNLKELLLNNTA--IKCFPDSI 676

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
             + SL  L++SDC   E   P    N+ +LK+L L       LP  I  L +LE L+L 
Sbjct: 677 GYLKSLEILNVSDCSKFE-NFPEKGGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLS 735

Query: 273 DCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN 327
           DC + +  P+   N++     ++       L    G+L+    +  + NC    K   K 
Sbjct: 736 DCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPNSIGSLE-SLVELDLSNCSKFEKFPEKG 794

Query: 328 GLAISMLREYLELQAVSD 345
           G   S+   YL   A+ D
Sbjct: 795 GNMKSLGMLYLTNTAIKD 812



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 30/192 (15%)

Query: 646  NCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
            NCS+     E+      +V +    T I++L  +I  L  LV+L L+ C   E+ P    
Sbjct: 830  NCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDLSNCSKFEKFPEKGG 889

Query: 703  ALKYLSTL----------------------NLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
             +K L  L                      +LS  S+F +FPE+  S  +L  ++L  TA
Sbjct: 890  NMKRLGVLYLTNTAIKDLPDSIGSLDLVDLDLSNCSQFEKFPELKRSMLELRTLNLRRTA 949

Query: 741  IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL-----KNVTET 795
            I+ LP+SI+ +SG    ++ +CKNL+SLP  I+ L  L  +   GCS L      N    
Sbjct: 950  IKELPSSIDNVSGLWDLDISECKNLRSLPDDISRLEFLESLILGGCSNLWEGLISNQLRN 1009

Query: 796  LGKVESLEVRLS 807
            LGK+ + + +++
Sbjct: 1010 LGKLNTSQWKMA 1021



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 45/262 (17%)

Query: 582 FDDMPTKERAS-HLMCCINSMVSQAKAISQQGQFVKMISVDSGCMSC-YKKWGRQTVRRQ 639
           +D+M  +E    +    I+S    A   S+ G+F ++     G M C ++ + ++   ++
Sbjct: 476 YDEMKEEEEVDPYYEKIIDSAKKTASKCSRFGKFSEI----QGNMRCPWEPYLKEIAIKE 531

Query: 640 SPQEPGNCSRLWE-------EADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQ 685
            P    N    W+         ++FP I   +          T I+EL  +I+L   +  
Sbjct: 532 HPTSIENSRSFWDLDPCGHSNLEKFPGIQGNMRSLRLLYLSKTAIKELPGSIDLE-SVES 590

Query: 686 LTLNGCKNLERLPRT-----------------------ISALKYLSTLNLSGLSKFREFP 722
           L L+ C   ++ P                         IS  + L TL+LS  SKF +FP
Sbjct: 591 LDLSYCSKFKKFPENGANMKSLRELDLTHTAIKELPIGISNWESLRTLDLSKCSKFEKFP 650

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            I  +   L E+ L  TAI+  P SI  L    + N+ DC   ++ P     +++L+ + 
Sbjct: 651 AIQGNMRNLKELLLNNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLL 710

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
               + +K++ + +G++ESLE+
Sbjct: 711 LKN-TPIKDLPDGIGELESLEI 731



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 2/116 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP  I  L+ L  L+LS  SKF +FPE   +   L  ++L  TAI+ LP SI  L  
Sbjct: 716 IKDLPDGIGELESLEILDLSDCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPNSIGSLES 775

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
            +  +L +C   +  P     ++SL M+Y +  + +K++ +++G +ESL E+ LS+
Sbjct: 776 LVELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTA-IKDLPDSIGSLESLVELDLSN 830



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 25/165 (15%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPR-----------------------TISAL 704
           T I+EL + I     L  L L+ C   E+ P                        +I  L
Sbjct: 620 TAIKELPIGISNWESLRTLDLSKCSKFEKFPAIQGNMRNLKELLLNNTAIKCFPDSIGYL 679

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           K L  LN+S  SKF  FPE   +   L ++ L+ T I+ LP  I  L    + +L DC  
Sbjct: 680 KSLEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSK 739

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
            +  P     ++SL M+Y +  + +K++  ++G +ESL E+ LS+
Sbjct: 740 FEKFPEKGGNMKSLGMLYLTNTA-IKDLPNSIGSLESLVELDLSN 783



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 24/164 (14%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLER-----------------------LPRTISAL 704
           T I++L  +I  L  LV+L L+ C   E+                       LP +I +L
Sbjct: 761 TAIKDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSL 820

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           + L  L+LS  SKF +FPE   +   L+ + L  TAI+ LP SI  L   +  +L +C  
Sbjct: 821 ESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDLSNCSK 880

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
            +  P     ++ L ++Y +  + +K++ +++G ++ +++ LS+
Sbjct: 881 FEKFPEKGGNMKRLGVLYLTNTA-IKDLPDSIGSLDLVDLDLSN 923


>gi|224131108|ref|XP_002328456.1| predicted protein [Populus trichocarpa]
 gi|222838171|gb|EEE76536.1| predicted protein [Populus trichocarpa]
          Length = 317

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 156/297 (52%), Gaps = 26/297 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K L  LYLDG  +  +P SI  L  LE L L GC  L+SLP  I +LK L++L LS
Sbjct: 17  IGALKSLRWLYLDG--LVSLPDSIGALKSLEYLDLSGCSGLASLPDNIGALKSLKSLNLS 74

Query: 61  GCS--KLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLV--RL 115
           G S   L   P  + +++ L  L L G S +A +P +I +L  LE L L+ C  L    L
Sbjct: 75  GWSGLALASLPDNIGALKSLQSLRLSGCSGLASLPDNIGVLKSLESLNLHGCSGLALASL 134

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRS 174
           P +I  LKSL++L LS C  L ++PD +G ++SLE LD+ G + +     +I  +K+L S
Sbjct: 135 PDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDLHGCSGLASLPDNIGALKSLES 194

Query: 175 LYFSGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLPSLTGVC-SLTKLDLSD 225
           L  SGC       S    LP N+        L    C     LP   G   SL  L LS 
Sbjct: 195 LDLSGC-------SGLASLPDNIGALKSLKSLDLHGCSRLASLPDNIGAFKSLQSLRLSC 247

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           C  G A++P +I  L SL+ L L+  +   +LP +I  L +L+ L L  C RL SLP
Sbjct: 248 CS-GLASLPDNIGVLKSLESLNLHGCSGLASLPDNIGALKSLKSLHLSCCSRLASLP 303



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 161/317 (50%), Gaps = 40/317 (12%)

Query: 10  LYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L LDG S +  +P +I  L  L  L L G   L SLP +I +LK L  L+LSGCS L   
Sbjct: 2   LDLDGCSGLASLPDNIGALKSLRWLYLDG---LVSLPDSIGALKSLEYLDLSGCSGLASL 58

Query: 69  PQIVASMEDLSKLYLDGTS---IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           P  + +++ L  L L G S   +A +P +I  L  L+ L L+ C  L  LP +I  LKSL
Sbjct: 59  PDNIGALKSLKSLNLSGWSGLALASLPDNIGALKSLQSLRLSGCSGLASLPDNIGVLKSL 118

Query: 126 KTLNLSGCC--KLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           ++LNL GC    L ++PD +G ++SL+ L +S  + +     +I  +K+L SL   GC  
Sbjct: 119 ESLNLHGCSGLALASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDLHGC-- 176

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                S    LP N               +  + SL  LDLS C  G A++P +I  L S
Sbjct: 177 -----SGLASLPDN---------------IGALKSLESLDLSGCS-GLASLPDNIGALKS 215

Query: 243 LKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSL 298
           LK L L+  +   +LP +I    +L+ L L  C  L SLP    +  +L+ +  +GCS L
Sbjct: 216 LKSLDLHGCSRLASLPDNIGAFKSLQSLRLSCCSGLASLPDNIGVLKSLESLNLHGCSGL 275

Query: 299 VTL---FGALKLCRSKY 312
            +L    GALK  +S +
Sbjct: 276 ASLPDNIGALKSLKSLH 292



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 2/151 (1%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++K L  L L G S +  +P +I  L  LE L L GC  L+SLP  I +LK L++L+L
Sbjct: 162 IGALKSLESLDLHGCSGLASLPDNIGALKSLESLDLSGCSGLASLPDNIGALKSLKSLDL 221

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS+L   P  + + + L  L L   S +A +P +I +L  LE L L+ C  L  LP +
Sbjct: 222 HGCSRLASLPDNIGAFKSLQSLRLSCCSGLASLPDNIGVLKSLESLNLHGCSGLASLPDN 281

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           I  LKSLK+L+LS C +L ++P  +G+++ L
Sbjct: 282 IGALKSLKSLHLSCCSRLASLPGRIGELKPL 312



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 115/222 (51%), Gaps = 26/222 (11%)

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRR 161
           +L L+ C  L  LP +I  LKSL+ L L G   L ++PD++G ++SLE LD+SG + +  
Sbjct: 1   MLDLDGCSGLASLPDNIGALKSLRWLYLDG---LVSLPDSIGALKSLEYLDLSGCSGLAS 57

Query: 162 PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLPSLT 213
              +I  +K+L+SL  SG      S      LP N+        L  S C     LP   
Sbjct: 58  LPDNIGALKSLKSLNLSG-----WSGLALASLPDNIGALKSLQSLRLSGCSGLASLPDNI 112

Query: 214 GVC-SLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLN-RNNFVTLPASISGLLNLEELE 270
           GV  SL  L+L  C GL  A++P +I  L SL+ L L+  +   +LP +I  L +LE L+
Sbjct: 113 GVLKSLESLNLHGCSGLALASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESLD 172

Query: 271 LEDCKRLQSLPQ---IPPNLQFVRANGCSSLVTL---FGALK 306
           L  C  L SLP       +L+ +  +GCS L +L    GALK
Sbjct: 173 LHGCSGLASLPDNIGALKSLESLDLSGCSGLASLPDNIGALK 214



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 1/127 (0%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I  L  L  L L+GC  L  LP  I ALK L +L+L G S+    P+   +   L  + L
Sbjct: 186 IGALKSLESLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLASLPDNIGAFKSLQSLRL 245

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
              + +  LP +I +L      NL  C  L SLP  I  L+SL+ ++ S CS+L ++   
Sbjct: 246 SCCSGLASLPDNIGVLKSLESLNLHGCSGLASLPDNIGALKSLKSLHLSCCSRLASLPGR 305

Query: 796 LGKVESL 802
           +G+++ L
Sbjct: 306 IGELKPL 312



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 2/137 (1%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I  L  L  L L+GC  L  LP  I ALK L +L+LSG S     P+   +   L  + L
Sbjct: 162 IGALKSLESLDLHGCSGLASLPDNIGALKSLESLDLSGCSGLASLPDNIGALKSLKSLDL 221

Query: 737 EGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            G + +  LP +I          L  C  L SLP  I  L+SL  +   GCS L ++ + 
Sbjct: 222 HGCSRLASLPDNIGAFKSLQSLRLSCCSGLASLPDNIGVLKSLESLNLHGCSGLASLPDN 281

Query: 796 LGKVESLE-VRLSSWNR 811
           +G ++SL+ + LS  +R
Sbjct: 282 IGALKSLKSLHLSCCSR 298



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 4/135 (2%)

Query: 677 IELLFGLVQLTLNGCKNLE--RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           I +L  L  L L+GC  L    LP  I ALK L +L LS  S     P+   +   L  +
Sbjct: 112 IGVLKSLESLNLHGCSGLALASLPDNIGALKSLQSLRLSCCSGLASLPDNIGALKSLESL 171

Query: 735 HLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
            L G + +  LP +I  L      +L  C  L SLP  I  L+SL+ +   GCS+L ++ 
Sbjct: 172 DLHGCSGLASLPDNIGALKSLESLDLSGCSGLASLPDNIGALKSLKSLDLHGCSRLASLP 231

Query: 794 ETLGKVESLE-VRLS 807
           + +G  +SL+ +RLS
Sbjct: 232 DNIGAFKSLQSLRLS 246



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 29/157 (18%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS--KFREFPEITSSRDQLLE 733
           +I  L  L  L L+GC  L  LP  I ALK L +LNLSG S       P+   +   L  
Sbjct: 37  SIGALKSLEYLDLSGCSGLASLPDNIGALKSLKSLNLSGWSGLALASLPDNIGALKSLQS 96

Query: 734 IHLEG-TAIRGLPASIELL-----------SGNILSNLKD---------------CKNLK 766
           + L G + +  LP +I +L           SG  L++L D               C  L 
Sbjct: 97  LRLSGCSGLASLPDNIGVLKSLESLNLHGCSGLALASLPDNIGALKSLQSLRLSCCSGLA 156

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           SLP  I  L+SL  +   GCS L ++ + +G ++SLE
Sbjct: 157 SLPDNIGALKSLESLDLHGCSGLASLPDNIGALKSLE 193



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 1/128 (0%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I  L  L  L L+ C  L  LP  I ALK L +L+L G S     P+   +   L  + L
Sbjct: 138 IGALKSLQSLRLSCCSGLASLPDNIGALKSLESLDLHGCSGLASLPDNIGALKSLESLDL 197

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            G + +  LP +I  L      +L  C  L SLP  I   +SL+ +  S CS L ++ + 
Sbjct: 198 SGCSGLASLPDNIGALKSLKSLDLHGCSRLASLPDNIGAFKSLQSLRLSCCSGLASLPDN 257

Query: 796 LGKVESLE 803
           +G ++SLE
Sbjct: 258 IGVLKSLE 265



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS--KFREFPEITSSRDQLLEI 734
           I  L  L  L L+GC  L  LP  I  LK L +LNL G S       P+   +   L  +
Sbjct: 88  IGALKSLQSLRLSGCSGLASLPDNIGVLKSLESLNLHGCSGLALASLPDNIGALKSLQSL 147

Query: 735 HLE-GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
            L   + +  LP +I  L      +L  C  L SLP  I  L+SL  +  SGCS L ++ 
Sbjct: 148 RLSCCSGLASLPDNIGALKSLESLDLHGCSGLASLPDNIGALKSLESLDLSGCSGLASLP 207

Query: 794 ETLGKVESLE 803
           + +G ++SL+
Sbjct: 208 DNIGALKSLK 217



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 6/122 (4%)

Query: 685 QLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRG 743
            L L+GC  L  LP  I ALK L  L L GL      P+   +   L  + L G + +  
Sbjct: 1   MLDLDGCSGLASLPDNIGALKSLRWLYLDGL---VSLPDSIGALKSLEYLDLSGCSGLAS 57

Query: 744 LPASIELLSGNILSNLKDCKN--LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           LP +I  L      NL       L SLP  I  L+SL+ +  SGCS L ++ + +G ++S
Sbjct: 58  LPDNIGALKSLKSLNLSGWSGLALASLPDNIGALKSLQSLRLSGCSGLASLPDNIGVLKS 117

Query: 802 LE 803
           LE
Sbjct: 118 LE 119


>gi|449470346|ref|XP_004152878.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1074

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 174/369 (47%), Gaps = 34/369 (9%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L+ L+ L LS   KLKK P     + +L +L L   T+++ +  SI  L  L L+ L  C
Sbjct: 549 LENLKVLNLSHSEKLKKSPNF-TKLPNLEQLKLKNCTALSSLHPSIGQLCKLHLINLQNC 607

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            NL  LP+SI  L SL+T  +SGC K++ + D LG +ESL  L    TAI     SI  +
Sbjct: 608 TNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGHLESLTTLLADRTAISHIPFSIVKL 667

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLG------KSSCPVALMLP-SLTGVCSLTKLD 222
           K L  L   GCN    S S    LP+ L+         +C  AL LP SL G+ SLT+L 
Sbjct: 668 KKLTDLSLCGCNCRSGSGS-SASLPWRLVSWALPRPNQTC-TALTLPSSLQGLSSLTELS 725

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L +C L   ++P DI +L  LK+L L  N N   L   + GLL L EL +E+C RL+ + 
Sbjct: 726 LQNCNL--ESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRLEFIQ 783

Query: 282 QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIIN---------------CIDSLKLLRK 326
           + P N++   A  C SLV         R+   I+                C  ++++   
Sbjct: 784 EFPKNMRSFCATSCKSLVRTPDVSMFERAPNMILTNCCALLEVCGLDKLECSTNIRMAGC 843

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKV 386
           + L+       LE  +    G   S+   G+Q+PK   +      +T   P+   N N +
Sbjct: 844 SNLSTDFRMSLLEKWSGDGLG---SLCVAGNQLPKCLHFFTTHPPLTFQVPN--INNNIL 898

Query: 387 VGFAICCVF 395
           +G  I  +F
Sbjct: 899 LGLTIFAIF 907



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
           R    L+ L  LNLS   K ++ P  T   + L ++ L+  TA+  L  SI  L    L 
Sbjct: 544 RDSQILENLKVLNLSHSEKLKKSPNFTKLPN-LEQLKLKNCTALSSLHPSIGQLCKLHLI 602

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
           NL++C NL SLP++I  L SL+    SGCSK+  + + LG +ESL   L+
Sbjct: 603 NLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIDCLHDDLGHLESLTTLLA 652


>gi|297850940|ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339193|gb|EFH69610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 188/412 (45%), Gaps = 53/412 (12%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  +  L +LYLD T++  +P SI  L  L+ L    C +LS +P TI+ LK L+ L L+
Sbjct: 817  VGKLTSLEELYLDDTALQNLPDSIGNLKNLQKLHFMHCASLSKIPDTINELKSLKELFLN 876

Query: 61   G-----------------------CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
            G                       C  LK  P  +  +  L +L LD T I  +P  I  
Sbjct: 877  GSAVEELPLNPGSLPDLSDLSAGGCKFLKHVPSSIGGLNYLLQLQLDRTPIETLPEEIGD 936

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG- 156
            L  L  L L  CK+L  LP SI  +  L +L L G   +EN+P+  GK+E L  L ++  
Sbjct: 937  LHFLHKLELRNCKSLKGLPESIKDMDQLHSLYLEGS-NIENLPEDFGKLEKLVLLRMNNC 995

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW----------HLHLPFNLLGKSSCPVA 206
              +R    S   +K+L  L+    +      S+           L  PF    +S  P  
Sbjct: 996  KKLRGLPESFGDLKSLHRLFMQETSVTKLPESFGNLSNLRVLKMLKKPFFRSSESEEPHF 1055

Query: 207  LMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            + LP S + + SL +LD     +    IP D++ L S+K L L  N F +LP+S+ GL N
Sbjct: 1056 VELPNSFSNLSSLEELDARSWAIS-GKIPDDLEKLTSMKILNLGNNYFHSLPSSLKGLSN 1114

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGCSSL--VTLFGALKLCRSKYTIINCIDSLKL 323
            L++L L DC+ L+ LP +P  L+ +    C SL  ++    LK    +  + NC   + +
Sbjct: 1115 LKKLSLYDCRELKCLPPLPWRLEQLILANCFSLESISDLSNLKFL-DELNLTNCEKVVDI 1173

Query: 324  LRKNGLAISMLREYLE----------LQAVSDPGHKL--SIVFPGSQIPKWF 363
            L    L  ++ R Y+            + +S    KL  ++  PG++IP WF
Sbjct: 1174 LGLEHLT-ALKRLYMSGCNSTCSLAVKRRLSKASLKLLWNLSLPGNRIPDWF 1224



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 154/329 (46%), Gaps = 44/329 (13%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + +VP S+  L  L  L L+ C  LS     +S LKCL  L LSGCS L   P+ + SM 
Sbjct: 715  LVKVPRSVGNLRKLLQLDLRRCSKLSEFLEDVSELKCLEKLFLSGCSNLSVLPENIGSMP 774

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
             L +L LDGT+I+ +P SI  L  LE L L  C++                       L 
Sbjct: 775  CLKELLLDGTAISNLPDSIFCLQKLEKLSLMGCRSIQELPTCVGKLTSLEELYLDDTALQ 834

Query: 114  RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
             LP SI  LK+L+ L+   C  L  +PDT+ +++SL+EL ++G+A+     +   + +L 
Sbjct: 835  NLPDSIGNLKNLQKLHFMHCASLSKIPDTINELKSLKELFLNGSAVEELPLNPGSLPDLS 894

Query: 174  SLYFSGC----NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC--- 226
             L   GC    + P +    +  L   L      P+  +   +  +  L KL+L +C   
Sbjct: 895  DLSAGGCKFLKHVPSSIGGLNYLLQLQL---DRTPIETLPEEIGDLHFLHKLELRNCKSL 951

Query: 227  -GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
             GL E+    D+D LHS   LYL  +N   LP     L  L  L + +CK+L+ LP+   
Sbjct: 952  KGLPESI--KDMDQLHS---LYLEGSNIENLPEDFGKLEKLVLLRMNNCKKLRGLPESFG 1006

Query: 286  NLQ-----FVRANGCSSLVTLFGALKLCR 309
            +L+     F++    + L   FG L   R
Sbjct: 1007 DLKSLHRLFMQETSVTKLPESFGNLSNLR 1035



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 139/262 (53%), Gaps = 16/262 (6%)

Query: 29  GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS- 87
            LE L  + C  L  +P ++ +L+ L  L+L  CSKL +F + V+ ++ L KL+L G S 
Sbjct: 703 ALEKLVFERCNLLVKVPRSVGNLRKLLQLDLRRCSKLSEFLEDVSELKCLEKLFLSGCSN 762

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           ++ +P +I  +P L+ L L+    +  LP SI  L+ L+ L+L GC  ++ +P  +GK+ 
Sbjct: 763 LSVLPENIGSMPCLKELLLDGTA-ISNLPDSIFCLQKLEKLSLMGCRSIQELPTCVGKLT 821

Query: 148 SLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCP 204
           SLEEL +  TA++    SI  +KNL+ L+F  C   ++ P + +    L    L  S+  
Sbjct: 822 SLEELYLDDTALQNLPDSIGNLKNLQKLHFMHCASLSKIPDTINELKSLKELFLNGSAVE 881

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAA----IPSDIDNLHSLKELYLNRNNFVTLPASI 260
              + P      SL   DLSD   G       +PS I  L+ L +L L+R    TLP  I
Sbjct: 882 ELPLNPG-----SLP--DLSDLSAGGCKFLKHVPSSIGGLNYLLQLQLDRTPIETLPEEI 934

Query: 261 SGLLNLEELELEDCKRLQSLPQ 282
             L  L +LEL +CK L+ LP+
Sbjct: 935 GDLHFLHKLELRNCKSLKGLPE 956



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 24/183 (13%)

Query: 645  GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
             + S++ +  +E   + ++  +G+ + EL L    L  L  L+  GCK L+ +P +I  L
Sbjct: 855  ASLSKIPDTINELKSLKELFLNGSAVEELPLNPGSLPDLSDLSAGGCKFLKHVPSSIGGL 914

Query: 705  KYL-----------------------STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
             YL                         L L      +  PE     DQL  ++LEG+ I
Sbjct: 915  NYLLQLQLDRTPIETLPEEIGDLHFLHKLELRNCKSLKGLPESIKDMDQLHSLYLEGSNI 974

Query: 742  RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
              LP     L   +L  + +CK L+ LP +   L+SL  ++    S  K + E+ G + +
Sbjct: 975  ENLPEDFGKLEKLVLLRMNNCKKLRGLPESFGDLKSLHRLFMQETSVTK-LPESFGNLSN 1033

Query: 802  LEV 804
            L V
Sbjct: 1034 LRV 1036



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L  C  L      +S LK L  L LSG S     PE   S   L E+ L+GTAI 
Sbjct: 728 LLQLDLRRCSKLSEFLEDVSELKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAIS 787

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +L  C++++ LP+ +  L SL  +Y    + L+N+ +++G +++L
Sbjct: 788 NLPDSIFCLQKLEKLSLMGCRSIQELPTCVGKLTSLEELYLDDTA-LQNLPDSIGNLKNL 846

Query: 803 E 803
           +
Sbjct: 847 Q 847



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 24/142 (16%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S L E     P + ++L DGT I  L  +I  L  L +L+L GC++++ LP  +  L 
Sbjct: 762 NLSVLPENIGSMPCLKELLLDGTAISNLPDSIFCLQKLEKLSLMGCRSIQELPTCVGKLT 821

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L                         E++L+ TA++ LP SI  L      +   C +L
Sbjct: 822 SLE------------------------ELYLDDTALQNLPDSIGNLKNLQKLHFMHCASL 857

Query: 766 KSLPSTINGLRSLRMMYPSGCS 787
             +P TIN L+SL+ ++ +G +
Sbjct: 858 SKIPDTINELKSLKELFLNGSA 879


>gi|297835804|ref|XP_002885784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331624|gb|EFH62043.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 673

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 180/358 (50%), Gaps = 59/358 (16%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTI----------- 48
           +++  +L +LYL+G  S+ E+P SI     L++L L GC +L  LP +I           
Sbjct: 15  LSTATNLQELYLNGCISLVELPYSIGNAIYLKILELSGCSSLVELPFSIGNAINLQDLYL 74

Query: 49  ---SSL----------KCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSS 94
              SSL            LR L+LSGCS L + P  + S  +L  LYL + +S+ ++PSS
Sbjct: 75  SNFSSLVELPSSIENATTLRKLDLSGCSSLVELPSSLGSAINLQDLYLINCSSLVKLPSS 134

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           I      ++L L+ C +LV LPSSI    +L+TLNLS CC+L  +P ++G   +L+ L++
Sbjct: 135 IRNAANHKILDLSGCSSLVELPSSIGNATNLQTLNLSNCCRLVELPSSIGNATNLQTLNL 194

Query: 155 SG-TAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLP 210
           SG +++    SSI    NL++L    C    E P+S     +L    L  S C   + LP
Sbjct: 195 SGCSSLVELPSSIGNATNLQTLNLRNCLSLVELPSSIGKATNL--QTLNLSDCHRLVELP 252

Query: 211 SLTG-VCSLTKLDLSDC--------GLGEAA---------------IPSDIDNLHSLKEL 246
           +  G   +L  L+L DC         +G+A                +PS I N  S ++L
Sbjct: 253 TSIGNATNLQTLNLRDCLSLAQLPSSIGKATHLQSLNLSYCTSLVELPSLIGNATSFQKL 312

Query: 247 YLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN--GCSSLVTL 301
            L+   + V LP+SI  + NL+ L L DCK L  LP    NL  +  +  GCSSLV L
Sbjct: 313 NLSYCTSLVRLPSSIGNVSNLQTLNLRDCKSLVELPSSIGNLTKLDLDIRGCSSLVEL 370



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 174/381 (45%), Gaps = 47/381 (12%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+PS I   T  + L L  C +L  LP +I ++  L+TL L  C  L + P   +S
Sbjct: 294 TSLVELPSLIGNATSFQKLNLSYCTSLVRLPSSIGNVSNLQTLNLRDCKSLVELP---SS 350

Query: 75  MEDLSKLYLD---GTSIAEVPSSIELL----PGLELLYLNECKNLVRLPSSINGLKSLKT 127
           + +L+KL LD    +S+ E+PSSI        G  +   N C +L+++PSSI     L++
Sbjct: 351 IGNLTKLDLDIRGCSSLVELPSSIGNFIMNQDGGNIYSFNTCTSLLQIPSSIGNAIKLES 410

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGCNE--- 182
           LN  GC  L +VP ++G + +L+ L  S   + +  PT  I  + NL  L F+GC+    
Sbjct: 411 LNFYGCSSLVDVPASIGNLINLDVLVFSECSSLVEVPT-CIGNLINLTYLDFNGCSSLVA 469

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            PAS   +LH    +L    C    +LP    + SL +L LS C       P    N   
Sbjct: 470 IPASI-GNLH-KLRMLAMKGCSKLEILPGNVNLKSLDRLVLSGCS-SLRCFPEISTN--- 523

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---------FVRAN 293
           ++ELYL+      +P+ I   L LE L++  CK L+     P ++             A 
Sbjct: 524 IRELYLSGTAIEVVPSFIWSCLRLETLDMSYCKNLKEFLHTPDSITGHDSKRKKVSPFAE 583

Query: 294 GCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
            C SL  L+ +   C + Y  +N  +  KL ++    I      L              V
Sbjct: 584 NCESLERLYSS---CHNPYISLNFDNCFKLNQEARDLIIQTSTQLT-------------V 627

Query: 354 FPGSQIPKWFMYQNEGSSITV 374
            PG  IP +F Y+  G S+ V
Sbjct: 628 LPGGDIPTYFTYRASGGSLVV 648



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 33/150 (22%)

Query: 2   ASMKDLSDL----YLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTL 57
           AS+ +L +L    + + +S+ EVP+ I  L  L  L   GC +L ++P +I +L  LR L
Sbjct: 424 ASIGNLINLDVLVFSECSSLVEVPTCIGNLINLTYLDFNGCSSLVAIPASIGNLHKLRML 483

Query: 58  ELSGCSK-----------------------LKKFPQIVASMEDLSKLYLDGTSIAEVPSS 94
            + GCSK                       L+ FP+I  ++ +   LYL GT+I  VPS 
Sbjct: 484 AMKGCSKLEILPGNVNLKSLDRLVLSGCSSLRCFPEISTNIRE---LYLSGTAIEVVPSF 540

Query: 95  IELLPGLELLYLNECKNL---VRLPSSING 121
           I     LE L ++ CKNL   +  P SI G
Sbjct: 541 IWSCLRLETLDMSYCKNLKEFLHTPDSITG 570



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 2/136 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD   + EL  +I     L  L L  C +L +LP +I    +L +LNLS  +   E P 
Sbjct: 242 LSDCHRLVELPTSIGNATNLQTLNLRDCLSLAQLPSSIGKATHLQSLNLSYCTSLVELPS 301

Query: 724 ITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +  +     +++L   T++  LP+SI  +S     NL+DCK+L  LPS+I  L  L +  
Sbjct: 302 LIGNATSFQKLNLSYCTSLVRLPSSIGNVSNLQTLNLRDCKSLVELPSSIGNLTKLDLDI 361

Query: 783 PSGCSKLKNVTETLGK 798
             GCS L  +  ++G 
Sbjct: 362 -RGCSSLVELPSSIGN 376



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 70/144 (48%), Gaps = 19/144 (13%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L + GC  LE LP  ++ LK L  L LSG S  R FPEI++    + E++L GT
Sbjct: 477 LHKLRMLAMKGCSKLEILPGNVN-LKSLDRLVLSGCSSLRCFPEIST---NIRELYLSGT 532

Query: 740 AIRGLPASI-ELLSGNILSNLKDCKNLKSL---PSTINGLRSLRMMYPSGCSKLKNVTET 795
           AI  +P+ I   L    L ++  CKNLK     P +I G  S R          K V+  
Sbjct: 533 AIEVVPSFIWSCLRLETL-DMSYCKNLKEFLHTPDSITGHDSKR----------KKVSPF 581

Query: 796 LGKVESLEVRLSSWNRPKMQNDFD 819
               ESLE   SS + P +  +FD
Sbjct: 582 AENCESLERLYSSCHNPYISLNFD 605



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  +I     L  L L+ C  L  LP +I     L TLNLSG S   E P 
Sbjct: 146 LSGCSSLVELPSSIGNATNLQTLNLSNCCRLVELPSSIGNATNLQTLNLSGCSSLVELPS 205

Query: 724 ITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  ++L    ++  LP+SI   +     NL DC  L  LP++I    +L+ + 
Sbjct: 206 SIGNATNLQTLNLRNCLSLVELPSSIGKATNLQTLNLSDCHRLVELPTSIGNATNLQTLN 265

Query: 783 PSGCSKLKNVTETLGKVESLE 803
              C  L  +  ++GK   L+
Sbjct: 266 LRDCLSLAQLPSSIGKATHLQ 286



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 18/136 (13%)

Query: 655 DEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           +E PD    LS  T+++EL              LNGC +L  LP +I    YL  L LSG
Sbjct: 10  NELPD----LSTATNLQEL-------------YLNGCISLVELPYSIGNAIYLKILELSG 52

Query: 715 LSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
            S   E P    +   L +++L   +++  LP+SIE  +     +L  C +L  LPS++ 
Sbjct: 53  CSSLVELPFSIGNAINLQDLYLSNFSSLVELPSSIENATTLRKLDLSGCSSLVELPSSLG 112

Query: 774 GLRSLRMMYPSGCSKL 789
              +L+ +Y   CS L
Sbjct: 113 SAINLQDLYLINCSSL 128



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  +I     L  L L+   +L  LP +I     L  L+LSG S   E P 
Sbjct: 50  LSGCSSLVELPFSIGNAINLQDLYLSNFSSLVELPSSIENATTLRKLDLSGCSSLVELPS 109

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S   L +++L   +++  LP+SI   + + + +L  C +L  LPS+I    +L+ + 
Sbjct: 110 SLGSAINLQDLYLINCSSLVKLPSSIRNAANHKILDLSGCSSLVELPSSIGNATNLQTLN 169

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            S C +L  +  ++G   +L+
Sbjct: 170 LSNCCRLVELPSSIGNATNLQ 190



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 16/151 (10%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  T + EL   I       +L L+ C +L RLP +I  +  L TLNL       E P 
Sbjct: 290 LSYCTSLVELPSLIGNATSFQKLNLSYCTSLVRLPSSIGNVSNLQTLNLRDCKSLVELP- 348

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLS--GNILSN--------LKDCKNLKSLPSTIN 773
             SS   L ++ L+   IRG  + +EL S  GN + N           C +L  +PS+I 
Sbjct: 349 --SSIGNLTKLDLD---IRGCSSLVELPSSIGNFIMNQDGGNIYSFNTCTSLLQIPSSIG 403

Query: 774 GLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
               L  +   GCS L +V  ++G + +L+V
Sbjct: 404 NAIKLESLNFYGCSSLVDVPASIGNLINLDV 434



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 5/166 (3%)

Query: 643 EPGNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           E   CS L E      + + +    LS+ + + EL  +IE    L +L L+GC +L  LP
Sbjct: 49  ELSGCSSLVELPFSIGNAINLQDLYLSNFSSLVELPSSIENATTLRKLDLSGCSSLVELP 108

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
            ++ +   L  L L   S   + P    +      + L G +++  LP+SI   +     
Sbjct: 109 SSLGSAINLQDLYLINCSSLVKLPSSIRNAANHKILDLSGCSSLVELPSSIGNATNLQTL 168

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           NL +C  L  LPS+I    +L+ +  SGCS L  +  ++G   +L+
Sbjct: 169 NLSNCCRLVELPSSIGNATNLQTLNLSGCSSLVELPSSIGNATNLQ 214



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E      +   +    LS+   + EL  +I     L  L L+GC +L  LP +I 
Sbjct: 149 CSSLVELPSSIGNATNLQTLNLSNCCRLVELPSSIGNATNLQTLNLSGCSSLVELPSSIG 208

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKD 761
               L TLNL       E P        L  ++L     +  LP SI   +     NL+D
Sbjct: 209 NATNLQTLNLRNCLSLVELPSSIGKATNLQTLNLSDCHRLVELPTSIGNATNLQTLNLRD 268

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           C +L  LPS+I     L+ +  S C+ L  +   +G   S +
Sbjct: 269 CLSLAQLPSSIGKATHLQSLNLSYCTSLVELPSLIGNATSFQ 310



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 12/166 (7%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELL---------FGLVQLTLNGCKNLERL 697
           CS L E      + +    DG +I   +    LL           L  L   GC +L  +
Sbjct: 364 CSSLVELPSSIGNFIMN-QDGGNIYSFNTCTSLLQIPSSIGNAIKLESLNFYGCSSLVDV 422

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNIL 756
           P +I  L  L  L  S  S   E P    +   L  +   G +++  +PASI  L    +
Sbjct: 423 PASIGNLINLDVLVFSECSSLVEVPTCIGNLINLTYLDFNGCSSLVAIPASIGNLHKLRM 482

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             +K C  L+ LP  +N L+SL  +  SGCS L+   E    +  L
Sbjct: 483 LAMKGCSKLEILPGNVN-LKSLDRLVLSGCSSLRCFPEISTNIREL 527


>gi|449530355|ref|XP_004172161.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 987

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 173/369 (46%), Gaps = 34/369 (9%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L+ L+ L LS   KLKK P     + +L +L L   T+++ +  SI  L  L L+ L  C
Sbjct: 476 LENLKVLNLSHSEKLKKSPNF-TKLPNLEQLKLKNCTALSSLHPSIGQLCKLHLINLQNC 534

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            NL  LP+SI  L SL+T  +SGC K+  + D LG +ESL  L    TAI     SI  +
Sbjct: 535 TNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGHLESLTTLLADRTAISHIPFSIVKL 594

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLG------KSSCPVALMLP-SLTGVCSLTKLD 222
           K L  L   GCN    S S    LP+ L+         +C  AL LP SL G+ SLT+L 
Sbjct: 595 KKLTDLSLCGCNCRSGSGS-SASLPWRLVSWALPRPNQTC-TALTLPSSLQGLSSLTELS 652

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L +C L   ++P DI +L  LK+L L  N N   L   + GLL L EL +E+C RL+ + 
Sbjct: 653 LQNCNL--ESLPIDIGSLSELKKLNLGGNKNLRVLGTELCGLLKLNELNVENCGRLEFIQ 710

Query: 282 QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIIN---------------CIDSLKLLRK 326
           + P N++   A  C SLV         R+   I+                C  ++++   
Sbjct: 711 EFPKNMRSFCATNCKSLVRTPDVSMFERAPNMILTNCCALLEVCGLDKLECSTNIRMAGC 770

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKV 386
           + L+       LE  +    G   S+   G+Q+PK   +      +T   P+   N N +
Sbjct: 771 SNLSTDFRMSLLEKWSGDGLG---SLCVAGNQLPKCLHFFTTHPPLTFQVPN--INNNIL 825

Query: 387 VGFAICCVF 395
           +G  I  +F
Sbjct: 826 LGLTIFAIF 834



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
           R    L+ L  LNLS   K ++ P  T   + L ++ L+  TA+  L  SI  L    L 
Sbjct: 471 RDSQILENLKVLNLSHSEKLKKSPNFTKLPN-LEQLKLKNCTALSSLHPSIGQLCKLHLI 529

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
           NL++C NL SLP++I  L SL+    SGCSK+  + + LG +ESL   L+
Sbjct: 530 NLQNCTNLSSLPTSIYNLHSLQTFIISGCSKIHCLHDDLGHLESLTTLLA 579


>gi|224131106|ref|XP_002328455.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838170|gb|EEE76535.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1150

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 168/319 (52%), Gaps = 33/319 (10%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S   +PSSI  L+ L  L L  C++L+SLP  I  LK L  L+L  CSKL   P  +  +
Sbjct: 596 SFYTLPSSIGCLSQLVRLNLSSCESLASLPDNIDELKSLVELDLYSCSKLASLPNSICKL 655

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           + L+KL     ++A +P SI  L  LE L L+ C  L  LP+SI  LKSL+ L+L+GC  
Sbjct: 656 KCLTKL-----NLASLPDSIGELRSLEELDLSSCSKLASLPNSIGELKSLQWLDLNGCSG 710

Query: 136 LENVPDTLGKVESLEELDVSG------------TAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           L ++PD +G+++SL+  D++G            + +    SSI  +K+L+SL+    ++ 
Sbjct: 711 LASLPDNIGELKSLQWFDLNGCFGLASFDLNGCSGLASLPSSIGALKSLKSLFLRVASQQ 770

Query: 184 PAS---ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            +     S    +P   LG +S P      S+  + SL  L  S C  G A++P +I +L
Sbjct: 771 DSIDELESLKSLIPSGCLGLTSLP-----DSIGALKSLENLYFSGCS-GLASLPDNIGSL 824

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCS 296
            SLK L L+  +   +L   I  L +LE+LEL  C  L SLP       +L++++ +GCS
Sbjct: 825 KSLKSLTLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLPDNIGTLKSLKWLKLDGCS 884

Query: 297 SLVTL---FGALKLCRSKY 312
            L +L    G LK  +  Y
Sbjct: 885 GLASLPDRIGELKSLKQLY 903



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 168/327 (51%), Gaps = 31/327 (9%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + ++K L +LY  G S +  +P +I  L  L+ LTL GC  L+SL   I  LK L  LEL
Sbjct: 797  IGALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLEL 856

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            +GC  L   P  + +++ L  L LDG S +A +P  I  L  L+ LYLN C  L  L  +
Sbjct: 857  NGCLGLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDN 916

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
            I  LKSLK L L+GC  L ++PD +G+++SLE L+++G + +     +I  +K L+ L F
Sbjct: 917  IGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDF 976

Query: 178  SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
             GC+     AS    LP N               +  + SL  L L  C  G A++P  I
Sbjct: 977  FGCSGLAKLAS----LPDN---------------IGTLKSLKWLKLDGCS-GLASLPDRI 1016

Query: 238  DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRAN 293
              L SLK+LYLN  +   +L  +I  L +L++L L  C  L SLP       +L+ +  N
Sbjct: 1017 GELKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELN 1076

Query: 294  GCSSLVTL---FGALKLCRSKYTIINC 317
            GCS L +L     ALK C  K     C
Sbjct: 1077 GCSGLASLPDTIDALK-CLKKLDFFGC 1102



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 166/381 (43%), Gaps = 69/381 (18%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR---- 55
            +  ++ L +L L   S +  +P+SI  L  L+ L L GC  L+SLP  I  LK L+    
Sbjct: 670  IGELRSLEELDLSSCSKLASLPNSIGELKSLQWLDLNGCSGLASLPDNIGELKSLQWFDL 729

Query: 56   -------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTS--------------------- 87
                   + +L+GCS L   P  + +++ L  L+L   S                     
Sbjct: 730  NGCFGLASFDLNGCSGLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLG 789

Query: 88   IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
            +  +P SI  L  LE LY + C  L  LP +I  LKSLK+L L GC  L ++ D +G+++
Sbjct: 790  LTSLPDSIGALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELK 849

Query: 148  SLEELDVSG-------------------------TAIRRPTSSIFLMKNLRSLYFSGCNE 182
            SLE+L+++G                         + +      I  +K+L+ LY +GC+E
Sbjct: 850  SLEKLELNGCLGLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSE 909

Query: 183  PPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
              +       L     L  + C     LP   G     +L   +   G A++P  ID L 
Sbjct: 910  LASLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALK 969

Query: 242  SLKELYL----NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NG 294
             LK+L            +LP +I  L +L+ L+L+ C  L SLP     L+ ++    NG
Sbjct: 970  CLKKLDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNG 1029

Query: 295  CSSLVTL---FGALKLCRSKY 312
            CS L +L    G LK  +  Y
Sbjct: 1030 CSELASLTDNIGELKSLKQLY 1050



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 111/187 (59%), Gaps = 6/187 (3%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  +K L  LYL+G S +  +P  I  L  LELL L GC  L+SLP TI +LKCL+ L+ 
Sbjct: 917  IGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDF 976

Query: 60   SGCS---KLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRL 115
             GCS   KL   P  + +++ L  L LDG S +A +P  I  L  L+ LYLN C  L  L
Sbjct: 977  FGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASL 1036

Query: 116  PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRS 174
              +I  LKSLK L L+GC  L ++PD +G+++SLE L+++G + +     +I  +K L+ 
Sbjct: 1037 TDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKK 1096

Query: 175  LYFSGCN 181
            L F GC+
Sbjct: 1097 LDFFGCS 1103



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 2/163 (1%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            +  +P +I  L  L+ L L GC  L+SLP  I  LK L+ L L+GCS+L      +  ++
Sbjct: 985  LASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELK 1044

Query: 77   DLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
             L +LYL+G S +A +P  I  L  LELL LN C  L  LP +I+ LK LK L+  GC  
Sbjct: 1045 SLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSG 1104

Query: 136  LENVPDTLGKVESLE-ELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            L ++P+ +G++ESL+    +      + T     MK+L SL F
Sbjct: 1105 LASLPNNIGELESLQFSFVLLFLRTSKSTGQHLRMKSLESLVF 1147



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 1/129 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L  +GC  L  LP  I +LK L +L L G S      +       L ++ 
Sbjct: 796 SIGALKSLENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLE 855

Query: 736 LEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L G   +  LP +I  L       L  C  L SLP  I  L+SL+ +Y +GCS+L ++T+
Sbjct: 856 LNGCLGLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTD 915

Query: 795 TLGKVESLE 803
            +G+++SL+
Sbjct: 916 NIGELKSLK 924



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 118/286 (41%), Gaps = 82/286 (28%)

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC----------------- 133
           +PSSI+    L  L L   ++   LPSSI  L  L  LNLS C                 
Sbjct: 576 IPSSIKYSTRLTTLELPRLESFYTLPSSIGCLSQLVRLNLSSCESLASLPDNIDELKSLV 635

Query: 134 -----------------CKLE--------NVPDTLGKVESLEELDVSG-TAIRRPTSSIF 167
                            CKL+        ++PD++G++ SLEELD+S  + +    +SI 
Sbjct: 636 ELDLYSCSKLASLPNSICKLKCLTKLNLASLPDSIGELRSLEELDLSSCSKLASLPNSIG 695

Query: 168 LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
            +K+L+ L  +GC       S    LP N+    S    L    L G   L   DL+ C 
Sbjct: 696 ELKSLQWLDLNGC-------SGLASLPDNIGELKS----LQWFDLNGCFGLASFDLNGCS 744

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNN---------------------FVTLPASISGLLNL 266
            G A++PS I  L SLK L+L   +                       +LP SI  L +L
Sbjct: 745 -GLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLGLTSLPDSIGALKSL 803

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL---FGALK 306
           E L    C  L SLP    +L+ +++   +GCS L +L    G LK
Sbjct: 804 ENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELK 849



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 7/125 (5%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
           FGL    LNGC  L  LP +I ALK L +L L   S+     E+ S +  +    L    
Sbjct: 733 FGLASFDLNGCSGLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCL---G 789

Query: 741 IRGLPASIELLSGNILSNL--KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +  LP SI  L    L NL    C  L SLP  I  L+SL+ +   GCS L ++ + +G+
Sbjct: 790 LTSLPDSIGALKS--LENLYFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGE 847

Query: 799 VESLE 803
           ++SLE
Sbjct: 848 LKSLE 852



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 5/161 (3%)

Query: 648  SRLWEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            + L +   E   + Q+  +G +++  L+  I  L  L QL LNGC  L  LP  I  LK 
Sbjct: 887  ASLPDRIGELKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKS 946

Query: 707  LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA----IRGLPASIELLSGNILSNLKDC 762
            L  L L+G S     P+   +   L ++   G +    +  LP +I  L       L  C
Sbjct: 947  LELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGC 1006

Query: 763  KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              L SLP  I  L+SL+ +Y +GCS+L ++T+ +G+++SL+
Sbjct: 1007 SGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELKSLK 1047



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 1/119 (0%)

Query: 686  LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
            L L+GC  L  LP  I  LK L  L L+G S+     +       L +++L G + +  L
Sbjct: 1001 LKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASL 1060

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            P  I  L    L  L  C  L SLP TI+ L+ L+ +   GCS L ++   +G++ESL+
Sbjct: 1061 PDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGLASLPNNIGELESLQ 1119



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)

Query: 689  NGCKNLERLPRTISALKYLSTLNL---SGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
            NGC  L  LP TI ALK L  L+    SGL+K    P+   +   L  + L+G + +  L
Sbjct: 953  NGCSGLASLPDTIDALKCLKKLDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLASL 1012

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
            P  I  L       L  C  L SL   I  L+SL+ +Y +GCS L ++ + +G
Sbjct: 1013 PDRIGELKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASLPDRIG 1065



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 5/128 (3%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  LV+L L+ C++L  LP  I  LK L  L+L   SK    P        L +++
Sbjct: 603 SIGCLSQLVRLNLSSCESLASLPDNIDELKSLVELDLYSCSKLASLPNSICKLKCLTKLN 662

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L       LP SI  L      +L  C  L SLP++I  L+SL+ +  +GCS L ++ + 
Sbjct: 663 LAS-----LPDSIGELRSLEELDLSSCSKLASLPNSIGELKSLQWLDLNGCSGLASLPDN 717

Query: 796 LGKVESLE 803
           +G+++SL+
Sbjct: 718 IGELKSLQ 725



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  +K L  LYL+G S +  +P  I  L  LELL L GC  L+SLP TI +LKCL+ L+ 
Sbjct: 1040 IGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDF 1099

Query: 60   SGCSKLKKFPQIVASMEDL 78
             GCS L   P  +  +E L
Sbjct: 1100 FGCSGLASLPNNIGELESL 1118



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 4/122 (3%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           L L+GC  L  LP  I  LK L  L L+G S+     +       L +++L G + +  L
Sbjct: 878 LKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASL 937

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS---KLKNVTETLGKVES 801
           P  I  L    L  L  C  L SLP TI+ L+ L+ +   GCS   KL ++ + +G ++S
Sbjct: 938 PDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGLAKLASLPDNIGTLKS 997

Query: 802 LE 803
           L+
Sbjct: 998 LK 999



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 1/116 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  LTL+GC  L  L   I  LK L  L L+G       P+   +   L  + L+G + +
Sbjct: 827 LKSLTLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLPDNIGTLKSLKWLKLDGCSGL 886

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             LP  I  L       L  C  L SL   I  L+SL+ +Y +GCS L ++ + +G
Sbjct: 887 ASLPDRIGELKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASLPDRIG 942



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP+SI  LS  +  NL  C++L SLP  I+ L+SL  +    CSKL ++  ++ K++ L 
Sbjct: 600 LPSSIGCLSQLVRLNLSSCESLASLPDNIDELKSLVELDLYSCSKLASLPNSICKLKCL- 658

Query: 804 VRLSSWNRPKMQNDFDCVEQSAVETVTKLA 833
            +L+  + P    +   +E+  + + +KLA
Sbjct: 659 TKLNLASLPDSIGELRSLEELDLSSCSKLA 688


>gi|296090595|emb|CBI40964.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 134/524 (25%), Positives = 224/524 (42%), Gaps = 126/524 (24%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L G T++ +V  S+  L+ L LL ++ C NL  LP +I  L  LRT  LSGCSK
Sbjct: 85  NLEVLVLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLP-SIRWLVSLRTFILSGCSK 143

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+K  ++   M  LSKL LDGT+I +                                  
Sbjct: 144 LEKLQEVPQHMPYLSKLCLDGTAITD---------------------------------- 169

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
                 SG  +L N  +  G ++ L EL+   + IR+  SS  +++N         N  P
Sbjct: 170 -----FSGWSELGNFQENSGNLDCLSELNSDDSTIRQQHSSSVVLRNH--------NASP 216

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           +SA                        ++  C+LT                      SL 
Sbjct: 217 SSAPRRSRF------------------ISPHCTLT----------------------SLT 236

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL--- 301
            L L+  + + LP ++  L  L+ LEL +C+RLQ+LP +P +++ + A+ C+SL  +   
Sbjct: 237 YLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIECMNASNCTSLELISPQ 296

Query: 302 -----FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL--SIVF 354
                FG   L  + + + NC   ++   ++  + ++   + +  A+  P   +  S VF
Sbjct: 297 SVFKRFGGF-LFGNCFKLRNCHSKMEHDVQSVASHAVPGTWRDTYAIWHPNVAIPFSTVF 355

Query: 355 PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY-LFHSYPAH 413
           PGS+IP WF + ++G  I +  P   Y  +  +GFA+  V   P+H +  + ++     H
Sbjct: 356 PGSEIPDWFRHHSQGHEINIEVPPDWYINSNFLGFALSAV-MAPQHDSRAWCMYCDLDTH 414

Query: 414 ELE--------CSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSF 465
           +L         CS  GS       ++ +   + SDH+WL ++P      + + + I+ SF
Sbjct: 415 DLNSNSNSHRICSFFGSWT-----YQLQRTPIESDHVWLAYVPSFFSFSREKWSHIKFSF 469

Query: 466 RSISDPTWKVKRCGFHPIYMHEVEE---------FDETTKQSTR 500
            S       VK CGF P+Y+    +         FDE  + + +
Sbjct: 470 SSSGGCV--VKSCGFCPVYIKGTSDEGDYSSGIAFDEPRRHAAK 511



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)

Query: 661 VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE 720
           V VL   T++R++  ++  L  L+ L +  C NLE LP +I  L  L T  LSG SK  +
Sbjct: 88  VLVLKGCTNLRKVHPSLGYLSKLILLNMENCINLEHLP-SIRWLVSLRTFILSGCSKLEK 146

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             E+      L ++ L+GTAI       EL  GN   N  +   L  L S  + +R
Sbjct: 147 LQEVPQHMPYLSKLCLDGTAITDFSGWSEL--GNFQENSGNLDCLSELNSDDSTIR 200



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++  L+ L L GTSI  +P ++E L+ L+ L L  C+ L +LPV  SS++C+     S C
Sbjct: 231 TLTSLTYLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIECMNA---SNC 287

Query: 63  SKLK 66
           + L+
Sbjct: 288 TSLE 291



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           +L +L +      +L  +++S     ++ P+ + + +  + +    T +R +  S+  LS
Sbjct: 49  HLTQLWKGQKVFGHLEFVDVSYSQYLKKTPDFSRATNLEVLVLKGCTNLRKVHPSLGYLS 108

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
             IL N+++C NL+ LPS I  L SLR    SGCSKL+ + E 
Sbjct: 109 KLILLNMENCINLEHLPS-IRWLVSLRTFILSGCSKLEKLQEV 150



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 65/141 (46%), Gaps = 10/141 (7%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTI----SSLKCLRTLE 58
           M  LS L LDGT+IT+     EL    E      C   L+S   TI    SS   LR   
Sbjct: 154 MPYLSKLCLDGTAITDFSGWSELGNFQENSGNLDCLSELNSDDSTIRQQHSSSVVLRNHN 213

Query: 59  LSGCS--KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            S  S  +  +F     ++  L+ L L GTSI  +P ++E L  L+ L L  C+ L  LP
Sbjct: 214 ASPSSAPRRSRFISPHCTLTSLTYLNLSGTSIIHLPWNLERLSMLKRLELTNCRRLQALP 273

Query: 117 SSINGLKSLKTLNLSGCCKLE 137
              +   S++ +N S C  LE
Sbjct: 274 VLPS---SIECMNASNCTSLE 291


>gi|357452805|ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1406

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 230/512 (44%), Gaps = 90/512 (17%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVT---ISSLKCLRTLELSGCSKLKKFPQIV 72
            +++ V  SI LL  L  L+L+GC+NL SL +     S+L  L+ L LSGCSKL       
Sbjct: 910  NLSYVHPSIGLLKELAFLSLEGCRNLVSLVLDGHPASNLYSLKVLHLSGCSKL------- 962

Query: 73   ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
                             E+ S    +  LE L +++C +L  +  SI  L  LK L+   
Sbjct: 963  -----------------EIVSDFRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRE 1005

Query: 133  CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
            C  L ++P+++  + SLE LD+ G          F +++L  L  +  +E     S    
Sbjct: 1006 CTSLASIPESINSMTSLETLDLCGC---------FKLESLPLLGNTSVSEINVDLS---- 1052

Query: 193  LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                            L S   + SL  LDLS C L  + +P+ I  L  L+ L L  NN
Sbjct: 1053 -------------NDELISSYYMNSLIFLDLSFCNL--SRVPNAIGELRHLERLNLEGNN 1097

Query: 253  FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKY 312
             ++LP+S+ GL +L  L L  C RLQSLP++   L    + G      + G+    RS  
Sbjct: 1098 LISLPSSVGGLSSLAYLNLAHCSRLQSLPEL--QLCATSSYGGRYFKMVSGSHN-HRSGL 1154

Query: 313  TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH---KLSIVFPGSQIPKWFMYQNEG 369
             I NC      L+  G ++ +   +L+   V +P H    L IV P   IP WF +Q  G
Sbjct: 1155 YIFNCPH----LKMTGQSLDLAVLWLK-NLVKNPCHFRCGLDIVVPSDTIPLWFDHQFAG 1209

Query: 370  SS-ITVTRPSYLYN-VNKVVGFAICCVF------QVPKHSTGTY-LFHSYPAHELECSMD 420
            +S + +T     YN  +  +GFA C  F        P  S   Y L+ S+ + + E + D
Sbjct: 1210 NSRVKITD----YNKFDNWLGFAFCVAFVENCCPSTPASSQLPYPLYLSFESEQTEETFD 1265

Query: 421  GSGEGHYIYFRGKFGHVVSDHLWLLFLPR-HGHNWQFESNLIRLSFRSISDPTWKVKRCG 479
               +   I   G      ++++WL+++ R H H   F +   +++F+  + P  ++K  G
Sbjct: 1266 IPIQLDLINVDGS----NAEYIWLIYISRPHCH---FVTTGAQITFK--AHPGLELKTWG 1316

Query: 480  FHPIYMHEV-EEFDETTKQSTRFTSCNLNEVH 510
             H ++ H++   F+  T +  +     L+ VH
Sbjct: 1317 LHMVFEHDIYSSFELNTNEVHQNDYIQLDHVH 1348



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 95/164 (57%), Gaps = 24/164 (14%)

Query: 1    MASMKDLSDL-YLD---GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRT 56
            ++  + +S+L YLD     S++ +  SI  LT L+ L+ + C +L+S+P +I+S+  L T
Sbjct: 965  VSDFRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSMTSLET 1024

Query: 57   LELSGCSKLKKFP-----------------QIVASMEDLSKLYLDGT--SIAEVPSSIEL 97
            L+L GC KL+  P                 ++++S    S ++LD +  +++ VP++I  
Sbjct: 1025 LDLCGCFKLESLPLLGNTSVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSRVPNAIGE 1084

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            L  LE L L E  NL+ LPSS+ GL SL  LNL+ C +L+++P+
Sbjct: 1085 LRHLERLNL-EGNNLISLPSSVGGLSSLAYLNLAHCSRLQSLPE 1127



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 676  AIELLFGLVQLTLNGCKNLERL---PRTISALKYLSTLNLSGLSKFREFPEITS-SRDQL 731
            +I LL  L  L+L GC+NL  L       S L  L  L+LSG SK     +    S  + 
Sbjct: 917  SIGLLKELAFLSLEGCRNLVSLVLDGHPASNLYSLKVLHLSGCSKLEIVSDFRGVSNLEY 976

Query: 732  LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            L+I  +  ++  +  SI  L+     + ++C +L S+P +IN + SL  +   GC KL++
Sbjct: 977  LDID-QCVSLSTINQSIGDLTQLKFLSFRECTSLASIPESINSMTSLETLDLCGCFKLES 1035

Query: 792  V 792
            +
Sbjct: 1036 L 1036



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 24/158 (15%)

Query: 656  EFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            E+ DI Q +S  T  + +    +L F    L+   C +L  +P +I+++  L TL+L G 
Sbjct: 975  EYLDIDQCVSLSTINQSIGDLTQLKF----LSFRECTSLASIPESINSMTSLETLDLCGC 1030

Query: 716  SKFREFP----------EITSSRDQLLEIHLEGTAI---------RGLPASIELLSGNIL 756
             K    P           +  S D+L+  +   + I           +P +I  L     
Sbjct: 1031 FKLESLPLLGNTSVSEINVDLSNDELISSYYMNSLIFLDLSFCNLSRVPNAIGELRHLER 1090

Query: 757  SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             NL+   NL SLPS++ GL SL  +  + CS+L+++ E
Sbjct: 1091 LNLEG-NNLISLPSSVGGLSSLAYLNLAHCSRLQSLPE 1127


>gi|30692996|ref|NP_198509.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006745|gb|AED94128.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 177/377 (46%), Gaps = 39/377 (10%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELL-PGLELLYLNECKN 111
           ++ L+LS    L++ P   +   ++ KL L +  S+  V  SI +L   L LL L+ C  
Sbjct: 622 VKYLDLSHSVYLRETPDF-SYFPNVEKLILINCKSLVLVHKSIGILDKKLVLLNLSSCIE 680

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LP  I  LKSL++L LS C KLE + D LG++ESL  L    TA+R   S+I  +K 
Sbjct: 681 LDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKK 740

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGE 230
           L+ L  +GC    +          NL  + S  V+L+ P SL+G+  +  L L  C L +
Sbjct: 741 LKRLSLNGCKGLLSDDI------DNLYSEKSHSVSLLRPVSLSGLTYMRILSLGYCNLSD 794

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
             IP DI +L  L++L L  N+F  LP   + L NL EL L DC +LQS+  +P +L F+
Sbjct: 795 ELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLPRSLLFL 854

Query: 291 RANGCSSL--------------------VTLFGALKLCRSKYTIINCIDSLKLLRKNGLA 330
               C  L                    ++LF    +   +Y     +D  KL   +   
Sbjct: 855 DVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLASTDTTI 914

Query: 331 ISMLREYLEL--QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVG 388
            +ML  +L+   + +  P  + ++      IP W  ++ E  S ++T P    N + VVG
Sbjct: 915 NTMLENWLKRNHECIYIPVDRPNV------IPNWVYFEEEKRSFSITVPE-TDNSDTVVG 967

Query: 389 FAICCVFQVPKHSTGTY 405
           F +   F  P   +  Y
Sbjct: 968 FTLWMNFVCPMGYSSIY 984



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 23/231 (9%)

Query: 16  SITEVPSSIELL-TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           S+  V  SI +L   L LL L  C  L  LP  I  LK L +L LS CSKL++    +  
Sbjct: 655 SLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGE 714

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-----------------LPS 117
           +E L+ L  D T++ E+PS+I  L  L+ L LN CK L+                   P 
Sbjct: 715 LESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPV 774

Query: 118 SINGLKSLKTLNLSGCCKL--ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           S++GL  ++ L+L G C L  E +P+ +G +  L +LD+ G +     +    + NL  L
Sbjct: 775 SLSGLTYMRILSL-GYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGEL 833

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
             S C++  +  S    L F  +GK  C +    P ++   +L KL L+DC
Sbjct: 834 LLSDCSKLQSILSLPRSLLFLDVGK--CIMLKRTPDISKCSALFKLQLNDC 882



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 21/159 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L+ L  D T++ E+PS+I  L  L+ L+L GCK L S                 
Sbjct: 712 LGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLL 771

Query: 44  LPVTISSLKCLRTLELSGCSKLKKF-PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
            PV++S L  +R L L  C+   +  P+ + S+  L  L L G S   +P+    LP L 
Sbjct: 772 RPVSLSGLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLG 831

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            L L++C    +L S ++  +SL  L++  C  L+  PD
Sbjct: 832 ELLLSDCS---KLQSILSLPRSLLFLDVGKCIMLKRTPD 867



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 70/245 (28%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLS--DGTD-IRELSLAIEL------ 679
           +  GRQ VR  SP++ G  SRLW   D    +V VL    GT+ I  LSL  ++      
Sbjct: 487 RDMGRQIVREISPKKCGERSRLWSHND----VVGVLKKKSGTNAIEGLSLKADVMDFQYF 542

Query: 680 ------------LFGLVQLTLNGCKNLERLPRTIS----------------ALKYLSTLN 711
                       L  L  + LNG  + E  P+ +                 +L+ L+ L+
Sbjct: 543 EVEAFAKMQELRLLELRYVDLNG--SYEHFPKDLRWLCWHGFSLECFPINLSLESLAALD 600

Query: 712 L--SGLSKF------------------------REFPEITSSRDQLLEIHLEGTAIRGLP 745
           L  S L +F                        RE P+ +   +    I +   ++  + 
Sbjct: 601 LQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVH 660

Query: 746 ASIELLSGN-ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            SI +L    +L NL  C  L  LP  I  L+SL  ++ S CSKL+ + + LG++ESL  
Sbjct: 661 KSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTT 720

Query: 805 RLSSW 809
            L+ +
Sbjct: 721 LLADF 725



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 28/172 (16%)

Query: 646 NCSRLWEEAD---EFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL-------- 694
           NCS+L    D   E   +  +L+D T +RE+   I  L  L +L+LNGCK L        
Sbjct: 701 NCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNL 760

Query: 695 --ER-------LPRTISALKYLSTLNLSGLSKFREF-PEITSSRDQLLEIHLEGTAIRGL 744
             E+        P ++S L Y+  L+L   +   E  PE   S   L ++ L G +   L
Sbjct: 761 YSEKSHSVSLLRPVSLSGLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNL 820

Query: 745 PASIELLS--GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           P     L   G +L  L DC  L+S+ S     RSL  +    C  LK   +
Sbjct: 821 PTDFATLPNLGELL--LSDCSKLQSILSLP---RSLLFLDVGKCIMLKRTPD 867



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L L+ C  L+ LP  I  LK L +L LS  SK     +     + L  +  + TA+R
Sbjct: 670 LVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALR 729

Query: 743 GLPASIELLSGNILSNLKDCKNLKS 767
            +P++I  L      +L  CK L S
Sbjct: 730 EIPSTINQLKKLKRLSLNGCKGLLS 754


>gi|186527047|ref|NP_001119319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006746|gb|AED94129.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1191

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 177/377 (46%), Gaps = 39/377 (10%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELL-PGLELLYLNECKN 111
           ++ L+LS    L++ P   +   ++ KL L +  S+  V  SI +L   L LL L+ C  
Sbjct: 625 VKYLDLSHSVYLRETPDF-SYFPNVEKLILINCKSLVLVHKSIGILDKKLVLLNLSSCIE 683

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LP  I  LKSL++L LS C KLE + D LG++ESL  L    TA+R   S+I  +K 
Sbjct: 684 LDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKK 743

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGE 230
           L+ L  +GC    +          NL  + S  V+L+ P SL+G+  +  L L  C L +
Sbjct: 744 LKRLSLNGCKGLLSDDI------DNLYSEKSHSVSLLRPVSLSGLTYMRILSLGYCNLSD 797

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
             IP DI +L  L++L L  N+F  LP   + L NL EL L DC +LQS+  +P +L F+
Sbjct: 798 ELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLPRSLLFL 857

Query: 291 RANGCSSL--------------------VTLFGALKLCRSKYTIINCIDSLKLLRKNGLA 330
               C  L                    ++LF    +   +Y     +D  KL   +   
Sbjct: 858 DVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLASTDTTI 917

Query: 331 ISMLREYLEL--QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVG 388
            +ML  +L+   + +  P  + ++      IP W  ++ E  S ++T P    N + VVG
Sbjct: 918 NTMLENWLKRNHECIYIPVDRPNV------IPNWVYFEEEKRSFSITVPE-TDNSDTVVG 970

Query: 389 FAICCVFQVPKHSTGTY 405
           F +   F  P   +  Y
Sbjct: 971 FTLWMNFVCPMGYSSIY 987



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 23/231 (9%)

Query: 16  SITEVPSSIELL-TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           S+  V  SI +L   L LL L  C  L  LP  I  LK L +L LS CSKL++    +  
Sbjct: 658 SLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGE 717

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-----------------LPS 117
           +E L+ L  D T++ E+PS+I  L  L+ L LN CK L+                   P 
Sbjct: 718 LESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPV 777

Query: 118 SINGLKSLKTLNLSGCCKL--ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           S++GL  ++ L+L G C L  E +P+ +G +  L +LD+ G +     +    + NL  L
Sbjct: 778 SLSGLTYMRILSL-GYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGEL 836

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
             S C++  +  S    L F  +GK  C +    P ++   +L KL L+DC
Sbjct: 837 LLSDCSKLQSILSLPRSLLFLDVGK--CIMLKRTPDISKCSALFKLQLNDC 885



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 21/159 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L+ L  D T++ E+PS+I  L  L+ L+L GCK L S                 
Sbjct: 715 LGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLL 774

Query: 44  LPVTISSLKCLRTLELSGCSKLKKF-PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
            PV++S L  +R L L  C+   +  P+ + S+  L  L L G S   +P+    LP L 
Sbjct: 775 RPVSLSGLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLG 834

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            L L++C    +L S ++  +SL  L++  C  L+  PD
Sbjct: 835 ELLLSDCS---KLQSILSLPRSLLFLDVGKCIMLKRTPD 870



 Score = 46.2 bits (108), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 70/245 (28%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLS--DGTD-IRELSLAIEL------ 679
           +  GRQ VR  SP++ G  SRLW   D    +V VL    GT+ I  LSL  ++      
Sbjct: 490 RDMGRQIVREISPKKCGERSRLWSHND----VVGVLKKKSGTNAIEGLSLKADVMDFQYF 545

Query: 680 ------------LFGLVQLTLNGCKNLERLPRTIS----------------ALKYLSTLN 711
                       L  L  + LNG  + E  P+ +                 +L+ L+ L+
Sbjct: 546 EVEAFAKMQELRLLELRYVDLNG--SYEHFPKDLRWLCWHGFSLECFPINLSLESLAALD 603

Query: 712 L--SGLSKF------------------------REFPEITSSRDQLLEIHLEGTAIRGLP 745
           L  S L +F                        RE P+ +   +    I +   ++  + 
Sbjct: 604 LQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVH 663

Query: 746 ASIELLSGN-ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            SI +L    +L NL  C  L  LP  I  L+SL  ++ S CSKL+ + + LG++ESL  
Sbjct: 664 KSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTT 723

Query: 805 RLSSW 809
            L+ +
Sbjct: 724 LLADF 728



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 28/172 (16%)

Query: 646 NCSRLWEEAD---EFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL-------- 694
           NCS+L    D   E   +  +L+D T +RE+   I  L  L +L+LNGCK L        
Sbjct: 704 NCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNL 763

Query: 695 --ER-------LPRTISALKYLSTLNLSGLSKFREF-PEITSSRDQLLEIHLEGTAIRGL 744
             E+        P ++S L Y+  L+L   +   E  PE   S   L ++ L G +   L
Sbjct: 764 YSEKSHSVSLLRPVSLSGLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNL 823

Query: 745 PASIELLS--GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           P     L   G +L  L DC  L+S+ S     RSL  +    C  LK   +
Sbjct: 824 PTDFATLPNLGELL--LSDCSKLQSILSLP---RSLLFLDVGKCIMLKRTPD 870



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L L+ C  L+ LP  I  LK L +L LS  SK     +     + L  +  + TA+R
Sbjct: 673 LVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALR 732

Query: 743 GLPASIELLSGNILSNLKDCKNLKS 767
            +P++I  L      +L  CK L S
Sbjct: 733 EIPSTINQLKKLKRLSLNGCKGLLS 757


>gi|356545122|ref|XP_003540994.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1045

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 179/399 (44%), Gaps = 52/399 (13%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  LY D      +PSS      +EL+      N+  L      L  L+ L+LS    L
Sbjct: 587 ELRYLYWDNYPFLSMPSSFHPDQLVELIL--PYSNIKQLWKDTKHLPNLKDLDLSHSQNL 644

Query: 66  KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            + P + + +  L  L L G T I  +  SI  L  L+ L L  C NL    + I GL S
Sbjct: 645 IEMPDL-SGVPHLRNLNLQGCTKIVRIDPSIGTLRELDSLNLRNCINLFLNLNIIFGLSS 703

Query: 125 LKTLNLSGCCKL--ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           L  LNLSGC KL    +     + E +E++D + ++I+  TSS++ M  L    FS    
Sbjct: 704 LTVLNLSGCSKLLTNRLLQKPRETEHMEKIDENRSSIQLSTSSVYEMLMLPFYIFS---- 759

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                SW          K    + L++P L+    L  LDLS C L    IP  I NLHS
Sbjct: 760 -----SW----------KQVDSLGLLVPYLSRFPRLFVLDLSFCNL--LQIPDAIGNLHS 802

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
           L  L L  N FV LP +I  L  L  L LE CK+L+ LP++P   +  R N        +
Sbjct: 803 LVILNLGGNKFVILPNTIKQLSELRSLNLEHCKQLKYLPELPTPKK--RKNH-----KYY 855

Query: 303 GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKW 362
           G L          NC         N   + ++   +  Q+ S   ++L IV PG++IP+W
Sbjct: 856 GGL-------NTFNC--------PNLSEMELIYRMVHWQS-SLSFNRLDIVIPGTEIPRW 899

Query: 363 FMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS 401
           F  QNEG SI++  PS L      +G A CC   V  H 
Sbjct: 900 FSKQNEGDSISMD-PSPLMEDPNWIGVA-CCALLVAHHD 936



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 30/195 (15%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL--------------- 673
           K+ G+  VR ++P++P   SRLW    ++ D+ +V+ +  + + L               
Sbjct: 497 KELGKIIVREKAPKQPRKWSRLW----DYKDLQKVMIENKEAKNLEAICICNEKYQDEFL 552

Query: 674 --SLAIELLFGLVQLTLNGCKNLER---LPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
             ++ ++ L  ++ L L   KN+     L    + L+YL   N   LS    F       
Sbjct: 553 QQTMKVDALSKMIHLKLLMLKNVNFSGILNYLSNELRYLYWDNYPFLSMPSSF-----HP 607

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           DQL+E+ L  + I+ L    + L      +L   +NL  +P  ++G+  LR +   GC+K
Sbjct: 608 DQLVELILPYSNIKQLWKDTKHLPNLKDLDLSHSQNLIEMPD-LSGVPHLRNLNLQGCTK 666

Query: 789 LKNVTETLGKVESLE 803
           +  +  ++G +  L+
Sbjct: 667 IVRIDPSIGTLRELD 681


>gi|10178211|dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana]
          Length = 1130

 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 177/377 (46%), Gaps = 39/377 (10%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELL-PGLELLYLNECKN 111
           ++ L+LS    L++ P   +   ++ KL L +  S+  V  SI +L   L LL L+ C  
Sbjct: 627 VKYLDLSHSVYLRETPDF-SYFPNVEKLILINCKSLVLVHKSIGILDKKLVLLNLSSCIE 685

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LP  I  LKSL++L LS C KLE + D LG++ESL  L    TA+R   S+I  +K 
Sbjct: 686 LDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKK 745

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGE 230
           L+ L  +GC    +          NL  + S  V+L+ P SL+G+  +  L L  C L +
Sbjct: 746 LKRLSLNGCKGLLSDDI------DNLYSEKSHSVSLLRPVSLSGLTYMRILSLGYCNLSD 799

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
             IP DI +L  L++L L  N+F  LP   + L NL EL L DC +LQS+  +P +L F+
Sbjct: 800 ELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLPRSLLFL 859

Query: 291 RANGCSSL--------------------VTLFGALKLCRSKYTIINCIDSLKLLRKNGLA 330
               C  L                    ++LF    +   +Y     +D  KL   +   
Sbjct: 860 DVGKCIMLKRTPDISKCSALFKLQLNDCISLFEIPGIHNHEYLSFIVLDGCKLASTDTTI 919

Query: 331 ISMLREYLEL--QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVG 388
            +ML  +L+   + +  P  + ++      IP W  ++ E  S ++T P    N + VVG
Sbjct: 920 NTMLENWLKRNHECIYIPVDRPNV------IPNWVYFEEEKRSFSITVPE-TDNSDTVVG 972

Query: 389 FAICCVFQVPKHSTGTY 405
           F +   F  P   +  Y
Sbjct: 973 FTLWMNFVCPMGYSSIY 989



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 23/231 (9%)

Query: 16  SITEVPSSIELL-TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           S+  V  SI +L   L LL L  C  L  LP  I  LK L +L LS CSKL++    +  
Sbjct: 660 SLVLVHKSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGE 719

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-----------------LPS 117
           +E L+ L  D T++ E+PS+I  L  L+ L LN CK L+                   P 
Sbjct: 720 LESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPV 779

Query: 118 SINGLKSLKTLNLSGCCKL--ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           S++GL  ++ L+L G C L  E +P+ +G +  L +LD+ G +     +    + NL  L
Sbjct: 780 SLSGLTYMRILSL-GYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGEL 838

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
             S C++  +  S    L F  +GK  C +    P ++   +L KL L+DC
Sbjct: 839 LLSDCSKLQSILSLPRSLLFLDVGK--CIMLKRTPDISKCSALFKLQLNDC 887



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 21/159 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           +  ++ L+ L  D T++ E+PS+I  L  L+ L+L GCK L S                 
Sbjct: 717 LGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLL 776

Query: 44  LPVTISSLKCLRTLELSGCSKLKKF-PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
            PV++S L  +R L L  C+   +  P+ + S+  L  L L G S   +P+    LP L 
Sbjct: 777 RPVSLSGLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLG 836

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            L L++C    +L S ++  +SL  L++  C  L+  PD
Sbjct: 837 ELLLSDCS---KLQSILSLPRSLLFLDVGKCIMLKRTPD 872



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 70/245 (28%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLS--DGTD-IRELSLAIEL------ 679
           +  GRQ VR  SP++ G  SRLW   D    +V VL    GT+ I  LSL  ++      
Sbjct: 492 RDMGRQIVREISPKKCGERSRLWSHND----VVGVLKKKSGTNAIEGLSLKADVMDFQYF 547

Query: 680 ------------LFGLVQLTLNGCKNLERLPRTIS----------------ALKYLSTLN 711
                       L  L  + LNG  + E  P+ +                 +L+ L+ L+
Sbjct: 548 EVEAFAKMQELRLLELRYVDLNG--SYEHFPKDLRWLCWHGFSLECFPINLSLESLAALD 605

Query: 712 L--SGLSKF------------------------REFPEITSSRDQLLEIHLEGTAIRGLP 745
           L  S L +F                        RE P+ +   +    I +   ++  + 
Sbjct: 606 LQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVH 665

Query: 746 ASIELLSGN-ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            SI +L    +L NL  C  L  LP  I  L+SL  ++ S CSKL+ + + LG++ESL  
Sbjct: 666 KSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTT 725

Query: 805 RLSSW 809
            L+ +
Sbjct: 726 LLADF 730



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 28/172 (16%)

Query: 646 NCSRLWEEAD---EFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL-------- 694
           NCS+L    D   E   +  +L+D T +RE+   I  L  L +L+LNGCK L        
Sbjct: 706 NCSKLERLDDALGELESLTTLLADFTALREIPSTINQLKKLKRLSLNGCKGLLSDDIDNL 765

Query: 695 --ER-------LPRTISALKYLSTLNLSGLSKFREF-PEITSSRDQLLEIHLEGTAIRGL 744
             E+        P ++S L Y+  L+L   +   E  PE   S   L ++ L G +   L
Sbjct: 766 YSEKSHSVSLLRPVSLSGLTYMRILSLGYCNLSDELIPEDIGSLSFLRDLDLRGNSFCNL 825

Query: 745 PASIELLS--GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           P     L   G +L  L DC  L+S+ S     RSL  +    C  LK   +
Sbjct: 826 PTDFATLPNLGELL--LSDCSKLQSILSLP---RSLLFLDVGKCIMLKRTPD 872



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 41/85 (48%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L L+ C  L+ LP  I  LK L +L LS  SK     +     + L  +  + TA+R
Sbjct: 675 LVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALR 734

Query: 743 GLPASIELLSGNILSNLKDCKNLKS 767
            +P++I  L      +L  CK L S
Sbjct: 735 EIPSTINQLKKLKRLSLNGCKGLLS 759


>gi|105922395|gb|ABF81414.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1282

 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 117/204 (57%), Gaps = 7/204 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G TS++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 718 FTGIPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLE-MESLKVCIL 776

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M  L  L LDGT I E+ SSI  L GLE+L +  CKNL  +PSSI
Sbjct: 777 DGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSI 836

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+L GC + EN+P+ LGKVESLEE D  G +  RP   I +  N    +F  
Sbjct: 837 GCLKSLKKLDLFGCSEFENIPENLGKVESLEEFD--GLSNPRPGFGIAIPGNEIPGWF-- 892

Query: 180 CNEPPASASWHLHLPFNLLGKSSC 203
            N     +S  + +P   +G  +C
Sbjct: 893 -NHQSMGSSISVQVPSWSMGFVAC 915



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 162/401 (40%), Gaps = 83/401 (20%)

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLE 150
           +P+ +++   +EL   N   NL +L        +LK +NLS    L   PD  G      
Sbjct: 669 LPAGLQVDELVELHMAN--SNLDQLWYGCKSAFNLKVINLSNSLHLTKTPDFTG------ 720

Query: 151 ELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHLPF-NLLGKSSCPVA 206
                             + NL SL   GC   +E   S  +H  L + NL+    C   
Sbjct: 721 ------------------IPNLESLILEGCTSLSEVHPSLGYHKKLQYVNLM---DCESV 759

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            +LPS   + SL    L  C   E   P  + N++ L  L L+      L +SI  L+ L
Sbjct: 760 RILPSNLEMESLKVCILDGCSKLEK-FPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGL 818

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
           E L ++ CK L+S+P                  +  G LK  + K  +  C    + + +
Sbjct: 819 EVLSMKTCKNLKSIP------------------SSIGCLKSLK-KLDLFGC-SEFENIPE 858

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKV 386
           N   +  L E+     +S+P     I  PG++IP WF +Q+ GSSI+V  PS+       
Sbjct: 859 NLGKVESLEEF---DGLSNPRPGFGIAIPGNEIPGWFNHQSMGSSISVQVPSW------S 909

Query: 387 VGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY---IYFRGKFGHVVSDHLW 443
           +GF  C  F     S   +           C    +G  +Y   +     +  V+SDH+W
Sbjct: 910 MGFVACVAFSANGESPSLF-----------CHFKANGRENYPSPMCISCNYIQVLSDHIW 958

Query: 444 LLFLP----RHGHNWQFES-NLIRLSFRSISDPTWKVKRCG 479
           L +L     +    W+ ES + I LSF S   P  KVK CG
Sbjct: 959 LFYLSFDHLKELKEWKHESYSNIELSFHSFQ-PGVKVKNCG 998



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++  ++ +G T + E+  ++     L  + L  C+++  LP  +  ++ L    L G S
Sbjct: 722 PNLESLILEGCTSLSEVHPSLGYHKKLQYVNLMDCESVRILPSNLE-MESLKVCILDGCS 780

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FP+I  + + L+ + L+GT I  L +SI  L G  + ++K CKNLKS+PS+I  L+
Sbjct: 781 KLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCLK 840

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +   GCS+ +N+ E LGKVESLE
Sbjct: 841 SLKKLDLFGCSEFENIPENLGKVESLE 867



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       DGT I ELS +I  L GL  L++  CKNL+ +P 
Sbjct: 779 CSKL----EKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPS 834

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  LK L  L+L G S+F   PE
Sbjct: 835 SIGCLKSLKKLDLFGCSEFENIPE 858



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F      + G 
Sbjct: 572 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----FDMPGI 619

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +   +  S +  L  L +  + +  E PE  S++                    D+L
Sbjct: 620 KEAQWNMKAFSKMSRLRLLKIDNV-QLSEGPENLSNKLLFLEWHSYPSKSLPAGLQVDEL 678

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  + +  L    +      + NL +  +L   P    G+ +L  +   GC+ L  
Sbjct: 679 VELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPD-FTGIPNLESLILEGCTSLSE 737

Query: 792 VTETLGKVESLE 803
           V  +LG  + L+
Sbjct: 738 VHPSLGYHKKLQ 749


>gi|105922664|gb|ABF81429.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1107

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 118/204 (57%), Gaps = 7/204 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L +L L+G TS++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 661 FTGIPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLE-MESLKVFTL 719

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL++FP IV +M  L  L LDGT IAE+ SSI  L GL LL +  CKNL  +PSSI
Sbjct: 720 DGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSI 779

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LS C  L+N+P+ LGKVESLEE D  G +  RP   I +  N    +F  
Sbjct: 780 GCLKSLKKLDLSCCSALKNIPENLGKVESLEEFD--GFSNPRPGFGIAVPGNEIPGWF-- 835

Query: 180 CNEPPASASWHLHLPFNLLGKSSC 203
            N     +S  + +P   +G  +C
Sbjct: 836 -NHRSKGSSISVQVPSGRMGFFAC 858



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 166/415 (40%), Gaps = 102/415 (24%)

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           +++L +L++  +SI ++    +    L+++ L+   NL++ P    G+ +L+ L L GC 
Sbjct: 618 VDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPD-FTGIPNLENLILEGCT 676

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L  V  +L + + L+ +++                                    +H  
Sbjct: 677 SLSEVHPSLARHKKLQHVNL------------------------------------VH-- 698

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                   C    +LPS   + SL    L  C   E   P  + N++ L  L L+     
Sbjct: 699 --------CQSIRILPSNLEMESLKVFTLDGCSKLER-FPDIVGNMNCLMVLRLDGTGIA 749

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI 314
            L +SI  L+ L  L + +CK L+S+P          + GC           L   K   
Sbjct: 750 ELSSSIRHLIGLGLLSMTNCKNLESIPS---------SIGC-----------LKSLKKLD 789

Query: 315 INCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
           ++C  +LK + +N   +  L E+      S+P     I  PG++IP WF ++++GSSI+V
Sbjct: 790 LSCCSALKNIPENLGKVESLEEF---DGFSNPRPGFGIAVPGNEIPGWFNHRSKGSSISV 846

Query: 375 TRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY-----IY 429
             PS        +GF  C  F     S   +           C    +G  +Y     I 
Sbjct: 847 QVPS------GRMGFFACVAFNANDESPSLF-----------CHFKANGRENYPSPMCIN 889

Query: 430 FRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSISDPTWKVKRCG 479
           F    GH+ SDH+WL +L     +    WQ ES + I LSF S      KV  CG
Sbjct: 890 FE---GHLFSDHIWLFYLSFDYLKELQEWQHESFSNIELSFHSYEQGV-KVNNCG 940



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++  ++ +G T + E+  ++     L  + L  C+++  LP  +  ++ L    L G S
Sbjct: 665 PNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNLE-MESLKVFTLDGCS 723

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K   FP+I  + + L+ + L+GT I  L +SI  L G  L ++ +CKNL+S+PS+I  L+
Sbjct: 724 KLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPSSIGCLK 783

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  S CS LKN+ E LGKVESLE
Sbjct: 784 SLKKLDLSCCSALKNIPENLGKVESLE 810



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    + FPDIV  ++       DGT I ELS +I  L GL  L++  CKNLE +P 
Sbjct: 722 CSKL----ERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIPS 777

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  LK L  L+LS  S  +  PE
Sbjct: 778 SIGCLKSLKKLDLSCCSALKNIPE 801


>gi|10121909|gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 193/412 (46%), Gaps = 59/412 (14%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG----- 61
            L DLYLD T++  +PSSI  L  L+ L L  C +LS++P TI+ L  L+ L ++G     
Sbjct: 1021 LEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEE 1080

Query: 62   ------------------CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
                              C  LK+ P  +  +  L +L LD T I  +P  I  L  +  
Sbjct: 1081 LPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHFIRQ 1140

Query: 104  LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRP 162
            L L  CK+L  LP +I  + +L +LNL G   +E +P+  GK+E+L EL ++    ++R 
Sbjct: 1141 LDLRNCKSLKALPKTIGKMDTLYSLNLVG-SNIEELPEEFGKLENLVELRMNNCKMLKRL 1199

Query: 163  TSSIFLMKNLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVA 206
              S   +K+L  LY       E P S            L  P       N+ G S  P  
Sbjct: 1200 PKSFGDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRF 1259

Query: 207  LMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            + +P S + +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L N
Sbjct: 1260 VEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSN 1318

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
            L+EL L DC+ L+ LP +P  L+ +    C SL ++    +L  +  T +N  +  K++ 
Sbjct: 1319 LQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL--TILTDLNLTNCAKVVD 1376

Query: 326  KNGLA--ISMLREYLE----------LQAVSDPGHKL--SIVFPGSQIPKWF 363
              GL    ++ R Y+            + +S    K+  ++  PG+++P WF
Sbjct: 1377 IPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF 1428



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 142/293 (48%), Gaps = 31/293 (10%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + +VP S+  L  L  L L+ C +LS     +S LKCL    LSGCS L   P+ + SM 
Sbjct: 913  LVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMP 972

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
             L +L LDGT+I+ +P SI  L  LE L L  C++                       L 
Sbjct: 973  CLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTALR 1032

Query: 114  RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR---PTSSIFLMK 170
             LPSSI  LK+L+ L+L  C  L  +P+T+ K+ SL+EL ++G+A+      T S+  + 
Sbjct: 1033 NLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSLLCLT 1092

Query: 171  NLRSLYFSGCNEPPAS-ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
            +L +       + P+S    +  L   L    S P+  +   +  +  + +LDL +C   
Sbjct: 1093 DLSAGDCKFLKQVPSSIGGLNSLLQLQL---DSTPIEALPEEIGDLHFIRQLDLRNCK-S 1148

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
              A+P  I  + +L  L L  +N   LP     L NL EL + +CK L+ LP+
Sbjct: 1149 LKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLKRLPK 1201



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 50/205 (24%)

Query: 646  NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER--------- 696
            N S L E     P + ++L DGT I  L  +I  L  L +L+L GC+++E          
Sbjct: 960  NLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLT 1019

Query: 697  --------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                          LP +I  LK L  L+L   +     PE  +    L E+ + G+A+ 
Sbjct: 1020 SLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVE 1079

Query: 743  GLPASIELLSGNILSNLK--DCKNLKSLPSTINGLRSL---------------------- 778
             LP  IE  S   L++L   DCK LK +PS+I GL SL                      
Sbjct: 1080 ELP--IETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHF 1137

Query: 779  -RMMYPSGCSKLKNVTETLGKVESL 802
             R +    C  LK + +T+GK+++L
Sbjct: 1138 IRQLDLRNCKSLKALPKTIGKMDTL 1162



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 59/273 (21%)

Query: 593  HLMCC---------INSMVSQAKAISQQGQFVKMISVDSGCMSCYKKW--GRQTVRRQSP 641
            HLM C         IN ++S  K +   G  V+ + +++G + C      G     +Q P
Sbjct: 1048 HLMRCTSLSTIPETINKLMS-LKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVP 1106

Query: 642  QEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
               G  + L          +Q+  D T I  L   I  L  + QL L  CK+L+ LP+TI
Sbjct: 1107 SSIGGLNSL----------LQLQLDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPKTI 1156

Query: 702  SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
              +  L +LNL G S   E PE     + L+E+ +                        +
Sbjct: 1157 GKMDTLYSLNLVG-SNIEELPEEFGKLENLVELRM-----------------------NN 1192

Query: 762  CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV---------RLSSWNRP 812
            CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         R+S  N P
Sbjct: 1193 CKMLKRLPKSFGDLKSLHRLYMQE-TLVAELPESFGNLSNLMVLEMLKKPLFRISESNVP 1251

Query: 813  KMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                +   VE     + +KL K E L D+ SW+
Sbjct: 1252 GTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 1281



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            L+QL L  C +L      +S LK L    LSG S     PE   S   L E+ L+GTAI 
Sbjct: 926  LLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAIS 985

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             LP SI  L      +L  C++++ LPS +  L SL  +Y    + L+N+  ++G +++L
Sbjct: 986  NLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTA-LRNLPSSIGDLKNL 1044

Query: 803  E 803
            +
Sbjct: 1045 Q 1045



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 151/353 (42%), Gaps = 76/353 (21%)

Query: 43   SLPV-TISSLKCLRTLELSGCS---KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
            ++PV + + +K LR L+++       LK  P       +L  +   G  +  +P  I L 
Sbjct: 799  TIPVESFAPMKKLRLLQINNVELEGDLKLLPS------ELKWIQWKGFPLENLPPDI-LS 851

Query: 99   PGLELLYLNE--CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD--------------- 141
              L +L L+E   + +  LP    G ++LK +NL GC  LE +PD               
Sbjct: 852  RQLGVLDLSESGVRRVKTLPRK-RGDENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERC 910

Query: 142  --------TLGKVESLEELDVSGTAIRRPTS-SIFL-----MKNLRSLYFSGCNEPPASA 187
                    ++G +  L +LD     +RR +S S FL     +K L   + SGC+      
Sbjct: 911  NLLVKVPRSVGNLGKLLQLD-----LRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSV-- 963

Query: 188  SWHLHLPFNLLGKSSCPVALMLP---------SLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                 LP N +G   C   L+L          S+  +  L KL L  C   E  +PS + 
Sbjct: 964  -----LPEN-IGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIE-ELPSCVG 1016

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRAN 293
             L SL++LYL+      LP+SI  L NL++L L  C  L ++P+    L      F+  +
Sbjct: 1017 YLTSLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGS 1076

Query: 294  GCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP 346
                L    G+L LC +  +  +C    K L++   +I  L   L+LQ  S P
Sbjct: 1077 AVEELPIETGSL-LCLTDLSAGDC----KFLKQVPSSIGGLNSLLQLQLDSTP 1124



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-T 739
            G++ L+ +G + ++ LPR     + L  +NL G       P++ S+ + L ++ LE   
Sbjct: 854 LGVLDLSESGVRRVKTLPRK-RGDENLKVVNLRGCHGLEAIPDL-SNHNALEKLVLERCN 911

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            +  +P S+  L   +  +L+ C +L      ++GL+ L   + SGCS L  + E +G +
Sbjct: 912 LLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSM 971

Query: 800 ESLE 803
             L+
Sbjct: 972 PCLK 975


>gi|15223444|ref|NP_174038.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332192670|gb|AEE30791.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1556

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 191/412 (46%), Gaps = 59/412 (14%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTIS----------------- 49
            L DLYLD T++  +PSSI  L  L+ L L  C +LS++P TI+                 
Sbjct: 987  LEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEE 1046

Query: 50   ------SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
                  SL CL  L    C  LK+ P  +  +  L +L LD T I  +P  I  L  +  
Sbjct: 1047 LPIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHFIRQ 1106

Query: 104  LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRP 162
            L L  CK+L  LP +I  + +L +LNL G   +E +P+  GK+E+L EL ++    ++R 
Sbjct: 1107 LDLRNCKSLKALPKTIGKMDTLYSLNLVG-SNIEELPEEFGKLENLVELRMNNCKMLKRL 1165

Query: 163  TSSIFLMKNLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVA 206
              S   +K+L  LY       E P S            L  P       N+ G S  P  
Sbjct: 1166 PKSFGDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRF 1225

Query: 207  LMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            + +P S + +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L N
Sbjct: 1226 VEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSN 1284

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
            L+EL L DC+ L+ LP +P  L+ +    C SL ++    +L  +  T +N  +  K++ 
Sbjct: 1285 LQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL--TILTDLNLTNCAKVVD 1342

Query: 326  KNGLA--ISMLREYLE----------LQAVSDPGHKL--SIVFPGSQIPKWF 363
              GL    ++ R Y+            + +S    K+  ++  PG+++P WF
Sbjct: 1343 IPGLEHLTALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF 1394



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 142/293 (48%), Gaps = 31/293 (10%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + +VP S+  L  L  L L+ C +LS     +S LKCL    LSGCS L   P+ + SM 
Sbjct: 879  LVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMP 938

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
             L +L LDGT+I+ +P SI  L  LE L L  C++                       L 
Sbjct: 939  CLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTALR 998

Query: 114  RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR---PTSSIFLMK 170
             LPSSI  LK+L+ L+L  C  L  +P+T+ K+ SL+EL ++G+A+      T S+  + 
Sbjct: 999  NLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSLLCLT 1058

Query: 171  NLRSLYFSGCNEPPAS-ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
            +L +       + P+S    +  L   L    S P+  +   +  +  + +LDL +C   
Sbjct: 1059 DLSAGDCKFLKQVPSSIGGLNSLLQLQL---DSTPIEALPEEIGDLHFIRQLDLRNCK-S 1114

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
              A+P  I  + +L  L L  +N   LP     L NL EL + +CK L+ LP+
Sbjct: 1115 LKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLKRLPK 1167



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 50/205 (24%)

Query: 646  NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLER--------- 696
            N S L E     P + ++L DGT I  L  +I  L  L +L+L GC+++E          
Sbjct: 926  NLSVLPENIGSMPCLKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLT 985

Query: 697  --------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                          LP +I  LK L  L+L   +     PE  +    L E+ + G+A+ 
Sbjct: 986  SLEDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVE 1045

Query: 743  GLPASIELLSGNILSNLK--DCKNLKSLPSTINGLRSL---------------------- 778
             LP  IE  S   L++L   DCK LK +PS+I GL SL                      
Sbjct: 1046 ELP--IETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHF 1103

Query: 779  -RMMYPSGCSKLKNVTETLGKVESL 802
             R +    C  LK + +T+GK+++L
Sbjct: 1104 IRQLDLRNCKSLKALPKTIGKMDTL 1128



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 112/273 (41%), Gaps = 59/273 (21%)

Query: 593  HLMCC---------INSMVSQAKAISQQGQFVKMISVDSGCMSCYKKW--GRQTVRRQSP 641
            HLM C         IN ++S  K +   G  V+ + +++G + C      G     +Q P
Sbjct: 1014 HLMRCTSLSTIPETINKLMS-LKELFINGSAVEELPIETGSLLCLTDLSAGDCKFLKQVP 1072

Query: 642  QEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
               G  + L          +Q+  D T I  L   I  L  + QL L  CK+L+ LP+TI
Sbjct: 1073 SSIGGLNSL----------LQLQLDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPKTI 1122

Query: 702  SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
              +  L +LNL G S   E PE     + L+E+ +                        +
Sbjct: 1123 GKMDTLYSLNLVG-SNIEELPEEFGKLENLVELRM-----------------------NN 1158

Query: 762  CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV---------RLSSWNRP 812
            CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         R+S  N P
Sbjct: 1159 CKMLKRLPKSFGDLKSLHRLYMQE-TLVAELPESFGNLSNLMVLEMLKKPLFRISESNVP 1217

Query: 813  KMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                +   VE     + +KL K E L D+ SW+
Sbjct: 1218 GTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 1247



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            L+QL L  C +L      +S LK L    LSG S     PE   S   L E+ L+GTAI 
Sbjct: 892  LLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAIS 951

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             LP SI  L      +L  C++++ LPS +  L SL  +Y    + L+N+  ++G +++L
Sbjct: 952  NLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTA-LRNLPSSIGDLKNL 1010

Query: 803  E 803
            +
Sbjct: 1011 Q 1011



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 115/269 (42%), Gaps = 62/269 (23%)

Query: 121  GLKSLKTLNLSGCCKLENVPD-----------------------TLGKVESLEELDVSGT 157
            G ++LK +NL GC  LE +PD                       ++G +  L +LD    
Sbjct: 841  GDENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQLD---- 896

Query: 158  AIRRPTS-SIFL-----MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP- 210
             +RR +S S FL     +K L   + SGC+           LP N +G   C   L+L  
Sbjct: 897  -LRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSV-------LPEN-IGSMPCLKELLLDG 947

Query: 211  --------SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
                    S+  +  L KL L  C   E  +PS +  L SL++LYL+      LP+SI  
Sbjct: 948  TAISNLPYSIFRLQKLEKLSLMGCRSIE-ELPSCVGYLTSLEDLYLDDTALRNLPSSIGD 1006

Query: 263  LLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALKLCRSKYTIINC 317
            L NL++L L  C  L ++P+    L      F+  +    L    G+L LC +  +  +C
Sbjct: 1007 LKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSL-LCLTDLSAGDC 1065

Query: 318  IDSLKLLRKNGLAISMLREYLELQAVSDP 346
                K L++   +I  L   L+LQ  S P
Sbjct: 1066 ----KFLKQVPSSIGGLNSLLQLQLDSTP 1090



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-T 739
            G++ L+ +G + ++ LPR     + L  +NL G       P++ S+ + L ++ LE   
Sbjct: 820 LGVLDLSESGVRRVKTLPRK-RGDENLKVVNLRGCHGLEAIPDL-SNHNALEKLVLERCN 877

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            +  +P S+  L   +  +L+ C +L      ++GL+ L   + SGCS L  + E +G +
Sbjct: 878 LLVKVPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSM 937

Query: 800 ESLE 803
             L+
Sbjct: 938 PCLK 941


>gi|326516606|dbj|BAJ92458.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 876

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 156/289 (53%), Gaps = 35/289 (12%)

Query: 10  LYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L L+G+  I+ +PSS+  L  L  L L  C ++  +P ++ SL  LRTL+LSGC KL+  
Sbjct: 612 LNLNGSREISAIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESL 671

Query: 69  PQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           P+ + S+E++  L L     +  +P  +  L  L+ L L+ C+ L  LP S+  LK+L+T
Sbjct: 672 PESLGSLENIQTLDLSVCDELKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQT 731

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNE---- 182
           L+LSGC KLE++P++LG +++L+ + +     +     S+  +KNL++L  S C++    
Sbjct: 732 LDLSGCGKLESLPESLGSLKTLQRMHLFACHKLEFLPESLGGLKNLQTLDLSHCDKLESL 791

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
           P +  S      F+L   SSC     LP SL G+ +L  LDL+ C              H
Sbjct: 792 PESLGSLQNLYTFDL---SSCFELKSLPESLGGLKNLQTLDLTFC--------------H 834

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
            LK+          LP S+  L NL+ L L  C RL+SLP+ P NL+ +
Sbjct: 835 RLKD----------LPESLESLKNLQTLNLSGCYRLKSLPKGPENLKII 873



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 160/303 (52%), Gaps = 16/303 (5%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L   SITE PS++  L  LE+L     ++    P +I+ L  L  L L+G  ++   P
Sbjct: 566 LDLSRCSITEFPSTVGQLKQLEVLIAPELQD-RQFPDSITRLSRLHYLNLNGSREISAIP 624

Query: 70  QIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
             V+ +E L  LYL   TS+  +P S+  L  L  L L+ C+ L  LP S+  L++++TL
Sbjct: 625 SSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQTL 684

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE----P 183
           +LS C +L+++P+ LG + +L+ LD+SG   +     S+  +K L++L  SGC +    P
Sbjct: 685 DLSVCDELKSLPECLGSLNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLP 744

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            +  S       +L    +C     LP SL G+ +L  LDLS C   E ++P  + +L +
Sbjct: 745 ESLGSLKTLQRMHLF---ACHKLEFLPESLGGLKNLQTLDLSHCDKLE-SLPESLGSLQN 800

Query: 243 LKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQFVRANGCSSL 298
           L    L+      +LP S+ GL NL+ L+L  C RL+ LP   +   NLQ +  +GC  L
Sbjct: 801 LYTFDLSSCFELKSLPESLGGLKNLQTLDLTFCHRLKDLPESLESLKNLQTLNLSGCYRL 860

Query: 299 VTL 301
            +L
Sbjct: 861 KSL 863



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 28/262 (10%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SI 88
           L +L L  C +++  P T+  LK L  L ++   + ++FP  +  +  L  L L+G+  I
Sbjct: 563 LRVLDLSRC-SITEFPSTVGQLKQLEVL-IAPELQDRQFPDSITRLSRLHYLNLNGSREI 620

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
           + +PSS+  L  L  LYL  C ++  +P S+  L +L+TL+LSGC KLE++P++LG +E+
Sbjct: 621 SAIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLEN 680

Query: 149 LEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVAL 207
           ++ LD+S    ++     +  + NL +L  SGC +  +       LP             
Sbjct: 681 IQTLDLSVCDELKSLPECLGSLNNLDTLDLSGCRKLES-------LP------------- 720

Query: 208 MLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNL 266
              SL  + +L  LDLS CG  E ++P  + +L +L+ ++L   +    LP S+ GL NL
Sbjct: 721 --KSLGSLKTLQTLDLSGCGKLE-SLPESLGSLKTLQRMHLFACHKLEFLPESLGGLKNL 777

Query: 267 EELELEDCKRLQSLPQIPPNLQ 288
           + L+L  C +L+SLP+   +LQ
Sbjct: 778 QTLDLSHCDKLESLPESLGSLQ 799



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 69/126 (54%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L L+GC+ LE LP+++ +LK L TL+LSG  K    PE   S   L  +HL   
Sbjct: 702 LNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPESLGSLKTLQRMHLFAC 761

Query: 740 -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP S+  L      +L  C  L+SLP ++  L++L     S C +LK++ E+LG 
Sbjct: 762 HKLEFLPESLGGLKNLQTLDLSHCDKLESLPESLGSLQNLYTFDLSSCFELKSLPESLGG 821

Query: 799 VESLEV 804
           +++L+ 
Sbjct: 822 LKNLQT 827



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 86/157 (54%), Gaps = 9/157 (5%)

Query: 656 EFPDIVQVLS-------DGT-DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +FPD +  LS       +G+ +I  +  ++  L  LV L L  C +++ +P ++ +L  L
Sbjct: 598 QFPDSITRLSRLHYLNLNGSREISAIPSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNL 657

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLK 766
            TL+LSG  K    PE   S + +  + L     ++ LP  +  L+     +L  C+ L+
Sbjct: 658 RTLDLSGCQKLESLPESLGSLENIQTLDLSVCDELKSLPECLGSLNNLDTLDLSGCRKLE 717

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           SLP ++  L++L+ +  SGC KL+++ E+LG +++L+
Sbjct: 718 SLPKSLGSLKTLQTLDLSGCGKLESLPESLGSLKTLQ 754



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 1/138 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ +  ++  L  L  L L+GC+ LE LP ++ +L+ + TL+LS   + +  PE   S
Sbjct: 642 TSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQTLDLSVCDELKSLPECLGS 701

Query: 728 RDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            + L  + L G   +  LP S+  L      +L  C  L+SLP ++  L++L+ M+   C
Sbjct: 702 LNNLDTLDLSGCRKLESLPKSLGSLKTLQTLDLSGCGKLESLPESLGSLKTLQRMHLFAC 761

Query: 787 SKLKNVTETLGKVESLEV 804
            KL+ + E+LG +++L+ 
Sbjct: 762 HKLEFLPESLGGLKNLQT 779



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           L ++ L  C  LE LP ++  LK L TL+LS   K    PE   S   L    L     +
Sbjct: 753 LQRMHLFACHKLEFLPESLGGLKNLQTLDLSHCDKLESLPESLGSLQNLYTFDLSSCFEL 812

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           + LP S+  L      +L  C  LK LP ++  L++L+ +  SGC +LK++
Sbjct: 813 KSLPESLGGLKNLQTLDLTFCHRLKDLPESLESLKNLQTLNLSGCYRLKSL 863



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 3/120 (2%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L L+ C ++   P T+  LK L  L    L   R+FP+  +   +L  ++L G+  I  +
Sbjct: 566 LDLSRC-SITEFPSTVGQLKQLEVLIAPELQD-RQFPDSITRLSRLHYLNLNGSREISAI 623

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P+S+  L   +   L  C ++K +P ++  L +LR +  SGC KL+++ E+LG +E+++ 
Sbjct: 624 PSSVSKLESLVHLYLAYCTSVKVIPDSLGSLNNLRTLDLSGCQKLESLPESLGSLENIQT 683



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L L+ C  LE LP ++ +L+ L T +LS   + +  PE       L  + L   
Sbjct: 774 LKNLQTLDLSHCDKLESLPESLGSLQNLYTFDLSSCFELKSLPESLGGLKNLQTLDLTFC 833

Query: 740 -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             ++ LP S+E L      NL  C  LKSLP     L+
Sbjct: 834 HRLKDLPESLESLKNLQTLNLSGCYRLKSLPKGPENLK 871


>gi|105922849|gb|ABF81440.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1228

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 100/154 (64%), Gaps = 2/154 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L ++G TS++EV  S+     L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 681 LTGIPNLESLIIEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MESLKICTL 739

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M +L  L LD T I E+ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 740 DGCSKLEKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIPSSI 799

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD 153
             LKSLK L+LSGC +L+ +P+ LGKVESLEE D
Sbjct: 800 GFLKSLKKLDLSGCSELKYIPENLGKVESLEEFD 833



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 148/368 (40%), Gaps = 82/368 (22%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--- 180
           +LK +NLS    L   PD  G                        + NL SL   GC   
Sbjct: 663 NLKIINLSNSLNLSKTPDLTG------------------------IPNLESLIIEGCTSL 698

Query: 181 NEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           +E   S + H  L + NL+   +C    +LP+   + SL    L  C   E   P  + N
Sbjct: 699 SEVHPSLAHHKKLQYMNLV---NCKSIRILPNNLEMESLKICTLDGCSKLE-KFPDIVGN 754

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           ++ L  L L+      L +SI  L+ L  L +  CK L+S+P               S +
Sbjct: 755 MNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIP---------------SSI 799

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
               +LK    K  +  C   LK + +N   +  L E+     +S+P     I  PG++I
Sbjct: 800 GFLKSLK----KLDLSGC-SELKYIPENLGKVESLEEF---DGLSNPRTGFGIAVPGNEI 851

Query: 360 PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
           P WF +Q++GSSI+V  PS+       +GF  C  F             +Y    L C  
Sbjct: 852 PGWFNHQSKGSSISVQVPSW------SMGFVACVAFS------------AYGERPLRCDF 893

Query: 420 DGSGEGHY---IYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSISDP 471
             +G  +Y   +        V+SDH+WL +L     +    WQ ES + I LSF S    
Sbjct: 894 KANGRENYPSLMCISCNSIQVLSDHIWLFYLSFDYLKELKEWQHESFSNIELSFHSYERR 953

Query: 472 TWKVKRCG 479
             KVK CG
Sbjct: 954 V-KVKNCG 960



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++  ++ +G T + E+  ++     L  + L  CK++  LP  +  ++ L    L G S
Sbjct: 685 PNLESLIIEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MESLKICTLDGCS 743

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K  +FP+I  + ++L+ + L+ T I  L +SI  L G  L ++  CKNL+S+PS+I  L+
Sbjct: 744 KLEKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIPSSIGFLK 803

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL+ +  SGCS+LK + E LGKVESLE
Sbjct: 804 SLKKLDLSGCSELKYIPENLGKVESLE 830



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 28/195 (14%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ + LS    L K P +   + +L  L ++G TS++EV  S+     L+ + L  CK++
Sbjct: 664 LKIINLSNSLNLSKTPDLTG-IPNLESLIIEGCTSLSEVHPSLAHHKKLQYMNLVNCKSI 722

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP+++  ++SLK   L GC KLE  PD +G +  L  L +  T I   +SSI      
Sbjct: 723 RILPNNLE-MESLKICTLDGCSKLEKFPDIVGNMNELMVLRLDETGITELSSSIR----- 776

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEA 231
                            HL +   LL  +SC     +PS  G   SL KLDLS C     
Sbjct: 777 -----------------HL-IGLGLLSMNSCKNLESIPSSIGFLKSLKKLDLSGCS-ELK 817

Query: 232 AIPSDIDNLHSLKEL 246
            IP ++  + SL+E 
Sbjct: 818 YIPENLGKVESLEEF 832



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 50/84 (59%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDIV  ++       D T I ELS +I  L GL  L++N CKNLE +P 
Sbjct: 742 CSKL----EKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIPS 797

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  LK L  L+LSG S+ +  PE
Sbjct: 798 SIGFLKSLKKLDLSGCSELKYIPE 821


>gi|311992493|gb|ABR67409.2| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 947

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 149/301 (49%), Gaps = 41/301 (13%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L  LYL + T++  +  S+  L  L+ L L+ C NLS LP  +  LK L+ LEL
Sbjct: 669 LSAASNLERLYLQECTNLRLIHESVGSLDKLDHLDLRQCTNLSKLPSHLR-LKSLQNLEL 727

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S C KL+ FP I  +M+ L  L LD T+I E+PSSI  L  L  L L  C NL+ LP++I
Sbjct: 728 SRCCKLESFPTIDENMKSLRHLDLDFTAIKELPSSIGYLTELCTLNLTSCTNLISLPNTI 787

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L++L  L LSGC +    P          + D S   +  PT  I             
Sbjct: 788 YLLRNLDELLLSGCSRFRIFP---------HKWDRSIQPVCSPTKMI------------- 825

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI-D 238
                 + SW L  P            L++P+ +     T LDL  C +  A     + D
Sbjct: 826 -----ETTSWSLEFP-----------HLLVPNESLFSHFTLLDLKSCNISNAKFLEILCD 869

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
               L +L L+ N F +LP+ +   ++L  LEL++CK LQ +P +P N+Q + A+GC SL
Sbjct: 870 VAPFLSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFLQEIPNLPKNIQKMDASGCESL 929

Query: 299 V 299
           V
Sbjct: 930 V 930



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + T++R +  ++  L  L  L L  C NL +LP  +  LK L  L LS   K   FP 
Sbjct: 680 LQECTNLRLIHESVGSLDKLDHLDLRQCTNLSKLPSHLR-LKSLQNLELSRCCKLESFPT 738

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           I  +   L  + L+ TAI+ LP+SI  L+     NL  C NL SLP+TI  LR+L  +  
Sbjct: 739 IDENMKSLRHLDLDFTAIKELPSSIGYLTELCTLNLTSCTNLISLPNTIYLLRNLDELLL 798

Query: 784 SGCSKLK 790
           SGCS+ +
Sbjct: 799 SGCSRFR 805



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 112/278 (40%), Gaps = 31/278 (11%)

Query: 15  TSITEVPSSIELLT--GLELLTLKGC---KNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           T I  +P S++ +   G    TL  C   KNL  L +  S +K      L  C +LK   
Sbjct: 527 TKIEYLPDSLKWIKWHGFPQSTLPSCFITKNLVGLDLQHSFIKTFEK-RLKDCERLKHV- 584

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
                  DLS      T + ++P        L  LYL  C NL  +  S+  L +L  LN
Sbjct: 585 -------DLSY----STLLEQIPD-FSAASNLGELYLINCTNLGMIDKSLFSLNNLIVLN 632

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC------NEP 183
           L GC  L+  P     + SL+EL +S          +    NL  LY   C      +E 
Sbjct: 633 LDGCSNLKKFPRGYFMLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHES 692

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
             S     HL         C     LPS   + SL  L+LS C   E + P+  +N+ SL
Sbjct: 693 VGSLDKLDHLDLR-----QCTNLSKLPSHLRLKSLQNLELSRCCKLE-SFPTIDENMKSL 746

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           + L L+      LP+SI  L  L  L L  C  L SLP
Sbjct: 747 RHLDLDFTAIKELPSSIGYLTELCTLNLTSCTNLISLP 784



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 6/133 (4%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L+ L L+GC NL++ PR    L  L  L LS   K  + P+++++ + L  ++L E 
Sbjct: 625 LNNLIVLNLDGCSNLKKFPRGYFMLSSLKELRLSYCKKLEKIPDLSAASN-LERLYLQEC 683

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN---VTET 795
           T +R +  S+  L      +L+ C NL  LPS +  L+SL+ +  S C KL++   + E 
Sbjct: 684 TNLRLIHESVGSLDKLDHLDLRQCTNLSKLPSHLR-LKSLQNLELSRCCKLESFPTIDEN 742

Query: 796 LGKVESLEVRLSS 808
           +  +  L++  ++
Sbjct: 743 MKSLRHLDLDFTA 755


>gi|224171160|ref|XP_002339466.1| predicted protein [Populus trichocarpa]
 gi|222875162|gb|EEF12293.1| predicted protein [Populus trichocarpa]
          Length = 307

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 158/312 (50%), Gaps = 37/312 (11%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L  + T+I E+P SI   + L  L L+  K L +LP +I  LK +  +++SGCS + KFP
Sbjct: 12  LNFNETAIKELPQSIGHRSRLVALNLREFKQLGNLPNSICLLKSIVIVDVSGCSNVTKFP 71

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            I  +      LYL GT++ E PSS+  L  + L  L+ C  L  LPS+I  L  L+ LN
Sbjct: 72  NIPGNTR---YLYLSGTAVEEFPSSVGHLWRISL-DLSNCGRLKNLPSTIYELAYLEKLN 127

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAI------RRPTSSIFLMKNLRSLYFSGCNEP 183
           LSGC  +   P+      +++EL + GT I      RR    +  M++LR LY       
Sbjct: 128 LSGCSSITEFPNI---SWNIKELYLDGTTIEEIIVNRRFPGILETMESLRYLYLD----- 179

Query: 184 PASASWHLHLPFNLLGKSSCPVAL---------------MLPSLTGVCSLTKLDLSDCGL 228
             +    L  P   L K  C +AL               +L     +  L KL+LS CG+
Sbjct: 180 -RTGIRKLSSPIRNL-KGLCCLALGNCKYLEGKYLGDLRLLEQDVDLKYLRKLNLSGCGI 237

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            E  +P  +  L SL+ L L+ NNFV LP +IS L  L+ L L  C+RL SL ++PP L 
Sbjct: 238 LE--VPKSLGCLTSLEALDLSGNNFVRLPTNISELYELQYLGLRYCRRLGSLQKLPPRLA 295

Query: 289 FVRANGCSSLVT 300
            + A+ C+SL T
Sbjct: 296 KLDAHSCTSLRT 307



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 16/159 (10%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I+EL  +I     LV L L   K L  LP +I  LK +  +++SG S   +FP I  +
Sbjct: 17  TAIKELPQSIGHRSRLVALNLREFKQLGNLPNSICLLKSIVIVDVSGCSNVTKFPNIPGN 76

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L   +L GTA+   P+S+  L   I  +L +C  LK+LPSTI  L  L  +  SGCS
Sbjct: 77  TRYL---YLSGTAVEEFPSSVGHL-WRISLDLSNCGRLKNLPSTIYELAYLEKLNLSGCS 132

Query: 788 KLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAV 826
            +                  SWN  ++  D   +E+  V
Sbjct: 133 SITEFPNI------------SWNIKELYLDGTTIEEIIV 159



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 22/161 (13%)

Query: 6   DLSDLYLDGTSITEV------PSSIELLTGLELLTLK--GCKNLSSLPVTISSLKCLRTL 57
           ++ +LYLDGT+I E+      P  +E +  L  L L   G + LSS    I +LK L  L
Sbjct: 143 NIKELYLDGTTIEEIIVNRRFPGILETMESLRYLYLDRTGIRKLSS---PIRNLKGLCCL 199

Query: 58  ELSGCSKLK-------KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
            L  C  L+       +  +    ++ L KL L G  I EVP S+  L  LE L L+   
Sbjct: 200 ALGNCKYLEGKYLGDLRLLEQDVDLKYLRKLNLSGCGILEVPKSLGCLTSLEALDLSG-N 258

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCK---LENVPDTLGKVES 148
           N VRLP++I+ L  L+ L L  C +   L+ +P  L K+++
Sbjct: 259 NFVRLPTNISELYELQYLGLRYCRRLGSLQKLPPRLAKLDA 299



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 11/210 (5%)

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           + E +  L  + T+I E+P SI     L  L L E K L  LP+SI  LKS+  +++SGC
Sbjct: 5   TTEHVMYLNFNETAIKELPQSIGHRSRLVALNLREFKQLGNLPNSICLLKSIVIVDVSGC 64

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             +   P+  G    L    +SGTA+    SS+  +  + SL  S C       S    L
Sbjct: 65  SNVTKFPNIPGNTRYLY---LSGTAVEEFPSSVGHLWRI-SLDLSNCGRLKNLPSTIYEL 120

Query: 194 PF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI----PSDIDNLHSLKELYL 248
            +   L  S C      P+++   ++ +L L    + E  +    P  ++ + SL+ LYL
Sbjct: 121 AYLEKLNLSGCSSITEFPNISW--NIKELYLDGTTIEEIIVNRRFPGILETMESLRYLYL 178

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQ 278
           +R     L + I  L  L  L L +CK L+
Sbjct: 179 DRTGIRKLSSPIRNLKGLCCLALGNCKYLE 208



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 50/198 (25%)

Query: 641 PQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P  PGN   L+               GT + E   ++  L+  + L L+ C  L+ LP T
Sbjct: 71  PNIPGNTRYLY-------------LSGTAVEEFPSSVGHLWR-ISLDLSNCGRLKNLPST 116

Query: 701 ISALKYLSTLNLSGLSKFREFPEIT--------------------------SSRDQLLEI 734
           I  L YL  LNLSG S   EFP I+                           + + L  +
Sbjct: 117 IYELAYLEKLNLSGCSSITEFPNISWNIKELYLDGTTIEEIIVNRRFPGILETMESLRYL 176

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCK--------NLKSLPSTINGLRSLRMMYPSGC 786
           +L+ T IR L + I  L G     L +CK        +L+ L   ++ L+ LR +  SGC
Sbjct: 177 YLDRTGIRKLSSPIRNLKGLCCLALGNCKYLEGKYLGDLRLLEQDVD-LKYLRKLNLSGC 235

Query: 787 SKLKNVTETLGKVESLEV 804
             L+ V ++LG + SLE 
Sbjct: 236 GILE-VPKSLGCLTSLEA 252


>gi|297850936|ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339191|gb|EFH69608.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1401

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 203/474 (42%), Gaps = 114/474 (24%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN-------------------- 40
            + SM  L +L LDGT+I+ +P SI  L  LE L+L GC++                    
Sbjct: 769  IGSMPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLD 828

Query: 41   ---LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
               L +LP++I  LK L+ L L  C+ L K P  +  +  L +L+++G+++ E+P     
Sbjct: 829  DTALRNLPISIGDLKNLQKLHLMRCTSLSKIPDTINKLISLKELFINGSAVEELPLVTGS 888

Query: 98   LPGLELLYLNECKNLVRLPSSING-----------------------LKSLKTLNLSGCC 134
            L  L+ L   +CK+L ++PSSI G                       L  ++ L L  C 
Sbjct: 889  LLCLKDLSAGDCKSLKQVPSSIGGLNFLLQLQLNSTPIESLPEEIGDLHFIRQLELRNCK 948

Query: 135  KLENVPDTLGKVESLEELDVSGTAI------------------------RRPTSSIFLMK 170
             L+ +P+++GK+++L  L + G+ I                        +R   S   +K
Sbjct: 949  SLKALPESIGKMDTLHNLYLEGSNIEKLPKDFGKLEKLVVLRMNNCEKLKRLPESFGDLK 1008

Query: 171  NLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
            +LR LY      +E P S            L  P       N  G S  P  + +P S +
Sbjct: 1009 SLRHLYMKETLVSELPESFGNLSKLMVLEMLKKPLFRISESNAPGTSEEPRFVEVPNSFS 1068

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             + SL +LD     +    IP D++ L SL +L L  N F +LP+S+ GL NL+EL L D
Sbjct: 1069 NLTSLEELDACSWRIS-GKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLRD 1127

Query: 274  CKRLQSLPQIPPNLQFVRANGCSSL--------VTLFGALKLCR---------------- 309
            C+ L+ LP +P  L+ +    C SL        +T+   L L                  
Sbjct: 1128 CRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTILEDLNLTNCGKVVDIPGLEHLMAL 1187

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWF 363
             +  +  C  +  L  K  L+  + R    L+A       LS+  PG+++P WF
Sbjct: 1188 KRLYMTGCNSNYSLAVKKRLSKVIPRTSQNLRASLKMLRNLSL--PGNRVPDWF 1239



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 149/301 (49%), Gaps = 29/301 (9%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + +VP S+  L  L  L L+ C  LS   V +S LKCL  L LSGCS L   P+ + SM 
Sbjct: 714  LVKVPRSVGNLRKLLQLDLRRCSKLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMP 773

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS------------------- 117
             L +L LDGT+I+ +P SI  L  LE L L  C+++  LPS                   
Sbjct: 774  CLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLDDTALR 833

Query: 118  ----SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR---PTSSIFLMK 170
                SI  LK+L+ L+L  C  L  +PDT+ K+ SL+EL ++G+A+      T S+  +K
Sbjct: 834  NLPISIGDLKNLQKLHLMRCTSLSKIPDTINKLISLKELFINGSAVEELPLVTGSLLCLK 893

Query: 171  NLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
            +L +       + P+S      L    L  +S P+  +   +  +  + +L+L +C    
Sbjct: 894  DLSAGDCKSLKQVPSSIGGLNFL--LQLQLNSTPIESLPEEIGDLHFIRQLELRNCK-SL 950

Query: 231  AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
             A+P  I  + +L  LYL  +N   LP     L  L  L + +C++L+ LP+   +L+ +
Sbjct: 951  KALPESIGKMDTLHNLYLEGSNIEKLPKDFGKLEKLVVLRMNNCEKLKRLPESFGDLKSL 1010

Query: 291  R 291
            R
Sbjct: 1011 R 1011



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 46/299 (15%)

Query: 18  TEVPSSIELL-TGLELLTLKGCKNLSSLPVTISSLKCLRTLELS--GCSKLKKFPQIVAS 74
            E+  +++LL + L+ +  KGC  L +LP  I + + L  L+LS  G  +++  P     
Sbjct: 620 VELEGNLKLLPSELKWIQWKGCP-LENLPPDILA-RQLGVLDLSESGIRRVQTLPSKKVD 677

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS---------------- 118
            E+L  + L G    +    +     LE L    C  LV++P S                
Sbjct: 678 -ENLKVINLRGCHSLKAIPDLSNHKALEKLVFERCNLLVKVPRSVGNLRKLLQLDLRRCS 736

Query: 119 --------INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
                   ++GLK L+ L LSGC  L  +P+ +G +  L+EL + GTAI     SIF ++
Sbjct: 737 KLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPDSIFRLQ 796

Query: 171 NLRSLYFSGC---NEPPA-----SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
            L  L   GC    E P+     ++   L+L    L   + P+     S+  + +L KL 
Sbjct: 797 KLEKLSLMGCRSIQELPSCLGKLTSLEDLYLDDTAL--RNLPI-----SIGDLKNLQKLH 849

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L  C    + IP  I+ L SLKEL++N +    LP     LL L++L   DCK L+ +P
Sbjct: 850 LMRCT-SLSKIPDTINKLISLKELFINGSAVEELPLVTGSLLCLKDLSAGDCKSLKQVP 907



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 55/247 (22%)

Query: 646  NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR------ 699
            N S L E     P + ++L DGT I  L  +I  L  L +L+L GC++++ LP       
Sbjct: 761  NLSVLPENIGSMPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLT 820

Query: 700  -----------------TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                             +I  LK L  L+L   +   + P+  +    L E+ + G+A+ 
Sbjct: 821  SLEDLYLDDTALRNLPISIGDLKNLQKLHLMRCTSLSKIPDTINKLISLKELFINGSAVE 880

Query: 743  GLPASIELLSGNILS----NLKDCKNLKSLPSTING-----------------------L 775
             LP    L++G++L     +  DCK+LK +PS+I G                       L
Sbjct: 881  ELP----LVTGSLLCLKDLSAGDCKSLKQVPSSIGGLNFLLQLQLNSTPIESLPEEIGDL 936

Query: 776  RSLRMMYPSGCSKLKNVTETLGKVESLE-VRLSSWNRPKMQNDFDCVEQSAVETVTKLAK 834
              +R +    C  LK + E++GK+++L  + L   N  K+  DF  +E+  V  +    K
Sbjct: 937  HFIRQLELRNCKSLKALPESIGKMDTLHNLYLEGSNIEKLPKDFGKLEKLVVLRMNNCEK 996

Query: 835  AELLRDS 841
             + L +S
Sbjct: 997  LKRLPES 1003



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L+QL L  C  L      +S LK L  L LSG S     PE   S   L E+ L+GT
Sbjct: 724 LRKLLQLDLRRCSKLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGT 783

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           AI  LP SI  L      +L  C++++ LPS +  L SL  +Y    + L+N+  ++G +
Sbjct: 784 AISNLPDSIFRLQKLEKLSLMGCRSIQELPSCLGKLTSLEDLYLDDTA-LRNLPISIGDL 842

Query: 800 ESLE 803
           ++L+
Sbjct: 843 KNLQ 846



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 34/229 (14%)

Query: 648  SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
            S++ +  ++   + ++  +G+ + EL L    L  L  L+   CK+L             
Sbjct: 857  SKIPDTINKLISLKELFINGSAVEELPLVTGSLLCLKDLSAGDCKSLKQVPSSIGGLNFL 916

Query: 695  ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                      E LP  I  L ++  L L      +  PE     D L  ++LEG+ I  L
Sbjct: 917  LQLQLNSTPIESLPEEIGDLHFIRQLELRNCKSLKALPESIGKMDTLHNLYLEGSNIEKL 976

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY--PSGCSKLKNVTETLGKVESL 802
            P     L   ++  + +C+ LK LP +   L+SLR +Y   +  S+L      L K+  L
Sbjct: 977  PKDFGKLEKLVVLRMNNCEKLKRLPESFGDLKSLRHLYMKETLVSELPESFGNLSKLMVL 1036

Query: 803  EV------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
            E+      R+S  N P    +   VE     + + L   E L D+ SW+
Sbjct: 1037 EMLKKPLFRISESNAPGTSEEPRFVE--VPNSFSNLTSLEEL-DACSWR 1082


>gi|168052882|ref|XP_001778868.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669737|gb|EDQ56318.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 532

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 25/304 (8%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  L+ L  L L GC +L+SLP  +++L  L+ L LSGCS L   P  +A+
Sbjct: 135 SSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLNLSGCSSLISLPNELAN 194

Query: 75  MEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L +LYL+G  S+  +P+ +  L  L+ LYLN C +L RLP+ +  L SL  L+L GC
Sbjct: 195 ISSLDELYLNGCLSLISLPNELANLSSLKKLYLNNCFSLTRLPNKLAYLSSLIELDLGGC 254

Query: 134 CKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
             L ++P+ L  + SL+ L++SG + + R  +    + +L+ L+ SGC       S    
Sbjct: 255 SSLTSLPNELANLSSLKRLNLSGCSNLTRSPNEFANLSSLKKLHLSGC-------SSLTS 307

Query: 193 LPFNLLGKSS--------CPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
           LP  L   SS        C     LP+ L  + SL +LDL+DC     ++ + ++NL SL
Sbjct: 308 LPNELANISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDCS-SLTSLQNKLENLSSL 366

Query: 244 KELYLNR-NNFVTLPASISGLLNLEELE--LEDCKRLQSLPQIPPN---LQFVRANGCSS 297
           KEL L+  +N   LP  ++   +L  L+  L  C  L SLP    N   L+ +  +GCSS
Sbjct: 367 KELNLSGCSNLTNLPKELANFSSLTRLKHNLSGCSNLISLPNELENLSSLEDLNLSGCSS 426

Query: 298 LVTL 301
           L +L
Sbjct: 427 LTSL 430



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 30/305 (9%)

Query: 2   ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++  L  L + G +S+   P+ +E L+ L+ + LK C NL+ LP  +++L  L  L+LS
Sbjct: 1   TNLNSLKTLNMSGCSSLISFPNELENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLS 60

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           GCS L   P  +A++  L++L L G +S+  + + +  +  L+ LYLN C NL RLP+ +
Sbjct: 61  GCSSLTSLPNELANLSSLTRLDLSGCSSLIILLNELANISSLKKLYLNNCSNLTRLPNKL 120

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFS 178
             L SL+ + L  C  L ++P+ L  + SL ELD+ G  ++    + +  + +L+ L  S
Sbjct: 121 TKLFSLEGIFLHHCSSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLNLS 180

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           GC       S  + LP                 L  + SL +L L+ C L   ++P+++ 
Sbjct: 181 GC-------SSLISLP---------------NELANISSLDELYLNGC-LSLISLPNELA 217

Query: 239 NLHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR---ANG 294
           NL SLK+LYLN    +T LP  ++ L +L EL+L  C  L SLP    NL  ++    +G
Sbjct: 218 NLSSLKKLYLNNCFSLTRLPNKLAYLSSLIELDLGGCSSLTSLPNELANLSSLKRLNLSG 277

Query: 295 CSSLV 299
           CS+L 
Sbjct: 278 CSNLT 282



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 159/291 (54%), Gaps = 11/291 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A +  L +L L G +S+T +P+ +  L+ L+ L L GC NL+  P   ++L  L+ L L
Sbjct: 240 LAYLSSLIELDLGGCSSLTSLPNELANLSSLKRLNLSGCSNLTRSPNEFANLSSLKKLHL 299

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGCS L   P  +A++  L +LYL G +S+  +P+ +  +  L  L LN+C +L  L + 
Sbjct: 300 SGCSSLTSLPNELANISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDCSSLTSLQNK 359

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL--DVSGTA--IRRPTSSIFLMKNLRS 174
           +  L SLK LNLSGC  L N+P  L    SL  L  ++SG +  I  P + +  + +L  
Sbjct: 360 LENLSSLKELNLSGCSNLTNLPKELANFSSLTRLKHNLSGCSNLISLP-NELENLSSLED 418

Query: 175 LYFSGCNEPPASASWHLHL-PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAA 232
           L  SGC+   +  +   +L  F  L  SSC     LP+ L  + SL +L LS C     +
Sbjct: 419 LNLSGCSSLTSLPNELANLSSFERLYLSSCSSLTSLPNELANLSSLERLYLSGCS-SLTS 477

Query: 233 IPSDIDNLHSLKELYLN-RNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +P+ ++NL SLK LY N  ++  +LP  ++ L +L++  L +C  L SLP 
Sbjct: 478 LPNGLENLSSLKVLYFNGYSSLTSLPNKLANLSSLKKFYLNNCSSLTSLPN 528



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 133/267 (49%), Gaps = 45/267 (16%)

Query: 49  SSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNE 108
           ++L  L+TL +SGCS L  FP     +E+LS                     L+ +YL  
Sbjct: 1   TNLNSLKTLNMSGCSSLISFPN---ELENLS--------------------SLKNIYLKN 37

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
           C NL RLP+ +  L  L+ L+LSGC  L ++P+ L  + SL  LD+SG       SS+ +
Sbjct: 38  CSNLTRLPNKLTNLSVLEELDLSGCSSLTSLPNELANLSSLTRLDLSG------CSSLII 91

Query: 169 MKN-------LRSLYFSGCNEPPASASWHLHLPFNLLG--KSSCPVALMLPS-LTGVCSL 218
           + N       L+ LY + C+      +    L F+L G     C     LP+ L  + SL
Sbjct: 92  LLNELANISSLKKLYLNNCSNLTRLPNKLTKL-FSLEGIFLHHCSSLTSLPNELAHLSSL 150

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRL 277
            +LDL  C L   ++P+++ NL SLK+L L+  ++ ++LP  ++ + +L+EL L  C  L
Sbjct: 151 IELDLGGC-LSLTSLPNELANLSSLKKLNLSGCSSLISLPNELANISSLDELYLNGCLSL 209

Query: 278 QSLPQIPPNLQFVRA---NGCSSLVTL 301
            SLP    NL  ++    N C SL  L
Sbjct: 210 ISLPNELANLSSLKKLYLNNCFSLTRL 236



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 25/148 (16%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L++L L GC +L  LP  ++ L  L  LNLSG S     P   ++   L ++HL G 
Sbjct: 243 LSSLIELDLGGCSSLTSLPNELANLSSLKRLNLSGCSNLTRSPNEFANLSSLKKLHLSGC 302

Query: 739 ------------------------TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING 774
                                   +++  LP  +  +S  +  +L DC +L SL + +  
Sbjct: 303 SSLTSLPNELANISSLDELYLSGCSSLTSLPNELANISSLLRLDLNDCSSLTSLQNKLEN 362

Query: 775 LRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L SL+ +  SGCS L N+ + L    SL
Sbjct: 363 LSSLKELNLSGCSNLTNLPKELANFSSL 390



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 7/165 (4%)

Query: 647 CSRLWEEADEFPDIVQVL----SDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  +I  +L    +D + +  L   +E L  L +L L+GC NL  LP+ ++
Sbjct: 326 CSSLTSLPNELANISSLLRLDLNDCSSLTSLQNKLENLSSLKELNLSGCSNLTNLPKELA 385

Query: 703 ALKYLSTL--NLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
               L+ L  NLSG S     P    +   L +++L G +++  LP  +  LS      L
Sbjct: 386 NFSSLTRLKHNLSGCSNLISLPNELENLSSLEDLNLSGCSSLTSLPNELANLSSFERLYL 445

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             C +L SLP+ +  L SL  +Y SGCS L ++   L  + SL+V
Sbjct: 446 SSCSSLTSLPNELANLSSLERLYLSGCSSLTSLPNGLENLSSLKV 490



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 5/164 (3%)

Query: 645 GNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           G C  L    +E  ++  +    LS  + +  L   +  +  L +L LNGC +L  LP  
Sbjct: 156 GGCLSLTSLPNELANLSSLKKLNLSGCSSLISLPNELANISSLDELYLNGCLSLISLPNE 215

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           ++ L  L  L L+        P   +    L+E+ L G +++  LP  +  LS     NL
Sbjct: 216 LANLSSLKKLYLNNCFSLTRLPNKLAYLSSLIELDLGGCSSLTSLPNELANLSSLKRLNL 275

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             C NL   P+    L SL+ ++ SGCS L ++   L  + SL+
Sbjct: 276 SGCSNLTRSPNEFANLSSLKKLHLSGCSSLTSLPNELANISSLD 319



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 5/164 (3%)

Query: 645 GNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
            NCS L    ++   +  +    L   + +  L   +  L  L++L L GC +L  LP  
Sbjct: 108 NNCSNLTRLPNKLTKLFSLEGIFLHHCSSLTSLPNELAHLSSLIELDLGGCLSLTSLPNE 167

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNL 759
           ++ L  L  LNLSG S     P   ++   L E++L G  ++  LP  +  LS      L
Sbjct: 168 LANLSSLKKLNLSGCSSLISLPNELANISSLDELYLNGCLSLISLPNELANLSSLKKLYL 227

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +C +L  LP+ +  L SL  +   GCS L ++   L  + SL+
Sbjct: 228 NNCFSLTRLPNKLAYLSSLIELDLGGCSSLTSLPNELANLSSLK 271



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-A 740
            L +L LN C NL RLP  ++ L  L  + L   S     P   +    L+E+ L G  +
Sbjct: 101 SLKKLYLNNCSNLTRLPNKLTKLFSLEGIFLHHCSSLTSLPNELAHLSSLIELDLGGCLS 160

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  LP  +  LS     NL  C +L SLP+ +  + SL  +Y +GC  L ++   L  + 
Sbjct: 161 LTSLPNELANLSSLKKLNLSGCSSLISLPNELANISSLDELYLNGCLSLISLPNELANLS 220

Query: 801 SLE 803
           SL+
Sbjct: 221 SLK 223



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 29/186 (15%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  +    L + +++  L   +  L  L +L L+GC +L  LP  ++
Sbjct: 14  CSSLISFPNELENLSSLKNIYLKNCSNLTRLPNKLTNLSVLEELDLSGCSSLTSLPNELA 73

Query: 703 ALKYLSTLNLSGLSK----FREFPEITSSRDQLLE---------------IHLEG----- 738
            L  L+ L+LSG S       E   I+S +   L                  LEG     
Sbjct: 74  NLSSLTRLDLSGCSSLIILLNELANISSLKKLYLNNCSNLTRLPNKLTKLFSLEGIFLHH 133

Query: 739 -TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
            +++  LP  +  LS  I  +L  C +L SLP+ +  L SL+ +  SGCS L ++   L 
Sbjct: 134 CSSLTSLPNELAHLSSLIELDLGGCLSLTSLPNELANLSSLKKLNLSGCSSLISLPNELA 193

Query: 798 KVESLE 803
            + SL+
Sbjct: 194 NISSLD 199


>gi|147774169|emb|CAN63551.1| hypothetical protein VITISV_032106 [Vitis vinifera]
          Length = 924

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 156/297 (52%), Gaps = 39/297 (13%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE L L GC +L SLP  I  LK L TL  SGCSKL  FP+I  ++  L  L LD T+I 
Sbjct: 657 LEELILSGCVSLESLPGDIHKLKHLLTLHCSGCSKLTSFPKIKCNIGKLEVLSLDETAIK 716

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           E+PSSIELL GL  LYL+ CKNL  LP+SI  L+ L+ L+L GC KL+ +P+ L ++  L
Sbjct: 717 ELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCL 776

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           E L ++  + + P+ S   +  LR LY   CN  P                       ++
Sbjct: 777 EVLSLNSLSCQLPSLS--GLSLLRELYLDQCNLTPG----------------------VI 812

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN------FVTLPASISGL 263
            S   + +L +L L +C L    +   I +L SL+ L L+R+N         +   IS L
Sbjct: 813 KSDNCLNALKELRLRNCNLN-GGVFHCIFHLSSLEVLDLSRSNPEEGGTLSDILVGISQL 871

Query: 264 LNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDS 320
            NL  L+L  C +L  +P++P +L+ +  +  SS+ T    +      ++++NC+ S
Sbjct: 872 SNLRALDLSHCMKLSQIPELPSSLRLLDMH--SSIGTSLPPM------HSLVNCLKS 920



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 77/122 (63%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L+GC +LE LP  I  LK+L TL+ SG SK   FP+I  +  +L  + L+ TAI+
Sbjct: 657 LEELILSGCVSLESLPGDIHKLKHLLTLHCSGCSKLTSFPKIKCNIGKLEVLSLDETAIK 716

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+SIELL G     L +CKNL+ LP++I  LR L ++   GCSKL  + E L ++  L
Sbjct: 717 ELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCL 776

Query: 803 EV 804
           EV
Sbjct: 777 EV 778



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 89/180 (49%), Gaps = 8/180 (4%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L LD T+I E+PSSIELL GL  L L  CKNL  LP +I +L+ L  L L GCSKL 
Sbjct: 705 LEVLSLDETAIKELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLD 764

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
           + P+ +  M  L  L L+  S      S   L  L  LYL++C     +  S N L +LK
Sbjct: 765 RLPEDLERMPCLEVLSLNSLSCQLPSLSGLSL--LRELYLDQCNLTPGVIKSDNCLNALK 822

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVS------GTAIRRPTSSIFLMKNLRSLYFSGC 180
            L L  C     V   +  + SLE LD+S      G  +      I  + NLR+L  S C
Sbjct: 823 ELRLRNCNLNGGVFHCIFHLSSLEVLDLSRSNPEEGGTLSDILVGISQLSNLRALDLSHC 882



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDI------VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L      FP I      ++VLS D T I+EL  +IELL GL  L L+ CKNLE LP 
Sbjct: 689 CSKL----TSFPKIKCNIGKLEVLSLDETAIKELPSSIELLEGLRNLYLDNCKNLEGLPN 744

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  L++L  L+L G SK    PE
Sbjct: 745 SICNLRFLEVLSLEGCSKLDRLPE 768


>gi|296089531|emb|CBI39350.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/157 (47%), Positives = 98/157 (62%), Gaps = 2/157 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L L G TS+ EV  SI  L  L  L L+GCK L S   +I  ++ L+ L L
Sbjct: 539 FSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTL 597

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKLKKFP+I  +ME L +L+LDG+ I E+PSSI  L GL  L L  CK L  LP S 
Sbjct: 598 SGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSF 657

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             L SL+TL L GC +L+++PD LG ++ L EL+  G
Sbjct: 658 CELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADG 694



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 2/146 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++  G T + E+  +I  L  L+ L L GCK L+    +I  ++ L  L LSG S
Sbjct: 543 PNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIH-MESLQILTLSGCS 601

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K ++FPEI  + + L+E+ L+G+ I  LP+SI  L+G +  NLK+CK L SLP +   L 
Sbjct: 602 KLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELT 661

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
           SLR +   GCS+LK++ + LG ++ L
Sbjct: 662 SLRTLTLCGCSELKDLPDNLGSLQCL 687



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 131/298 (43%), Gaps = 46/298 (15%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   +    +  E + G+  L L   K L+      + +K LR L++          QI 
Sbjct: 417 DINHVLTTNTGTEAVEGI-FLDLSASKELNFSIDAFTKMKRLRLLKICNV-------QID 468

Query: 73  ASMEDLSK---LYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP-SSINGLKSLKTL 128
            S+  LSK   LY  G  +   PS+    P  +L+ LN C + ++ P     G + LK++
Sbjct: 469 RSLGYLSKKEDLYWHGYPLKSFPSNFH--PE-KLVELNMCFSRLKQPWEGKKGFEKLKSI 525

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPA-S 186
            LS    L  +PD  G V +L  L + G T++     SI  +K L  L   GC +  + S
Sbjct: 526 KLSHSQHLTKIPDFSG-VPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFS 584

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
           +S H+              +L + +L+G   L K             P   +N+ SL EL
Sbjct: 585 SSIHME-------------SLQILTLSGCSKLKKF------------PEIQENMESLMEL 619

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           +L+ +  + LP+SI  L  L  L L++CK+L SLPQ    L  +R     GCS L  L
Sbjct: 620 FLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDL 677



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 11/99 (11%)

Query: 647 CSRLWEEADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L     +FP+I       +++  DG+ I EL  +I  L GLV L L  CK L  LP+
Sbjct: 600 CSKL----KKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQ 655

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           +   L  L TL L G S+ ++ P+   S   L E++ +G
Sbjct: 656 SFCELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADG 694


>gi|357500727|ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula]
 gi|355495667|gb|AES76870.1| Elongation factor Ts [Medicago truncatula]
          Length = 2436

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 198/444 (44%), Gaps = 48/444 (10%)

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            CS +K+  +    + +L KL L G+   E        P LE L L  CKNLV L  SI  
Sbjct: 611  CSNIKQLWKNKKYLRNLRKLDLMGSINLEKIIDFGEFPNLEWLDLELCKNLVELDPSIGL 670

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSG 179
            L+ L  LNL GC KL  +  ++G +  L  L+V      +  P ++IF + +L  L  +G
Sbjct: 671  LRKLVYLNLGGCKKLVELDPSIGLLRKLVCLNVKDCENLVSIP-NNIFDLSSLEYLNMNG 729

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C     S  ++  LP      S      +LPSL  +  L  +D+S C L +  +P  I++
Sbjct: 730  C-----SKVFNNSLP------SPTRHTYLLPSLHSLDCLRGVDISFCNLSQ--VPDAIED 776

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            LH L+ L L  NNFVTLP S+  L  L  L LE CK L+SLPQ+P      R    +   
Sbjct: 777  LHWLERLNLKGNNFVTLP-SLRKLSELVYLNLEHCKLLESLPQLPSPTTIGRERDENDDD 835

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
             + G +        I NC    +  R + +  S + +++    +++P     IV PGS+I
Sbjct: 836  WISGLV--------IFNCSKLGERERCSSMTFSWMIQFI----LANPQSTSQIVIPGSEI 883

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICC-VF-QVPKHSTGTYLFHSYPAHELEC 417
            P W   Q  G SI +     +++ N    + +CC VF  VP+ S    L           
Sbjct: 884  PSWINNQCVGDSIQIDLSPAMHDNNNQSHYFVCCAVFTMVPQLSANMLLIFD-------- 935

Query: 418  SMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGH----NWQFESNLIRLSFRSISDPT- 472
              + S     I          S HLW+ ++PR  +    N  F+  +  +    I +   
Sbjct: 936  --NSSIMWIPISINRDLVTTESSHLWIAYIPRDSYPENGNMYFKMEISIIKLLGIEESEG 993

Query: 473  --WKVKRCGFHPIYMHEVEEFDET 494
              ++VK CG+  +   ++ + + T
Sbjct: 994  LGFEVKSCGYRWVCKQDLRKLNFT 1017



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 34/187 (18%)

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
             P LE L L  C NLV L  SI  L+ L  LNL GC  L ++P+ +  + SLE+L++ G 
Sbjct: 2012 FPNLEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGC 2071

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
            +    +SSI L   +R+ Y                               +LPS+  +  
Sbjct: 2072 SKAFSSSSIMLPTPMRNTY-------------------------------LLPSVHSLNC 2100

Query: 218  LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            L K+D+S C L +  +P  I+ LHSL++L L  N+FVTLP S+  L  L  L LE CK L
Sbjct: 2101 LRKVDISFCHLNQ--VPDSIECLHSLEKLNLGGNDFVTLP-SLRKLSKLVYLNLEHCKFL 2157

Query: 278  QSLPQIP 284
            +S PQ+P
Sbjct: 2158 KSFPQLP 2164



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 19/160 (11%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL--------KKF 68
           + E+  SI LL  L  L +K C+NL S+P  I  L  L  L ++GCSK+         + 
Sbjct: 685 LVELDPSIGLLRKLVCLNVKDCENLVSIPNNIFDLSSLEYLNMNGCSKVFNNSLPSPTRH 744

Query: 69  PQIVASMEDLSKLY---LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
             ++ S+  L  L    +   ++++VP +IE L  LE L L +  N V LP S+  L  L
Sbjct: 745 TYLLPSLHSLDCLRGVDISFCNLSQVPDAIEDLHWLERLNL-KGNNFVTLP-SLRKLSEL 802

Query: 126 KTLNLSGCCKLENVPD-----TLGKVESLEELD-VSGTAI 159
             LNL  C  LE++P      T+G+     + D +SG  I
Sbjct: 803 VYLNLEHCKLLESLPQLPSPTTIGRERDENDDDWISGLVI 842



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 48/106 (45%), Gaps = 23/106 (21%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L  CKNL  L  +I  L+ L  LNL G  K  E                       L 
Sbjct: 653 LDLELCKNLVELDPSIGLLRKLVYLNLGGCKKLVE-----------------------LD 689

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
            SI LL   +  N+KDC+NL S+P+ I  L SL  +  +GCSK+ N
Sbjct: 690 PSIGLLRKLVCLNVKDCENLVSIPNNIFDLSSLEYLNMNGCSKVFN 735



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 24/130 (18%)

Query: 659  DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF 718
            D+V+++   +DI++L    + L  L +L L   +NLE++                    F
Sbjct: 1968 DLVELILMYSDIKQLWKNKKYLPNLRRLDLRHSRNLEKI------------------VDF 2009

Query: 719  REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
             EFP +     + L + L    +  L  SI LL   +  NL+ C NL S+P+ I+GL SL
Sbjct: 2010 GEFPNL-----EWLNLELCANLVE-LDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSL 2063

Query: 779  RMMYPSGCSK 788
              +   GCSK
Sbjct: 2064 EDLNICGCSK 2073



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 60/152 (39%), Gaps = 39/152 (25%)

Query: 656  EFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
            EFP++  + L    ++ EL  +I LL  LV L L GC NL  +P  IS L  L  LN+ G
Sbjct: 2011 EFPNLEWLNLELCANLVELDPSIGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICG 2070

Query: 715  LSK-------------------------------------FREFPEITSSRDQLLEIHLE 737
             SK                                       + P+       L +++L 
Sbjct: 2071 CSKAFSSSSIMLPTPMRNTYLLPSVHSLNCLRKVDISFCHLNQVPDSIECLHSLEKLNLG 2130

Query: 738  GTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            G     LP S+  LS  +  NL+ CK LKS P
Sbjct: 2131 GNDFVTLP-SLRKLSKLVYLNLEHCKFLKSFP 2161


>gi|82542039|gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1120

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 171/355 (48%), Gaps = 27/355 (7%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           NL  L      L  L+ L LS    L K P + +S   L KL L+G +S+ EV  SIE L
Sbjct: 612 NLKELWKGKKILDKLKILNLSHSQHLIKTPDLHSS--SLEKLILEGCSSLVEVHQSIENL 669

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L  L L  C +L  LP SI+ +KSL+TLN+SGC ++E +P+ +G +E L EL   G  
Sbjct: 670 TSLVFLNLKGCWSLKTLPESIDNVKSLETLNISGCSQVEKLPERMGDMEFLTELLADGIE 729

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCS 217
             +  SSI  +K+ R L   G +  P S+S        L+          LP S     S
Sbjct: 730 NEQFLSSIGQLKHCRRLSLCGDSSTPPSSS--------LISTGVLNWKRWLPASFIEWIS 781

Query: 218 LTKLDLSDCGLGEAAIP-SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           +  L+LS+ GL + A    D   L +L++L L+ N F +LP+ I  L  L EL ++ CK 
Sbjct: 782 VKHLELSNSGLSDRATNCVDFSGLSALEKLTLDGNKFSSLPSGIGFLSELRELSVKGCKY 841

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK-NGLAISMLR 335
           L S+P +P +L+ + A  C SL  +    +  +  Y  ++   SL+  +   GL+ S   
Sbjct: 842 LVSIPDLPSSLKRLGACDCKSLKRVRIPSEPKKELYIFLDESHSLEEFQDIEGLSNSFWY 901

Query: 336 EYLE-------------LQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRP 377
             ++             ++A+ +  H   I     Q+P W  Y+ EG S++   P
Sbjct: 902 IRVDDRSHSPSKLQKSVVEAMCNGRHGYFIRHTPGQMPNWMSYRGEGRSLSFHIP 956



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 93/193 (48%), Gaps = 20/193 (10%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L+G +S+ EV  SIE LT L  L LKGC +L +LP +I ++K L TL +SGCS++
Sbjct: 648 LEKLILEGCSSLVEVHQSIENLTSLVFLNLKGCWSLKTLPESIDNVKSLETLNISGCSQV 707

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--------------NECKN 111
           +K P+ +  ME L++L  DG    +  SSI  L     L L                  N
Sbjct: 708 EKLPERMGDMEFLTELLADGIENEQFLSSIGQLKHCRRLSLCGDSSTPPSSSLISTGVLN 767

Query: 112 LVR-LPSSINGLKSLKTLNLSGCC---KLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
             R LP+S     S+K L LS      +  N  D  G + +LE+L + G       S I 
Sbjct: 768 WKRWLPASFIEWISVKHLELSNSGLSDRATNCVDFSG-LSALEKLTLDGNKFSSLPSGIG 826

Query: 168 LMKNLRSLYFSGC 180
            +  LR L   GC
Sbjct: 827 FLSELRELSVKGC 839



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 61/228 (26%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRE-LSLAIEL----------- 679
           GR+ VR   P+EPG  +R+W + D +  + Q    GT++ E L L +             
Sbjct: 497 GREVVRESPPKEPGKRTRIWNQEDAWNVLQQ--QKGTEVVEGLKLDVRASETKSLSTGSF 554

Query: 680 --LFGLVQLTLNGCK------------------------------------------NLE 695
             + GL  L +NG                                            NL+
Sbjct: 555 AKMKGLNLLQINGAHLTGSFKLLSKELMWICWHEFPLKYFPSDFTLDNLAVLDMQYSNLK 614

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGN 754
            L +    L  L  LNLS      + P++ SS   L ++ LEG +++  +  SIE L+  
Sbjct: 615 ELWKGKKILDKLKILNLSHSQHLIKTPDLHSS--SLEKLILEGCSSLVEVHQSIENLTSL 672

Query: 755 ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +  NLK C +LK+LP +I+ ++SL  +  SGCS+++ + E +G +E L
Sbjct: 673 VFLNLKGCWSLKTLPESIDNVKSLETLNISGCSQVEKLPERMGDMEFL 720



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L   + + E+  +IE L  LV L L GC +L+ LP +I  +K L TLN+SG S+  + P
Sbjct: 652 ILEGCSSLVEVHQSIENLTSLVFLNLKGCWSLKTLPESIDNVKSLETLNISGCSQVEKLP 711

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
           E     + L E+  +G       +SI          LK C+ L
Sbjct: 712 ERMGDMEFLTELLADGIENEQFLSSI--------GQLKHCRRL 746



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + +  L  L LDG   + +PS I  L+ L  L++KGCK L S+P   SSLK L   +  
Sbjct: 802 FSGLSALEKLTLDGNKFSSLPSGIGFLSELRELSVKGCKYLVSIPDLPSSLKRLGACD-- 859

Query: 61  GCSKLKK 67
            C  LK+
Sbjct: 860 -CKSLKR 865


>gi|154424272|gb|ABS82021.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 187/375 (49%), Gaps = 39/375 (10%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ E+PSSI  +T L  L L  C +L  LP +I +L  L+ L L+ CS L K P    ++
Sbjct: 692  SLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNV 751

Query: 76   EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
              L +L L G +S+ E+PSSI  +  L+ LY + C +LV+LPSSI    +LK L+L  C 
Sbjct: 752  TSLKELNLSGCSSLLEIPSSIGNIVNLKKLYADGCSSLVQLPSSIGNNTNLKELHLLNCS 811

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
             L   P ++  +  LE+L++SG        SI  + NL+SLY S C       S  + LP
Sbjct: 812  SLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDC-------SSLMELP 864

Query: 195  FNL--------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
            F +        L    C   L LP S+  + +L  L L+ C      +PS ++N  +L+ 
Sbjct: 865  FTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCS-SLKELPSLVENAINLQS 923

Query: 246  LYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSL-----PQIPPNLQFVRANGCSSLV 299
            L L + ++ V LP+SI  + NL  L++ +C  L  L     P +P +L  + A  C SLV
Sbjct: 924  LSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLVELNLVSHPVVPDSL-ILDAGDCESLV 982

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
                     ++   ++N  +  KL   N  A  ++   ++  A  +       + PG ++
Sbjct: 983  QRLDC--FFQNPKIVLNFANCFKL---NQEARDLI---IQTSACRNA------ILPGEKV 1028

Query: 360  PKWFMYQNEGSSITV 374
            P +F Y+  G S+TV
Sbjct: 1029 PAYFTYRATGDSLTV 1043



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 140/280 (50%), Gaps = 30/280 (10%)

Query: 28  TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS 87
           T L+ L L  C +L  LP +I ++  L  L+L  CS L K P  + ++ +L K       
Sbjct: 680 TNLQELRLINCLSLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKK------- 732

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
                           L+LN C +LV+LPSS   + SLK LNLSGC  L  +P ++G + 
Sbjct: 733 ----------------LFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIV 776

Query: 148 SLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPV 205
           +L++L   G +++ +  SSI    NL+ L+   C+      S  L+L     L  S C  
Sbjct: 777 NLKKLYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLS 836

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLL 264
            + LPS+  V +L  L LSDC      +P  I+N  +L  LYL+  +N + LP+SI  + 
Sbjct: 837 LVKLPSIGNVINLQSLYLSDCS-SLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNIT 895

Query: 265 NLEELELEDCKRLQSLPQI---PPNLQFVRANGCSSLVTL 301
           NL+ L L  C  L+ LP +     NLQ +    CSSLV L
Sbjct: 896 NLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVEL 935



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++ +L  LY DG +S+ ++PSSI   T L+ L L  C +L   P ++ +L  L  L L
Sbjct: 772 IGNIVNLKKLYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNL 831

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC  L K P I  ++ +L  LYL D +S+ E+P +IE    L+ LYL+ C NL+ LPSS
Sbjct: 832 SGCLSLVKLPSI-GNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSS 890

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I  + +L++L L+GC  L+ +P  +    +L+ L +   +++    SSI+ + NL  L  
Sbjct: 891 IWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDV 950

Query: 178 SGCN 181
           S C+
Sbjct: 951 SNCS 954



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 16/168 (9%)

Query: 646 NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NC  L E      ++  +L     D + + +L  +I  L  L +L LN C +L +LP + 
Sbjct: 689 NCLSLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSF 748

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK 760
             +  L  LNLSG S   E P    +   L +++ +G +++  LP+SI    GN  +NLK
Sbjct: 749 GNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKLYADGCSSLVQLPSSI----GNN-TNLK 803

Query: 761 D-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +     C +L   PS++  L  L  +  SGC  L  +  ++G V +L+
Sbjct: 804 ELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLP-SIGNVINLQ 850



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 6/151 (3%)

Query: 647 CSRLWEEADEFPDIV---QVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E      +IV   ++ +DG + + +L  +I     L +L L  C +L   P ++ 
Sbjct: 762 CSSLLEIPSSIGNIVNLKKLYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSML 821

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKD 761
            L  L  LNLSG     + P I +  + L  ++L + +++  LP +IE  +      L  
Sbjct: 822 NLTRLEDLNLSGCLSLVKLPSIGNVIN-LQSLYLSDCSSLMELPFTIENATNLDTLYLDG 880

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           C NL  LPS+I  + +L+ +Y +GCS LK +
Sbjct: 881 CSNLLELPSSIWNITNLQSLYLNGCSSLKEL 911



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD + + EL   IE    L  L L+GC NL  LP +I  +  L +L L+G S  +E P 
Sbjct: 854 LSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPS 913

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
           +  +   L  + L + +++  LP+SI  +S     ++ +C +L  L
Sbjct: 914 LVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLVEL 959



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 2/111 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLS 752
           LE+L      ++ L  ++LS     +E P+ +++ + L E+ L    ++  LP+SI  ++
Sbjct: 646 LEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATN-LQELRLINCLSLVELPSSIGNVT 704

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             +  +L DC +L  LPS+I  L +L+ ++ + CS L  +  + G V SL+
Sbjct: 705 NLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLK 755



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-I 741
           L  L L+GC +L +LP +I  +  L +L LS  S   E P    +   L  ++L+G + +
Sbjct: 826 LEDLNLSGCLSLVKLP-SIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNL 884

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP+SI  ++      L  C +LK LPS +    +L+ +    CS L  +  ++ ++ +
Sbjct: 885 LELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISN 944

Query: 802 L 802
           L
Sbjct: 945 L 945


>gi|105922557|gb|ABF81423.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1359

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 101/154 (65%), Gaps = 2/154 (1%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L +L L+G TS++EV  S+     L+ + L  CK++  LP  +  +  L+   L
Sbjct: 967  FTGIPNLKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MGSLKVCIL 1025

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             GCSKL+KFP IV +M  L+ L LDGT I ++ SS+  L GL LL +N CKNL  +PSSI
Sbjct: 1026 DGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSI 1085

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD 153
              LKSLK L+LSGC +L+ +P+ LGKVESLEELD
Sbjct: 1086 GCLKSLKKLDLSGCSELKYIPEKLGKVESLEELD 1119



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 658  PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P++  ++ +G T + E+  ++     L  + L  CK++  LP  +  +  L    L G S
Sbjct: 971  PNLKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNLE-MGSLKVCILDGCS 1029

Query: 717  KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
            K  +FP+I  + + L  + L+GT I  L +S+  L G  L ++ +CKNL+S+PS+I  L+
Sbjct: 1030 KLEKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPSSIGCLK 1089

Query: 777  SLRMMYPSGCSKLKNVTETLGKVESLE 803
            SL+ +  SGCS+LK + E LGKVESLE
Sbjct: 1090 SLKKLDLSGCSELKYIPEKLGKVESLE 1116



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 28/195 (14%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            L+ + LS    L K P     + +L  L L+G TS++EV  S+     L+ + L  CK++
Sbjct: 950  LKIINLSNSLNLIKTPDFTG-IPNLKNLILEGCTSLSEVHPSLAHHKKLQYMNLVNCKSI 1008

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              LP+++  + SLK   L GC KLE  PD +G +  L  L + GT I + +SS+      
Sbjct: 1009 RILPNNLE-MGSLKVCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSM------ 1061

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEA 231
                             H  +   LL  ++C     +PS  G + SL KLDLS C     
Sbjct: 1062 -----------------HHLIGLGLLSMNNCKNLESIPSSIGCLKSLKKLDLSGCS-ELK 1103

Query: 232  AIPSDIDNLHSLKEL 246
             IP  +  + SL+EL
Sbjct: 1104 YIPEKLGKVESLEEL 1118



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 11/95 (11%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS+L    ++FPDIV  ++       DGT I +LS ++  L GL  L++N CKNLE +P 
Sbjct: 1028 CSKL----EKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIPS 1083

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
            +I  LK L  L+LSG S+ +  PE     + L E+
Sbjct: 1084 SIGCLKSLKKLDLSGCSELKYIPEKLGKVESLEEL 1118



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 98/255 (38%), Gaps = 71/255 (27%)

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--- 180
            +LK +NLS    L   PD  G                        + NL++L   GC   
Sbjct: 949  NLKIINLSNSLNLIKTPDFTG------------------------IPNLKNLILEGCTSL 984

Query: 181  NEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            +E   S + H  L + NL+   +C    +LP+   + SL    L  C   E   P  + N
Sbjct: 985  SEVHPSLAHHKKLQYMNLV---NCKSIRILPNNLEMGSLKVCILDGCSKLEK-FPDIVGN 1040

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            ++ L  L L+      L +S+  L+ L  L + +CK L+S+P                  
Sbjct: 1041 MNCLTVLRLDGTGITKLSSSMHHLIGLGLLSMNNCKNLESIP------------------ 1082

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLA-ISMLREYL-------ELQAVSDPGHKLS 351
                         + I C+ SLK L  +G + +  + E L       EL   S+P     
Sbjct: 1083 -------------SSIGCLKSLKKLDLSGCSELKYIPEKLGKVESLEELDCRSNPRPGFG 1129

Query: 352  IVFPGSQIPKWFMYQ 366
            I  PG++IP WF +Q
Sbjct: 1130 IAVPGNEIPGWFNHQ 1144



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 821 GKEIVRCESPEEPGRRSRLW----TYADVCLALMDNTGKEK----IEAIF----LDMPGI 868

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K  +    + S +  L  L ++ + +  E PE  S++                    DQL
Sbjct: 869 KESQWNMESFSKMSRLRLLKINNV-QLSEGPEDISNKLQFLEWHSYPLKSLPVGLQVDQL 927

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  ++I  L    +      + NL +  NL   P    G+ +L+ +   GC+ L  
Sbjct: 928 VELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPD-FTGIPNLKNLILEGCTSLSE 986

Query: 792 VTETLGKVESLE 803
           V  +L   + L+
Sbjct: 987 VHPSLAHHKKLQ 998


>gi|227438149|gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1084

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 180/366 (49%), Gaps = 37/366 (10%)

Query: 50  SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPG-LELLYLN 107
           SLK L+ L+LS   +L + P   + + +L KL+L +   +A+V  SI++L G L LL L+
Sbjct: 563 SLKELKYLDLSHSIQLTETPDF-SYLPNLEKLFLINCQRLAKVHESIKVLQGSLILLNLS 621

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSI 166
            C  L  LP  +  LK L+TL LSGC +LE + D LG++ESL  L    TAI + P+SS 
Sbjct: 622 GCIKLGELPLELYTLKLLETLILSGCSQLERLDDALGELESLTILKADYTAITQIPSSS- 680

Query: 167 FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSD 225
                L+ L   GC E      W      N     S  VAL+ P SL G+  L  L L  
Sbjct: 681 ---DQLKELSLHGCKE-----LWKDRQYTN--SDESSQVALLSPLSLNGLICLRTLRLGY 730

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
           C L +  +P ++ +L SL+EL L  NNF  L    +GL +L+ L+L++C  L+S+  +P 
Sbjct: 731 CNLSDELVPVNLGSLSSLEELDLQGNNFRNLQTDFAGLPSLQILKLDNCSELRSMFSLPK 790

Query: 286 NLQFVRANGCSSLVTLFGALKLCR--SKYTIINCID-----SLKLLRK---------NGL 329
            L+ + A  C+ L      LK C       + NC +      L+ L+          N +
Sbjct: 791 KLRSLYARNCTVLERT-PDLKECSVLQSLHLTNCYNLVETPGLEELKTVGVIHMEMCNNV 849

Query: 330 AISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGF 389
             S     ++  AV   G    +  PGS IP W  ++N   SI+ T P    N + +VGF
Sbjct: 850 PYSDRERIMQGWAVGANG---GVFVPGSTIPDWVNFKNGTRSISFTVPEPTLN-SVLVGF 905

Query: 390 AICCVF 395
            +   +
Sbjct: 906 TVWTTY 911



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 114/231 (49%), Gaps = 29/231 (12%)

Query: 17  ITEVPSSIELLTG-LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           + +V  SI++L G L LL L GC  L  LP+ + +LK L TL LSGCS+L++    +  +
Sbjct: 601 LAKVHESIKVLQGSLILLNLSGCIKLGELPLELYTLKLLETLILSGCSQLERLDDALGEL 660

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR----------------LPSSI 119
           E L+ L  D T+I ++PSS + L  L    L+ CK L +                 P S+
Sbjct: 661 ESLTILKADYTAITQIPSSSDQLKELS---LHGCKELWKDRQYTNSDESSQVALLSPLSL 717

Query: 120 NGLKSLKTLNLSGCCKL--ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
           NGL  L+TL L G C L  E VP  LG + SLEELD+ G   R   +    + +L+ L  
Sbjct: 718 NGLICLRTLRL-GYCNLSDELVPVNLGSLSSLEELDLQGNNFRNLQTDFAGLPSLQILKL 776

Query: 178 SGCNEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
             C+E  +  S    LP  L  L   +C V    P L     L  L L++C
Sbjct: 777 DNCSELRSMFS----LPKKLRSLYARNCTVLERTPDLKECSVLQSLHLTNC 823



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 24/203 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL-----------SSL----- 44
           +  ++ L+ L  D T+IT++PSS +    L+ L+L GCK L           SS      
Sbjct: 657 LGELESLTILKADYTAITQIPSSSD---QLKELSLHGCKELWKDRQYTNSDESSQVALLS 713

Query: 45  PVTISSLKCLRTLELSGCSKLKKF-PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           P++++ L CLRTL L  C+   +  P  + S+  L +L L G +   + +    LP L++
Sbjct: 714 PLSLNGLICLRTLRLGYCNLSDELVPVNLGSLSSLEELDLQGNNFRNLQTDFAGLPSLQI 773

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L L+ C  L  + S    L+SL   N   C  LE  PD L +   L+ L ++       T
Sbjct: 774 LKLDNCSELRSMFSLPKKLRSLYARN---CTVLERTPD-LKECSVLQSLHLTNCYNLVET 829

Query: 164 SSIFLMKNLRSLYFSGCNEPPAS 186
             +  +K +  ++   CN  P S
Sbjct: 830 PGLEELKTVGVIHMEMCNNVPYS 852



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 20/161 (12%)

Query: 676 AIELLFG-LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           +I++L G L+ L L+GC  L  LP  +  LK L TL LSG S+     +     + L  +
Sbjct: 607 SIKVLQGSLILLNLSGCIKLGELPLELYTLKLLETLILSGCSQLERLDDALGELESLTIL 666

Query: 735 HLEGTAIRGLPAS------------IELLSGNILSNLKDCKNLKSL-PSTING---LRSL 778
             + TAI  +P+S             EL      +N  +   +  L P ++NG   LR+L
Sbjct: 667 KADYTAITQIPSSSDQLKELSLHGCKELWKDRQYTNSDESSQVALLSPLSLNGLICLRTL 726

Query: 779 RMMYPSGCSKLKNVTETLGKVESL-EVRLSSWNRPKMQNDF 818
           R+ Y +   +L  V   LG + SL E+ L   N   +Q DF
Sbjct: 727 RLGYCNLSDEL--VPVNLGSLSSLEELDLQGNNFRNLQTDF 765


>gi|356514963|ref|XP_003526171.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 227/511 (44%), Gaps = 71/511 (13%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            ++ EVP+  E    L  L L GC  L  L  +I  L+ L  L L  C  L   P  V  +
Sbjct: 565  NLIEVPNFGEA-PNLASLNLCGCIRLRQLHSSIGLLRKLTILNLKECRSLTDLPHFVQGL 623

Query: 76   EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             +L +L L+G   + ++  SI  L  L +L L +C +LV +P++I GL SL+ L+LSGC 
Sbjct: 624  -NLEELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNTILGLNSLECLSLSGCS 682

Query: 135  KLENV--PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL--RSLYFSGCNEPPASASWH 190
            KL N+   + L     L++L +        +   FL K L   S+ F    E     S  
Sbjct: 683  KLYNIHLSEELRDARYLKKLRMGEAPSCSQSIFSFLKKWLPWPSMAFDKSLEDAHKDS-- 740

Query: 191  LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                          V  +LPSL  +  + +LDLS C L    IP    NLH L++L L  
Sbjct: 741  --------------VRCLLPSLPILSCMRELDLSFCNL--LKIPDAFGNLHCLEKLCLRG 784

Query: 251  NNFVTLPASISGLLNLEELELEDCKRLQSLPQIP-------PNLQFVRANGCSSLVTLFG 303
            NNF TLP S+  L  L  L L+ CKRL+ LP++P       P+   +R     +   + G
Sbjct: 785  NNFETLP-SLKELSKLLHLNLQHCKRLKYLPELPSRTDVPSPSSNKLRWTSVENEEIVLG 843

Query: 304  ALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK-----LSIVFPGSQ 358
                      I NC + ++      + +S + +   +QA S P        +S + PGS+
Sbjct: 844  --------LNIFNCPELVERDCCTSMCLSWMMQM--VQAFSKPKSPWWIPFISSIIPGSK 893

Query: 359  IPKWFMYQN--EGSSITVTRPS--YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHE 414
            IP+WF  Q+   G+ I +   S  ++ + N  +G A C V  VP H   T     +P   
Sbjct: 894  IPRWFDEQHLGMGNVIKIEHASDHFMQHHNNWIGIA-CSVIFVP-HKERTM---RHP--- 945

Query: 415  LECSMDGSGEGHYIY----FRGKFGHVVSDHLWLLFLPRHGHNW--QFESNLIRLSFRSI 468
             E   D S E    Y    FR       SDH+ L +  R    +   FE +       + 
Sbjct: 946  -ESFTDESDERPCFYIPLLFRKDLVTDESDHMLLFYYTRESFTFLTSFEHHDELKVVCAS 1004

Query: 469  SDPTW----KVKRCGFHPIYMHEVEEFDETT 495
            SDP      +VK+ G+  +Y H++E  + TT
Sbjct: 1005 SDPDQYFDVEVKKYGYRRVYRHDLELSNLTT 1035



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/193 (35%), Positives = 99/193 (51%), Gaps = 22/193 (11%)

Query: 617 MISVDSGCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL 673
           +I++  G +  +   +  G+  VR +SP+EP   SRLW+    F DI +V+SD   +  L
Sbjct: 500 LITISDGLIHMHDLLRDLGKCIVREKSPKEPRKWSRLWD----FEDIYKVMSDNMPLPNL 555

Query: 674 SLA--------IELL-FG----LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFRE 720
            L         IE+  FG    L  L L GC  L +L  +I  L+ L+ LNL       +
Sbjct: 556 RLLDVSNCKNLIEVPNFGEAPNLASLNLCGCIRLRQLHSSIGLLRKLTILNLKECRSLTD 615

Query: 721 FPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
            P      + L E++LEG   +R +  SI  L    + NLKDC +L S+P+TI GL SL 
Sbjct: 616 LPHFVQGLN-LEELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNTILGLNSLE 674

Query: 780 MMYPSGCSKLKNV 792
            +  SGCSKL N+
Sbjct: 675 CLSLSGCSKLYNI 687


>gi|224127242|ref|XP_002329435.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870485|gb|EEF07616.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 909

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 189/408 (46%), Gaps = 103/408 (25%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+TEVPSS++ L  LE + L  C NL S P+  S  K LR L +S C  + K P I  +
Sbjct: 480 SSLTEVPSSLQYLDKLEEIDLFSCYNLRSFPMLDS--KVLRKLVISRCLDVTKCPTISQN 537

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M     L L+ TSI EVP S+                             L+ L L+GC 
Sbjct: 538 M---VWLQLEQTSIKEVPQSVT--------------------------SKLERLCLNGCP 568

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           ++   P+  G +E LE   + GT I+   SSI  +  LR L  SGC++  +         
Sbjct: 569 EITKFPEISGDIERLE---LKGTTIKEVPSSIQFLTRLRDLDMSGCSKLES--------- 616

Query: 195 FNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                          P +TG + SL +L+LS  G+ +  IPS                  
Sbjct: 617 --------------FPEITGPMKSLVELNLSKTGIKK--IPS------------------ 642

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
               +S   +++L  L+L D   ++ LP++PP+L  +  + C+SL T+   +K+ RS + 
Sbjct: 643 ----SSFKHMISLRRLKL-DGTPIKELPELPPSLWILTTHDCASLETVISIIKI-RSLWD 696

Query: 314 IINCIDSLKLLRKNGLAISMLREYLELQAVSD-PGHKLSIVFPGSQIPKWFMYQNEGSSI 372
           +++  +  KL +K  +A      +L++Q+    P   + +V PGS+IP+WF  +  GSS+
Sbjct: 697 VLDFTNCFKLDQKPLVAAM----HLKIQSGDKIPHGGIKMVLPGSEIPEWFGEKGIGSSL 752

Query: 373 TVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD 420
           T+  PS   N +++ G A C VF +P            P+H++   +D
Sbjct: 753 TMQLPS---NCHQLKGIAFCLVFLLP-----------LPSHDMPYKVD 786



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 8/165 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L GT+I EVPSSI+ LT L  L + GC  L S P     +K L  L LS  + +
Sbjct: 579 DIERLELKGTTIKEVPSSIQFLTRLRDLDMSGCSKLESFPEITGPMKSLVELNLSK-TGI 637

Query: 66  KKFP-QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           KK P      M  L +L LDGT I E+P   EL P L +L  ++C +L  + S I     
Sbjct: 638 KKIPSSSFKHMISLRRLKLDGTPIKELP---ELPPSLWILTTHDCASLETVISIIKIRSL 694

Query: 125 LKTLNLSGCCKLENVPDTLG---KVESLEELDVSGTAIRRPTSSI 166
              L+ + C KL+  P       K++S +++   G  +  P S I
Sbjct: 695 WDVLDFTNCFKLDQKPLVAAMHLKIQSGDKIPHGGIKMVLPGSEI 739



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 16/134 (11%)

Query: 653 EADEFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           E  +FP    DI ++   GT I+E+  +I+ L  L  L ++GC  LE  P     +K L 
Sbjct: 569 EITKFPEISGDIERLELKGTTIKEVPSSIQFLTRLRDLDMSGCSKLESFPEITGPMKSLV 628

Query: 709 TLNLS--GLSKF--REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
            LNLS  G+ K     F  + S R     + L+GT I+ LP   EL     +    DC +
Sbjct: 629 ELNLSKTGIKKIPSSSFKHMISLR----RLKLDGTPIKELP---ELPPSLWILTTHDCAS 681

Query: 765 LKSLPSTINGLRSL 778
           L+++ S I  +RSL
Sbjct: 682 LETVISIIK-IRSL 694



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           +++ +P+++++   L  L L+G  +  +FPEI+   ++L    L+GT I+ +P+SI+ L+
Sbjct: 547 SIKEVPQSVTS--KLERLCLNGCPEITKFPEISGDIERL---ELKGTTIKEVPSSIQFLT 601

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSL 778
                ++  C  L+S P     ++SL
Sbjct: 602 RLRDLDMSGCSKLESFPEITGPMKSL 627


>gi|255558310|ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223540674|gb|EEF42237.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1349

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 195/415 (46%), Gaps = 58/415 (13%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKC------- 53
            +  +  L +L LD + + E+P SI  L+ LE+L L  CK+L ++P +IS+L+        
Sbjct: 796  IGKLTSLQELSLDSSGLEEIPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLRLG 855

Query: 54   ----------------LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                            L++L +S C  L K P  +  +  L +L+L+GTS+ E+P  +  
Sbjct: 856  SSSIEELPASIGSLCHLKSLSVSHCQSLSKLPDSIGGLASLVELWLEGTSVTEIPDQVGT 915

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG- 156
            L  L  L++  C +L  LP SI  + +L TL L     +  +P+++  +ESL  L ++  
Sbjct: 916  LSMLRKLHIGNCMDLRFLPESIGKMLNLTTLILD-YSMISELPESIEMLESLSTLMLNKC 974

Query: 157  TAIRRPTSSIFLMKNLRSLYF--SGCNEPPASAS-------WHLHLPFNLLGKSSCPVAL 207
              ++R  +SI  +K L+ LY   +  +E P           W +  P     +     A 
Sbjct: 975  KQLQRLPASIGNLKRLQHLYMEETSVSELPDEMGMLSNLMIWKMRKPHT---RQLQDTAS 1031

Query: 208  MLP-SLTGVCSLTKLDLSDCGLG-EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            +LP SL+ +  L  LD   CG     A+P + D L SL+ L  + N+   LP+ + GL  
Sbjct: 1032 VLPKSLSNLSLLEHLDA--CGWAFFGAVPDEFDKLSSLQTLNFSHNSICCLPSRLRGLSI 1089

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL----------CRSKYTI- 314
            L+ L L DCK+L+SLP +P +L  +    C++L ++     L          C     I 
Sbjct: 1090 LKNLILADCKQLKSLPLLPSSLVNLIVANCNALESVCDLANLQSLQDLDLTNCNKIMDIP 1149

Query: 315  -INCIDSLKLLRKNG--LAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             + C+ SL+ L   G       +++ L   A+      L++  PG  +P WF+ +
Sbjct: 1150 GLECLKSLRRLYMTGCFACFPAVKKRLAKVALK---RLLNLSMPGRVLPNWFVQE 1201



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 143/301 (47%), Gaps = 33/301 (10%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++ ++  S+  L  L  L LKGC NL+  P  +S LK L  L+L+GC K+K+ P  + SM
Sbjct: 693 ALVQIHKSVGDLKKLIHLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSM 752

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC-----------------------KNL 112
           ++L +L LD T+I ++P SI  L  L  L L  C                         L
Sbjct: 753 KNLRELLLDETAIVKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELSLDSSGL 812

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             +P SI  L +L+ LNL+ C  L  +PD++  +ESL +L +  ++I    +SI  + +L
Sbjct: 813 EEIPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHL 872

Query: 173 RSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-LTKLDLSDCG 227
           +SL  S C      P +       +   L G S   +    P   G  S L KL + +C 
Sbjct: 873 KSLSVSHCQSLSKLPDSIGGLASLVELWLEGTSVTEI----PDQVGTLSMLRKLHIGNC- 927

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           +    +P  I  + +L  L L+ +    LP SI  L +L  L L  CK+LQ LP    NL
Sbjct: 928 MDLRFLPESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPASIGNL 987

Query: 288 Q 288
           +
Sbjct: 988 K 988



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 158/359 (44%), Gaps = 74/359 (20%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           ++D+ L+G +  ++P+ ++ L        +GC +L +LP     ++ L  L+LS  SK++
Sbjct: 599 INDVVLNG-NFKQMPAEVKFLQ------WRGC-SLENLPSEFC-MQHLAVLDLSH-SKIR 648

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
           K  +     E L  L L           + +   LE L L  CK LV++  S+  LK L 
Sbjct: 649 KLWKQSWCTERLLLLNLQNCYHLTALPDLSVHSALEKLILENCKALVQIHKSVGDLKKLI 708

Query: 127 TLNLSGCC------------------------KLENVPDTLGKVESLEELDVSGTAIRRP 162
            LNL GC                         K++ +PD +  +++L EL +  TAI + 
Sbjct: 709 HLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSMKNLRELLLDETAIVKL 768

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML---------PSLT 213
             SIF +K LR L   GC        W L      +GK +    L L          S+ 
Sbjct: 769 PDSIFHLKELRKLSLKGC--------WLLRHVSVHIGKLTSLQELSLDSSGLEEIPDSIG 820

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            + +L  L+L+ C     AIP  I NL SL +L L  ++   LPASI  L +L+ L +  
Sbjct: 821 SLSNLEILNLARCK-SLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKSLSVSH 879

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSLVTLF-------------GALKLCRSKYTIINCID 319
           C   QSL ++P ++      G +SLV L+             G L + R K  I NC+D
Sbjct: 880 C---QSLSKLPDSI-----GGLASLVELWLEGTSVTEIPDQVGTLSMLR-KLHIGNCMD 929



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L GC NL   P  +S LK L  L+L+G  K ++ P+   S   L E+ L+ TAI 
Sbjct: 707 LIHLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSMKNLRELLLDETAIV 766

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +LK C  L+ +   I  L SL+ +     S L+ + +++G + +L
Sbjct: 767 KLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELSLDS-SGLEEIPDSIGSLSNL 825

Query: 803 EV 804
           E+
Sbjct: 826 EI 827



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 2/123 (1%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TA 740
            L +L L  CK L ++ +++  LK L  LNL G S   EFP   S    L  + L G   
Sbjct: 682 ALEKLILENCKALVQIHKSVGDLKKLIHLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPK 741

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           I+ LP  +  +  N+   L D   +  LP +I  L+ LR +   GC  L++V+  +GK+ 
Sbjct: 742 IKQLPDDMRSMK-NLRELLLDETAIVKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLT 800

Query: 801 SLE 803
           SL+
Sbjct: 801 SLQ 803



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 5/135 (3%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R +S+ I  L  L +L+L+    LE +P +I +L  L  LNL+        P+  S+ +
Sbjct: 789 LRHVSVHIGKLTSLQELSLDSS-GLEEIPDSIGSLSNLEILNLARCKSLIAIPDSISNLE 847

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L+++ L  ++I  LPASI  L      ++  C++L  LP +I GL SL  ++  G S  
Sbjct: 848 SLIDLRLGSSSIEELPASIGSLCHLKSLSVSHCQSLSKLPDSIGGLASLVELWLEGTS-- 905

Query: 790 KNVTETLGKVESLEV 804
             VTE   +V +L +
Sbjct: 906 --VTEIPDQVGTLSM 918



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 32/157 (20%)

Query: 657 FPDIVQVLSDGTDIR-------ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            PD +  L    D+R       EL  +I  L  L  L+++ C++L +LP +I  L  L  
Sbjct: 839 IPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKSLSVSHCQSLSKLPDSIGGLASLVE 898

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIH------------------------LEGTAIRGLP 745
           L L G S   E P+   +   L ++H                        L+ + I  LP
Sbjct: 899 LWLEGTS-VTEIPDQVGTLSMLRKLHIGNCMDLRFLPESIGKMLNLTTLILDYSMISELP 957

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            SIE+L       L  CK L+ LP++I  L+ L+ +Y
Sbjct: 958 ESIEMLESLSTLMLNKCKQLQRLPASIGNLKRLQHLY 994



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 2/127 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L+ L L G  ++E LP +I +L +L +L++S      + P+       L+E+ 
Sbjct: 842 SISNLESLIDLRL-GSSSIEELPASIGSLCHLKSLSVSHCQSLSKLPDSIGGLASLVELW 900

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           LEGT++  +P  +  LS     ++ +C +L+ LP +I  + +L  +     S +  + E+
Sbjct: 901 LEGTSVTEIPDQVGTLSMLRKLHIGNCMDLRFLPESIGKMLNLTTLILD-YSMISELPES 959

Query: 796 LGKVESL 802
           +  +ESL
Sbjct: 960 IEMLESL 966



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 33/168 (19%)

Query: 645  GNCSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
            GNC  L    E   +  ++  ++ D + I EL  +IE+L  L  L LN CK L+RLP +I
Sbjct: 925  GNCMDLRFLPESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPASI 984

Query: 702  SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
              LK L  L                        ++E T++  LP  + +LS  ++  ++ 
Sbjct: 985  GNLKRLQHL------------------------YMEETSVSELPDEMGMLSNLMIWKMRK 1020

Query: 762  --CKNLKS----LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
               + L+     LP +++ L  L  +   G +    V +   K+ SL+
Sbjct: 1021 PHTRQLQDTASVLPKSLSNLSLLEHLDACGWAFFGAVPDEFDKLSSLQ 1068


>gi|357500729|ref|XP_003620653.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495668|gb|AES76871.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1235

 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 175/379 (46%), Gaps = 61/379 (16%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            P LE L L  C+ LV L SSI  L+ L  LNL  C  L ++P+++  + SLE+L + G 
Sbjct: 638 FPNLESLNLERCEKLVELDSSIGLLRKLVYLNLDYCINLVSIPNSIFCLSSLEDLYMCG- 696

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
                 S +F   N R+L     +   +   W       ++  +       LPSL  +  
Sbjct: 697 -----CSKVF--NNSRNLIEKKHDINESFHKW-------IILPTPTRNTYCLPSLHSLYC 742

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L ++D+S C L +  +P  I+ LHSL+ LYL  N FVTLP S+  L  LE L+L+ CK L
Sbjct: 743 LRQVDISFCHLNQ--VPDAIEGLHSLERLYLAGNYFVTLP-SLRKLSKLEYLDLQHCKLL 799

Query: 278 QSLPQIP-PNLQ-------------FVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
           +SLPQ+P P                + R N   +L+ LF           I NC   ++ 
Sbjct: 800 ESLPQLPFPTTTEQDWWIRSQDFSGYRRTNHGPALIGLF-----------IFNCPKLVER 848

Query: 324 LRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTR-PSYLYN 382
            R + + IS +  +++     +    L IV PGS+IP W   Q+ G+SI++   P    N
Sbjct: 849 ERCSSITISWMAHFIQANQQPNKLSALQIVTPGSEIPSWINNQSVGASISIDESPVINDN 908

Query: 383 VNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVV---- 438
            N ++GF  C +  +    T   + H +P   L   M    + +    R K   ++    
Sbjct: 909 NNNIIGFVSCVLISMAPQDTT--MMHCFP---LSIYMKMGAKRN----RRKLPVIIVRDL 959

Query: 439 ----SDHLWLLFLPRHGHN 453
               S HLWL++ PR  ++
Sbjct: 960 ITTKSSHLWLVYFPRESYD 978



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 10/145 (6%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL-KKFPQIVASM 75
           + E+ SSI LL  L  L L  C NL S+P +I  L  L  L + GCSK+      ++   
Sbjct: 652 LVELDSSIGLLRKLVYLNLDYCINLVSIPNSIFCLSSLEDLYMCGCSKVFNNSRNLIEKK 711

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLY------LNECKNLVRLPSSINGLKSLKTLN 129
            D+++ +     +     +   LP L  LY      ++ C +L ++P +I GL SL+ L 
Sbjct: 712 HDINESFHKWIILPTPTRNTYCLPSLHSLYCLRQVDISFC-HLNQVPDAIEGLHSLERLY 770

Query: 130 LSGCCKLENVPDTLGKVESLEELDV 154
           L+G      +P +L K+  LE LD+
Sbjct: 771 LAG-NYFVTLP-SLRKLSKLEYLDL 793



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 34/132 (25%)

Query: 16  SITEVPSSIELLTGLELLTLKGC-------------------------------KNLSSL 44
           ++  +P+SI  L+ LE L + GC                               +N   L
Sbjct: 675 NLVSIPNSIFCLSSLEDLYMCGCSKVFNNSRNLIEKKHDINESFHKWIILPTPTRNTYCL 734

Query: 45  PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELL 104
           P ++ SL CLR +++S C  L + P  +  +  L +LYL G     +P S+  L  LE L
Sbjct: 735 P-SLHSLYCLRQVDISFC-HLNQVPDAIEGLHSLERLYLAGNYFVTLP-SLRKLSKLEYL 791

Query: 105 YLNECKNLVRLP 116
            L  CK L  LP
Sbjct: 792 DLQHCKLLESLP 803



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 6/90 (6%)

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           LS   +  +  F EFP + S   +  E  +E      L +SI LL   +  NL  C NL 
Sbjct: 624 LSDSKIEKIIDFGEFPNLESLNLERCEKLVE------LDSSIGLLRKLVYLNLDYCINLV 677

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           S+P++I  L SL  +Y  GCSK+ N +  L
Sbjct: 678 SIPNSIFCLSSLEDLYMCGCSKVFNNSRNL 707


>gi|10121908|gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 203/464 (43%), Gaps = 105/464 (22%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
            + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 937  IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 996

Query: 40   -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
              L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 997  TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 1056

Query: 93   ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                              + IE LP        +  L L  CK 
Sbjct: 1057 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 1116

Query: 112  LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
            L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 1117 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 1175

Query: 171  NLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
            +L  LY      +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 1176 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 1235

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 1236 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 1294

Query: 274  CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA--I 331
            C+ L+ LP +P  L+ +    C SL ++    +L  +  T +N  +  K++   GL    
Sbjct: 1295 CRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL--TILTDLNLTNCAKVVDIPGLEHLT 1352

Query: 332  SMLREYLE----------LQAVSDPGHKL--SIVFPGSQIPKWF 363
            ++ R Y+            + +S    K+  ++  PG+++P WF
Sbjct: 1353 ALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF 1396



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 47/328 (14%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 880  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 939

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
            M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 940  MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 999

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
              LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 1000 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 1055

Query: 169  MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
               L SLY FS  +     + P+S      L    L  SS P+  +   +  +  + +L+
Sbjct: 1056 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSL--LQLQLSSTPIEALPEEIGALHFIRELE 1110

Query: 223  LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 1111 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 1169

Query: 283  IPPNLQ-----FVRANGCSSLVTLFGAL 305
               +L+     +++    S L   FG L
Sbjct: 1170 SFGDLKSLHRLYMKETLVSELPESFGNL 1197



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 2/124 (1%)

Query: 680  LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
            L  L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GT
Sbjct: 892  LRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGT 951

Query: 740  AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            AI+ LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +
Sbjct: 952  AIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDL 1009

Query: 800  ESLE 803
            ++L+
Sbjct: 1010 KNLQ 1013



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 1093 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 1152

Query: 754  NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
             +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 1153 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 1211

Query: 805  RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
            R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 1212 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 1249



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 22/133 (16%)

Query: 662  QVLSDGTDIRELSLAIELLFGLVQLTLNGCK----------------------NLERLPR 699
            ++L DGT I+ L  +I  L  L  L+L GCK                       L+ LP 
Sbjct: 945  ELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPS 1004

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  LK L  L+L   +   + P+  +    L ++ + G+A+  LP     L      + 
Sbjct: 1005 SIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSA 1064

Query: 760  KDCKNLKSLPSTI 772
             DCK LK +PS+I
Sbjct: 1065 GDCKFLKQVPSSI 1077



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 995  DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 1053

Query: 726  SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
            SS   L +                          L  T I  LP  I  L       L++
Sbjct: 1054 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 1113

Query: 762  CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
            CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 1114 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 1160


>gi|356577113|ref|XP_003556672.1| PREDICTED: putative disease resistance protein At4g11170-like
            [Glycine max]
          Length = 1344

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 229/552 (41%), Gaps = 109/552 (19%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP--VTISSLKCLRTLELSGCSKLKK 67
            L L GTSI E+P+S+     L  L L  CK L + P    +  L  +     S  S    
Sbjct: 823  LNLRGTSIKELPTSLWRNNKLFTLVLHSCKKLVNFPDRPKLEDLPLIFNGVSSSESPNTD 882

Query: 68   FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS---------- 117
             P  ++S+ DLS   L G+SI  +P SI+ LP L+ L L ECK L  LPS          
Sbjct: 883  EPWTLSSLADLS---LKGSSIENLPVSIKDLPSLKKLTLTECKKLRSLPSLPPSLEDLSL 939

Query: 118  ----------SINGLKSLKTLNLSGCCKL---ENVPDTLGKVESLEELDVSGTAIRRPTS 164
                      SI  L  LK L L+   KL   +++P +  K   L E  V         S
Sbjct: 940  DESDIECLSLSIKDLSHLKILTLTNYKKLMSPQDLPSS-SKASLLNESKVD--------S 990

Query: 165  SIFLMKNLRSLY---------FSGCNEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTG 214
             +  MK L  L          F    E P         PF   L  S   +  +  S+  
Sbjct: 991  HLVSMKGLSHLQKFPLVKWKRFHSLPELP---------PFLEELSLSESNIECIPKSIKN 1041

Query: 215  VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
            +  L KL +  C  G   +P   +    LK+L++   +  +LP SI  L++L ++ L +C
Sbjct: 1042 LSHLRKLAIKKCT-GLRYLP---ELPPYLKDLFVRGCDIESLPISIKDLVHLRKITLIEC 1097

Query: 275  KRLQSLPQIPPNLQFVRANGCSSL-VTLFGALKLCRSKYT-IINCIDSLKLLRKNGLAIS 332
            K+LQ LP++PP LQ   A  C SL +       L   +Y    NCI   +  R N +A +
Sbjct: 1098 KKLQVLPELPPCLQSFCAADCRSLEIVRSSKTVLIEDRYAYYYNCISLDQNSRNNIIADA 1157

Query: 333  MLR-EYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
                 Y  LQ  +  G  +SI  PG++IP WF YQ+  SS+ +  P   +  +K +GFA+
Sbjct: 1158 PFEAAYTSLQQGTPLGPLISICLPGTEIPDWFSYQSTNSSLDMEIPQQWFKDSKFLGFAL 1217

Query: 392  CCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKF---------GHVV---- 438
            C V        G +L +SY  ++ +          Y + +  F         GH      
Sbjct: 1218 CLVI-------GGFLQNSYEGYDPDVKC-------YHFVKSAFNSDPSVPFLGHCTTVMQ 1263

Query: 439  ------SDHLWLLFLPRHGHN---------WQFESNLIRL----SFRSISDPTWKVKRCG 479
                  SDH+++ + P    +           +++N +RL     F+        VK+CG
Sbjct: 1264 VPQGFNSDHMFICYYPTFNASILQDFKDLGMYYDANSLRLRVIFKFKGPYQRLDIVKKCG 1323

Query: 480  FHPIYMHEVEEF 491
              P+ +   E F
Sbjct: 1324 VRPLLIANTERF 1335



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 131/279 (46%), Gaps = 41/279 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+  VP SI+ +  L L  L+ CKNL SLP+ I  L  L    L  CS L +F     +
Sbjct: 693 TSLLHVPLSIQYVKKLLLFNLESCKNLKSLPINI-HLSSLEMFILRRCSSLDEFS---VT 748

Query: 75  MEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            ++++ L L  T+I + P  + E L  L  L L  C  L  L S I+ LKSL+ L+L  C
Sbjct: 749 SQNMTNLDLRETAIKDFPEYLWEHLNKLVYLNLESCSMLKSLTSKIH-LKSLQKLSLRDC 807

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC----NEPPASASW 189
             LE    T    E++  L++ GT+I+   +S++    L +L    C    N P      
Sbjct: 808 SSLEEFSVT---SENMGCLNLRGTSIKELPTSLWRNNKLFTLVLHSCKKLVNFPDRPKLE 864

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            L L FN                 GV S            E+    +   L SL +L L 
Sbjct: 865 DLPLIFN-----------------GVSS-----------SESPNTDEPWTLSSLADLSLK 896

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            ++   LP SI  L +L++L L +CK+L+SLP +PP+L+
Sbjct: 897 GSSIENLPVSIKDLPSLKKLTLTECKKLRSLPSLPPSLE 935



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 6/146 (4%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +S  T +  + L+I+ +  L+   L  CKNL+ LP  I    +LS+L +  L +     E
Sbjct: 689 VSHCTSLLHVPLSIQYVKKLLLFNLESCKNLKSLPINI----HLSSLEMFILRRCSSLDE 744

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            + +   +  + L  TAI+  P  + E L+  +  NL+ C  LKSL S I+ L+SL+ + 
Sbjct: 745 FSVTSQNMTNLDLRETAIKDFPEYLWEHLNKLVYLNLESCSMLKSLTSKIH-LKSLQKLS 803

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSS 808
              CS L+  + T   +  L +R +S
Sbjct: 804 LRDCSSLEEFSVTSENMGCLNLRGTS 829



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 65/261 (24%)

Query: 608 ISQQGQFVKMISVDSGCM-SCYKKWGRQTVRRQSPQEPGNCSRLWEEADEF--------P 658
           I Q+   V        CM    ++ G + V R+S ++PG  SRLW+  + +         
Sbjct: 500 ILQEKSLVTFSDDGKVCMHDLIQEMGWEIVHRESIKDPGRRSRLWDPKEVYDVLKNNRGT 559

Query: 659 DIVQ-VLSDGTDIRELSLAIELLFGLVQLTL----------------NGCKNL------- 694
           D V+ ++ D + I +L L+ E    ++ +                  +G K+L       
Sbjct: 560 DAVEGIILDVSQISDLPLSYETFSRMINIRFLKFYMGRGRTCNLLLPSGLKSLPNKLMYL 619

Query: 695 -----------------------------ERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
                                        E+L   I +   L  +NL    K    P+++
Sbjct: 620 QWDGYPSKSLPSTFCTDNLVVLSMMESHVEKLWDGIKSFASLKEINLRASKKLTNLPDLS 679

Query: 726 SSRD-QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
            + + + +++    T++  +P SI+ +   +L NL+ CKNLKSLP  I+ L SL M    
Sbjct: 680 LAPNLETIDVS-HCTSLLHVPLSIQYVKKLLLFNLESCKNLKSLPINIH-LSSLEMFILR 737

Query: 785 GCSKLKNVTETLGKVESLEVR 805
            CS L   + T   + +L++R
Sbjct: 738 RCSSLDEFSVTSQNMTNLDLR 758


>gi|359493390|ref|XP_003634584.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1067

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 212/500 (42%), Gaps = 110/500 (22%)

Query: 59   LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            +S CSKLK FP I                      +   L  LE L  + C+NL  LP S
Sbjct: 556  ISRCSKLKGFPDI----------------------NFGSLKALESLDFSGCRNLESLPVS 593

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVE------SLEELDVSGTAI------------- 159
            I  + SLKTL ++ C KLE + +    V+      S     +S +AI             
Sbjct: 594  IYNVSSLKTLGITNCPKLEEMLEMKLGVDPCPWPFSPLTCHISNSAIIWDDHWHDCFSSL 653

Query: 160  -----RRPTSSIFLMKNLRSLYFSGCNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLT 213
                 + P SS+  + ++R  Y    + P  S+  HL  L    LG     V  +L  + 
Sbjct: 654  EALDSQCPLSSLVEL-SVRKFYDMEEDIPIGSS--HLTSLEILSLGNVPTVVEGILYDIF 710

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLH-------------------------SLKELYL 248
             + SL KL L+ C   E  IP DI NL                          SL+ELYL
Sbjct: 711  HLSSLVKLSLTKCKPTEEGIPRDIQNLSPLQQLSLHDCNLMKGTILDHICHLTSLEELYL 770

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
              N+F ++PA IS L NL+ L+L  CK+LQ +P++P +L+F+ A+ C   ++   +  L 
Sbjct: 771  GWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPELPSSLRFLDAH-CPDRIS---SSPLL 826

Query: 309  RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNE 368
               ++++NC  S    RK      ++  Y         G+ + IV P S I +W  Y+N 
Sbjct: 827  LPIHSMVNCFKSKIEGRK------VINRYSSFY-----GNGIGIVIPSSGILEWITYRNM 875

Query: 369  GSSITVTRPSYLYNVNKVVGFAICCVFQVP--------KHSTG------TYLFHSYPAHE 414
            G  +T+  P   Y  + + GFA+CCV+  P        ++ +G      + L     +  
Sbjct: 876  GRQVTIELPPNWYKNDDLWGFALCCVYVAPACKSEDESQYESGLISEDDSDLKDEEASFY 935

Query: 415  LECSMDGSGE----GHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISD 470
             E +++G+ +    GH+          VSD  W++  P+      + +N  + +    S 
Sbjct: 936  CELTIEGNNQSEDVGHFFLHSRCIKDDVSDMQWVICYPKLAIEKSYHTN--QWTHFKASF 993

Query: 471  PTWKVKRCGFHPIYMHEVEE 490
               +V+ CG   +Y  + E+
Sbjct: 994  GGAQVEECGIRLVYRKDYEQ 1013


>gi|224121242|ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1360

 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 196/422 (46%), Gaps = 68/422 (16%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
            + ++  L +L L+ +++ E+P SI  L+ LE L+L  C++L++                 
Sbjct: 800  LGNLISLKELSLNHSAVEELPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQSLMEVSIT 859

Query: 44   ------LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                  LP  I SL  L+TL   GC  L K P  +  +  +S+L LDGTSI+E+P  I  
Sbjct: 860  SSAIKELPAAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTSISELPEQIRG 919

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLE--ELDVS 155
            L  +E LYL +C +L  LP +I  + +L T+NL GC  +  +P++ G++E+L    LD  
Sbjct: 920  LKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGC-NITELPESFGRLENLVMLNLDEC 978

Query: 156  GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM------- 208
                + P S    + NL+SL      +   +      LP N    SS  +  M       
Sbjct: 979  KRLHKLPVS----IGNLKSLCHLLMEKTAVTV-----LPENFGNLSSLMILKMQKDPLEY 1029

Query: 209  ---------LP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPA 258
                     LP S + +  L +L+     +    +P D + L SL  L L  NNF +LP+
Sbjct: 1030 LRTQEQLVVLPNSFSKLSLLEELNARAWRIS-GKLPDDFEKLSSLDILDLGHNNFSSLPS 1088

Query: 259  SISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCI 318
            S+ GL  L +L L  C+ L+SLP +PP+L+ +  + C  L T+     L R   T++N  
Sbjct: 1089 SLCGLSLLRKLLLPHCEELKSLPPLPPSLEELDVSNCFGLETISDVSGLER--LTLLNIT 1146

Query: 319  DSLKLLRKNGLAISMLREYLELQAVS----DPGHKLSIV---------FPGSQIPKWFMY 365
            +  K++   G+      + L + +          +LS V          PGS+ P WF  
Sbjct: 1147 NCEKVVDIPGIGCLKFLKRLYMSSCKACSLTVKRRLSKVCLRNIRNLSMPGSKFPDWFSQ 1206

Query: 366  QN 367
            +N
Sbjct: 1207 EN 1208



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 157/324 (48%), Gaps = 48/324 (14%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  K L  L   G   +T++  S+  +  L  L L  C NL   P  +S L+ L+ L L
Sbjct: 681 LSGCKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLDKCINLVEFPRDVSGLRLLQNLIL 740

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S C KL++ PQ + SM  L +L +D T+I+ +P S+  L  LE L LN+CK + RLP  +
Sbjct: 741 SSCLKLEELPQDIGSMNSLKELVVDETAISMLPQSLYRLTKLEKLSLNDCKFIKRLPERL 800

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV----SGTAIRRPTSSIFLMKNLRSL 175
             L SLK L+L+    +E +PD++G + +LE+L +    S T I  P S    ++NL+SL
Sbjct: 801 GNLISLKELSLNHSA-VEELPDSIGSLSNLEKLSLMRCQSLTTI--PES----IRNLQSL 853

Query: 176 Y-----FSGCNEPPASASWHLHLPF-NLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGL 228
                  S   E PA+      LP+   L    C     LP S+ G+ S+++L+L    +
Sbjct: 854 MEVSITSSAIKELPAAIG---SLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTSI 910

Query: 229 GEAAIPSDIDNLHSLKELYLNR------------------------NNFVTLPASISGLL 264
            E  +P  I  L  +++LYL +                         N   LP S   L 
Sbjct: 911 SE--LPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGCNITELPESFGRLE 968

Query: 265 NLEELELEDCKRLQSLPQIPPNLQ 288
           NL  L L++CKRL  LP    NL+
Sbjct: 969 NLVMLNLDECKRLHKLPVSIGNLK 992



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L+ C NL   PR +S L+ L  L LS   K  E P+   S + L E+ ++ TAI 
Sbjct: 711 LLQLNLDKCINLVEFPRDVSGLRLLQNLILSSCLKLEELPQDIGSMNSLKELVVDETAIS 770

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP S+  L+     +L DCK +K LP  +  L SL+ +  +  S ++ + +++G + +L
Sbjct: 771 MLPQSLYRLTKLEKLSLNDCKFIKRLPERLGNLISLKELSLNH-SAVEELPDSIGSLSNL 829

Query: 803 E 803
           E
Sbjct: 830 E 830



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 32/194 (16%)

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC- 180
           ++L  +NL  C  LE  PD  G  + LE+LD  G   + +   S+  ++ L  L    C 
Sbjct: 662 ENLMVMNLRRCYNLEASPDLSG-CKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLDKCI 720

Query: 181 --NEPPASASWHLHLPFNLLGKSSC------------------------PVALMLPSLTG 214
              E P   S  L L  NL+  SSC                         ++++  SL  
Sbjct: 721 NLVEFPRDVS-GLRLLQNLI-LSSCLKLEELPQDIGSMNSLKELVVDETAISMLPQSLYR 778

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           +  L KL L+DC   +  +P  + NL SLKEL LN +    LP SI  L NLE+L L  C
Sbjct: 779 LTKLEKLSLNDCKFIK-RLPERLGNLISLKELSLNHSAVEELPDSIGSLSNLEKLSLMRC 837

Query: 275 KRLQSLPQIPPNLQ 288
           + L ++P+   NLQ
Sbjct: 838 QSLTTIPESIRNLQ 851



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 23/142 (16%)

Query: 660 IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS--- 716
           +++V    + I+EL  AI  L  L  L   GC  L +LP +I  L  +S L L G S   
Sbjct: 853 LMEVSITSSAIKELPAAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTSISE 912

Query: 717 --------------------KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
                                 RE PE   +   L  I+L G  I  LP S   L   ++
Sbjct: 913 LPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGCNITELPESFGRLENLVM 972

Query: 757 SNLKDCKNLKSLPSTINGLRSL 778
            NL +CK L  LP +I  L+SL
Sbjct: 973 LNLDECKRLHKLPVSIGNLKSL 994



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 146/355 (41%), Gaps = 80/355 (22%)

Query: 500 RFTSCNLNEVHHDFVGSNMEVAQASGSGSSQ-WKWL--KPVEVAVVMIMMRNHNLR---D 553
           ++ +C L ++  D+    + V   S SG  + W W   K  E  +VM + R +NL    D
Sbjct: 621 QWKNCPLKKLPSDYAPHELAVLDLSESGIQRVWGWTRNKVAENLMVMNLRRCYNLEASPD 680

Query: 554 LDNSNEGQSLLNRGTVEDLWYNSRAYDVFDDMPTKERASHLMCCINSMVSQAKAISQQGQ 613
           L    + + L  +G ++     ++ ++   ++ T  +  +L  CIN +V   + +S    
Sbjct: 681 LSGCKKLEKLDFKGCIQ----LTKIHESLGNVRTLLQL-NLDKCIN-LVEFPRDVSGLRL 734

Query: 614 FVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL 673
              +I       SC K         + PQ+ G+ + L E          ++ D T I  L
Sbjct: 735 LQNLI-----LSSCLK-------LEELPQDIGSMNSLKE----------LVVDETAISML 772

Query: 674 SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL------------------NLSGL 715
             ++  L  L +L+LN CK ++RLP  +  L  L  L                  NL  L
Sbjct: 773 PQSLYRLTKLEKLSLNDCKFIKRLPERLGNLISLKELSLNHSAVEELPDSIGSLSNLEKL 832

Query: 716 SKFR-----EFPEITSSRDQLLEIHLEGTAIRGLPASI-------ELLSG--NILSNLKD 761
           S  R       PE   +   L+E+ +  +AI+ LPA+I        L +G  + LS L D
Sbjct: 833 SLMRCQSLTTIPESIRNLQSLMEVSITSSAIKELPAAIGSLPYLKTLFAGGCHFLSKLPD 892

Query: 762 C--------------KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                           ++  LP  I GL+ +  +Y   C+ L+ + E +G + +L
Sbjct: 893 SIGGLASISELELDGTSISELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNL 947



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 22/182 (12%)

Query: 638 RQSPQEPGNCSRLWE------EADEFPDIVQVLSDGTDIRELSL-----------AIELL 680
           ++ P+  GN   L E        +E PD +  LS+   + +LSL           +I  L
Sbjct: 794 KRLPERLGNLISLKELSLNHSAVEELPDSIGSLSN---LEKLSLMRCQSLTTIPESIRNL 850

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
             L+++++     ++ LP  I +L YL TL   G     + P+       + E+ L+GT+
Sbjct: 851 QSLMEVSITSSA-IKELPAAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTS 909

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           I  LP  I  L       L+ C +L+ LP  I  + +L  +   GC+ +  + E+ G++E
Sbjct: 910 ISELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGCN-ITELPESFGRLE 968

Query: 801 SL 802
           +L
Sbjct: 969 NL 970


>gi|15241520|ref|NP_199264.1| target of AVRB operation1 protein [Arabidopsis thaliana]
 gi|9758704|dbj|BAB09158.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007735|gb|AED95118.1| target of AVRB operation1 protein [Arabidopsis thaliana]
          Length = 1187

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 186/375 (49%), Gaps = 39/375 (10%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ E+PSSI   T L  L L  C +L  LP +I +L  L+ L L+ CS L K P    ++
Sbjct: 692  SLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNV 751

Query: 76   EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
              L +L L G +S+ E+PSSI  +  L+ +Y + C +LV+LPSSI    +LK L+L  C 
Sbjct: 752  TSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCS 811

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
             L   P ++  +  LE+L++SG        SI  + NL+SLY S C       S  + LP
Sbjct: 812  SLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDC-------SSLMELP 864

Query: 195  FNL--------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
            F +        L    C   L LP S+  + +L  L L+ C      +PS ++N  +L+ 
Sbjct: 865  FTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCS-SLKELPSLVENAINLQS 923

Query: 246  LYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSL-----PQIPPNLQFVRANGCSSLV 299
            L L + ++ V LP+SI  + NL  L++ +C  L  L     P +P +L  + A  C SLV
Sbjct: 924  LSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLELNLVSHPVVPDSL-ILDAGDCESLV 982

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
                     ++   ++N  +  KL   N  A  ++   ++  A  +       + PG ++
Sbjct: 983  QRLDC--FFQNPKIVLNFANCFKL---NQEARDLI---IQTSACRNA------ILPGEKV 1028

Query: 360  PKWFMYQNEGSSITV 374
            P +F Y+  G S+TV
Sbjct: 1029 PAYFTYRATGDSLTV 1043



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 117/214 (54%), Gaps = 13/214 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++ +L  +Y DG +S+ ++PSSI   T L+ L L  C +L   P ++ +L  L  L L
Sbjct: 772 IGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNL 831

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC  L K P I  ++ +L  LYL D +S+ E+P +IE    L+ LYL+ C NL+ LPSS
Sbjct: 832 SGCLSLVKLPSI-GNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSS 890

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I  + +L++L L+GC  L+ +P  +    +L+ L +   +++    SSI+ + NL  L  
Sbjct: 891 IWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDV 950

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS 211
           S C+           L  NL+     P +L+L +
Sbjct: 951 SNCSS---------LLELNLVSHPVVPDSLILDA 975



 Score = 45.8 bits (107), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 6/151 (3%)

Query: 647 CSRLWEEADEFPDIV---QVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E      +IV   +V +DG + + +L  +I     L +L L  C +L   P ++ 
Sbjct: 762 CSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSML 821

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKD 761
            L  L  LNLSG     + P I +  + L  ++L + +++  LP +IE  +      L  
Sbjct: 822 NLTRLEDLNLSGCLSLVKLPSIGNVIN-LQSLYLSDCSSLMELPFTIENATNLDTLYLDG 880

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           C NL  LPS+I  + +L+ +Y +GCS LK +
Sbjct: 881 CSNLLELPSSIWNITNLQSLYLNGCSSLKEL 911



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 12/146 (8%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D + + +L  +I  L  L +L LN C +L +LP +   +  L  LNLSG S   E P 
Sbjct: 711 LIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPS 770

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRS 777
              +   L +++ +G +++  LP+SI    GN  +NLK+     C +L   PS++  L  
Sbjct: 771 SIGNIVNLKKVYADGCSSLVQLPSSI----GNN-TNLKELHLLNCSSLMECPSSMLNLTR 825

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLE 803
           L  +  SGC  L  +  ++G V +L+
Sbjct: 826 LEDLNLSGCLSLVKLP-SIGNVINLQ 850



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD + + EL   IE    L  L L+GC NL  LP +I  +  L +L L+G S  +E P 
Sbjct: 854 LSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPS 913

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
           +  +   L  + L + +++  LP+SI  +S     ++ +C +L  L
Sbjct: 914 LVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLEL 959



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLS 752
           LE+L      ++ L  ++LS     +E P+ +++ + L E+ L    ++  LP+SI   +
Sbjct: 646 LEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATN-LQELRLINCLSLVELPSSIGNAT 704

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             +  +L DC +L  LPS+I  L +L+ ++ + CS L  +  + G V SL+
Sbjct: 705 NLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLK 755



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-I 741
           L  L L+GC +L +LP +I  +  L +L LS  S   E P    +   L  ++L+G + +
Sbjct: 826 LEDLNLSGCLSLVKLP-SIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNL 884

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP+SI  ++      L  C +LK LPS +    +L+ +    CS L  +  ++ ++ +
Sbjct: 885 LELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISN 944

Query: 802 L 802
           L
Sbjct: 945 L 945


>gi|297850938|ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339192|gb|EFH69609.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1541

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 168/386 (43%), Gaps = 90/386 (23%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
            + +M  L +L LDGT+I  +P SI  L  LE+L+L GC+                     
Sbjct: 921  IGAMTSLKELLLDGTAIKYLPESINRLQNLEILSLSGCRYIPELPLCIGTLKSLEKLYLN 980

Query: 40   --NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
               L +LP +I  LK L+ L L  C+ L K P  +  +  L KL++ G+++ E+P     
Sbjct: 981  DTALKNLPSSIGDLKKLQDLHLVRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPSS 1040

Query: 98   LPGLELLYLNECKNLVRLPSSING------------------------------------ 121
            LP L       CK L ++PSSI G                                    
Sbjct: 1041 LPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELMNCE 1100

Query: 122  -----------LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLM 169
                       + +L +LNL G   +E +P+  GK+E+L EL +S  T ++R   S   +
Sbjct: 1101 FLKFLPKSIGDMDTLCSLNLEGS-NIEELPEEFGKLENLVELRMSNCTMLKRLPESFGDL 1159

Query: 170  KNLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SL 212
            K+L  LY      +E P S            L  P       N  G S  P  + +P S 
Sbjct: 1160 KSLHHLYMKETLVSELPESFGNLSKLMVLEMLKNPLFRISESNAPGTSEEPRFVEVPNSF 1219

Query: 213  TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
            + + SL +LD     +    IP D++ L SL +L L  N F +LP+S+ GL NL+EL L 
Sbjct: 1220 SNLTSLEELDARSWRIS-GKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLR 1278

Query: 273  DCKRLQSLPQIPPNLQFVRANGCSSL 298
            DC+ L+ LP +P  L+ +    C SL
Sbjct: 1279 DCRELKRLPPLPCKLEHLNMANCFSL 1304



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 149/327 (45%), Gaps = 44/327 (13%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            T + +VP S+  L  L  L    C  LS     +S LK L  L LSGCS L   P+ + +
Sbjct: 864  TLLVKVPKSVGNLRKLLHLDFSRCSKLSEFLADVSGLKRLEKLFLSGCSDLSVLPENIGA 923

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-----------------------N 111
            M  L +L LDGT+I  +P SI  L  LE+L L+ C+                        
Sbjct: 924  MTSLKELLLDGTAIKYLPESINRLQNLEILSLSGCRYIPELPLCIGTLKSLEKLYLNDTA 983

Query: 112  LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIF 167
            L  LPSSI  LK L+ L+L  C  L  +PD++ ++ SL++L ++G+A+     +P+S   
Sbjct: 984  LKNLPSSIGDLKKLQDLHLVRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPSS--- 1040

Query: 168  LMKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-LTKLDL 223
             + +L      GC    + P+S      L    L  +       LP   G    + KL+L
Sbjct: 1041 -LPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEA---LPKEIGALHFIRKLEL 1096

Query: 224  SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
             +C   +  +P  I ++ +L  L L  +N   LP     L NL EL + +C  L+ LP+ 
Sbjct: 1097 MNCEFLK-FLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRLPES 1155

Query: 284  PPNLQ-----FVRANGCSSLVTLFGAL 305
              +L+     +++    S L   FG L
Sbjct: 1156 FGDLKSLHHLYMKETLVSELPESFGNL 1182



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L  + C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 879 LLHLDFSRCSKLSEFLADVSGLKRLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 938

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L  C+ +  LP  I  L+SL  +Y +  + LKN+  ++G ++ L
Sbjct: 939 YLPESINRLQNLEILSLSGCRYIPELPLCIGTLKSLEKLYLNDTA-LKNLPSSIGDLKKL 997

Query: 803 E 803
           +
Sbjct: 998 Q 998



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 92/212 (43%), Gaps = 41/212 (19%)

Query: 101 LELLYLNECK---NLVRLPSSINGLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSG 156
           L LL +N  +   NL  LPS       LK +   GC  LEN+P D L +   L  LD+S 
Sbjct: 764 LRLLQINNVELEGNLKLLPSE------LKWIQWKGC-PLENLPPDFLAR--QLSVLDLSE 814

Query: 157 TAIRRPTS--SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP---- 210
           + IRR  +  S  + +NL+ L   GC+   A      H    +L    C + + +P    
Sbjct: 815 SGIRRVQTLRSNRVDENLKVLILRGCHSLEAIPDLSNHEALEMLVFEQCTLLVKVPKSVG 874

Query: 211 ---------------------SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                                 ++G+  L KL LS C    + +P +I  + SLKEL L+
Sbjct: 875 NLRKLLHLDFSRCSKLSEFLADVSGLKRLEKLFLSGCS-DLSVLPENIGAMTSLKELLLD 933

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
                 LP SI+ L NLE L L  C+ +  LP
Sbjct: 934 GTAIKYLPESINRLQNLEILSLSGCRYIPELP 965



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 37/243 (15%)

Query: 648  SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
            S++ +  +E   + ++   G+ + EL L    L  L   +  GCK L             
Sbjct: 1009 SKIPDSINELISLKKLFITGSAVEELPLKPSSLPSLTDFSAGGCKFLKQVPSSIGGLNSL 1068

Query: 695  ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                      E LP+ I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 1069 LQLQLNTTLIEALPKEIGALHFIRKLELMNCEFLKFLPKSIGDMDTLCSLNLEGSNIEEL 1128

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY--PSGCSKLKNVTETLGKVESL 802
            P     L   +   + +C  LK LP +   L+SL  +Y   +  S+L      L K+  L
Sbjct: 1129 PEEFGKLENLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETLVSELPESFGNLSKLMVL 1188

Query: 803  EV------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK---KNVDKCMK 853
            E+      R+S  N P    +   VE     + + L   E L D+ SW+   K  D   K
Sbjct: 1189 EMLKNPLFRISESNAPGTSEEPRFVE--VPNSFSNLTSLEEL-DARSWRISGKIPDDLEK 1245

Query: 854  LST 856
            LS+
Sbjct: 1246 LSS 1248



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 24/126 (19%)

Query: 662  QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREF 721
            ++L DGT I+ L  +I  L  L  L+L+GC+ +  LP  I  LK L  L           
Sbjct: 929  ELLLDGTAIKYLPESINRLQNLEILSLSGCRYIPELPLCIGTLKSLEKL----------- 977

Query: 722  PEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
                         +L  TA++ LP+SI  L      +L  C +L  +P +IN L SL+ +
Sbjct: 978  -------------YLNDTALKNLPSSIGDLKKLQDLHLVRCTSLSKIPDSINELISLKKL 1024

Query: 782  YPSGCS 787
            + +G +
Sbjct: 1025 FITGSA 1030



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 48/227 (21%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN------------------LS 42
               +K L  LY+  T ++E+P S   L+  +L+ L+  KN                    
Sbjct: 1156 FGDLKSLHHLYMKETLVSELPESFGNLS--KLMVLEMLKNPLFRISESNAPGTSEEPRFV 1213

Query: 43   SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
             +P + S+L  L  L+        K P  +  +  L KL L       +PSS+  L  L+
Sbjct: 1214 EVPNSFSNLTSLEELDARSWRISGKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQ 1273

Query: 103  LLYLNECKNLVRLP--------------------SSINGLKSLKTLNLSGCCKLENVPDT 142
             L L +C+ L RLP                    S ++ L  L+ LNL+ C K+ ++P  
Sbjct: 1274 ELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTILEDLNLTNCGKVVDIP-G 1332

Query: 143  LGKVESLEELDVSG------TAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            L  + +L+ L ++G       A+++  S   L K LR+L   G   P
Sbjct: 1333 LEHLMALKRLYMTGCNSNYSLAVKKRLSKASL-KMLRNLSLPGNRVP 1378


>gi|399920230|gb|AFP55577.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1035

 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 214/534 (40%), Gaps = 140/534 (26%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
               + +L  L L+G TS+ ++  SI LL  L++   + CK++ SLP  ++ ++ L T ++
Sbjct: 627  FTGIPNLEKLVLEGCTSLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDI 685

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKLK  P+ V  M+ LSKLYL G ++ ++PSSIE L                     
Sbjct: 686  SGCSKLKIIPEFVGQMKRLSKLYLGGPAVEKLPSSIEHLS-------------------- 725

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                                       ESL ELD+SG  IR    S FL +NL       
Sbjct: 726  ---------------------------ESLVELDLSGIVIREQPYSRFLKQNL------- 751

Query: 180  CNEPPASASWHLHLPFNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                       +   F L   KS  P+  +L SL    SL +L L+DC L E  IP+DI 
Sbjct: 752  -----------IASSFGLFPRKSPHPLIPLLASLKHFSSLKELKLNDCNLCEGEIPNDIG 800

Query: 239  NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            +L SL+ L L  NNF    A  S                        +  FVR N    L
Sbjct: 801  SLSSLRWLELGGNNFALTIARTSR-----------------------SATFVRNNN-QIL 836

Query: 299  VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
              L   L+    ++         ++L +  + + M   +   +    P   L  V PGS+
Sbjct: 837  AQLRQLLEYVLKRWI------EFEVLSRCDMMVRMQETH---RRTLQP---LEFVIPGSE 884

Query: 359  IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECS 418
            IP+WF  QN  S++    P    +          C  Q         ++++Y     +  
Sbjct: 885  IPEWFNNQNNPSAVPEEDPRLDPD---------SCEIQC--------IWNNY-----DID 922

Query: 419  MDGSGEGHYIYFRGKFGHVVSDHLWLLFL--PRHGHNWQFESNLIRLSFRSI-SDPTWKV 475
            +D  G             +VSDHL LL L  P        E N +    R++ S+ + KV
Sbjct: 923  IDFGGIS--------VKQIVSDHLCLLVLLSPFQKPENYLEVNFVFTVRRAVGSNISMKV 974

Query: 476  KRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSS 529
            K+CG   +Y H+ EE      QS         EV   ++ +  E A  SGSG S
Sbjct: 975  KKCGVRALYEHDTEELISKMNQSKSSNISLYEEV--PWLKAKQEAA-TSGSGGS 1025



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T + ++  +I LL  L       CK+++ LP  ++ +++L T ++SG S
Sbjct: 631 PNLEKLVLEGCTSLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEVN-MEFLETFDISGCS 689

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           K +  PE      +L +++L G A+  LP+SIE LS +++
Sbjct: 690 KLKIIPEFVGQMKRLSKLYLGGPAVEKLPSSIEHLSESLV 729



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N+  L   I  L  L +++LS        P+ T   + L ++ LEG T++  +  SI LL
Sbjct: 596 NITHLWNGIKYLGKLKSIDLSYSINLTRTPDFTGIPN-LEKLVLEGCTSLVKIHPSIALL 654

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               + N ++CK++KSLPS +N +  L     SGCSKLK + E +G+++ L
Sbjct: 655 KRLKIWNFRNCKSIKSLPSEVN-MEFLETFDISGCSKLKIIPEFVGQMKRL 704


>gi|238478649|ref|NP_001154372.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192669|gb|AEE30790.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 203/464 (43%), Gaps = 105/464 (22%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
            + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 761  IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 820

Query: 40   -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
              L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 821  TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 880

Query: 93   ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                              + IE LP        +  L L  CK 
Sbjct: 881  PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 940

Query: 112  LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
            L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 941  LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 999

Query: 171  NLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
            +L  LY      +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 1000 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 1059

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 1060 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 1118

Query: 274  CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA--I 331
            C+ L+ LP +P  L+ +    C SL ++    +L  +  T +N  +  K++   GL    
Sbjct: 1119 CRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL--TILTDLNLTNCAKVVDIPGLEHLT 1176

Query: 332  SMLREYLE----------LQAVSDPGHKL--SIVFPGSQIPKWF 363
            ++ R Y+            + +S    K+  ++  PG+++P WF
Sbjct: 1177 ALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF 1220



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 156/328 (47%), Gaps = 47/328 (14%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 704  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 763

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
            M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 764  MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 823

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
              LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 824  KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 879

Query: 169  MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
               L SLY FS  +     + P+S           L  SS P+  +   +  +  + +L+
Sbjct: 880  ---LPSLYDFSAGDCKFLKQVPSSIGRLNS--LLQLQLSSTPIEALPEEIGALHFIRELE 934

Query: 223  LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 935  LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 993

Query: 283  IPPNLQ-----FVRANGCSSLVTLFGAL 305
               +L+     +++    S L   FG L
Sbjct: 994  SFGDLKSLHRLYMKETLVSELPESFGNL 1021



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 2/124 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GT
Sbjct: 716 LRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGT 775

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           AI+ LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +
Sbjct: 776 AIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDL 833

Query: 800 ESLE 803
           ++L+
Sbjct: 834 KNLQ 837



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 118/281 (41%), Gaps = 58/281 (20%)

Query: 101 LELLYLNECK---NLVRLPSSINGLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSG 156
           L LL +N  +   NL  LPS       LK +   GC  LEN+P D L +   L  LD+S 
Sbjct: 604 LRLLQINNVELEGNLKLLPSE------LKWIQWKGC-PLENLPPDFLAR--QLSVLDLSE 654

Query: 157 TAIRRPTS--SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP---- 210
           + IR+  +  +  + +NL+ +   GC+   A      H     L    C + + +P    
Sbjct: 655 SGIRQVQTLRNKMVDENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVG 714

Query: 211 ---------------------SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                                 ++G+  L KL LS C    + +P +I  + SLKEL L+
Sbjct: 715 NLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS-DLSVLPENIGAMTSLKELLLD 773

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGA 304
                 LP SI+ L NLE L L  CK +Q LP     L+     ++      +L +  G 
Sbjct: 774 GTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 832

Query: 305 LK--------LCRSKYTIINCIDSLKLLRK---NGLAISML 334
           LK         C S   I + I+ LK L+K   NG A+  L
Sbjct: 833 LKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 873



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648  SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
            S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 848  SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 907

Query: 695  ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                      E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 908  LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 967

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 968  PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 1026

Query: 805  ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                     R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 1027 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 1073



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------- 692
           + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK             
Sbjct: 753 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKS 812

Query: 693 ---------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
                     L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+  
Sbjct: 813 LEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEE 872

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTI 772
           LP     L      +  DCK LK +PS+I
Sbjct: 873 LPLKPSSLPSLYDFSAGDCKFLKQVPSSI 901



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 819 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 877

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 878 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 937

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 938 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 984


>gi|186478922|ref|NP_174037.3| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
 gi|332192668|gb|AEE30789.1| transmembrane receptors / ATP binding protein [Arabidopsis thaliana]
          Length = 1384

 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 203/464 (43%), Gaps = 105/464 (22%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
            + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 761  IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 820

Query: 40   -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
              L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 821  TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 880

Query: 93   ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                              + IE LP        +  L L  CK 
Sbjct: 881  PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 940

Query: 112  LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
            L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 941  LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 999

Query: 171  NLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
            +L  LY      +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 1000 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 1059

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 1060 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 1118

Query: 274  CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA--I 331
            C+ L+ LP +P  L+ +    C SL ++    +L  +  T +N  +  K++   GL    
Sbjct: 1119 CRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL--TILTDLNLTNCAKVVDIPGLEHLT 1176

Query: 332  SMLREYLE----------LQAVSDPGHKL--SIVFPGSQIPKWF 363
            ++ R Y+            + +S    K+  ++  PG+++P WF
Sbjct: 1177 ALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF 1220



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 156/328 (47%), Gaps = 47/328 (14%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 704  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 763

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
            M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 764  MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 823

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
              LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 824  KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 879

Query: 169  MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
               L SLY FS  +     + P+S           L  SS P+  +   +  +  + +L+
Sbjct: 880  ---LPSLYDFSAGDCKFLKQVPSSIGRLNS--LLQLQLSSTPIEALPEEIGALHFIRELE 934

Query: 223  LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 935  LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 993

Query: 283  IPPNLQ-----FVRANGCSSLVTLFGAL 305
               +L+     +++    S L   FG L
Sbjct: 994  SFGDLKSLHRLYMKETLVSELPESFGNL 1021



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 2/124 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GT
Sbjct: 716 LRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGT 775

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           AI+ LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +
Sbjct: 776 AIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDL 833

Query: 800 ESLE 803
           ++L+
Sbjct: 834 KNLQ 837



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 118/281 (41%), Gaps = 58/281 (20%)

Query: 101 LELLYLNECK---NLVRLPSSINGLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSG 156
           L LL +N  +   NL  LPS       LK +   GC  LEN+P D L +   L  LD+S 
Sbjct: 604 LRLLQINNVELEGNLKLLPSE------LKWIQWKGC-PLENLPPDFLAR--QLSVLDLSE 654

Query: 157 TAIRRPTS--SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP---- 210
           + IR+  +  +  + +NL+ +   GC+   A      H     L    C + + +P    
Sbjct: 655 SGIRQVQTLRNKMVDENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVG 714

Query: 211 ---------------------SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                                 ++G+  L KL LS C    + +P +I  + SLKEL L+
Sbjct: 715 NLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCS-DLSVLPENIGAMTSLKELLLD 773

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGA 304
                 LP SI+ L NLE L L  CK +Q LP     L+     ++      +L +  G 
Sbjct: 774 GTAIKNLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDDTALKNLPSSIGD 832

Query: 305 LK--------LCRSKYTIINCIDSLKLLRK---NGLAISML 334
           LK         C S   I + I+ LK L+K   NG A+  L
Sbjct: 833 LKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 873



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648  SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
            S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 848  SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 907

Query: 695  ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                      E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 908  LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 967

Query: 745  PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 968  PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 1026

Query: 805  ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                     R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 1027 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 1073



 Score = 42.7 bits (99), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------- 692
           + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK             
Sbjct: 753 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKS 812

Query: 693 ---------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
                     L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+  
Sbjct: 813 LEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEE 872

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTI 772
           LP     L      +  DCK LK +PS+I
Sbjct: 873 LPLKPSSLPSLYDFSAGDCKFLKQVPSSI 901



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 819 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 877

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 878 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 937

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 938 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 984


>gi|154424270|gb|ABS82020.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 186/375 (49%), Gaps = 39/375 (10%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ E+PSSI   T L  L L  C +L  LP +I +L  L+ L L+ CS L K P    ++
Sbjct: 692  SLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNV 751

Query: 76   EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
              L +L L G +S+ E+PSSI  +  L+ +Y + C +LV+LPSSI    +LK L+L  C 
Sbjct: 752  TSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCS 811

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
             L   P ++  +  LE+L++SG        SI  + NL+SLY S C       S  + LP
Sbjct: 812  SLMECPSSMLNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDC-------SSLMELP 864

Query: 195  FNL--------LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
            F +        L    C   L LP S+  + +L  L L+ C      +PS ++N  +L+ 
Sbjct: 865  FTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCS-SLKELPSLVENAINLQS 923

Query: 246  LYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSL-----PQIPPNLQFVRANGCSSLV 299
            L L + ++ V LP+SI  + NL  L++ +C  L  L     P +P +L  + A  C SLV
Sbjct: 924  LSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLELNLVSHPVVPDSL-ILDAGDCESLV 982

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
                     ++   ++N  +  KL   N  A  ++   ++  A  +       + PG ++
Sbjct: 983  QRLDC--FFQNPKIVLNFANCFKL---NQEARDLI---IQTSACRNA------ILPGEKV 1028

Query: 360  PKWFMYQNEGSSITV 374
            P +F Y+  G S+TV
Sbjct: 1029 PAYFTYRATGDSLTV 1043



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 117/214 (54%), Gaps = 13/214 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++ +L  +Y DG +S+ ++PSSI   T L+ L L  C +L   P ++ +L  L  L L
Sbjct: 772 IGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNL 831

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC  L K P I  ++ +L  LYL D +S+ E+P +IE    L+ LYL+ C NL+ LPSS
Sbjct: 832 SGCLSLVKLPSI-GNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSS 890

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I  + +L++L L+GC  L+ +P  +    +L+ L +   +++    SSI+ + NL  L  
Sbjct: 891 IWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDV 950

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS 211
           S C+           L  NL+     P +L+L +
Sbjct: 951 SNCSS---------LLELNLVSHPVVPDSLILDA 975



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 6/151 (3%)

Query: 647 CSRLWEEADEFPDIV---QVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E      +IV   +V +DG + + +L  +I     L +L L  C +L   P ++ 
Sbjct: 762 CSSLLEIPSSIGNIVNLKKVYADGCSSLVQLPSSIGNNTNLKELHLLNCSSLMECPSSML 821

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKD 761
            L  L  LNLSG     + P I +  + L  ++L + +++  LP +IE  +      L  
Sbjct: 822 NLTRLEDLNLSGCLSLVKLPSIGNVIN-LQSLYLSDCSSLMELPFTIENATNLDTLYLDG 880

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           C NL  LPS+I  + +L+ +Y +GCS LK +
Sbjct: 881 CSNLLELPSSIWNITNLQSLYLNGCSSLKEL 911



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 12/146 (8%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D + + +L  +I  L  L +L LN C +L +LP +   +  L  LNLSG S   E P 
Sbjct: 711 LIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPS 770

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRS 777
              +   L +++ +G +++  LP+SI    GN  +NLK+     C +L   PS++  L  
Sbjct: 771 SIGNIVNLKKVYADGCSSLVQLPSSI----GNN-TNLKELHLLNCSSLMECPSSMLNLTR 825

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLE 803
           L  +  SGC  L  +  ++G V +L+
Sbjct: 826 LEDLNLSGCLSLVKLP-SIGNVINLQ 850



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD + + EL   IE    L  L L+GC NL  LP +I  +  L +L L+G S  +E P 
Sbjct: 854 LSDCSSLMELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPS 913

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
           +  +   L  + L + +++  LP+SI  +S     ++ +C +L  L
Sbjct: 914 LVENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSSLLEL 959



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLS 752
           LE+L      ++ L  ++LS     +E P+ +++ + L E+ L    ++  LP+SI   +
Sbjct: 646 LEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATN-LQELRLINCLSLVELPSSIGNAT 704

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             +  +L DC +L  LPS+I  L +L+ ++ + CS L  +  + G V SL+
Sbjct: 705 NLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLK 755



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-I 741
           L  L L+GC +L +LP +I  +  L +L LS  S   E P    +   L  ++L+G + +
Sbjct: 826 LEDLNLSGCLSLVKLP-SIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNL 884

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP+SI  ++      L  C +LK LPS +    +L+ +    CS L  +  ++ ++ +
Sbjct: 885 LELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIWRISN 944

Query: 802 L 802
           L
Sbjct: 945 L 945


>gi|105922376|gb|ABF81413.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1152

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 8/204 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  C+++  LP  +  ++ L+   L
Sbjct: 622 LTGIPNLESLILEGCTSLSEVHPSLGRHKKLQYVNLVNCRSIRILPSNLE-MESLKFFTL 680

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP IV +M  L+ L+LD T I ++ SSI  L GLE+L +N C+NL  +PSSI
Sbjct: 681 DGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIPSSI 740

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSLK L+LS C +L+N+P  LGKVESLE     G +  RP   I +  N    +F  
Sbjct: 741 GCLKSLKKLDLSDCSELQNIPQNLGKVESLE---FDGLSNPRPGFGIAIPGNEIPGWF-- 795

Query: 180 CNEPPASASWHLHLPFNLLGKSSC 203
            N     +S  + +P   +G  +C
Sbjct: 796 -NHQSKGSSISVQVPSWSMGFVAC 818



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 208/482 (43%), Gaps = 109/482 (22%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKLKK 67
           ++LD   I E   +++  + +  L L    N  LS  P  +S+   LR LE       K 
Sbjct: 516 IFLDMPGIKEAQWNMKAFSKMSRLRLLKIDNMQLSEGPEDLSN--NLRFLEWHSYPS-KS 572

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P  +  +++L +L++  +++ ++    +    L+++ LN    L + P  + G+ +L++
Sbjct: 573 LPAGL-QVDELVELHMANSNLEQLWYGCKSAVKLKIINLNNSLYLSKTPD-LTGIPNLES 630

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           L L GC  L  V  +LG+ + L+ +++      R   S   M++L+     GC++     
Sbjct: 631 LILEGCTSLSEVHPSLGRHKKLQYVNLVNCRSIRILPSNLEMESLKFFTLDGCSK----- 685

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                     L K         P + G +  LT L L + G+    + S I +L  L+ L
Sbjct: 686 ----------LEK--------FPDIVGNMNQLTVLHLDETGI--TKLSSSIHHLIGLEVL 725

Query: 247 YLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL 305
            +N   N  ++P+SI  L +L++L+L DC  LQ++PQ   NL  V               
Sbjct: 726 SMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQNIPQ---NLGKV--------------- 767

Query: 306 KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMY 365
                                         E LE   +S+P     I  PG++IP WF +
Sbjct: 768 ------------------------------ESLEFDGLSNPRPGFGIAIPGNEIPGWFNH 797

Query: 366 QNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE---CSMDGS 422
           Q++GSSI+V  PS+       +GF  C  F     S    LF  + A+E E     M  S
Sbjct: 798 QSKGSSISVQVPSW------SMGFVACVAFSANDESPS--LFCHFKANERENYPSPMCIS 849

Query: 423 GEGHYIYFRGKFGHVVSDHLWLLFLP----RHGHNWQFES-NLIRLSFRSISDPTWKVKR 477
            +          GH+ SDH+WL +L     +    WQ  S + I LSF+S S+P  KVK 
Sbjct: 850 CK----------GHLFSDHIWLFYLSFDYLKELQEWQHASFSNIELSFQS-SEPGVKVKN 898

Query: 478 CG 479
           CG
Sbjct: 899 CG 900



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 79/130 (60%), Gaps = 1/130 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  C+++  LP  +  ++ L    L G SK  +FP+I  + +QL  +HL+ T I 
Sbjct: 652 LQYVNLVNCRSIRILPSNLE-MESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGIT 710

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  L G  + ++ +C+NL+S+PS+I  L+SL+ +  S CS+L+N+ + LGKVESL
Sbjct: 711 KLSSSIHHLIGLEVLSMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQNIPQNLGKVESL 770

Query: 803 EVRLSSWNRP 812
           E    S  RP
Sbjct: 771 EFDGLSNPRP 780



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 34/195 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           +K G++ +RR+SP EPG  SRLW     + D+   L D T   +    IE +F    L +
Sbjct: 473 QKMGQEIIRRESPDEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----LDM 520

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-------------------- 728
            G K  +   +  S +  L  L +  + +  E PE  S+                     
Sbjct: 521 PGIKEAQWNMKAFSKMSRLRLLKIDNM-QLSEGPEDLSNNLRFLEWHSYPSKSLPAGLQV 579

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D+L+E+H+  + +  L    +      + NL +   L   P  + G+ +L  +   GC+ 
Sbjct: 580 DELVELHMANSNLEQLWYGCKSAVKLKIINLNNSLYLSKTPD-LTGIPNLESLILEGCTS 638

Query: 789 LKNVTETLGKVESLE 803
           L  V  +LG+ + L+
Sbjct: 639 LSEVHPSLGRHKKLQ 653


>gi|224127913|ref|XP_002329208.1| predicted protein [Populus trichocarpa]
 gi|222870989|gb|EEF08120.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 144/289 (49%), Gaps = 31/289 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L  + T+I E+P SI  L+ L  L L+ CK L +LP +I  LK +  +++SGCS + KFP
Sbjct: 196 LNFNETAIKELPQSIGHLSRLVALNLRECKQLGNLPDSICLLKSIVIVDVSGCSNVTKFP 255

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            I  +      LYL GT++ E PSS+  L  +  L L+ C  L  LPS+I  L  L+ LN
Sbjct: 256 NIPGNTR---YLYLSGTAVEEFPSSVGHLWRISSLDLSNCGRLKNLPSTIYELAYLEKLN 312

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           LSGC  +   P+      +++EL + GTAI    SSI     L  L+   C +       
Sbjct: 313 LSGCSSVTEFPNV---SWNIKELYLDGTAIEEIPSSIACFYKLVELHLRNCTK------- 362

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                F +L  S C +           SL KL+LS C   +   P  ++ + SL+ LYL+
Sbjct: 363 -----FEILPGSICKLK----------SLQKLNLSGCSQFK-RFPGILETMESLRYLYLD 406

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           R     LP+ I  L  L  LEL +CK L+   +   +L+ +  +GC  L
Sbjct: 407 RIGITNLPSPIRNLKGLCCLELGNCKYLEG--KYLGDLRLLNLSGCGIL 453



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/146 (45%), Positives = 84/146 (57%), Gaps = 6/146 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++ +LYLDGT+I E+PSSI     L  L L+ C     LP +I  LK L+ L LSGCS+ 
Sbjct: 328 NIKELYLDGTAIEEIPSSIACFYKLVELHLRNCTKFEILPGSICKLKSLQKLNLSGCSQF 387

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K+FP I+ +ME L  LYLD   I  +PS I  L GL  L L  CK L         L  L
Sbjct: 388 KRFPGILETMESLRYLYLDRIGITNLPSPIRNLKGLCCLELGNCKYL-----EGKYLGDL 442

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEE 151
           + LNLSGC  LE VP +LG + S+ +
Sbjct: 443 RLLNLSGCGILE-VPKSLGCLTSIRQ 467



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 114/242 (47%), Gaps = 12/242 (4%)

Query: 52  KCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN 111
           K L+ L LSGCS LK +P+   + E +  L  + T+I E+P SI  L  L  L L ECK 
Sbjct: 170 KYLKALNLSGCSNLKMYPE---TTEHVMYLNFNETAIKELPQSIGHLSRLVALNLRECKQ 226

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LP SI  LKS+  +++SGC  +   P+  G    L    +SGTA+    SS+  +  
Sbjct: 227 LGNLPDSICLLKSIVIVDVSGCSNVTKFPNIPGNTRYLY---LSGTAVEEFPSSVGHLWR 283

Query: 172 LRSLYFSGCNEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
           + SL  S C       S    L +   L  S C      P+++       LD    G   
Sbjct: 284 ISSLDLSNCGRLKNLPSTIYELAYLEKLNLSGCSSVTEFPNVSWNIKELYLD----GTAI 339

Query: 231 AAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
             IPS I   + L EL+L N   F  LP SI  L +L++L L  C + +  P I   ++ 
Sbjct: 340 EEIPSSIACFYKLVELHLRNCTKFEILPGSICKLKSLQKLNLSGCSQFKRFPGILETMES 399

Query: 290 VR 291
           +R
Sbjct: 400 LR 401



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 151/355 (42%), Gaps = 62/355 (17%)

Query: 487 EVEEFDETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSSQWKWLKPVEVAVVMIMM 546
           +++E   ++K   R  +  L ++++  VG N +V   +G        LK +   +  +  
Sbjct: 69  KIKEIKLSSKAFARMYNLRLLKIYNSEVGKNCKVYHPNG--------LKSLSDELRYLHW 120

Query: 547 RNHNLRDLDNSNEGQSL----LNRGTVEDLWYNSRAYDVFDDMPTKERASHLMCCINSMV 602
             + L+ L ++   ++L    L+   V +LW   +      +     ++ +L     S  
Sbjct: 121 DGYPLKSLPSNFHPENLVELNLSHSKVRELWKGDQKLHKHFESSKNIKSKYLKALNLSGC 180

Query: 603 SQAKAISQQGQFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLW-------EEAD 655
           S  K   +  + V  ++ +            +T  ++ PQ  G+ SRL        ++  
Sbjct: 181 SNLKMYPETTEHVMYLNFN------------ETAIKELPQSIGHLSRLVALNLRECKQLG 228

Query: 656 EFPDIVQVLSD----------------------------GTDIRELSLAIELLFGLVQLT 687
             PD + +L                              GT + E   ++  L+ +  L 
Sbjct: 229 NLPDSICLLKSIVIVDVSGCSNVTKFPNIPGNTRYLYLSGTAVEEFPSSVGHLWRISSLD 288

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
           L+ C  L+ LP TI  L YL  LNLSG S   EFP ++ +   + E++L+GTAI  +P+S
Sbjct: 289 LSNCGRLKNLPSTIYELAYLEKLNLSGCSSVTEFPNVSWN---IKELYLDGTAIEEIPSS 345

Query: 748 IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           I      +  +L++C   + LP +I  L+SL+ +  SGCS+ K     L  +ESL
Sbjct: 346 IACFYKLVELHLRNCTKFEILPGSICKLKSLQKLNLSGCSQFKRFPGILETMESL 400



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 10/151 (6%)

Query: 656 EFPD----IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP+    I ++  DGT I E+  +I   + LV+L L  C   E LP +I  LK L  LN
Sbjct: 321 EFPNVSWNIKELYLDGTAIEEIPSSIACFYKLVELHLRNCTKFEILPGSICKLKSLQKLN 380

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           LSG S+F+ FP I  + + L  ++L+   I  LP+ I  L G     L +CK L+     
Sbjct: 381 LSGCSQFKRFPGILETMESLRYLYLDRIGITNLPSPIRNLKGLCCLELGNCKYLEG---- 436

Query: 772 INGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
              L  LR++  SGC  L+ V ++LG + S+
Sbjct: 437 -KYLGDLRLLNLSGCGILE-VPKSLGCLTSI 465



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 17/193 (8%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS L    +    ++ +  + T I+EL  +I  L  LV L L  CK L  LP +I  LK 
Sbjct: 180 CSNLKMYPETTEHVMYLNFNETAIKELPQSIGHLSRLVALNLRECKQLGNLPDSICLLKS 239

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           +  +++SG S   +FP I  +   L   +L GTA+   P+S+  L      +L +C  LK
Sbjct: 240 IVIVDVSGCSNVTKFPNIPGNTRYL---YLSGTAVEEFPSSVGHLWRISSLDLSNCGRLK 296

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQ--S 824
           +LPSTI  L  L  +  SGCS +                  SWN  ++  D   +E+  S
Sbjct: 297 NLPSTIYELAYLEKLNLSGCSSVTEFPNV------------SWNIKELYLDGTAIEEIPS 344

Query: 825 AVETVTKLAKAEL 837
           ++    KL +  L
Sbjct: 345 SIACFYKLVELHL 357


>gi|359493402|ref|XP_002279700.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1186

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 207/528 (39%), Gaps = 89/528 (16%)

Query: 2    ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
             +M+ L +LY + + I E+PSSI  L  LE+L L  C N    P    ++K LR L L  
Sbjct: 670  GNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLER 729

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR------- 114
            CSK +KFP     M  L  L+L  + I E+PSSI  L  LE+L L+ C    +       
Sbjct: 730  CSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGN 789

Query: 115  ----------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
                            LP+SI  L SL+ L+L  C K E   D    +  L EL + G+ 
Sbjct: 790  MKCLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSG 849

Query: 159  IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCS 217
            I+    SI  +++L  L    C+          ++    +L      +  +   +  + +
Sbjct: 850  IKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRLQA 909

Query: 218  LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            L  LDLS C   E   P    N+ +L  L+L+      LP S+  L  LE L+LE+C+ L
Sbjct: 910  LEILDLSGCSNLER-FPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNL 968

Query: 278  QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREY 337
            +SLP                         +C  K        SLK L  NG   S L  +
Sbjct: 969  KSLPN-----------------------SICGLK--------SLKGLSLNG--CSNLEAF 995

Query: 338  LELQAVSDPGHKLSIVFPG-SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ 396
            LE+    +    L +   G S++P    +     S+ +     L  +   +G   C    
Sbjct: 996  LEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLT-- 1053

Query: 397  VPKHSTGTYLFHSYPAHE-----LECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHG 451
               H       H+ P +      + CS +          R   G      LW+ + P+ G
Sbjct: 1054 -SLHVRNCPKLHNLPDNLRSQQCISCSSE----------RYDSGSTSDPALWVTYFPQIG 1102

Query: 452  -------HNW-----QFESNLIRLSFRSISDPTWKVKRCGFHPIYMHE 487
                     W      F + +   SF    + ++K+K CG H IY  +
Sbjct: 1103 IPSKYRSRKWNNFKAHFYNRVYNASFTCGENASFKMKSCGIHLIYAQD 1150



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 30/293 (10%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L +LYL+ + I  +PSSI  L  LE+L L                        S 
Sbjct: 623 GNMECLKELYLNKSGIQALPSSIVYLASLEVLNL------------------------SY 658

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CS  KKFP+I  +ME L +LY + + I E+PSSI  L  LE+L L++C N  + P     
Sbjct: 659 CSNFKKFPEIHGNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGN 718

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           +K L+ L L  C K E  PDT   +  L  L +  + I+   SSI  +++L  L  S C+
Sbjct: 719 MKFLRELYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDLSCCS 778

Query: 182 --EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI-D 238
             E       ++    NL    +  +  +  S+  + SL  L L +C   E    SD+  
Sbjct: 779 KFEKFPEIQGNMKCLLNLFLDET-AIKELPNSIGSLTSLEMLSLRECSKFEKF--SDVFT 835

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           N+  L+EL L  +    LP SI  L +LEEL L  C   +  P+I  N++ ++
Sbjct: 836 NMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLK 888



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 26/183 (14%)

Query: 647  CSRLWEEADEFPDIVQVLS---DGTDIRELSLAIELLFGLVQLTLNGCKNLER------- 696
            CS+  + +D F ++ ++      G+ I+EL  +I  L  L +L L  C N E+       
Sbjct: 824  CSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGN 883

Query: 697  ----------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                            LP  I  L+ L  L+LSG S    FPEI  +   L  + L+ TA
Sbjct: 884  MKCLKMLCLEDTAIKELPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETA 943

Query: 741  IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
            IRGLP S+  L+     +L++C+NLKSLP++I GL+SL+ +  +GCS L+   E    +E
Sbjct: 944  IRGLPYSVGHLTRLERLDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEITEDME 1003

Query: 801  SLE 803
             LE
Sbjct: 1004 QLE 1006



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 82/157 (52%), Gaps = 11/157 (7%)

Query: 647  CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            CS L    + FP+I + +        D T IR L  ++  L  L +L L  C+NL+ LP 
Sbjct: 918  CSNL----ERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLERLDLENCRNLKSLPN 973

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
            +I  LK L  L+L+G S    F EIT   +QL  + L  T I  LP+SIE L G     L
Sbjct: 974  SICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELPSSIEHLRGLKSLEL 1033

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             +C+NL +LP++I  L  L  ++   C KL N+ + L
Sbjct: 1034 INCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNL 1070



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 3/209 (1%)

Query: 84  DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
           D   I +  S  E L  L+ + L+  K LV++P   + + +L+ LNL GC  L  +  ++
Sbjct: 517 DVDDIYDAFSKQERLEELKGIDLSNSKQLVKMPK-FSSMSNLERLNLEGCISLRELHPSI 575

Query: 144 GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSS 202
           G ++SL  L++ G    R   S    ++L  LY + C         H ++     L  + 
Sbjct: 576 GDLKSLTYLNLGGCEQLRSFLSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNK 635

Query: 203 CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
             +  +  S+  + SL  L+LS C       P    N+  LKELY NR+    LP+SI  
Sbjct: 636 SGIQALPSSIVYLASLEVLNLSYCS-NFKKFPEIHGNMECLKELYFNRSGIQELPSSIVY 694

Query: 263 LLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           L +LE L L DC   +  P+I  N++F+R
Sbjct: 695 LASLEVLNLSDCSNFEKFPEIHGNMKFLR 723



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L LN    ++ LP +I  L  L  LNLS  S F++FPEI  + + L E++   + I+
Sbjct: 628 LKELYLNK-SGIQALPSSIVYLASLEVLNLSYCSNFKKFPEIHGNMECLKELYFNRSGIQ 686

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET---LGKV 799
            LP+SI  L+   + NL DC N +  P     ++ LR +Y   CSK +   +T   +G +
Sbjct: 687 ELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLERCSKFEKFPDTFTYMGHL 746

Query: 800 ESLEVRLS 807
             L +R S
Sbjct: 747 RGLHLRES 754



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L+LS  SKF +FPEI  +   LL + L+ TAI+ LP SI  L+ 
Sbjct: 756 IKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTS 815

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLR--MMYPSGCSKLKNVTETLGKVESLEVRLSS--W 809
             + +L++C   +        +  LR   +Y SG  +L      L  +E L +R  S   
Sbjct: 816 LEMLSLRECSKFEKFSDVFTNMGRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFE 875

Query: 810 NRPKMQNDFDCVEQSAVE 827
             P++Q +  C++   +E
Sbjct: 876 KFPEIQGNMKCLKMLCLE 893



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 26/161 (16%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + I+EL  +I  L  L  L L+ C N E+ P     +K+L  L L   SKF +FP+  + 
Sbjct: 683 SGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLERCSKFEKFPDTFTY 742

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSG----------------NILSNLK-------DCKN 764
              L  +HL  + I+ LP+SI  L                   I  N+K       D   
Sbjct: 743 MGHLRGLHLRESGIKELPSSIGYLESLEILDLSCCSKFEKFPEIQGNMKCLLNLFLDETA 802

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLK---NVTETLGKVESL 802
           +K LP++I  L SL M+    CSK +   +V   +G++  L
Sbjct: 803 IKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNMGRLREL 843



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 46/247 (18%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL--------- 679
           ++ G   +R +   +P   SRLW+      DI    S    + EL   I+L         
Sbjct: 494 QEMGWAIIREECLGDPCKWSRLWD----VDDIYDAFSKQERLEELK-GIDLSNSKQLVKM 548

Query: 680 -----LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR--------------- 719
                +  L +L L GC +L  L  +I  LK L+ LNL G  + R               
Sbjct: 549 PKFSSMSNLERLNLEGCISLRELHPSIGDLKSLTYLNLGGCEQLRSFLSSMKFESLEVLY 608

Query: 720 --------EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
                   +FPEI  + + L E++L  + I+ LP+SI  L+   + NL  C N K  P  
Sbjct: 609 LNCCPNLKKFPEIHGNMECLKELYLNKSGIQALPSSIVYLASLEVLNLSYCSNFKKFPEI 668

Query: 772 INGLRSLRMMY--PSGCSKLKNVTETLGKVESLEVR-LSSWNR-PKMQNDFDCVEQSAVE 827
              +  L+ +Y   SG  +L +    L  +E L +   S++ + P++  +   + +  +E
Sbjct: 669 HGNMECLKELYFNRSGIQELPSSIVYLASLEVLNLSDCSNFEKFPEIHGNMKFLRELYLE 728

Query: 828 TVTKLAK 834
             +K  K
Sbjct: 729 RCSKFEK 735


>gi|357516577|ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1406

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 195/455 (42%), Gaps = 94/455 (20%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL------------------- 41
            +  +K L  L  D T+I ++P SI  LT LE L L  C +L                   
Sbjct: 738  IGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLY 797

Query: 42   ----SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                  LP T+  LK L  L L GC  L   P  + ++E L++L    + I E+PS+I  
Sbjct: 798  ETGLQELPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTELLASNSGIKELPSTIGS 857

Query: 98   LPGLELLYLNECK---------------------NLVR-LPSSINGLKSLKTLNLSGCCK 135
            L  L  L + +CK                       +R LP  I  LK L+ L +  C  
Sbjct: 858  LSYLRTLLVRKCKLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSN 917

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASAS---- 188
            LE++P+++G + SL  L++    IR    SI L++NL +L  S C    + PAS      
Sbjct: 918  LESLPESIGYLTSLNTLNIINGNIRELPVSIGLLENLVNLTLSRCRMLKQLPASIGNLKS 977

Query: 189  -WHLHLP----------FNLLGKSS----------CPVAL-------MLPSLTGVCSLTK 220
              HL +           F +L               P+++       + PS   +  L +
Sbjct: 978  LCHLKMEETAMVDLPESFGMLSSLRTLRMAKRPHLVPISVKNTGSFVLPPSFCNLTLLHE 1037

Query: 221  LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
            LD     L    IP D + L  L+ L L++NNF +LP+S+ GL  L+EL L +C  L SL
Sbjct: 1038 LDARAWRLS-GKIPDDFEKLSLLETLKLDQNNFHSLPSSLKGLSILKELSLPNCTELISL 1096

Query: 281  PQIPPNLQFVRANGCSSLVTLFGALKL----------CRSKYTI--INCIDSLKLLRKNG 328
            P +P +L  + A+ C +L T+     L          C     I  + C+ SLK L  +G
Sbjct: 1097 PLLPSSLIKLNASNCYALETIHDMSSLESLEELELTNCEKVADIPGLECLKSLKRLYLSG 1156

Query: 329  LAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWF 363
                  +    L  V+    + ++  PG+++P+WF
Sbjct: 1157 CNACSSKVCKRLSKVALRNFE-NLSMPGTKLPEWF 1190



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 141/296 (47%), Gaps = 24/296 (8%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++T +  SI  LT L  L L  C+NL  LP  +S LK L +L LS CSKLK  P+ +  +
Sbjct: 682 NLTRIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHLESLILSECSKLKALPENIGML 741

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR--------------------- 114
           + L  L  D T+I ++P SI  L  LE L L+ C +L R                     
Sbjct: 742 KSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETGL 801

Query: 115 --LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP+++  LK+L+ L+L GC  L  +PD++G +ESL EL  S + I+   S+I  +  L
Sbjct: 802 QELPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYL 861

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           R+L    C       S+        L      +  +   +  +  L KL++ +C   E +
Sbjct: 862 RTLLVRKCKLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSNLE-S 920

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           +P  I  L SL  L +   N   LP SI  L NL  L L  C+ L+ LP    NL+
Sbjct: 921 LPESIGYLTSLNTLNIINGNIRELPVSIGLLENLVNLTLSRCRMLKQLPASIGNLK 976



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 122/285 (42%), Gaps = 63/285 (22%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLK--------KFPQIVASMEDLSKLYLDGTSIA 89
           C +L +LP      + L  L+LS   K+K        K P+ +  M +LS  Y     +A
Sbjct: 613 CISLDTLP------RELAVLDLSNGQKIKSLWGLKSQKVPENLMVM-NLSNCY----QLA 661

Query: 90  EVPSSIELLPGLELLYLNECKNLVR------------------------LPSSINGLKSL 125
            +P  +    GLE + L  C NL R                        LPS ++GLK L
Sbjct: 662 AIPD-LSWCLGLEKINLANCINLTRIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHL 720

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
           ++L LS C KL+ +P+ +G ++SL+ L    TAI +   SIF +  L  L    C+    
Sbjct: 721 ESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCS---- 776

Query: 186 SASWHLHLPFNLLGKSSCPVALM--------LPSLTGVC-SLTKLDLSDCGLGEAAIPSD 236
               HL    + +GK      L         LP+  G   +L KL L  C  G   +P  
Sbjct: 777 ----HLRRLPDCIGKLCALQELSLYETGLQELPNTVGFLKNLEKLSLMGCE-GLTLMPDS 831

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           I NL SL EL  + +    LP++I  L  L  L +  CK L  LP
Sbjct: 832 IGNLESLTELLASNSGIKELPSTIGSLSYLRTLLVRKCK-LSKLP 875



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 2/143 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L++  ++  +  +I  L  L  L L  C+NL  LP  +S LK+L +L LS  SK +  PE
Sbjct: 677 LANCINLTRIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHLESLILSECSKLKALPE 736

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR--MM 781
                  L  +  + TAI  LP SI  L+      L  C +L+ LP  I  L +L+   +
Sbjct: 737 NIGMLKSLKTLAADKTAIVKLPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSL 796

Query: 782 YPSGCSKLKNVTETLGKVESLEV 804
           Y +G  +L N    L  +E L +
Sbjct: 797 YETGLQELPNTVGFLKNLEKLSL 819



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 24/131 (18%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           S+L +       I+++  DGT IR L   I  L  L +L +  C NLE LP +I  L  L
Sbjct: 872 SKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSNLESLPESIGYLTSL 931

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
           +TLN+                       + G  IR LP SI LL   +   L  C+ LK 
Sbjct: 932 NTLNI-----------------------INGN-IRELPVSIGLLENLVNLTLSRCRMLKQ 967

Query: 768 LPSTINGLRSL 778
           LP++I  L+SL
Sbjct: 968 LPASIGNLKSL 978



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 24/137 (17%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNL-----------------------ERLPRTISAL 704
           T ++EL   +  L  L +L+L GC+ L                       + LP TI +L
Sbjct: 799 TGLQELPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTELLASNSGIKELPSTIGSL 858

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
            YL TL L    K  + P+   +   ++E+ L+GT IR LP  I  L       + +C N
Sbjct: 859 SYLRTL-LVRKCKLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSN 917

Query: 765 LKSLPSTINGLRSLRMM 781
           L+SLP +I  L SL  +
Sbjct: 918 LESLPESIGYLTSLNTL 934


>gi|298953299|gb|ADI99934.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 1178

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 202/438 (46%), Gaps = 70/438 (15%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             ++  +L +LYL   T++  +  S+  L  L +L L GC NL  LP     L  L+ L L
Sbjct: 627  FSAASNLEELYLTNCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNL 686

Query: 60   SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            S C KL+K P + +S  +L+ L++ + T++  +  S+  L  LE LYL +C NLV+L  S
Sbjct: 687  SYCKKLEKIPDL-SSASNLTSLHIYECTNLRVIHESVGSLDKLEGLYLKQCTNLVKL-PS 744

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
               LKSL  L+LSGCCKLE+ P     ++SL  LD+  TAI+   SSI  +  L +L  +
Sbjct: 745  YLSLKSLLCLSLSGCCKLESFPTIAKNMKSLRTLDLDFTAIKELPSSIRYLTELWTLKLN 804

Query: 179  GC-NEPPASASWHLHLPFNLLGKSSCPVALML-----PSLTGVCS--------------- 217
            GC N      + +L      L  S C +  M      P++  VCS               
Sbjct: 805  GCTNLISLPNTIYLLRSLENLLLSGCSIFGMFPDKWNPTIQPVCSPSKMMETALWSLKVP 864

Query: 218  -----------LTKLDLSDCGLGEAAIPSDI-DNLHSLKELYLNRNNFVTLPASISGLLN 265
                        T LDL  C +  A     + D    L +L L+ N F +LP+ +   ++
Sbjct: 865  HFLVPNESFSHFTLLDLQSCNISNANFLDILCDVAPFLSDLRLSENKFSSLPSCLHKFMS 924

Query: 266  LEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLR 325
            L  LEL +CK LQ +P +P ++Q + A GC S         L R    I++ I      +
Sbjct: 925  LWNLELRNCKFLQEIPSLPESIQKMDACGCES---------LSRIPDNIVDIIS-----K 970

Query: 326  KNGLAISML-REYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVN 384
            K  L +  + RE+L                 G +IP+WF Y+   + ++    S+ +  +
Sbjct: 971  KQDLTMGEISREFL---------------LTGIEIPEWFSYKTTSNLVSA---SFRHYPD 1012

Query: 385  KVVGFAICCVFQVPKHST 402
                 A C  F+V  +S+
Sbjct: 1013 MERTLAACVSFKVNGNSS 1030



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 105/232 (45%), Gaps = 32/232 (13%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ ++LS  + L+K P   A+  +L +LYL   T++  +  S+  L  L +L L+ C NL
Sbjct: 610 LKYVDLSYSTFLEKIPNFSAA-SNLEELYLTNCTNLGMIDKSVFSLDKLTVLNLDGCSNL 668

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKN 171
            +LP     L SLK LNLS C KLE +PD L    +L  L +   T +R    S+  +  
Sbjct: 669 KKLPRGYFMLSSLKKLNLSYCKKLEKIPD-LSSASNLTSLHIYECTNLRVIHESVGSLDK 727

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLG--KSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
           L  LY   C               NL+         +L+  SL+G C L           
Sbjct: 728 LEGLYLKQCT--------------NLVKLPSYLSLKSLLCLSLSGCCKL----------- 762

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
             + P+   N+ SL+ L L+      LP+SI  L  L  L+L  C  L SLP
Sbjct: 763 -ESFPTIAKNMKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLP 813



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T++R +  ++  L  L  L L  C NL +LP  +S    L  L+LSG  K   FP I  +
Sbjct: 713 TNLRVIHESVGSLDKLEGLYLKQCTNLVKLPSYLSLKS-LLCLSLSGCCKLESFPTIAKN 771

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L  + L+ TAI+ LP+SI  L+      L  C NL SLP+TI  LRSL  +  SGCS
Sbjct: 772 MKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLPNTIYLLRSLENLLLSGCS 831



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L++ T++  +  ++  L  L  L L+GC NL++LPR    L  L  LNLS   K  + P+
Sbjct: 638 LTNCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKKLEKIPD 697

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNL 765
           ++S+ + L  +H+ E T +R +  S+  L       LK C NL
Sbjct: 698 LSSASN-LTSLHIYECTNLRVIHESVGSLDKLEGLYLKQCTNL 739



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 7/76 (9%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FP I + +        D T I+EL  +I  L  L  L LNGC NL  LP TI  L+ L
Sbjct: 763 ESFPTIAKNMKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLPNTIYLLRSL 822

Query: 708 STLNLSGLSKFREFPE 723
             L LSG S F  FP+
Sbjct: 823 ENLLLSGCSIFGMFPD 838


>gi|147845097|emb|CAN78476.1| hypothetical protein VITISV_009816 [Vitis vinifera]
          Length = 826

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/157 (49%), Positives = 94/157 (59%), Gaps = 4/157 (2%)

Query: 30  LELLTLKGCKNLSSLPVTISS----LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG 85
           LE L L GC +L       S      K L  L LSGCS+L+KFP I A+ME L +L+L+G
Sbjct: 652 LETLNLYGCTSLREDASLFSQNHWIGKKLEVLNLSGCSRLEKFPDIKANMESLLELHLEG 711

Query: 86  TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
           T+I E+PSS+  L GL LL +  CKNL  LP  I  LKSLKTL LSGC KLE +P+    
Sbjct: 712 TAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICDLKSLKTLILSGCSKLERLPEITEV 771

Query: 146 VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           +E LEEL + GT+IR    SI  +K L  L    C E
Sbjct: 772 MEHLEELLLDGTSIRELPRSILRLKGLVLLNLRKCKE 808



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/123 (56%), Positives = 86/123 (69%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           A+M+ L +L+L+GT+I E+PSS+  L GL LL +K CKNL  LP  I  LK L+TL LSG
Sbjct: 699 ANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICDLKSLKTLILSG 758

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSKL++ P+I   ME L +L LDGTSI E+P SI  L GL LL L +CK L  L +SI G
Sbjct: 759 CSKLERLPEITEVMEHLEELLLDGTSIRELPRSILRLKGLVLLNLRKCKELRTLRNSICG 818

Query: 122 LKS 124
           LKS
Sbjct: 819 LKS 821



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 84/139 (60%), Gaps = 11/139 (7%)

Query: 646 NCSRLWEEADEFPDI-------VQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
            CSRL    ++FPDI       +++  +GT I EL  ++  L GLV L +  CKNL+ LP
Sbjct: 687 GCSRL----EKFPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILP 742

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
             I  LK L TL LSG SK    PEIT   + L E+ L+GT+IR LP SI  L G +L N
Sbjct: 743 GRICDLKSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTSIRELPRSILRLKGLVLLN 802

Query: 759 LKDCKNLKSLPSTINGLRS 777
           L+ CK L++L ++I GL+S
Sbjct: 803 LRKCKELRTLRNSICGLKS 821



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/125 (45%), Positives = 75/125 (60%), Gaps = 4/125 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISA----LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L  L L GC +L       S      K L  LNLSG S+  +FP+I ++ + LLE+HLEG
Sbjct: 652 LETLNLYGCTSLREDASLFSQNHWIGKKLEVLNLSGCSRLEKFPDIKANMESLLELHLEG 711

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           TAI  LP+S+  L G +L N+K CKNLK LP  I  L+SL+ +  SGCSKL+ + E    
Sbjct: 712 TAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRICDLKSLKTLILSGCSKLERLPEITEV 771

Query: 799 VESLE 803
           +E LE
Sbjct: 772 MEHLE 776



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 41/261 (15%)

Query: 56  TLELSGCSKLKKFPQIVASMEDLS--KLYLDGTS-----IAEVPSSIELLPGLELLYLN- 107
           + ++S   +++   + +  M +L   ++Y DG S        +P   E  P  EL YL+ 
Sbjct: 531 SFDVSASKEIQITSEALKKMTNLRLLRVYWDGLSSYDSNTVHLPEEFEF-PSYELRYLHW 589

Query: 108 ECKNLVRLPSSINGLK----SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           +  +L  LPS+ NG K    SLK  +L+   K          +E+L+ +D+S +      
Sbjct: 590 DGWSLESLPSNFNGKKLVELSLKHSSLNHLWKGNKC------LENLKVMDLSHSXYLVEC 643

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
             +    +L +L   GC      AS  L    + +GK                 L  L+L
Sbjct: 644 PDVSGAPSLETLNLYGCTSLREDAS--LFSQNHWIGKK----------------LEVLNL 685

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
           S C   E   P    N+ SL EL+L     + LP+S+  L  L  L ++ CK L+ LP  
Sbjct: 686 SGCSRLEK-FPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGR 744

Query: 284 PPNLQFVRA---NGCSSLVTL 301
             +L+ ++    +GCS L  L
Sbjct: 745 ICDLKSLKTLILSGCSKLERL 765


>gi|297791235|ref|XP_002863502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309337|gb|EFH39761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1161

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 172/386 (44%), Gaps = 96/386 (24%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           L++L L+GC +L SL    S  K L+TL LSGCS  K+FP I    E+L  LYLDGT+I+
Sbjct: 683 LQVLNLEGCTSLKSLGDVNS--KSLKTLTLSGCSNFKEFPLIP---ENLEALYLDGTAIS 737

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           ++P                  NLV        L+ L +LN+  C KL+N+P  +G+++SL
Sbjct: 738 QLPD-----------------NLV-------NLQRLVSLNMKDCQKLKNIPTFVGELKSL 773

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           ++L +SG               L+   FS  N+          L F LL  +S      L
Sbjct: 774 QKLVLSGC--------------LKLKEFSEINKSS--------LKFLLLDGTSIKTMPQL 811

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEE 268
           PS+  +C                               L+RN N   LPA I+ L  L  
Sbjct: 812 PSVQYLC-------------------------------LSRNDNLSYLPAGINQLSQLTR 840

Query: 269 LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINC--IDS 320
           L+L+ CK+L S+P++PPNLQ++ A+GCSSL T+   L         R  +   NC  ++ 
Sbjct: 841 LDLKYCKKLTSIPELPPNLQYLDAHGCSSLNTVAKPLARIMPTVQNRCTFNFTNCDNLEQ 900

Query: 321 LKLLRKNGLAISMLREYLELQAVSDPGHK----LSIVFPGSQIPKWFMYQNEGSSITVTR 376
             +      A S  +   + +   + G       +  FPG ++P WF ++  GS +    
Sbjct: 901 AAMDEITSFAQSKCQFLSDARKHYNEGFSSEALFTTCFPGCEVPSWFSHEERGSLMQRKL 960

Query: 377 PSYLYNVNKVVGFAICCVFQVPKHST 402
             + ++   + G A+C V   P   T
Sbjct: 961 LPHWHD-KSLSGIALCAVVSFPAGQT 985



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 14/188 (7%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  LYLDGT+I+++P ++  L  L  L +K C+ L ++P  +  LK L+ L LSGC K
Sbjct: 724 ENLEALYLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSLQKLVLSGCLK 783

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LK+F +I  S   L  L LDGTSI  +P     LP ++ L L+   NL  LP+ IN L  
Sbjct: 784 LKEFSEINKS--SLKFLLLDGTSIKTMPQ----LPSVQYLCLSRNDNLSYLPAGINQLSQ 837

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIF-LMKNLRSLYFSG 179
           L  L+L  C KL ++P+      +L+ LD  G      + +P + I   ++N  +  F+ 
Sbjct: 838 LTRLDLKYCKKLTSIPEL---PPNLQYLDAHGCSSLNTVAKPLARIMPTVQNRCTFNFTN 894

Query: 180 CNEPPASA 187
           C+    +A
Sbjct: 895 CDNLEQAA 902



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 7/147 (4%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   + P +  V L+  + +  LS  +     L  L L GC +L+ L    S  K L
Sbjct: 649 QLWEGDKDIPVLKWVDLNHSSKLCSLS-GLSKAQNLQVLNLEGCTSLKSLGDVNS--KSL 705

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            TL LSG S F+EFP I    + L  ++L+GTAI  LP ++  L   +  N+KDC+ LK+
Sbjct: 706 KTLTLSGCSNFKEFPLIP---ENLEALYLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKN 762

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +P+ +  L+SL+ +  SGC KLK  +E
Sbjct: 763 IPTFVGELKSLQKLVLSGCLKLKEFSE 789



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 33/214 (15%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP I + L     DGT I +L   +  L  LV L +  C+ L+ +P  +  LK L  L 
Sbjct: 718 EFPLIPENLEALYLDGTAISQLPDNLVNLQRLVSLNMKDCQKLKNIPTFVGELKSLQKLV 777

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRG--------------------LPASIELL 751
           LSG  K +EF EI  S  + L   L+GT+I+                     LPA I  L
Sbjct: 778 LSGCLKLKEFSEINKSSLKFL--LLDGTSIKTMPQLPSVQYLCLSRNDNLSYLPAGINQL 835

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
           S     +LK CK L S+P     L+ L      GCS L  V + L ++        ++N 
Sbjct: 836 SQLTRLDLKYCKKLTSIPELPPNLQYLD---AHGCSSLNTVAKPLARIMPTVQNRCTFNF 892

Query: 812 PKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
               N    +EQ+A++ +T  A+++    SD+ K
Sbjct: 893 TNCDN----LEQAAMDEITSFAQSKCQFLSDARK 922


>gi|227438247|gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 950

 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 111/181 (61%), Gaps = 5/181 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + S ++L  L L+G  S+  +  SI  L  L  L LK C NL S+P T S L+ L  L L
Sbjct: 731 LTSAQNLELLDLEGCKSLESISHSICYLKKLVSLNLKDCSNLESVPST-SDLESLEVLNL 789

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKL+ FP+I  ++++L   YL GT I E+PSSI+ L  LE L L   ++LV LP+S+
Sbjct: 790 SGCSKLENFPEISPNVKEL---YLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSM 846

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK L+TLNLSGC  LE  PD   K++ L+ LD+S TAIR   SSI  +  L  + F G
Sbjct: 847 CKLKHLETLNLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVG 906

Query: 180 C 180
           C
Sbjct: 907 C 907



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 82/144 (56%), Gaps = 3/144 (2%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++ +LYL GT I E+PSSI+ L  LE L L+  ++L  LP ++  LK L TL LSGCS L
Sbjct: 804 NVKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLSGCSSL 863

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK-- 123
           + FP     M+ L  L L  T+I E+PSSI  L  LE +    CK+LVRLP +   L+  
Sbjct: 864 EYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVGCKSLVRLPDNAWSLRFK 923

Query: 124 -SLKTLNLSGCCKLENVPDTLGKV 146
              + ++     KL N  D L KV
Sbjct: 924 VEFRQIDTEKFSKLWNRLDWLKKV 947



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 112/227 (49%), Gaps = 7/227 (3%)

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +KK  +   S+E+L K+ L  +S       +     LELL L  CK+L  +  SI  LK 
Sbjct: 701 VKKLWKGKKSLENLKKMRLSYSSQLTKLPRLTSAQNLELLDLEGCKSLESISHSICYLKK 760

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--NE 182
           L +LNL  C  LE+VP T   +ESLE L++SG +       I    N++ LY  G    E
Sbjct: 761 LVSLNLKDCSNLESVPST-SDLESLEVLNLSGCSKLENFPEI--SPNVKELYLGGTMIRE 817

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            P+S   +L L   L  ++S  + ++  S+  +  L  L+LS C   E   P     +  
Sbjct: 818 IPSSIK-NLVLLEKLDLENSRHLVILPTSMCKLKHLETLNLSGCSSLE-YFPDFSRKMKC 875

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
           LK L L+R     LP+SIS L+ LEE+    CK L  LP    +L+F
Sbjct: 876 LKSLDLSRTAIRELPSSISYLIALEEVRFVGCKSLVRLPDNAWSLRF 922



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 3/156 (1%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS+L    +  P++ ++   GT IRE+  +I+ L  L +L L   ++L  LP ++  LK+
Sbjct: 792 CSKLENFPEISPNVKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKH 851

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L TLNLSG S    FP+ +     L  + L  TAIR LP+SI  L          CK+L 
Sbjct: 852 LETLNLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLIALEEVRFVGCKSLV 911

Query: 767 SLPSTINGLR---SLRMMYPSGCSKLKNVTETLGKV 799
            LP     LR     R +     SKL N  + L KV
Sbjct: 912 RLPDNAWSLRFKVEFRQIDTEKFSKLWNRLDWLKKV 947



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 26/141 (18%)

Query: 686 LTLNGCKNLERLPRTI-----------------------SALKYLSTLNLSGLSKFREFP 722
           L L GCK+LE +  +I                       S L+ L  LNLSG SK   FP
Sbjct: 740 LDLEGCKSLESISHSICYLKKLVSLNLKDCSNLESVPSTSDLESLEVLNLSGCSKLENFP 799

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           EI+ +   + E++L GT IR +P+SI+ L      +L++ ++L  LP+++  L+ L  + 
Sbjct: 800 EISPN---VKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPTSMCKLKHLETLN 856

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCS L+   +   K++ L+
Sbjct: 857 LSGCSSLEYFPDFSRKMKCLK 877


>gi|224093616|ref|XP_002309943.1| predicted protein [Populus trichocarpa]
 gi|222852846|gb|EEE90393.1| predicted protein [Populus trichocarpa]
          Length = 451

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 192/435 (44%), Gaps = 67/435 (15%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           LP LE L L  C +L+ +  SI  L SL  LNL GC  L  +P ++G ++SL++L +SG 
Sbjct: 1   LPSLERLILKYCISLIEVHESIGNLGSLFLLNLKGCKNLIKLPRSIGLLKSLDKLILSGC 60

Query: 158 AI--RRPTSSIFLMKNLRSLYFSGCNEPPAS--ASWHLH-----LPFNLLGKSSCPVALM 208
           +     P      ++ L+ L     +E   +   SW L+      P   L  +S      
Sbjct: 61  SKLDELPEE----LRTLQCLRVLRADETSINRLQSWQLNWWSWLFPRRSLQSTSFSFTF- 115

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           LP     CSL KL L+DC + +  IP D+ +L +L+ L L++N   TLP S++ L  L++
Sbjct: 116 LP-----CSLVKLSLADCNITDDVIPDDLSSLPALEHLNLSKNPIQTLPESMNSLSMLQD 170

Query: 269 LELEDCKRLQSLPQIPPNLQFVRAN-----------------------GCSSLVTLFGAL 305
           L L  C+ L+SLP++P +L+ +RA                        GC  LV + G  
Sbjct: 171 LLLNHCRSLRSLPELPTSLKKLRAEKCTKLERIANLPNLLRSLRLNLIGCKRLVQVQGLF 230

Query: 306 KLCRSKYTIINCIDSLKLLRKNGL---------AISMLREYLELQAVSDPGHKLSIVFPG 356
            L   +      I +L L     L         +I+       LQ + + G   SI  PG
Sbjct: 231 NLEMMREFDAKMIYNLHLFNIESLGSIEVEMINSITKTSRITRLQILQEQG-IFSIFLPG 289

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           S++P W+ +Q + +S++   P       K+ G  +C V+ +   +T       YP     
Sbjct: 290 SEVPSWYSHQKQNNSVSFAVPP--LPSRKIRGLNLCIVYGL--RNTDKKCATLYPPDAEI 345

Query: 417 CSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLI----RLSFRSISDPT 472
            +     +  Y         +  D LWL        +W+F ++ +    +++  +   P 
Sbjct: 346 SNKTKVLKWSYNPIVYGVPQIGEDMLWL-------SHWRFGTDQLEVGDQVNVSASVTPD 398

Query: 473 WKVKRCGFHPIYMHE 487
           ++VK+CG H +Y  E
Sbjct: 399 FQVKKCGVHLVYEQE 413



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 39/73 (53%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +I  L  L  L L GCKNL +LPR+I  LK L  L LSG SK  E PE   +   L
Sbjct: 17  EVHESIGNLGSLFLLNLKGCKNLIKLPRSIGLLKSLDKLILSGCSKLDELPEELRTLQCL 76

Query: 732 LEIHLEGTAIRGL 744
             +  + T+I  L
Sbjct: 77  RVLRADETSINRL 89



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 9/72 (12%)

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV-- 804
           SI  L    L NLK CKNL  LP +I  L+SL  +  SGCSKL  + E L  ++ L V  
Sbjct: 21  SIGNLGSLFLLNLKGCKNLIKLPRSIGLLKSLDKLILSGCSKLDELPEELRTLQCLRVLR 80

Query: 805 -------RLSSW 809
                  RL SW
Sbjct: 81  ADETSINRLQSW 92


>gi|449443196|ref|XP_004139366.1| PREDICTED: LOW QUALITY PROTEIN: protein SUPPRESSOR OF npr1-1,
            CONSTITUTIVE 1-like [Cucumis sativus]
          Length = 1253

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 221/487 (45%), Gaps = 57/487 (11%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L +LYL+  T++  +P S+  L  L  L L  C NL  LP  +  LK L+ L+L+ C K
Sbjct: 608  NLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYLM-LKSLKVLKLAYCKK 666

Query: 65   LKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L+K P   ++  +L KLYL + T++  +  SI  L  L  L L +C NL +LPS +  LK
Sbjct: 667  LEKLPDF-STASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYLT-LK 724

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE 182
            SL+ LNL+ C KLE +PD      +L+ L +   T +R    SI  + +L +L    C  
Sbjct: 725  SLEYLNLAHCKKLEEIPD-FSSALNLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTN 783

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                 S+           S C    M P +   + SL  L L    + E  +PS I  L 
Sbjct: 784  LEKLPSYLKLKSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIRE--LPSSIGYLT 841

Query: 242  SLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            +L  L L+   N ++LP++I  L++L  L+L +CK LQ +P +P  +Q + A GC    T
Sbjct: 842  ALLVLNLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHCIQKMDATGC----T 897

Query: 301  LFGALKLCRSKYTIINCIDSLKLLRKNGLAI-SMLREYLELQAVSDPGHKLSIVFPGSQI 359
            L G     RS   I++ I S     K  +A+    RE+               +   + I
Sbjct: 898  LLG-----RSPDNIMDIISS-----KQDVALGDFTREF---------------ILMNTGI 932

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
            P+WF YQ+  +SI   R S+ +++N     A     QV        +  SY    L    
Sbjct: 933  PEWFSYQSISNSI---RVSFRHDLNMERILATYATLQV--------VGDSYQGMALVSCK 981

Query: 420  DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFES---NLIRLSFRSI--SDPTWK 474
               G      F  KF    S++ WL+       +   E    N + + F  +  S+ T  
Sbjct: 982  IFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTFSTSLEMNEWNHVTVWFEVVKCSEATVT 1041

Query: 475  VKRCGFH 481
            +K CG H
Sbjct: 1042 IKCCGVH 1048



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 5/160 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +S  +L  LYL+  T++  +  SI  L  L  L L+ C NL  LP  +  LK LR  EL
Sbjct: 743 FSSALNLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLK-LKSLRHFEL 801

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGC KL+ FP+I  +M+ L  L+LD T+I E+PSSI  L  L +L L+ C NL+ LPS+I
Sbjct: 802 SGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPSTI 861

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             L SL  L L  C  L+ +P+       ++++D +G  +
Sbjct: 862 YLLMSLWNLQLRNCKFLQEIPNL---PHCIQKMDATGCTL 898



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 8/231 (3%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++  +L  LYL + T++  +  SI  L+ L  L L  C NL  LP  ++ LK L  L L
Sbjct: 673 FSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYLT-LKSLEYLNL 731

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           + C KL++ P   +++ +L  LYL+  T++  +  SI  L  L  L L +C NL +LPS 
Sbjct: 732 AHCKKLEEIPDFSSAL-NLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSY 790

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  LKSL+   LSGC KLE  P     ++SL  L +  TAIR   SSI  +  L  L   
Sbjct: 791 LK-LKSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSIGYLTALLVLNLH 849

Query: 179 GC-NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           GC N     ++ +L +    L   +C     +P+L     + K+D + C L
Sbjct: 850 GCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHC--IQKMDATGCTL 898



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 7/186 (3%)

Query: 612 GQFVKMISVDSG-CMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQV----LSD 666
           G   K++++D G C +  K     T++        +C +L EE  +F   + +    L  
Sbjct: 698 GSLSKLVTLDLGKCSNLEKLPSYLTLKSLEYLNLAHCKKL-EEIPDFSSALNLKSLYLEQ 756

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            T++R +  +I  L  LV L L  C NLE+LP  +  LK L    LSG  K   FP+I  
Sbjct: 757 CTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLK-LKSLRHFELSGCHKLEMFPKIAE 815

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           +   L+ +HL+ TAIR LP+SI  L+  ++ NL  C NL SLPSTI  L SL  +    C
Sbjct: 816 NMKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLMSLWNLQLRNC 875

Query: 787 SKLKNV 792
             L+ +
Sbjct: 876 KFLQEI 881



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 4/140 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + T++R +  +I  L  LV L L  C NLE+LP  ++ LK L  LNL+   K  E P+
Sbjct: 684 LKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYLT-LKSLEYLNLAHCKKLEEIPD 742

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            +S+ + L  ++LE  T +R +  SI  L+  +  +L+ C NL+ LPS +  L+SLR   
Sbjct: 743 FSSALN-LKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLK-LKSLRHFE 800

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGC KL+   +    ++SL
Sbjct: 801 LSGCHKLEMFPKIAENMKSL 820



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 8/159 (5%)

Query: 641 PQEPGNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLER 696
           P    + S L E+  +FP    +    L++ T++R +  ++  L  L+ L L+ C NL +
Sbjct: 587 PHVDLSYSSLLEKIPDFPATSNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIK 646

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNI 755
           LP  +  LK L  L L+   K  + P+ +++ + L +++L E T +R +  SI  LS  +
Sbjct: 647 LPSYL-MLKSLKVLKLAYCKKLEKLPDFSTASN-LEKLYLKECTNLRMIHDSIGSLSKLV 704

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             +L  C NL+ LPS +  L+SL  +  + C KL+ + +
Sbjct: 705 TLDLGKCSNLEKLPSYLT-LKSLEYLNLAHCKKLEEIPD 742



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 35/71 (49%)

Query: 654 ADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLS 713
           A+    ++ +  D T IREL  +I  L  L+ L L+GC NL  LP TI  L  L  L L 
Sbjct: 814 AENMKSLISLHLDSTAIRELPSSIGYLTALLVLNLHGCTNLISLPSTIYLLMSLWNLQLR 873

Query: 714 GLSKFREFPEI 724
                +E P +
Sbjct: 874 NCKFLQEIPNL 884


>gi|40644189|emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]
          Length = 1147

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 182/391 (46%), Gaps = 38/391 (9%)

Query: 40   NLSSLPVTISSLKCL-RTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIEL 97
            NL+ L +  S+LK L +  ++    +  KF Q V  +  L KL L G +S+ EV  SI  
Sbjct: 627  NLAVLDMQYSNLKELWKGKKVRNMLQSPKFLQYVIYIYILEKLNLKGCSSLVEVHQSIGN 686

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            L  L+ L L  C  L  LP SI  +KSL+TLN+SGC +LE +P+++G +ESL EL   G 
Sbjct: 687  LTSLDFLNLEGCWRLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESLIELLADGI 746

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVC 216
               +  SSI  +K++R L   G +  P S+S        L+      +   LP S     
Sbjct: 747  ENEQFLSSIGQLKHVRRLSLRGYSSTPPSSS--------LISAGVLNLKRWLPTSFIQWI 798

Query: 217  SLTKLDLSDCGLGE-AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            S+ +L+L   GL + AA   D   L +L+ L L  N F +LP+ I  L  L+ L ++ CK
Sbjct: 799  SVKRLELPHGGLSDRAAKCVDFSGLSALEVLDLIGNKFSSLPSGIGFLSKLKFLSVKACK 858

Query: 276  RLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG------- 328
             L S+P +P +L  + A+ C SL  +   + +   K   IN   S  L    G       
Sbjct: 859  YLVSIPDLPSSLDCLDASYCKSLERV--RIPIEPKKELDINLYKSHSLEEIQGIEGLSNN 916

Query: 329  ---LAISMLR------EYLELQAVSDPGHKLSI-VFPGSQIPKWFMYQNEGSSITVTRPS 378
               L +   R      +   ++A+ +  H+  I   PG  +P W  Y  EG S++   P 
Sbjct: 917  IWSLEVDTSRHSPNKLQKSVVEAICNGRHRYCIHGIPGGNMPNWMSYSGEGCSLSFHIPP 976

Query: 379  YLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
              +      G     VF+ P      Y FH+
Sbjct: 977  VFH------GLVRWFVFR-PLEMDVRYYFHT 1000



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 48/219 (21%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDI-RELSLAIEL----------- 679
           GR+ V + SP++PG  +R+W + D +  + Q    GTD+ + L+L +             
Sbjct: 520 GREVVCKASPKQPGKRTRIWNQEDAWNVLEQQKVRGTDVVKGLALDVRASEAKSLSAGSF 579

Query: 680 --LFGLVQLTLNGC----------KNLERLPRTISALKYLS---TL-NLSGL----SKFR 719
             +  L  L +NG           K L  +      LKYL    TL NL+ L    S  +
Sbjct: 580 AEMKCLNLLQINGVHLTGSLKLFSKELMWICWHECPLKYLPFDFTLDNLAVLDMQYSNLK 639

Query: 720 EFPEITSSRDQL---------LEIH-LEGTAIRGLPASIELLS--GNILS----NLKDCK 763
           E  +    R+ L         + I+ LE   ++G  + +E+    GN+ S    NL+ C 
Sbjct: 640 ELWKGKKVRNMLQSPKFLQYVIYIYILEKLNLKGCSSLVEVHQSIGNLTSLDFLNLEGCW 699

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LK+LP +I  ++SL  +  SGCS+L+ + E++G +ESL
Sbjct: 700 RLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESL 738



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 28/136 (20%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +I  L  L  L L GC  L+ LP +I  +K L TLN+SG S+  + PE     + L
Sbjct: 679 EVHQSIGNLTSLDFLNLEGCWRLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESL 738

Query: 732 LEI------------------HLEGTAIRGL---PASIELLSGNILSNLKDCKNLKSLPS 770
           +E+                  H+   ++RG    P S  L+S  +L NLK     + LP+
Sbjct: 739 IELLADGIENEQFLSSIGQLKHVRRLSLRGYSSTPPSSSLISAGVL-NLK-----RWLPT 792

Query: 771 T-INGLRSLRMMYPSG 785
           + I  +   R+  P G
Sbjct: 793 SFIQWISVKRLELPHG 808


>gi|105922434|gb|ABF81416.1| NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 925

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 106/172 (61%), Gaps = 4/172 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L+   L
Sbjct: 479 LTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNLE-MESLKVFTL 537

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GC KL+KFP +V +M  L  L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 538 DGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSI 597

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           + LKSLK L+LSGC +L+N+P  LGKVESLEE D  G +  RP   I +  N
Sbjct: 598 SCLKSLKKLDLSGCSELKNIPKNLGKVESLEEFD--GLSNPRPGFGIVVPGN 647



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  + L  CK++  LP  +  ++ L    L G  K  +FP++  + + L+ + L+ T I 
Sbjct: 509 LQYVNLVNCKSIRILPSNLE-MESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGIT 567

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  L G  L ++  CKNLKS+PS+I+ L+SL+ +  SGCS+LKN+ + LGKVESL
Sbjct: 568 KLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESL 627

Query: 803 E 803
           E
Sbjct: 628 E 628



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 28/209 (13%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           NL  L     S   L+ + LS    L + P +   + +L  L L+G TS++EV  S+   
Sbjct: 448 NLDQLWYGCKSALNLKIINLSYSLNLSRTPDLTG-IPNLESLILEGCTSLSEVHPSLGSH 506

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L+ + L  CK++  LPS++  ++SLK   L GC KLE  PD +  +  L  L +  T 
Sbjct: 507 KNLQYVNLVNCKSIRILPSNLE-MESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETG 565

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCS 217
           I + +SSI                       HL +   LL  +SC     +P S++ + S
Sbjct: 566 ITKLSSSIR----------------------HL-IGLGLLSMNSCKNLKSIPSSISCLKS 602

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
           L KLDLS C      IP ++  + SL+E 
Sbjct: 603 LKKLDLSGCS-ELKNIPKNLGKVESLEEF 630



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 7/76 (9%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           ++FPD+V+ ++       D T I +LS +I  L GL  L++N CKNL+ +P +IS LK L
Sbjct: 544 EKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSSISCLKSL 603

Query: 708 STLNLSGLSKFREFPE 723
             L+LSG S+ +  P+
Sbjct: 604 KKLDLSGCSELKNIPK 619



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 99/247 (40%), Gaps = 55/247 (22%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--- 180
           +LK +NLS    L   PD  G                        + NL SL   GC   
Sbjct: 461 NLKIINLSYSLNLSRTPDLTG------------------------IPNLESLILEGCTSL 496

Query: 181 NEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           +E   S   H +L + NL+   +C    +LPS   + SL    L  C L     P  + N
Sbjct: 497 SEVHPSLGSHKNLQYVNLV---NCKSIRILPSNLEMESLKVFTLDGC-LKLEKFPDVVRN 552

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           ++ L  L L+      L +SI  L+ L  L +  CK L+S+P               S +
Sbjct: 553 MNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIP---------------SSI 597

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           +   +LK    K  +  C   LK + KN   +  L E+     +S+P     IV PG++I
Sbjct: 598 SCLKSLK----KLDLSGC-SELKNIPKNLGKVESLEEF---DGLSNPRPGFGIVVPGNEI 649

Query: 360 PKWFMYQ 366
           P WF ++
Sbjct: 650 PGWFNHR 656



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 34/192 (17%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW     + D+   L D T   +    IE +F    L + G 
Sbjct: 333 GKEIVRCESPEEPGRRSRLW----TYEDVCLALMDNTGKEK----IEAIF----LDMPGI 380

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR--------------------DQL 731
           K+ +      S +  L  L ++ + +  E PE  S++                    D+L
Sbjct: 381 KDAQWNMEAFSKMSKLRLLKINNV-QLSEGPEDLSNKLRFLEWYSYPSKSLPAGLQVDEL 439

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +E+H+  + +  L    +      + NL    NL   P  + G+ +L  +   GC+ L  
Sbjct: 440 VELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTPD-LTGIPNLESLILEGCTSLSE 498

Query: 792 VTETLGKVESLE 803
           V  +LG  ++L+
Sbjct: 499 VHPSLGSHKNLQ 510


>gi|356515308|ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 180/415 (43%), Gaps = 68/415 (16%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L  L +++L+ C  L K P I   + +L++L+LD  T++ EV  S+  L  L  L    C
Sbjct: 627 LDSLTSMDLTHCELLTKLPDITG-VPNLTELHLDYCTNLEEVHDSVGFLEKLVELRAYGC 685

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
             L   PS++  L SL++L L+ C  L+N P  LGK+++L+ + +  T IR    SI  +
Sbjct: 686 TKLKVFPSALR-LASLRSLILNWCSSLQNFPAILGKMDNLKSVSIDSTGIRELPPSIGNL 744

Query: 170 KNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCP--------VALMLPSLTGVCSL 218
             L+ L  + C    E P +     +L  NL     CP        +  M  S     ++
Sbjct: 745 VGLQELSMTSCLSLKELPDNFDMLQNL-INL-DIEGCPQLRSFLTKLRDMGQSTLTFGNI 802

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
             L+L +CGL +  +P        +  L L++N+FV LP  I     LE L L++CK+LQ
Sbjct: 803 QSLNLENCGLIDEDLPIIFHCFPKVSSLVLSKNDFVALPICIQEFPCLELLHLDNCKKLQ 862

Query: 279 SLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYL 338
            +P  PPN+Q+V A  C+SL      L L  S+ T   C                     
Sbjct: 863 EIPGFPPNIQYVNARNCTSLTAESSNLLL--SQETFEEC--------------------- 899

Query: 339 ELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP 398
                     ++ ++ PG+++P+WF +  +G  +T       +   K     +C    V 
Sbjct: 900 ----------EMQVMVPGTRVPEWFDHITKGEYMT------FWVREKFPATILCFALAVE 943

Query: 399 KHSTGTYLFHSYPAHELECSMDGSGEGHYIY---FRGKFGHVVSDHLWLLFLPRH 450
                ++          +C +     G  +Y       F  +V+DH+WL  L  H
Sbjct: 944 SEMKESF----------DCEIRFYINGDEVYELEMPRNFSDMVTDHVWLYDLRTH 988



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 32/148 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M +L  + +D T I E+P SI  L GL+ L++  C +L  LP     L+ L  L++ 
Sbjct: 718 LGKMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLSLKELPDNFDMLQNLINLDIE 777

Query: 61  GCSKLKKF--------------------------------PQIVASMEDLSKLYLDGTSI 88
           GC +L+ F                                P I      +S L L     
Sbjct: 778 GCPQLRSFLTKLRDMGQSTLTFGNIQSLNLENCGLIDEDLPIIFHCFPKVSSLVLSKNDF 837

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLP 116
             +P  I+  P LELL+L+ CK L  +P
Sbjct: 838 VALPICIQEFPCLELLHLDNCKKLQEIP 865



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 656 EFPDIVQV-------LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           + PDI  V       L   T++ E+  ++  L  LV+L   GC  L+  P  +  L  L 
Sbjct: 643 KLPDITGVPNLTELHLDYCTNLEEVHDSVGFLEKLVELRAYGCTKLKVFPSALR-LASLR 701

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
           +L L+  S  + FP I    D L  + ++ T IR LP SI  L G    ++  C +LK L
Sbjct: 702 SLILNWCSSLQNFPAILGKMDNLKSVSIDSTGIRELPPSIGNLVGLQELSMTSCLSLKEL 761

Query: 769 PSTINGLRSLRMMYPSGCSKLKNV----------TETLGKVESL 802
           P   + L++L  +   GC +L++           T T G ++SL
Sbjct: 762 PDNFDMLQNLINLDIEGCPQLRSFLTKLRDMGQSTLTFGNIQSL 805



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 8/135 (5%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG-------LSKF 718
           D T IREL  +I  L GL +L++  C +L+ LP     L+ L  L++ G       L+K 
Sbjct: 730 DSTGIRELPPSIGNLVGLQELSMTSCLSLKELPDNFDMLQNLINLDIEGCPQLRSFLTKL 789

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN-LKSLPSTINGLRS 777
           R+  + T +   +  ++LE   +      I       +S+L   KN   +LP  I     
Sbjct: 790 RDMGQSTLTFGNIQSLNLENCGLIDEDLPIIFHCFPKVSSLVLSKNDFVALPICIQEFPC 849

Query: 778 LRMMYPSGCSKLKNV 792
           L +++   C KL+ +
Sbjct: 850 LELLHLDNCKKLQEI 864


>gi|297809509|ref|XP_002872638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318475|gb|EFH48897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 853

 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 5/181 (2%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++S  +L  + L+G  S+  +  S+  L  +  L LKGC  L S+P T+  L+ L  L L
Sbjct: 634 LSSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKGCSKLESIPSTVD-LESLEVLNL 692

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKL+ FP+I  ++++L   Y+ GT I EVPSSI+ L  LE L L   ++L  LP+SI
Sbjct: 693 SGCSKLENFPEISPNVKEL---YMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSI 749

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK L+TLNLSGC  LE  PD   +++ L  LD+S TA+R   SSI  +  L  L F  
Sbjct: 750 CKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPSSISYLTALEELRFVD 809

Query: 180 C 180
           C
Sbjct: 810 C 810



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 74/113 (65%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++ +LY+ GT I EVPSSI+ L  LE L L+  ++L +LP +I  LK L TL LSGC+ L
Sbjct: 707 NVKELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSICKLKHLETLNLSGCTSL 766

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           ++FP +   M+ L  L L  T++ E+PSSI  L  LE L   +CKNLVRLP +
Sbjct: 767 ERFPDLSRRMKCLRFLDLSRTAVRELPSSISYLTALEELRFVDCKNLVRLPDN 819



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 124/268 (46%), Gaps = 43/268 (16%)

Query: 50  SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNE 108
           SL  L+ ++LS   +L K P++ +S  +L  + L+G  S+  +  S+  L  +  L L  
Sbjct: 613 SLGNLKKMKLSYSYQLTKIPRL-SSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKG 671

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
           C  L  +PS+++ L+SL+ LNLSGC KLEN P+    V+   EL + GT I+   SSI  
Sbjct: 672 CSKLESIPSTVD-LESLEVLNLSGCSKLENFPEISPNVK---ELYMGGTMIQEVPSSI-- 725

Query: 169 MKNLRSLYFSGCNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LS 224
            KNL  L      +     S HL +LP                  T +C L  L+   LS
Sbjct: 726 -KNLVLL-----EKLDLENSRHLKNLP------------------TSICKLKHLETLNLS 761

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
            C   E   P     +  L+ L L+R     LP+SIS L  LEEL   DCK L  LP   
Sbjct: 762 GCTSLER-FPDLSRRMKCLRFLDLSRTAVRELPSSISYLTALEELRFVDCKNLVRLPDNA 820

Query: 285 PNLQF------VRANGCSSLVTLFGALK 306
             L+F      +     S L   FG LK
Sbjct: 821 WTLRFKVEFRQIDTEKFSRLWNRFGWLK 848



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 3/157 (1%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS+L    +  P++ ++   GT I+E+  +I+ L  L +L L   ++L+ LP +I  LK+
Sbjct: 695 CSKLENFPEISPNVKELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSICKLKH 754

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L TLNLSG +    FP+++     L  + L  TA+R LP+SI  L+        DCKNL 
Sbjct: 755 LETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPSSISYLTALEELRFVDCKNLV 814

Query: 767 SLPSTINGLR---SLRMMYPSGCSKLKNVTETLGKVE 800
            LP     LR     R +     S+L N    L KV+
Sbjct: 815 RLPDNAWTLRFKVEFRQIDTEKFSRLWNRFGWLKKVQ 851



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 73/118 (61%), Gaps = 4/118 (3%)

Query: 673 LSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLL 732
           +S ++  L  +V L L GC  LE +P T+  L+ L  LNLSG SK   FPEI+ +   + 
Sbjct: 654 ISQSVSYLKKIVFLNLKGCSKLESIPSTVD-LESLEVLNLSGCSKLENFPEISPN---VK 709

Query: 733 EIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           E+++ GT I+ +P+SI+ L      +L++ ++LK+LP++I  L+ L  +  SGC+ L+
Sbjct: 710 ELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSICKLKHLETLNLSGCTSLE 767



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 110/250 (44%), Gaps = 33/250 (13%)

Query: 69  PQIVASMEDLSKLYLDGTSIAE-----VPSSIELLPG-LELLYLNECKNLVRLPSSINGL 122
           P +   M +L  L L  + + E      P  +E LP  L LL+  E   L  LP S N  
Sbjct: 530 PNVFEKMCNLRLLKLYCSKVEEKHGVYFPQGLEYLPSKLRLLHW-EFYPLSSLPESFNP- 587

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEEL-------DVSGTAIRRPTSSIFLMKNLRSL 175
           ++L  LNLS  C  +       +  SL  L           T I R +S+     NL  +
Sbjct: 588 ENLVELNLSSSCARKLWKGKKARFLSLGNLKKMKLSYSYQLTKIPRLSSA----PNLEHI 643

Query: 176 YFSGCNE---PPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA 231
              GCN       S S+   + F NL G   C     +PS   + SL  L+LS C   E 
Sbjct: 644 DLEGCNSLLSISQSVSYLKKIVFLNLKG---CSKLESIPSTVDLESLEVLNLSGCSKLEN 700

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP---PNLQ 288
             P    N+   KELY+       +P+SI  L+ LE+L+LE+ + L++LP       +L+
Sbjct: 701 -FPEISPNV---KELYMGGTMIQEVPSSIKNLVLLEKLDLENSRHLKNLPTSICKLKHLE 756

Query: 289 FVRANGCSSL 298
            +  +GC+SL
Sbjct: 757 TLNLSGCTSL 766


>gi|297791243|ref|XP_002863506.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309341|gb|EFH39765.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1168

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 177/400 (44%), Gaps = 95/400 (23%)

Query: 10   LYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGCSKLKK 67
            L L+G TS+ E+P +++ +  L  L L+GC +L SLP +T+ SLK   TL LS CS+ + 
Sbjct: 690  LNLEGCTSLKELPEAMQKMKNLVFLNLRGCTSLLSLPKITMDSLK---TLILSDCSQFQT 746

Query: 68   FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            F  I    E L  LYL+GT+I                          LPS+I  L  L  
Sbjct: 747  FEVI---SEHLETLYLNGTAIN------------------------GLPSAIGNLDRLIL 779

Query: 128  LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
            LNL  C  L  +PD LGK++SL+EL +S  +  +P                         
Sbjct: 780  LNLIDCKNLVTLPDCLGKLKSLQELKLSRCSKLKP------------------------- 814

Query: 188  SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI-DNLHSLKEL 246
                                  P +T      ++ L D G   A +P  I D     +  
Sbjct: 815  ---------------------FPDVTAKMESLRVLLLD-GTSIAEMPGSIYDLSLLRRLC 852

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
                ++  TL   +  + +L+ LEL+ CK L SLP +PPNLQ + A+GC+SL T+     
Sbjct: 853  LSRNDDIHTLRFDMGQMFHLKWLELKYCKNLISLPILPPNLQCLNAHGCTSLRTVASPQT 912

Query: 307  L------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK------LSIVF 354
            L        S +   NC + L+ + KN + IS +++  +L +             +   F
Sbjct: 913  LPTPTEQIHSTFIFTNCYE-LEQVSKNAI-ISYVQKKSKLMSADRYNQDFVFKSLIGTCF 970

Query: 355  PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
            PG  IP WF +Q  GS +T+  P + +N  +++G A+C V
Sbjct: 971  PGYDIPAWFNHQALGSVLTLKLPQH-WNAGRLIGIALCVV 1009



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 84/163 (51%), Gaps = 29/163 (17%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  LYL+GT+I  +PS+I  L  L LL L  CKNL +LP  +  LK L+ L+LS CSKLK
Sbjct: 754 LETLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLGKLKSLQELKLSRCSKLK 813

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIE------------------------LLPGLE 102
            FP + A ME L  L LDGTSIAE+P SI                          +  L+
Sbjct: 814 PFPDVTAKMESLRVLLLDGTSIAEMPGSIYDLSLLRRLCLSRNDDIHTLRFDMGQMFHLK 873

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV--PDTL 143
            L L  CKNL+ LP       +L+ LN  GC  L  V  P TL
Sbjct: 874 WLELKYCKNLISLPILP---PNLQCLNAHGCTSLRTVASPQTL 913



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 91/152 (59%), Gaps = 6/152 (3%)

Query: 656 EFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           E P+++++  +G T ++EL  A++ +  LV L L GC +L  LP+    +  L TL LS 
Sbjct: 683 EAPNLLRLNLEGCTSLKELPEAMQKMKNLVFLNLRGCTSLLSLPKI--TMDSLKTLILSD 740

Query: 715 LSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING 774
            S+F+ F  I+   + L  ++L GTAI GLP++I  L   IL NL DCKNL +LP  +  
Sbjct: 741 CSQFQTFEVIS---EHLETLYLNGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLGK 797

Query: 775 LRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           L+SL+ +  S CSKLK   +   K+ESL V L
Sbjct: 798 LKSLQELKLSRCSKLKPFPDVTAKMESLRVLL 829



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 67/152 (44%), Gaps = 27/152 (17%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +GT I  L  AI  L  L+ L L  CKNL  LP  +  LK L  L LS  SK + FP++T
Sbjct: 760 NGTAINGLPSAIGNLDRLILLNLIDCKNLVTLPDCLGKLKSLQELKLSRCSKLKPFPDVT 819

Query: 726 SSRDQLLEIHLEGTAIRGLPASI--------------------ELLSGNILS----NLKD 761
           +  + L  + L+GT+I  +P SI                        G +       LK 
Sbjct: 820 AKMESLRVLLLDGTSIAEMPGSIYDLSLLRRLCLSRNDDIHTLRFDMGQMFHLKWLELKY 879

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           CKNL SLP     L+ L      GC+ L+ V 
Sbjct: 880 CKNLISLPILPPNLQCLNA---HGCTSLRTVA 908



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 27/89 (30%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIE------------------------LLTGLELLTLKG 37
           A M+ L  L LDGTSI E+P SI                          +  L+ L LK 
Sbjct: 820 AKMESLRVLLLDGTSIAEMPGSIYDLSLLRRLCLSRNDDIHTLRFDMGQMFHLKWLELKY 879

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           CKNL SLP+   +L+CL      GC+ L+
Sbjct: 880 CKNLISLPILPPNLQCLNA---HGCTSLR 905


>gi|296089445|emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 182/396 (45%), Gaps = 88/396 (22%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M+ L  L L  T I  +PSSI  L GL+ L L  CK LSSLP +I SL  L+TL L  CS
Sbjct: 603 MRSLRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACS 662

Query: 64  KLKKFPQI-VASMEDLSKLYLDGT---SIAEVPSSIEL---------------------- 97
           +L  FP I + S++ L   YLD +   ++  +P+SI                        
Sbjct: 663 RLVGFPGINIGSLKALK--YLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDIN 720

Query: 98  ---LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE------S 148
              L  LE L  + C+NL  LP SI  + SLKTL ++ C KLE + +    V+      S
Sbjct: 721 FGSLKALESLDFSGCRNLESLPVSIYNVSSLKTLGITNCPKLEEMLEMKLGVDPCPWPFS 780

Query: 149 LEELDVSGTAI------------------RRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
                +S +AI                  + P SS+  + ++R  Y    + P  S+  H
Sbjct: 781 PLTCHISNSAIIWDDHWHDCFSSLEALDSQCPLSSLVEL-SVRKFYDMEEDIPIGSS--H 837

Query: 191 L-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH-------- 241
           L  L    LG     V  +L  +  + SL KL L+ C   E  IP DI NL         
Sbjct: 838 LTSLEILSLGNVPTVVEGILYDIFHLSSLVKLSLTKCKPTEEGIPRDIQNLSPLQQLSLH 897

Query: 242 -----------------SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
                            SL+ELYL  N+F ++PA IS L NL+ L+L  CK+LQ +P++P
Sbjct: 898 DCNLMKGTILDHICHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPELP 957

Query: 285 PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDS 320
            +L+F+ A+ C   ++   +  L    ++++NC  S
Sbjct: 958 SSLRFLDAH-CPDRIS---SSPLLLPIHSMVNCFKS 989



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 81/135 (60%), Gaps = 1/135 (0%)

Query: 22  SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKL 81
           SSI  +  LE LTLKGC  L SLP     L+CL+TL   GCS L+ FP+I   M  L KL
Sbjct: 550 SSISSMPNLETLTLKGCTRLKSLPRNFPKLECLQTLSCCGCSNLESFPKIEEEMRSLRKL 609

Query: 82  YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            L  T I  +PSSI  L GL+ L L+ CK L  LP SI  L SL+TLNL  C +L   P 
Sbjct: 610 NLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFPG 669

Query: 142 -TLGKVESLEELDVS 155
             +G +++L+ LD+S
Sbjct: 670 INIGSLKALKYLDLS 684



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 1/128 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  LTL GC  L+ LPR    L+ L TL+  G S    FP+I      L +++L  T I 
Sbjct: 558 LETLTLKGCTRLKSLPRNFPKLECLQTLSCCGCSNLESFPKIEEEMRSLRKLNLSQTGIM 617

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE-TLGKVES 801
           GLP+SI  L+G    +L  CK L SLP +I  L SL+ +    CS+L       +G +++
Sbjct: 618 GLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFPGINIGSLKA 677

Query: 802 LEVRLSSW 809
           L+    SW
Sbjct: 678 LKYLDLSW 685



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 107/210 (50%), Gaps = 7/210 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++SM +L  L L G T +  +P +   L  L+ L+  GC NL S P     ++ LR L L
Sbjct: 552 ISSMPNLETLTLKGCTRLKSLPRNFPKLECLQTLSCCGCSNLESFPKIEEEMRSLRKLNL 611

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPS- 117
           S  + +   P  ++ +  L +L L     ++ +P SI  L  L+ L L  C  LV  P  
Sbjct: 612 SQ-TGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFPGI 670

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSL 175
           +I  LK+LK L+LS C  LE++P+++G + SL+ L + G +  +  P  +   +K L SL
Sbjct: 671 NIGSLKALKYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDINFGSLKALESL 730

Query: 176 YFSGC-NEPPASASWHLHLPFNLLGKSSCP 204
            FSGC N      S +       LG ++CP
Sbjct: 731 DFSGCRNLESLPVSIYNVSSLKTLGITNCP 760



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 32/239 (13%)

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN-ECKNLVRLPSSINGLKSLKTL 128
           ++  +M  L  L ++   I ++    EL P  +L+Y + +   L  LPS+ +   +L  L
Sbjct: 458 EVFRNMNQLRLLKVEFNQIVQLSQDFEL-PCHDLVYFHWDYYPLEYLPSNFHT-DNLVEL 515

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
           NL  C +++++ +     + L+ +D+S +      SSI  M NL +L   GC    +   
Sbjct: 516 NL-WCSRIKHLWEGNMPAKKLKVIDLSYSMHLVDISSISSMPNLETLTLKGCTRLKS--- 571

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLHSLKELY 247
               LP N             P L   C  T   LS CG     + P   + + SL++L 
Sbjct: 572 ----LPRNF------------PKLE--CLQT---LSCCGCSNLESFPKIEEEMRSLRKLN 610

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP---PNLQFVRANGCSSLVTLFG 303
           L++   + LP+SIS L  L+EL+L  CK+L SLP       +LQ +    CS LV   G
Sbjct: 611 LSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFPG 669



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 66/137 (48%), Gaps = 23/137 (16%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T I  L  +I  L GL +L L+ CK L  LP +I +L  L TLNL   S+   FP     
Sbjct: 614 TGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFP----- 668

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                     G  I  L A   L       +L  C+NL+SLP++I  L SL+ +   GCS
Sbjct: 669 ----------GINIGSLKALKYL-------DLSWCENLESLPNSIGSLSSLQTLLLIGCS 711

Query: 788 KLKNVTE-TLGKVESLE 803
           KLK   +   G +++LE
Sbjct: 712 KLKGFPDINFGSLKALE 728


>gi|326492041|dbj|BAJ98245.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1285

 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 157/324 (48%), Gaps = 35/324 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G+ I E+P S+  L  L  L +     ++SLP  IS+L  L+TL LS C  L   P
Sbjct: 570 LDLRGSQIMELPKSVGRLKHLRYLDVSS-SPITSLPNCISNLLNLQTLHLSNCGNLYVLP 628

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           + + S+E+L  L L       +P SI  L  L+ L ++ C  L  LPSSI  L+SL+ LN
Sbjct: 629 RAICSLENLETLNLSCCHFQTLPDSIGYLQNLQNLNMSFCSFLCTLPSSIGDLQSLQYLN 688

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRP-------------------------TS 164
             GC  LE +PDT+ ++++L  L++S   I R                            
Sbjct: 689 FKGCVNLETLPDTMCRLQNLHFLNLSRCGILRALPKNIGNLSNLLHLNLSQCSDLEAIPD 748

Query: 165 SIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL 221
           SI  +  L +L  S C+   E P S    L L   +L   +  +AL + + + + +L  L
Sbjct: 749 SIGCITRLHTLDMSHCSNLLELPRSIGGLLELQTLILSHHARSLALPIAT-SHLPNLQTL 807

Query: 222 DLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSL 280
           DLS   +G   +P  I NLH+LKEL L +  N   LP SI+ L+ LE L L  C  L +L
Sbjct: 808 DLS-WNIGLEELPESIGNLHNLKELLLFQCWNLRKLPESITNLMMLERLSLVGCAHLATL 866

Query: 281 PQ---IPPNLQFVRANGCSSLVTL 301
           P       NL+ ++ + C SL  L
Sbjct: 867 PDGLTTITNLKHLKNDQCPSLERL 890



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 2/129 (1%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           I  L   I  L  L  L L+ C NL  LPR I +L+ L TLNLS    F+  P+      
Sbjct: 600 ITSLPNCISNLLNLQTLHLSNCGNLYVLPRAICSLENLETLNLS-CCHFQTLPDSIGYLQ 658

Query: 730 QLLEIHLEGTAIR-GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L  +++   +    LP+SI  L      N K C NL++LP T+  L++L  +  S C  
Sbjct: 659 NLQNLNMSFCSFLCTLPSSIGDLQSLQYLNFKGCVNLETLPDTMCRLQNLHFLNLSRCGI 718

Query: 789 LKNVTETLG 797
           L+ + + +G
Sbjct: 719 LRALPKNIG 727



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 11/142 (7%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           +D+  +  +I  +  L  L ++ C NL  LPR+I  L  L TL LS  ++    P  TS 
Sbjct: 741 SDLEAIPDSIGCITRLHTLDMSHCSNLLELPRSIGGLLELQTLILSHHARSLALPIATSH 800

Query: 728 RDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMM 781
              L  + L     +  LP SI    GN L NLK+     C NL+ LP +I  L  L  +
Sbjct: 801 LPNLQTLDLSWNIGLEELPESI----GN-LHNLKELLLFQCWNLRKLPESITNLMMLERL 855

Query: 782 YPSGCSKLKNVTETLGKVESLE 803
              GC+ L  + + L  + +L+
Sbjct: 856 SLVGCAHLATLPDGLTTITNLK 877



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 1/136 (0%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+ I EL  ++  L  L  L ++    +  LP  IS L  L TL+LS        P    
Sbjct: 574 GSQIMELPKSVGRLKHLRYLDVSS-SPITSLPNCISNLLNLQTLHLSNCGNLYVLPRAIC 632

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           S + L  ++L     + LP SI  L      N+  C  L +LPS+I  L+SL+ +   GC
Sbjct: 633 SLENLETLNLSCCHFQTLPDSIGYLQNLQNLNMSFCSFLCTLPSSIGDLQSLQYLNFKGC 692

Query: 787 SKLKNVTETLGKVESL 802
             L+ + +T+ ++++L
Sbjct: 693 VNLETLPDTMCRLQNL 708



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 7/135 (5%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEIHLEG 738
           L  L  L   GC NLE LP T+  L+ L  LNLS     R  P+ I +  + L     + 
Sbjct: 681 LQSLQYLNFKGCVNLETLPDTMCRLQNLHFLNLSRCGILRALPKNIGNLSNLLHLNLSQC 740

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK---LKNVTET 795
           + +  +P SI  ++     ++  C NL  LP +I GL  L+ +  S  ++   L   T  
Sbjct: 741 SDLEAIPDSIGCITRLHTLDMSHCSNLLELPRSIGGLLELQTLILSHHARSLALPIATSH 800

Query: 796 LGKVESLEVRLSSWN 810
           L  +++L++   SWN
Sbjct: 801 LPNLQTLDL---SWN 812



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 31/131 (23%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLS-----------KLYLDGTSIAEVPSSIELL---- 98
            L+T+ +SGC K++  P +  ++ DLS           +++  G S ++  S +  L    
Sbjct: 1103 LKTVTVSGCPKMRPKPCLPDAISDLSLSNSSEMLSVGRMF--GPSSSKSASLLRRLWVRK 1160

Query: 99   --------------PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLG 144
                          P LE L +  C+ L  LP +I  L  ++ L +  C  LE +P+ LG
Sbjct: 1161 CHASSCDWNLLQHRPKLEDLTIEYCERLRVLPEAIRHLSMVRKLKIDNCTDLEVLPEWLG 1220

Query: 145  KVESLEELDVS 155
             + +LE L++S
Sbjct: 1221 DLVALEYLEIS 1231



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            +EDL+  Y +   +  +P +I  L  +  L ++ C +L  LP  +  L +L+ L +S C 
Sbjct: 1177 LEDLTIEYCERLRV--LPEAIRHLSMVRKLKIDNCTDLEVLPEWLGDLVALEYLEISCCQ 1234

Query: 135  KLENVPDTLGKVESLEELDVS--GTAI 159
            KL ++P+ L  + +LEEL VS  GT++
Sbjct: 1235 KLVSLPEGLRSLTALEELIVSDCGTSL 1261


>gi|357454621|ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1169

 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 226/515 (43%), Gaps = 121/515 (23%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+  V  SI  L  L  L L  CK L+SL  + + L+ LR L LSGCS+L+ F     +M
Sbjct: 676  SLLNVHPSILRLNKLVRLNLFYCKALTSLR-SDTHLRSLRDLFLSGCSRLEDFSVTSDNM 734

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            +DL+   L  T+I E                        LPSSI  LK+L+TL L  C  
Sbjct: 735  KDLA---LSSTAINE------------------------LPSSIGSLKNLETLTLDFCKS 767

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            L  +P+                        +  +++LR+LY  GC +  AS   +LH+  
Sbjct: 768  LNKLPN-----------------------EVIDLRSLRALYVHGCTQLDAS---NLHIL- 800

Query: 196  NLLGKSSCPVALMLPSLTGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                            L+G+ SL  L L +C  L E  IP +I  L SL+EL L   +  
Sbjct: 801  ----------------LSGLASLETLKLEECRNLSE--IPDNISLLSSLRELLLKETDIE 842

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG--------ALK 306
              PASI  L  LE+L+++ C+RLQ++P++PP+L+ + A  CSSL T+           L+
Sbjct: 843  RFPASIKHLSKLEKLDVKGCRRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQ 902

Query: 307  LCRSKYTIINCIDSLKL-LRKNGLAISMLREYLELQAVSDPGHK-----LSIVFPGSQIP 360
              +      NC++  +L LR   +   +  + L    +S  G K     + +++PGS++P
Sbjct: 903  AYKLHTQFQNCVNLDELSLRAIEVNAQVNMKKLAYNHLSTLGSKFLDGPVDVIYPGSKVP 962

Query: 361  KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-QVP---KHSTG--TYLFHSYPAHE 414
            +W MY+   +S+TV   S     +K VGF  C V  Q+P   K+  G   YL        
Sbjct: 963  EWLMYRTTEASVTVDFSS--APKSKFVGFIFCVVAGQLPSDDKNFIGCDCYLETGNGEKV 1020

Query: 415  LECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF---------LPRHGHNWQFESNLI---R 462
               SMD     H   F        SDH+++ +          P   +  +  ++ I    
Sbjct: 1021 SLGSMDTWTSIHSSEF-------FSDHIFMWYDELCCLQNSKPEKENMDELMASYIPKVS 1073

Query: 463  LSFRSISDPTWK------VKRCGFHPIYMHEVEEF 491
              F + S  TWK      ++ CG  PIY  E  +F
Sbjct: 1074 FEFFAQSGNTWKKRENNMIRGCGVCPIYDTEYFDF 1108



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 4/153 (2%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++ DL L  T+I E+PSSI  L  LE LTL  CK+L+ LP  +  L+ LR L + GC++L
Sbjct: 733 NMKDLALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQL 792

Query: 66  K--KFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
                  +++ +  L  L L+   +++E+P +I LL  L  L L E  ++ R P+SI  L
Sbjct: 793 DASNLHILLSGLASLETLKLEECRNLSEIPDNISLLSSLRELLLKET-DIERFPASIKHL 851

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
             L+ L++ GC +L+N+P+    ++ L   D S
Sbjct: 852 SKLEKLDVKGCRRLQNMPELPPSLKELYATDCS 884



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 6/123 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L L  CK L  L R+ + L+ L  L LSG S+  +F  +TS  D + ++ L  TAI 
Sbjct: 690 LVRLNLFYCKALTSL-RSDTHLRSLRDLFLSGCSRLEDFS-VTS--DNMKDLALSSTAIN 745

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK--NVTETLGKVE 800
            LP+SI  L       L  CK+L  LP+ +  LRSLR +Y  GC++L   N+   L  + 
Sbjct: 746 ELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSGLA 805

Query: 801 SLE 803
           SLE
Sbjct: 806 SLE 808



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 29/172 (16%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI----- 701
           CSRL + +    ++  +    T I EL  +I  L  L  LTL+ CK+L +LP  +     
Sbjct: 721 CSRLEDFSVTSDNMKDLALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRS 780

Query: 702 ---------------------SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                                S L  L TL L       E P+  S    L E+ L+ T 
Sbjct: 781 LRALYVHGCTQLDASNLHILLSGLASLETLKLEECRNLSEIPDNISLLSSLRELLLKETD 840

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           I   PASI+ LS     ++K C+ L+++P       SL+ +Y + CS L+ V
Sbjct: 841 IERFPASIKHLSKLEKLDVKGCRRLQNMPELPP---SLKELYATDCSSLETV 889



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L   + +E+L   I  +++L  ++LS      + P+ + + + L EI L G  ++
Sbjct: 620 LVELKLTWSR-VEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSKASN-LEEIELFGCKSL 677

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  SI  L+  +  NL  CK L SL S  + LRSLR ++ SGCS+L++ + T   ++ 
Sbjct: 678 LNVHPSILRLNKLVRLNLFYCKALTSLRSDTH-LRSLRDLFLSGCSRLEDFSVTSDNMKD 736

Query: 802 LEVRLSSWN 810
           L +  ++ N
Sbjct: 737 LALSSTAIN 745


>gi|110741833|dbj|BAE98859.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 660

 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 203/464 (43%), Gaps = 105/464 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 37  IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 96

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 97  TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 156

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 157 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 216

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 217 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 275

Query: 171 NLRSLYFSG--CNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY      +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 276 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 335

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 336 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 394

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA--I 331
           C+ L+ LP +P  L+ +    C SL ++    +L  +  T +N  +  K++   GL    
Sbjct: 395 CRELKRLPPLPCKLEQLNLANCFSLESVSDLSEL--TILTDLNLTNCAKVVDIPGLEHLT 452

Query: 332 SMLREYLE----------LQAVSDPGHKL--SIVFPGSQIPKWF 363
           ++ R Y+            + +S    K+  ++  PG+++P WF
Sbjct: 453 ALKRLYMTGCNSNYSLAVKKRLSKASLKMMRNLSLPGNRVPDWF 496



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 134/277 (48%), Gaps = 42/277 (15%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
           C  LS   V +S LK L  L LSGCS L   P+ + +M  L +L LDGT+I  +P SI  
Sbjct: 3   CSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINR 62

Query: 98  LPGLELLYLNECK----------------------NLVRLPSSINGLKSLKTLNLSGCCK 135
           L  LE+L L  CK                       L  LPSSI  LK+L+ L+L  C  
Sbjct: 63  LQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTS 122

Query: 136 LENVPDTLGKVESLEELDVSGTAIR----RPTSSIFLMKNLRSLY-FSGCN-----EPPA 185
           L  +PD++ +++SL++L ++G+A+     +P+S       L SLY FS  +     + P+
Sbjct: 123 LSKIPDSINELKSLKKLFINGSAVEELPLKPSS-------LPSLYDFSAGDCKFLKQVPS 175

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
           S           L  SS P+  +   +  +  + +L+L +C   +  +P  I ++ +L  
Sbjct: 176 SIGRLNS--LLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLK-FLPKSIGDMDTLYS 232

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 233 LNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 269



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
           C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+ LP SI  
Sbjct: 3   CSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINR 62

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE----VRL 806
           L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L+    VR 
Sbjct: 63  LQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRC 120

Query: 807 SSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +S ++ P   N+   +++     SAVE +
Sbjct: 121 TSLSKIPDSINELKSLKKLFINGSAVEEL 149



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 124 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 183

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 184 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 243

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 244 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 302

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 303 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 349



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 4/122 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI-HLEGTAI 741
           L +L L+GC +L  LP  I A+  L  L L G +  +  PE + +R Q LEI  L G  I
Sbjct: 19  LEKLFLSGCSDLSVLPENIGAMTSLKELLLDG-TAIKNLPE-SINRLQNLEILSLRGCKI 76

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP  I  L       L D   LK+LPS+I  L++L+ ++   C+ L  + +++ +++S
Sbjct: 77  QELPLCIGTLKSLEKLYLDDTA-LKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKS 135

Query: 802 LE 803
           L+
Sbjct: 136 LK 137



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------- 692
           + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK             
Sbjct: 29  DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKS 88

Query: 693 ---------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
                     L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+  
Sbjct: 89  LEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEE 148

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTI 772
           LP     L      +  DCK LK +PS+I
Sbjct: 149 LPLKPSSLPSLYDFSAGDCKFLKQVPSSI 177



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 95  DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 153

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 154 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 213

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 214 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 260


>gi|297850934|ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339190|gb|EFH69607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1488

 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 195/427 (45%), Gaps = 70/427 (16%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTIS----------- 49
            +  +  L DLYLD T++  +P SI  L  L+ L L  C +LS +P +I+           
Sbjct: 908  IGKLTSLEDLYLDDTALRNLPISIGDLKNLQKLHLMRCTSLSKIPDSINKLISLKELFIN 967

Query: 50   ------------SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                        SL CL+ L    C  LK+ P  +  +  L +L L+GT I  +P  I  
Sbjct: 968  GSAVEELPLDTGSLLCLKDLSAGDCKFLKQVPSSIGGLNSLLQLQLNGTPIEALPKEIGA 1027

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG- 156
            L  +  L L  CK L RLP+SI  + +L +LNL G   +E +P+  GK+E+L EL +S  
Sbjct: 1028 LHFIRKLELINCKFLKRLPNSIGDMDTLYSLNLVGS-NIEELPEDFGKLENLVELRMSNC 1086

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCN--------------------EPPASASWHLHLPFN 196
              ++R   S   +K+L  LY    +                    + P   S     P  
Sbjct: 1087 KMLKRLPKSFGDLKSLHRLYMQETSVAELPDNFGNLSNLMVLKMLKKPLRRSSESEAP-- 1144

Query: 197  LLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
              G S  P  + LP S + + SL +LD     +    +  D++ L SL  L L  N F +
Sbjct: 1145 --GTSEEPRFVELPHSFSNLLSLEELDARSWRIS-GKMRDDLEKLSSLMILNLGNNYFHS 1201

Query: 256  LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL-CRSKYTI 314
            LP+S+ GL NL+EL L DC+ L+ LP +P  L+ +    C SL ++F   KL    +  +
Sbjct: 1202 LPSSLVGLSNLKELLLCDCRELKGLPPLPWKLEQLNLENCFSLDSIFDLSKLKILHELNL 1261

Query: 315  INCID-----------SLKLLRKNGL--AISMLRE---YLELQAVSDPGHKL--SIVFPG 356
             NC+            +LK L  +G   + S  RE   +   + +S    K+  ++  PG
Sbjct: 1262 TNCVKVVDIPGLEHLTALKKLYMSGCNSSCSFPREDFIHNVKKRLSKASLKMLRNLSLPG 1321

Query: 357  SQIPKWF 363
            +++P WF
Sbjct: 1322 NRVPDWF 1328



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 145/292 (49%), Gaps = 29/292 (9%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            + +V  S+  L  L  L L+ C +LS   V +S LKCL  L L+GCS L   P+ + SM 
Sbjct: 806  LVKVHRSVGNLGKLLQLDLRRCSSLSEFLVDVSGLKCLEKLFLTGCSNLSVLPENIGSMP 865

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS------------------- 117
             L +L LDGT+I+ +P SI  L  LE L L  C+++  LPS                   
Sbjct: 866  LLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCIGKLTSLEDLYLDDTALR 925

Query: 118  ----SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR---PTSSIFLMK 170
                SI  LK+L+ L+L  C  L  +PD++ K+ SL+EL ++G+A+      T S+  +K
Sbjct: 926  NLPISIGDLKNLQKLHLMRCTSLSKIPDSINKLISLKELFINGSAVEELPLDTGSLLCLK 985

Query: 171  NLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
            +L +       + P+S      L    L  +  P+  +   +  +  + KL+L +C   +
Sbjct: 986  DLSAGDCKFLKQVPSSIGGLNSL--LQLQLNGTPIEALPKEIGALHFIRKLELINCKFLK 1043

Query: 231  AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
              +P+ I ++ +L  L L  +N   LP     L NL EL + +CK L+ LP+
Sbjct: 1044 -RLPNSIGDMDTLYSLNLVGSNIEELPEDFGKLENLVELRMSNCKMLKRLPK 1094



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L  C +L      +S LK L  L L+G S     PE   S   L E+ L+GTAI 
Sbjct: 819 LLQLDLRRCSSLSEFLVDVSGLKCLEKLFLTGCSNLSVLPENIGSMPLLKELLLDGTAIS 878

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +L  C++++ LPS I  L SL  +Y    + L+N+  ++G +++L
Sbjct: 879 NLPDSIFRLQKLEKLSLMGCRSIQELPSCIGKLTSLEDLYLDDTA-LRNLPISIGDLKNL 937

Query: 803 E 803
           +
Sbjct: 938 Q 938



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 24/142 (16%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S L E     P + ++L DGT I  L  +I  L  L +L+L GC++++ LP  I  L 
Sbjct: 853 NLSVLPENIGSMPLLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPSCIGKLT 912

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L                         +++L+ TA+R LP SI  L      +L  C +L
Sbjct: 913 SLE------------------------DLYLDDTALRNLPISIGDLKNLQKLHLMRCTSL 948

Query: 766 KSLPSTINGLRSLRMMYPSGCS 787
             +P +IN L SL+ ++ +G +
Sbjct: 949 SKIPDSINKLISLKELFINGSA 970



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 46/201 (22%)

Query: 593  HLMCC---------INSMVSQAKAISQQGQFVKMISVDSGCMSCYKKW--GRQTVRRQSP 641
            HLM C         IN ++S  K +   G  V+ + +D+G + C K    G     +Q P
Sbjct: 941  HLMRCTSLSKIPDSINKLIS-LKELFINGSAVEELPLDTGSLLCLKDLSAGDCKFLKQVP 999

Query: 642  QEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
               G  +           ++Q+  +GT I  L   I  L  + +L L  CK L+RLP +I
Sbjct: 1000 SSIGGLNS----------LLQLQLNGTPIEALPKEIGALHFIRKLELINCKFLKRLPNSI 1049

Query: 702  SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
              +  L +LNL G S   E PE     + L+E+ +                        +
Sbjct: 1050 GDMDTLYSLNLVG-SNIEELPEDFGKLENLVELRM-----------------------SN 1085

Query: 762  CKNLKSLPSTINGLRSLRMMY 782
            CK LK LP +   L+SL  +Y
Sbjct: 1086 CKMLKRLPKSFGDLKSLHRLY 1106



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 42/197 (21%)

Query: 118 SINGLKSLKTLNLSGCCKLENVPD-----------------------TLGKVESLEELDV 154
           S  G ++LK +NL GC  LE +PD                       ++G +  L +LD 
Sbjct: 765 SKKGDENLKVVNLRGCHSLEAIPDLSNHIALEKLVLERCNLLVKVHRSVGNLGKLLQLD- 823

Query: 155 SGTAIRRPTS-SIFL-----MKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCP 204
               +RR +S S FL     +K L  L+ +GC+     P    S  L     L G +   
Sbjct: 824 ----LRRCSSLSEFLVDVSGLKCLEKLFLTGCSNLSVLPENIGSMPLLKELLLDGTA--- 876

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
           ++ +  S+  +  L KL L  C      +PS I  L SL++LYL+      LP SI  L 
Sbjct: 877 ISNLPDSIFRLQKLEKLSLMGCR-SIQELPSCIGKLTSLEDLYLDDTALRNLPISIGDLK 935

Query: 265 NLEELELEDCKRLQSLP 281
           NL++L L  C  L  +P
Sbjct: 936 NLQKLHLMRCTSLSKIP 952



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 27/168 (16%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            D T +R L ++I  L  L +L L  C +L ++P +I+ L  L  L ++G S   E P  T
Sbjct: 920  DDTALRNLPISIGDLKNLQKLHLMRCTSLSKIPDSINKLISLKELFING-SAVEELPLDT 978

Query: 726  SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
             S   L ++                         L GT I  LP  I  L       L +
Sbjct: 979  GSLLCLKDLSAGDCKFLKQVPSSIGGLNSLLQLQLNGTPIEALPKEIGALHFIRKLELIN 1038

Query: 762  CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
            CK LK LP++I  + +L  +   G S ++ + E  GK+E+L E+R+S+
Sbjct: 1039 CKFLKRLPNSIGDMDTLYSLNLVG-SNIEELPEDFGKLENLVELRMSN 1085


>gi|9279731|dbj|BAB01321.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1285

 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 198/440 (45%), Gaps = 87/440 (19%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            M +  +L +L L   +S+ E+PSSI     L+ L L  C +L  LP  I +   L  L+L
Sbjct: 760  MGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDL 819

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              CS L + P  +  + +L +L L G +S+ E+PSS+  +  L++L L+ C NLV+LPSS
Sbjct: 820  RKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSS 879

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
                 +L  L+LSGC  L  +P ++G + +L+EL++   +            NL  L   
Sbjct: 880  FGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCS------------NLVKL--- 924

Query: 179  GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC------------ 226
                 P+S   +LHL F  L  + C     LPS   + SL +LDL+DC            
Sbjct: 925  -----PSSIG-NLHLLFT-LSLARCQKLEALPSNINLKSLERLDLTDCSQFKSFPEISTN 977

Query: 227  -------GLGEAAIPSDIDNLHSLKELYLNR--------------------NNFVTLPAS 259
                   G     +PS I +   L  L+++                      +   +   
Sbjct: 978  IECLYLDGTAVEEVPSSIKSWSRLTVLHMSYFEKLKEFSHVLDIITWLEFGEDIQEVAPW 1037

Query: 260  ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCID 319
            I  +  L  L L  C++L SLPQ+P +L  + A GC SL TL  +     +  +++N   
Sbjct: 1038 IKEISRLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETLDCSYN---NPLSLLNFAK 1094

Query: 320  SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ-NEGSSITVT--- 375
              KL ++        R+++     S+       V PG+++P +F ++   G+S+T+    
Sbjct: 1095 CFKLNQE-------ARDFIIQIPTSNDA-----VLPGAEVPAYFTHRATTGASLTIKLNE 1142

Query: 376  RPSYLYNVNKVVGFAICCVF 395
            RP     ++  + F  C V 
Sbjct: 1143 RP-----ISTSMRFKACIVL 1157



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 153/294 (52%), Gaps = 23/294 (7%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+ E+PSSI     L+ L L GC  L  LP++I     L+   L+GCS L + P  + +
Sbjct: 705 SSLVELPSSIGNAINLQNLDL-GCLRLLKLPLSIVKFTNLKKFILNGCSSLVELP-FMGN 762

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             +L  L L   +S+ E+PSSI     L+ L L+ C +LV+LPS I    +L+ L+L  C
Sbjct: 763 ATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKC 822

Query: 134 CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE--------PP 184
             L  +P ++G V +L  LD+SG +++    SS+  +  L+ L    C+           
Sbjct: 823 SSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGH 882

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
           A+  W L L       S C   + LPS  G + +L +L+L +C      +PS I NLH L
Sbjct: 883 ATNLWRLDL-------SGCSSLVELPSSIGNITNLQELNLCNCS-NLVKLPSSIGNLHLL 934

Query: 244 KELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
             L L R      LP++I+ L +LE L+L DC + +S P+I  N++ +  +G +
Sbjct: 935 FTLSLARCQKLEALPSNIN-LKSLERLDLTDCSQFKSFPEISTNIECLYLDGTA 987



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 136/296 (45%), Gaps = 52/296 (17%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+ E+P  +   T LE L LK C                 +L+L+ CS L + P  + + 
Sbjct: 676 SLKELPD-LSTATNLEELILKYC-----------------SLDLNECSSLVELPSSIGNA 717

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------L 112
            +L  L L    + ++P SI     L+   LN C +                       L
Sbjct: 718 INLQNLDLGCLRLLKLPLSIVKFTNLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSSL 777

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMK 170
           V LPSSI    +L+ L+LS C  L  +P  +G   +LE LD+    + +  PT SI  + 
Sbjct: 778 VELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPT-SIGHVT 836

Query: 171 NLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDC 226
           NL  L  SGC+   E P+S      L   +L   +C   + LPS  G   +L +LDLS C
Sbjct: 837 NLWRLDLSGCSSLVELPSSVGNISEL--QVLNLHNCSNLVKLPSSFGHATNLWRLDLSGC 894

Query: 227 GLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
                 +PS I N+ +L+EL L N +N V LP+SI  L  L  L L  C++L++LP
Sbjct: 895 S-SLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALP 949



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 27/226 (11%)

Query: 641  PQEPGNCSRLWE-EADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            P   G+ + LW  +      +V++ S   +I EL +          L L+ C NL +LP 
Sbjct: 829  PTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQV----------LNLHNCSNLVKLPS 878

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSN 758
            +      L  L+LSG S   E P    +   L E++L   + +  LP+SI  L      +
Sbjct: 879  SFGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLS 938

Query: 759  LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV----------RLSS 808
            L  C+ L++LPS IN L+SL  +  + CS+ K+  E    +E L +           + S
Sbjct: 939  LARCQKLEALPSNIN-LKSLERLDLTDCSQFKSFPEISTNIECLYLDGTAVEEVPSSIKS 997

Query: 809  WNRPKM--QNDFDCVEQ--SAVETVTKLAKAELLRDSDSWKKNVDK 850
            W+R  +   + F+ +++    ++ +T L   E +++   W K + +
Sbjct: 998  WSRLTVLHMSYFEKLKEFSHVLDIITWLEFGEDIQEVAPWIKEISR 1043



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + + + EL  +I     L  L L+ C +L +LP  I     L  L+L   S   E P 
Sbjct: 771 LGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPT 830

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                  L  + L G +++  LP+S+  +S   + NL +C NL  LPS+     +L  + 
Sbjct: 831 SIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLD 890

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCS L  +  ++G + +L+
Sbjct: 891 LSGCSSLVELPSSIGNITNLQ 911


>gi|297791267|ref|XP_002863518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309353|gb|EFH39777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1150

 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 227/519 (43%), Gaps = 118/519 (22%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  L L+G TS+  +   ++ +  L  L L+GC +L  LP    +L  L TL L+GC K
Sbjct: 656  NLLRLNLEGCTSLDCLSEEMKTMQSLVFLNLRGCTSLRCLPEM--NLSSLTTLILTGCLK 713

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L++F  I    E++  LYLDGT+I ++P+ +  L  L LL L EC+              
Sbjct: 714  LREFRLIS---ENIESLYLDGTAIKDLPTDMVKLQRLILLNLKECR-------------- 756

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLYFSGCNEP 183
                      +LE +P+ +GK+++L+EL +SG +  +   ++   M+N R L   G    
Sbjct: 757  ----------RLEIIPECIGKLKALQELILSGCSNLKSFPNLEDTMENFRVLLLDG---- 802

Query: 184  PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                                         T +  + K            I S  ++L  L
Sbjct: 803  -----------------------------TSIDEMPK------------IMSGSNSLSFL 821

Query: 244  KELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
            + L   RN+ ++ L + IS L +L+ L+L+ CK+L+SL  +PPN+Q + A+GC SL T+ 
Sbjct: 822  RRLSFRRNDVISSLGSDISQLYHLKWLDLKYCKKLKSLSTLPPNIQCLDAHGCISLQTVT 881

Query: 303  GALKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF-- 354
              L          S +   NC   L    KN +A  +LR   + + +SD  H  S VF  
Sbjct: 882  SPLAFLMPTEDTHSMFIFTNCC-KLNEAAKNDIASHILR---KCRLISDDHHNESFVFRA 937

Query: 355  ------PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
                  PG ++P WF +Q   S +    P +  + NK +G A+C +     +        
Sbjct: 938  LIGTCYPGYEVPPWFSHQAFSSVLEPKLPPHWCD-NKFLGLALCAIVSFHDYRDQNNRLL 996

Query: 409  SYPAHELECSMDGSGEGHYIYFRGKFG------HVVSDHLWLLFLP----RHGHNWQFES 458
                 E E ++D S     +   G F        V SDH+++ ++     +     Q++ 
Sbjct: 997  VKCTCEFE-NLDASCSQFSVPVGGWFEPGNEPRTVESDHVFIGYISWLNIKKRQEEQYKR 1055

Query: 459  NLI----RLSFRSISDPTW------KVKRCGFHPIYMHE 487
              +     L+F S++D T       KV +CGF  +Y  E
Sbjct: 1056 GCVPTKASLTF-SVTDGTGQVIAQCKVVKCGFGLVYEPE 1093



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 5/181 (2%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +++  LYLDGT+I ++P+ +  L  L LL LK C+ L  +P  I  LK L+ L LSGCS 
Sbjct: 722 ENIESLYLDGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPECIGKLKALQELILSGCSN 781

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVP---SSIELLPGLELLYLNECKNLVRLPSSING 121
           LK FP +  +ME+   L LDGTSI E+P   S    L  L  L       +  L S I+ 
Sbjct: 782 LKSFPNLEDTMENFRVLLLDGTSIDEMPKIMSGSNSLSFLRRLSFRRNDVISSLGSDISQ 841

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELD-VSGTAIRRPTSSIFLMKNLRSLY-FSG 179
           L  LK L+L  C KL+++      ++ L+    +S   +  P + +   ++  S++ F+ 
Sbjct: 842 LYHLKWLDLKYCKKLKSLSTLPPNIQCLDAHGCISLQTVTSPLAFLMPTEDTHSMFIFTN 901

Query: 180 C 180
           C
Sbjct: 902 C 902



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 92/165 (55%), Gaps = 9/165 (5%)

Query: 646 NCSRLWEEADEF---PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           N SR+ ++   F   P+++++  +G T +  LS  ++ +  LV L L GC +L  LP   
Sbjct: 640 NNSRMLQKISGFSKAPNLLRLNLEGCTSLDCLSEEMKTMQSLVFLNLRGCTSLRCLPEM- 698

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
             L  L+TL L+G  K REF  I+ + + L   +L+GTAI+ LP  +  L   IL NLK+
Sbjct: 699 -NLSSLTTLILTGCLKLREFRLISENIESL---YLDGTAIKDLPTDMVKLQRLILLNLKE 754

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           C+ L+ +P  I  L++L+ +  SGCS LK+       +E+  V L
Sbjct: 755 CRRLEIIPECIGKLKALQELILSGCSNLKSFPNLEDTMENFRVLL 799



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 9/145 (6%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT I++L   +  L  L+ L L  C+ LE +P  I  LK L  L LSG S  + FP + 
Sbjct: 730 DGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPECIGKLKALQELILSGCSNLKSFPNLE 789

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSG----NILSNLKDCKN--LKSLPSTINGLRSLR 779
            + +    + L+GT+I  +P   +++SG    + L  L   +N  + SL S I+ L  L+
Sbjct: 790 DTMENFRVLLLDGTSIDEMP---KIMSGSNSLSFLRRLSFRRNDVISSLGSDISQLYHLK 846

Query: 780 MMYPSGCSKLKNVTETLGKVESLEV 804
            +    C KLK+++     ++ L+ 
Sbjct: 847 WLDLKYCKKLKSLSTLPPNIQCLDA 871


>gi|147821213|emb|CAN66451.1| hypothetical protein VITISV_004611 [Vitis vinifera]
          Length = 616

 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 190/397 (47%), Gaps = 52/397 (13%)

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           LE L L  C +L  +  S+  L  LK L+L  C  L+++P  +  ++SLE  DVSG    
Sbjct: 206 LEQLVLEGCISLREVHPSLVVLNKLKFLSLKNCIMLKSLPSNIYNLKSLETFDVSGC--- 262

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK 220
              S    +K L+ LY +    P AS         +L+ +SS  +  MLP    +CSLTK
Sbjct: 263 ---SDCVNLKWLKELY-ADKGTPSAS---------HLMPRSSNSICFMLPPFPVLCSLTK 309

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
           L+L++C + + A   ++  L SLK L L+ N FVTLP+SI+ L  L+ L LE+CKRL++L
Sbjct: 310 LNLTNCFISDGANLGNLGFLSSLKSLNLSGNLFVTLPSSINQLSQLKWLGLENCKRLKTL 369

Query: 281 PQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL 340
            ++P +++ + A+ C+SL TL    K                 L+ + L   +     EL
Sbjct: 370 RELPSSIEEINAHNCTSLTTLSSGFK-----------------LKGDPLLPPLEPASPEL 412

Query: 341 QAVSDP---GHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV 397
           +  S P       S+V PG +IP W   Q+  S I +  P   +N N V+ FA   V+  
Sbjct: 413 ET-SIPELLKAAFSLVIPGRRIPDWIRNQDCSSKIELELPPSWFNSN-VLAFAFAVVYNF 470

Query: 398 P---KHSTGTYLFHSYPAHELECSM-DGSGEGHY-IYFRGKF-GHVVSDHLWLLFLPRHG 451
           P    H +  ++         +C+        HY +Y +    G + SDHLWLL +P   
Sbjct: 471 PLPLSHRSSGWV-------SADCNFYSHHSSWHYAVYPQTTLRGGLESDHLWLLCVPFPS 523

Query: 452 HNWQFESNLIRLSFRS-ISDPTWKVKRCGFHPIYMHE 487
                E   I+ SF   +      +K+CG   +Y +E
Sbjct: 524 SINFDEVIRIKASFDILLRIGVCAIKKCGIDLVYRNE 560



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 45/182 (24%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G  S+ EV  S+ +L  L+ L+LK C  L SLP  I +LK L T ++SGCS 
Sbjct: 205 NLEQLVLEGCISLREVHPSLVVLNKLKFLSLKNCIMLKSLPSNIYNLKSLETFDVSGCSD 264

Query: 65  LKKFPQIVASMEDLSKLYLD-GTSIAE--VPSSIE----LLPGLELL-----------YL 106
                    +++ L +LY D GT  A   +P S      +LP   +L           ++
Sbjct: 265 -------CVNLKWLKELYADKGTPSASHLMPRSSNSICFMLPPFPVLCSLTKLNLTNCFI 317

Query: 107 NECKNL-------------------VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           ++  NL                   V LPSSIN L  LK L L  C +L+ + +    +E
Sbjct: 318 SDGANLGNLGFLSSLKSLNLSGNLFVTLPSSINQLSQLKWLGLENCKRLKTLRELPSSIE 377

Query: 148 SL 149
            +
Sbjct: 378 EI 379



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 2/101 (1%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           ++++L   I  LK L  +NLS     RE P+  S    L ++ LEG  ++R +  S+ +L
Sbjct: 169 HVKQLWDGIKVLKKLKFMNLSHSRYLRETPDF-SGVINLEQLVLEGCISLREVHPSLVVL 227

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           +     +LK+C  LKSLPS I  L+SL     SGCS   N+
Sbjct: 228 NKLKFLSLKNCIMLKSLPSNIYNLKSLETFDVSGCSDCVNL 268


>gi|93117599|gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 1142

 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 226/518 (43%), Gaps = 84/518 (16%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
            L  L+ L LS    L K P + +S   L KL L+G +S+ EV  S+  L  L LL L  C
Sbjct: 650  LNKLKILNLSHSKHLIKTPNLHSS--SLEKLMLEGCSSLVEVHQSVGHLKSLILLNLKGC 707

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
              +  LP SI  + SLK+LN+SGC +LE +P+ +  ++SL EL        +  SSI  +
Sbjct: 708  WRIKILPESICDVNSLKSLNISGCSQLEKLPERMSDIKSLTELLADEIQNEQFLSSIGHL 767

Query: 170  KNLR--SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDC 226
            K+LR  SL  S  N+   S++         +  S   V   LP S     S+ +L L++ 
Sbjct: 768  KHLRKLSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFLPTSFIDWRSVKRLKLANY 827

Query: 227  GLGEAAIP-SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
            GL E+A        L SL+EL L+ N F++LP+ IS L  L+ L +++C  L S+ ++P 
Sbjct: 828  GLSESATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQHLRVQNCSNLVSISELPS 887

Query: 286  NLQFVRAN-----------------------GCSSLVTLFGALKLCRSKYTIIN--CIDS 320
            +L+ + A+                       GC +L+ + G   L    + I +  C D 
Sbjct: 888  SLEKLYADSCRSMKRVCLPIQSKTNPILSLEGCGNLIEIQGMEGLSNHGWVIFSSGCCD- 946

Query: 321  LKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYL 380
                    L+ +  + ++E  A+   G+   I F G  +P W  +  EGSS++   P   
Sbjct: 947  --------LSNNSKKSFVE--ALRSGGYGYQIHFDGGTMPSWLSFHGEGSSLSFHVPPVF 996

Query: 381  YNVNKVVGFAICCV------FQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKF 434
              +  V+ F++  V        +   S G  LF S              E      RG +
Sbjct: 997  QGL--VLWFSLENVSIMDGELIIKNKSNGIQLFKSL-------------ELASFVLRGGW 1041

Query: 435  GHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
               VS  +  + +  HG + + E     LS + +++    VK CG H I   E+  F+E 
Sbjct: 1042 IRYVS--ISEMEMEEHGGDGELE-----LSVK-LTNTYNAVKECGVHVIA--EMPSFEEL 1091

Query: 495  TKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSGSSQWK 532
                 R  S      +H F GS       S S   QWK
Sbjct: 1092 EIGRDRVISAP----YHSFYGS------ISSSTIEQWK 1119



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L +    L  L  LNLS      + P + SS   L ++ LEG +++  +  S+  L
Sbjct: 639 NIKELWKEKKILNKLKILNLSHSKHLIKTPNLHSS--SLEKLMLEGCSSLVEVHQSVGHL 696

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
              IL NLK C  +K LP +I  + SL+ +  SGCS+L+ + E +  ++SL
Sbjct: 697 KSLILLNLKGCWRIKILPESICDVNSLKSLNISGCSQLEKLPERMSDIKSL 747


>gi|87162712|gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 228/515 (44%), Gaps = 121/515 (23%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  V  SI  L  L  L L  CK L+SL  + + L+ LR L LSGCS+L+ F     +M
Sbjct: 513 SLLNVHPSILRLNKLVRLNLFYCKALTSLR-SDTHLRSLRDLFLSGCSRLEDFSVTSDNM 571

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           +DL+   L  T+I E                        LPSSI  LK+L+TL L  C  
Sbjct: 572 KDLA---LSSTAINE------------------------LPSSIGSLKNLETLTLDFCKS 604

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L  +P+        E +D               +++LR+LY  GC +  AS   +LH+  
Sbjct: 605 LNKLPN--------EVID---------------LRSLRALYVHGCTQLDAS---NLHIL- 637

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                           L+G+ SL  L L +C  L E  IP +I  L SL+EL L   +  
Sbjct: 638 ----------------LSGLASLETLKLEECRNLSE--IPDNISLLSSLRELLLKETDIE 679

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG--------ALK 306
             PASI  L  LE+L+++ C+RLQ++P++PP+L+ + A  CSSL T+           L+
Sbjct: 680 RFPASIKHLSKLEKLDVKGCRRLQNMPELPPSLKELYATDCSSLETVMFNWNASDLLQLQ 739

Query: 307 LCRSKYTIINCIDSLKL-LRKNGLAISMLREYLELQAVSDPGHK-----LSIVFPGSQIP 360
             +      NC++  +L LR   +   +  + L    +S  G K     + +++PGS++P
Sbjct: 740 AYKLHTQFQNCVNLDELSLRAIEVNAQVNMKKLAYNHLSTLGSKFLDGPVDVIYPGSKVP 799

Query: 361 KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF-QVP---KHSTG--TYLFHSYPAHE 414
           +W MY+   +S+TV   S     +K VGF  C V  Q+P   K+  G   YL        
Sbjct: 800 EWLMYRTTEASVTVDFSS--APKSKFVGFIFCVVAGQLPSDDKNFIGCDCYLETGNGEKV 857

Query: 415 LECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF---------LPRHGHNWQFESNLI---R 462
              SMD     H   F        SDH+++ +          P   +  +  ++ I    
Sbjct: 858 SLGSMDTWTSIHSSEF-------FSDHIFMWYDELCCLQNSKPEKENMDELMASYIPKVS 910

Query: 463 LSFRSISDPTWK------VKRCGFHPIYMHEVEEF 491
             F + S  TWK      ++ CG  PIY  E  +F
Sbjct: 911 FEFFAQSGNTWKKRENNMIRGCGVCPIYDTEYFDF 945



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 88/153 (57%), Gaps = 4/153 (2%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++ DL L  T+I E+PSSI  L  LE LTL  CK+L+ LP  +  L+ LR L + GC++L
Sbjct: 570 NMKDLALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQL 629

Query: 66  K--KFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
                  +++ +  L  L L+   +++E+P +I LL  L  L L E  ++ R P+SI  L
Sbjct: 630 DASNLHILLSGLASLETLKLEECRNLSEIPDNISLLSSLRELLLKET-DIERFPASIKHL 688

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
             L+ L++ GC +L+N+P+    ++ L   D S
Sbjct: 689 SKLEKLDVKGCRRLQNMPELPPSLKELYATDCS 721



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 6/123 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L L  CK L  L R+ + L+ L  L LSG S+  +F   + + D + ++ L  TAI 
Sbjct: 527 LVRLNLFYCKALTSL-RSDTHLRSLRDLFLSGCSRLEDF---SVTSDNMKDLALSSTAIN 582

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK--NVTETLGKVE 800
            LP+SI  L       L  CK+L  LP+ +  LRSLR +Y  GC++L   N+   L  + 
Sbjct: 583 ELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSGLA 642

Query: 801 SLE 803
           SLE
Sbjct: 643 SLE 645



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 29/172 (16%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI----- 701
           CSRL + +    ++  +    T I EL  +I  L  L  LTL+ CK+L +LP  +     
Sbjct: 558 CSRLEDFSVTSDNMKDLALSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRS 617

Query: 702 ---------------------SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                                S L  L TL L       E P+  S    L E+ L+ T 
Sbjct: 618 LRALYVHGCTQLDASNLHILLSGLASLETLKLEECRNLSEIPDNISLLSSLRELLLKETD 677

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           I   PASI+ LS     ++K C+ L+++P       SL+ +Y + CS L+ V
Sbjct: 678 IERFPASIKHLSKLEKLDVKGCRRLQNMPELP---PSLKELYATDCSSLETV 726



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L   + +E+L   I  +++L  ++LS      + P+ + + + L EI L G  ++
Sbjct: 457 LVELKLTWSR-VEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSKASN-LEEIELFGCKSL 514

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  SI  L+  +  NL  CK L SL S  + LRSLR ++ SGCS+L++ + T   ++ 
Sbjct: 515 LNVHPSILRLNKLVRLNLFYCKALTSLRSDTH-LRSLRDLFLSGCSRLEDFSVTSDNMKD 573

Query: 802 LEVRLSSWN 810
           L +  ++ N
Sbjct: 574 LALSSTAIN 582


>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1981

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 190/416 (45%), Gaps = 79/416 (18%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            M +  +L +L L   +S+ E+PSSI     L+ L L  C +L  LP  I +   L  L+L
Sbjct: 801  MGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDL 860

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              CS L + P  +  + +L +L L G +S+ E+PSS+  +  L++L L+ C NLV+LPSS
Sbjct: 861  RKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSS 920

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
                 +L  L+LSGC  L  +P ++G + +L+EL++   +            NL  L   
Sbjct: 921  FGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCS------------NLVKL--- 965

Query: 179  GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC------------ 226
                 P+S   +LHL F  L  + C     LPS   + SL +LDL+DC            
Sbjct: 966  -----PSSIG-NLHLLFT-LSLARCQKLEALPSNINLKSLERLDLTDCSQFKSFPEISTN 1018

Query: 227  -------GLGEAAIPSDIDNLHSLKELYLNR--------------------NNFVTLPAS 259
                   G     +PS I +   L  L+++                      +   +   
Sbjct: 1019 IECLYLDGTAVEEVPSSIKSWSRLTVLHMSYFEKLKEFSHVLDIITWLEFGEDIQEVAPW 1078

Query: 260  ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCID 319
            I  +  L  L L  C++L SLPQ+P +L  + A GC SL TL  +     +  +++N   
Sbjct: 1079 IKEISRLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETLDCSYN---NPLSLLNFAK 1135

Query: 320  SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ-NEGSSITV 374
              KL ++        R+++     S+       V PG+++P +F ++   G+S+T+
Sbjct: 1136 CFKLNQE-------ARDFIIQIPTSNDA-----VLPGAEVPAYFTHRATTGASLTI 1179



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 157/317 (49%), Gaps = 45/317 (14%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            TSI E+PS  + +TGL+ L L  C +L  LP +I +   L+ L+L GC +L K P  +  
Sbjct: 722  TSILELPSFTKNVTGLQSLDLNECSSLVELPSSIGNAINLQNLDL-GCLRLLKLPLSIVK 780

Query: 75   MEDLSKLYLDG------------------------TSIAEVPSSIELLPGLELLYLNECK 110
              +L K  L+G                        +S+ E+PSSI     L+ L L+ C 
Sbjct: 781  FTNLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCS 840

Query: 111  NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLM 169
            +LV+LPS I    +L+ L+L  C  L  +P ++G V +L  LD+SG +++    SS+  +
Sbjct: 841  SLVKLPSFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNI 900

Query: 170  KNLRSLYFSGCNE--------PPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTK 220
              L+ L    C+           A+  W L L       S C   + LPS  G + +L +
Sbjct: 901  SELQVLNLHNCSNLVKLPSSFGHATNLWRLDL-------SGCSSLVELPSSIGNITNLQE 953

Query: 221  LDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQS 279
            L+L +C      +PS I NLH L  L L R      LP++I+ L +LE L+L DC + +S
Sbjct: 954  LNLCNCS-NLVKLPSSIGNLHLLFTLSLARCQKLEALPSNIN-LKSLERLDLTDCSQFKS 1011

Query: 280  LPQIPPNLQFVRANGCS 296
             P+I  N++ +  +G +
Sbjct: 1012 FPEISTNIECLYLDGTA 1028



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 146/297 (49%), Gaps = 34/297 (11%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            S+ +VPS +  L  L++L L GC ++  LP    ++  L++L+L+ CS L + P  + +
Sbjct: 698 VSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKNVTGLQSLDLNECSSLVELPSSIGN 757

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN----------------------- 111
             +L  L L    + ++P SI     L+   LN C +                       
Sbjct: 758 AINLQNLDLGCLRLLKLPLSIVKFTNLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSS 817

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLM 169
           LV LPSSI    +L+ L+LS C  L  +P  +G   +LE LD+    + +  PT SI  +
Sbjct: 818 LVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPT-SIGHV 876

Query: 170 KNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSD 225
            NL  L  SGC+   E P+S      L   +L   +C   + LPS  G   +L +LDLS 
Sbjct: 877 TNLWRLDLSGCSSLVELPSSVGNISEL--QVLNLHNCSNLVKLPSSFGHATNLWRLDLSG 934

Query: 226 CGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           C      +PS I N+ +L+EL L N +N V LP+SI  L  L  L L  C++L++LP
Sbjct: 935 CS-SLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEALP 990



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 111/251 (44%), Gaps = 45/251 (17%)

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+ E+P  +     LE L L  C +LV++PS +  L  L+ L L GC  +  +P     V
Sbjct: 676 SLKELPD-LSTATNLEELILKYCVSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKNV 734

Query: 147 ESLEELDVS--GTAIRRPTS----------------------SIFLMKNLRSLYFSGCNE 182
             L+ LD++   + +  P+S                      SI    NL+    +GC  
Sbjct: 735 TGLQSLDLNECSSLVELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFTNLKKFILNGC-- 792

Query: 183 PPASASWHLHLPF-----NL--LGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIP 234
                S  + LPF     NL  L   +C   + LPS  G   +L  LDLS+C      +P
Sbjct: 793 -----SSLVELPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCS-SLVKLP 846

Query: 235 SDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFV 290
           S I N  +L+ L L + ++ V +P SI  + NL  L+L  C  L  LP    N   LQ +
Sbjct: 847 SFIGNATNLEILDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVL 906

Query: 291 RANGCSSLVTL 301
             + CS+LV L
Sbjct: 907 NLHNCSNLVKL 917



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 24/120 (20%)

Query: 27   LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
            L  L+ + L   KNL  LP   S+   L+TL L GCS L + P  + S  +L KL+L   
Sbjct: 1866 LGNLKWMNLFHSKNLKELP-DFSTATNLQTLILCGCSSLVELPYSIGSANNLQKLHL--- 1921

Query: 87   SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
                                  C +LV LP+SI  L  L+ + L GC KLE VP  +  +
Sbjct: 1922 --------------------CRCTSLVELPASIGNLHKLQNVTLKGCSKLEVVPTNINLI 1961



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 27/226 (11%)

Query: 641  PQEPGNCSRLWE-EADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
            P   G+ + LW  +      +V++ S   +I EL +          L L+ C NL +LP 
Sbjct: 870  PTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQV----------LNLHNCSNLVKLPS 919

Query: 700  TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSN 758
            +      L  L+LSG S   E P    +   L E++L   + +  LP+SI  L      +
Sbjct: 920  SFGHATNLWRLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLS 979

Query: 759  LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV----------RLSS 808
            L  C+ L++LPS IN L+SL  +  + CS+ K+  E    +E L +           + S
Sbjct: 980  LARCQKLEALPSNIN-LKSLERLDLTDCSQFKSFPEISTNIECLYLDGTAVEEVPSSIKS 1038

Query: 809  WNRPKM--QNDFDCVEQ--SAVETVTKLAKAELLRDSDSWKKNVDK 850
            W+R  +   + F+ +++    ++ +T L   E +++   W K + +
Sbjct: 1039 WSRLTVLHMSYFEKLKEFSHVLDIITWLEFGEDIQEVAPWIKEISR 1084



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + + + EL  +I     L  L L+ C +L +LP  I     L  L+L   S   E P 
Sbjct: 812 LGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEILDLRKCSSLVEIPT 871

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                  L  + L G +++  LP+S+  +S   + NL +C NL  LPS+     +L  + 
Sbjct: 872 SIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLWRLD 931

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCS L  +  ++G + +L+
Sbjct: 932 LSGCSSLVELPSSIGNITNLQ 952



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             ++  +L  L L G +S+ E+P SI     L+ L L  C +L  LP +I +L  L+ + L
Sbjct: 1886 FSTATNLQTLILCGCSSLVELPYSIGSANNLQKLHLCRCTSLVELPASIGNLHKLQNVTL 1945

Query: 60   SGCSKLKKFPQIVASMEDLSK 80
             GCSKL+  P  +  + D+ K
Sbjct: 1946 KGCSKLEVVPTNINLILDVKK 1966


>gi|105922648|gb|ABF81428.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1246

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 97/154 (62%), Gaps = 2/154 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  + +L  L L+G TS++EV  S+     L+ + L  CK++  LP  +  ++ L    L
Sbjct: 696 LTGIPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNLE-MESLEVCTL 754

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCSKL+KFP I  +M  L  L LD T I ++ SSI  L GL LL +N CKNL  +PSSI
Sbjct: 755 DGCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSI 814

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD 153
             LKSLK L+LSGC +L+ +P+ LGKVESLEE D
Sbjct: 815 GCLKSLKKLDLSGCSELKYIPENLGKVESLEEFD 848



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 2/148 (1%)

Query: 657 FPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
            P++  ++ +G T + E+  ++     L  + L  CK++  LP  +  ++ L    L G 
Sbjct: 699 IPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSIRILPNNLE-MESLEVCTLDGC 757

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           SK  +FP+I  + + L+ + L+ T I  L +SI  L G  L ++ +CKNLKS+PS+I  L
Sbjct: 758 SKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPSSIGCL 817

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +SL+ +  SGCS+LK + E LGKVESLE
Sbjct: 818 KSLKKLDLSGCSELKYIPENLGKVESLE 845



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 33/238 (13%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           NL  L     S   L+ + LS    L + P +   + +L  L L+G TS++EV  S+   
Sbjct: 665 NLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTG-IPNLKSLILEGCTSLSEVHPSLAHH 723

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L+ + L  CK++  LP+++  ++SL+   L GC KLE  PD  G +  L  L +  T 
Sbjct: 724 KKLQHVNLVNCKSIRILPNNLE-MESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETG 782

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCS 217
           I + +SSI                       H  +   LL  ++C     +PS  G + S
Sbjct: 783 ITKLSSSI-----------------------HYLIGLGLLSMNNCKNLKSIPSSIGCLKS 819

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKE---LYLNRNNF-VTLPAS-ISGLLNLEELE 270
           L KLDLS C      IP ++  + SL+E   L   R  F + +P + I G  N ++L+
Sbjct: 820 LKKLDLSGCS-ELKYIPENLGKVESLEEFDGLSNPRTRFGIAVPGNEIPGWFNHQKLQ 876



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 11/84 (13%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L    ++FPDI   ++       D T I +LS +I  L GL  L++N CKNL+ +P 
Sbjct: 757 CSKL----EKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIPS 812

Query: 700 TISALKYLSTLNLSGLSKFREFPE 723
           +I  LK L  L+LSG S+ +  PE
Sbjct: 813 SIGCLKSLKKLDLSGCSELKYIPE 836



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 127/340 (37%), Gaps = 62/340 (18%)

Query: 32  LLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSK--LYLDGTSI- 88
            L + G K         S +  LR L++          Q+    EDLS    +L+  S  
Sbjct: 591 FLDMPGIKEARWNMKAFSKMSRLRLLKIDNV-------QLFEGPEDLSNNLRFLEWHSYP 643

Query: 89  -AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
              +P+ +++   +EL   N   NL +L        +LK +NLS    L   PD  G   
Sbjct: 644 SKSLPAGLQVDELVELHMAN--SNLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTG--- 698

Query: 148 SLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE-PPASASWHLHLPFNLLGKSSCPVA 206
                                + NL+SL   GC        S   H     +   +C   
Sbjct: 699 ---------------------IPNLKSLILEGCTSLSEVHPSLAHHKKLQHVNLVNCKSI 737

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            +LP+   + SL    L  C   E   P    N++ L  L L+      L +SI  L+ L
Sbjct: 738 RILPNNLEMESLEVCTLDGCSKLEK-FPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGL 796

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
             L + +CK L+S+P                  +  G LK  + K  +  C   LK + +
Sbjct: 797 GLLSMNNCKNLKSIP------------------SSIGCLKSLK-KLDLSGC-SELKYIPE 836

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
           N   +  L E+     +S+P  +  I  PG++IP WF +Q
Sbjct: 837 NLGKVESLEEF---DGLSNPRTRFGIAVPGNEIPGWFNHQ 873



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 34/195 (17%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTL 688
           +K G++ +RR+SP+EPG  SRLW     + D+   L D T   +    +E +F    L +
Sbjct: 547 QKMGKEIIRRESPEEPGRRSRLW----TYKDVCLALMDNTGKEK----VEAIF----LDM 594

Query: 689 NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-------------------- 728
            G K      +  S +  L  L +  +  F E PE  S+                     
Sbjct: 595 PGIKEARWNMKAFSKMSRLRLLKIDNVQLF-EGPEDLSNNLRFLEWHSYPSKSLPAGLQV 653

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           D+L+E+H+  + +  L    +      + NL +  NL   P  + G+ +L+ +   GC+ 
Sbjct: 654 DELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPD-LTGIPNLKSLILEGCTS 712

Query: 789 LKNVTETLGKVESLE 803
           L  V  +L   + L+
Sbjct: 713 LSEVHPSLAHHKKLQ 727


>gi|147777715|emb|CAN66808.1| hypothetical protein VITISV_010918 [Vitis vinifera]
          Length = 615

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L LDG +S  EV  SI  L  + +L +K CK L S P +I  ++ L+ L  +GCS+
Sbjct: 385 NLEKLILDGCSSFLEVHPSIGRLKKIIVLNIKNCKKLGSFP-SIIDMEALKILNFAGCSE 443

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL-LPGLELLYLNECKNLVRLPSSINGLK 123
           LKKFP I  +ME L +LYL  T+I E+ SSI   + GL LL LN CK L  LP+ I  LK
Sbjct: 444 LKKFPDIQCNMEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIFKLK 503

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           SL  L LSGC KLEN P+ +  +E+L EL + GT+I     SI  +K L  L    C +
Sbjct: 504 SLXYLFLSGCSKLENFPEIMEDMENLXELLLDGTSIEALPFSIERLKGLGLLNMRKCKK 562



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 85/130 (65%), Gaps = 2/130 (1%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIEL-LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +M+ L +LYL  T+I E+ SSI   +TGL LL L  CK L+ LP  I  LK L  L LSG
Sbjct: 453 NMEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIFKLKSLXYLFLSG 512

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSKL+ FP+I+  ME+L +L LDGTSI  +P SIE L GL LL + +CK L R+ +++N 
Sbjct: 513 CSKLENFPEIMEDMENLXELLLDGTSIEALPFSIERLKGLGLLNMRKCKKL-RMRTNLNP 571

Query: 122 LKSLKTLNLS 131
           L  LK   +S
Sbjct: 572 LWVLKKYGVS 581



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 3/147 (2%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ DG +   E+  +I  L  ++ L +  CK L   P  I  ++ L  LN +G S
Sbjct: 384 PNLEKLILDGCSSFLEVHPSIGRLKKIIVLNIKNCKKLGSFPSIID-MEALKILNFAGCS 442

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL-LSGNILSNLKDCKNLKSLPSTINGL 775
           + ++FP+I  + + LLE++L  T I  L +SI   ++G +L +L  CK L  LP+ I  L
Sbjct: 443 ELKKFPDIQCNMEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIFKL 502

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESL 802
           +SL  ++ SGCSKL+N  E +  +E+L
Sbjct: 503 KSLXYLFLSGCSKLENFPEIMEDMENL 529



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 653 EADEFPDI-------VQVLSDGTDIRELSLAIEL-LFGLVQLTLNGCKNLERLPRTISAL 704
           E  +FPDI       +++    T I ELS +I   + GLV L LN CK L  LP  I  L
Sbjct: 443 ELKKFPDIQCNMEHLLELYLSSTTIEELSSSIGWHITGLVLLDLNRCKVLTCLPTCIFKL 502

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           K L  L LSG SK   FPEI    + L E+ L+GT+I  LP SIE L G  L N++ CK 
Sbjct: 503 KSLXYLFLSGCSKLENFPEIMEDMENLXELLLDGTSIEALPFSIERLKGLGLLNMRKCKK 562

Query: 765 LK 766
           L+
Sbjct: 563 LR 564



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 111/287 (38%), Gaps = 60/287 (20%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA----EVPSSIELLP 99
           L   +SS      +EL  C       Q+  S E L KL     S +    E+P      P
Sbjct: 327 LEYLLSSFYAKDLVELDMC--YNSLKQLWESDEPLEKLNTISVSFSQHLMEIPDFSIRAP 384

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            LE L L+ C + + +  SI  LK +  LN+  C KL + P                   
Sbjct: 385 NLEKLILDGCSSFLEVHPSIGRLKKIIVLNIKNCKKLGSFP------------------- 425

Query: 160 RRPTSSIFLMKNLRSLYFSGCNEPP--------------------------ASASWHLHL 193
                SI  M+ L+ L F+GC+E                            +S  WH+  
Sbjct: 426 -----SIIDMEALKILNFAGCSELKKFPDIQCNMEHLLELYLSSTTIEELSSSIGWHI-T 479

Query: 194 PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
              LL  + C V   LP+ +  + SL  L LS C   E   P  ++++ +L EL L+  +
Sbjct: 480 GLVLLDLNRCKVLTCLPTCIFKLKSLXYLFLSGCSKLE-NFPEIMEDMENLXELLLDGTS 538

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
              LP SI  L  L  L +  CK+L+    + P L  ++  G S  +
Sbjct: 539 IEALPFSIERLKGLGLLNMRKCKKLRMRTNLNP-LWVLKKYGVSKAI 584



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 4/124 (3%)

Query: 688 LNGCKN-LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLP 745
           L+ C N L++L  +   L+ L+T+++S      E P+ +     L ++ L+G ++   + 
Sbjct: 342 LDMCYNSLKQLWESDEPLEKLNTISVSFSQHLMEIPDFSIRAPNLEKLILDGCSSFLEVH 401

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES-LEV 804
            SI  L   I+ N+K+CK L S PS I+ + +L+++  +GCS+LK   +    +E  LE+
Sbjct: 402 PSIGRLKKIIVLNIKNCKKLGSFPSIID-MEALKILNFAGCSELKKFPDIQCNMEHLLEL 460

Query: 805 RLSS 808
            LSS
Sbjct: 461 YLSS 464



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 28/41 (68%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL 41
           M  M++L +L LDGTSI  +P SIE L GL LL ++ CK L
Sbjct: 523 MEDMENLXELLLDGTSIEALPFSIERLKGLGLLNMRKCKKL 563


>gi|224154407|ref|XP_002337473.1| predicted protein [Populus trichocarpa]
 gi|222839424|gb|EEE77761.1| predicted protein [Populus trichocarpa]
          Length = 187

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 97/159 (61%), Gaps = 3/159 (1%)

Query: 141 DTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
           + LG  ESLEELD+SGTAIRR P SS  L++ L+ L   GC              F    
Sbjct: 22  EELGHAESLEELDISGTAIRRQPPSSFSLVRKLKKLSLRGCKGQLLKTRMMFLSSFR--E 79

Query: 200 KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
           K +  ++L L S +G+CS   LDLS+C L E +IP D   L SL  L ++ NNF +LPA+
Sbjct: 80  KRTNSLSLSLNSFSGLCSFIALDLSNCNLQEESIPGDFSCLTSLSVLNVSGNNFTSLPAT 139

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           I  L NLE L L+DCKRLQSL ++P NL+FV A  C+SL
Sbjct: 140 IHELSNLEYLYLDDCKRLQSLGELPSNLKFVSAQACTSL 178



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 25/144 (17%)

Query: 1   MASMKDLSDLYLDGTSIT-EVPSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRT- 56
           +   + L +L + GT+I  + PSS  L+  L+ L+L+GCK   L +  + +SS +  RT 
Sbjct: 24  LGHAESLEELDISGTAIRRQPPSSFSLVRKLKKLSLRGCKGQLLKTRMMFLSSFREKRTN 83

Query: 57  -----------------LELSGCS-KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
                            L+LS C+ + +  P   + +  LS L + G +   +P++I  L
Sbjct: 84  SLSLSLNSFSGLCSFIALDLSNCNLQEESIPGDFSCLTSLSVLNVSGNNFTSLPATIHEL 143

Query: 99  PGLELLYLNECKNLV---RLPSSI 119
             LE LYL++CK L     LPS++
Sbjct: 144 SNLEYLYLDDCKRLQSLGELPSNL 167


>gi|227438283|gb|ACP30631.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1241

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 195/401 (48%), Gaps = 74/401 (18%)

Query: 7    LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            L  L L+G TS+ E+P  +E +  L  L ++GC +L  LP    +L  ++TL L+ CS L
Sbjct: 674  LQRLNLEGCTSLEELPREMERMKCLVFLNMRGCTSLRVLPHM--NLISMKTLILTNCSSL 731

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            + F ++V+  ++L  L+LDG++I ++P+++  L  L +L L +CK LV LP  +  LK+L
Sbjct: 732  QTF-RVVS--DNLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGKLKAL 788

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
            + L LSGC KL+  P  +  ++SL+ L + GT+I         M  +  L  S   + P 
Sbjct: 789  QELVLSGCSKLKTFPIRIENMKSLQLLLLDGTSITD-------MPKILQLNSSKVEDWPE 841

Query: 186  SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
                                  +   + G+ SL +L LS                     
Sbjct: 842  ----------------------LRRGMNGISSLQRLCLSG-------------------- 859

Query: 246  LYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
                 N+ +T L   IS L +L+ L+L+ CK L S+P +PPN++ + A+GC  L T+   
Sbjct: 860  -----NDIITNLRIDISLLCHLKLLDLKFCKNLTSIPLLPPNVEILDAHGCGKLKTVATP 914

Query: 305  LKLCR------SKYTIINCIDSLKLLRKNGLAI-SMLREYLELQAVSDPGHKLSIV---- 353
            + + +      SK+   NC +SL+   KN +   +  +  L+       GH    +    
Sbjct: 915  MAILKHMEKVHSKFIFTNC-NSLEQAAKNSITTYAQKKSQLDALRCYKEGHASEALFITS 973

Query: 354  FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
            FPGS++P WF ++  GS++ +  P +  + N++    +C V
Sbjct: 974  FPGSEVPSWFDHRMIGSTLKLKFPPHWCD-NRLSTIVLCAV 1013



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 11/129 (8%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  L+LDG++I ++P+++  L  L +L LK CK L  LP  +  LK L+ L LSGCSKL
Sbjct: 740 NLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGKLKALQELVLSGCSKL 799

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--NLVRLPSSINGLK 123
           K FP  + +M+ L  L LDGTSI ++P         ++L LN  K  +   L   +NG+ 
Sbjct: 800 KTFPIRIENMKSLQLLLLDGTSITDMP---------KILQLNSSKVEDWPELRRGMNGIS 850

Query: 124 SLKTLNLSG 132
           SL+ L LSG
Sbjct: 851 SLQRLCLSG 859



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 19/143 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT----------------- 725
           L +L L GC +LE LPR +  +K L  LN+ G +  R  P +                  
Sbjct: 674 LQRLNLEGCTSLEELPREMERMKCLVFLNMRGCTSLRVLPHMNLISMKTLILTNCSSLQT 733

Query: 726 --SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                D L  +HL+G+AI  LP ++  L   I+ NLKDCK L  LP  +  L++L+ +  
Sbjct: 734 FRVVSDNLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGKLKALQELVL 793

Query: 784 SGCSKLKNVTETLGKVESLEVRL 806
           SGCSKLK     +  ++SL++ L
Sbjct: 794 SGCSKLKTFPIRIENMKSLQLLL 816



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 48/212 (22%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DG+ I +L   +  L  L+ L L  CK L  LP  +  LK L  L LSG SK + FP   
Sbjct: 747 DGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGKLKALQELVLSGCSKLKTFPIRI 806

Query: 726 SSRDQLLEIHLEGTAIRGLPASIEL-------------------------LSGN-ILSNL 759
            +   L  + L+GT+I  +P  ++L                         LSGN I++NL
Sbjct: 807 ENMKSLQLLLLDGTSITDMPKILQLNSSKVEDWPELRRGMNGISSLQRLCLSGNDIITNL 866

Query: 760 ---------------KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
                          K CKNL S+P       ++ ++   GC KLK V   +  ++ +E 
Sbjct: 867 RIDISLLCHLKLLDLKFCKNLTSIPLLPP---NVEILDAHGCGKLKTVATPMAILKHMEK 923

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAE 836
             S +    +  + + +EQ+A  ++T  A+ +
Sbjct: 924 VHSKF----IFTNCNSLEQAAKNSITTYAQKK 951


>gi|297734814|emb|CBI17048.3| unnamed protein product [Vitis vinifera]
          Length = 872

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 144/292 (49%), Gaps = 48/292 (16%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   + E+P+    +  LE L L GC +L SLP  I   K L TL  +GCSKL  FP+I 
Sbjct: 533 DSQQLIELPN-FSNVPNLEELILSGCVSLESLPGDIHESKHLLTLHCTGCSKLASFPKIK 591

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
           +++  L +L LD T+I E+PSSIELL GL  L L+ CKNL  LP+SI  L+ L  L+L G
Sbjct: 592 SNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEG 651

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
           C KL+ +P+ L ++  LE L ++  + + P+ S   +  LR LY   CN  P        
Sbjct: 652 CSKLDRLPEDLERMPCLEVLYLNSLSCQLPSLSG--LSLLRELYLDQCNLTPG------- 702

Query: 193 LPFNLLGKSSCPVALMLPSLTGVC--------------SLTKLDLSDCGLGEAAIPSDID 238
               ++   +C  AL   SL G C              SL  L+LS C   E    SDI 
Sbjct: 703 ----VIKSDNCLNALKEFSL-GNCILNGGVFHCIFHLSSLEVLNLSRCSPEEGGTLSDI- 756

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
                                IS L NL  L+L  CK+L  +P++P +L+ +
Sbjct: 757 ------------------LVGISQLSNLRALDLSHCKKLSQIPELPSSLRLL 790



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 79/122 (64%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L+GC +LE LP  I   K+L TL+ +G SK   FP+I S+  +L E+ L+ TAI+
Sbjct: 549 LEELILSGCVSLESLPGDIHESKHLLTLHCTGCSKLASFPKIKSNIAKLEELCLDETAIK 608

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+SIELL G    NL +CKNL+ LP++I  LR L ++   GCSKL  + E L ++  L
Sbjct: 609 ELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRLPEDLERMPCL 668

Query: 803 EV 804
           EV
Sbjct: 669 EV 670



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 8/187 (4%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +++  L +L LD T+I E+PSSIELL GL  L L  CKNL  LP +I +L+ L  L L G
Sbjct: 592 SNIAKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEG 651

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSKL + P+ +  M  L  LYL+  S      S   L  L  LYL++C     +  S N 
Sbjct: 652 CSKLDRLPEDLERMPCLEVLYLNSLSCQLPSLSGLSL--LRELYLDQCNLTPGVIKSDNC 709

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS------GTAIRRPTSSIFLMKNLRSL 175
           L +LK  +L  C     V   +  + SLE L++S      G  +      I  + NLR+L
Sbjct: 710 LNALKEFSLGNCILNGGVFHCIFHLSSLEVLNLSRCSPEEGGTLSDILVGISQLSNLRAL 769

Query: 176 YFSGCNE 182
             S C +
Sbjct: 770 DLSHCKK 776



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 37/58 (63%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           D T I+EL  +IELL GL  L L+ CKNLE LP +I  L++L  L+L G SK    PE
Sbjct: 603 DETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRLPE 660


>gi|255542420|ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223548234|gb|EEF49725.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 172/388 (44%), Gaps = 63/388 (16%)

Query: 40   NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
            NL    +    LK L+ L+ S    L   P + + + +L +L L    ++ EV  SIE L
Sbjct: 659  NLKHAWIGARGLKQLKILDFSHSYGLVSTPDL-SGLPNLERLKLKSCINLVEVHKSIENL 717

Query: 99   PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              L LL L +CK L +LP  I  L+SL+ L LSGC +L+ +   L K+ESL+ L + G  
Sbjct: 718  EKLVLLNLKDCKRLRKLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKVLHMDGFK 777

Query: 159  IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
                 S        R L F          SW       L  +     +L L  L   CSL
Sbjct: 778  HYTAKS--------RQLTF---------WSW-------LSRRQGMDSSLALTFLP--CSL 811

Query: 219  TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
              L L+DC L +  +  D+  L SLK L L+ N+   LP +ISGL  LE L L++C+ LQ
Sbjct: 812  DHLSLADCDLSDDTV--DLSCLSSLKCLNLSGNSISCLPKTISGLTKLESLVLDNCRSLQ 869

Query: 279  SLPQIPPNLQFVRAN-----------------------GCSSLVTLFGALKL---CRSKY 312
            SL ++P +L+ + A                        GC  LV + G  KL        
Sbjct: 870  SLSELPASLRELNAENCTSLERITNLPNLMTSLRLNLAGCEQLVEVQGFFKLEPINNHDK 929

Query: 313  TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG--HKL---SIVFPGSQIPKWFMYQN 367
             + N +    L     + + M         ++ P   H+    SI  PGS++P W+  QN
Sbjct: 930  EMANMLGLFNLGPVETIKVEMFSVMTMTSRITPPKVLHECGICSIFLPGSEVPGWYSPQN 989

Query: 368  EGSSITVTRPSYLYNVNKVVGFAICCVF 395
            EG  I+ T P    +V KV G  IC V+
Sbjct: 990  EGPLISFTMPP--SHVRKVCGLNICIVY 1015



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 12/98 (12%)

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           +ST +LSGL           S   L+E+H           SIE L   +L NLKDCK L+
Sbjct: 685 VSTPDLSGLPNLERLK--LKSCINLVEVH----------KSIENLEKLVLLNLKDCKRLR 732

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            LP  I  LRSL  +  SGCS+L  ++  L K+ESL+V
Sbjct: 733 KLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKV 770



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 44/166 (26%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +IE L  LV L L  CK L +LPR I  L+ L  L LSG S+  +        + L
Sbjct: 709 EVHKSIENLEKLVLLNLKDCKRLRKLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESL 768

Query: 732 LEIHLEG--------------------------TAIRGLPASIELLSG------------ 753
             +H++G                           A+  LP S++ LS             
Sbjct: 769 KVLHMDGFKHYTAKSRQLTFWSWLSRRQGMDSSLALTFLPCSLDHLSLADCDLSDDTVDL 828

Query: 754 NILSNLKDCKNLKS-----LPSTINGLRSLRMMYPSGCSKLKNVTE 794
           + LS+LK C NL       LP TI+GL  L  +    C  L++++E
Sbjct: 829 SCLSSLK-CLNLSGNSISCLPKTISGLTKLESLVLDNCRSLQSLSE 873


>gi|356497814|ref|XP_003517752.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 191/435 (43%), Gaps = 106/435 (24%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLS-----------------------S 43
            L +L L+ T++ E+P S+  L  LE L+L GCK+LS                        
Sbjct: 817  LQELSLNHTALEELPYSVGSLEKLEKLSLVGCKSLSVIPNSIGNLISLAQLFLDISGIKE 876

Query: 44   LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
            LP +I SL  LR L + GC+ L K P  + ++  + +L LDGT I  +P  I+ +  LE 
Sbjct: 877  LPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQLDGTKITTLPDQIDAMQMLEK 936

Query: 104  LYLNECKNL-----------------------VRLPSSINGLKSLKTLNLSGCCKLENVP 140
            L +  C+NL                         LP SI  L++L  L L  C +L+ +P
Sbjct: 937  LEMKNCENLRFLPVSFGCLSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLP 996

Query: 141  DTLGKVESLEELDVSGTAIRRPTSSIFLMKNL------RSLYFSGC--------NEPPAS 186
            D+ G ++SL+ L +  T +     S  ++ +L      R LY +G          EP + 
Sbjct: 997  DSFGNLKSLQWLQMKETTLTHLPDSFGMLTSLVKLDMERRLYLNGATGVIIPNKQEPNSK 1056

Query: 187  ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLGE-AAIPSDIDNLHSLK 244
            A                        L   C+LT L+ L+  G G    IP D + L SL+
Sbjct: 1057 AI-----------------------LRSFCNLTLLEELNAHGWGMCGKIPDDFEKLSSLE 1093

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG- 303
             L L  NN  +LPAS+ GL  L++L L DC+ L  LP +P +L+ +    C ++  +   
Sbjct: 1094 TLSLGHNNIFSLPASMIGLSYLKKLLLSDCRELIFLPPLPSSLEELNLANCIAVQYMHDI 1153

Query: 304  ALKLCRSKYTIINC--------IDSLKLLRK------NGLAISMLREYLELQAVSDPGHK 349
            +      +  + NC        ++ LK LR+       G + ++ R + ++        K
Sbjct: 1154 SNLKLLEELNLTNCEKVVDIPGLEHLKSLRRLYMNGCIGCSHAVKRRFTKVLL-----KK 1208

Query: 350  LSI-VFPGSQIPKWF 363
            L I + PGS++P WF
Sbjct: 1209 LEILIMPGSRVPDWF 1223



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 29/300 (9%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            + +  +  S+  L+ L  L L+ C NL  LP  +S +K L  L LS C KLK  P+ ++ 
Sbjct: 707  SHLIRIHESLGNLSSLVHLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSC 766

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS----------------- 117
            M  L +L +D T++ E+P SI  L  LE L  N C +L RLP+                 
Sbjct: 767  MICLRQLLIDNTAVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTA 826

Query: 118  ------SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
                  S+  L+ L+ L+L GC  L  +P+++G + SL +L +  + I+   +SI  +  
Sbjct: 827  LEELPYSVGSLEKLEKLSLVGCKSLSVIPNSIGNLISLAQLFLDISGIKELPASIGSLSY 886

Query: 172  LRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
            LR L   GC   ++ P S    + +    L      +  +   +  +  L KL++ +C  
Sbjct: 887  LRKLSVGGCTSLDKLPVSIEALVSIVE--LQLDGTKITTLPDQIDAMQMLEKLEMKNCE- 943

Query: 229  GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
                +P     L +L  L L+  N   LP SI  L NL  L L+ CK+LQ LP    NL+
Sbjct: 944  NLRFLPVSFGCLSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLK 1003



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 110/230 (47%), Gaps = 4/230 (1%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNL 112
           L  L LS C +L   P +   +  L K+ L+  S +  +  S+  L  L  L L  C NL
Sbjct: 675 LMVLNLSNCHRLTATPDLTGYLS-LKKIVLEECSHLIRIHESLGNLSSLVHLNLRFCYNL 733

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
           V LPS ++G+K L+ L LS C KL+ +P  L  +  L +L +  TA+     SIF +  L
Sbjct: 734 VELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPESIFHLTKL 793

Query: 173 RSLYFSGCNEPPASASWHLHL-PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA 231
            +L  +GCN      +    L     L  +   +  +  S+  +  L KL L  C    +
Sbjct: 794 ENLSANGCNSLKRLPTCIGKLCSLQELSLNHTALEELPYSVGSLEKLEKLSLVGCK-SLS 852

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            IP+ I NL SL +L+L+ +    LPASI  L  L +L +  C  L  LP
Sbjct: 853 VIPNSIGNLISLAQLFLDISGIKELPASIGSLSYLRKLSVGGCTSLDKLP 902



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 10/166 (6%)

Query: 662 QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREF 721
           Q+L D T + EL  +I  L  L  L+ NGC +L+RLP  I  L  L  L+L+  +   E 
Sbjct: 772 QLLIDNTAVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNH-TALEEL 830

Query: 722 PEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK---DCKNLKSLPSTINGLRS 777
           P    S ++L ++ L G  ++  +P SI    GN++S  +   D   +K LP++I  L  
Sbjct: 831 PYSVGSLEKLEKLSLVGCKSLSVIPNSI----GNLISLAQLFLDISGIKELPASIGSLSY 886

Query: 778 LRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWNRPKMQNDFDCVE 822
           LR +   GC+ L  +  ++  + S+ E++L       + +  D ++
Sbjct: 887 LRKLSVGGCTSLDKLPVSIEALVSIVELQLDGTKITTLPDQIDAMQ 932



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 3/145 (2%)

Query: 660  IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR 719
            + Q+  D + I+EL  +I  L  L +L++ GC +L++LP +I AL  +  L L G +K  
Sbjct: 864  LAQLFLDISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQLDG-TKIT 922

Query: 720  EFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
              P+   +   L ++ ++    +R LP S   LS     +L +  N+  LP +I  L +L
Sbjct: 923  TLPDQIDAMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDLHET-NITELPESIGMLENL 981

Query: 779  RMMYPSGCSKLKNVTETLGKVESLE 803
              +    C +L+ + ++ G ++SL+
Sbjct: 982  IRLRLDMCKQLQRLPDSFGNLKSLQ 1006



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 2/135 (1%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T + +L ++IE L  +V+L L+G K +  LP  I A++ L  L +      R  P     
Sbjct: 896  TSLDKLPVSIEALVSIVELQLDGTK-ITTLPDQIDAMQMLEKLEMKNCENLRFLPVSFGC 954

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
               L  + L  T I  LP SI +L   I   L  CK L+ LP +   L+SL+ +     +
Sbjct: 955  LSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQMKETT 1014

Query: 788  KLKNVTETLGKVESL 802
             L ++ ++ G + SL
Sbjct: 1015 -LTHLPDSFGMLTSL 1028



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  LV L L  C NL  LP  +S +K+L  L LS   K +  P+  S    L ++ ++ T
Sbjct: 719 LSSLVHLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNT 778

Query: 740 AIRGLPASIELLSGNILSNL--KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           A+  LP SI  L+   L NL    C +LK LP+ I  L SL+ +  +  + L+ +  ++G
Sbjct: 779 AVTELPESIFHLTK--LENLSANGCNSLKRLPTCIGKLCSLQELSLNHTA-LEELPYSVG 835

Query: 798 KVESLE 803
            +E LE
Sbjct: 836 SLEKLE 841



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 3/127 (2%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L QL L+    ++ LP +I +L YL  L++ G +   + P    +   ++E+ L+GT
Sbjct: 861 LISLAQLFLD-ISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQLDGT 919

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            I  LP  I+ +       +K+C+NL+ LP +   L +L  +     + +  + E++G +
Sbjct: 920 KITTLPDQIDAMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDLHE-TNITELPESIGML 978

Query: 800 ESLEVRL 806
           E+L +RL
Sbjct: 979 ENL-IRL 984


>gi|147811645|emb|CAN72675.1| hypothetical protein VITISV_020405 [Vitis vinifera]
          Length = 1919

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 91/144 (63%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            LE L LK    + SLP +I  LK L  L LS  SKL+ FP+++  ME+L +  LDGT I 
Sbjct: 1599 LEFLRLKLGAKILSLPTSICRLKSLEYLFLSSXSKLENFPEVMVDMENLKERLLDGTYIE 1658

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
             +PSSI+ L GL LL L +C+NLV LP  +  L SL+TL +SGC +L N+P  L  ++ L
Sbjct: 1659 GLPSSIDRLKGLVLLNLRKCQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPRNLRSLQRL 1718

Query: 150  EELDVSGTAIRRPTSSIFLMKNLR 173
             +L   GTAI +P  SI L+ NL+
Sbjct: 1719 SQLHADGTAITQPPDSIVLLINLQ 1742



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 67/102 (65%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            M  M++L +  LDGT I  +PSSI+ L GL LL L+ C+NL SLP  +  L  L TL +S
Sbjct: 1641 MVDMENLKERLLDGTYIEGLPSSIDRLKGLVLLNLRKCQNLVSLPKGMCKLTSLETLIVS 1700

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
            GCS+L   P+ + S++ LS+L+ DGT+I + P SI LL  L+
Sbjct: 1701 GCSQLNNLPRNLRSLQRLSQLHADGTAITQPPDSIVLLINLQ 1742



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 62/106 (58%)

Query: 697  LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
            LP +I  LK L  L LS  SK   FPE+    + L E  L+GT I GLP+SI+ L G +L
Sbjct: 1613 LPTSICRLKSLEYLFLSSXSKLENFPEVMVDMENLKERLLDGTYIEGLPSSIDRLKGLVL 1672

Query: 757  SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             NL+ C+NL SLP  +  L SL  +  SGCS+L N+   L  ++ L
Sbjct: 1673 LNLRKCQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPRNLRSLQRL 1718



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 7/104 (6%)

Query: 655  DEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
            + FP+++       + L DGT I  L  +I+ L GLV L L  C+NL  LP+ +  L  L
Sbjct: 1635 ENFPEVMVDMENLKERLLDGTYIEGLPSSIDRLKGLVLLNLRKCQNLVSLPKGMCKLTSL 1694

Query: 708  STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
             TL +SG S+    P    S  +L ++H +GTAI   P SI LL
Sbjct: 1695 ETLIVSGCSQLNNLPRNLRSLQRLSQLHADGTAITQPPDSIVLL 1738



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 37/236 (15%)

Query: 38   CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-ASMEDLSKLYLDGTSIAEVPSSIE 96
            C N S + +T + ++  RT  ++      KF  I  A    L KL+   T         +
Sbjct: 1538 CDNKSXISITQNXVQHGRTKHIN-----VKFHSIXEAEKNSLVKLHYCSTDEQJXDIMTK 1592

Query: 97   LLPG--LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
             LP   LE L L     ++ LP+SI  LKSL+ L LS   KLEN P+ +  +E+L+E  +
Sbjct: 1593 GLPKSRLEFLRLKLGAKILSLPTSICRLKSLEYLFLSSXSKLENFPEVMVDMENLKERLL 1652

Query: 155  SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
             GT I    SSI  +K L                        LL    C   + LP   G
Sbjct: 1653 DGTYIEGLPSSIDRLKGLV-----------------------LLNLRKCQNLVSLPK--G 1687

Query: 215  VCSLTKLD---LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
            +C LT L+   +S C      +P ++ +L  L +L+ +       P SI  L+NL+
Sbjct: 1688 MCKLTSLETLIVSGCS-QLNNLPRNLRSLQRLSQLHADGTAITQPPDSIVLLINLQ 1742



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 132/336 (39%), Gaps = 72/336 (21%)

Query: 207  LMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGL 263
            L LP  T +C L  L+   LS     E   P  + ++ +LKE  L+      LP+SI  L
Sbjct: 1611 LSLP--TSICRLKSLEYLFLSSXSKLEN-FPEVMVDMENLKERLLDGTYIEGLPSSIDRL 1667

Query: 264  LNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDS 320
              L  L L  C+ L SLP+      +L+ +  +GCS L  L   L+           +  
Sbjct: 1668 KGLVLLNLRKCQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPRNLR----------SLQR 1717

Query: 321  LKLLRKNGLAIS------MLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
            L  L  +G AI+      +L   L+  +  D   +  IVF                   +
Sbjct: 1718 LSQLHADGTAITQPPDSIVLLINLQWNSRVDLASECGIVF------------------KI 1759

Query: 375  TRPSYLYNVNKVVGFAICCVFQ------VPKHSTGTYLFHSYPAHELECSMDGSGEGHYI 428
              P+  YN +  +GFA+C + +      + + ++  + +            D    GH  
Sbjct: 1760 ELPTDWYN-DDFLGFALCSILEHLPERIICRLNSDVFYYG-----------DLKDFGH-- 1805

Query: 429  YFRGKFGHVVSDHLWLLFLP-RHGHNWQFES----NLIRLSF----RSISDPTWKVKRCG 479
             F  K G V S+H WL + P      +QF      N I +SF    R  S  +  VK+CG
Sbjct: 1806 DFHWKXGIVRSEHXWLGYQPCSQLRLFQFNEPNDWNYIEISFEAAHRFNSSASNVVKKCG 1865

Query: 480  FHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVG 515
               IY  ++E      ++  +   CN+ E   D  G
Sbjct: 1866 VCLIYAEDLEGIHPQNRKQLKSRGCNVVERSSDRDG 1901


>gi|357456781|ref|XP_003598671.1| Resistance protein [Medicago truncatula]
 gi|355487719|gb|AES68922.1| Resistance protein [Medicago truncatula]
          Length = 1158

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 173/407 (42%), Gaps = 110/407 (27%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            M++  +L  LYLD   +IT++  S+  L  LE LT  GC +L ++PV    L  LR L  
Sbjct: 727  MSAAPNLMTLYLDNCINITKIHDSVGFLDNLEELTATGCTSLETIPVAFE-LSSLRVLSF 785

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CSKL +FP+I+  +E+L  + L  T+I E+P SI  + GLE+L L +C  L +LPSSI
Sbjct: 786  SECSKLTRFPEILCKIENLQHINLCQTAIEELPFSIGNVTGLEVLTLMDCTRLDKLPSSI 845

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              L  L+ +    C          G     EE                   +   L F+ 
Sbjct: 846  FTLPRLQEIQADSC-------KGFGISTEFEE-------------------DNGPLNFTV 879

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVA--LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
            C   P     HLHL       SSC +    +   L+G  ++  LD+S             
Sbjct: 880  C---PNKI--HLHL-------SSCNLTDEHLFICLSGFANVVHLDIS------------- 914

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
                         +NF  LP  I   +NL+ L L +C +LQ +  IP NL+ + A+ C+S
Sbjct: 915  ------------YSNFTVLPPCIKQCINLKALVLTNCMQLQEISAIPQNLREIDASNCTS 962

Query: 298  LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
            L +        +S+  +++                        QA  + G K +++ PGS
Sbjct: 963  LTS--------QSQSVLLS------------------------QAYHETGEK-TVMLPGS 989

Query: 358  QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF----QVPKH 400
             IP+WF + +   SI+       Y   +     +C VF     +P H
Sbjct: 990  SIPEWFDHSSSERSIS------FYARKRFPRICVCVVFGMSENLPHH 1030



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 1/131 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L +  +I ++  ++  L  L +LT  GC +LE +P     L  L  L+ S  SK   FPE
Sbjct: 738 LDNCINITKIHDSVGFLDNLEELTATGCTSLETIPVAFE-LSSLRVLSFSECSKLTRFPE 796

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           I    + L  I+L  TAI  LP SI  ++G  +  L DC  L  LPS+I  L  L+ +  
Sbjct: 797 ILCKIENLQHINLCQTAIEELPFSIGNVTGLEVLTLMDCTRLDKLPSSIFTLPRLQEIQA 856

Query: 784 SGCSKLKNVTE 794
             C      TE
Sbjct: 857 DSCKGFGISTE 867


>gi|296081067|emb|CBI18261.3| unnamed protein product [Vitis vinifera]
          Length = 221

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 125/223 (56%), Gaps = 23/223 (10%)

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           +  ME L KL LD T+I ++PSSIE L GLE L L+ CK+L+ +P SI  L SLK LN  
Sbjct: 1   MGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFD 60

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            C KLE +P+ L  ++ L++L +     + P+ S      L SL     +E         
Sbjct: 61  FCSKLEKLPEDLKSLKCLQKLYLQDLNCQLPSVS-----GLCSLKVLNLSES-------- 107

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
               N++ K       +L ++  + SL +L L++C L +  IPS++  L SLKEL L+ N
Sbjct: 108 ----NVIDKG------ILINICHLSSLEELYLNNCNLMDGEIPSEVCQLSSLKELDLSWN 157

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
           +F ++PASIS L  L+ L L  C+ L  +P++P  LQF+ A+ 
Sbjct: 158 HFSSIPASISQLSKLKALGLSHCRNLLQIPELPSTLQFLDAHN 200



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 6/183 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L LD T+I ++PSSIE L GLE L L  CK+L ++P +I +L  L+ L   
Sbjct: 1   MGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFD 60

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            CSKL+K P+ + S++ L KLYL   +  ++P S+  L  L++L L+E  N++     IN
Sbjct: 61  FCSKLEKLPEDLKSLKCLQKLYLQDLN-CQLP-SVSGLCSLKVLNLSE-SNVIDKGILIN 117

Query: 121 --GLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
              L SL+ L L+ C  ++  +P  + ++ SL+ELD+S        +SI  +  L++L  
Sbjct: 118 ICHLSSLEELYLNNCNLMDGEIPSEVCQLSSLKELDLSWNHFSSIPASISQLSKLKALGL 177

Query: 178 SGC 180
           S C
Sbjct: 178 SHC 180



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 47/75 (62%)

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           ++L ++ L+ TAI  LP+SIE L G    +L +CK+L ++P +I  L SL+ +    CSK
Sbjct: 5   EKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSK 64

Query: 789 LKNVTETLGKVESLE 803
           L+ + E L  ++ L+
Sbjct: 65  LEKLPEDLKSLKCLQ 79



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 10/151 (6%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T I +L  +IE L GL  L L+ CK+L  +P++I  L  L  LN    SK  + PE  
Sbjct: 13  DNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDL 72

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNIL----SNLKDCKNLKSLPSTINGLRSLRMM 781
            S   L +++L+    + LP+   L S  +L    SN+ D    K +   I  L SL  +
Sbjct: 73  KSLKCLQKLYLQDLNCQ-LPSVSGLCSLKVLNLSESNVID----KGILINICHLSSLEEL 127

Query: 782 YPSGCSKLK-NVTETLGKVESLEVRLSSWNR 811
           Y + C+ +   +   + ++ SL+    SWN 
Sbjct: 128 YLNNCNLMDGEIPSEVCQLSSLKELDLSWNH 158


>gi|224145367|ref|XP_002325616.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862491|gb|EEE99997.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 889

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 203/469 (43%), Gaps = 111/469 (23%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+TEVPSS++ L  LE + L  C NL S P+  S  K L  L +S C  +   P I 
Sbjct: 478 DCPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFPMLDS--KVLSFLSISRCLYVTTCPMI- 534

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
              ++L  L L+ TSI EVP S+                            +L+ LNL G
Sbjct: 535 --SQNLVWLRLEQTSIKEVPQSVT--------------------------GNLQLLNLDG 566

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
           C K+   P+ L   E +EEL++ GTAI+   SSI  +  LR                HL+
Sbjct: 567 CSKMTKFPENL---EDIEELNLRGTAIKEVPSSIQFLTRLR----------------HLN 607

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
           +       S C      P +T                         ++ SL+ L L++  
Sbjct: 608 M-------SGCSKLESFPEITV------------------------HMKSLEHLILSKTG 636

Query: 253 FVTLP-ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
              +P  S   +++L  L+L D   +++LP++PP+L+++  + C+SL T+   + + R +
Sbjct: 637 IKEIPLISFKHMISLISLDL-DGTPIKALPELPPSLRYLNTHDCASLETVTSTINIGRLR 695

Query: 312 YTI--INCIDSLKLLRKNGLAISMLREYLELQAVSD-PGHKLSIVFPGSQIPKWFMYQNE 368
             +   NC      L +  L  +M   +L++Q+  + P   + +V PGS+IP+WF  +  
Sbjct: 696 LGLDFTNCFK----LDQKPLVAAM---HLKIQSGEEIPDGSIQMVLPGSEIPEWFGDKGI 748

Query: 369 GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM-------DG 421
           GSS+T+  PS  +   ++ G A C VF  P  S G      Y     +C +       DG
Sbjct: 749 GSSLTIQLPSNCH--QQLKGIAFCLVFLAPLPSHGFSFSDVY----FDCHVKSENGENDG 802

Query: 422 SGEGHYIYFRGKFGHVV----SDHLWLLF-LPRHGHNWQFESNLIRLSF 465
             E      +    H +    SDH+ LL+ L    H  ++  N +   F
Sbjct: 803 DDEVVLASQKSLLSHYLRTCDSDHMILLYKLELVDHLRKYSGNEVTFKF 851



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 86/168 (51%), Gaps = 8/168 (4%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +++D+ +L L GT+I EVPSSI+ LT L  L + GC  L S P     +K L  L LS  
Sbjct: 576 NLEDIEELNLRGTAIKEVPSSIQFLTRLRHLNMSGCSKLESFPEITVHMKSLEHLILSK- 634

Query: 63  SKLKKFPQI-VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           + +K+ P I    M  L  L LDGT I  +P   EL P L  L  ++C +L  + S+IN 
Sbjct: 635 TGIKEIPLISFKHMISLISLDLDGTPIKALP---ELPPSLRYLNTHDCASLETVTSTINI 691

Query: 122 LKSLKTLNLSGCCKLENVPDTLG---KVESLEELDVSGTAIRRPTSSI 166
            +    L+ + C KL+  P       K++S EE+      +  P S I
Sbjct: 692 GRLRLGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDGSIQMVLPGSEI 739



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 631 WGR--QTVRRQSPQE-PGN--------CSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL 679
           W R  QT  ++ PQ   GN        CS++ +  +   DI ++   GT I+E+  +I+ 
Sbjct: 540 WLRLEQTSIKEVPQSVTGNLQLLNLDGCSKMTKFPENLEDIEELNLRGTAIKEVPSSIQF 599

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR-DQLLEIHLEG 738
           L  L  L ++GC  LE  P     +K L  L LS  +  +E P I+      L+ + L+G
Sbjct: 600 LTRLRHLNMSGCSKLESFPEITVHMKSLEHLILSK-TGIKEIPLISFKHMISLISLDLDG 658

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
           T I+ LP   EL       N  DC +L+++ STIN
Sbjct: 659 TPIKALP---ELPPSLRYLNTHDCASLETVTSTIN 690



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 5/89 (5%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           +++ +P++++    L  LNL G SK  +FPE   + + + E++L GTAI+ +P+SI+ L+
Sbjct: 547 SIKEVPQSVTG--NLQLLNLDGCSKMTKFPE---NLEDIEELNLRGTAIKEVPSSIQFLT 601

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMM 781
                N+  C  L+S P     ++SL  +
Sbjct: 602 RLRHLNMSGCSKLESFPEITVHMKSLEHL 630



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 43/158 (27%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI----------- 734
           L L  C +L  +P ++  L  L  ++LS  +  R FP + S     L I           
Sbjct: 474 LRLKDCPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFPMLDSKVLSFLSISRCLYVTTCPM 533

Query: 735 --------HLEGTAIRGLPASIELLSGNI-LSNLKDCKNL-------------------- 765
                    LE T+I+ +P S+   +GN+ L NL  C  +                    
Sbjct: 534 ISQNLVWLRLEQTSIKEVPQSV---TGNLQLLNLDGCSKMTKFPENLEDIEELNLRGTAI 590

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           K +PS+I  L  LR +  SGCSKL++  E    ++SLE
Sbjct: 591 KEVPSSIQFLTRLRHLNMSGCSKLESFPEITVHMKSLE 628


>gi|357500371|ref|XP_003620474.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495489|gb|AES76692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1112

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 177/404 (43%), Gaps = 55/404 (13%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            P LE L L EC NLV L  SI  L+ L  LNL GC  LE++P+ +  + SLE+L++ G 
Sbjct: 507 FPNLEWLSLEECINLVELDPSIGLLEKLSYLNLDGCYSLESIPNNIFSLSSLEDLNMRGC 566

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVC 216
                 S +F             ++P      HL  P  +           +LP L  + 
Sbjct: 567 ------SKVF-------------DDP-----MHLKKPDISESASQDSTDTYLLPLLCRLY 602

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  +D+S C L +  +P  I+ L SL+ L L  N FVTLP S+  L  L  L LE C+ 
Sbjct: 603 LLRTVDISFCRLSQ--VPDAIECLSSLERLNLGGNYFVTLP-SLWKLSKLVYLNLEHCEL 659

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN--GLAISML 334
           L+SLPQ+P      R    +   T         +   I NC    +  R++   +  S +
Sbjct: 660 LESLPQLPSPTTIGRDRRENKWWT---------TGLVIFNCPKLAESEREHCRSMTFSWM 710

Query: 335 REYLELQAVSDPGH--KLSIVFPGSQIPKWFMYQNEGSSITVT-RPSYLYNVNKVVGFAI 391
            ++++    S P +  +  IV PGS+IP W    + G SI +   P    N+N ++GF  
Sbjct: 711 AQFIKAYPHSYPAYLDEFHIVVPGSEIPNWINNHSMGDSIPIEFSPPMHDNINDIIGFVC 770

Query: 392 CCVFQV-PKHSTGTYLFHSYPAHELECSMDGSGEGHY---IYFRGKFGHVVSDHLWLLFL 447
           C VF V P  S  T      P       + G  +      +   G F    S HLW+++ 
Sbjct: 771 CAVFSVAPPDSIFT------PWDPPWVRITGISDIKLKIPVIINGSFRTTKSSHLWIIYF 824

Query: 448 PRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEF 491
           PR G   +F    I     S      +VK CG+  +  H+++E 
Sbjct: 825 PR-GSRHEFRK--IHFDIFSAKISPMRVKSCGYRWVCKHDLQEL 865



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 63/147 (42%), Gaps = 24/147 (16%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++ E+  SI LL  L  L L GC +L S+P  I SL  L  L + GCSK+   P  +   
Sbjct: 520 NLVELDPSIGLLEKLSYLNLDGCYSLESIPNNIFSLSSLEDLNMRGCSKVFDDPMHLKKP 579

Query: 76  EDLSKLYLDGTS----------------------IAEVPSSIELLPGLELLYLNECKNLV 113
           +       D T                       +++VP +IE L  LE L L      V
Sbjct: 580 DISESASQDSTDTYLLPLLCRLYLLRTVDISFCRLSQVPDAIECLSSLERLNLG-GNYFV 638

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVP 140
            LP S+  L  L  LNL  C  LE++P
Sbjct: 639 TLP-SLWKLSKLVYLNLEHCELLESLP 664


>gi|449526134|ref|XP_004170069.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
            [Cucumis sativus]
          Length = 1195

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 184/389 (47%), Gaps = 48/389 (12%)

Query: 26   LLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI-VASMEDLSKLYLD 84
             L  L +L L+GCK L  LP +    + L+ L LS C  LK+     +AS  +L    L 
Sbjct: 754  FLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIAS--NLEIFDLR 811

Query: 85   GT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
            G  S+  +  S+  L  L  L L+ C  L  LPS +  LKSL +L+L+ C K+E +P+  
Sbjct: 812  GCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFD 870

Query: 144  GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLHLPFNLLGKSS 202
              ++SL E+++ GTAIR+  +SI  +  L +L  S C N     +  HL      L    
Sbjct: 871  ENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRE 930

Query: 203  CPVALMLPSLTGV-------CS-LTKLDLSDCGLGEAAIPSDIDNL-HSLKELYLNRNNF 253
            C    MLPS + +       CS LT LDL +C +  +    ++ N   +LKEL L+ N F
Sbjct: 931  CSRLDMLPSGSSLNFPQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKF 990

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
              LP S+    +L  LEL +CK L+++ +IP  L+ + A+GC  LV              
Sbjct: 991  CCLP-SLKNFTSLRLLELRNCKFLRNIVKIPHCLKRMDASGCELLV-------------- 1035

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
                      +  + +A  M R     Q +     K  ++   S+IPK+   Q   SSI+
Sbjct: 1036 ----------ISPDYIADMMFRN----QDLKLRNFKRELIVTYSEIPKFCNNQTTESSIS 1081

Query: 374  VTRPSYLYNVNKVV-GFAICCVFQVPKHS 401
                S+ +N + ++    +C VF+V   S
Sbjct: 1082 F---SFQHNSDMIIPALVVCVVFKVDADS 1107



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 12/303 (3%)

Query: 6   DLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LYL     +  +  S+  L+ L  L L+GC+NL  LP +   LK L  L LSGC K
Sbjct: 660 NLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIK 719

Query: 65  LKKFPQIVASMEDLSKLYLD---GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           LK+ P + AS  +L +L+L       I    +    L  L +L L  CK L RLP+S   
Sbjct: 720 LKEIPDLSAS-SNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLK 778

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGC 180
            +SLK LNLS C  L+ + D      +LE  D+ G  ++R    S+  +  L +L    C
Sbjct: 779 FESLKVLNLSYCQNLKEITD-FSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFC 837

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAAIPSDIDN 239
           ++     S       + L  ++C     LP     + SL +++L   G     +P+ I  
Sbjct: 838 HQLEELPSCLRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLK--GTAIRKLPTSIRY 895

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           L  L+ L L+   N ++LP+ I  L +L+EL+L +C RL  LP    +L F + + CS+L
Sbjct: 896 LIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPS-GSSLNFPQRSLCSNL 954

Query: 299 VTL 301
             L
Sbjct: 955 TIL 957



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 132/313 (42%), Gaps = 56/313 (17%)

Query: 21  PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSK 80
           P S  +  GL  L + G  N     +     K L+ ++LS    L++ P   A++ +L K
Sbjct: 606 PISFVVNGGLVGLVINGVSN-KHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAAL-NLEK 663

Query: 81  LYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           LYL     +  +  S+  L  L  L L  C+NL +LPSS   LKSL+ LNLSGC KL+ +
Sbjct: 664 LYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEI 723

Query: 140 PD------------------------TLGK-VESLEELDVSGTAI--RRPTSSIFLMKNL 172
           PD                         +G+ ++ L  LD+ G  I  R PTS +   ++L
Sbjct: 724 PDLSASSNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHL-KFESL 782

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSC---------------PVALM--------- 208
           + L  S C        + +     +     C                +AL          
Sbjct: 783 KVLNLSYCQNLKEITDFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFCHQLEE 842

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           LPS   + SL  L L++C   E  +P   +N+ SL+E+ L       LP SI  L+ LE 
Sbjct: 843 LPSCLRLKSLDSLSLTNCYKIE-QLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLEN 901

Query: 269 LELEDCKRLQSLP 281
           L L  C  L SLP
Sbjct: 902 LILSYCTNLISLP 914



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R +  ++  L  L+ L L+ C  LE LP  +  LK L +L+L+   K  + PE   +  
Sbjct: 816 LRTIHKSVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFDENMK 874

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSN--LKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            L E++L+GTAIR LP SI  L G  L N  L  C NL SLPS I+ L+SL+ +    CS
Sbjct: 875 SLREMNLKGTAIRKLPTSIRYLIG--LENLILSYCTNLISLPSEIHLLKSLKELDLRECS 932

Query: 788 KL 789
           +L
Sbjct: 933 RL 934



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 11/154 (7%)

Query: 651 WEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           W   +E PD    L+           ++ +  ++  L  LV L L GC+NLE+LP +   
Sbjct: 646 WRLLEETPDFSAALNLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLM 705

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASI--ELLSGNILSNLK 760
           LK L  LNLSG  K +E P++++S + L E+HL E   +R +  S     L   ++ +L+
Sbjct: 706 LKSLEVLNLSGCIKLKEIPDLSASSN-LKELHLRECYHLRIIHDSAVGRFLDKLVILDLE 764

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            CK L+ LP++     SL+++  S C  LK +T+
Sbjct: 765 GCKILERLPTSHLKFESLKVLNLSYCQNLKEITD 798



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 43/178 (24%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            +MK L ++ L GT+I ++P+SI  L GLE L L  C NL SLP  I  LK L+ L+L  C
Sbjct: 872  NMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLREC 931

Query: 63   SKLK--------KFPQ-------IVASMED------------------LSKLYLDGTSIA 89
            S+L          FPQ        +  +++                  L +L L G    
Sbjct: 932  SRLDMLPSGSSLNFPQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFC 991

Query: 90   EVPSSIELLPGLELLYLNECK---NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLG 144
             +P S++    L LL L  CK   N+V++P        LK ++ SGC  L   PD + 
Sbjct: 992  CLP-SLKNFTSLRLLELRNCKFLRNIVKIP------HCLKRMDASGCELLVISPDYIA 1042



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 5/122 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH-LEGT-A 740
           LV L L GCK LERLP +    + L  LNLS     +E  + + + +  LEI  L G  +
Sbjct: 758 LVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIASN--LEIFDLRGCFS 815

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +R +  S+  L   I   L  C  L+ LPS +  L+SL  +  + C K++ + E    ++
Sbjct: 816 LRTIHKSVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFDENMK 874

Query: 801 SL 802
           SL
Sbjct: 875 SL 876



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 682 GLVQLTLNGCKNLERLPRTI-SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
           GLV L +NG  N  + P  I    K L  ++LS      E P+ +++ +      L    
Sbjct: 614 GLVGLVINGVSN--KHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALNLEKLYLLSCKR 671

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           ++ +  S+  LS  +  +L+ C+NL+ LPS+   L+SL ++  SGC KLK + +
Sbjct: 672 LKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPD 725


>gi|147821821|emb|CAN63745.1| hypothetical protein VITISV_008823 [Vitis vinifera]
          Length = 477

 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 127/230 (55%), Gaps = 8/230 (3%)

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           ME L  L L GT I E+PSSIE L  L  L+L +C+NL  LPSSI  LK LK LNLSGC 
Sbjct: 4   MECLKSLNLSGTCIKELPSSIEFLKHLVDLWLVKCENLRSLPSSICRLKYLKELNLSGCS 63

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP---PASASWHL 191
            LE  P+ +  +E LE LD+SGT I+   SSI  + +L  L+ S C      P+S  W  
Sbjct: 64  NLETFPEIMEDMERLEWLDLSGTCIKELPSSIGYLNHLIYLHLSHCKNLRSLPSSIGWLK 123

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
            L    L  + CP  L+   +  + +L  L+  +   G A+  SD+  L  L+ L L++N
Sbjct: 124 LL--RKLNLNDCP-NLVTGDMENLINLGVLETQNMMDGVAS--SDLWCLSLLEVLDLSQN 178

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           N   +P +I+ L NL  L +  CK L+ + ++P +L+ + A+ C    TL
Sbjct: 179 NMRHIPTAITRLCNLRHLNISHCKMLEEILEVPSSLREINAHDCPIFGTL 228



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/202 (44%), Positives = 112/202 (55%), Gaps = 23/202 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+ L  L L GT I E+PSSIE L  L  L L  C+NL SLP +I  LK L+ L LS
Sbjct: 1   MEDMECLKSLNLSGTCIKELPSSIEFLKHLVDLWLVKCENLRSLPSSICRLKYLKELNLS 60

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GCS L+ FP+I+  ME L  L L GT I E+PSSI  L  L  L+L+ CKNL  LPSSI 
Sbjct: 61  GCSNLETFPEIMEDMERLEWLDLSGTCIKELPSSIGYLNHLIYLHLSHCKNLRSLPSSIG 120

Query: 121 GLKSLKTLNLSGCCKL-----ENVPDTLGKVES-----------------LEELDVSGTA 158
            LK L+ LNL+ C  L     EN+ + LG +E+                 LE LD+S   
Sbjct: 121 WLKLLRKLNLNDCPNLVTGDMENLIN-LGVLETQNMMDGVASSDLWCLSLLEVLDLSQNN 179

Query: 159 IRRPTSSIFLMKNLRSLYFSGC 180
           +R   ++I  + NLR L  S C
Sbjct: 180 MRHIPTAITRLCNLRHLNISHC 201



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 66/106 (62%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I+EL  +IE L  LV L L  C+NL  LP +I  LKYL  LNLSG S    FPEI  
Sbjct: 14  GTCIKELPSSIEFLKHLVDLWLVKCENLRSLPSSICRLKYLKELNLSGCSNLETFPEIME 73

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
             ++L  + L GT I+ LP+SI  L+  I  +L  CKNL+SLPS+I
Sbjct: 74  DMERLEWLDLSGTCIKELPSSIGYLNHLIYLHLSHCKNLRSLPSSI 119



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 45/73 (61%)

Query: 731 LLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           L  ++L GT I+ LP+SIE L   +   L  C+NL+SLPS+I  L+ L+ +  SGCS L+
Sbjct: 7   LKSLNLSGTCIKELPSSIEFLKHLVDLWLVKCENLRSLPSSICRLKYLKELNLSGCSNLE 66

Query: 791 NVTETLGKVESLE 803
              E +  +E LE
Sbjct: 67  TFPEIMEDMERLE 79


>gi|449464636|ref|XP_004150035.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1195

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 184/389 (47%), Gaps = 48/389 (12%)

Query: 26   LLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI-VASMEDLSKLYLD 84
             L  L +L L+GCK L  LP +    + L+ L LS C  LK+     +AS  +L    L 
Sbjct: 754  FLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIAS--NLEIFDLR 811

Query: 85   GT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
            G  S+  +  S+  L  L  L L+ C  L  LPS +  LKSL +L+L+ C K+E +P+  
Sbjct: 812  GCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFD 870

Query: 144  GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLHLPFNLLGKSS 202
              ++SL E+++ GTAIR+  +SI  +  L +L  S C N     +  HL      L    
Sbjct: 871  ENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLRE 930

Query: 203  CPVALMLPSLTGV-------CS-LTKLDLSDCGLGEAAIPSDIDNL-HSLKELYLNRNNF 253
            C    MLPS + +       CS LT LDL +C +  +    ++ N   +LKEL L+ N F
Sbjct: 931  CSRLDMLPSGSSLNFPQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKF 990

Query: 254  VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
              LP S+    +L  LEL +CK L+++ +IP  L+ + A+GC  LV              
Sbjct: 991  CCLP-SLKNFTSLRLLELRNCKFLRNIVKIPHCLKRMDASGCELLV-------------- 1035

Query: 314  IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
                      +  + +A  M R     Q +     K  ++   S+IPK+   Q   SSI+
Sbjct: 1036 ----------ISPDYIADMMFRN----QDLKLRNFKRELIVTYSEIPKFCNNQTTESSIS 1081

Query: 374  VTRPSYLYNVNKVV-GFAICCVFQVPKHS 401
                S+ +N + ++    +C VF+V   S
Sbjct: 1082 F---SFQHNSDMIIPALVVCVVFKVDADS 1107



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 148/303 (48%), Gaps = 12/303 (3%)

Query: 6   DLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LYL     +  +  S+  L+ L  L L+GC+NL  LP +   LK L  L LSGC K
Sbjct: 660 NLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIK 719

Query: 65  LKKFPQIVASMEDLSKLYLD---GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           LK+ P + AS  +L +L+L       I    +    L  L +L L  CK L RLP+S   
Sbjct: 720 LKEIPDLSAS-SNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLK 778

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGC 180
            +SLK LNLS C  L+ + D      +LE  D+ G  ++R    S+  +  L +L    C
Sbjct: 779 FESLKVLNLSYCQNLKEITD-FSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFC 837

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSL-TGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           ++     S       + L  ++C     LP     + SL +++L   G     +P+ I  
Sbjct: 838 HQLEELPSCLRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLK--GTAIRKLPTSIRY 895

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
           L  L+ L L+   N ++LP+ I  L +L+EL+L +C RL  LP    +L F + + CS+L
Sbjct: 896 LIGLENLILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPS-GSSLNFPQRSLCSNL 954

Query: 299 VTL 301
             L
Sbjct: 955 TIL 957



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 132/313 (42%), Gaps = 56/313 (17%)

Query: 21  PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSK 80
           P S  +  GL  L + G  N     +     K L+ ++LS    L++ P   A++ +L K
Sbjct: 606 PISFVVNGGLVGLVINGVSN-KHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAAL-NLEK 663

Query: 81  LYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           LYL     +  +  S+  L  L  L L  C+NL +LPSS   LKSL+ LNLSGC KL+ +
Sbjct: 664 LYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEI 723

Query: 140 PD------------------------TLGK-VESLEELDVSGTAI--RRPTSSIFLMKNL 172
           PD                         +G+ ++ L  LD+ G  I  R PTS +   ++L
Sbjct: 724 PDLSASSNLKELHLRECYHLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHL-KFESL 782

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSC---------------PVALM--------- 208
           + L  S C        + +     +     C                +AL          
Sbjct: 783 KVLNLSYCQNLKEITDFSIASNLEIFDLRGCFSLRTIHKSVGSLDQLIALKLDFCHQLEE 842

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           LPS   + SL  L L++C   E  +P   +N+ SL+E+ L       LP SI  L+ LE 
Sbjct: 843 LPSCLRLKSLDSLSLTNCYKIE-QLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLEN 901

Query: 269 LELEDCKRLQSLP 281
           L L  C  L SLP
Sbjct: 902 LILSYCTNLISLP 914



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R +  ++  L  L+ L L+ C  LE LP  +  LK L +L+L+   K  + PE   +  
Sbjct: 816 LRTIHKSVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFDENMK 874

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSN--LKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            L E++L+GTAIR LP SI  L G  L N  L  C NL SLPS I+ L+SL+ +    CS
Sbjct: 875 SLREMNLKGTAIRKLPTSIRYLIG--LENLILSYCTNLISLPSEIHLLKSLKELDLRECS 932

Query: 788 KL 789
           +L
Sbjct: 933 RL 934



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 11/154 (7%)

Query: 651 WEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           W   +E PD    L+           ++ +  ++  L  LV L L GC+NLE+LP +   
Sbjct: 646 WRLLEETPDFSAALNLEKLYLLSCKRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLM 705

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASI--ELLSGNILSNLK 760
           LK L  LNLSG  K +E P++++S + L E+HL E   +R +  S     L   ++ +L+
Sbjct: 706 LKSLEVLNLSGCIKLKEIPDLSASSN-LKELHLRECYHLRIIHDSAVGRFLDKLVILDLE 764

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            CK L+ LP++     SL+++  S C  LK +T+
Sbjct: 765 GCKILERLPTSHLKFESLKVLNLSYCQNLKEITD 798



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 43/178 (24%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            +MK L ++ L GT+I ++P+SI  L GLE L L  C NL SLP  I  LK L+ L+L  C
Sbjct: 872  NMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLREC 931

Query: 63   SKLK--------KFPQ-------IVASMED------------------LSKLYLDGTSIA 89
            S+L          FPQ        +  +++                  L +L L G    
Sbjct: 932  SRLDMLPSGSSLNFPQRSLCSNLTILDLQNCNISNSDFLENLSNFCTTLKELNLSGNKFC 991

Query: 90   EVPSSIELLPGLELLYLNECK---NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLG 144
             +P S++    L LL L  CK   N+V++P        LK ++ SGC  L   PD + 
Sbjct: 992  CLP-SLKNFTSLRLLELRNCKFLRNIVKIP------HCLKRMDASGCELLVISPDYIA 1042



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 5/122 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH-LEGT-A 740
           LV L L GCK LERLP +    + L  LNLS     +E  + + + +  LEI  L G  +
Sbjct: 758 LVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIASN--LEIFDLRGCFS 815

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +R +  S+  L   I   L  C  L+ LPS +  L+SL  +  + C K++ + E    ++
Sbjct: 816 LRTIHKSVGSLDQLIALKLDFCHQLEELPSCLR-LKSLDSLSLTNCYKIEQLPEFDENMK 874

Query: 801 SL 802
           SL
Sbjct: 875 SL 876



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 3/114 (2%)

Query: 682 GLVQLTLNGCKNLERLPRTI-SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
           GLV L +NG  N  + P  I    K L  ++LS      E P+ +++ +      L    
Sbjct: 614 GLVGLVINGVSN--KHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALNLEKLYLLSCKR 671

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           ++ +  S+  LS  +  +L+ C+NL+ LPS+   L+SL ++  SGC KLK + +
Sbjct: 672 LKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPD 725


>gi|297791251|ref|XP_002863510.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297309345|gb|EFH39769.1| hypothetical protein ARALYDRAFT_494460 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1188

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 176/363 (48%), Gaps = 26/363 (7%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            L+ ++LS  S L     ++ +  +L +L L+G TS+ E+P  ++ +  L  L L  C +L
Sbjct: 653  LKWVDLSHSSNLNSLMGLLKA-PNLLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSL 711

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
            + LP     + SLKTL LSGC KL+   D +   E LE L ++GT+I     +I  +  L
Sbjct: 712  LSLPKIT--MDSLKTLILSGCSKLQTF-DVIS--EHLESLYLNGTSINGLPPAIGNLHRL 766

Query: 173  RSLYFSGCNEPPASAS--WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
              L    C          W L      L  S C    M P +       ++ L D G   
Sbjct: 767  ILLNLKDCKNLATLPDCLWELK-SLQELKLSRCSELKMFPDVKKKVESLRVLLLD-GTSI 824

Query: 231  AAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
            A +P +I +   L+ L L+RN N  TL   +  + +L+ LEL+ CK L SLP +PPNLQ 
Sbjct: 825  AEMPGNIFDFSLLRRLCLSRNDNIRTLRFDMGQMFHLKWLELKWCKNLTSLPILPPNLQC 884

Query: 290  VRANGCSSLVTLFGALKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAV 343
            + A+GC+SL T+     L        S +   NC   L+ + KN + IS +++  +L + 
Sbjct: 885  LNAHGCTSLRTVASPQTLPTPTEQIHSTFIFTNC-HELEQVSKNAI-ISYVQKKSKLMSA 942

Query: 344  S--DPGHK----LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV 397
               +P       +   FPG +IP WF +Q+ GS +T+  P       K++G A+C V   
Sbjct: 943  DRYNPDFVFKSLIGTCFPGCEIPAWFNHQSLGSVLTLELPQDWNAAGKIIGIALCVVVSF 1002

Query: 398  PKH 400
             ++
Sbjct: 1003 KEY 1005



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 104/175 (59%), Gaps = 8/175 (4%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGCS 63
           +L  L L+G TS+ E+P  ++ +T L  L L+GC +L SLP +T+ SLK   TL LSGCS
Sbjct: 675 NLLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSLLSLPKITMDSLK---TLILSGCS 731

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           KL+ F  I    E L  LYL+GTSI  +P +I  L  L LL L +CKNL  LP  +  LK
Sbjct: 732 KLQTFDVI---SEHLESLYLNGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELK 788

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           SL+ L LS C +L+  PD   KVESL  L + GT+I     +IF    LR L  S
Sbjct: 789 SLQELKLSRCSELKMFPDVKKKVESLRVLLLDGTSIAEMPGNIFDFSLLRRLCLS 843



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 78/134 (58%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  LYL+GTSI  +P +I  L  L LL LK CKNL++LP  +  LK L+ L+LS CS+LK
Sbjct: 743 LESLYLNGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELKSLQELKLSRCSELK 802

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            FP +   +E L  L LDGTSIAE+P +I     L  L L+   N+  L   +  +  LK
Sbjct: 803 MFPDVKKKVESLRVLLLDGTSIAEMPGNIFDFSLLRRLCLSRNDNIRTLRFDMGQMFHLK 862

Query: 127 TLNLSGCCKLENVP 140
            L L  C  L ++P
Sbjct: 863 WLELKWCKNLTSLP 876



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 6/150 (4%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P+++++  +G T ++EL   ++ +  LV L L GC +L  LP+    +  L TL LSG S
Sbjct: 674 PNLLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSLLSLPKI--TMDSLKTLILSGCS 731

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           K + F  I+   + L  ++L GT+I GLP +I  L   IL NLKDCKNL +LP  +  L+
Sbjct: 732 KLQTFDVIS---EHLESLYLNGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELK 788

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           SL+ +  S CS+LK   +   KVESL V L
Sbjct: 789 SLQELKLSRCSELKMFPDVKKKVESLRVLL 818



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 67/152 (44%), Gaps = 27/152 (17%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +GT I  L  AI  L  L+ L L  CKNL  LP  +  LK L  L LS  S+ + FP++ 
Sbjct: 749 NGTSINGLPPAIGNLHRLILLNLKDCKNLATLPDCLWELKSLQELKLSRCSELKMFPDVK 808

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLS----------GNILS--------------NLKD 761
              + L  + L+GT+I  +P +I   S           NI +               LK 
Sbjct: 809 KKVESLRVLLLDGTSIAEMPGNIFDFSLLRRLCLSRNDNIRTLRFDMGQMFHLKWLELKW 868

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           CKNL SLP     L+ L      GC+ L+ V 
Sbjct: 869 CKNLTSLPILPPNLQCLN---AHGCTSLRTVA 897



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 731 LLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           LL ++LEG T+++ LP  ++ ++  +  NL+ C +L SLP     + SL+ +  SGCSKL
Sbjct: 676 LLRLNLEGCTSLKELPDEMKEMTNLVFLNLRGCTSLLSLPKIT--MDSLKTLILSGCSKL 733

Query: 790 KNVTETLGKVESLEVRLSSWN 810
           +        +ESL +  +S N
Sbjct: 734 QTFDVISEHLESLYLNGTSIN 754


>gi|227438159|gb|ACP30569.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1173

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 187/407 (45%), Gaps = 60/407 (14%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L+ L L G +S+  +PSSI   T L  L L  C  L +LP +I +   L+T +L
Sbjct: 677  LSTATNLTYLCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDL 736

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              CS L + P  + +  +L  L L G +S+ ++PSSI   P L+ LYL+ C +LV LPSS
Sbjct: 737  KDCSSLVELPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPNLQNLYLDYCSSLVNLPSS 796

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
            I    +L+ L+L  C  L  +P  +G   +L  LD+SG +++    SS+  +  L  L  
Sbjct: 797  IENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLHKLPKLTM 856

Query: 178  SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL--------DLSDCGLG 229
             GC++          LP N+       V+L    LTG  SL K          L   G  
Sbjct: 857  VGCSKLKV-------LPINI-----NMVSLRELDLTGCSSLKKFPEISTNIKHLHLIGTS 904

Query: 230  EAAIPSDIDNLHSLK---------------------ELYLNRNNFVTLPASISGLLNLEE 268
               +PS I +   L+                     EL++     + + + +  L +L  
Sbjct: 905  IEEVPSSIKSXXHLEHLRMSYSQNLKKSPHAXXTITELHITDTEXLDIGSWVKELSHLGR 964

Query: 269  LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL-KLCRSKYTIINCIDSLKLLRKN 327
            L L  CK L SLPQ+P +L  + A+ C SL  L  +L  L  + +  INC       + N
Sbjct: 965  LVLYGCKNLVSLPQLPGSLLDLDASNCESLERLDSSLHNLNSTTFRFINC------FKLN 1018

Query: 328  GLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
              AI +         +S    +L  V PG ++P  F Y+  G+ +TV
Sbjct: 1019 QEAIHL---------ISQTPCRLVAVLPGGEVPACFTYRAFGNFVTV 1056



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 44/327 (13%)

Query: 22  SSIELLTGLELLTLKGCKNLSSLPVTISSL-KCLRTLELSGCSKLKKFPQIVA----SME 76
           S+ E +T L+ L +    N    P +++S+ + +R LE +       FP        S +
Sbjct: 582 SAFERMTNLQFLRIGSGYNGLYFPQSLNSISRKIRLLEWN------DFPMTCLPSNFSPQ 635

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L KL + G+ + ++   I+ L  L+ + L   KNL ++P  ++   +L  L L GC  L
Sbjct: 636 FLVKLCMQGSKLKKLWDGIQPLRNLKWMDLRSSKNLKKIP-DLSTATNLTYLCLRGCSSL 694

Query: 137 ENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           EN+P ++G   +L  LD+S  T +    SSI+   NL++     C       S  + LP 
Sbjct: 695 ENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDC-------SSLVELPL 747

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFV 254
                          S+    +L  L+L  C      +PS I N  +L+ LYL+  ++ V
Sbjct: 748 ---------------SIGNAINLKSLNLGGCS-SLKDLPSSIGNAPNLQNLYLDYCSSLV 791

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGCSSLVTLFGAL-KLCR- 309
            LP+SI   +NL+ L+L+ C  L  LP       NL+++  +GCSSLV L  ++ KL + 
Sbjct: 792 NLPSSIENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLHKL 851

Query: 310 SKYTIINCIDSLKLLRKNGLAISMLRE 336
            K T++ C   LK+L  N   +S LRE
Sbjct: 852 PKLTMVGC-SKLKVLPININMVS-LRE 876



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 1/140 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD T +  L  +I     L    L  C +L  LP +I     L +LNL G S  ++ P 
Sbjct: 712 LSDCTRLVNLPSSIWNAINLQTFDLKDCSSLVELPLSIGNAINLKSLNLGGCSSLKDLPS 771

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  ++L+  +++  LP+SIE      + +LK C +L  LP  I    +LR + 
Sbjct: 772 SIGNAPNLQNLYLDYCSSLVNLPSSIENAINLQVLDLKYCSSLVELPIFIGNATNLRYLD 831

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGCS L  +  ++GK+  L
Sbjct: 832 LSGCSSLVELPSSVGKLHKL 851



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 2/145 (1%)

Query: 660 IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR 719
           +V++   G+ +++L   I+ L  L  + L   KNL+++P  +S    L+ L L G S   
Sbjct: 637 LVKLCMQGSKLKKLWDGIQPLRNLKWMDLRSSKNLKKIP-DLSTATNLTYLCLRGCSSLE 695

Query: 720 EFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
             P    +   LL + L + T +  LP+SI         +LKDC +L  LP +I    +L
Sbjct: 696 NLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSSLVELPLSIGNAINL 755

Query: 779 RMMYPSGCSKLKNVTETLGKVESLE 803
           + +   GCS LK++  ++G   +L+
Sbjct: 756 KSLNLGGCSSLKDLPSSIGNAPNLQ 780



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 4/86 (4%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  ++  L  L +LT+ GC  L+ LP  I+ +  L  L+L+G S  ++FPE
Sbjct: 832 LSGCSSLVELPSSVGKLHKLPKLTMVGCSKLKVLPININMVS-LRELDLTGCSSLKKFPE 890

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIE 749
           I+++   L   HL GT+I  +P+SI+
Sbjct: 891 ISTNIKHL---HLIGTSIEEVPSSIK 913



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           I +LS A  L +    L L GC +LE LP +I     L  L+LS  ++    P    +  
Sbjct: 674 IPDLSTATNLTY----LCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAI 729

Query: 730 QLLEIHLEG-TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPS 784
            L    L+  +++  LP SI    GN ++    NL  C +LK LPS+I    +L+ +Y  
Sbjct: 730 NLQTFDLKDCSSLVELPLSI----GNAINLKSLNLGGCSSLKDLPSSIGNAPNLQNLYLD 785

Query: 785 GCSKLKNVTETLGKVESLEV 804
            CS L N+  ++    +L+V
Sbjct: 786 YCSSLVNLPSSIENAINLQV 805


>gi|302125458|emb|CBI35545.3| unnamed protein product [Vitis vinifera]
          Length = 828

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 154/311 (49%), Gaps = 30/311 (9%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLEL-LTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           DLS ++  G  +  +PS  E    +EL +     +        +   + L  + LS    
Sbjct: 491 DLSYVHWHGYPLNSLPSKFETQKLVELNMPYSNIREFGE--GNMVRFEKLTAVILSHSKY 548

Query: 65  LKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           L K     +S  +L KL L+G TS+ E+  SI  L  L LL L ECK+L  LP SI  LK
Sbjct: 549 LIKVSNF-SSTPELEKLILEGCTSLREIDPSIGDLRRLSLLDLKECKSLGSLPDSICNLK 607

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           SLKTL LSGC +L  +P+ LG ++ L EL  + TA   P   I  ++ L+ L FSGC   
Sbjct: 608 SLKTLYLSGCSELNCLPEDLGNMQHLTELYANRTATGAPPPVIGRLRELQILSFSGCT-- 665

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                          G  + P    L  L     L +LDLSDC   +A IP D   L+SL
Sbjct: 666 ---------------GGRAHPSLFSLSGLF---LLRELDLSDCYWWDAEIPDDFWGLYSL 707

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
           + L L+ N+F  +P  I+ L  L+ L L  CKRL+ +P+ P +L+ + A+ C+SL T   
Sbjct: 708 ENLNLSGNHFTMVPRRITELSMLKVLVLGRCKRLEEIPEFPSSLEELDAHECASLQT--- 764

Query: 304 ALKLCRSKYTI 314
              L  S+Y +
Sbjct: 765 --SLASSRYVV 773



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 7/179 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +S  +L  L L+G TS+ E+  SI  L  L LL LK CK+L SLP +I +LK L+TL L
Sbjct: 555 FSSTPELEKLILEGCTSLREIDPSIGDLRRLSLLDLKECKSLGSLPDSICNLKSLKTLYL 614

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP--S 117
           SGCS+L   P+ + +M+ L++LY + T+    P  I  L  L++L  + C      P   
Sbjct: 615 SGCSELNCLPEDLGNMQHLTELYANRTATGAPPPVIGRLRELQILSFSGCTGGRAHPSLF 674

Query: 118 SINGLKSLKTLNLSGCCKLE-NVPDTLGKVESLEELDVSG---TAIRRPTSSIFLMKNL 172
           S++GL  L+ L+LS C   +  +PD    + SLE L++SG   T + R  + + ++K L
Sbjct: 675 SLSGLFLLRELDLSDCYWWDAEIPDDFWGLYSLENLNLSGNHFTMVPRRITELSMLKVL 733



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)

Query: 726 SSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
           SS  +L ++ LEG T++R +  SI  L    L +LK+CK+L SLP +I  L+SL+ +Y S
Sbjct: 556 SSTPELEKLILEGCTSLREIDPSIGDLRRLSLLDLKECKSLGSLPDSICNLKSLKTLYLS 615

Query: 785 GCSKLKNVTETLGKVESL 802
           GCS+L  + E LG ++ L
Sbjct: 616 GCSELNCLPEDLGNMQHL 633



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP--VTISSLKCLRTLE 58
           + +M+ L++LY + T+    P  I  L  L++L+  GC    + P   ++S L  LR L+
Sbjct: 627 LGNMQHLTELYANRTATGAPPPVIGRLRELQILSFSGCTGGRAHPSLFSLSGLFLLRELD 686

Query: 59  LSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
           LS C     + P     +  L  L L G     VP  I  L  L++L L  CK L  +P 
Sbjct: 687 LSDCYWWDAEIPDDFWGLYSLENLNLSGNHFTMVPRRITELSMLKVLVLGRCKRLEEIPE 746

Query: 118 SINGLKSLKTLNLSGCCKLE 137
             +   SL+ L+   C  L+
Sbjct: 747 FPS---SLEELDAHECASLQ 763



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 25/131 (19%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ +G T +RE+  +I  L  L  L L  CK+L  LP +I  LK L TL LSG S
Sbjct: 559 PELEKLILEGCTSLREIDPSIGDLRRLSLLDLKECKSLGSLPDSICNLKSLKTLYLSGCS 618

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
           +    PE   +   L E++   TA  G P                       P  I  LR
Sbjct: 619 ELNCLPEDLGNMQHLTELYANRTAT-GAP-----------------------PPVIGRLR 654

Query: 777 SLRMMYPSGCS 787
            L+++  SGC+
Sbjct: 655 ELQILSFSGCT 665


>gi|297791265|ref|XP_002863517.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309352|gb|EFH39776.1| hypothetical protein ARALYDRAFT_917001 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1124

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 188/423 (44%), Gaps = 108/423 (25%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGCS 63
           +L  L L+G +S+  +   +  +  L  L L+GC  L  LP + +SSL   RTL LSGCS
Sbjct: 475 NLLRLNLEGCSSLVCLSEEMRTMESLVFLNLRGCTGLRHLPDINLSSL---RTLILSGCS 531

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L++F  I    E+L  LYLDGT+I +                        LPS I  L+
Sbjct: 532 NLQEFRLI---SENLDYLYLDGTAIED------------------------LPSEIVKLQ 564

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGCNE 182
            L  LNL  C +L ++P+ +GK++SL+EL +SG +  +   ++   M+N R L   G + 
Sbjct: 565 KLILLNLKECRRLGSLPECIGKLKSLKELILSGCSNLKSFPNVEENMENFRVLLLDGTSI 624

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                     +P  L G +S                                     +  
Sbjct: 625 E--------EVPKILHGNNS-------------------------------------ISF 639

Query: 243 LKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           L+ L L+RN+ ++ L + IS L +L+ L+L+ CK+L+ L  +PPNLQ + A+GC SL T+
Sbjct: 640 LRRLSLSRNDVISSLGSDISQLYHLKWLDLKYCKKLRCLSTLPPNLQCLDAHGCISLETV 699

Query: 302 FGALKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF- 354
              L          S +   NC   L    KN +A  + R   + Q +SD  H  S VF 
Sbjct: 700 TSPLAFLMPMEDIHSMFIFTNCC-KLNDAAKNDIASHIRR---KCQLISDDHHNGSFVFR 755

Query: 355 -------PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
                  PG ++P WF +Q   S +    P +  + NK +G A+C +            F
Sbjct: 756 ALIGTCYPGYEVPPWFSHQAFDSVVERKLPPHWCD-NKFLGLALCAIVS----------F 804

Query: 408 HSY 410
           H Y
Sbjct: 805 HDY 807



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 113/221 (51%), Gaps = 9/221 (4%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  LYLDGT+I ++PS I  L  L LL LK C+ L SLP  I  LK L+ L LSGCS 
Sbjct: 541 ENLDYLYLDGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECIGKLKSLKELILSGCSN 600

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE---LLPGLELLYLNECKNLVRLPSSING 121
           LK FP +  +ME+   L LDGTSI EVP  +     +  L  L L+    +  L S I+ 
Sbjct: 601 LKSFPNVEENMENFRVLLLDGTSIEEVPKILHGNNSISFLRRLSLSRNDVISSLGSDISQ 660

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELD-VSGTAIRRPTSSIFLMKNLRSLY-FSG 179
           L  LK L+L  C KL  +      ++ L+    +S   +  P + +  M+++ S++ F+ 
Sbjct: 661 LYHLKWLDLKYCKKLRCLSTLPPNLQCLDAHGCISLETVTSPLAFLMPMEDIHSMFIFTN 720

Query: 180 CNEPPASA----SWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
           C +   +A    + H+     L+       + +  +L G C
Sbjct: 721 CCKLNDAAKNDIASHIRRKCQLISDDHHNGSFVFRALIGTC 761



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 72/134 (53%), Gaps = 5/134 (3%)

Query: 673 LSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLL 732
           LS  +  +  LV L L GC  L  LP     L  L TL LSG S  +EF  I+ + D L 
Sbjct: 490 LSEEMRTMESLVFLNLRGCTGLRHLPDI--NLSSLRTLILSGCSNLQEFRLISENLDYL- 546

Query: 733 EIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
             +L+GTAI  LP+ I  L   IL NLK+C+ L SLP  I  L+SL+ +  SGCS LK+ 
Sbjct: 547 --YLDGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECIGKLKSLKELILSGCSNLKSF 604

Query: 793 TETLGKVESLEVRL 806
                 +E+  V L
Sbjct: 605 PNVEENMENFRVLL 618



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT I +L   I  L  L+ L L  C+ L  LP  I  LK L  L LSG S  + FP + 
Sbjct: 549 DGTAIEDLPSEIVKLQKLILLNLKECRRLGSLPECIGKLKSLKELILSGCSNLKSFPNVE 608

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGN----ILSNLKDCKN--LKSLPSTINGLRSLR 779
            + +    + L+GT+I  +P   ++L GN     L  L   +N  + SL S I+ L  L+
Sbjct: 609 ENMENFRVLLLDGTSIEEVP---KILHGNNSISFLRRLSLSRNDVISSLGSDISQLYHLK 665

Query: 780 MMYPSGCSKLK 790
            +    C KL+
Sbjct: 666 WLDLKYCKKLR 676


>gi|51477385|gb|AAU04758.1| MRGH10 [Cucumis melo]
          Length = 944

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 152/287 (52%), Gaps = 26/287 (9%)

Query: 16  SITEVPSSIEL-LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           S  + PS +EL L G  +  L        L   + + + L+TL LS C  L+ FP+    
Sbjct: 647 STFQPPSLLELHLPGSNVERLWNGTQFQKLLSFVITCESLKTLVLSNCG-LEFFPEFGFP 705

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  L++L++DGTSI E+  SI+ L GL LL L  C  L  LP+ I  L SLKTL L+GC 
Sbjct: 706 MGYLTELHIDGTSINELSPSIKNLLGLVLLNLGNCIRLSSLPTEIGSLSSLKTLILNGCK 765

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L  +P +L  V+ LEELD+ GT+I    S+I  ++NLR L    C E   S  WH    
Sbjct: 766 NLHKLPPSLEYVKPLEELDIGGTSI----STIPFVENLRIL---NC-ERLKSIIWH---- 813

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF- 253
                 +S P            SL  L+LSDC L +  IPSD++   SL+ L L  N+F 
Sbjct: 814 ----SLASLPTEYF-------SSLKDLNLSDCNLVDEDIPSDLELFSSLEILDLGSNHFE 862

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            T+  +++ LL L+   L DC +L+ LP++P ++++V       ++T
Sbjct: 863 KTVRKALNNLLPLKYCTLNDCHKLKQLPKLPQSIRYVGGEKSLGMLT 909



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 89/164 (54%), Gaps = 12/164 (7%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L++L++DGTSI E+  SI+ L GL LL L  C  LSSLP  I SL  L+TL L+GC 
Sbjct: 706 MGYLTELHIDGTSINELSPSIKNLLGLVLLNLGNCIRLSSLPTEIGSLSSLKTLILNGCK 765

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV-----RLPSS 118
            L K P  +  ++ L +L + GTSI+ +P     +  L +L     K+++      LP+ 
Sbjct: 766 NLHKLPPSLEYVKPLEELDIGGTSISTIP----FVENLRILNCERLKSIIWHSLASLPTE 821

Query: 119 INGLKSLKTLNLSGCCKL-ENVPDTLGKVESLEELDVSGTAIRR 161
                SLK LNLS C  + E++P  L    SLE LD+      +
Sbjct: 822 Y--FSSLKDLNLSDCNLVDEDIPSDLELFSSLEILDLGSNHFEK 863



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLS---------TLNLSGLSKFREFPEITSSRDQLLE 733
           L++L L G  N+ERL       K LS         TL LS       FPE       L E
Sbjct: 654 LLELHLPG-SNVERLWNGTQFQKLLSFVITCESLKTLVLSNCG-LEFFPEFGFPMGYLTE 711

Query: 734 IHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           +H++GT+I  L  SI+ L G +L NL +C  L SLP+ I  L SL+ +  +GC  L  + 
Sbjct: 712 LHIDGTSINELSPSIKNLLGLVLLNLGNCIRLSSLPTEIGSLSSLKTLILNGCKNLHKLP 771

Query: 794 ETLGKVESLE 803
            +L  V+ LE
Sbjct: 772 PSLEYVKPLE 781


>gi|357474623|ref|XP_003607596.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508651|gb|AES89793.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1039

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 191/426 (44%), Gaps = 85/426 (19%)

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            +P LE+L L  C NL+ +P+SI  L SLK LNLSGC K+ N P  L K++S E +  S +
Sbjct: 651  VPNLEMLNLAGCVNLISIPNSIFVLTSLKYLNLSGCSKVFNYPKHLKKLDSSETVLHSQS 710

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
               + +S I     L SLY           + H  L           V+ +L SL     
Sbjct: 711  ---KTSSLILTTIGLHSLY----------QNAHKGL-----------VSRLLSSLPSFFF 746

Query: 218  LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            L +LD+S CGL +  IP  I  +  L  L L+ NNFVTLP S+  L  L  L+L+ CK+L
Sbjct: 747  LRELDISFCGLSQ--IPDAIGCIRWLGRLVLSGNNFVTLP-SLRELSKLVYLDLQYCKQL 803

Query: 278  QSLPQIP-PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE 336
              LP++P P+   V  N              C     I NC +  +    + + +S L +
Sbjct: 804  NFLPELPLPHSSTVGQN--------------CVVGLYIFNCPELGERGHCSRMTLSWLIQ 849

Query: 337  YLELQAVSDPGH---KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICC 393
            +L     S        + IV PGS+IP+W   Q+ G+S+++   S +++    +G   C 
Sbjct: 850  FLHANQESFACFLETDIGIVIPGSEIPRWLNNQSLGNSMSINLSSIVHD-KDFIGLVACV 908

Query: 394  VFQVPKHSTGTYLFHSYP---AHELECSM------DGSGEGHYIYF------RGKFGHVV 438
            VF V            YP    +ELE ++      D +  G+   F              
Sbjct: 909  VFSVKL---------DYPNITTNELENNICISLDEDHTRTGYGFNFSCPVICYADLFTPE 959

Query: 439  SDHLWLLFLPRHGHNW-QFESNLIRLSFRSISDPTW---------KVKRCGFHPIYMHEV 488
            SDH WLL+LP     W +   +     F  I+  T+         +VK+CG+  I+  + 
Sbjct: 960  SDHTWLLYLP-----WDRLNPDKTFRGFDHITMTTFIDEREGLHGEVKKCGYRCIFKQDQ 1014

Query: 489  EEFDET 494
            ++F+ T
Sbjct: 1015 QQFNST 1020



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 5/129 (3%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+L L GC NL S+P +I  L  L+ L LSGCSK+  +P+ +  + D S+  L   S  
Sbjct: 654 LEMLNLAGCVNLISIPNSIFVLTSLKYLNLSGCSKVFNYPKHLKKL-DSSETVLHSQS-- 710

Query: 90  EVPSSIELLPGLELLYLNECKNLV-RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
           +  S I    GL  LY N  K LV RL SS+     L+ L++S  C L  +PD +G +  
Sbjct: 711 KTSSLILTTIGLHSLYQNAHKGLVSRLLSSLPSFFFLRELDIS-FCGLSQIPDAIGCIRW 769

Query: 149 LEELDVSGT 157
           L  L +SG 
Sbjct: 770 LGRLVLSGN 778



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)

Query: 623 GCM--SCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELL 680
           GC+  S   + GR+ V+  S ++    SRLW    E  D V + +   +++ + LA    
Sbjct: 491 GCVMHSLLVELGRKIVQENSTKDLKKWSRLW--FPEHFDNVMLENMEKNVQAIVLAYHSP 548

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLS-TLN-LSGLSKFREFPEITSSR-------DQL 731
             + +       N+  +   I    Y S +LN LS   ++ E+     +        +QL
Sbjct: 549 RQIKKFAAETLSNMNHIRLLILENTYFSGSLNYLSNELRYVEWNRYPFTYLPKSFQPNQL 608

Query: 732 LEIHLEGTAIRGLPASIELL----------SGNILS-------------NLKDCKNLKSL 768
           +E+HL  ++I+ L    + L          S N++              NL  C NL S+
Sbjct: 609 VELHLSYSSIKQLWKGKKYLPNLRIMDLMHSRNLIKLPDFGEVPNLEMLNLAGCVNLISI 668

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
           P++I  L SL+ +  SGCSK+ N  + L K++S E  L S ++
Sbjct: 669 PNSIFVLTSLKYLNLSGCSKVFNYPKHLKKLDSSETVLHSQSK 711


>gi|168033675|ref|XP_001769340.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679446|gb|EDQ65894.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 524

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 114/321 (35%), Positives = 173/321 (53%), Gaps = 32/321 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L +L L G +S+T +P+ +  L+ L++L L GC NL SLP  +++L  L  L+L
Sbjct: 110 LTNLSFLEELVLSGCSSLTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFLTILDL 169

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC  L   P  +A++  L  L L G +S+  +P+ +  L  L+ LYL  C +L  LP+ 
Sbjct: 170 SGCFSLISLPNELANLSSLEVLVLSGCSSLTSLPNELANLSSLKALYLIGCSSLTSLPNE 229

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLY 176
           +  L SL+ L LSGC  L ++ + L  + SL  L++SG  + I  P      + NL SL 
Sbjct: 230 LANLSSLEELVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPNE----LANLYSLK 285

Query: 177 F---SGCNEPPASASWHLHLPFNLLGKSSCPVALM--------LPS-LTGVCSLTKLDLS 224
           F   SGC       S    LP  L+  SS    +M        LP+ LT + SL +L LS
Sbjct: 286 FLVLSGC-------SSLTSLPNELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVLS 338

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
            C     ++P+++ NL SLK L LN  ++ ++LP  ++ L +L  L+L  C  L+SLP  
Sbjct: 339 GCS-SLISLPNELTNLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCSSLKSLPNE 397

Query: 284 PPNLQFV-RAN--GCSSLVTL 301
             NL ++ R N  GCS L +L
Sbjct: 398 LANLSYLTRLNLSGCSCLTSL 418



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 181/344 (52%), Gaps = 34/344 (9%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L+ L L G  S+  +P+ +  L+ LE+L L GC +L+SLP  +++L  L+ L L
Sbjct: 158 LANLSFLTILDLSGCFSLISLPNELANLSSLEVLVLSGCSSLTSLPNELANLSSLKALYL 217

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS L   P  +A++  L +L L G +S+  + + +  L  L  L L+ C +L+ LP+ 
Sbjct: 218 IGCSSLTSLPNELANLSSLEELVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPNE 277

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  L SLK L LSGC  L ++P+ L  + SLEEL +SG +++    + +  + +L  L  
Sbjct: 278 LANLYSLKFLVLSGCSSLTSLPNELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVL 337

Query: 178 SGCNEPPASASWHLHLPFNLLGKSS--------CPVALMLPS-LTGVCSLTKLDLSDCGL 228
           SGC       S  + LP  L   SS        C   + LP+ LT + SLT+LDL+ C  
Sbjct: 338 SGC-------SSLISLPNELTNLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCS- 389

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
              ++P+++ NL  L  L L+  + +T LP  ++ L  L  L+L  C  L SLP    NL
Sbjct: 390 SLKSLPNELANLSYLTRLNLSGCSCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNL 449

Query: 288 QFVRA---NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG 328
            F+     +GCSSL +L   L            + SLK+L  NG
Sbjct: 450 SFLTTLDLSGCSSLTSLPNELA----------NLSSLKMLDLNG 483



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 178/358 (49%), Gaps = 58/358 (16%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L +L L D  S+T +P+ +  L+ L +L L GC +L+SLP  +++L  L  L+L
Sbjct: 14  LVNLSSLEELVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPNELANLSSLTILDL 73

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-------------------------TSIAEVPSS 94
           SGCS L      +A++  L+ L L G                         +S+  +P+ 
Sbjct: 74  SGCSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVLSGCSSLTSLPNE 133

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           +  L  L++L LN C NL+ LP+ +  L  L  L+LSGC  L ++P+ L  + SLE L +
Sbjct: 134 LVNLSSLKMLDLNGCSNLISLPNELANLSFLTILDLSGCFSLISLPNELANLSSLEVLVL 193

Query: 155 SG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP------------------- 194
           SG +++    + +  + +L++LY  GC+   +  +   +L                    
Sbjct: 194 SGCSSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANLSSLEELVLSGCSSLTSLSNE 253

Query: 195 -FNL-----LGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
             NL     L  S C   + LP+ L  + SL  L LS C     ++P+++ NL SL+EL 
Sbjct: 254 LANLSSLRRLNLSGCFSLISLPNELANLYSLKFLVLSGCS-SLTSLPNELVNLSSLEELI 312

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           ++  ++  TLP  ++ L +LEEL L  C  L SLP    NL  ++    NGCSSL++L
Sbjct: 313 MSGFSSLTTLPNELTNLSSLEELVLSGCSSLISLPNELTNLSSLKMLDLNGCSSLISL 370



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 24/317 (7%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L  LYL G +S+T +P+ +  L+ LE L L GC +L+SL   +++L  LR L L
Sbjct: 206 LANLSSLKALYLIGCSSLTSLPNELANLSSLEELVLSGCSSLTSLSNELANLSSLRRLNL 265

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC  L   P  +A++  L  L L G +S+  +P+ +  L  LE L ++   +L  LP+ 
Sbjct: 266 SGCFSLISLPNELANLYSLKFLVLSGCSSLTSLPNELVNLSSLEELIMSGFSSLTTLPNE 325

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLY 176
           +  L SL+ L LSGC  L ++P+ L  + SL+ LD++G +  I  P      + NL SL 
Sbjct: 326 LTNLSSLEELVLSGCSSLISLPNELTNLSSLKMLDLNGCSSLISLPNE----LTNLSSLT 381

Query: 177 ---FSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGL 228
               +GC+     P   A+       NL G   C     LP+ L  +  LT+LDLS C  
Sbjct: 382 RLDLNGCSSLKSLPNELANLSYLTRLNLSG---CSCLTSLPNELANLSFLTRLDLSGCS- 437

Query: 229 GEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
              ++P+++ NL  L  L L+  ++  +LP  ++ L +L+ L+L  C  L  LP    NL
Sbjct: 438 SLTSLPNELTNLSFLTTLDLSGCSSLTSLPNELANLSSLKMLDLNGCSSLIILPNELANL 497

Query: 288 QFV-RAN--GCSSLVTL 301
            F+ R N  GC SL++L
Sbjct: 498 SFLTRLNLSGCLSLISL 514



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 154/293 (52%), Gaps = 29/293 (9%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  L+ LE L L  C +L+SLP  +++L  L  L+LSGCS L   P  +A+
Sbjct: 5   SSLTSLPNELVNLSSLEELVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPNELAN 64

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L L G +S+  + + +  L  L  L L+ C +L+ LP+ +  L  L+ L LSGC
Sbjct: 65  LSSLTILDLSGCSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVLSGC 124

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             L ++P+ L  + SL+ LD++G +     + I L   L +L F                
Sbjct: 125 SSLTSLPNELVNLSSLKMLDLNGCS-----NLISLPNELANLSF---------------- 163

Query: 194 PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRN 251
              +L  S C   + LP+ L  + SL  L LS C     ++P+++ NL SLK LYL   +
Sbjct: 164 -LTILDLSGCFSLISLPNELANLSSLEVLVLSGCS-SLTSLPNELANLSSLKALYLIGCS 221

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR---ANGCSSLVTL 301
           +  +LP  ++ L +LEEL L  C  L SL     NL  +R    +GC SL++L
Sbjct: 222 SLTSLPNELANLSSLEELVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISL 274



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 89/151 (58%), Gaps = 2/151 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L L+G +S+  +P+ +  L+ L  L L GC  L+SLP  +++L  L  L+L
Sbjct: 374 LTNLSSLTRLDLNGCSSLKSLPNELANLSYLTRLNLSGCSCLTSLPNELANLSFLTRLDL 433

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGCS L   P  + ++  L+ L L G +S+  +P+ +  L  L++L LN C +L+ LP+ 
Sbjct: 434 SGCSSLTSLPNELTNLSFLTTLDLSGCSSLTSLPNELANLSSLKMLDLNGCSSLIILPNE 493

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           +  L  L  LNLSGC  L ++P+ L  + SL
Sbjct: 494 LANLSFLTRLNLSGCLSLISLPNELANLSSL 524



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L +L LNGC +L+ LP  ++ L YL+ LNLSG S     P   ++   L  + L G 
Sbjct: 377 LSSLTRLDLNGCSSLKSLPNELANLSYLTRLNLSGCSCLTSLPNELANLSFLTRLDLSGC 436

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           +++  LP  +  LS     +L  C +L SLP+ +  L SL+M+  +GCS L
Sbjct: 437 SSLTSLPNELTNLSFLTTLDLSGCSSLTSLPNELANLSSLKMLDLNGCSSL 487



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L  L L+GC +L  L   ++ L  L+TL+LSG S     P   ++   L E+ L G 
Sbjct: 65  LSSLTILDLSGCSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVLSGC 124

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  LS   + +L  C NL SLP+ +  L  L ++  SGC  L ++   L  
Sbjct: 125 SSLTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFLTILDLSGCFSLISLPNELAN 184

Query: 799 VESLEV 804
           + SLEV
Sbjct: 185 LSSLEV 190



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 16/197 (8%)

Query: 609 SQQGQFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGT 668
           S   + V + S++   MS +            P E  N S L E          VLS  +
Sbjct: 297 SLPNELVNLSSLEELIMSGFSSLTTL------PNELTNLSSLEE---------LVLSGCS 341

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
            +  L   +  L  L  L LNGC +L  LP  ++ L  L+ L+L+G S  +  P   ++ 
Sbjct: 342 SLISLPNELTNLSSLKMLDLNGCSSLISLPNELTNLSSLTRLDLNGCSSLKSLPNELANL 401

Query: 729 DQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             L  ++L G + +  LP  +  LS     +L  C +L SLP+ +  L  L  +  SGCS
Sbjct: 402 SYLTRLNLSGCSCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNLSFLTTLDLSGCS 461

Query: 788 KLKNVTETLGKVESLEV 804
            L ++   L  + SL++
Sbjct: 462 SLTSLPNELANLSSLKM 478



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L   ++E  ++  +    LS  + +  L   +  L  L +L L+GC +L  LP  + 
Sbjct: 76  CSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVLSGCSSLTSLPNELV 135

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKD 761
            L  L  L+L+G S     P   ++   L  + L G  ++  LP  +  LS   +  L  
Sbjct: 136 NLSSLKMLDLNGCSNLISLPNELANLSFLTILDLSGCFSLISLPNELANLSSLEVLVLSG 195

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           C +L SLP+ +  L SL+ +Y  GCS L ++   L  + SLE
Sbjct: 196 CSSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANLSSLE 237



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 620 VDSGCMSCYKKWGRQTVRRQSPQ--EPGNCSRLWEEADEFPDI--VQVLSDGTDIRELSL 675
           V SGC S       + V   S +  +   CS L    +E  ++  + +L        +SL
Sbjct: 120 VLSGCSS-LTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFLTILDLSGCFSLISL 178

Query: 676 AIEL--LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE 733
             EL  L  L  L L+GC +L  LP  ++ L  L  L L G S     P   ++   L E
Sbjct: 179 PNELANLSSLEVLVLSGCSSLTSLPNELANLSSLKALYLIGCSSLTSLPNELANLSSLEE 238

Query: 734 IHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           + L G +++  L   +  LS     NL  C +L SLP+ +  L SL+ +  SGCS L ++
Sbjct: 239 LVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPNELANLYSLKFLVLSGCSSLTSL 298

Query: 793 TETLGKVESLE 803
              L  + SLE
Sbjct: 299 PNELVNLSSLE 309



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 5/161 (3%)

Query: 647 CSRLWEEADEFPDIVQ----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++      VLS  + +  LS  +  L  L +L L+GC +L  LP  ++
Sbjct: 220 CSSLTSLPNELANLSSLEELVLSGCSSLTSLSNELANLSSLRRLNLSGCFSLISLPNELA 279

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L  L LSG S     P    +   L E+ + G +++  LP  +  LS      L  
Sbjct: 280 NLYSLKFLVLSGCSSLTSLPNELVNLSSLEELIMSGFSSLTTLPNELTNLSSLEELVLSG 339

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           C +L SLP+ +  L SL+M+  +GCS L ++   L  + SL
Sbjct: 340 CSSLISLPNELTNLSSLKMLDLNGCSSLISLPNELTNLSSL 380



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 10/165 (6%)

Query: 641 PQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P E  N S L E          VLSD   +  L   +  L  L  L L+GC +L  LP  
Sbjct: 11  PNELVNLSSLEE---------LVLSDCLSLTSLPNELANLSSLTILDLSGCSSLTSLPNE 61

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           ++ L  L+ L+LSG S         ++   L  + L G +++  LP  +  LS      L
Sbjct: 62  LANLSSLTILDLSGCSSLTSLSNELANLSSLTTLDLSGCSSLISLPNELTNLSFLEELVL 121

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             C +L SLP+ +  L SL+M+  +GCS L ++   L  +  L +
Sbjct: 122 SGCSSLTSLPNELVNLSSLKMLDLNGCSNLISLPNELANLSFLTI 166



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L L+GC  L  LP  ++ L +L+ L+LSG S     P   ++   L  + L G +++
Sbjct: 404 LTRLNLSGCSCLTSLPNELANLSFLTRLDLSGCSSLTSLPNELTNLSFLTTLDLSGCSSL 463

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP  +  LS   + +L  C +L  LP+ +  L  L  +  SGC  L ++   L  + S
Sbjct: 464 TSLPNELANLSSLKMLDLNGCSSLIILPNELANLSFLTRLNLSGCLSLISLPNELANLSS 523

Query: 802 L 802
           L
Sbjct: 524 L 524


>gi|356514965|ref|XP_003526172.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1518

 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 183/400 (45%), Gaps = 35/400 (8%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L  L L  +++ ++P   E L  L  L L+GC+ L  +  +I  L  L  L L  C  L 
Sbjct: 930  LRRLNLSLSALVKLPDFAEDLN-LRQLNLEGCEQLRQIHPSIGHLTKLEVLNLKDCKSLV 988

Query: 67   KFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            K P     + +L +L L+G   + ++  SI  L  L  L L +CK+L  LP++I  L SL
Sbjct: 989  KLPDFAEDL-NLRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCKSLESLPNNILRLSSL 1047

Query: 126  KTLNLSGCCKLENVPDTLGK--VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            + L+L GC KL N+  +  +     L++L + G A  R + SIF      S +  G   P
Sbjct: 1048 QYLSLFGCSKLYNIRSSEEQRGAGHLKKLRI-GEAPSR-SQSIF------SFFKKGLPWP 1099

Query: 184  PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
              +    L             V  +LPSL     + +LDLS C L    IP    N   L
Sbjct: 1100 SVAFDKSLE------DAHKDSVRCLLPSLPIFPCMRELDLSFCNL--LKIPDAFVNFQCL 1151

Query: 244  KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
            +ELYL  NNF TLP S+  L  L  L L+ CKRL+ LP++P        N  +     +G
Sbjct: 1152 EELYLMGNNFETLP-SLKELSKLLHLNLQHCKRLKYLPELPSRTDLFWWNWTTVDDYEYG 1210

Query: 304  ALKLCRSKYTIINCIDSLKLLR--KNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPK 361
                      I NC +  +  R   N  +  M   + +L  +  P   +S + PGS+IP 
Sbjct: 1211 L------GLNIFNCPELAERDRCPNNCFSWMMQIAHPDLLPLVPP---ISSIIPGSEIPS 1261

Query: 362  WFMYQN--EGSSITVTRPSYLYNVNKVVGFAICCVFQVPK 399
            WF  Q+   G+ I + R  ++ +    +G A+  +F V K
Sbjct: 1262 WFEKQHLGMGNVINIGRSHFMQHYKNWIGLALSVIFVVHK 1301



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 5/149 (3%)

Query: 646  NCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
            N   LW+     P + ++ LS    ++    A +L   L QL L GC+ L ++  +I  L
Sbjct: 916  NIQHLWDSTQPIPKLRRLNLSLSALVKLPDFAEDL--NLRQLNLEGCEQLRQIHPSIGHL 973

Query: 705  KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCK 763
              L  LNL       + P+     + L E++LEG   +R +  SI  L+  +  NLKDCK
Sbjct: 974  TKLEVLNLKDCKSLVKLPDFAEDLN-LRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCK 1032

Query: 764  NLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            +L+SLP+ I  L SL+ +   GCSKL N+
Sbjct: 1033 SLESLPNNILRLSSLQYLSLFGCSKLYNI 1061



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 26/169 (15%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L +L L+G   + ++  SI  LT L  L LK CK+L SLP  I  L  L+ L L GCSK
Sbjct: 998  NLRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCKSLESLPNNILRLSSLQYLSLFGCSK 1057

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPS----------------SIELLPGLELLYLNE 108
            L     I +S E     +L    I E PS                S+     LE    + 
Sbjct: 1058 LY---NIRSSEEQRGAGHLKKLRIGEAPSRSQSIFSFFKKGLPWPSVAFDKSLE----DA 1110

Query: 109  CKNLVR-LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             K+ VR L  S+     ++ L+LS  C L  +PD     + LEEL + G
Sbjct: 1111 HKDSVRCLLPSLPIFPCMRELDLS-FCNLLKIPDAFVNFQCLEELYLMG 1158



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 23/189 (12%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL-SLAIE----LLFGLVQL 686
           G+  VR +SP+EP N SRLW    ++ D+ +VLS+    + L ++ +E    + F     
Sbjct: 797 GKCIVREKSPKEPRNWSRLW----DWKDLYEVLSNNMKAKNLEAIVVEDKTWMFFETTMR 852

Query: 687 T--LNGCKNLERL-----PRTISALKYLSTLNLSGL----SKFREFPEITSSRDQLLEIH 735
              L+  KNL+ L      +    L Y+S   L  L      F   P+     + L+E+ 
Sbjct: 853 VDALSKMKNLKLLMFPEYTKFSGNLNYVSNNKLGYLIWPYYPFNFLPQCFQPHN-LIELD 911

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L  + I+ L  S + +      NL     L  LP     L +LR +   GC +L+ +  +
Sbjct: 912 LSRSNIQHLWDSTQPIPKLRRLNL-SLSALVKLPDFAEDL-NLRQLNLEGCEQLRQIHPS 969

Query: 796 LGKVESLEV 804
           +G +  LEV
Sbjct: 970 IGHLTKLEV 978


>gi|108738478|gb|ABG00772.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738524|gb|ABG00795.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L S++ L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSSMRILNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPWKLEQLNLENCFSL 526



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|357480743|ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1128

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 187/429 (43%), Gaps = 40/429 (9%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L  +G     +PS+I+L   +EL       N+  L   I  L CL+ ++LS    L+  P
Sbjct: 569 LSWNGFPFDSLPSNIQLHDLVELNMPDS--NIKQLWEGIQRLPCLKRMDLSNSKNLRTTP 626

Query: 70  QIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLP-SSINGLKSLKT 127
                +++L ++   G  ++ +V  S+ LL  L  L L  C NL  L   S++ + SL+ 
Sbjct: 627 SF-EGIQNLERIDFTGCINLLQVHPSVGLLTELVFLSLQNCTNLTCLDFGSVSRVWSLRV 685

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEP-PA 185
           L LSGC  L N PD      +LE LD+     + +   SI  +  LR L    C +  P 
Sbjct: 686 LRLSGCIGLRNTPD-FTVAANLEYLDMERCINLSKIDKSIGTLTKLRFLSLRHCTKLFPI 744

Query: 186 SASWHLHLPFNLLGKSSC------PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           S  +        L    C      P+   + S + + SL  LDLS C +  + +P  I  
Sbjct: 745 SNIFDNMTSLTTLDLCECWNFTTLPLPTTVNSPSPLESLIFLDLSFCNI--SVLPDSIGK 802

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           L SL+ L L  N+F TLP++   L NL  L L  C RL+ LP++P      ++    S+ 
Sbjct: 803 LKSLERLNLQGNHFTTLPSTFKRLANLAYLNLSHCHRLKRLPKLP-----TKSGQSDSVG 857

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRK------NGLAISMLREYLELQA-------VSDP 346
             F      R   + +   D  KL ++       G+    L+   +          +  P
Sbjct: 858 RYFKTTSGSRDHRSGLYIYDCPKLTKRLFSCEDPGVPFKWLKRLFKEPRHFRCGFDIVLP 917

Query: 347 GHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV---PKHST 402
            H+  I   G+  IP+WF Y+ E  SI   + S ++     VGFA C  FQ+   P  S 
Sbjct: 918 LHRKHIDLHGNPLIPQWFDYKFEKGSIITIKNSNMH--VDWVGFAFCVAFQIDNRPAVSG 975

Query: 403 GTYLFHSYP 411
             Y FHS P
Sbjct: 976 SPYRFHSSP 984



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 21/186 (11%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEAD-------EFPDIVQVLS-------DGTDIRELSLAI 677
           GRQ V+ Q P EP   SRLW   D       E    ++V +       DG++  +L    
Sbjct: 479 GRQIVQGQHPNEPEFWSRLWLYRDFHRVMMTEMKAPIEVKAIVLDQKEDGSEFNKLRAED 538

Query: 678 ELLFGLVQLTLNGCKNLERLPRTIS-ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
               G ++L +   KN    P  +S +L YLS    +G   F   P      D L+E+++
Sbjct: 539 LSKLGHLKLLILCHKNFSGEPIFLSNSLCYLS---WNGFP-FDSLPSNIQLHD-LVELNM 593

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             + I+ L   I+ L      +L + KNL++ PS   G+++L  +  +GC  L  V  ++
Sbjct: 594 PDSNIKQLWEGIQRLPCLKRMDLSNSKNLRTTPS-FEGIQNLERIDFTGCINLLQVHPSV 652

Query: 797 GKVESL 802
           G +  L
Sbjct: 653 GLLTEL 658


>gi|255578414|ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530425|gb|EEF32312.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 204/466 (43%), Gaps = 70/466 (15%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            + L  L +  + I E     +    L+ + L+ C+ L+  P   S++  L  L L GCSK
Sbjct: 592  RKLVGLNMHRSYIREFGEEFKNYNLLKFIDLRDCEFLTGTP-DFSAIPNLERLNLGGCSK 650

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L                        EV  S+  L  LE L    C NL  LPS+   L+S
Sbjct: 651  L-----------------------VEVHQSVGNLAKLEFLSFEFCFNLKNLPSTFK-LRS 686

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L+TL L+GC KLE  P+ +G+++ LE+L ++ TAI+   SSI  +  L+ L  + C    
Sbjct: 687  LRTLLLTGCQKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCK--- 743

Query: 185  ASASWHLHLPFNL-----LGKSSCPVALMLP------SLTGVCSLTKLDLSDCGLGEAAI 233
             + ++  H  + L     L    C +    P      S  G      LDL +C L +   
Sbjct: 744  -NLTYLPHGIYKLEQLKCLFLEGCSMLHEFPANPNGHSSLGFPKFRCLDLRNCNLPDITF 802

Query: 234  PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
              + +    LK+L L+ N+FV+LP       NL  L+L  C ++Q +P++P  ++ V A 
Sbjct: 803  LKEHNCFPMLKDLDLSGNDFVSLPPYFHLFNNLRSLKLSKCMKVQEIPELPLYIKRVEAR 862

Query: 294  GCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR-------EYLELQAVSDP 346
             C SL       +L R    I  C +  +  R + +  S          ++LE   +S  
Sbjct: 863  DCESLERF---PQLAR----IFKCNEEDRPNRLHDIDFSNCHKLAANESKFLENAVLSKK 915

Query: 347  GH---KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTG 403
                 ++ I  PGS+IPKWF Y++E  S++   PS      ++    +C +  +    T 
Sbjct: 916  FRQDLRIEIFLPGSEIPKWFSYRSEEDSLSFQLPS--RECERIRALILCAILSIKDGETV 973

Query: 404  TYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPR 449
                  +        ++G    + I F  +F  + S+H+WL +LPR
Sbjct: 974  NISRQVF--------INGQ---NVIMFSRQFFSLESNHVWLYYLPR 1008



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 20/207 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L  L L  T+I  +PSSI  LTGL++LTL  CKNL+ LP  I  L+ L+ L L 
Sbjct: 705 VGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYKLEQLKCLFLE 764

Query: 61  GCSKLKKFPQIVASME----------DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           GCS L +FP                 DL    L   +  +  +   +L  L+L       
Sbjct: 765 GCSMLHEFPANPNGHSSLGFPKFRCLDLRNCNLPDITFLKEHNCFPMLKDLDL----SGN 820

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM- 169
           + V LP   +   +L++L LS C K++ +P+    ++ +E  D          + IF   
Sbjct: 821 DFVSLPPYFHLFNNLRSLKLSKCMKVQEIPELPLYIKRVEARDCESLERFPQLARIFKCN 880

Query: 170 -----KNLRSLYFSGCNEPPASASWHL 191
                  L  + FS C++  A+ S  L
Sbjct: 881 EEDRPNRLHDIDFSNCHKLAANESKFL 907



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+   C NL+ LP T       + L L+G  K   FPEI      L ++ L  TAI+GLP
Sbjct: 667 LSFEFCFNLKNLPSTFKLRSLRTLL-LTGCQKLEAFPEIVGEIKWLEKLSLTKTAIKGLP 725

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           +SI  L+G  +  L  CKNL  LP  I  L  L+ ++  GCS L
Sbjct: 726 SSIANLTGLKVLTLTYCKNLTYLPHGIYKLEQLKCLFLEGCSML 769



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 79/187 (42%), Gaps = 15/187 (8%)

Query: 652 EEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           ++ + FP+IV  +          T I+ L  +I  L GL  LTL  CKNL  LP  I  L
Sbjct: 696 QKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKVLTLTYCKNLTYLPHGIYKL 755

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR--GLPASIELLSGNILSNLKDC 762
           + L  L L G S   EFP   +    L         +R   LP    L   N    LKD 
Sbjct: 756 EQLKCLFLEGCSMLHEFPANPNGHSSLGFPKFRCLDLRNCNLPDITFLKEHNCFPMLKDL 815

Query: 763 ----KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR-LSSWNR-PKMQN 816
                +  SLP   +   +LR +  S C K++ + E    ++ +E R   S  R P++  
Sbjct: 816 DLSGNDFVSLPPYFHLFNNLRSLKLSKCMKVQEIPELPLYIKRVEARDCESLERFPQLAR 875

Query: 817 DFDCVEQ 823
            F C E+
Sbjct: 876 IFKCNEE 882


>gi|357129911|ref|XP_003566603.1| PREDICTED: putative disease resistance protein RGA4-like
           [Brachypodium distachyon]
          Length = 1297

 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 159/328 (48%), Gaps = 35/328 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G+ I E+P S+  L  L  L +     + +LP  IS L  L+T+ LS C+ L   P
Sbjct: 582 LDLRGSQIMELPQSVGRLKHLRYLDVSSSP-IRTLPNCISRLHNLQTIHLSNCTNLYMLP 640

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             + S+E+L  L +       +P SI  L  L+ L ++ C  L  LPSSI  L+SL+ LN
Sbjct: 641 MSICSLENLETLNISSCHFHTLPDSIGHLQNLQNLNMSFCHFLCSLPSSIGKLQSLQALN 700

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRP--------------------------T 163
             GC  LE +PDT+ ++++L+ L++S   I +                            
Sbjct: 701 FKGCANLETLPDTVCRLQNLQVLNLSQCGILQALPENIGNLSNLLHLNLSQCNSDLEAIP 760

Query: 164 SSIFLMKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK 220
           +S+  +  L +L  S C   +E P S    L L   +L   S  +AL + + + + +L  
Sbjct: 761 NSVGCITRLHTLDMSHCSSLSELPGSIGGLLELQTLILSHHSHSLALPITT-SHLPNLQT 819

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQS 279
           LDLS   +G   +P+ + NL++LKEL L +  N   LP SI+ L  LE L L  C+ L  
Sbjct: 820 LDLS-WNIGLEELPASVGNLYNLKELILFQCWNLRELPESITNLTMLENLSLVGCEELAK 878

Query: 280 LPQ--IPPNLQFVRANGCSSLVTLFGAL 305
           LP+     NL+ ++ + C SL  L G  
Sbjct: 879 LPEGMAGTNLKHLKNDQCRSLERLPGGF 906



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 2/129 (1%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           IR L   I  L  L  + L+ C NL  LP +I +L+ L TLN+S    F   P+      
Sbjct: 612 IRTLPNCISRLHNLQTIHLSNCTNLYMLPMSICSLENLETLNISS-CHFHTLPDSIGHLQ 670

Query: 730 QLLEIHLEGTAIR-GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L  +++        LP+SI  L      N K C NL++LP T+  L++L+++  S C  
Sbjct: 671 NLQNLNMSFCHFLCSLPSSIGKLQSLQALNFKGCANLETLPDTVCRLQNLQVLNLSQCGI 730

Query: 789 LKNVTETLG 797
           L+ + E +G
Sbjct: 731 LQALPENIG 739



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 1/138 (0%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+ I EL  ++  L  L  L ++    +  LP  IS L  L T++LS  +     P    
Sbjct: 586 GSQIMELPQSVGRLKHLRYLDVSSSP-IRTLPNCISRLHNLQTIHLSNCTNLYMLPMSIC 644

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           S + L  +++       LP SI  L      N+  C  L SLPS+I  L+SL+ +   GC
Sbjct: 645 SLENLETLNISSCHFHTLPDSIGHLQNLQNLNMSFCHFLCSLPSSIGKLQSLQALNFKGC 704

Query: 787 SKLKNVTETLGKVESLEV 804
           + L+ + +T+ ++++L+V
Sbjct: 705 ANLETLPDTVCRLQNLQV 722



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 24/114 (21%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + E+P+S+  L  L+ L L  C NL  LP +I++L  L  L L GC +L K P+ +A   
Sbjct: 828 LEELPASVGNLYNLKELILFQCWNLRELPESITNLTMLENLSLVGCEELAKLPEGMA--- 884

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
                   GT++  + +             ++C++L RLP        L+TL+L
Sbjct: 885 --------GTNLKHLKN-------------DQCRSLERLPGGFGKWTKLETLSL 917



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           +D+  +  ++  +  L  L ++ C +L  LP +I  L  L TL LS  S     P  TS 
Sbjct: 754 SDLEAIPNSVGCITRLHTLDMSHCSSLSELPGSIGGLLELQTLILSHHSHSLALPITTSH 813

Query: 728 RDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMM 781
              L  + L     +  LPAS+    GN L NLK+     C NL+ LP +I  L  L  +
Sbjct: 814 LPNLQTLDLSWNIGLEELPASV----GN-LYNLKELILFQCWNLRELPESITNLTMLENL 868

Query: 782 YPSGCSKLKNVTETLG 797
              GC +L  + E + 
Sbjct: 869 SLVGCEELAKLPEGMA 884



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 27/129 (20%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLS------KLYLDGTSIAEVPSSIELL--------- 98
            L+T+  SGC+K++  P +  ++ DLS       L + G        S  LL         
Sbjct: 1115 LKTVTASGCTKMRPKPCLPDAIADLSLSNSSEILSVGGMLGPSSSKSASLLRRLWIRQCY 1174

Query: 99   ------------PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
                        P LE L +  C+ L  LP +I  L  L+ L ++ C  LE +P+ LG++
Sbjct: 1175 ASSNDWNILQHRPKLEDLTIEYCERLHVLPEAIRHLSMLRKLKINNCTDLEVLPEWLGEL 1234

Query: 147  ESLEELDVS 155
             ++E L++S
Sbjct: 1235 VAIEYLEIS 1243



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 25/118 (21%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            LE LT++ C+ L  LP  I  L  LR L+++ C+ L+  P+ +                 
Sbjct: 1189 LEDLTIEYCERLHVLPEAIRHLSMLRKLKINNCTDLEVLPEWLGE--------------- 1233

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK--LENVPDTLGK 145
                    L  +E L ++ C+ LV LP  +  L +L+   +SGC    +EN     GK
Sbjct: 1234 --------LVAIEYLEISCCQKLVSLPEGLQCLVALEEFIVSGCSSVLIENCRKDKGK 1283



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            +EDL+  Y +   +  +P +I  L  L  L +N C +L  LP  +  L +++ L +S C 
Sbjct: 1189 LEDLTIEYCERLHV--LPEAIRHLSMLRKLKINNCTDLEVLPEWLGELVAIEYLEISCCQ 1246

Query: 135  KLENVPDTLGKVESLEELDVSG 156
            KL ++P+ L  + +LEE  VSG
Sbjct: 1247 KLVSLPEGLQCLVALEEFIVSG 1268


>gi|147845221|emb|CAN81612.1| hypothetical protein VITISV_003348 [Vitis vinifera]
          Length = 901

 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/193 (46%), Positives = 111/193 (57%), Gaps = 2/193 (1%)

Query: 3   SMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           S  +L  L  DG +S+ EV  SI  L  L LL LK CK L   P  I+ +K L+ L  SG
Sbjct: 567 SXPNLEKLIXDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIIN-MKALQILNFSG 625

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CS LKKFP I  +ME+L  LYL   +I E+PSSI  L GL LL L  CKNL  LP+SI  
Sbjct: 626 CSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICK 685

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           LKSL+ L LSGC KLE+ P+ +  +++L+EL + GT I    SSI  +K L  L    C 
Sbjct: 686 LKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCK 745

Query: 182 EPPASASWHLHLP 194
               S    L LP
Sbjct: 746 NLCQSLIEILELP 758



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 86/130 (66%), Gaps = 7/130 (5%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L DLYL   +I E+PSSI  LTGL LL LK CKNL SLP +I  LK L  L LSG
Sbjct: 637 GNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSG 696

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL-------VR 114
           CSKL+ FP+++ +M++L +L LDGT I  +PSSIE L  L LL L +CKNL       + 
Sbjct: 697 CSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNLCQSLIEILE 756

Query: 115 LPSSINGLKS 124
           LP S+  + +
Sbjct: 757 LPPSVRDIDA 766



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 93/147 (63%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ DG + + E+  +I  L  L+ L L  CK L   P  I+ +K L  LN SG S
Sbjct: 569 PNLEKLIXDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIIN-MKALQILNFSGCS 627

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             ++FP I  + + LL+++L   AI  LP+SI  L+G +L +LK CKNLKSLP++I  L+
Sbjct: 628 GLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLK 687

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  ++ SGCSKL++  E +  +++L+
Sbjct: 688 SLEYLFLSGCSKLESFPEMMENMDNLK 714



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 142/303 (46%), Gaps = 39/303 (12%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LY  G  +  +PSS       +L+ L  C  +L  L      L+ L T+ LS    
Sbjct: 501 ELRYLYWHGYPLEYLPSS---FNAEDLVELDMCYSSLKQLWENDMLLEKLNTIRLSCSQH 557

Query: 65  LKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           L + P I  S  +L KL  DG +S+ EV  SI  L  L LL L  CK LV  P  IN +K
Sbjct: 558 LIEIPDISISXPNLEKLIXDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIIN-MK 616

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           +L+ LN SGC  L+  P+  G +E+L +L ++  AI    SSI  +  L  L    C   
Sbjct: 617 ALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNL 676

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNL 240
            +                       LP  T +C L  L+   LS C   E+  P  ++N+
Sbjct: 677 KS-----------------------LP--TSICKLKSLEYLFLSGCSKLES-FPEMMENM 710

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL-QSLPQI---PPNLQFVRANGCS 296
            +LKEL L+      LP+SI  L  L  L L  CK L QSL +I   PP+++ + A+  +
Sbjct: 711 DNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNLCQSLIEILELPPSVRDIDAHNFT 770

Query: 297 SLV 299
           +L+
Sbjct: 771 ALL 773



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 68/117 (58%), Gaps = 7/117 (5%)

Query: 656 EFPDIVQVLSDGTDIRELSLAIE-------LLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +FP+I   + +  D+   S+AIE        L GLV L L  CKNL+ LP +I  LK L 
Sbjct: 631 KFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLE 690

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L LSG SK   FPE+  + D L E+ L+GT I  LP+SIE L   IL NL+ CKNL
Sbjct: 691 YLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNL 747



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 131/346 (37%), Gaps = 82/346 (23%)

Query: 203 CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
           C   +  P +  + +L  L+ S C  G    P+   N+ +L +LYL       LP+SI  
Sbjct: 603 CKKLVCFPCIINMKALQILNFSGCS-GLKKFPNIQGNMENLLDLYLASIAIEELPSSIGH 661

Query: 263 LLNLEELELEDCKRLQSLPQIP---PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCID 319
           L  L  L+L+ CK L+SLP       +L+++  +GCS L           S   ++  +D
Sbjct: 662 LTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSGCSKL----------ESFPEMMENMD 711

Query: 320 SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
           +LK L  +G  I +L                                   SSI   +   
Sbjct: 712 NLKELLLDGTPIEVL----------------------------------PSSIERLKVLI 737

Query: 380 LYNVNKVVGF--AICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE------GHYIYFR 431
           L N+ K      ++  + ++P             AH     + GS           +++ 
Sbjct: 738 LLNLRKCKNLCQSLIEILELPPS------VRDIDAHNFTALLPGSSRRIIYRLNSDVFYY 791

Query: 432 G---KFGH--------VVSDHLWLLFLP-RHGHNWQFES----NLIRLSF----RSISDP 471
           G    FGH        V S+H+WL + P      +QF      N I +SF    R IS  
Sbjct: 792 GDLKDFGHDFHWKGNIVGSEHVWLGYQPCSQLRLFQFNDPNDWNRIEISFEAAQRFISSA 851

Query: 472 TWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNEVHHDFVGSN 517
           +  VK+CG   IY  ++E      ++  +   CN+ E   D  G N
Sbjct: 852 SNVVKKCGICFIYAEDLEGIHLQNRKQLKRGGCNVVERSSDREGLN 897



 Score = 42.7 bits (99), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 31/51 (60%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSL 51
           M +M +L +L LDGT I  +PSSIE L  L LL L+ CKNL    + I  L
Sbjct: 707 MENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNLCQSLIEILEL 757


>gi|255564938|ref|XP_002523462.1| hypothetical protein RCOM_1044030 [Ricinus communis]
 gi|223537290|gb|EEF38921.1| hypothetical protein RCOM_1044030 [Ricinus communis]
          Length = 468

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 228/511 (44%), Gaps = 110/511 (21%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           L+ L LSGC  LKK P +  +                          LE + ++ CKNL+
Sbjct: 7   LKRLVLSGCVNLKKLPDLSTAT------------------------NLEFIDVDGCKNLL 42

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNL 172
            +PS I  L++L  LNL GC KL+NVP +L ++ESL+ L +S    ++ P      ++NL
Sbjct: 43  EIPSYIQYLRNLYYLNLCGCEKLQNVP-SLVQLESLKFLSLSYCYNLKIPPEIPEGIQNL 101

Query: 173 R--------SLYFSGCNEPPASASWH--LHLPFNL--LGKSSCPVALMLPSLTGVCSLTK 220
           R           F    E      W+  L  P NL  L  + C     LPSL  + SLT 
Sbjct: 102 RLNRCGLKAIAAFEKLQELLQLNKWYECLRFPHNLQKLSLNGCENLDSLPSLVDLKSLTL 161

Query: 221 LDLSDCG----------------LGEAAI---PSDIDNLHSLKELYLN--RN----NFVT 255
           LDLS C                 LG + I   PS I  L SL EL L   RN      V 
Sbjct: 162 LDLSCCSNLTKLPNIPRGVQVLRLGNSGIEKLPSSISCLSSLVELELKEWRNLAETAIVK 221

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-----FGALKLCRS 310
           +P  I  L +L  L L +CKRL+ LP++P  L+ ++A  C+SL T      F  ++   +
Sbjct: 222 IPGDIFSLSSLLVLCLNNCKRLRVLPELPKQLRQLQALNCTSLETAKKSSSFAVVQE-PN 280

Query: 311 KYT----IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV--FPGSQIPKWFM 364
           KYT      NC +  +    N +A S+LR    ++ +      L  +  FPGS++P+ F 
Sbjct: 281 KYTYQFNYCNCFNLKQTSHCNIIADSLLR----IKGIDKATEALEYIVGFPGSEVPEQFE 336

Query: 365 YQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGE 424
            ++EGSSI++  P + YN +K +GFA    +   +       F       + C ++  GE
Sbjct: 337 CKSEGSSISIKLPPH-YNNSKDLGFAF---YNGNQKDDNDKDFD----RAICCYLEEKGE 388

Query: 425 GHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFR-SISDPT---WKVKRCGF 480
            + +          SDHL++ +         +  N   +SF+ +  DP+    ++K CG 
Sbjct: 389 KYILE---------SDHLFIWYTTE-----SYCDNGNEVSFKFNCKDPSGVKLEIKNCGV 434

Query: 481 HPIYMHEVEEFDETT-----KQSTRFTSCNL 506
           H I++ + E   + T        +RF+  N+
Sbjct: 435 HMIWIEQKESDPKQTVIAVPGSQSRFSGANI 465



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 11/160 (6%)

Query: 29  GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSI 88
            L+ L+L GC+NL SLP ++  LK L  L+LS CS L K P I   ++ L    L  + I
Sbjct: 135 NLQKLSLNGCENLDSLP-SLVDLKSLTLLDLSCCSNLTKLPNIPRGVQVLR---LGNSGI 190

Query: 89  AEVPSSIELLPGLELLYLNECKNL-----VRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
            ++PSSI  L  L  L L E +NL     V++P  I  L SL  L L+ C +L  +P+  
Sbjct: 191 EKLPSSISCLSSLVELELKEWRNLAETAIVKIPGDIFSLSSLLVLCLNNCKRLRVLPELP 250

Query: 144 GKVESLEELDVSGTAIRRPTSSIFLMK--NLRSLYFSGCN 181
            ++  L+ L+ +     + +SS  +++  N  +  F+ CN
Sbjct: 251 KQLRQLQALNCTSLETAKKSSSFAVVQEPNKYTYQFNYCN 290



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 25/186 (13%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
            L +L+LNGC+NL+ LP  +  LK L+ L+LS  S   + P I      L    L  + I
Sbjct: 135 NLQKLSLNGCENLDSLPSLVD-LKSLTLLDLSCCSNLTKLPNIPRGVQVL---RLGNSGI 190

Query: 742 RGLPASIELLSGNILSNLKDCKNLKS-----LPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             LP+SI  LS  +   LK+ +NL       +P  I  L SL ++  + C +L+ + E  
Sbjct: 191 EKLPSSISCLSSLVELELKEWRNLAETAIVKIPGDIFSLSSLLVLCLNNCKRLRVLPEL- 249

Query: 797 GKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVDKCMKLST 856
                          PK       +  +++ET  K +   ++++ + +    + C   + 
Sbjct: 250 ---------------PKQLRQLQALNCTSLETAKKSSSFAVVQEPNKYTYQFNYCNCFNL 294

Query: 857 TATSAC 862
             TS C
Sbjct: 295 KQTSHC 300



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L L+GC NL++LP  +S    L  +++ G     E P        L  ++L G   +
Sbjct: 7   LKRLVLSGCVNLKKLP-DLSTATNLEFIDVDGCKNLLEIPSYIQYLRNLYYLNLCGCEKL 65

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           + +P+ ++L S   LS L  C NLK  P    G+++LR+
Sbjct: 66  QNVPSLVQLESLKFLS-LSYCYNLKIPPEIPEGIQNLRL 103


>gi|357497293|ref|XP_003618935.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355493950|gb|AES75153.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 431

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 194/434 (44%), Gaps = 56/434 (12%)

Query: 77  DLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           +L  L L+G   + E+  S+ LL  L  L + +C NL+R+P++I GL SLK LN+ GC K
Sbjct: 28  NLEWLDLEGCVKLVELDPSLGLLRKLVYLNVKDCGNLIRIPNNIFGLSSLKDLNMCGCSK 87

Query: 136 LENVPDTLGK--VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
           L +    L K  + S ++ D+S +A            + RS+        P    W + L
Sbjct: 88  LFDDSRHLKKPDISSKKKHDISESA-----------SHSRSM--------PFVFEWTM-L 127

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
             N L  +   +  +L SL  +  L ++D+S C L +  +P  I+ L  L+ L L   +F
Sbjct: 128 LHNSLFPAPTALTYLLHSLRSLYCLREVDISYCHLSQ--LPDTIECLRWLERLNLGGIDF 185

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT 313
            TLP S+  L  L  L LE C+ L+ LPQ+P +     A+  +   +  G +        
Sbjct: 186 ATLP-SLRKLSKLVYLNLEHCRLLEFLPQLPFSNTIEWAHNENKFFSTTGLV-------- 236

Query: 314 IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH--KLSIVFPGSQIPKWFMYQNEGSS 371
           I NC +       + +  S + ++++    + P H  ++ IV PG +IP W   ++   S
Sbjct: 237 IFNCPELSDKEHCSSMTFSWMMQFIQ---ANPPSHFDRIQIVTPGIEIPSWINNRSVDGS 293

Query: 372 ITVTRPSYLY-NVNKVVGFAICCVFQVPKHSTG-------TYLFHSYPAHELECSMDGSG 423
           I +     ++ N N ++GF  C VF +     G         +F    +H++ C      
Sbjct: 294 IPIDLTPIMHDNNNNIIGFVCCAVFSMAPRGEGFSSPARMELVFDPIDSHKISCMRVQ-- 351

Query: 424 EGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPI 483
               +   G      S HLW+++LPR  ++   E   I            KVK CG+  +
Sbjct: 352 ----VILNGFLVLTKSSHLWIIYLPRESYD---EFGKIHFDIIRGEGLDMKVKTCGYRWV 404

Query: 484 YMHEVEEFDETTKQ 497
              +++EF+ T   
Sbjct: 405 CKQDLQEFNLTMNH 418



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 6/161 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
                +L  L L+G   + E+  S+ LL  L  L +K C NL  +P  I  L  L+ L +
Sbjct: 23  FGGFPNLEWLDLEGCVKLVELDPSLGLLRKLVYLNVKDCGNLIRIPNNIFGLSSLKDLNM 82

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC----KNLVRL 115
            GCSKL    + +   +  SK   D +  A    S+  +    +L  N        L  L
Sbjct: 83  CGCSKLFDDSRHLKKPDISSKKKHDISESASHSRSMPFVFEWTMLLHNSLFPAPTALTYL 142

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             S+  L  L+ +++S  C L  +PDT+  +  LE L++ G
Sbjct: 143 LHSLRSLYCLREVDISY-CHLSQLPDTIECLRWLERLNLGG 182


>gi|356514972|ref|XP_003526175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1158

 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 222/506 (43%), Gaps = 53/506 (10%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D  ++ EV    +L   LE L L+GC  L  +  +I  LK L  L L  C  L   P  V
Sbjct: 657  DCDNLIEVQDFEDL--NLEELNLQGCVQLRQIHPSIGHLKKLTHLNLKYCKSLVNLPHFV 714

Query: 73   ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
              + +L +L L G   + ++  SI     L  L L  CK+LV LP  +  L +LK LNL 
Sbjct: 715  EDL-NLEELNLQGCVQLRQIHPSIGHPKKLTHLNLKYCKSLVNLPHFVGDL-NLKELNLE 772

Query: 132  GCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            GC +L  +  ++G +  L  L++    + I  P S+I  + +L  L   GC+        
Sbjct: 773  GCVQLRQIHPSIGHLRKLTVLNLKDCKSLISFP-SNILGLSSLTYLSLFGCS-------- 823

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            +LH     +  S   V  +LPS T    + +LDLS C L    IP    NLHSL++L L 
Sbjct: 824  NLHT----IDLSEDSVRCLLPSYTIFSCMRQLDLSFCNL--LKIPDAFGNLHSLEKLCLR 877

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             NNF TLP+    L  L  L L+ CKRL+ LP++P    +      +     +G      
Sbjct: 878  GNNFETLPSLEE-LSKLLLLNLQHCKRLKYLPELPSATDWPMKKWGTVEEDEYGL----- 931

Query: 310  SKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK-----------LSIVFPGSQ 358
                I NC + +            + + ++L  +S   H            +S + PGS+
Sbjct: 932  -GLNIFNCPELVDRDCCTDKCFFWMMQMVQLFTISLNCHPSGDSMAWRVPLISSIIPGSE 990

Query: 359  IPKWFMYQNEG-SSITVTRPSYLYNVNKV-VGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
            IP WF  Q+ G  ++     S+   ++K  +G A+  +F V K           P  ++E
Sbjct: 991  IPSWFDEQHLGMGNVINIDISHFMQLDKYWIGIALSVIFVVHKE-------RRMPPPDME 1043

Query: 417  CSMDGSGEGHY-IYFRGKFGHVVSDHLWLLFLPR-HGHNWQFESNLIRLSFRSI--SDPT 472
                     +  + FR       SDHLWL + PR H     F+   +    R +   D  
Sbjct: 1044 QRKKERPSLYIPVLFREDLVTDESDHLWLFYYPRSHFDVSNFDELKVVCRPRDLDYQDLD 1103

Query: 473  WKVKRCGFHPIYMHEVEEFDETTKQS 498
             +VK+ G+  +Y H+++  + TT ++
Sbjct: 1104 VEVKKYGYCWVYEHDLDLSNLTTMRN 1129



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-T 739
             L +L L GC  L ++  +I   K L+ LNL         P      + L E++LEG  
Sbjct: 717 LNLEELNLQGCVQLRQIHPSIGHPKKLTHLNLKYCKSLVNLPHFVGDLN-LKELNLEGCV 775

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            +R +  SI  L    + NLKDCK+L S PS I GL SL  +   GCS L  +
Sbjct: 776 QLRQIHPSIGHLRKLTVLNLKDCKSLISFPSNILGLSSLTYLSLFGCSNLHTI 828



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 6/161 (3%)

Query: 646 NCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           N   LW+     P++ ++ +SD  ++ E+    +L   L +L L GC  L ++  +I  L
Sbjct: 636 NIQHLWDSTQPIPNLRRLNVSDCDNLIEVQDFEDL--NLEELNLQGCVQLRQIHPSIGHL 693

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCK 763
           K L+ LNL         P      + L E++L+G   +R +  SI         NLK CK
Sbjct: 694 KKLTHLNLKYCKSLVNLPHFVEDLN-LEELNLQGCVQLRQIHPSIGHPKKLTHLNLKYCK 752

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +L +LP  +  L +L+ +   GC +L+ +  ++G +  L V
Sbjct: 753 SLVNLPHFVGDL-NLKELNLEGCVQLRQIHPSIGHLRKLTV 792



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 32/196 (16%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL-SLAIELLFGLVQLT--- 687
           G+  VR +SP+EP   SRLW    +  D+ + +S   + + L ++ +E   G+   T   
Sbjct: 508 GKCIVREKSPKEPRKWSRLW----DCEDLYKFMSSNKEAKNLEAIVVEDEPGMFSETTMR 563

Query: 688 ---LNGCKNLER--LPR-------TISALKYLSTLN---------LSGLSKFREFPEITS 726
              L+  KNL+   LPR       TI   K+  +LN         +     F   P+   
Sbjct: 564 FDALSKMKNLKLLILPRYYEKGLSTIEEEKFSGSLNYLSNELGYLIWHFYPFNFLPKCFQ 623

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
             + L+E++L G+ I+ L  S + +      N+ DC NL  +    +   +L  +   GC
Sbjct: 624 PHN-LVELNLSGSNIQHLWDSTQPIPNLRRLNVSDCDNLIEVQDFED--LNLEELNLQGC 680

Query: 787 SKLKNVTETLGKVESL 802
            +L+ +  ++G ++ L
Sbjct: 681 VQLRQIHPSIGHLKKL 696


>gi|227438181|gb|ACP30580.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1275

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 196/448 (43%), Gaps = 81/448 (18%)

Query: 5    KDLSDLY---LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            KD S L    L+ +S   V S +     L+ L L+GC  + +LP  +  ++ L  L L+G
Sbjct: 649  KDTSKLKWVNLNHSSNLRVLSGLSKAQNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNG 708

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            C+ L   P+I  S+  L  L L   S  +    I     LE LYL+   ++ +LP  I  
Sbjct: 709  CTSLNSLPEI--SLVSLETLILSNCSNLKEFRVIS--QNLEALYLDGT-SVKKLPLDIKI 763

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            LK L  LN+ GC KL+  PD L  +++L+E                       L  S C+
Sbjct: 764  LKRLALLNMKGCTKLKEFPDCLDDLKALKE-----------------------LILSDCS 800

Query: 182  EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
            +           P N  G+S             +  L  L L   GL E      I  + 
Sbjct: 801  KLQ-------QFPAN--GES-------------IKVLETLRLDATGLTE------IPKIS 832

Query: 242  SLKELYLNRNN-FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            SL+ L L++N+  ++LP +IS L  L+ L+L+ CK L S+P++PPNLQ   A+GC SL T
Sbjct: 833  SLQCLCLSKNDQIISLPDNISQLYQLKWLDLKYCKSLTSIPKLPPNLQHFDAHGCCSLKT 892

Query: 301  LFGAL-------KLCRSKYTIINCIDSLKLLRKNGLA------ISMLREYLELQAVSDPG 347
            +   L       ++C S +   +C + L++  K  ++        +L +      VSD  
Sbjct: 893  VSNPLACLTTTQQIC-STFIFTSC-NKLEMSAKKDISSFAQRKCQLLSDAQNCCNVSDLE 950

Query: 348  HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
               S  FPGS++P W  ++  G  + +  P + +  NK+ G A+C V   P        F
Sbjct: 951  PLFSTCFPGSELPSWLGHEAVGCMLELRMPPH-WRENKLAGLALCAVVSFPNSQVQMKCF 1009

Query: 408  HSYPAHELECSMDGSGEGHYIYFRGKFG 435
                  ++E       EG +I F    G
Sbjct: 1010 SVKCTLKIEVK-----EGSWIDFSFPVG 1032



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 90/160 (56%), Gaps = 6/160 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  ++L  L L+G T +  +P  ++ +  L +L L GC +L+SLP    SL  L TL L
Sbjct: 671 LSKAQNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEI--SLVSLETLIL 728

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S CS LK+F  I  ++E    LYLDGTS+ ++P  I++L  L LL +  C  L   P  +
Sbjct: 729 SNCSNLKEFRVISQNLE---ALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCL 785

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
           + LK+LK L LS C KL+  P     ++ LE L +  T +
Sbjct: 786 DDLKALKELILSDCSKLQQFPANGESIKVLETLRLDATGL 825



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 5/137 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +  L   ++ +  L+ L LNGC +L  LP    +L  L TL LS  S  +EF  I+ +
Sbjct: 686 TKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEI--SLVSLETLILSNCSNLKEFRVISQN 743

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L   +L+GT+++ LP  I++L    L N+K C  LK  P  ++ L++L+ +  S CS
Sbjct: 744 LEAL---YLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKELILSDCS 800

Query: 788 KLKNVTETLGKVESLEV 804
           KL+        ++ LE 
Sbjct: 801 KLQQFPANGESIKVLET 817



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 31/176 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NCS L     EF  I Q L     DGT +++L L I++L  L  L + GC  L+  P  +
Sbjct: 730 NCSNL----KEFRVISQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCL 785

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP--ASIELL----SGNI 755
             LK L  L LS  SK ++FP    S   L  + L+ T +  +P  +S++ L    +  I
Sbjct: 786 DDLKALKELILSDCSKLQQFPANGESIKVLETLRLDATGLTEIPKISSLQCLCLSKNDQI 845

Query: 756 LS--------------NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           +S              +LK CK+L S+P     L+        GC  LK V+  L 
Sbjct: 846 ISLPDNISQLYQLKWLDLKYCKSLTSIPKLPPNLQHFDA---HGCCSLKTVSNPLA 898


>gi|108738462|gb|ABG00764.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 170/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIXELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIXELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR 811
           +    VR +S ++
Sbjct: 220 QDLHLVRCTSLSK 232



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 300 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 359

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
            +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 360 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 418

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 419 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+       L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIXELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284


>gi|255553307|ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223543328|gb|EEF44860.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1186

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 195/432 (45%), Gaps = 66/432 (15%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G S+  +P+ +  L  L  L ++   NL  L   I  L  L+ L LS    L + P    
Sbjct: 633  GFSLNALPTDL-CLDKLVALDMRNS-NLKYLWKGIRFLVELKVLNLSHSHGLVRTPNFTG 690

Query: 74   SMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             +  L KL L D   + +V  SI  L  L +  L +CKNL +LP  I  L SL+ L LSG
Sbjct: 691  -LPTLEKLVLKDCKDLVDVDKSIGGLDKLIIFNLKDCKNLKKLPVEITMLHSLEELILSG 749

Query: 133  CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
            C  L  +P  L  ++SL  L + G  + +  S   + ++ + L  S   +   S SW L 
Sbjct: 750  CLNLVELPKDLENLQSLRVLHLDGIPMNQVNS---ITEDFKELSLS--LQHLTSRSWLLQ 804

Query: 193  LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                   KS   ++  LP       L  L L+DC L +  IP D+  L SL+ L L+ N 
Sbjct: 805  R----WAKSRFSLS-SLPRF-----LVSLSLADCCLSDNVIPGDLSCLPSLEYLNLSGNP 854

Query: 253  FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN------------------- 293
            F  LP SI+ L  L  L L+ C  L+S+P++P +L  ++A                    
Sbjct: 855  FRFLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERITNLPNLLKSLN 914

Query: 294  ----GCSSLVTLFGALKL---------CRSKYTIINCIDSLKLLRK---NGLAISMLREY 337
                GC SLV + G  KL               +IN ++SLK +     N LA + +R  
Sbjct: 915  LEIFGCDSLVEVQGLFKLEPVGNINTQILKSVGLIN-LESLKGVEVEMFNALACTEMRT- 972

Query: 338  LELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV---TRPSYLYNVNKVVGFAICCV 394
              +Q + + G   SI  PG+ IP+WF  ++E SSI+     +P +     K+ G ++C +
Sbjct: 973  -SIQVLQECG-IFSIFLPGNTIPEWFNQRSESSSISFEVEAKPGH-----KIKGLSLCTL 1025

Query: 395  FQVPKHSTGTYL 406
            +   K   G Y+
Sbjct: 1026 YTYDKLEGGGYI 1037



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 6/115 (5%)

Query: 693 NLERLPRTISALKYLSTLNLS---GLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           NL+ L + I  L  L  LNLS   GL +   F  + +    +L+   +   +  +  SI 
Sbjct: 657 NLKYLWKGIRFLVELKVLNLSHSHGLVRTPNFTGLPTLEKLVLK---DCKDLVDVDKSIG 713

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            L   I+ NLKDCKNLK LP  I  L SL  +  SGC  L  + + L  ++SL V
Sbjct: 714 GLDKLIIFNLKDCKNLKKLPVEITMLHSLEELILSGCLNLVELPKDLENLQSLRV 768



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL D  D+ ++  +I  L  L+   L  CKNL++LP  I+ L  L  L LSG     E P
Sbjct: 698 VLKDCKDLVDVDKSIGGLDKLIIFNLKDCKNLKKLPVEITMLHSLEELILSGCLNLVELP 757

Query: 723 EITSSRDQLLEIHLEG 738
           +   +   L  +HL+G
Sbjct: 758 KDLENLQSLRVLHLDG 773



 Score = 39.7 bits (91), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 31/176 (17%)

Query: 660 IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL---- 715
           I+  L D  ++++L + I +L  L +L L+GC NL  LP+ +  L+ L  L+L G+    
Sbjct: 719 IIFNLKDCKNLKKLPVEITMLHSLEELILSGCLNLVELPKDLENLQSLRVLHLDGIPMNQ 778

Query: 716 --SKFREFPEIT------SSRDQLLEIHLEGT-AIRGLP---ASIEL----LSGNILSNL 759
             S   +F E++      +SR  LL+   +   ++  LP    S+ L    LS N++   
Sbjct: 779 VNSITEDFKELSLSLQHLTSRSWLLQRWAKSRFSLSSLPRFLVSLSLADCCLSDNVIPGD 838

Query: 760 KDC-----------KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             C              + LP +IN L  L  +    C  LK++ E    + SL+ 
Sbjct: 839 LSCLPSLEYLNLSGNPFRFLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKA 894


>gi|108738562|gb|ABG00813.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 170/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASASWHLHL--------PF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S     +L        P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGXXXNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G   +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGXXXNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738450|gb|ABG00758.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738472|gb|ABG00769.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738510|gb|ABG00788.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738522|gb|ABG00794.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 170/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|255569040|ref|XP_002525489.1| hypothetical protein RCOM_0740580 [Ricinus communis]
 gi|223535168|gb|EEF36847.1| hypothetical protein RCOM_0740580 [Ricinus communis]
          Length = 159

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 88/126 (69%), Gaps = 1/126 (0%)

Query: 35  LKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSS 94
           +K  + LS  P  I  ++ L+ L  SGC KLKKFP++  +ME L+KLYLDGT I ++P S
Sbjct: 1   MKNYRCLSKFPSNIE-MQSLQVLNFSGCCKLKKFPEVKGNMERLAKLYLDGTDIEQLPLS 59

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           IE L  L+LL LN CK+L+ LPSS   L SLKTL +SGC KL  +P+ LG VE LEELD+
Sbjct: 60  IERLTDLDLLNLNNCKSLISLPSSFCDLNSLKTLTVSGCLKLGKLPEQLGNVECLEELDM 119

Query: 155 SGTAIR 160
           SGT IR
Sbjct: 120 SGTTIR 125



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 83/150 (55%), Gaps = 2/150 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           L + P  I  ++ L  LN SG  K ++FPE+  + ++L +++L+GT I  LP SIE L+ 
Sbjct: 7   LSKFPSNIE-MQSLQVLNFSGCCKLKKFPEVKGNMERLAKLYLDGTDIEQLPLSIERLTD 65

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWNRP 812
             L NL +CK+L SLPS+   L SL+ +  SGC KL  + E LG VE L E+ +S     
Sbjct: 66  LDLLNLNNCKSLISLPSSFCDLNSLKTLTVSGCLKLGKLPEQLGNVECLEELDMSGTTIR 125

Query: 813 KMQNDFDCVEQSAVETVTKLAKAELLRDSD 842
            M  D   ++Q  + +   L   +  +D D
Sbjct: 126 MMAQDLTVIDQQILYSCKPLQMIKEWKDRD 155



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 59/87 (67%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M+ L+ LYLDGT I ++P SIE LT L+LL L  CK+L SLP +   L  L+TL +SG
Sbjct: 38  GNMERLAKLYLDGTDIEQLPLSIERLTDLDLLNLNNCKSLISLPSSFCDLNSLKTLTVSG 97

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSI 88
           C KL K P+ + ++E L +L + GT+I
Sbjct: 98  CLKLGKLPEQLGNVECLEELDMSGTTI 124



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 10/129 (7%)

Query: 638 RQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
           ++ P+  GN  RL           ++  DGTDI +L L+IE L  L  L LN CK+L  L
Sbjct: 31  KKFPEVKGNMERL----------AKLYLDGTDIEQLPLSIERLTDLDLLNLNNCKSLISL 80

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P +   L  L TL +SG  K  + PE   + + L E+ + GT IR +   + ++   IL 
Sbjct: 81  PSSFCDLNSLKTLTVSGCLKLGKLPEQLGNVECLEELDMSGTTIRMMAQDLTVIDQQILY 140

Query: 758 NLKDCKNLK 766
           + K  + +K
Sbjct: 141 SCKPLQMIK 149



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
           L + PS+I  ++SL+ LN SGCCKL+  P+  G +E L +L + GT I +   SI
Sbjct: 7   LSKFPSNIE-MQSLQVLNFSGCCKLKKFPEVKGNMERLAKLYLDGTDIEQLPLSI 60


>gi|15230525|ref|NP_190725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572078|emb|CAB63021.1| propable disease resistance protein [Arabidopsis thaliana]
 gi|332645286|gb|AEE78807.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1226

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 189/468 (40%), Gaps = 135/468 (28%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            L  L LKGC +L SLP    +L  L  L LS CS LK+F  I  ++E    LYLDGTSI 
Sbjct: 679  LVFLNLKGCTSLKSLPEI--NLVSLEILILSNCSNLKEFRVISQNLE---TLYLDGTSIK 733

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            E+P +  +L  L +L +  C  L   P  ++ LK+LK L LS C KL+N P    +++ L
Sbjct: 734  ELPLNFNILQRLVILNMKGCAKLKEFPDCLDDLKALKELILSDCWKLQNFPAICERIKVL 793

Query: 150  EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
            E L +  T I                      E P                       M+
Sbjct: 794  EILRLDTTTI---------------------TEIP-----------------------MI 809

Query: 210  PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
             SL  +C L+K D        +++P +I  L  LK L                       
Sbjct: 810  SSLQCLC-LSKND------HISSLPDNISQLSQLKWL----------------------- 839

Query: 270  ELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL------KLCRSKYTIINC------ 317
            +L+ CK L S+P++PPNLQ + A+GC SL T+   L      +   S + + NC      
Sbjct: 840  DLKYCKSLTSIPKLPPNLQHLDAHGCCSLKTVSNPLACLTTAQQIYSTFILTNCNKLERS 899

Query: 318  ----------------IDSLKLLRKNGLAISMLREYLELQAV------------SDPGHK 349
                            +D+ K    + L    +  Y+    V            SD    
Sbjct: 900  AKEEISSFAQRKCQLLLDAQKRCNVSSLISFSICCYISKIFVSICIFLSISMQNSDSEPL 959

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
             SI FPGS++P WF ++  G  + +  P + ++ N++ G A+C V   PK       F  
Sbjct: 960  FSICFPGSELPSWFCHEAVGPVLELRMPPH-WHENRLAGVALCAVVTFPKSQEQINCFSV 1018

Query: 410  YPAHELECSMDGSGEGHYIYFRGKFG----------HVVSDHLWLLFL 447
                +LE       EG +I F    G          ++ S+H+++ ++
Sbjct: 1019 KCTFKLEVK-----EGSWIEFSFPVGRWSNQGNIVANIASEHVFIGYI 1061



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 23/235 (9%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  LYLDGTSI E+P +  +L  L +L +KGC  L   P  +  LK L+ L LS C K
Sbjct: 720 QNLETLYLDGTSIKELPLNFNILQRLVILNMKGCAKLKEFPDCLDDLKALKELILSDCWK 779

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+ FP I   ++ L  L LD T+I E+P    ++  L+ L L++  ++  LP +I+ L  
Sbjct: 780 LQNFPAICERIKVLEILRLDTTTITEIP----MISSLQCLCLSKNDHISSLPDNISQLSQ 835

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS-------------SIFLMKN 171
           LK L+L  C  L ++P       +L+ LD  G    +  S             S F++ N
Sbjct: 836 LKWLDLKYCKSLTSIPKL---PPNLQHLDAHGCCSLKTVSNPLACLTTAQQIYSTFILTN 892

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
              L  S   E  + A     L  +   +  C V+ ++ S +  C ++K+ +S C
Sbjct: 893 CNKLERSAKEEISSFAQRKCQLLLD--AQKRCNVSSLI-SFSICCYISKIFVSIC 944



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           DI  LS A  L+F    L L GC +L+ LP     L  L  L LS  S  +EF  I+ + 
Sbjct: 669 DISGLSKAQRLVF----LNLKGCTSLKSLPEI--NLVSLEILILSNCSNLKEFRVISQNL 722

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           + L   +L+GT+I+ LP +  +L   ++ N+K C  LK  P  ++ L++L+ +  S C K
Sbjct: 723 ETL---YLDGTSIKELPLNFNILQRLVILNMKGCAKLKEFPDCLDDLKALKELILSDCWK 779

Query: 789 LKNVTETLGKVESLEV 804
           L+N      +++ LE+
Sbjct: 780 LQNFPAICERIKVLEI 795



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 100/224 (44%), Gaps = 39/224 (17%)

Query: 645 GNCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
            NCS L     EF  I Q L     DGT I+EL L   +L  LV L + GC  L+  P  
Sbjct: 707 SNCSNL----KEFRVISQNLETLYLDGTSIKELPLNFNILQRLVILNMKGCAKLKEFPDC 762

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI-HLEGTA------------------- 740
           +  LK L  L LS   K + FP I   R ++LEI  L+ T                    
Sbjct: 763 LDDLKALKELILSDCWKLQNFPAIC-ERIKVLEILRLDTTTITEIPMISSLQCLCLSKND 821

Query: 741 -IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            I  LP +I  LS     +LK CK+L S+P     L+ L      GC  LK V+  L  +
Sbjct: 822 HISSLPDNISQLSQLKWLDLKYCKSLTSIPKLPPNLQHLD---AHGCCSLKTVSNPLACL 878

Query: 800 ESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLA--KAELLRDS 841
            + +   S++    +  + + +E+SA E ++  A  K +LL D+
Sbjct: 879 TTAQQIYSTF----ILTNCNKLERSAKEEISSFAQRKCQLLLDA 918


>gi|108738549|gb|ABG00807.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 170/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|15242338|ref|NP_199336.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759608|dbj|BAB11396.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|332007836|gb|AED95219.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1231

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 216/491 (43%), Gaps = 82/491 (16%)

Query: 33   LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP 92
            L L+GC +L  LP  +  +  L  L L GC+ L   P+I  +   L  L L G S  +  
Sbjct: 686  LNLEGCTSLKELPDEMKDMTNLVFLNLRGCTSLLSLPKITTN--SLKTLILSGCSSFQTF 743

Query: 93   SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
              I     LE LYLN  + +  LP +I  L  L  LNL  C  L  +PD LG+       
Sbjct: 744  EVIS--EHLESLYLNGTE-INGLPPAIGNLHRLIFLNLKDCKNLATLPDCLGE------- 793

Query: 153  DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSL 212
                            +K+L+ L  S C++        L +  ++  K    + L+L   
Sbjct: 794  ----------------LKSLQELKLSRCSK--------LKIFPDVTAKMESLLVLLLD-- 827

Query: 213  TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELEL 271
                          G   A +P  I +L SL+ L L+RN N  TL   +  + +L+ LEL
Sbjct: 828  --------------GTSIAELPCSIFHLSSLRRLCLSRNDNIRTLRFDMGHMFHLKWLEL 873

Query: 272  EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL------CRSKYTIINCIDSLKLLR 325
            + CK L SLP +PPNLQ + A+GC+SL T+     L        S +   NC   L+ + 
Sbjct: 874  KYCKNLTSLPILPPNLQCLNAHGCTSLRTVASPQTLPTPTEQIHSTFIFTNC-HELEQVS 932

Query: 326  KNGLAISMLREYLELQAVS----DPGHK--LSIVFPGSQIPKWFMYQNEGSSITVTRPSY 379
            KN + IS +++  +L +      D  +K  +   FPG +IP WF +Q  GS + +  P  
Sbjct: 933  KNAI-ISYVQKKSKLMSADRYSPDFVYKSLIGTCFPGCEIPAWFNHQALGSVLILELPQA 991

Query: 380  LYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYI---YFRGKFGH 436
             +N ++++G A+C V    ++             E   ++  S E   +     +G   H
Sbjct: 992  -WNSSRIIGIALCVVVSFKEYRDQNSSLQVQCTCEF-TNVSLSQESFMVGGWSEQGDETH 1049

Query: 437  VV-SDHLWLLF--LPRHGHNWQFE-SNLIRLSFRSISDPT----WKVKRCGFHPIYMHEV 488
             V SDH+++ +  L    +  QF  +  I L F+  +  +     KV +CGF  +Y  E 
Sbjct: 1050 TVESDHIFIGYTTLLNIKNRQQFPLATEISLRFQVTNGTSEVEKCKVIKCGFSLVY--EP 1107

Query: 489  EEFDETTKQST 499
             E D T+ + T
Sbjct: 1108 NEADSTSWKET 1118



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 104/180 (57%), Gaps = 8/180 (4%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLE 58
           ++   +L  L L+G TS+ E+P  ++ +T L  L L+GC +L SLP +T +SLK   TL 
Sbjct: 677 LSEAPNLLRLNLEGCTSLKELPDEMKDMTNLVFLNLRGCTSLLSLPKITTNSLK---TLI 733

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           LSGCS  + F  I    E L  LYL+GT I  +P +I  L  L  L L +CKNL  LP  
Sbjct: 734 LSGCSSFQTFEVI---SEHLESLYLNGTEINGLPPAIGNLHRLIFLNLKDCKNLATLPDC 790

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  LKSL+ L LS C KL+  PD   K+ESL  L + GT+I     SIF + +LR L  S
Sbjct: 791 LGELKSLQELKLSRCSKLKIFPDVTAKMESLLVLLLDGTSIAELPCSIFHLSSLRRLCLS 850



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 78/134 (58%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  LYL+GT I  +P +I  L  L  L LK CKNL++LP  +  LK L+ L+LS CSKLK
Sbjct: 750 LESLYLNGTEINGLPPAIGNLHRLIFLNLKDCKNLATLPDCLGELKSLQELKLSRCSKLK 809

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            FP + A ME L  L LDGTSIAE+P SI  L  L  L L+   N+  L   +  +  LK
Sbjct: 810 IFPDVTAKMESLLVLLLDGTSIAELPCSIFHLSSLRRLCLSRNDNIRTLRFDMGHMFHLK 869

Query: 127 TLNLSGCCKLENVP 140
            L L  C  L ++P
Sbjct: 870 WLELKYCKNLTSLP 883



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)

Query: 656 EFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           E P+++++  +G T ++EL   ++ +  LV L L GC +L  LP+  +    L TL LSG
Sbjct: 679 EAPNLLRLNLEGCTSLKELPDEMKDMTNLVFLNLRGCTSLLSLPKITT--NSLKTLILSG 736

Query: 715 LSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING 774
            S F+ F  I+   + L  ++L GT I GLP +I  L   I  NLKDCKNL +LP  +  
Sbjct: 737 CSSFQTFEVIS---EHLESLYLNGTEINGLPPAIGNLHRLIFLNLKDCKNLATLPDCLGE 793

Query: 775 LRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           L+SL+ +  S CSKLK   +   K+ESL V L
Sbjct: 794 LKSLQELKLSRCSKLKIFPDVTAKMESLLVLL 825



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 72/152 (47%), Gaps = 27/152 (17%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +GT+I  L  AI  L  L+ L L  CKNL  LP  +  LK L  L LS  SK + FP++T
Sbjct: 756 NGTEINGLPPAIGNLHRLIFLNLKDCKNLATLPDCLGELKSLQELKLSRCSKLKIFPDVT 815

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSG----------NILS--------------NLKD 761
           +  + LL + L+GT+I  LP SI  LS           NI +               LK 
Sbjct: 816 AKMESLLVLLLDGTSIAELPCSIFHLSSLRRLCLSRNDNIRTLRFDMGHMFHLKWLELKY 875

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           CKNL SLP     L+ L      GC+ L+ V 
Sbjct: 876 CKNLTSLPILPPNLQCLN---AHGCTSLRTVA 904



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 27/89 (30%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTG------------------------LELLTLKG 37
           A M+ L  L LDGTSI E+P SI  L+                         L+ L LK 
Sbjct: 816 AKMESLLVLLLDGTSIAELPCSIFHLSSLRRLCLSRNDNIRTLRFDMGHMFHLKWLELKY 875

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           CKNL+SLP+   +L+CL      GC+ L+
Sbjct: 876 CKNLTSLPILPPNLQCLNA---HGCTSLR 901


>gi|108738434|gb|ABG00750.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738436|gb|ABG00751.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738438|gb|ABG00752.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738446|gb|ABG00756.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738452|gb|ABG00759.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738460|gb|ABG00763.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738492|gb|ABG00779.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738494|gb|ABG00780.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738528|gb|ABG00797.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 170/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|356557333|ref|XP_003546971.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Glycine
            max]
          Length = 1158

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 223/520 (42%), Gaps = 129/520 (24%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            ++  V  SI  L  L  L L  CK L+SL  + S L+ LR L L GCS+LK+F     +M
Sbjct: 666  NLRNVHPSILSLKKLVRLNLFYCKALTSLR-SDSHLRSLRDLFLGGCSRLKEFSVTSENM 724

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            +DL    L  T+I E                        LPSSI  L+ L+TL L  C  
Sbjct: 725  KDL---ILTSTAINE------------------------LPSSIGSLRKLETLTLDHCKS 757

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            L N+P+ +                         +++LR L+  GC +  AS   +LH+  
Sbjct: 758  LSNLPNKVAN-----------------------LRSLRRLHIYGCTQLDAS---NLHILV 791

Query: 196  NLLGKSSCPVALMLPSLTGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFV 254
            N                 G+ SL  L L +C  L E  IP +I+ L SL+EL L   +  
Sbjct: 792  N-----------------GLKSLETLKLEECRNLFE--IPDNINLLSSLRELLLKGTDIE 832

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKY-- 312
            ++ ASI  L  LE+L+L DC+RL SLP++P +++ + A  CSSL T+   L      +  
Sbjct: 833  SVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYAINCSSLETVMFTLSAVEMLHAY 892

Query: 313  ----TIINCIDSLKLLRKNGLAISMLREYLELQAVSDP-------------GHKLSIVFP 355
                T  NC+     L ++ L+   +  Y+ ++ V+               G  +  ++P
Sbjct: 893  KLHTTFQNCVK----LDQHSLSAIGVNAYVNIKKVAYDQFSTIGTNSIKFLGGPVDFIYP 948

Query: 356  GSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHEL 415
            GS++P+WF+Y+   +S+TV   S +   +K++GF  C +      +   Y+         
Sbjct: 949  GSEVPEWFVYRTTQASVTVDLSSSV-PCSKIMGFIFCVIVDQFTSNDKNYI-------GC 1000

Query: 416  ECSMD-GSGE----GHYIYFRGKFG-HVVSDHLWLLFLPRHG-HNWQFESN--------- 459
            +C M+ G GE    GH   +         SDH+ L +  +    N + ES          
Sbjct: 1001 DCYMETGVGERVTRGHMDNWSSIHACEFFSDHVCLWYDEKCCLKNQECESESMEELMASY 1060

Query: 460  --LIRLSFRSISDPTWK------VKRCGFHPIYMHEVEEF 491
               I   F + +   W+      +K CG  PIY  E + F
Sbjct: 1061 NPKISFEFFAKTGSIWEKRSDIIIKGCGVCPIYDTECDNF 1100



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 4/121 (3%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           ++R +  +I  L  LV+L L  CK L  L R+ S L+ L  L L G S+ +EF   + + 
Sbjct: 666 NLRNVHPSILSLKKLVRLNLFYCKALTSL-RSDSHLRSLRDLFLGGCSRLKEFSVTSENM 724

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
             L+   L  TAI  LP+SI  L       L  CK+L +LP+ +  LRSLR ++  GC++
Sbjct: 725 KDLI---LTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVANLRSLRRLHIYGCTQ 781

Query: 789 L 789
           L
Sbjct: 782 L 782



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 29/184 (15%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           G CSRL E +    ++  ++   T I EL  +I  L  L  LTL+ CK+L  LP  ++ L
Sbjct: 709 GGCSRLKEFSVTSENMKDLILTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVANL 768

Query: 705 KYLSTLNLSGLSKFR--------------------------EFPEITSSRDQLLEIHLEG 738
           + L  L++ G ++                            E P+  +    L E+ L+G
Sbjct: 769 RSLRRLHIYGCTQLDASNLHILVNGLKSLETLKLEECRNLFEIPDNINLLSSLRELLLKG 828

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T I  + ASI+ LS     +L DC+ L SLP      +S++ +Y   CS L+ V  TL  
Sbjct: 829 TDIESVSASIKHLSKLEKLDLSDCRRLYSLPELP---QSIKELYAINCSSLETVMFTLSA 885

Query: 799 VESL 802
           VE L
Sbjct: 886 VEML 889


>gi|224092392|ref|XP_002334897.1| predicted protein [Populus trichocarpa]
 gi|222832146|gb|EEE70623.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 167/368 (45%), Gaps = 36/368 (9%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           NL  L      L  L+   LS    L K P + +S   L KL L G +S+ EV  SI   
Sbjct: 220 NLKELWKGKKILNRLKIFNLSHSRNLVKTPNLHSS--SLEKLILKGCSSLVEVHQSIGHS 277

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L  L L  C +L  LP SI  +KSL+T+ + GC +LE +P+ +G ++ L EL   G  
Sbjct: 278 TSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFLTELLADGIK 337

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
             +  SSI  +K ++ L   GC+  P S S        L+      +   LP+      L
Sbjct: 338 TEQFLSSIGQLKYVKRLSLRGCSPTPPSCS--------LISAGVSILKCWLPTSFTEWRL 389

Query: 219 TK-LDLSDCGLGEAAIPS-DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            K L LS+CGL + A    D   L SL++L L+ N F +LP  I  L  L  L ++ C+ 
Sbjct: 390 VKHLMLSNCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFLPKLSHLVVQTCEY 449

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA------ 330
           L S+P +P +L  + A+ C SL  +   + +   K   +N   SL L    G+       
Sbjct: 450 LVSIPDLPSSLCLLDASSCKSLERV--RIPIESKKELCVNIFQSLSLEEIQGIEGLNNSF 507

Query: 331 --ISMLR--------EYLELQAVSDPGHKLSIVFPGS-----QIPKWFMYQNEGSSITVT 375
             +S+ R        +   L+A+ + GH   I F        ++P W  Y+ EG S++  
Sbjct: 508 WNVSIERRSHSPNKLQKSVLEAMCNRGHGYRINFSLEHDELHEMPDWMSYRGEGCSLSFH 567

Query: 376 RPSYLYNV 383
            P   + +
Sbjct: 568 IPPVFHGL 575



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 20/193 (10%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L G +S+ EV  SI   T L  L LKGC +L +LP +I ++K L T+++ GCS+L
Sbjct: 256 LEKLILKGCSSLVEVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQL 315

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK------NLVR----- 114
           +K P+ +  M+ L++L  DG    +  SSI  L  ++ L L  C       +L+      
Sbjct: 316 EKLPEGMGDMKFLTELLADGIKTEQFLSSIGQLKYVKRLSLRGCSPTPPSCSLISAGVSI 375

Query: 115 ----LPSSINGLKSLKTLNLSGCC---KLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
               LP+S    + +K L LS C    +  N  D  G + SLE+LD+S          I 
Sbjct: 376 LKCWLPTSFTEWRLVKHLMLSNCGLSDRATNCVDFSG-LFSLEKLDLSENKFSSLPYGIG 434

Query: 168 LMKNLRSLYFSGC 180
            +  L  L    C
Sbjct: 435 FLPKLSHLVVQTC 447



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 20/156 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK----NLSSLPVTISSLKC--- 53
           M  MK L++L  DG    +  SSI  L  ++ L+L+GC     + S +   +S LKC   
Sbjct: 322 MGDMKFLTELLADGIKTEQFLSSIGQLKYVKRLSLRGCSPTPPSCSLISAGVSILKCWLP 381

Query: 54  --------LRTLELSGCSKLKKFPQIV--ASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
                   ++ L LS C    +    V  + +  L KL L     + +P  I  LP L  
Sbjct: 382 TSFTEWRLVKHLMLSNCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFLPKLSH 441

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           L +  C+ LV +P   +   SL  L+ S C  LE V
Sbjct: 442 LVVQTCEYLVSIPDLPS---SLCLLDASSCKSLERV 474



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 59/227 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQ----VLSDG--TDIRELSLAIELLFG--- 682
           GR+ VR + P+EPG  +R+W + D +  + Q    V+ +G   D+R  S A  L  G   
Sbjct: 105 GREVVRDKFPKEPGKRTRIWNQEDAWNVLEQQKGTVVVEGLALDVRA-SEAKALCAGSFA 163

Query: 683 ----LVQLTLNGCK--------------------NLERLPRTISALKYLSTLNLSG---- 714
               L  L +NG                       L+  P   +A  YL+ L++      
Sbjct: 164 EMKRLNLLQINGVHLTGSFKLLSKELMWICWHRCPLKDFPSDFTA-DYLAVLDMQYSNLK 222

Query: 715 --------LSKFREFPEITSSRD-----QLLEIHLEGTAIRGLPASIELL------SGNI 755
                   L++ + F  ++ SR+      L    LE   ++G  + +E+       +  +
Sbjct: 223 ELWKGKKILNRLKIF-NLSHSRNLVKTPNLHSSSLEKLILKGCSSLVEVHQSIGHSTSLV 281

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             NLK C +LK+LP +I  ++SL  M   GCS+L+ + E +G ++ L
Sbjct: 282 FLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFL 328


>gi|108738506|gb|ABG00786.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESXGNLSXLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L  LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEALDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G +  L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESXGNLSXLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEAL-DACSWR 456



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|82542047|gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1146

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 167/357 (46%), Gaps = 30/357 (8%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           NL  L      L  L+ + LS    L K P + +S   L KL L G +S+ +V  SI  L
Sbjct: 649 NLKELWKGKKILNRLKIINLSHSQHLIKTPNLHSS--SLEKLILKGCSSLVDVHQSIGNL 706

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L  L L  C +L  LP SI  +KSL+TLN+SGC +LE +P+ +G +ESL +L   G  
Sbjct: 707 TSLVFLNLEGCWSLKILPKSIGNVKSLETLNISGCSQLEKLPEHMGDMESLTKLLADGIE 766

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
             +  SSI  +K +R L   G N  P+S+         L+          LP+     S+
Sbjct: 767 NEQFLSSIGQLKYVRRLSLRGYNSAPSSS---------LISAGVLNWKRWLPTSFEWRSV 817

Query: 219 TKLDLSDCGLGEAAIP-SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
             L LS+  L + A    D   L +L+EL L+ N F +LP+ I  L  L  L +  CK L
Sbjct: 818 KSLKLSNGSLSDRATNCVDFRGLFALEELDLSGNKFSSLPSGIGFLPKLGFLSVRACKYL 877

Query: 278 QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTI-INCIDSLKLLRKNGL-AISMLR 335
            S+P +P +L+ + A+ C SL  +   ++  +  Y   I   +S  L    G+  +S + 
Sbjct: 878 VSIPDLPSSLRCLGASSCKSLERVRIPIESKKELYIFHIYLDESHSLEEIQGIEGLSNIF 937

Query: 336 EYLE---------------LQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRP 377
            Y+                ++A+ + GH+  I     ++P W  Y  EG S++   P
Sbjct: 938 WYIGVDSREHSRNKLQKSVVEAMCNGGHRYCISCLPGEMPNWLSYSEEGCSLSFHIP 994



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 102/216 (47%), Gaps = 24/216 (11%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L G +S+ +V  SI  LT L  L L+GC +L  LP +I ++K L TL +SGCS+L
Sbjct: 685 LEKLILKGCSSLVDVHQSIGNLTSLVFLNLEGCWSLKILPKSIGNVKSLETLNISGCSQL 744

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-------------NL 112
           +K P+ +  ME L+KL  DG    +  SSI  L  +  L L                 N 
Sbjct: 745 EKLPEHMGDMESLTKLLADGIENEQFLSSIGQLKYVRRLSLRGYNSAPSSSLISAGVLNW 804

Query: 113 VR-LPSSI--NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            R LP+S     +KSLK  N S   +  N  D  G + +LEELD+SG       S I  +
Sbjct: 805 KRWLPTSFEWRSVKSLKLSNGSLSDRATNCVDFRG-LFALEELDLSGNKFSSLPSGIGFL 863

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNL--LGKSSC 203
             L  L    C    +       LP +L  LG SSC
Sbjct: 864 PKLGFLSVRACKYLVSIPD----LPSSLRCLGASSC 895



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 59/227 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEF--------PDIVQVLS---DGTDIRELS------ 674
           GR+ V + SP+EPG  +R+W + D +         D+V+ L+     ++ + LS      
Sbjct: 534 GREVVCKASPKEPGKRTRIWNQKDAWNVLEQQKGTDVVEGLALDVRASEAKSLSTGSFAK 593

Query: 675 --------------------LAIELLF------------------GLVQLTLNGCKNLER 696
                               L+ EL++                   LV L +    NL+ 
Sbjct: 594 MKRLNLLQINGAHLTGSFKLLSKELMWICWLQCPSKYFPSDFTLDNLVVLDMQ-YSNLKE 652

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNI 755
           L +    L  L  +NLS      + P + SS   L ++ L+G +++  +  SI  L+  +
Sbjct: 653 LWKGKKILNRLKIINLSHSQHLIKTPNLHSS--SLEKLILKGCSSLVDVHQSIGNLTSLV 710

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             NL+ C +LK LP +I  ++SL  +  SGCS+L+ + E +G +ESL
Sbjct: 711 FLNLEGCWSLKILPKSIGNVKSLETLNISGCSQLEKLPEHMGDMESL 757



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 20/155 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS--------------LPV 46
           M  M+ L+ L  DG    +  SSI  L  +  L+L+G  +  S              LP 
Sbjct: 751 MGDMESLTKLLADGIENEQFLSSIGQLKYVRRLSLRGYNSAPSSSLISAGVLNWKRWLPT 810

Query: 47  TISSLKCLRTLELSGCSKLKKFPQIV--ASMEDLSKLYLDGTSIAEVPSSIELLPGLELL 104
           +    + +++L+LS  S   +    V    +  L +L L G   + +PS I  LP L  L
Sbjct: 811 SF-EWRSVKSLKLSNGSLSDRATNCVDFRGLFALEELDLSGNKFSSLPSGIGFLPKLGFL 869

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            +  CK LV +P   +   SL+ L  S C  LE V
Sbjct: 870 SVRACKYLVSIPDLPS---SLRCLGASSCKSLERV 901



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L   + + ++  +I  L  LV L L GC +L+ LP++I  +K L TLN+SG S+  + P
Sbjct: 689 ILKGCSSLVDVHQSIGNLTSLVFLNLEGCWSLKILPKSIGNVKSLETLNISGCSQLEKLP 748

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASI 748
           E     + L ++  +G       +SI
Sbjct: 749 EHMGDMESLTKLLADGIENEQFLSSI 774


>gi|108738554|gb|ABG00809.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 179/405 (44%), Gaps = 90/405 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT++  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL-CRSKYTIINC 317
           C+ L+ LP +P  L+ +    C SL ++    +L   +   +INC
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLNLINC 546



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT++  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTA++
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAVK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT ++ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|227438289|gb|ACP30634.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1251

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/181 (43%), Positives = 107/181 (59%), Gaps = 5/181 (2%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             +S  +L  L L+G  S+  +  SI  LT L  L LK C  L S+P T+  L+ L  L +
Sbjct: 1032 FSSAPNLELLDLEGCNSLVSISQSICYLTKLVSLNLKDCSKLESIPSTVV-LESLEVLNI 1090

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            SGCSKL  FP+I  +++   +LY+ GT I E+P SI+ L  LE+L L   K+LV LP+SI
Sbjct: 1091 SGCSKLMNFPEISPNVK---QLYMGGTIIQEIPPSIKNLVLLEILDLENSKHLVNLPTSI 1147

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              LK L+TLNLSGC  LE  P    K++ L+ LD+S TAI+   SS+  +  L  L  + 
Sbjct: 1148 CKLKHLETLNLSGCSSLERFPGLSRKMKCLKSLDLSRTAIKELHSSVSYLTALEELRLTE 1207

Query: 180  C 180
            C
Sbjct: 1208 C 1208



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 73/118 (61%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            ++  LY+ GT I E+P SI+ L  LE+L L+  K+L +LP +I  LK L TL LSGCS L
Sbjct: 1105 NVKQLYMGGTIIQEIPPSIKNLVLLEILDLENSKHLVNLPTSICKLKHLETLNLSGCSSL 1164

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            ++FP +   M+ L  L L  T+I E+ SS+  L  LE L L EC+NL  LP  +  L+
Sbjct: 1165 ERFPGLSRKMKCLKSLDLSRTAIKELHSSVSYLTALEELRLTECRNLASLPDDVWSLR 1222



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 21/228 (9%)

Query: 71   IVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            ++ S+E L K+ L  +  + ++P      P LELL L  C +LV +  SI  L  L +LN
Sbjct: 1008 LLQSLEKLKKMRLSYSCQLTKIPR-FSSAPNLELLDLEGCNSLVSISQSICYLTKLVSLN 1066

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGC---NEPP 184
            L  C KLE++P T+  +ESLE L++SG +  +  P  S     N++ LY  G      PP
Sbjct: 1067 LKDCSKLESIPSTVV-LESLEVLNISGCSKLMNFPEIS----PNVKQLYMGGTIIQEIPP 1121

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNLH 241
            +  +  L     +L   +    + LP  T +C L  L+   LS C   E   P     + 
Sbjct: 1122 SIKNLVL---LEILDLENSKHLVNLP--TSICKLKHLETLNLSGCSSLER-FPGLSRKMK 1175

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
             LK L L+R     L +S+S L  LEEL L +C+ L SLP    +L+F
Sbjct: 1176 CLKSLDLSRTAIKELHSSVSYLTALEELRLTECRNLASLPDDVWSLRF 1223



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 3/157 (1%)

Query: 647  CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            CS+L    +  P++ Q+   GT I+E+  +I+ L  L  L L   K+L  LP +I  LK+
Sbjct: 1093 CSKLMNFPEISPNVKQLYMGGTIIQEIPPSIKNLVLLEILDLENSKHLVNLPTSICKLKH 1152

Query: 707  LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
            L TLNLSG S    FP ++     L  + L  TAI+ L +S+  L+      L +C+NL 
Sbjct: 1153 LETLNLSGCSSLERFPGLSRKMKCLKSLDLSRTAIKELHSSVSYLTALEELRLTECRNLA 1212

Query: 767  SLPSTINGLR---SLRMMYPSGCSKLKNVTETLGKVE 800
            SLP  +  LR     R +     S+L N    L KV+
Sbjct: 1213 SLPDDVWSLRFKVEFRQIDTEKFSRLWNRLGWLKKVQ 1249



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 4/118 (3%)

Query: 673  LSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLL 732
            +S +I  L  LV L L  C  LE +P T+  L+ L  LN+SG SK   FPEI+ +  QL 
Sbjct: 1052 ISQSICYLTKLVSLNLKDCSKLESIPSTV-VLESLEVLNISGCSKLMNFPEISPNVKQL- 1109

Query: 733  EIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
              ++ GT I+ +P SI+ L    + +L++ K+L +LP++I  L+ L  +  SGCS L+
Sbjct: 1110 --YMGGTIIQEIPPSIKNLVLLEILDLENSKHLVNLPTSICKLKHLETLNLSGCSSLE 1165



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 4    MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLK 52
            MK L  L L  T+I E+ SS+  LT LE L L  C+NL+SLP  + SL+
Sbjct: 1174 MKCLKSLDLSRTAIKELHSSVSYLTALEELRLTECRNLASLPDDVWSLR 1222


>gi|108738558|gb|ABG00811.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 170/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKXPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 144/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L   PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKXPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKXPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 300 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 359

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
            +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 360 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 418

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 419 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKXPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284


>gi|108738556|gb|ABG00810.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L  LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYILNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYILNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L ++   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYILNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738458|gb|ABG00762.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738512|gb|ABG00789.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738514|gb|ABG00790.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 170/385 (44%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT++  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT++  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTA++
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAVK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT ++ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAVKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|356545161|ref|XP_003541013.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 182/404 (45%), Gaps = 56/404 (13%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            ++ E+P   E L  LE L LKGC  L  +  +I  L+ L  L L  C+ L + P     +
Sbjct: 650  NLIELPDLGEALN-LEWLDLKGCIKLKKINPSIGLLRKLAYLNLKDCTSLVELPHFKEDL 708

Query: 76   EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             +L  L L+G T +  +  S+ LL  LE L L +CK+LV LP+SI  L SLK L+L GC 
Sbjct: 709  -NLQHLTLEGCTHLKHINPSVGLLRKLEYLILEDCKSLVSLPNSILCLNSLKYLSLYGCS 767

Query: 135  KLEN--VPDTLGKVESLEELDVS-GTAIRRPTSSI---FLMKNLRSLYFSGCNEPPASAS 188
             L N  +       E L++L +   +   +  SSI   + M + R  Y    N+      
Sbjct: 768  GLYNSGLLKEPRDAELLKQLCIGEASTDSKSISSIVKRWFMWSPRLWYSRAHNDS----- 822

Query: 189  WHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                            V  +LPS   +  S+ +LDLS C L    IP  I NLH L+ L 
Sbjct: 823  ----------------VGCLLPSAPTIPPSMIQLDLSYCNL--VQIPDAIGNLHCLEILN 864

Query: 248  LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP---PNLQFVRANG-----CSSLV 299
            L  N+F  LP  + GL  L  L+L+ CK L+  P++P    N++  RA G     C  LV
Sbjct: 865  LEGNSFAALP-DLKGLSKLRYLKLDHCKHLKDFPKLPARTANVELPRALGLSMFNCPELV 923

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
               G      S   +   I  ++   +N  A       + +   S+P   +  V PGS+I
Sbjct: 924  EREGC-----SSMVLSWMIQIVQAHYQNNFAWWP----IGMPGFSNP--YICSVIPGSEI 972

Query: 360  PKWFMYQNEGSSITVT-RPSYLYNVNKVVGFAICCVFQVPKHST 402
              WF  Q+      +T  P  L   +K +G A C VF    HST
Sbjct: 973  EGWFTTQHVSKDNLITIDPPPLMQHDKCIGVAYCVVFAA--HST 1014



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 4/151 (2%)

Query: 643 EPGNCSRLWEEADEFPDIVQ-VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           E  N   LW++     ++ + VLS   ++ EL    E L  L  L L GC  L+++  +I
Sbjct: 623 EYSNIKHLWKDRKPLHNLRRLVLSHSKNLIELPDLGEAL-NLEWLDLKGCIKLKKINPSI 681

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK 760
             L+ L+ LNL   +   E P      + L  + LEG T ++ +  S+ LL       L+
Sbjct: 682 GLLRKLAYLNLKDCTSLVELPHFKEDLN-LQHLTLEGCTHLKHINPSVGLLRKLEYLILE 740

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           DCK+L SLP++I  L SL+ +   GCS L N
Sbjct: 741 DCKSLVSLPNSILCLNSLKYLSLYGCSGLYN 771



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 34/160 (21%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G T +  +  S+ LL  LE L L+ CK+L SLP +I  L  L+ L L GCS 
Sbjct: 709 NLQHLTLEGCTHLKHINPSVGLLRKLEYLILEDCKSLVSLPNSILCLNSLKYLSLYGCSG 768

Query: 65  LK-----KFPQIVASMEDL--SKLYLDGTSIAEV-------------------------P 92
           L      K P+    ++ L   +   D  SI+ +                         P
Sbjct: 769 LYNSGLLKEPRDAELLKQLCIGEASTDSKSISSIVKRWFMWSPRLWYSRAHNDSVGCLLP 828

Query: 93  SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
           S+  + P +  L L+ C NLV++P +I  L  L+ LNL G
Sbjct: 829 SAPTIPPSMIQLDLSYC-NLVQIPDAIGNLHCLEILNLEG 867



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 22/186 (11%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLF-----GLVQL 686
           GR  VR +SP+EP N SRLW    ++ D+ +++S+     +L  AI + +     G  ++
Sbjct: 509 GRCIVREKSPKEPSNWSRLW----KYQDLYKIMSNNMAAEKLE-AIAVDYESDDEGFHEI 563

Query: 687 TLNGCKNLERLPRTISALKYLSTLNLSGLSK------FREFPEITSSR----DQLLEIHL 736
            ++    +  L + +      S+ +L+ LS       + ++P +   +    ++L+E+ L
Sbjct: 564 RVDALSKMSHL-KLLKLWGVTSSGSLNHLSDELGYITWDKYPFVCLPKSFQPNKLVELCL 622

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           E + I+ L    + L       L   KNL  LP     L +L  +   GC KLK +  ++
Sbjct: 623 EYSNIKHLWKDRKPLHNLRRLVLSHSKNLIELPDLGEAL-NLEWLDLKGCIKLKKINPSI 681

Query: 797 GKVESL 802
           G +  L
Sbjct: 682 GLLRKL 687


>gi|108738564|gb|ABG00814.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCIFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L  LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYILNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 146/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L L+ C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDLRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCIFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 31/209 (14%)

Query: 100 GLELLYLNECKNLVRLPSS------------------------INGLKSLKTLNLSGCCK 135
            LE L   +C  LV++P S                        ++GLK L+ L LSGC  
Sbjct: 77  ALEKLVFEQCTLLVKVPKSVGNLRKLIHLDLRRCSKLSEFLVDVSGLKLLEKLFLSGCSD 136

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--NEPPASASWHLHL 193
           L  +P+ +G + SL+EL + GTAI+    SI  ++NL  L   GC   E P        L
Sbjct: 137 LSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSL 196

Query: 194 PFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
               L  ++      LPS  G + +L  L L  C    + IP  I+ L SLK+L++N + 
Sbjct: 197 EKLYLDDTALK---NLPSSIGDLKNLQDLHLVRCT-SLSKIPDSINELKSLKKLFINGSA 252

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLP 281
              LP   S L +L +    DC  L+ +P
Sbjct: 253 VEELPLKPSSLPSLYDFSAGDCIFLKQVP 281



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L  C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDLRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 12/127 (9%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  +D+  L   I  +  L +L L+G   ++ LP +I+ L+ L  L+L G  K +E P 
Sbjct: 131 LSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRG-CKIQELPL 188

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSL 778
              +   L +++L+ TA++ LP+SI    G+ L NL+D     C +L  +P +IN L+SL
Sbjct: 189 CIGTLKSLEKLYLDDTALKNLPSSI----GD-LKNLQDLHLVRCTSLSKIPDSINELKSL 243

Query: 779 RMMYPSG 785
           + ++ +G
Sbjct: 244 KKLFING 250



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 300 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEK 359

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
            +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 360 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 418

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 419 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLE------IHLEG------------------TAIRGLPASIELLSGNILSNLKD 761
           SS   L +      I L+                   T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCIFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L ++   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYILNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738432|gb|ABG00749.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 22/149 (14%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------- 692
           + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK             
Sbjct: 136 DLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKS 195

Query: 693 ---------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
                     L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+  
Sbjct: 196 LEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEE 255

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTI 772
           LP     L      +  DCK LK +PS+I
Sbjct: 256 LPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738430|gb|ABG00748.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738470|gb|ABG00768.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738480|gb|ABG00773.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738482|gb|ABG00774.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738500|gb|ABG00783.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738508|gb|ABG00787.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738516|gb|ABG00791.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738518|gb|ABG00792.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738532|gb|ABG00799.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738535|gb|ABG00800.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKHVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 48/303 (15%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLPSLTGVCSLT 219
              L SLY FS          +  H+P ++        L  SS P+  +   +  +  + 
Sbjct: 263 ---LPSLYDFSA-----GDCKFLKHVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIR 314

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
           +L+L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ 
Sbjct: 315 ELELRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKR 373

Query: 280 LPQ 282
           LP+
Sbjct: 374 LPE 376



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR 811
           +    VR +S ++
Sbjct: 220 QDLHLVRCTSLSK 232



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 300 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 359

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
            +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 360 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 418

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 419 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+       L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKHVPSSI 284



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I  LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEI---------HLEG---------------TAIRGLPASIELLSGNILSNLKD 761
           SS   L +          H+                 T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKHVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738502|gb|ABG00784.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 168/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP  I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E P      
Sbjct: 204 TALKNLPSXIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEXPLKPXSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDXSAXDXKXLKQXXXSXXRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 138/298 (46%), Gaps = 38/298 (12%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPS I  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P S    
Sbjct: 207 KNLPSXIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEXPLKPXS---- 262

Query: 169 MKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
              L SLY     +         S         L  SS P+  +   +  +  + +L+L 
Sbjct: 263 ---LPSLYDXSAXDXKXLKQXXXSXXRLNSLLQLQLSSTPIEALPEEIGALHFIRELELR 319

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 320 NCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+   +G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSXIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVE 827
           +    VR +S ++ P   N+   +++     SAVE
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 300 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 359

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
            +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 360 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 418

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 419 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 12/127 (9%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  +D+  L   I  +  L +L L+G   ++ LP +I+ L+ L  L+L G  K +E P 
Sbjct: 131 LSGCSDLSVLPENIGAMTSLKELLLDGTA-IKNLPESINRLQNLEILSLRG-CKIQELPL 188

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSL 778
              +   L +++L+ TA++ LP+ I    G+ L NL+D     C +L  +P +IN L+SL
Sbjct: 189 CIGTLKSLEKLYLDDTALKNLPSXI----GD-LKNLQDLHLVRCTSLSKIPDSINELKSL 243

Query: 779 RMMYPSG 785
           + ++ +G
Sbjct: 244 KKLFING 250


>gi|108738456|gb|ABG00761.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738547|gb|ABG00806.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR 811
           +    VR +S ++
Sbjct: 220 QDLHLVRCTSLSK 232



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 300 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 359

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
            +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 360 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 418

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 419 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+       L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284


>gi|307135798|gb|ADN33677.1| TIR-LRR-NBS disease resistance protein [Cucumis melo subsp. melo]
          Length = 1139

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 207/451 (45%), Gaps = 53/451 (11%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++  +L  LYL D T++  +  SI  L  L LL L GC  +  LP +   L  L+ L+L
Sbjct: 483 FSAASNLEKLYLRDCTNLRTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFKLWSLKHLDL 542

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC+KL+K P   +++ +L  L+L   T++  + +S+  L  L  LYL+ C  L  LP+S
Sbjct: 543 SGCTKLEKIPDFSSAL-NLEILHLSRCTNLRTIHNSVFSLHKLISLYLDFCSTLKTLPTS 601

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
              L SL TL L  C KLE VPD L    +L  L+V   T +R    SI  +  L++L  
Sbjct: 602 CFMLTSLNTLTLYSCQKLEEVPD-LSSASNLNSLNVEKCTNLRGIHESIGSLDRLQTLVS 660

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCGLGEAAIPSD 236
             C       S         L  S C      P +   + SL  LDLS   + +  +PS 
Sbjct: 661 RKCTNLVKLPSILRLKSLKHLDLSWCSKLESFPIIDENMKSLRFLDLSFTAIKD--LPSS 718

Query: 237 IDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
           I  L  L  L L N  + ++LP +IS L++L +LEL +C+ LQ +P +P N+Q + A GC
Sbjct: 719 IGYLTELPRLNLGNCTSLISLPKTISLLMSLLDLELRNCRSLQEIPNLPQNIQNLDAYGC 778

Query: 296 SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISML-REYLELQAVSDPGHKLSIVF 354
             L          +S   I++ I      +K  L +  + RE+L +              
Sbjct: 779 ELLT---------KSPDNIVDIIS-----QKQDLTLGEISREFLLM-------------- 810

Query: 355 PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHE 414
            G +IPKWF Y+   + ++    S+ +  +     A C  F+V   S+     + +  + 
Sbjct: 811 -GVEIPKWFSYKTTSNLVSA---SFRHYSDMERTLAACVSFKVNGDSSRRISCNIFICNR 866

Query: 415 LECSMDGSGEGHYIYFRGKFGHVVSDHLWLL 445
             CS           F   F    S+++WL+
Sbjct: 867 FHCS-----------FSRPFLPSKSEYMWLV 886



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 1/171 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T++R +  +I  L  L  L    C NL +LP +I  LK L  L+LS  SK   FP I  +
Sbjct: 640 TNLRGIHESIGSLDRLQTLVSRKCTNLVKLP-SILRLKSLKHLDLSWCSKLESFPIIDEN 698

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L  + L  TAI+ LP+SI  L+     NL +C +L SLP TI+ L SL  +    C 
Sbjct: 699 MKSLRFLDLSFTAIKDLPSSIGYLTELPRLNLGNCTSLISLPKTISLLMSLLDLELRNCR 758

Query: 788 KLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
            L+ +      +++L+            N  D + Q    T+ ++++  LL
Sbjct: 759 SLQEIPNLPQNIQNLDAYGCELLTKSPDNIVDIISQKQDLTLGEISREFLL 809



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T++R +  +I  L  L  L L+GC  +++LP +   L  L  L+LSG +K  + P+
Sbjct: 494 LRDCTNLRTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFKLWSLKHLDLSGCTKLEKIPD 553

Query: 724 ITSSRDQLLEI-HLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
            +S+ +  LEI HL   T +R +  S+  L   I   L  C  LK+LP++   L SL  +
Sbjct: 554 FSSALN--LEILHLSRCTNLRTIHNSVFSLHKLISLYLDFCSTLKTLPTSCFMLTSLNTL 611

Query: 782 YPSGCSKLKNVTE 794
               C KL+ V +
Sbjct: 612 TLYSCQKLEEVPD 624



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 2/122 (1%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TA 740
            L +L L  C NL  + R+I  L  L+ L LSG    ++ P        L  + L G T 
Sbjct: 488 NLEKLYLRDCTNLRTIHRSIFCLVKLTLLCLSGCCMIKKLPTSCFKLWSLKHLDLSGCTK 547

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  +P     L+  IL +L  C NL+++ +++  L  L  +Y   CS LK +  +   + 
Sbjct: 548 LEKIPDFSSALNLEIL-HLSRCTNLRTIHNSVFSLHKLISLYLDFCSTLKTLPTSCFMLT 606

Query: 801 SL 802
           SL
Sbjct: 607 SL 608


>gi|359493291|ref|XP_002273385.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1110

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 201/403 (49%), Gaps = 23/403 (5%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  L+ DG  +  +PS+      +EL  L+  K L  L   +  L+ L+ + LS   +L
Sbjct: 590 ELRYLHWDGYPLEYLPSNFHGENLVEL-NLRYSK-LRVLWQGLKPLEKLKVINLSHSQQL 647

Query: 66  KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            + P   +   +L  L L G T++  +PSSI  L  L  L L+ C  L  L      L S
Sbjct: 648 IQIPDF-SDTPNLESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYS 706

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--E 182
           L+ LNL+ C  L+++P++L  ++ L+ L+V G +  +   ++  ++ L  LY S      
Sbjct: 707 LEYLNLASCKNLKSLPESLCNLKCLKTLNVIGCS--KLPDNLGSLECLEKLYASSSELIS 764

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTG----VCSLTKLDLSDCGLGEAAIPSDID 238
           P + +S        +L        LM  +++G    + SL +L+LS C L E  IP DI 
Sbjct: 765 PQSDSSLAGLCSLKVLDMHD--TNLMQRAISGDIGSLYSLEELNLSYCNLTEKEIPDDIC 822

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            L+SL+ L L+ N F+ +  +IS L  L EL L  CK L  +P++P +L+ + A+ C+ +
Sbjct: 823 CLYSLRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGI 882

Query: 299 VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS- 357
            TL  +  + + ++  +NC  S  L     +     R  L L A +      S V PGS 
Sbjct: 883 KTL-SSTSVLQWQWQ-LNCFKSAFLQEIQEMK---YRRLLSLPA-NGVSQGFSTVIPGSG 936

Query: 358 QIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
           ++P+W  +Q  G+ + V  P   Y+ +  +G A+CCV+ +P+ 
Sbjct: 937 ELPEWIQHQGVGNEVIVPLPPNWYDKD-FLGLALCCVY-IPQQ 977



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 58/121 (47%), Gaps = 26/121 (21%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L GC NLE +P +I  L  L  L+LS  SK +E  EI  +               
Sbjct: 659 LESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNL-------------- 704

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               S+E L      NL  CKNLKSLP ++  L+ L+ +   GCSKL    + LG +E L
Sbjct: 705 ---YSLEYL------NLASCKNLKSLPESLCNLKCLKTLNVIGCSKL---PDNLGSLECL 752

Query: 803 E 803
           E
Sbjct: 753 E 753


>gi|227438251|gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 157/348 (45%), Gaps = 73/348 (20%)

Query: 1    MASMKDLSDLYLDGTSI-TEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++ K L  L  +G  +  EVPSS+  L  L  L L+ C NL+   V +S LK L  L L
Sbjct: 670  LSNHKSLEKLVFEGCKLLVEVPSSVGNLRSLLHLDLRNCPNLTEFLVDVSGLKSLEKLYL 729

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--------- 110
            SGCS L   P+ +  M  L +L LD T+I  +P SI  L  L+ L L  C+         
Sbjct: 730  SGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLEKLQKLSLKSCRSIHELPECI 789

Query: 111  --------------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
                          +L  LPSSI  LK+L+ L++  C  L  +PDT+ K+ SL+EL + G
Sbjct: 790  GTLTSLEELDLSSTSLQSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQELIIDG 849

Query: 157  TAIR------RPTS------SIFLMKNLRSLYFSGC------------------------ 180
            +A+       +P S      +I  + +L+ L   G                         
Sbjct: 850  SAVEELPLSLKPGSLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLPCLAKFSAGG 909

Query: 181  ----NEPPASASW---HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
                 + P+S  W    L L  +     S P+  +   ++ +  + K++L +C L   ++
Sbjct: 910  CKSLKQVPSSVGWLNSLLQLKLD-----STPITTLPEEISQLRFIQKVELRNC-LSLKSL 963

Query: 234  PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            P+ I ++ +L  LYL  +N   LP +   L NL  L++  CK L+ LP
Sbjct: 964  PNKIGDMDTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLP 1011



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 18/316 (5%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + ++  L +L L  TS+  +PSSI  L  L+ L +  C +LS +P TI+ L  L+ L + 
Sbjct: 789  IGTLTSLEELDLSSTSLQSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQELIID 848

Query: 61   GCS-----------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE--LLPGLELLYLN 107
            G +            L K P  +  +  L +L +DG+++ E+P S++   LP L      
Sbjct: 849  GSAVEELPLSLKPGSLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLPCLAKFSAG 908

Query: 108  ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSI 166
             CK+L ++PSS+  L SL  L L     +  +P+ + ++  ++++++    +++   + I
Sbjct: 909  GCKSLKQVPSSVGWLNSLLQLKLDST-PITTLPEEISQLRFIQKVELRNCLSLKSLPNKI 967

Query: 167  FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSD 225
              M  L SLY  G N      ++       LL  + C     LP S  G+ SL  L + +
Sbjct: 968  GDMDTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEE 1027

Query: 226  CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
              + E  +P    NL +L+ L L  N F +LP+S+ GL +L+EL L DC+ L  LP +P 
Sbjct: 1028 TLVME--LPGSFGNLSNLRVLNLGNNKFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPC 1085

Query: 286  NLQFVRANGCSSLVTL 301
            NL+ +    C SL ++
Sbjct: 1086 NLEKLNLANCCSLESI 1101



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 31/238 (13%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ +VPSS+  L  L  L L     +++LP  IS L+ ++ +EL  C  LK  P  +  M
Sbjct: 912  SLKQVPSSVGWLNSLLQLKLDSTP-ITTLPEEISQLRFIQKVELRNCLSLKSLPNKIGDM 970

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            + L  LYL+G++I E+P +   L  L LL +N+CKNL +LP+S  GLKSL  L +     
Sbjct: 971  DTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETLV 1030

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            +E +P + G + +L  L++         SS+  + +L+ L    C E     S    LP 
Sbjct: 1031 ME-LPGSFGNLSNLRVLNLGNNKFHSLPSSLKGLSSLKELSLCDCQELTCLPS----LPC 1085

Query: 196  NL-------------------------LGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
            NL                         L  ++C +   +P L  + +L +LD+S C  
Sbjct: 1086 NLEKLNLANCCSLESISDLSELTMLHELNLTNCGIVDDIPGLEHLTALKRLDMSGCNF 1143



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 5/181 (2%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  M  L  LYL+G++I E+P +   L  L LL +  CKNL  LP +   LK L  L + 
Sbjct: 967  IGDMDTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYME 1026

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
              + + + P    ++ +L  L L       +PSS++ L  L+ L L +C+ L  LPS   
Sbjct: 1027 E-TLVMELPGSFGNLSNLRVLNLGNNKFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPC 1085

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
               +L+ LNL+ CC LE++ D L ++  L EL+++   I      +  +  L+ L  SGC
Sbjct: 1086 ---NLEKLNLANCCSLESISD-LSELTMLHELNLTNCGIVDDIPGLEHLTALKRLDMSGC 1141

Query: 181  N 181
            N
Sbjct: 1142 N 1142



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 132/307 (42%), Gaps = 82/307 (26%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLK--GCKNLSSLPVTISSLKC---LRTLELS 60
           DL  +   G  + +VP+S  L   L +L L   G +   S  + I  L+    LR + L 
Sbjct: 601 DLKWIQWRGCPLKDVPASF-LSRQLAVLDLSESGIRGFQSSQLKIVGLQVEGNLRVVNLR 659

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS-- 118
           GC  L+  P + ++ + L KL  +G                       CK LV +PSS  
Sbjct: 660 GCDSLEAIPDL-SNHKSLEKLVFEG-----------------------CKLLVEVPSSVG 695

Query: 119 ----------------------INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
                                 ++GLKSL+ L LSGC  L  +P+ +G +  L+EL +  
Sbjct: 696 NLRSLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGYMLCLKELLLDE 755

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-V 215
           TAI+    SIF ++ L+ L    C       S H                  LP   G +
Sbjct: 756 TAIKNLPGSIFRLEKLQKLSLKSCR------SIH-----------------ELPECIGTL 792

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDC 274
            SL +LDLS   L   ++PS I NL +L++L++    +   +P +I+ L +L+EL + D 
Sbjct: 793 TSLEELDLSSTSL--QSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQEL-IIDG 849

Query: 275 KRLQSLP 281
             ++ LP
Sbjct: 850 SAVEELP 856



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 25/165 (15%)

Query: 643  EPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIE--LLFGLVQLTLNGCKNLER---- 696
            +PG+ S++ +  ++   + +++ DG+ + EL L+++   L  L + +  GCK+L++    
Sbjct: 860  KPGSLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLPCLAKFSAGGCKSLKQVPSS 919

Query: 697  -------------------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE 737
                               LP  IS L+++  + L      +  P      D L  ++LE
Sbjct: 920  VGWLNSLLQLKLDSTPITTLPEEISQLRFIQKVELRNCLSLKSLPNKIGDMDTLHSLYLE 979

Query: 738  GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            G+ I  LP +   L   +L  +  CKNLK LP++  GL+SL  +Y
Sbjct: 980  GSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLY 1024



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 23/147 (15%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L+ L L  C NL      +S LK L  L LSG S     PE       L E+ L+ T
Sbjct: 697 LRSLLHLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGYMLCLKELLLDET 756

Query: 740 AIRGLPASIELLSGNILSNLKDCKN-----------------------LKSLPSTINGLR 776
           AI+ LP SI  L      +LK C++                       L+SLPS+I  L+
Sbjct: 757 AIKNLPGSIFRLEKLQKLSLKSCRSIHELPECIGTLTSLEELDLSSTSLQSLPSSIGNLK 816

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           +L+ ++   C+ L  + +T+ K+ SL+
Sbjct: 817 NLQKLHVMHCASLSKIPDTINKLASLQ 843



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 114/247 (46%), Gaps = 33/247 (13%)

Query: 101 LELLYLNECK---NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L LL +N  +   NL  LPS       LK +   GC  L++VP +      L  LD+S +
Sbjct: 581 LRLLQINHVELQGNLELLPSD------LKWIQWRGC-PLKDVPASFLS-RQLAVLDLSES 632

Query: 158 AIRRPTSS------IFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS 211
            IR   SS      + +  NLR +   GC+   A      H     L    C + + +PS
Sbjct: 633 GIRGFQSSQLKIVGLQVEGNLRVVNLRGCDSLEAIPDLSNHKSLEKLVFEGCKLLVEVPS 692

Query: 212 LTG-VCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEE 268
             G + SL  LDL +C  L E  +  D+  L SL++LYL+  ++   LP +I  +L L+E
Sbjct: 693 SVGNLRSLLHLDLRNCPNLTEFLV--DVSGLKSLEKLYLSGCSSLSVLPENIGYMLCLKE 750

Query: 269 LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG 328
           L L++   +++LP         R      L     +LK CRS + +  CI +L  L +  
Sbjct: 751 LLLDETA-IKNLPG-----SIFRLEKLQKL-----SLKSCRSIHELPECIGTLTSLEELD 799

Query: 329 LAISMLR 335
           L+ + L+
Sbjct: 800 LSSTSLQ 806



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ LP +I  L+ L  L+L       E PE   +   L E+ L  T+++ LP+SI  L  
Sbjct: 758 IKNLPGSIFRLEKLQKLSLKSCRSIHELPECIGTLTSLEELDLSSTSLQSLPSSIGNLKN 817

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS-----------KLKNVTETLGKVESL 802
               ++  C +L  +P TIN L SL+ +   G +            L  + +T+ K+ SL
Sbjct: 818 LQKLHVMHCASLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSLSKIPDTINKLASL 877

Query: 803 E 803
           +
Sbjct: 878 Q 878



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 4/129 (3%)

Query: 666  DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            +G++I EL      L  LV L +N CKNL++LP +   LK L  L +   +   E P   
Sbjct: 979  EGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEE-TLVMELPGSF 1037

Query: 726  SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
             +   L  ++L       LP+S++ LS     +L DC+ L  LPS    L  L +   + 
Sbjct: 1038 GNLSNLRVLNLGNNKFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPCNLEKLNL---AN 1094

Query: 786  CSKLKNVTE 794
            C  L+++++
Sbjct: 1095 CCSLESISD 1103


>gi|108738476|gb|ABG00771.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738440|gb|ABG00753.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738454|gb|ABG00760.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738468|gb|ABG00767.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738484|gb|ABG00775.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738486|gb|ABG00776.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738488|gb|ABG00777.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738490|gb|ABG00778.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738496|gb|ABG00781.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738520|gb|ABG00793.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738526|gb|ABG00796.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738530|gb|ABG00798.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738537|gb|ABG00801.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738539|gb|ABG00802.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738545|gb|ABG00805.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738551|gb|ABG00808.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738442|gb|ABG00754.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|82542041|gb|ABB82028.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 885

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 129/262 (49%), Gaps = 13/262 (4%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           NL  L      L  L+ L LS    L K P + +S   L KL L G +S+ EV  SIE L
Sbjct: 553 NLKELWKGKKILNRLKILNLSHSQHLIKTPNLHSS--SLEKLILKGCSSLVEVHQSIENL 610

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L  L L  C  L  LP  I  +KSLKTLN+SGC +LE +P+ +G +ESL +L   G  
Sbjct: 611 TSLVFLNLKGCWRLKNLPERIGNVKSLKTLNISGCSQLEKLPERMGDMESLTKLLADGIE 670

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCS 217
             +  SSI  +K+ R L   G +  P S+S        L+          LP S     S
Sbjct: 671 NEQFLSSIGQLKHCRRLSLHGDSSTPPSSS--------LISTGVLNWKRWLPASFIEWIS 722

Query: 218 LTKLDLSDCGLGEAAIP-SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           +  L+LS+ GL + A    D   L +L++L L  N F  LP+ I  L  L  L +E CK 
Sbjct: 723 VKHLELSNSGLSDRATNCVDFSGLSALEKLDLTGNKFSRLPSGIGFLPKLTYLSVEGCKY 782

Query: 277 LQSLPQIPPNLQFVRANGCSSL 298
           L S+P +P +L  + A  C SL
Sbjct: 783 LVSIPDLPSSLGHLFACDCKSL 804



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 94/193 (48%), Gaps = 20/193 (10%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L G +S+ EV  SIE LT L  L LKGC  L +LP  I ++K L+TL +SGCS+L
Sbjct: 589 LEKLILKGCSSLVEVHQSIENLTSLVFLNLKGCWRLKNLPERIGNVKSLKTLNISGCSQL 648

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN--------------ECKN 111
           +K P+ +  ME L+KL  DG    +  SSI  L     L L+                 N
Sbjct: 649 EKLPERMGDMESLTKLLADGIENEQFLSSIGQLKHCRRLSLHGDSSTPPSSSLISTGVLN 708

Query: 112 LVR-LPSSINGLKSLKTLNLSGCC---KLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
             R LP+S     S+K L LS      +  N  D  G + +LE+LD++G    R  S I 
Sbjct: 709 WKRWLPASFIEWISVKHLELSNSGLSDRATNCVDFSG-LSALEKLDLTGNKFSRLPSGIG 767

Query: 168 LMKNLRSLYFSGC 180
            +  L  L   GC
Sbjct: 768 FLPKLTYLSVEGC 780



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 57/226 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEF--------PDIVQVLS---DGTDIRELS------ 674
           GR+ VR +SP++PG  +R+W + D +         D+V+ L+     ++ + LS      
Sbjct: 438 GREVVREKSPKQPGERTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAKSLSAGSFAE 497

Query: 675 --------------------LAIELL---------------FGLVQLTLNGCK--NLERL 697
                               L+ EL+               F L  L +   +  NL+ L
Sbjct: 498 MKCLNLLQINGVHLTGSFKLLSKELMWICWLQCPLKYFPSDFTLDNLAVLDMQYSNLKEL 557

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNIL 756
            +    L  L  LNLS      + P + SS   L ++ L+G +++  +  SIE L+  + 
Sbjct: 558 WKGKKILNRLKILNLSHSQHLIKTPNLHSS--SLEKLILKGCSSLVEVHQSIENLTSLVF 615

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            NLK C  LK+LP  I  ++SL+ +  SGCS+L+ + E +G +ESL
Sbjct: 616 LNLKGCWRLKNLPERIGNVKSLKTLNISGCSQLEKLPERMGDMESL 661



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L   + + E+  +IE L  LV L L GC  L+ LP  I  +K L TLN+SG S+  + P
Sbjct: 593 ILKGCSSLVEVHQSIENLTSLVFLNLKGCWRLKNLPERIGNVKSLKTLNISGCSQLEKLP 652

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
           E     + L ++  +G       +SI          LK C+ L
Sbjct: 653 ERMGDMESLTKLLADGIENEQFLSSI--------GQLKHCRRL 687


>gi|108738464|gb|ABG00765.1| disease resistance protein [Arabidopsis thaliana]
 gi|108738466|gb|ABG00766.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 QLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + ++L K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSQLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738448|gb|ABG00757.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|108738541|gb|ABG00803.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 39.3 bits (90), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L  +   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|296080997|emb|CBI18501.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/179 (48%), Positives = 107/179 (59%), Gaps = 2/179 (1%)

Query: 3   SMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           S  +L  L  DG +S+ EV  SI  L  L LL LK CK L   P  I+ +K L+ L  SG
Sbjct: 85  SAPNLEKLIFDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIIN-MKALQILNFSG 143

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CS LKKFP I  +ME+L  LYL   +I E+PSSI  L GL LL L  CKNL  LP+SI  
Sbjct: 144 CSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICK 203

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           LKSL+ L LSGC KLE+ P+ +  +++L+EL + GT I    SSI  +K L  L    C
Sbjct: 204 LKSLEYLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKC 262



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/112 (57%), Positives = 80/112 (71%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L DLYL   +I E+PSSI  LTGL LL LK CKNL SLP +I  LK L  L LSG
Sbjct: 155 GNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSG 214

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           CSKL+ FP+++ +M++L +L LDGT I  +PSSIE L  L LL L +CKNLV
Sbjct: 215 CSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNLV 266



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 93/147 (63%), Gaps = 2/147 (1%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P++ +++ DG + + E+  +I  L  L+ L L  CK L   P  I+ +K L  LN SG S
Sbjct: 87  PNLEKLIFDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIIN-MKALQILNFSGCS 145

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
             ++FP I  + + LL+++L   AI  LP+SI  L+G +L +LK CKNLKSLP++I  L+
Sbjct: 146 GLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLK 205

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESLE 803
           SL  ++ SGCSKL++  E +  +++L+
Sbjct: 206 SLEYLFLSGCSKLESFPEMMENMDNLK 232



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 68/117 (58%), Gaps = 7/117 (5%)

Query: 656 EFPDIVQVLSDGTDIRELSLAIE-------LLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           +FP+I   + +  D+   S+AIE        L GLV L L  CKNL+ LP +I  LK L 
Sbjct: 149 KFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLE 208

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L LSG SK   FPE+  + D L E+ L+GT I  LP+SIE L   IL NL+ CKNL
Sbjct: 209 YLFLSGCSKLESFPEMMENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNL 265



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 125/277 (45%), Gaps = 35/277 (12%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGC-KNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LY  G  +  +PSS       +L+ L  C  +L  L      L+ L T+ LS    
Sbjct: 19  ELRYLYWHGYPLEYLPSS---FNAEDLVELDMCYSSLKQLWENDMLLEKLNTIRLSCSQH 75

Query: 65  LKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           L + P I  S  +L KL  DG +S+ EV  SI  L  L LL L  CK LV  P  IN +K
Sbjct: 76  LIEIPDISISAPNLEKLIFDGCSSLLEVHPSIGKLNKLILLNLKNCKKLVCFPCIIN-MK 134

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           +L+ LN SGC  L+  P+  G +E+L +L ++  AI    SSI  +  L  L    C   
Sbjct: 135 ALQILNFSGCSGLKKFPNIQGNMENLLDLYLASIAIEELPSSIGHLTGLVLLDLKWCKNL 194

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDCGLGEAAIPSDIDNL 240
            +                       LP  T +C L  L+   LS C   E+  P  ++N+
Sbjct: 195 KS-----------------------LP--TSICKLKSLEYLFLSGCSKLES-FPEMMENM 228

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
            +LKEL L+      LP+SI  L  L  L L  CK L
Sbjct: 229 DNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNL 265



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 28/41 (68%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL 41
           M +M +L +L LDGT I  +PSSIE L  L LL L+ CKNL
Sbjct: 225 MENMDNLKELLLDGTPIEVLPSSIERLKVLILLNLRKCKNL 265



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 42/268 (15%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC-KNLVRLPSSINGLKSLKTLNLSGCCK 135
           +L  LY  G  +  +PSS       +L+ L+ C  +L +L  +   L+ L T+ LS    
Sbjct: 19  ELRYLYWHGYPLEYLPSSFN---AEDLVELDMCYSSLKQLWENDMLLEKLNTIRLSCSQH 75

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP-PASASWHLHLP 194
           L  +PD                +I  P        NL  L F GC+       S      
Sbjct: 76  LIEIPDI---------------SISAP--------NLEKLIFDGCSSLLEVHPSIGKLNK 112

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
             LL   +C   +  P +  + +L  L+ S C  G    P+   N+ +L +LYL      
Sbjct: 113 LILLNLKNCKKLVCFPCIINMKALQILNFSGCS-GLKKFPNIQGNMENLLDLYLASIAIE 171

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIP---PNLQFVRANGCSSLVTLFGALKLCRSK 311
            LP+SI  L  L  L+L+ CK L+SLP       +L+++  +GCS L           S 
Sbjct: 172 ELPSSIGHLTGLVLLDLKWCKNLKSLPTSICKLKSLEYLFLSGCSKL----------ESF 221

Query: 312 YTIINCIDSLKLLRKNGLAISMLREYLE 339
             ++  +D+LK L  +G  I +L   +E
Sbjct: 222 PEMMENMDNLKELLLDGTPIEVLPSSIE 249


>gi|356514941|ref|XP_003526160.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 225/519 (43%), Gaps = 71/519 (13%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P S E    +EL+  K   N+  L      L  LR L+LSG   L K P I  ++  L 
Sbjct: 416 LPPSFEPDKLVELILPKS--NIKQLWEGTKPLPNLRRLDLSGSKNLIKMPYIGDALY-LE 472

Query: 80  KLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
            L L+G   + E+  SI L P L  L L  CK+L++LP     L  L+ L L GC KL +
Sbjct: 473 SLDLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLPQFGEDL-ILEKLLLGGCQKLRH 531

Query: 139 V------------------------PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           +                        P+++  + SLE+L++SG +    T  ++ +++   
Sbjct: 532 IDPSIGLLKKLRRLNLKNCKNLVSLPNSILGLNSLEDLNLSGCSKLYNTELLYELRDAEQ 591

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
           L     +  P     H     +   +    V+ ++PS      + +LDLS C L E  IP
Sbjct: 592 LKKIDIDGAPI----HFQSTSSYSREHKKSVSCLMPSSPIFPCMRELDLSFCNLVE--IP 645

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
             I  +  L+ L L+ NNF TLP ++  L  L  L+L+ CK+L+SLP++P          
Sbjct: 646 DAIGIMCCLQRLDLSGNNFATLP-NLKKLSKLVCLKLQHCKQLKSLPELPSR-------- 696

Query: 295 CSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF 354
                 ++   +L ++   I NC + +   R   +A S   +  ++  +    H    V 
Sbjct: 697 ------IYNFDRLRQAGLYIFNCPELVDRERCTDMAFSWTMQSCQVLYIYPFCHVSGGVS 750

Query: 355 PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS----Y 410
           PGS+IP+WF  ++EG+ +++     +++ N  +G A C +F VP  +     F      Y
Sbjct: 751 PGSEIPRWFNNEHEGNCVSLDACPVMHDHN-WIGVAFCAIFVVPHETLSAMCFSETERIY 809

Query: 411 PAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQF---ESNLIRLSFRS 467
           P    +  +D  G+        K     SDH+ L  + R    + F      L RL    
Sbjct: 810 PDFG-DILVDFYGDVDLELVLDK-----SDHMCLFLVKRMDFIYHFHLKHKYLGRLVLE- 862

Query: 468 ISDPTWK-----VKRCGFHPIYMHEVEEFDETTKQSTRF 501
             D  WK     VK+ G+  +Y  ++E       + ++F
Sbjct: 863 -CDDEWKESYAEVKKYGYRWLYEEDIEGPSNPLARKSKF 900



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 7/161 (4%)

Query: 646 NCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           N  +LWE     P++ ++ LS   ++ ++    + L+ L  L L GC  LE +  +I   
Sbjct: 434 NIKQLWEGTKPLPNLRRLDLSGSKNLIKMPYIGDALY-LESLDLEGCIQLEEIGLSIVLS 492

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG--TAIRGLPASIELLSGNILSNLKDC 762
             L++LNL       + P+     D +LE  L G    +R +  SI LL      NLK+C
Sbjct: 493 PKLTSLNLRNCKSLIKLPQF--GEDLILEKLLLGGCQKLRHIDPSIGLLKKLRRLNLKNC 550

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           KNL SLP++I GL SL  +  SGCSKL N TE L ++   E
Sbjct: 551 KNLVSLPNSILGLNSLEDLNLSGCSKLYN-TELLYELRDAE 590


>gi|104647648|gb|ABF74392.1| disease resistance protein [Arabidopsis lyrata]
          Length = 483

 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 169/386 (43%), Gaps = 90/386 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPV-------------- 46
           + SM  L +L LDGT+I+ +P SI  L  LE L+L GC+++  LP               
Sbjct: 67  IGSMPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTSLEDLYLD 126

Query: 47  ---------TISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                    +I  LK L+ L L  C+ L K P  +  +  L KL++ G+++ E+P     
Sbjct: 127 DTALRNLPNSIGDLKNLQKLHLMRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPSS 186

Query: 98  LPGLELLYLNECKNLVRLPSSING------------------------------------ 121
           LP L       CK L ++PSSI G                                    
Sbjct: 187 LPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELMNCE 246

Query: 122 -----------LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLM 169
                      + +L +LNL G   +E +P+  GK+E+L EL +S  T ++R   S   +
Sbjct: 247 FLKFLPKSIGDMDTLCSLNLEGS-NIEELPEEFGKLENLVELRMSNCTMLKRLPESFGDL 305

Query: 170 KNLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SL 212
           K+L  LY   +  +E P S            L  P       N  G S  P  + +P S 
Sbjct: 306 KSLHHLYMKETLVSELPESFGNLSKLMVLEMLKNPLFRISESNAPGTSEEPRFVEVPNSF 365

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
           + + SL +LD     +    IP D++ L SL +L L  N F +LP+S+ GL NL+EL L 
Sbjct: 366 SNLTSLEELDARSWRIS-GKIPDDLEKLSSLMKLNLGNNYFHSLPSSLVGLSNLQELSLR 424

Query: 273 DCKRLQSLPQIPPNLQFVRANGCSSL 298
           DC+ L+ LP +P  L+ +    C SL
Sbjct: 425 DCRELKRLPPLPCKLEHLNMANCFSL 450



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 143/297 (48%), Gaps = 39/297 (13%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + +VP S+  L  L  L L+ C NLS   V +S LKCL  L LSGCS L   P+ + SM 
Sbjct: 12  LVKVPRSVGNLRKLLQLDLRRCSNLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMP 71

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
            L +L LDGT+I+ +P SI  L  LE L L  C++                       L 
Sbjct: 72  CLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTSLEDLYLDDTALR 131

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFLM 169
            LP+SI  LK+L+ L+L  C  L  +PD++ ++ SL++L ++G+A+     +P+S    +
Sbjct: 132 NLPNSIGDLKNLQKLHLMRCTSLSKIPDSINELISLKKLFITGSAVEELPLKPSS----L 187

Query: 170 KNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-LTKLDLSD 225
            +L      GC    + P+S      L    L  +       LP   G    + KL+L +
Sbjct: 188 PSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEA---LPKEIGALHFIRKLELMN 244

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           C   +  +P  I ++ +L  L L  +N   LP     L NL EL + +C  L+ LP+
Sbjct: 245 CEFLK-FLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRLPE 300



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L  C NL      +S LK L  L LSG S     PE   S   L E+ L+GTAI 
Sbjct: 25  LLQLDLRRCSNLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAIS 84

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +L  C++++ LP+ I  L SL  +Y    + L+N+  ++G +++L
Sbjct: 85  NLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLTSLEDLYLDD-TALRNLPNSIGDLKNL 143

Query: 803 E 803
           +
Sbjct: 144 Q 144



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 34/229 (14%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++   G+ + EL L    L  L   +  GCK L             
Sbjct: 155 SKIPDSINELISLKKLFITGSAVEELPLKPSSLPSLTDFSAGGCKFLKQVPSSIGGLNSL 214

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP+ I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 215 LQLQLNTTLIEALPKEIGALHFIRKLELMNCEFLKFLPKSIGDMDTLCSLNLEGSNIEEL 274

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY--PSGCSKLKNVTETLGKVESL 802
           P     L   +   + +C  LK LP +   L+SL  +Y   +  S+L      L K+  L
Sbjct: 275 PEEFGKLENLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETLVSELPESFGNLSKLMVL 334

Query: 803 EV------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           E+      R+S  N P    +   VE     + + L   E L D+ SW+
Sbjct: 335 EMLKNPLFRISESNAPGTSEEPRFVE--VPNSFSNLTSLEEL-DARSWR 380



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 24/140 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S L E     P + ++L DGT I  L  +I  L  L +L+L GC++++ LP  I  L 
Sbjct: 59  NLSVLPENIGSMPCLKELLLDGTAISNLPDSIFRLQKLEKLSLMGCRSIQELPTCIGKLT 118

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L                         +++L+ TA+R LP SI  L      +L  C +L
Sbjct: 119 SLE------------------------DLYLDDTALRNLPNSIGDLKNLQKLHLMRCTSL 154

Query: 766 KSLPSTINGLRSLRMMYPSG 785
             +P +IN L SL+ ++ +G
Sbjct: 155 SKIPDSINELISLKKLFITG 174


>gi|297741885|emb|CBI33320.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 26/225 (11%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL RLP  I   K L+TL+ +GC KLE  P+  G +  L  LD+SGT
Sbjct: 431 VPNLEILTLEGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGT 490

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI  +  L++L    C      A  H  +P ++   SS  V            
Sbjct: 491 AIMDLPSSITHLNGLQTLLLQEC------AKLH-KIPIHICHLSSLEV------------ 531

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
              LDL  C + E  IPSDI +L SL++L L R +F ++P +I+ L  LE L L  C  L
Sbjct: 532 ---LDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNL 588

Query: 278 QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLK 322
           + +P++P  L+ + A+G +   +    L L    ++++NC   ++
Sbjct: 589 EQIPELPSRLRLLDAHGSNRTSSRAPFLPL----HSLVNCFSRVQ 629



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 89/152 (58%), Gaps = 1/152 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+LTL+GC NL  LP  I   K L+TL  +GCSKL++FP+I  +M +L  L L GT+I 
Sbjct: 434 LEILTLEGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIM 493

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE-NVPDTLGKVES 148
           ++PSSI  L GL+ L L EC  L ++P  I  L SL+ L+L  C  +E  +P  +  + S
Sbjct: 494 DLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSS 553

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           L++L++         ++I  +  L  L  S C
Sbjct: 554 LQKLNLERGHFSSIPTTINQLSRLEVLNLSHC 585



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 80/153 (52%), Gaps = 9/153 (5%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLERLPR I   K+L TL+ +G SK   FPEI  +  +L  + L GTAI  LP
Sbjct: 437 LTLEGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLP 496

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
           +SI  L+G     L++C  L  +P  I  L SL ++    C    N+ E  G + S    
Sbjct: 497 SSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGHC----NIME--GGIPSDICH 550

Query: 806 LSSWNRPKMQNDFDCVEQSAVETVTKLAKAELL 838
           LSS  +  ++        S   T+ +L++ E+L
Sbjct: 551 LSSLQKLNLERGH---FSSIPTTINQLSRLEVL 580



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 1/116 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M++L  L L GT+I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 477 GNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECAKLHKIPIHICHLSSLEVLDLGH 536

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           C+ ++   P  +  +  L KL L+    + +P++I  L  LE+L L+ C NL ++P
Sbjct: 537 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHCSNLEQIP 592


>gi|357499823|ref|XP_003620200.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355495215|gb|AES76418.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1437

 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 165/366 (45%), Gaps = 47/366 (12%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +T +P S    T   L+ L   K+  ++       + L  +  S C  L K P + A+  
Sbjct: 623 LTSLPDSFHPKT---LVVLNLPKSHITMDEPFKKFEHLTFMNFSDCDSLTKLPDVSAT-P 678

Query: 77  DLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           +L+++ ++   ++ ++  SI  L  L  L    C NL   P  +   K L+ LNL  C  
Sbjct: 679 NLTRILVNNCENLVDIHESIGDLDKLVTLSTEGCPNLKSFPRGLRS-KYLEYLNLRKCSS 737

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLHLP 194
           ++N PD L KVE+++ +D+ GTAI++  SSI   K L  L  + C N     ++  +   
Sbjct: 738 IDNFPDVLAKVENMKNIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQN 797

Query: 195 FNLLGKSSCPV--ALMLPSLTGVCS-----LTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
            + L    CP    L+  SL    +     L+ L L +C L +  +   +     LK L 
Sbjct: 798 IDELNVEGCPQLPKLLWKSLENRTTDWLPKLSNLSLKNCNLSDEDLELILKCFLQLKWLI 857

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
           L+ NNF+T+P  I  L +L  L +E+CK L+ +  +PP LQ++ A  C +L      + L
Sbjct: 858 LSDNNFLTIPVCIKDLSHLLLLNIENCKHLRDISVLPPYLQYIDARMCMALTPHSSEVLL 917

Query: 308 CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQN 367
            ++   +                     EY++            IV P ++IP WF + N
Sbjct: 918 SQAFQEV---------------------EYID------------IVVPRTKIPSWFDHCN 944

Query: 368 EGSSIT 373
           +G SI+
Sbjct: 945 KGESIS 950



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++ ++  SI  L  L  L+ +GC NL S P  + S K L  L L  CS +  FP ++A +
Sbjct: 690 NLVDIHESIGDLDKLVTLSTEGCPNLKSFPRGLRS-KYLEYLNLRKCSSIDNFPDVLAKV 748

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E++  + + GT+I + PSSIE   GLE L L  C N+  LPS+ +  +++  LN+ GC +
Sbjct: 749 ENMKNIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQNIDELNVEGCPQ 808

Query: 136 L 136
           L
Sbjct: 809 L 809



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 14/163 (8%)

Query: 658 PDIVQVLSDG----TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLS 713
           P++ ++L +      DI E   +I  L  LV L+  GC NL+  PR + + KYL  LNL 
Sbjct: 678 PNLTRILVNNCENLVDIHE---SIGDLDKLVTLSTEGCPNLKSFPRGLRS-KYLEYLNLR 733

Query: 714 GLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
             S    FP++ +  + +  I + GTAI+  P+SIE   G     L  C N++ LPS  +
Sbjct: 734 KCSSIDNFPDVLAKVENMKNIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTD 793

Query: 774 GLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQN 816
             +++  +   GC +L  +       +SLE R + W  PK+ N
Sbjct: 794 MFQNIDELNVEGCPQLPKLL-----WKSLENRTTDW-LPKLSN 830



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 11/148 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A ++++ ++ + GT+I + PSSIE   GLE L L  C N+  LP      + +  L + 
Sbjct: 745 LAKVENMKNIDIGGTAIKKFPSSIENFKGLEELVLTSCSNVEDLPSNTDMFQNIDELNVE 804

Query: 61  GCSKLKKFPQIVASMED--------LSKLYLDGTSIAEVPSSIELLPGLELLYLN-ECKN 111
           GC +L K   +  S+E+        LS L L   ++++    + L   L+L +L     N
Sbjct: 805 GCPQLPKL--LWKSLENRTTDWLPKLSNLSLKNCNLSDEDLELILKCFLQLKWLILSDNN 862

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENV 139
            + +P  I  L  L  LN+  C  L ++
Sbjct: 863 FLTIPVCIKDLSHLLLLNIENCKHLRDI 890



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSD--GTD-IRELSLAIELLFGLVQLTL 688
           G+   R++SP +P    RLW       D+++VL++  GTD I  + L +  L   VQL  
Sbjct: 528 GKDIARKESPFDPSKRRRLWHHE----DVLEVLTENMGTDTIEGIVLDMPNLKQEVQLKA 583

Query: 689 NGCKNLERLPRTISALKYLSTL--NLSG---LSKFREFPEITSSRDQLLEIHLEGTAIRG 743
           N   +++RL   I     +S    NL     L ++ ++P +TS  D     H +   +  
Sbjct: 584 NTFDDMKRLRILIVRNGQVSGAPQNLPNNLRLLEWNKYP-LTSLPDSF---HPKTLVVLN 639

Query: 744 LPAS-------IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
           LP S        +        N  DC +L  LP  ++   +L  +  + C  L ++ E++
Sbjct: 640 LPKSHITMDEPFKKFEHLTFMNFSDCDSLTKLPD-VSATPNLTRILVNNCENLVDIHESI 698

Query: 797 GKVESLEVRLSSWNRPKMQ 815
           G ++ L V LS+   P ++
Sbjct: 699 GDLDKL-VTLSTEGCPNLK 716


>gi|108738560|gb|ABG00812.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 168/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L  LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYILNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+E  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQEFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYILNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYILNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 27/168 (16%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D T ++ L  +I  L  L  L L  C +L ++P +I+ LK L  L ++G S   E P   
Sbjct: 202 DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFING-SAVEELPLKP 260

Query: 726 SSRDQLLEIH------------------------LEGTAIRGLPASIELLSGNILSNLKD 761
           SS   L +                          L  T I  LP  I  L       L++
Sbjct: 261 SSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRN 320

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           CK LK LP +I  + +L ++   G S ++ + E  GK+E L E+R+S+
Sbjct: 321 CKFLKFLPKSIGDMDTLYILNLEG-SNIEELPEEFGKLEKLVELRMSN 367


>gi|357486941|ref|XP_003613758.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515093|gb|AES96716.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1095

 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 170/395 (43%), Gaps = 96/395 (24%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M+   +L  L+LD   S+ EV  SI  L  LE L L  C +L+ LP  I+ L  L+T+ L
Sbjct: 651 MSGAPNLKKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGIN-LPSLKTMSL 709

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C+ +K FP+I+  ME++  L L  + I+E+P SI LL GL  L ++ C  L+ LPSSI
Sbjct: 710 RNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLELPSSI 769

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L  L+TL    C  L  +    G+V                                 
Sbjct: 770 FMLPKLETLEAYCCRGLARIKKRKGQV--------------------------------- 796

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
               P +      LP ++   SSC V               +DLS C L    + + +  
Sbjct: 797 ----PET------LPSDVRNASSCLVH------------RDVDLSFCYLPYEFLATLLPF 834

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
           LH +  + L+ ++   LP+SI+   +L +L + +C  L+ +  +PPN++ + A  C SL 
Sbjct: 835 LHYVTNISLDYSSITILPSSINACYSLMKLTMNNCTELREIRGLPPNIKHLGAINCESLT 894

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           +        +SK  ++N     ++L  +G+                      I++PGS I
Sbjct: 895 S--------QSKEMLLN-----QMLLNSGIKY--------------------IIYPGSSI 921

Query: 360 PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
           P WF  +      T  +    +  NK+   A+C V
Sbjct: 922 PSWFHQR------TCEQSQSFWFRNKLPEMALCLV 950



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 1/128 (0%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +I  L  L  L LN C +L  LP  I+ L  L T++L   +  + FPEI    + +
Sbjct: 670 EVHDSIGFLEKLEDLNLNYCTSLTILPYGIN-LPSLKTMSLRNCTTVKNFPEILGKMENI 728

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
             + L  + I  LP SI LL G +   +  C  L  LPS+I  L  L  +    C  L  
Sbjct: 729 KYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLELPSSIFMLPKLETLEAYCCRGLAR 788

Query: 792 VTETLGKV 799
           + +  G+V
Sbjct: 789 IKKRKGQV 796



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 65/232 (28%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSD--GTDIRELSLAIELLFGLVQLTLN 689
           GR+ VR +SP +PG  SRLW   D    I+ VL +  G+D  E+ +   L    VQ   N
Sbjct: 503 GREIVRLESPSKPGGRSRLWFTKD----ILHVLKENKGSDKTEIIVLNLLKDKEVQWDGN 558

Query: 690 GCKNLE-----------------RLPRTISALKY----------------LSTLNLSG-- 714
             KN+E                  LP+++  LK+                L  L+LS   
Sbjct: 559 ALKNMENLKILVIEKTRFSRGPNHLPKSLRVLKWFDYPESSLPAHYNPKKLVILDLSDST 618

Query: 715 ---------LSKFREFPEITSSRDQ-------------LLEIHLEG-TAIRGLPASIELL 751
                    + KF+   E+  S+ Q             L ++HL+   ++  +  SI  L
Sbjct: 619 GLFTFGNQMIMKFKSLKEMKISKCQSLKKVPDMSGAPNLKKLHLDSCKSLVEVHDSIGFL 678

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
                 NL  C +L  LP  IN L SL+ M    C+ +KN  E LGK+E+++
Sbjct: 679 EKLEDLNLNYCTSLTILPYGIN-LPSLKTMSLRNCTTVKNFPEILGKMENIK 729


>gi|357513699|ref|XP_003627138.1| Resistance protein [Medicago truncatula]
 gi|355521160|gb|AET01614.1| Resistance protein [Medicago truncatula]
          Length = 1050

 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 215/476 (45%), Gaps = 55/476 (11%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L  L T+ LS C KL K P +  +++ L  LYL G  S+  +   I     L  + L+ C
Sbjct: 498 LVSLETINLSECKKLIKLPDLSRAIK-LKCLYLSGCQSLCAIEPHIFSKDTLVTVLLDRC 556

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           + L  L S    L+ L+ +N++GC +L+         +S+E LD+S T I+   SSI  M
Sbjct: 557 EKLQSLKSE-KHLRYLEKINVNGCSQLKEFSVF---SDSIESLDLSNTGIKILQSSIGRM 612

Query: 170 KNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
           + L  L   G    N P   ++        L   +    + +     G+ SLT+L L DC
Sbjct: 613 RKLVWLNLEGLRLKNLPNELSNLRSLTELWLCNCNIVTTSKLESIFDGLESLTRLYLKDC 672

Query: 227 GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
                 IP++I +L SL EL L+ ++   LPA+I  +L LE + L++C +L+ LP++PP+
Sbjct: 673 RYL-IEIPANISSLSSLYELRLDGSSVKFLPANIKYVLRLEIISLDNCTKLRILPELPPH 731

Query: 287 LQFVRANGCSSLVTL------FGALKLCRSKYTIINCI------------DSLKLLRKNG 328
           ++   A  C+SLVT+       G++       +  NC             D++  ++   
Sbjct: 732 IKEFHAENCTSLVTISTLKTFSGSMNGKDIYISFKNCTSLDGPSLHGNLEDAISTMKSAA 791

Query: 329 LAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVG 388
               ++R+Y  LQ  +   ++     PG ++P+ F YQ + S I +      Y+    +G
Sbjct: 792 FHNILVRKY-SLQTRNYNYNRAEFCLPGRRVPRQFQYQTKESCINIELSKLSYS----LG 846

Query: 389 FAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGH-----VVSDHLW 443
           F    +   P  +T    F+     + +C    S +   + +  K+ H     + SDH++
Sbjct: 847 FIFSVIIAPPPINT----FNDGLTIQCQCY---SKDRKMVGYASKWHHKNTTRLNSDHIF 899

Query: 444 LLFLPRHGH--------NWQFESNLIRLSFRSISDP--TWKVKRCGFHPIYMHEVE 489
           + + P            N  FE ++  +S   + +   T  +K CG  PIY  E +
Sbjct: 900 VWYDPYISDIIWESDETNVTFEFSVSTVSAEGVYNNFMTVTMKECGICPIYFSEFQ 955



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 2/118 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--NLSSLPVTISSLKCLRTLE 58
           +  M+ L  L L+G  +  +P+ +  L  L  L L  C     S L      L+ L  L 
Sbjct: 609 IGRMRKLVWLNLEGLRLKNLPNELSNLRSLTELWLCNCNIVTTSKLESIFDGLESLTRLY 668

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           L  C  L + P  ++S+  L +L LDG+S+  +P++I+ +  LE++ L+ C  L  LP
Sbjct: 669 LKDCRYLIEIPANISSLSSLYELRLDGSSVKFLPANIKYVLRLEIISLDNCTKLRILP 726



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 54/214 (25%)

Query: 30  LELLTLKGCKNLSSLPVTISS-----------------------LKCLRTLELSGCSKLK 66
           L+ L L GC++L ++   I S                       L+ L  + ++GCS+LK
Sbjct: 524 LKCLYLSGCQSLCAIEPHIFSKDTLVTVLLDRCEKLQSLKSEKHLRYLEKINVNGCSQLK 583

Query: 67  KFPQIVASME--DLSK------------------LYLDGTSIAEVPSSIELLPGLELLYL 106
           +F     S+E  DLS                   L L+G  +  +P+ +  L  L  L+L
Sbjct: 584 EFSVFSDSIESLDLSNTGIKILQSSIGRMRKLVWLNLEGLRLKNLPNELSNLRSLTELWL 643

Query: 107 NECKNLV---RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
             C N+V   +L S  +GL+SL  L L  C  L  +P  +  + SL EL + G++++   
Sbjct: 644 CNC-NIVTTSKLESIFDGLESLTRLYLKDCRYLIEIPANISSLSSLYELRLDGSSVKFLP 702

Query: 164 SSIFLMKNLRSLYFSGCNE-------PPASASWH 190
           ++I  +  L  +    C +       PP    +H
Sbjct: 703 ANIKYVLRLEIISLDNCTKLRILPELPPHIKEFH 736



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 10/134 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV + L+ C+ L+ L ++   L+YL  +N++G S+ +EF   + S + L    L  T I+
Sbjct: 548 LVTVLLDRCEKLQSL-KSEKHLRYLEKINVNGCSQLKEFSVFSDSIESL---DLSNTGIK 603

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L +SI  +   +  NL+  + LK+LP+ ++ LRSL  ++   C+ +     T  K+ES+
Sbjct: 604 ILQSSIGRMRKLVWLNLEGLR-LKNLPNELSNLRSLTELWLCNCNIV-----TTSKLESI 657

Query: 803 EVRLSSWNRPKMQN 816
              L S  R  +++
Sbjct: 658 FDGLESLTRLYLKD 671


>gi|108738498|gb|ABG00782.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +I  LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL++  L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQDFSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  ++G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSIGDLKNL 219

Query: 803 E----VRLSSWNR 811
           +    VR +S ++
Sbjct: 220 QDLHLVRCTSLSK 232



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 13/161 (8%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  LP     L  
Sbjct: 300 IEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEK 359

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV--------- 804
            +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V         
Sbjct: 360 LVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMVLEMLKKPLF 418

Query: 805 RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
           R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 419 RISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +I  LK L  L+L   +   + P+       L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSIYELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284


>gi|108738444|gb|ABG00755.1| disease resistance protein [Arabidopsis thaliana]
          Length = 544

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 169/385 (43%), Gaps = 89/385 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           + +M  L +L LDGT+I  +P SI  L  LE+L+L+GCK                     
Sbjct: 144 IGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDD 203

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP------ 92
             L +LP +   LK L+ L L  C+ L K P  +  ++ L KL+++G+++ E+P      
Sbjct: 204 TALKNLPSSXGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSSL 263

Query: 93  ----------------------------------SSIELLPG-------LELLYLNECKN 111
                                             + IE LP        +  L L  CK 
Sbjct: 264 PSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKF 323

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMK 170
           L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++R   S   +K
Sbjct: 324 LKFLPKSIGDMDTLYSLNLEG-SNIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLK 382

Query: 171 NLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCPVALMLP-SLT 213
           +L  LY   +  +E P S            L  P       N+ G S  P  + +P S +
Sbjct: 383 SLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFS 442

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L NL+EL L D
Sbjct: 443 KLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRD 501

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSL 298
           C+ L+ LP +P  L+ +    C SL
Sbjct: 502 CRELKRLPPLPCKLEQLNLANCFSL 526



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 144/300 (48%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK----------------------NL 112
           M  L +L LDGT+I  +P SI  L  LE+L L  CK                       L
Sbjct: 147 MTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLKSLEKLYLDDTAL 206

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
             LPSS   LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 KNLPSSXGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 12/157 (7%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L+ CK ++ LP  I  L+SL  +Y    + LKN+  + G +++L
Sbjct: 162 NLPESINRLQNLEILSLRGCK-IQELPLCIGTLKSLEKLYLDD-TALKNLPSSXGDLKNL 219

Query: 803 E----VRLSSWNR-PKMQNDFDCVEQ-----SAVETV 829
           +    VR +S ++ P   N+   +++     SAVE +
Sbjct: 220 QDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVEEL 256



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 22/150 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK------------ 692
            + S L E       + ++L DGT I+ L  +I  L  L  L+L GCK            
Sbjct: 135 SDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCKIQELPLCIGTLK 194

Query: 693 ----------NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
                      L+ LP +   LK L  L+L   +   + P+  +    L ++ + G+A+ 
Sbjct: 195 SLEKLYLDDTALKNLPSSXGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 254

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            LP     L      +  DCK LK +PS+I
Sbjct: 255 ELPLKPSSLPSLYDFSAGDCKFLKQVPSSI 284


>gi|357474805|ref|XP_003607688.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508743|gb|AES89885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1353

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 198/464 (42%), Gaps = 98/464 (21%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            LR L+LS      K P       +L +L L+G   + ++ SSI LL  L  L LN+CK++
Sbjct: 962  LRNLDLSYSQNFIKMPHF-GEFPNLERLDLEGCIKLVQLDSSIRLLTKLVYLNLNDCKSI 1020

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
            + L S+I GL  L  LN+S                +   L++S +  +  TSSIF     
Sbjct: 1021 ISLISNIFGLGCLDDLNMS---------------YNPRHLNISASHSQSRTSSIF----- 1060

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
                            W + LP+  L  +      + PS  G   L +LD+S CGL +  
Sbjct: 1061 ---------------RW-ITLPYQYLFPTPTTHTNLFPSWHG---LRELDISFCGLCQ-- 1099

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            IP+ I  L+ L  L +  NNFVT+P S   L  L  L LE   +L+SLP++P +  F   
Sbjct: 1100 IPNSIGCLYWLVGLNVGGNNFVTVP-SPRELSKLVYLNLEHRPQLKSLPKLPSHTAFEHD 1158

Query: 293  NGCSSL--------VTLFGALKLCRSKYTIINCIDS--LKLLRKNGLAISMLREYLELQA 342
               +SL        + +F    L   ++   N   S  ++L++ N             Q+
Sbjct: 1159 YFSNSLGVTQWLTGLLIFNCPNLGEREHCCTNMTFSWMIQLIQANP------------QS 1206

Query: 343  VSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLY-NVNKVVGFAICCVFQV-PKH 400
              D    + IV PGS+IP WF  QN+G SI +     ++ N N ++G   C VF + P H
Sbjct: 1207 FPDCYDIIQIVTPGSEIPSWFNNQNKGDSIRLDSSPIMHDNNNNIIGCICCVVFSIAPHH 1266

Query: 401  STGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHN---WQFE 457
             T   +  S P+                  RG+       ++ L F   HG     W   
Sbjct: 1267 PT---MIRSSPS------------------RGQ------AYMGLRFTDIHGQERSAWDVL 1299

Query: 458  SNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRF 501
            +  + +   +  D   +VK CG+H +Y  +++E      +S +F
Sbjct: 1300 NETLYVETENCEDLGIEVKNCGYHWVYEEDLQESKLNKDESQKF 1343


>gi|168030211|ref|XP_001767617.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681146|gb|EDQ67576.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 556

 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 112/309 (36%), Positives = 156/309 (50%), Gaps = 33/309 (10%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M ++  L  LYL G  S+  +P S+  L  L  L L GC++L +LP ++ +L  L  L L
Sbjct: 27  MGNLNSLVKLYLYGCRSLKALPESMGNLNSLVELDLGGCESLDALPESMDNLNSLVELNL 86

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GC  L+  P+ + ++  L KL L G  S+  +P S+  L  L  LYL+ C++L  LP S
Sbjct: 87  GGCESLEALPESMGNLNSLVKLDLYGCESLEALPESMGNLNSLVKLYLHGCRSLKALPES 146

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSLY 176
           +  L SL  L+L GC  LE +P+++G + SL ELD+ G    +  P S    M NL SL 
Sbjct: 147 MGNLNSLVELDLRGCESLEALPESMGNLNSLVELDLYGCGSLKALPES----MGNLNSL- 201

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPS 235
                           +  NL G   C     LP S+  + SL KLDL  C   E A+P 
Sbjct: 202 ----------------VELNLYG---CGSLEALPESMGNLNSLVKLDLRGCKTLE-ALPE 241

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRAN- 293
            I NL +LK       +   LP SI  L +L +L+L  CK L++LP+   NL   V+ N 
Sbjct: 242 SIGNLKNLKFNLGVCQSLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNL 301

Query: 294 -GCSSLVTL 301
            GC SL  L
Sbjct: 302 YGCRSLEAL 310



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 148/297 (49%), Gaps = 15/297 (5%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P SI  L  L  L L+ CK+L +LP +I +L  L  L L GC  L+  P+ + ++
Sbjct: 258 SLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPESIGNL 317

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L  L L G  S+  +P SI  L  L  LYL  C +L  LP SI  L SL  LNL  C 
Sbjct: 318 NSLVDLNLYGCVSLKALPESIGNLNSLLDLYLYTCGSLKALPESIGNLNSLVKLNLGVCQ 377

Query: 135 KLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPA----SASW 189
            LE + +++G   SL +LD+    +++    SI  + +L  L   GC    A      + 
Sbjct: 378 SLEALLESIGNFNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCQSLEALQESIGNL 437

Query: 190 HLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
           +  +  NL G   C     LP S+  + SL  LDL  CG    A+P  I NL+SL +  L
Sbjct: 438 NSLVDLNLYG---CVSLKALPESIGNLNSLMDLDLYTCG-SLKALPESIGNLNSLVKFNL 493

Query: 249 NR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRAN--GCSSLVTL 301
               +   LP SI  L +L +L+L  CK L++LP+   NL   V+ N  GC SL  L
Sbjct: 494 GVCQSLEALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEAL 550



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 34/263 (12%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
           C++L +LP ++ +L  L  L L GC  LK  P+ + ++  L +L L G            
Sbjct: 17  CRSLKALPKSMGNLNSLVKLYLYGCRSLKALPESMGNLNSLVELDLGG------------ 64

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
                      C++L  LP S++ L SL  LNL GC  LE +P+++G + SL +LD+ G 
Sbjct: 65  -----------CESLDALPESMDNLNSLVELNLGGCESLEALPESMGNLNSLVKLDLYGC 113

Query: 158 -AIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLP-S 211
            ++     S+  + +L  LY  GC      P +  + +  +  +L G   C     LP S
Sbjct: 114 ESLEALPESMGNLNSLVKLYLHGCRSLKALPESMGNLNSLVELDLRG---CESLEALPES 170

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELE 270
           +  + SL +LDL  CG    A+P  + NL+SL EL L    +   LP S+  L +L +L+
Sbjct: 171 MGNLNSLVELDLYGCG-SLKALPESMGNLNSLVELNLYGCGSLEALPESMGNLNSLVKLD 229

Query: 271 LEDCKRLQSLPQIPPNLQFVRAN 293
           L  CK L++LP+   NL+ ++ N
Sbjct: 230 LRGCKTLEALPESIGNLKNLKFN 252



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 136/286 (47%), Gaps = 27/286 (9%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L  L L G  S+  +P SI  L  L  L L GC +L +LP +I +L  L  L L
Sbjct: 290 IGNLNSLVKLNLYGCRSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLLDLYL 349

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  LK  P+ + ++  L KL L    S+  +  SI     L  L L  CK+L  LP S
Sbjct: 350 YTCGSLKALPESIGNLNSLVKLNLGVCQSLEALLESIGNFNSLVKLDLRVCKSLKALPES 409

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I  L SL  LNL GC  LE + +++G + SL +L++ G  +++    SI  + +L  L  
Sbjct: 410 IGNLNSLVKLNLYGCQSLEALQESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLMDLDL 469

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
             C    A       LP                S+  + SL K +L  C   E A+P  I
Sbjct: 470 YTCGSLKA-------LP---------------ESIGNLNSLVKFNLGVCQSLE-ALPKSI 506

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            NL+SL +L L    +   LP SI  L +L +L L  C+ L++LP+
Sbjct: 507 GNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPK 552



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 28/203 (13%)

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRP 162
           L++ +C++L  LP S+  L SL  L L GC  L+ +P+++G + SL ELD+ G  ++   
Sbjct: 12  LHVADCRSLKALPKSMGNLNSLVKLYLYGCRSLKALPESMGNLNSLVELDLGGCESLDAL 71

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
             S+  + +L  L   GC    A       LP                S+  + SL KLD
Sbjct: 72  PESMDNLNSLVELNLGGCESLEA-------LP---------------ESMGNLNSLVKLD 109

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L  C   E A+P  + NL+SL +LYL+   +   LP S+  L +L EL+L  C+ L++LP
Sbjct: 110 LYGCESLE-ALPESMGNLNSLVKLYLHGCRSLKALPESMGNLNSLVELDLRGCESLEALP 168

Query: 282 QIPPNLQ-FVRAN--GCSSLVTL 301
           +   NL   V  +  GC SL  L
Sbjct: 169 ESMGNLNSLVELDLYGCGSLKAL 191



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 79/140 (56%), Gaps = 1/140 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           ++D   ++ L  ++  L  LV+L L GC++L+ LP ++  L  L  L+L G       PE
Sbjct: 14  VADCRSLKALPKSMGNLNSLVKLYLYGCRSLKALPESMGNLNSLVELDLGGCESLDALPE 73

Query: 724 ITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              + + L+E++L G  ++  LP S+  L+  +  +L  C++L++LP ++  L SL  +Y
Sbjct: 74  SMDNLNSLVELNLGGCESLEALPESMGNLNSLVKLDLYGCESLEALPESMGNLNSLVKLY 133

Query: 783 PSGCSKLKNVTETLGKVESL 802
             GC  LK + E++G + SL
Sbjct: 134 LHGCRSLKALPESMGNLNSL 153



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           LV+L L GC++LE LP ++  L  L  L+L G       PE   + + L++++L G  ++
Sbjct: 81  LVELNLGGCESLEALPESMGNLNSLVKLDLYGCESLEALPESMGNLNSLVKLYLHGCRSL 140

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP S+  L+  +  +L+ C++L++LP ++  L SL  +   GC  LK + E++G + S
Sbjct: 141 KALPESMGNLNSLVELDLRGCESLEALPESMGNLNSLVELDLYGCGSLKALPESMGNLNS 200

Query: 802 L 802
           L
Sbjct: 201 L 201



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 2/146 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L  L L G  S+  +  SI  L  L  L L GC +L +LP +I +L  L  L+L
Sbjct: 410 IGNLNSLVKLNLYGCQSLEALQESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLMDLDL 469

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  LK  P+ + ++  L K  L    S+  +P SI  L  L  L L  CK+L  LP S
Sbjct: 470 YTCGSLKALPESIGNLNSLVKFNLGVCQSLEALPKSIGNLNSLVKLDLRVCKSLKALPES 529

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLG 144
           I  L SL  LNL GC  LE +P ++G
Sbjct: 530 IGNLNSLVKLNLYGCRSLEALPKSIG 555



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           LV+L L+GC++L+ LP ++  L  L  L+L G       PE   + + L+E+ L G  ++
Sbjct: 129 LVKLYLHGCRSLKALPESMGNLNSLVELDLRGCESLEALPESMGNLNSLVELDLYGCGSL 188

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP S+  L+  +  NL  C +L++LP ++  L SL  +   GC  L+ + E++G +++
Sbjct: 189 KALPESMGNLNSLVELNLYGCGSLEALPESMGNLNSLVKLDLRGCKTLEALPESIGNLKN 248

Query: 802 LEVRL 806
           L+  L
Sbjct: 249 LKFNL 253



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 3/162 (1%)

Query: 650 LWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           L E    F  +V++ L     ++ L  +I  L  LV+L L GC++LE L  +I  L  L 
Sbjct: 382 LLESIGNFNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCQSLEALQESIGNLNSLV 441

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKS 767
            LNL G    +  PE   + + L+++ L    +++ LP SI  L+  +  NL  C++L++
Sbjct: 442 DLNLYGCVSLKALPESIGNLNSLMDLDLYTCGSLKALPESIGNLNSLVKFNLGVCQSLEA 501

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
           LP +I  L SL  +    C  LK + E++G + SL V+L+ +
Sbjct: 502 LPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSL-VKLNLY 542



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 2/141 (1%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV+L L GC++LE LP +I  L  L  LNL G    +  PE   + +
Sbjct: 283 LKALPESIGNLNSLVKLNLYGCRSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLN 342

Query: 730 QLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            LL+++L    +++ LP SI  L+  +  NL  C++L++L  +I    SL  +    C  
Sbjct: 343 SLLDLYLYTCGSLKALPESIGNLNSLVKLNLGVCQSLEALLESIGNFNSLVKLDLRVCKS 402

Query: 789 LKNVTETLGKVESLEVRLSSW 809
           LK + E++G + SL V+L+ +
Sbjct: 403 LKALPESIGNLNSL-VKLNLY 422



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 2/121 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           LV+L L GC++LE LP ++  L  L  L+L G    +  PE   + + L+E++L G  ++
Sbjct: 153 LVELDLRGCESLEALPESMGNLNSLVELDLYGCGSLKALPESMGNLNSLVELNLYGCGSL 212

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP S+  L+  +  +L+ CK L++LP +I  L++L+      C  L+ + +++G + S
Sbjct: 213 EALPESMGNLNSLVKLDLRGCKTLEALPESIGNLKNLKFNLGV-CQSLEALPKSIGNLNS 271

Query: 802 L 802
           L
Sbjct: 272 L 272



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAI 741
           LV+L L GCK LE LP +I  LK L   NL         P+   + + L+++ L    ++
Sbjct: 225 LVKLDLRGCKTLEALPESIGNLKNL-KFNLGVCQSLEALPKSIGNLNSLVKLDLRVCKSL 283

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP SI  L+  +  NL  C++L++LP +I  L SL  +   GC  LK + E++G + S
Sbjct: 284 KALPESIGNLNSLVKLNLYGCRSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLNS 343

Query: 802 L 802
           L
Sbjct: 344 L 344



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L  CK+L+ LP +I  L  L  LNL G       PE   + + L++++L G  ++
Sbjct: 272 LVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPESIGNLNSLVDLNLYGCVSL 331

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP SI  L+  +   L  C +LK+LP +I  L SL  +    C  L+ + E++G   S
Sbjct: 332 KALPESIGNLNSLLDLYLYTCGSLKALPESIGNLNSLVKLNLGVCQSLEALLESIGNFNS 391

Query: 802 L 802
           L
Sbjct: 392 L 392



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  LV L +  C++L+ LP+++  L  L  L L G    +  PE   + + L+E+ L G 
Sbjct: 6   LHKLVSLHVADCRSLKALPKSMGNLNSLVKLYLYGCRSLKALPESMGNLNSLVELDLGGC 65

Query: 740 -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            ++  LP S++ L+  +  NL  C++L++LP ++  L SL  +   GC  L+ + E++G 
Sbjct: 66  ESLDALPESMDNLNSLVELNLGGCESLEALPESMGNLNSLVKLDLYGCESLEALPESMGN 125

Query: 799 VESL 802
           + SL
Sbjct: 126 LNSL 129



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L L GC +LE LP ++  L  L  L+L G       PE   +   L        ++ 
Sbjct: 201 LVELNLYGCGSLEALPESMGNLNSLVKLDLRGCKTLEALPESIGNLKNLKFNLGVCQSLE 260

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L+  +  +L+ CK+LK+LP +I  L SL  +   GC  L+ + E++G + SL
Sbjct: 261 ALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPESIGNLNSL 320



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 1/116 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAI 741
           LV L L GC +L+ LP +I  L  L  L+L      +  PE   + + L++ +L    ++
Sbjct: 440 LVDLNLYGCVSLKALPESIGNLNSLMDLDLYTCGSLKALPESIGNLNSLVKFNLGVCQSL 499

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             LP SI  L+  +  +L+ CK+LK+LP +I  L SL  +   GC  L+ + +++G
Sbjct: 500 EALPKSIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPKSIG 555


>gi|357500587|ref|XP_003620582.1| Elongation factor Ts [Medicago truncatula]
 gi|355495597|gb|AES76800.1| Elongation factor Ts [Medicago truncatula]
          Length = 1245

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 226/496 (45%), Gaps = 77/496 (15%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            DG     +P+S      +EL+ +    ++  L      L  LR L LS   KL K     
Sbjct: 588  DGYPFKCLPTSFHPNDLIELILMNS--DIKQLWKNKKYLPNLRRLGLSYSRKLLKIVDF- 644

Query: 73   ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
                +L  L L+G  ++ E+  SI LL  L  L L  CKNLV +P++I  L SL+ LN+ 
Sbjct: 645  GEFPNLEWLNLEGCKNLVELDPSIGLLRKLVYLNLKNCKNLVSIPNNIFDLCSLEDLNMR 704

Query: 132  GCCKLENVPDTLGK--VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            GC K+ N P  L K  + S ++ +      R   S                + P  + + 
Sbjct: 705  GCSKVFNNPMHLKKSGLSSTKKKNKKQHDTRESESH--------------SSFPTPTTNT 750

Query: 190  HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            +L LPF+                    SL  +D+S C L +  +P  I+ LH L+ L L 
Sbjct: 751  YL-LPFS-------------------HSLRSIDISFCHLRQ--VPDAIECLHWLERLDLG 788

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP--PNLQFVRANGCSSLVTL--FGAL 305
             NNFVTLP S+  L  L  L LE CK L+SLP++P  P     +    ++ + L  FG +
Sbjct: 789  GNNFVTLP-SLRKLSKLVYLNLEHCKLLESLPRLPSPPTSGRDQQENNNTFIGLYDFGIV 847

Query: 306  KLCRSKYTIINC--IDSLKLLRKNGLAISMLREYLELQAVSDPG---HKLSIVFPGSQIP 360
            +   +   I NC  +   +  R + L  S + +++    +++P    ++  I+ PGS+IP
Sbjct: 848  RKI-TGLVIFNCPKLADCERERCSSLTFSWMIQFI----MANPQSYLNEFHIITPGSEIP 902

Query: 361  KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV-PKHSTGTYLFHSYPAHELECSM 419
             W   Q+ G SI +   S ++  +  +GF  C VF V P+ ST   ++      +L+   
Sbjct: 903  SWINNQSMGDSIPIEFSSAMH--DNTIGFVCCVVFSVAPQVST---VWFRIMCIDLDIP- 956

Query: 420  DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPT-WKVKRC 478
                    +  +G      S HLW++FLPR  ++ +FE+      +  + +    +VK C
Sbjct: 957  --------VTIKGSLITTKSSHLWMIFLPRGSYD-KFEN---ICCYDVLGEGLGMEVKSC 1004

Query: 479  GFHPIYMHEVEEFDET 494
            G+  I   +++EF+ T
Sbjct: 1005 GYRWICKQDLQEFNIT 1020



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 705 KYLSTLNLSGLSKFREFPEITSSRD--QLLEIHLEGTA-IRGLPASIELLSGNILSNLKD 761
           KYL  L   GLS  R+  +I    +   L  ++LEG   +  L  SI LL   +  NLK+
Sbjct: 622 KYLPNLRRLGLSYSRKLLKIVDFGEFPNLEWLNLEGCKNLVELDPSIGLLRKLVYLNLKN 681

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           CKNL S+P+ I  L SL  +   GCSK+ N
Sbjct: 682 CKNLVSIPNNIFDLCSLEDLNMRGCSKVFN 711


>gi|297742841|emb|CBI35599.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 150/328 (45%), Gaps = 47/328 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLEL 59
            + MK L +L    + I E+PSSI  LT LE L L  C      P     +++ LR L L
Sbjct: 25  FSEMKFLRELDFRESGIRELPSSIGSLTFLESLWLSKCSKFEKFPDNFFVNMRRLRILGL 84

Query: 60  S-----------------------GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
           S                        CS  +KFP+I  +ME+L +L LD + I E+   I 
Sbjct: 85  SDSGIKELPTSIECLEALEELLLDNCSNFEKFPEIQKNMENLVRLDLDDSGIKELSCLIG 144

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            LP L  L L++CKNL  +PS I  L+SL+   L  C  L      +  +E  + L +  
Sbjct: 145 HLPRLRSLELSKCKNLRSVPSGILQLESLRMCYLIDCSNL-----IMEDMEHSKGLSLRE 199

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGK---SSCPVALMLPSLT 213
           +AI    SSI        L  S C         +L    N +G+    +CP+   LP   
Sbjct: 200 SAITELPSSI-------RLVLSNCE--------NLETLPNSIGQLVVRNCPMLHKLPDSL 244

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
               L ++D+S C L   AIP D+  L SLK L ++ NN   +P  I  L  L  L +  
Sbjct: 245 RSMQLKEIDVSGCNLMAGAIPDDLWCLFSLKWLNVSGNNIDCIPGGIIRLSRLHTLIMRH 304

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           C  L+ +P++P +L+++ A GC  L TL
Sbjct: 305 CLMLKEIPELPSSLRWIDARGCPLLETL 332



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 26/165 (15%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA-LKYLSTLNLS------------- 713
           + IREL  +I  L  L  L L+ C   E+ P      ++ L  L LS             
Sbjct: 39  SGIRELPSSIGSLTFLESLWLSKCSKFEKFPDNFFVNMRRLRILGLSDSGIKELPTSIEC 98

Query: 714 ----------GLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
                       S F +FPEI  + + L+ + L+ + I+ L   I  L       L  CK
Sbjct: 99  LEALEELLLDNCSNFEKFPEIQKNMENLVRLDLDDSGIKELSCLIGHLPRLRSLELSKCK 158

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
           NL+S+PS I  L SLRM Y   CS L  + E +   + L +R S+
Sbjct: 159 NLRSVPSGILQLESLRMCYLIDCSNL--IMEDMEHSKGLSLRESA 201



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M+    L L  ++ITE+PSSI L+       L  C+NL +LP +I  L       + 
Sbjct: 186 MEDMEHSKGLSLRESAITELPSSIRLV-------LSNCENLETLPNSIGQLV------VR 232

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSI--AEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            C  L K P  + SM+ L ++ + G ++    +P  +  L  L+ L ++   N+  +P  
Sbjct: 233 NCPMLHKLPDSLRSMQ-LKEIDVSGCNLMAGAIPDDLWCLFSLKWLNVSG-NNIDCIPGG 290

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS 165
           I  L  L TL +  C  L+ +P+      SL  +D  G  +    SS
Sbjct: 291 IIRLSRLHTLIMRHCLMLKEIPEL---PSSLRWIDARGCPLLETLSS 334



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 9/186 (4%)

Query: 122 LKSLKTLNLSGCC---KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  L+ LNL GC    KL +   T  +++ L ELD   + IR   SSI  +  L SL+ S
Sbjct: 1   MPKLEKLNLEGCVSFSKLHSSIGTFSEMKFLRELDFRESGIRELPSSIGSLTFLESLWLS 60

Query: 179 GCNE-PPASASWHLHL-PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            C++      ++ +++    +LG S   +  +  S+  + +L +L L +C   E   P  
Sbjct: 61  KCSKFEKFPDNFFVNMRRLRILGLSDSGIKELPTSIECLEALEELLLDNCSNFE-KFPEI 119

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN--- 293
             N+ +L  L L+ +    L   I  L  L  LEL  CK L+S+P     L+ +R     
Sbjct: 120 QKNMENLVRLDLDDSGIKELSCLIGHLPRLRSLELSKCKNLRSVPSGILQLESLRMCYLI 179

Query: 294 GCSSLV 299
            CS+L+
Sbjct: 180 DCSNLI 185


>gi|357474811|ref|XP_003607691.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508746|gb|AES89888.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1050

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 184/455 (40%), Gaps = 96/455 (21%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           LRTL+LS  + L K       + +L +L L+G   + E+   I L   L  L L  C++L
Sbjct: 622 LRTLDLSYSTNLIKMLDF-GEVPNLERLNLEGCVKLVEMDLFICLPKKLVFLNLKNCRSL 680

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
           + +P+ I+GL SL+ LNL GC K  N                                NL
Sbjct: 681 ISIPNGISGLNSLEYLNLCGCSKALN--------------------------------NL 708

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           R L      E P+ AS                          +C L ++D+S C L  + 
Sbjct: 709 RHL------EWPSLAS--------------------------LCCLREVDISFCNL--SH 734

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +P DI++L  ++   L  N FVTLP   + L  LE L LE C  L SLP++P        
Sbjct: 735 LPGDIEDLSCVERFNLGGNKFVTLPG-FTLLSKLEYLNLEHCLMLTSLPELPSPAAIKHD 793

Query: 293 NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAIS-MLREYLELQAVSDPGHKLS 351
              S+ + +F   +L           D  +  R + L  S ML+  L  Q  S     + 
Sbjct: 794 EYWSAGMYIFNCSEL-----------DENETKRCSRLTFSWMLQFILANQESSASFRSIE 842

Query: 352 IVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYP 411
           IV PGS+IP WF  Q E  SI +  PS +   + V+G A C VF    H   +      P
Sbjct: 843 IVIPGSEIPSWFNNQREDGSICIN-PSLIMRDSNVIGIACCVVFSAAPHGLISTTNGQKP 901

Query: 412 AHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFE---------SNLIR 462
              L     G  E H+         ++S H+WL +  R      F+          + I 
Sbjct: 902 VLYLSFHR-GDFELHFSILVNA-NPIISSHMWLTYFTRESF---FDILKDIGNRADDCIS 956

Query: 463 LSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
           +    +     +VK CG+  ++  +++EF+  T Q
Sbjct: 957 MEAFIVDGEGLEVKSCGYRWVFKQDLQEFNLITMQ 991



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 8/147 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +L  L L+G   + E+   I L   L  L LK C++L S+P  IS L  L  L L
Sbjct: 639 FGEVPNLERLNLEGCVKLVEMDLFICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNL 698

Query: 60  SGCSK-LKKFPQI----VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
            GCSK L     +    +AS+  L ++ +   +++ +P  IE L  +E   L   K  V 
Sbjct: 699 CGCSKALNNLRHLEWPSLASLCCLREVDISFCNLSHLPGDIEDLSCVERFNLGGNK-FVT 757

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD 141
           LP     L  L+ LNL  C  L ++P+
Sbjct: 758 LP-GFTLLSKLEYLNLEHCLMLTSLPE 783


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 149/290 (51%), Gaps = 25/290 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L LD   +T VP+ I  LT L  L L G + L+S+P  +  L  L TL L 
Sbjct: 226 IGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQ-LTSVPAEVVQLTSLDTLRLG 284

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL-ELLYLNECKNLVRLPSSI 119
           G ++L   P  +  +  L +L+L G  +  VP+ I  L  L EL + N    L  +P+ I
Sbjct: 285 G-NQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYN--SQLTSVPAEI 341

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L SL+  +L G  +L +VP  +G++ +L EL + G  +    + I  + +L+ L   G
Sbjct: 342 GQLTSLEKWDL-GKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLL-G 399

Query: 180 CNEP---PA-----SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA 231
           CN+    PA     ++ W L L  N L  +S P       +  + SL KLDLSD  L   
Sbjct: 400 CNQLTSLPADIGQLTSLWELRLDGNRL--TSVPA-----EIGQLTSLEKLDLSDNQL--T 450

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           ++P++I  L SL ELYLN N   ++PA I+ L +L EL   + + L S+P
Sbjct: 451 SVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQ-LTSVP 499



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 154/345 (44%), Gaps = 41/345 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L LDG  +T +P+ I  L  L+ L L GC  L+SLP  I  L  L  L L 
Sbjct: 364 IGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLL-GCNQLTSLPADIGQLTSLWELRLD 422

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +  L KL L    +  VP+ I  L  L  LYLN    L  +P+ I 
Sbjct: 423 G-NRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLN-GNQLTSVPAEIA 480

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ L      +L +VP  +G++ SLE+ D+    +    + I  +  LR L   G 
Sbjct: 481 QLTSLRELGFYNS-QLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDG- 538

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                          N L          LP+  G + SL KL L    L   ++P+DI  
Sbjct: 539 ---------------NRLTS--------LPAEIGQLASLKKLLLGCNQL--TSLPADIGQ 573

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANG 294
           L SL EL L+ N   ++PA I  L +LE+L+L D  +L S+P     L      ++  N 
Sbjct: 574 LTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSD-NQLTSVPTEIGQLTSLTELYLNGNQ 632

Query: 295 CSSLVTLFGALKLCRSKYTIINCIDS----LKLLRKNGLAISMLR 335
            +S+ T    L L    +   N + S    ++ LR  G  + + R
Sbjct: 633 LTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIRELRAAGCTVDLGR 677



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           + KL+L D  L   A+P++I  L S+ +L L +N   +LPA I  L +L EL L D  RL
Sbjct: 185 VVKLELEDFDL-TGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELAL-DNNRL 242

Query: 278 QSLP 281
            S+P
Sbjct: 243 TSVP 246


>gi|356497765|ref|XP_003517729.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1135

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 214/507 (42%), Gaps = 137/507 (27%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++   +L DL L    S+ +V  SI  L  L+ L L+GC  + SL   +  L+ L+ L L
Sbjct: 656  LSKATNLEDLSLSQCKSLRQVHPSILSLPKLQSLDLEGCIEIQSLQSDVH-LESLQDLRL 714

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CS LK+F   V S+E L +L+LDGT I E                        LP+SI
Sbjct: 715  SNCSSLKEFS--VMSVE-LRRLWLDGTHIQE------------------------LPASI 747

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             G   LK +++ GC  L+   D L                  P ++ F      SL  SG
Sbjct: 748  WGCTKLKFIDVQGCDNLDGFGDKLS---------------YDPRTTCF-----NSLVLSG 787

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            C +  AS     +L F                L G+ SLT L+L +C      +P  I  
Sbjct: 788  CKQLNAS-----NLDF---------------ILVGMRSLTSLELENC-FNLRTLPDSIGL 826

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L SLK L L+R+N  +LPASI  L+ L  L L+ C +L SLP++P +L  + A  C+SLV
Sbjct: 827  LSSLKLLKLSRSNVESLPASIENLVKLRRLYLDHCMKLVSLPELPESLWLLSAVNCASLV 886

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
            T           +T +N    LK                  Q + D     S+  PG  +
Sbjct: 887  T----------NFTQLNIPFQLK------------------QGLEDLPQ--SVFLPGDHV 916

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF--QVPKHSTGTYLFHSYPAHELEC 417
            P+ F +  EG+S+T+        ++ ++   I CVF  Q P H  G Y++     ++   
Sbjct: 917  PERFSFHAEGASVTIPH----LPLSDLLCGLIFCVFLSQSPPH--GKYVYVDCFIYKNSQ 970

Query: 418  SMDGSGEGHYIYFRGKFGHVVSDH--LWLLFLPRHGHNWQFESNLIRLSFRSISDP---- 471
             +DG G       R    +++ DH  LW + + + G +    S L RL      DP    
Sbjct: 971  RIDGRGA------RLHDQNLILDHVFLWFVDIKQFGDD----SLLRRLQKGEACDPSNIS 1020

Query: 472  -------------TWKVKRCGFHPIYM 485
                         T  +K CG +PIY+
Sbjct: 1021 FEFLVEDEDGEWSTKNIKGCGIYPIYV 1047


>gi|223452607|gb|ACM89630.1| resistance protein [Glycine max]
          Length = 409

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 125/236 (52%), Gaps = 32/236 (13%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G TS+TEV  S+     L ++ L+ CK L +LP  +  +  L+ L LSGCS+
Sbjct: 195 NLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNME-MSSLKYLNLSGCSE 253

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            K  P+   SME LS L L  T I ++PSS+  L GL  L L  CKNLV LP + + LKS
Sbjct: 254 FKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKS 313

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           LK L++ GC KL ++PD L +++ LE++ +S        SS F ++NL+  +        
Sbjct: 314 LKFLDVRGCSKLCSLPDGLEEMKCLEQICLSADDSVELPSSAFNLENLQITF-------- 365

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                   LP         P  L LP      SL +++LS C L + +IP +  +L
Sbjct: 366 -------ELP---------PSKLNLP------SLKRINLSYCNLSKESIPDEFCHL 399



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 6/154 (3%)

Query: 653 EADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI--SALKYLST 709
           + D  P++  ++ +G T + E+  ++     L  + L  CK L+ LP  +  S+LKYL  
Sbjct: 189 DFDAAPNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKTLPSNMEMSSLKYL-- 246

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
            NLSG S+F+  PE   S +QL  + L+ T I  LP+S+  L G    NLK+CKNL  LP
Sbjct: 247 -NLSGCSEFKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLP 305

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            T + L+SL+ +   GCSKL ++ + L +++ LE
Sbjct: 306 DTFHKLKSLKFLDVRGCSKLCSLPDGLEEMKCLE 339



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 76/140 (54%), Gaps = 9/140 (6%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           SM+ LS L L  T IT++PSS+  L GL  L LK CKNL  LP T   LK L+ L++ GC
Sbjct: 263 SMEQLSLLILKETPITKLPSSLGCLVGLAHLNLKNCKNLVCLPDTFHKLKSLKFLDVRGC 322

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           SKL   P  +  M+ L ++ L      E+PSS   L  L++ +         LP S   L
Sbjct: 323 SKLCSLPDGLEEMKCLEQICLSADDSVELPSSAFNLENLQITF--------ELPPSKLNL 374

Query: 123 KSLKTLNLSGC-CKLENVPD 141
            SLK +NLS C    E++PD
Sbjct: 375 PSLKRINLSYCNLSKESIPD 394



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 28/219 (12%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L+ L+ ++LS    LK+ P   A+  +L  L L+G TS+ EV  S+     L ++ L +C
Sbjct: 170 LEKLKCIDLSFSKNLKQSPDFDAA-PNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDC 228

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           K L  LPS++  + SLK LNLSGC + + +P+    +E L  L +  T I +  SS+   
Sbjct: 229 KRLKTLPSNME-MSSLKYLNLSGCSEFKYLPEFGESMEQLSLLILKETPITKLPSSL--- 284

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGL 228
                    GC    A    HL+L        +C   + LP +   + SL  LD+  C  
Sbjct: 285 ---------GCLVGLA----HLNL-------KNCKNLVCLPDTFHKLKSLKFLDVRGCS- 323

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
              ++P  ++ +  L+++ L+ ++ V LP+S   L NL+
Sbjct: 324 KLCSLPDGLEEMKCLEQICLSADDSVELPSSAFNLENLQ 362


>gi|9759605|dbj|BAB11393.1| disease resistance protein RPS4 [Arabidopsis thaliana]
          Length = 1232

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 224/533 (42%), Gaps = 108/533 (20%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            K+L DL L  + I ++    +  + L+ L L     L SL   +S  + L+++ L GC+ 
Sbjct: 639  KNLIDLKLPYSQIEQIWEEEKDTSNLQWLDLNHSSKLHSLS-GLSRAQKLQSINLEGCTG 697

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            LK  PQ++ +ME L  L L G +      S+E LP + L+                    
Sbjct: 698  LKTLPQVLQNMESLMFLNLRGCT------SLESLPDITLV-------------------G 732

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L+TL LS C + +         ++LEEL + GTAI+   S+I  ++ L SL    C    
Sbjct: 733  LRTLILSNCSRFKEFKLI---AKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCK--- 786

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                       NLL   S P      S+  + ++ ++ LS C   E+  P    NL  LK
Sbjct: 787  -----------NLL---SLP-----DSIGNLKAIQEIILSGCSSLES-FPEVNQNLKHLK 826

Query: 245  ELYLN-------------------RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
             L L+                    N F  LP SI  L +L  L+L+ CK L S+P +PP
Sbjct: 827  TLLLDGTAIKKIPELSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVPMLPP 886

Query: 286  NLQFVRANGCSSLVT-------LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYL 338
            NLQ++ A+GC SL T       L    +   S +   NC    K + +N +  S  R+ +
Sbjct: 887  NLQWLDAHGCISLETISILSDPLLAETEHLHSTFIFTNCTKLYK-VEENSIE-SYPRKKI 944

Query: 339  ELQ----AVSDPGHKLSIV----FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
            +L     A  + G  L ++    FPG Q+P WF ++  G  +    P + +N   + G A
Sbjct: 945  QLMSNALARYEKGLALDVLIGICFPGWQVPGWFNHRTVGLELKQNLPRH-WNAGGLAGIA 1003

Query: 391  ICCVFQVPKH----------STGTYLFHSYPAHELECSMDGSGE-GHYIYFRGKFGHVVS 439
            +C V     +           +G +        +  C + G  E G Y     K  HV  
Sbjct: 1004 LCAVVSFKDYISKNNRLLVTCSGEFKKEDKTLFQFSCILGGWTEHGSYEAREIKSDHVFI 1063

Query: 440  DHL-WLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVK-----RCGFHPIYMH 486
             +  WL F+ +   +    +    L F+ ++D T +V      +CGF  IY H
Sbjct: 1064 GYTSWLNFM-KSDDSIGCVATEASLRFQ-VTDGTREVTNCTVVKCGFSLIYSH 1114



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 100/162 (61%), Gaps = 6/162 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  + L  + L+G T +  +P  ++ +  L  L L+GC +L SLP    +L  LRTL L
Sbjct: 681 LSRAQKLQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDI--TLVGLRTLIL 738

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S CS+ K+F  I  ++E+L   YLDGT+I E+PS+I  L  L  L L +CKNL+ LP SI
Sbjct: 739 SNCSRFKEFKLIAKNLEEL---YLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSI 795

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
             LK+++ + LSGC  LE+ P+    ++ L+ L + GTAI++
Sbjct: 796 GNLKAIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKK 837



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L   ++ +  L+ L L GC +LE LP     L  L TL LS  S+F+EF  I  +
Sbjct: 696 TGLKTLPQVLQNMESLMFLNLRGCTSLESLPDI--TLVGLRTLILSNCSRFKEFKLIAKN 753

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L E++L+GTAI+ LP++I  L   I   LKDCKNL SLP +I  L++++ +  SGCS
Sbjct: 754 ---LEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCS 810

Query: 788 KLKNVTETLGKVESLEVRL 806
            L++  E    ++ L+  L
Sbjct: 811 SLESFPEVNQNLKHLKTLL 829



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 76/167 (45%), Gaps = 22/167 (13%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           NCSR  E      ++ ++  DGT I+EL   I  L  L+ L L  CKNL  LP +I  LK
Sbjct: 740 NCSRFKEFKLIAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLK 799

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI-------------------RGLPA 746
            +  + LSG S    FPE+  +   L  + L+GTAI                   R LP 
Sbjct: 800 AIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIPELSSVRRLSLSSNEFRILPR 859

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           SI  L      +LK CKNL S+P     L+ L      GC  L+ ++
Sbjct: 860 SIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLD---AHGCISLETIS 903


>gi|82542033|gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 165/383 (43%), Gaps = 62/383 (16%)

Query: 40  NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELL 98
           NL  L      L  L+   LS    L K P + +S   L KL L G +S+ EV  SI   
Sbjct: 649 NLKELWKGKKILNRLKIFNLSHSRNLVKTPNLHSS--SLEKLILKGCSSLVEVHQSIGHS 706

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L  L L  C +L  LP SI  +KSL+T+ + GC +LE +P+ +G ++ L EL   G  
Sbjct: 707 TSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFLTELLADGIK 766

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
             +  SSI  +K ++ L   GC+  P S S        L+      +   LP+      L
Sbjct: 767 TEQFLSSIGQLKYVKRLSLRGCSPTPPSCS--------LISAGVSILKCWLPTSFTEWRL 818

Query: 219 TK-LDLSDCGLGEAAIPS-DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            K L LS+CGL + A    D   L SL++L L+ N F +LP  I  L  L  L ++ C+ 
Sbjct: 819 VKHLMLSNCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFLPKLSHLVVQTCEY 878

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE 336
           L S+P +P +L  + A+ C SL        +C                R +G  I+   E
Sbjct: 879 LVSIPDLPSSLCLLDASSCKSL-----ERAMCN---------------RGHGYRINFSLE 918

Query: 337 YLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQ 396
           + EL                 ++P W  Y+ EG S++   P   +      G  +C    
Sbjct: 919 HDELH----------------EMPDWMSYRGEGCSLSFHIPPVFH------GLVLCNQM- 955

Query: 397 VPKHSTGTYLFHSYPAHELECSM 419
              H+T   + HS P    EC +
Sbjct: 956 ---HAT---VIHSNPYSVKECGV 972



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 20/193 (10%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L G +S+ EV  SI   T L  L LKGC +L +LP +I ++K L T+++ GCS+L
Sbjct: 685 LEKLILKGCSSLVEVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQL 744

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK------NLVR----- 114
           +K P+ +  M+ L++L  DG    +  SSI  L  ++ L L  C       +L+      
Sbjct: 745 EKLPEGMGDMKFLTELLADGIKTEQFLSSIGQLKYVKRLSLRGCSPTPPSCSLISAGVSI 804

Query: 115 ----LPSSINGLKSLKTLNLSGCC---KLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
               LP+S    + +K L LS C    +  N  D  G + SLE+LD+S          I 
Sbjct: 805 LKCWLPTSFTEWRLVKHLMLSNCGLSDRATNCVDFSG-LFSLEKLDLSENKFSSLPYGIG 863

Query: 168 LMKNLRSLYFSGC 180
            +  L  L    C
Sbjct: 864 FLPKLSHLVVQTC 876



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 97/229 (42%), Gaps = 63/229 (27%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL-----------L 680
           GR+ VR  SP+EPG  +R+W + D +  + Q    GTD+ E  LA+++           L
Sbjct: 534 GREVVRETSPKEPGKRTRIWNQEDAWNVLEQ--QKGTDVVE-GLALDVRASKAKSLSAGL 590

Query: 681 FGLVQ----LTLNGCK------------------------------------------NL 694
           F  ++    L +NG                                            NL
Sbjct: 591 FAEMKCLNLLQINGVHLTGSFKLLSKELMWICWHRCPLKDFPSDFTADYLAVLDMQYSNL 650

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSG 753
           + L +    L  L   NLS      + P + SS   L ++ L+G +++  +  SI   + 
Sbjct: 651 KELWKGKKILNRLKIFNLSHSRNLVKTPNLHSS--SLEKLILKGCSSLVEVHQSIGHSTS 708

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +  NLK C +LK+LP +I  ++SL  M   GCS+L+ + E +G ++ L
Sbjct: 709 LVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFL 757



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 20/156 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK----NLSSLPVTISSLKC--- 53
           M  MK L++L  DG    +  SSI  L  ++ L+L+GC     + S +   +S LKC   
Sbjct: 751 MGDMKFLTELLADGIKTEQFLSSIGQLKYVKRLSLRGCSPTPPSCSLISAGVSILKCWLP 810

Query: 54  --------LRTLELSGCSKLKKFPQIV--ASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
                   ++ L LS C    +    V  + +  L KL L     + +P  I  LP L  
Sbjct: 811 TSFTEWRLVKHLMLSNCGLSDRATNCVDFSGLFSLEKLDLSENKFSSLPYGIGFLPKLSH 870

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           L +  C+ LV +P   +   SL  L+ S C  LE  
Sbjct: 871 LVVQTCEYLVSIPDLPS---SLCLLDASSCKSLERA 903


>gi|297789019|ref|XP_002862524.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297308097|gb|EFH38782.1| hypothetical protein ARALYDRAFT_333306 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1091

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 218/502 (43%), Gaps = 136/502 (27%)

Query: 10   LYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLP-VTISSLKCLRTLELSGCSKLKK 67
            L L+G TS+ E+P  ++ +  L  L L+GC +L SLP +T+ SLK   TL LS CSK + 
Sbjct: 656  LNLEGCTSLKELPEEMQKMKKLVSLNLRGCTSLLSLPKITMDSLK---TLILSCCSKFQT 712

Query: 68   FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            F  I   +E    LYL+ T+I E+P +I  L GL  L L +C             K+L T
Sbjct: 713  FEVISKHLE---TLYLNNTAIDELPPTIGNLHGLIFLDLKDC-------------KNLAT 756

Query: 128  LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLYFSGCNEPPAS 186
            L           PD L K++SL+EL +SG +  +   ++   M NLR L   G + P   
Sbjct: 757  L-----------PDCLWKMKSLQELKLSGCSKLKSFPNVKETMVNLRILLLDGTSIP--- 802

Query: 187  ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                                                          +PS I +   L+ L
Sbjct: 803  ---------------------------------------------LMPSKIFDSSFLRRL 817

Query: 247  YLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL 305
             L+RN  + +L   +S L +L+ LEL+ CK L SLP++PPNL  + A+GCSSL T+   L
Sbjct: 818  CLSRNEEICSLLFDMSQLFHLKWLELKYCKNLTSLPKLPPNLLCLNAHGCSSLRTVASPL 877

Query: 306  ------KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV------ 353
                  +   S + + +C   L+ + K+ + IS +++  + Q +S+  H    V      
Sbjct: 878  ASLMPTEQIHSTFILTDC-HKLEQVSKSAI-ISYIQK--KSQLMSNDRHSQDFVFKSLIG 933

Query: 354  --FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYP 411
              FPG  +P WF +Q  GS + +  P    N  ++ G  +C V            F  Y 
Sbjct: 934  TCFPGCDVPVWFNHQALGSVLKLELPRD-GNEGRLSGIFLCVVVS----------FKEYK 982

Query: 412  AHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF--LPRHGHNWQFESNL-IRLSF--- 465
            A       +   E H          VVSDH+++ +  L       QF S   + L F   
Sbjct: 983  AQN-----NSLQELHT---------VVSDHVFIGYSTLFNSKQRKQFSSATEVSLRFEVT 1028

Query: 466  ---RSISDPTWKVKRCGFHPIY 484
               R +++   KV  CGF  +Y
Sbjct: 1029 NGTREVAE--CKVMNCGFSLVY 1048



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 80/136 (58%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K L  LYL+ T+I E+P +I  L GL  L LK CKNL++LP  +  +K L+ L+LSGCSK
Sbjct: 718 KHLETLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLWKMKSLQELKLSGCSK 777

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LK FP +  +M +L  L LDGTSI  +PS I     L  L L+  + +  L   ++ L  
Sbjct: 778 LKSFPNVKETMVNLRILLLDGTSIPLMPSKIFDSSFLRRLCLSRNEEICSLLFDMSQLFH 837

Query: 125 LKTLNLSGCCKLENVP 140
           LK L L  C  L ++P
Sbjct: 838 LKWLELKYCKNLTSLP 853



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 9/145 (6%)

Query: 656 EFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           E P ++++  +G T ++EL   ++ +  LV L L GC +L  LP+    +  L TL LS 
Sbjct: 649 EAPKLLRLNLEGCTSLKELPEEMQKMKKLVSLNLRGCTSLLSLPKI--TMDSLKTLILSC 706

Query: 715 LSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING 774
            SKF+ F  I+     L  ++L  TAI  LP +I  L G I  +LKDCKNL +LP  +  
Sbjct: 707 CSKFQTFEVISK---HLETLYLNNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLWK 763

Query: 775 LRSLRMMYPSGCSKLK---NVTETL 796
           ++SL+ +  SGCSKLK   NV ET+
Sbjct: 764 MKSLQELKLSGCSKLKSFPNVKETM 788



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 66/156 (42%), Gaps = 27/156 (17%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           + T I EL   I  L GL+ L L  CKNL  LP  +  +K L  L LSG SK + FP + 
Sbjct: 726 NNTAIDELPPTIGNLHGLIFLDLKDCKNLATLPDCLWKMKSLQELKLSGCSKLKSFPNVK 785

Query: 726 SSRDQLLEIHLEGTAIRGLPASI---ELLSGNILS---------------------NLKD 761
            +   L  + L+GT+I  +P+ I     L    LS                      LK 
Sbjct: 786 ETMVNLRILLLDGTSIPLMPSKIFDSSFLRRLCLSRNEEICSLLFDMSQLFHLKWLELKY 845

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           CKNL SLP     L  L      GCS L+ V   L 
Sbjct: 846 CKNLTSLPKLPPNLLCLN---AHGCSSLRTVASPLA 878


>gi|357513917|ref|XP_003627247.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521269|gb|AET01723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1085

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 217/498 (43%), Gaps = 84/498 (16%)

Query: 36   KGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS--KLYLDGTSIA---E 90
            KG + + S+ + +S +K    LELS        PQ  A M  L    +Y  G+       
Sbjct: 578  KGSEAIRSMAIRLSEIK---ELELS--------PQAFAKMSKLKFLDIYTKGSQNEGSLS 626

Query: 91   VPSSIELLPGLELLYLN-------------ECKNLV-------RLPSSINGLKSLKTLN- 129
            +P  +E LP  EL YL                +NLV       RL    +G K +  LN 
Sbjct: 627  LPQGLESLPN-ELRYLRWEYYPLEFLPSKFSAENLVILNLPYSRLKKLWHGAKDIVNLNV 685

Query: 130  --LSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
              LS    L  +PD   K  +L  LD+ S   +     S+F +KNL  L  SGC+   + 
Sbjct: 686  LILSSSALLTELPD-FSKATNLAVLDLQSCVGLTSVHPSVFSLKNLEKLDLSGCSSLKSL 744

Query: 187  ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
             S + HL            AL   S+T   ++ +LDL    + E  +PS I     L++L
Sbjct: 745  QS-NTHLSSLSYLSLYNCTALKEFSVTSE-NINELDLELTSIKE--LPSSIGLQTKLEKL 800

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL------VT 300
            YL   +  +LP SI  L  L  L+L  C  LQ+LP++PP+L+ + A+GC SL       T
Sbjct: 801  YLGHTHIESLPKSIKNLTRLRHLDLHHCSELQTLPELPPSLETLDADGCVSLENVAFRST 860

Query: 301  LFGALKLCRSKYTIINCID----SLKLLRKNGLAISML---REYLELQAVSDPGHKLSI- 352
                LK  + K T  NC+     SLK +  N   I+M+    +++      D  H   + 
Sbjct: 861  ASEQLKEKKKKVTFWNCLKLNEPSLKAIELNA-QINMMNFSHKHITWDRDRDHDHNQGMY 919

Query: 353  VFPGSQIPKWFMY---QNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
            V+PGS+IP+W  Y   +++  +I +    Y   +  + GF I  +      S G+ L   
Sbjct: 920  VYPGSKIPEWLEYSTTRHDYITIDLFSAPYFSKLGFIFGFVIPTI-----SSEGSTL--- 971

Query: 410  YPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESN-------LIR 462
                + + S DG  EG  +Y       + SDH++L++ PR  H      N        +R
Sbjct: 972  ----KFKIS-DGEDEGIKMYLDRPRHGIESDHVYLVYDPRCSHYLASRVNDQSKIKIQVR 1026

Query: 463  LSFRSISDPTWKVKRCGF 480
            ++ R+ + P   V+  GF
Sbjct: 1027 VASRTPTSPYVPVQLRGF 1044



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 33/199 (16%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK---------- 66
           +TE+P      T L +L L+ C  L+S+  ++ SLK L  L+LSGCS LK          
Sbjct: 694 LTELPD-FSKATNLAVLDLQSCVGLTSVHPSVFSLKNLEKLDLSGCSSLKSLQSNTHLSS 752

Query: 67  ----------KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
                        +   + E++++L L+ TSI E+PSSI L   LE LYL    ++  LP
Sbjct: 753 LSYLSLYNCTALKEFSVTSENINELDLELTSIKELPSSIGLQTKLEKLYLGHT-HIESLP 811

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-----TAIRRPTSSIFLMKN 171
            SI  L  L+ L+L  C +L+ +P+      SLE LD  G         R T+S  L + 
Sbjct: 812 KSIKNLTRLRHLDLHHCSELQTLPEL---PPSLETLDADGCVSLENVAFRSTASEQLKEK 868

Query: 172 LRSLYFSGC---NEPPASA 187
            + + F  C   NEP   A
Sbjct: 869 KKKVTFWNCLKLNEPSLKA 887



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 1/74 (1%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +++++L L+ TSI E+PSSI L T LE L L G  ++ SLP +I +L  LR L+L  CS+
Sbjct: 772 ENINELDLELTSIKELPSSIGLQTKLEKLYL-GHTHIESLPKSIKNLTRLRHLDLHHCSE 830

Query: 65  LKKFPQIVASMEDL 78
           L+  P++  S+E L
Sbjct: 831 LQTLPELPPSLETL 844


>gi|451798984|gb|AGF69190.1| TMV resistance protein N-like protein 4 [Vitis labrusca]
          Length = 1049

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 167/413 (40%), Gaps = 90/413 (21%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL  LP  I  LK L+TL+ +GC KLE  P+ +  +  L  LD+SGT
Sbjct: 652 VPNLEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGT 711

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI  +  L++L    C++        LH                         
Sbjct: 712 AIMDLPSSITHLNGLQTLLLQECSK--------LH------------------------- 738

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
                          IPS I  L SLK+L L   +F ++P +I+ L  L+ L L  C  L
Sbjct: 739 --------------QIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNL 784

Query: 278 QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREY 337
           + +P++P  L  +  + C+SL  L     L  S  ++  C  S                 
Sbjct: 785 EQIPELPSGLINLDVHHCTSLENLSSPSNLLWS--SLFKCFKS----------------- 825

Query: 338 LELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV 397
            ++QA        + +   + IP+W  +Q  G  IT+  P   Y  +  +GF +C ++ V
Sbjct: 826 -KIQARDFRRPVRTFIAERNGIPEWICHQKSGFKITMKLPWSWYENDDFLGFVLCSLY-V 883

Query: 398 PKHSTGTYLFHSYPAHELECSMDGSGEGHYI------YFRGKFGHVVSDHLWLLFLPR-- 449
           P     T      P  +  C ++   +  Y       +    +    S    L++ P+  
Sbjct: 884 PLEIETT------PHRDFNCKLNFDDDSAYFSCHSHQFCEFCYDEDASSQGCLIYYPKSN 937

Query: 450 -----HGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQ 497
                H + W+  +    + F     P  KV RCGFH +Y H+ E+ + T  Q
Sbjct: 938 IPEGYHSNEWRTLNASFNVYFG--VKPV-KVARCGFHFLYAHDYEQNNLTIVQ 987



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/126 (48%), Positives = 84/126 (66%), Gaps = 1/126 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+LTL+GC NL  LP  I  LK L+TL  +GCSKL++FP+I+A+M  L  L L GT+I 
Sbjct: 655 LEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIM 714

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           ++PSSI  L GL+ L L EC  L ++PS I  L SLK LNL G     ++P T+ ++  L
Sbjct: 715 DLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEG-GHFSSIPPTINQLSRL 773

Query: 150 EELDVS 155
           + L++S
Sbjct: 774 KALNLS 779



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 60/100 (60%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLE LPR I  LK+L TL+ +G SK   FPEI ++  +L  + L GTAI  LP
Sbjct: 658 LTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLP 717

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           +SI  L+G     L++C  L  +PS I  L SL+ +   G
Sbjct: 718 SSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEG 757



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 23/101 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL------------------- 41
           MA+M+ L  L L GT+I ++PSSI  L GL+ L L+ C  L                   
Sbjct: 697 MANMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLE 756

Query: 42  ----SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
               SS+P TI+ L  L+ L LS C+ L++ P++ + + +L
Sbjct: 757 GGHFSSIPPTINQLSRLKALNLSHCNNLEQIPELPSGLINL 797


>gi|168053070|ref|XP_001778961.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669633|gb|EDQ56216.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 174/314 (55%), Gaps = 20/314 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++S+K LS   L G +S+T +P+ +  L+ L+ L L+ C +L SLP  +++L  L TL+L
Sbjct: 8   LSSLKRLS---LRGYSSLTSLPNELANLSSLKELYLRDCSSLRSLPNELANLSSLTTLDL 64

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           +GCS L   P  + ++  L +L+L G S +  + + +  L  LE L L  C +L  LP+ 
Sbjct: 65  NGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSNELANLSSLEELNLRNCLSLASLPNE 124

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  L SL TL+LSGC  L ++P+ L  + SL+ L + G +++   ++ +  + +L +L  
Sbjct: 125 LANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCSSLTSSSNKLANLSSLTTLDL 184

Query: 178 SGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAA 232
           SGC+     P   A+       NL   S+C     LP+ LT + SLT L LS C L   +
Sbjct: 185 SGCSSLTSLPNVLANLSSLEELNL---SNCSSLARLPNELTNLSSLTVLYLSGC-LSLTS 240

Query: 233 IPSDIDNLHSLKELYLNR-NNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
           +P+++ NL S+ ELY    ++ ++ LP  +  L +L  L+L    RL +LP    NL  +
Sbjct: 241 LPNELANLSSVNELYFRDCSSLISFLPNELVNLSSLTRLDLSGYLRLTNLPNELTNLSSL 300

Query: 291 RA---NGCSSLVTL 301
            A   +GCSSL +L
Sbjct: 301 TAPSLSGCSSLTSL 314



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 168/315 (53%), Gaps = 19/315 (6%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L+ L L+G +S+T +P+ +  L+ L+ L LKGC NL+SL   +++L  L  L L
Sbjct: 53  LANLSSLTTLDLNGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSNELANLSSLEELNL 112

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  L   P  +A++  L  L L G +S+  +P+ +  L  L+ L L  C +L    + 
Sbjct: 113 RNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCSSLTSSSNK 172

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  L SL TL+LSGC  L ++P+ L  + SLEEL++S  +++ R  + +  + +L  LY 
Sbjct: 173 LANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNLSNCSSLARLPNELTNLSSLTVLYL 232

Query: 178 SGC-------NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
           SGC       NE    +S +  L F      S  ++ +   L  + SLT+LDLS   L  
Sbjct: 233 SGCLSLTSLPNELANLSSVN-ELYFR---DCSSLISFLPNELVNLSSLTRLDLSG-YLRL 287

Query: 231 AAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPN 286
             +P+++ NL SL    L+  ++  +LP  ++ L  L  L+L  C RL SLP     P +
Sbjct: 288 TNLPNELTNLSSLTAPSLSGCSSLTSLPKEMANLAILSILDLSGCLRLTSLPNELGNPSS 347

Query: 287 LQFVRANGCSSLVTL 301
           L  +  N CSSL +L
Sbjct: 348 LIILNLNSCSSLTSL 362



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 641 PQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P E  N S L E           L D + +R L   +  L  L  L LNGC +L  LP  
Sbjct: 26  PNELANLSSLKE---------LYLRDCSSLRSLPNELANLSSLTTLDLNGCSSLTSLPND 76

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNL 759
           +  L  L  L L G S         ++   L E++L    ++  LP  +  LS  I  +L
Sbjct: 77  LVNLSSLKRLFLKGCSNLTSLSNELANLSSLEELNLRNCLSLASLPNELANLSSLITLDL 136

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             C +L SLP+ +  L SL+ +   GCS L + +  L  + SL
Sbjct: 137 SGCSSLVSLPNELANLSSLKRLSLRGCSSLTSSSNKLANLSSL 179



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 9/162 (5%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRE-LSLA-----IELLFGLVQLTLNGCKNLERLPRT 700
           CS L   ++E  ++  +  +  ++R  LSLA     +  L  L+ L L+GC +L  LP  
Sbjct: 91  CSNLTSLSNELANLSSL--EELNLRNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNE 148

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           ++ L  L  L+L G S         ++   L  + L G +++  LP  +  LS     NL
Sbjct: 149 LANLSSLKRLSLRGCSSLTSSSNKLANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNL 208

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            +C +L  LP+ +  L SL ++Y SGC  L ++   L  + S
Sbjct: 209 SNCSSLARLPNELTNLSSLTVLYLSGCLSLTSLPNELANLSS 250



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNI 755
           LP  +  L  L  L+L G S     P   ++   L E++L + +++R LP  +  LS   
Sbjct: 1   LPNELLNLSSLKRLSLRGYSSLTSLPNELANLSSLKELYLRDCSSLRSLPNELANLSSLT 60

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             +L  C +L SLP+ +  L SL+ ++  GCS L +++  L  + SLE
Sbjct: 61  TLDLNGCSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSNELANLSSLE 108



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 2/129 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L +L L  C +L  LP  ++ L  L+TL+L+G S     P    +   L  + L+G 
Sbjct: 32  LSSLKELYLRDCSSLRSLPNELANLSSLTTLDLNGCSSLTSLPNDLVNLSSLKRLFLKGC 91

Query: 740 A-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + +  L   +  LS     NL++C +L SLP+ +  L SL  +  SGCS L ++   L  
Sbjct: 92  SNLTSLSNELANLSSLEELNLRNCLSLASLPNELANLSSLITLDLSGCSSLVSLPNELAN 151

Query: 799 VESLEVRLS 807
           + SL+ RLS
Sbjct: 152 LSSLK-RLS 159



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 5/163 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    ++  ++  +    L   +++  LS  +  L  L +L L  C +L  LP  ++
Sbjct: 67  CSSLTSLPNDLVNLSSLKRLFLKGCSNLTSLSNELANLSSLEELNLRNCLSLASLPNELA 126

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L TL+LSG S     P   ++   L  + L G +++      +  LS     +L  
Sbjct: 127 NLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLRGCSSLTSSSNKLANLSSLTTLDLSG 186

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           C +L SLP+ +  L SL  +  S CS L  +   L  + SL V
Sbjct: 187 CSSLTSLPNVLANLSSLEELNLSNCSSLARLPNELTNLSSLTV 229



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 14/214 (6%)

Query: 602 VSQAKAISQQGQFVKMISVD-SGCMSCY----KKWGRQTVRRQSPQEPGNCSRLWEEADE 656
           +S A   ++      +I++D SGC S      +     +++R S +    CS L   +++
Sbjct: 116 LSLASLPNELANLSSLITLDLSGCSSLVSLPNELANLSSLKRLSLR---GCSSLTSSSNK 172

Query: 657 FPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL 712
             ++  +    LS  + +  L   +  L  L +L L+ C +L RLP  ++ L  L+ L L
Sbjct: 173 LANLSSLTTLDLSGCSSLTSLPNVLANLSSLEELNLSNCSSLARLPNELTNLSSLTVLYL 232

Query: 713 SGLSKFREFPEITSSRDQLLEIHLE--GTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
           SG       P   ++   + E++     + I  LP  +  LS     +L     L +LP+
Sbjct: 233 SGCLSLTSLPNELANLSSVNELYFRDCSSLISFLPNELVNLSSLTRLDLSGYLRLTNLPN 292

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            +  L SL     SGCS L ++ + +  +  L +
Sbjct: 293 ELTNLSSLTAPSLSGCSSLTSLPKEMANLAILSI 326


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 143/281 (50%), Gaps = 30/281 (10%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           A  + L  LYL G  +TEVP  +  L  LE+L L G   L+SLP +I  L  L +L L  
Sbjct: 23  AKYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDL-GSNELTSLPESIGKLSNLTSLYLVN 81

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            +KL   P+ +  + +L++LYLDG  +  +P SI  L  L  LYL+  K L  LP SI  
Sbjct: 82  -NKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNK-LTSLPESIGK 139

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L +L +L+L G  +L ++P+++ K+ +L EL +    +     SI  + NL  LY  G N
Sbjct: 140 LSNLTSLDLGG-NQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYL-GHN 197

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
           +                  +S P      S+T + +LT LDLS   L   ++P  I  L 
Sbjct: 198 Q-----------------LTSLP-----ESITKLSNLTSLDLSWNKL--TSLPESITKLS 233

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +L  LYL  N   +LP SI+ L NL  L+L    +L S+P+
Sbjct: 234 NLTSLYLGSNQLTSLPESITTLSNLTVLDL-GSNQLTSMPE 273



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 142/282 (50%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L+ LYL    +T +P SI  L+ L  L L G + L+SLP +I+ L  L  L LS
Sbjct: 68  IGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQ-LTSLPESITKLSNLTELYLS 126

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL   P+ +  + +L+ L L G  +  +P SI  L  L  LYL   + L  LP SI 
Sbjct: 127 -VNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQ-LTSLPESIT 184

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L L G  +L ++P+++ K+ +L  LD+S   +     SI  + NL SLY  G 
Sbjct: 185 KLSNLTELYL-GHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYL-GS 242

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           N+                  +S P      S+T + +LT LDL    L   ++P  I  L
Sbjct: 243 NQ-----------------LTSLP-----ESITTLSNLTVLDLGSNQL--TSMPESITKL 278

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L ELYL+ N    LP SI+ L NL +L+L +  +L  LP+
Sbjct: 279 SNLTELYLDGNQLTRLPESITKLSNLTKLDLRN-NQLTRLPE 319



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 150/291 (51%), Gaps = 25/291 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L++LYLDG  +T +P SI  L+ L  L L   K L+SLP +I  L  L +L+L 
Sbjct: 91  ITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNK-LTSLPESIGKLSNLTSLDLG 149

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ +  + +L++LYL    +  +P SI  L  L  LYL   + L  LP SI 
Sbjct: 150 G-NQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQ-LTSLPESIT 207

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L +L+LS   KL ++P+++ K+ +L  L +    +     SI  + NL  L   G 
Sbjct: 208 KLSNLTSLDLS-WNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDL-GS 265

Query: 181 NE---PPASAS-----WHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEA 231
           N+    P S +       L+L  N L +        LP S+T + +LTKLDL +  L   
Sbjct: 266 NQLTSMPESITKLSNLTELYLDGNQLTR--------LPESITKLSNLTKLDLRNNQL--T 315

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +P  I  L +L +L L+ N   +LP SI  L NL  L L D  +L  LP+
Sbjct: 316 RLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRD-NQLTILPE 365



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 29/261 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L++LYL    +T +P SI  L+ L  L L G   L+SLP +I+ L  L +L+LS
Sbjct: 160 ITKLSNLTELYLGHNQLTSLPESITKLSNLTELYL-GHNQLTSLPESITKLSNLTSLDLS 218

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL   P+ +  + +L+ LYL    +  +P SI  L  L +L L     L  +P SI 
Sbjct: 219 -WNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLG-SNQLTSMPESIT 276

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L L G  +L  +P+++ K+ +L +LD+    + R   SI  + NL  L     
Sbjct: 277 KLSNLTELYLDGN-QLTRLPESITKLSNLTKLDLRNNQLTRLPESITKLSNLTKL----- 330

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                      +L +N L  +S P      S+  + +LT L L D  L    +P  I  L
Sbjct: 331 -----------NLSWNKL--TSLP-----ESIGKLSNLTSLYLRDNQL--TILPESITTL 370

Query: 241 HSLKELYLNRNNFVTLPASIS 261
            +L  LYLN N     P  I+
Sbjct: 371 SNLGWLYLNNNPLENPPIEIA 391



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 3/113 (2%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G   L  LP +I+ L  L+ L+L G ++    PE  +    L E++L+G  +  LP SI 
Sbjct: 241 GSNQLTSLPESITTLSNLTVLDL-GSNQLTSMPESITKLSNLTELYLDGNQLTRLPESIT 299

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LS     +L++ + L  LP +I  L +L  +  S  +KL ++ E++GK+ +L
Sbjct: 300 KLSNLTKLDLRNNQ-LTRLPESITKLSNLTKLNLS-WNKLTSLPESIGKLSNL 350



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 11/114 (9%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G   L  LP +I  L  L++L L   +K    PE  +    L E++L+G  +  LP SI 
Sbjct: 57  GSNELTSLPESIGKLSNLTSLYLVN-NKLTSLPESITKLSNLTELYLDGNQLTSLPESIT 115

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMM---------YPSGCSKLKNVTE 794
            LS N+         L SLP +I  L +L  +          P   +KL N+TE
Sbjct: 116 KLS-NLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTE 168



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 14/169 (8%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLF----------GLVQLTLNGCKNLE 695
           N + L+ + ++   + + ++  +++ EL L++  L            L  L L G + L 
Sbjct: 96  NLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQ-LT 154

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
            LP +I+ L  L+ L L G ++    PE  +    L E++L    +  LP SI  LS N+
Sbjct: 155 SLPESITKLSNLTELYL-GHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLS-NL 212

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            S       L SLP +I  L +L  +Y  G ++L ++ E++  + +L V
Sbjct: 213 TSLDLSWNKLTSLPESITKLSNLTSLY-LGSNQLTSLPESITTLSNLTV 260


>gi|410684754|ref|YP_006060761.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CMR15]
 gi|299069243|emb|CBJ40503.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CMR15]
          Length = 754

 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 36/288 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L+ L L GT + E+P+S   L+ L+ L+L+  K LS LP ++S+L  L +L L+
Sbjct: 147 LGALRKLAHLSLSGTQLRELPASTGYLSALQTLSLRDNKKLSGLPPSLSNLSGLESLTLA 206

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL---LPGLELLYLNECKNLVRLPS 117
           G + +++ P + +    L +L +D  S+A++P        L  L  L L+  K L  LP+
Sbjct: 207 G-NHIRELPSM-SKAHALQELTVDEPSLAKLPPDFGAGGTLGKLAHLSLSNTK-LRELPA 263

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSL 175
           ++  L  LKTL L G  KLE +P + G++  LE L + G  I+   P S +  +K L+  
Sbjct: 264 NLGNLSGLKTLTLQGNQKLEALPPSFGQLTGLEMLSLVGNHIKSLPPMSGVSALKKLKID 323

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
             S  + P    + H                          +LT L LS+  L  + +PS
Sbjct: 324 DASLASLPRDFGAQH-------------------------KALTNLSLSNTQL--STLPS 356

Query: 236 DIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            I+ L  L+EL LN N    TLP S++ +  L++L+L  CKRL+SLPQ
Sbjct: 357 SIEKLSHLQELKLNDNTQLRTLPDSLTKMKRLQKLDLSGCKRLESLPQ 404



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 22/175 (12%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL-- 59
            ++  L+ L L  T + E+P+++  L+GL+ LTL+G + L +LP +   L  L  L L  
Sbjct: 243 GTLGKLAHLSLSNTKLRELPANLGNLSGLKTLTLQGNQKLEALPPSFGQLTGLEMLSLVG 302

Query: 60  ---------SGCSKLKKFPQIVASMEDLSK-----------LYLDGTSIAEVPSSIELLP 99
                    SG S LKK     AS+  L +           L L  T ++ +PSSIE L 
Sbjct: 303 NHIKSLPPMSGVSALKKLKIDDASLASLPRDFGAQHKALTNLSLSNTQLSTLPSSIEKLS 362

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
            L+ L LN+   L  LP S+  +K L+ L+LSGC +LE++P ++GK+ +L+ELD+
Sbjct: 363 HLQELKLNDNTQLRTLPDSLTKMKRLQKLDLSGCKRLESLPQSIGKISTLQELDL 417



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           A  K L++L L  T ++ +PSSIE L+ L+ L L     L +LP +++ +K L+ L+LSG
Sbjct: 336 AQHKALTNLSLSNTQLSTLPSSIEKLSHLQELKLNDNTQLRTLPDSLTKMKRLQKLDLSG 395

Query: 62  CSKLKKFPQIVASMEDLSKLYL---DGTSIAEVPSSI 95
           C +L+  PQ +  +  L +L L      +IA +P S+
Sbjct: 396 CKRLESLPQSIGKISTLQELDLLNCTRLTIAALPYSV 432



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 50/202 (24%)

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           +L L    IA +P ++  +  L+ +  + C +L  L  ++  L+ L+TL+LSG  KL  +
Sbjct: 40  ELVLTSLPIARLPDAVFNMTQLKAIRTDHC-DLRELSPALQNLRQLETLSLSGAGKLNAL 98

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
           P  +G++  L+EL +  T I+                                       
Sbjct: 99  PHAVGQLPRLQELRLVDTGIQ--------------------------------------- 119

Query: 200 KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                    LP + G  +L ++ +S+  L  AA+P D+  L  L  L L+      LPAS
Sbjct: 120 --------ALPPMGGASALKEITVSNAPL--AALPDDLGALRKLAHLSLSGTQLRELPAS 169

Query: 260 ISGLLNLEELELEDCKRLQSLP 281
              L  L+ L L D K+L  LP
Sbjct: 170 TGYLSALQTLSLRDNKKLSGLP 191



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 22/158 (13%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL-----------SGLS 716
           T +REL   +  L GL  LTL G + LE LP +   L  L  L+L           SG+S
Sbjct: 256 TKLRELPANLGNLSGLKTLTLQGNQKLEALPPSFGQLTGLEMLSLVGNHIKSLPPMSGVS 315

Query: 717 KFREFP-----------EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
             ++             +  +    L  + L  T +  LP+SIE LS      L D   L
Sbjct: 316 ALKKLKIDDASLASLPRDFGAQHKALTNLSLSNTQLSTLPSSIEKLSHLQELKLNDNTQL 375

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           ++LP ++  ++ L+ +  SGC +L+++ +++GK+ +L+
Sbjct: 376 RTLPDSLTKMKRLQKLDLSGCKRLESLPQSIGKISTLQ 413



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 24/156 (15%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            +RL +       +  + +D  D+RELS A++ L  L  L+L+G   L  LP  +  L  
Sbjct: 48  IARLPDAVFNMTQLKAIRTDHCDLRELSPALQNLRQLETLSLSGAGKLNALPHAVGQLPR 107

Query: 707 LSTLNL-----------SGLSKFRE----------FPEITSSRDQLLEIHLEGTAIRGLP 745
           L  L L            G S  +E           P+   +  +L  + L GT +R LP
Sbjct: 108 LQELRLVDTGIQALPPMGGASALKEITVSNAPLAALPDDLGALRKLAHLSLSGTQLRELP 167

Query: 746 ASIELLSGNILSNLKDCKNLKSLP---STINGLRSL 778
           AS   LS     +L+D K L  LP   S ++GL SL
Sbjct: 168 ASTGYLSALQTLSLRDNKKLSGLPPSLSNLSGLESL 203



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 26/140 (18%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT +REL  +   L  L  L+L   K L  LP ++S L  L +L L+G +  RE P ++ 
Sbjct: 160 GTQLRELPASTGYLSALQTLSLRDNKKLSGLPPSLSNLSGLESLTLAG-NHIRELPSMSK 218

Query: 727 SR-------------------------DQLLEIHLEGTAIRGLPASIELLSGNILSNLKD 761
           +                           +L  + L  T +R LPA++  LSG     L+ 
Sbjct: 219 AHALQELTVDEPSLAKLPPDFGAGGTLGKLAHLSLSNTKLRELPANLGNLSGLKTLTLQG 278

Query: 762 CKNLKSLPSTINGLRSLRMM 781
            + L++LP +   L  L M+
Sbjct: 279 NQKLEALPPSFGQLTGLEML 298


>gi|82542043|gb|ABB82029.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1147

 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 159/340 (46%), Gaps = 28/340 (8%)

Query: 86  TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
           +S+ EV  SI  L  L  L L  C  L  LP SI  +KSLK LN+SGC +LE +P+ +G 
Sbjct: 658 SSLVEVHQSIGNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGD 717

Query: 146 VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW-------HLHLPFNLL 198
           +ESL EL   G   ++  SSI  +K +R L   G N    S SW             + +
Sbjct: 718 MESLIELLADGIENKQFLSSIGQLKYVRRLSLRGYNFSQDSPSWLSPSSTSWPPSISSFI 777

Query: 199 GKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP-SDIDNLHSLKELYLNRNNFVTL 256
             S   +  +LP +     S+  L+LS  GL +      D     SL+EL L+ N F +L
Sbjct: 778 SASVLCLKRLLPTTFIDWRSVKSLELSYVGLSDRVTNCVDFRGFSSLEELDLSGNKFSSL 837

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIIN 316
           P+ I  L  LE +++++CK L S+  +P NL ++ A GC SL  +   ++  +  Y  ++
Sbjct: 838 PSGIGFLAKLEMMDVQECKYLVSIRDLPSNLVYLFAGGCKSLERVRIPIESKKELYINLH 897

Query: 317 CIDSLKLLRKNGLAISMLREYLELQAVSDPGH-KLSIV--------------FPGSQIPK 361
              SL+ ++      ++    L    +  P   + S+V               PG ++P 
Sbjct: 898 ESHSLEEIQGIEGQSNIFWNILVDDCIPSPNKLQKSVVEAFCNGCYRYFIYCLPG-KMPN 956

Query: 362 WFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS 401
           W  Y  EG  ++   P     +  VV F +C + +V +HS
Sbjct: 957 WMSYSGEGCPLSFHIPPVFQGL--VVWF-VCSLEKVHRHS 993



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 94/234 (40%), Gaps = 73/234 (31%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEF--------PDIVQVLS---DGTDIRELSL-AIEL 679
           GR+ VR  SP+EPG  +R+W + D +         D+V+ L+     ++ + LS  +   
Sbjct: 498 GREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVKASEAKSLSTGSFAK 557

Query: 680 LFGLVQLTLNGCK------------------------------------------NLERL 697
           +  L  L +NG                                            NL++L
Sbjct: 558 MKRLNLLQINGVHLTGSFKLLSRELMLICWLQCPLKYFPSDFTFDNLDVLDMQYSNLKKL 617

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSR---------DQLLEIHLEGTAIRGLPASI 748
            +    L  L  +NLS      + P + SS            L+E+H           SI
Sbjct: 618 WKGKKILNRLKIINLSHSQNLIKTPNLHSSSLKKLKLKGCSSLVEVH----------QSI 667

Query: 749 ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             L+  I  NL+ C  LK LP +I  ++SL+ +  SGCS+L+ + E +G +ESL
Sbjct: 668 GNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGDMESL 721



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +I  L  L+ L L GC  L+ LP +I  +K L  LN+SG S+  + PE     + L
Sbjct: 662 EVHQSIGNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGDMESL 721

Query: 732 LEIHLEGTAIRGLPASI 748
           +E+  +G   +   +SI
Sbjct: 722 IELLADGIENKQFLSSI 738



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 66/173 (38%), Gaps = 39/173 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS----------------- 43
           M  M+ L +L  DG    +  SSI  L  +  L+L+G  N S                  
Sbjct: 715 MGDMESLIELLADGIENKQFLSSIGQLKYVRRLSLRG-YNFSQDSPSWLSPSSTSWPPSI 773

Query: 44  --------------LPVTISSLKCLRTLELSGCSKLKKFPQIV--ASMEDLSKLYLDGTS 87
                         LP T    + +++LELS      +    V       L +L L G  
Sbjct: 774 SSFISASVLCLKRLLPTTFIDWRSVKSLELSYVGLSDRVTNCVDFRGFSSLEELDLSGNK 833

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS-LKTLNLSGCCKLENV 139
            + +PS I  L  LE++ + ECK LV    SI  L S L  L   GC  LE V
Sbjct: 834 FSSLPSGIGFLAKLEMMDVQECKYLV----SIRDLPSNLVYLFAGGCKSLERV 882


>gi|297791295|ref|XP_002863532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309367|gb|EFH39791.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 167/385 (43%), Gaps = 102/385 (26%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           L+ L L+GC  L SL    S  K L++L LSGC+  KKFP I    E+L  L+LD T+I+
Sbjct: 678 LQGLNLEGCTRLESLADVDS--KSLKSLTLSGCTSFKKFPLIP---ENLEALHLDRTAIS 732

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           ++P ++  L  L LL + +C+ L  +P+ ++ LK+L+ L LSGC KL+N P+        
Sbjct: 733 QLPDNVVNLKKLVLLNMKDCELLENIPTCVDKLKALQKLVLSGCKKLQNFPEV------- 785

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
                         SS+ ++                           LL +++      L
Sbjct: 786 ------------NKSSLKIL---------------------------LLDRTAIKTMPQL 806

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
           PS+  +C L+  D   C      IP+DI+ L  L                         L
Sbjct: 807 PSVQYLC-LSFNDHLSC------IPADINQLSQLT-----------------------RL 836

Query: 270 ELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINCIDSLKL 323
           +L+ CK L S+P++PPNLQ+  A+GCS+L T+   L            +   NC  +L+ 
Sbjct: 837 DLKYCKSLTSVPELPPNLQYFDADGCSALKTVAKPLARIMPTVQNHCTFNFTNC-GNLEQ 895

Query: 324 LRKNGLAISMLREYLELQAVSDPGHK----------LSIVFPGSQIPKWFMYQNEGSSIT 373
             K  +A    R   + Q +SD               +  FPG ++P WF +   GS + 
Sbjct: 896 AAKEEIASYAQR---KCQLLSDARKHYDEGLSSEALFTTCFPGCEVPSWFCHDGVGSRLE 952

Query: 374 VTRPSYLYNVNKVVGFAICCVFQVP 398
           +    + ++   + G A+C V   P
Sbjct: 953 LKLLPHWHD-KSLSGIALCAVISFP 976



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 14/181 (7%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  L+LD T+I+++P ++  L  L LL +K C+ L ++P  +  LK L+ L LSGC K
Sbjct: 719 ENLEALHLDRTAISQLPDNVVNLKKLVLLNMKDCELLENIPTCVDKLKALQKLVLSGCKK 778

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+ FP++  S   L  L LD T+I  +P     LP ++ L L+   +L  +P+ IN L  
Sbjct: 779 LQNFPEVNKS--SLKILLLDRTAIKTMPQ----LPSVQYLCLSFNDHLSCIPADINQLSQ 832

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA----IRRPTSSIF-LMKNLRSLYFSG 179
           L  L+L  C  L +VP+      +L+  D  G +    + +P + I   ++N  +  F+ 
Sbjct: 833 LTRLDLKYCKSLTSVPEL---PPNLQYFDADGCSALKTVAKPLARIMPTVQNHCTFNFTN 889

Query: 180 C 180
           C
Sbjct: 890 C 890



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 649 RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           RLWE   + P +  V  + + +      +     L  L L GC  LE L    S  K L 
Sbjct: 644 RLWEGDKDTPVLKWVDLNHSSMLSSLSGLSKAPNLQGLNLEGCTRLESLADVDS--KSLK 701

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
           +L LSG + F++FP I    + L  +HL+ TAI  LP ++  L   +L N+KDC+ L+++
Sbjct: 702 SLTLSGCTSFKKFPLIP---ENLEALHLDRTAISQLPDNVVNLKKLVLLNMKDCELLENI 758

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTET 795
           P+ ++ L++L+ +  SGC KL+N  E 
Sbjct: 759 PTCVDKLKALQKLVLSGCKKLQNFPEV 785



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 41/236 (17%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           +FP I + L     D T I +L   +  L  LV L +  C+ LE +P  +  LK L  L 
Sbjct: 713 KFPLIPENLEALHLDRTAISQLPDNVVNLKKLVLLNMKDCELLENIPTCVDKLKALQKLV 772

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP--------------------ASIELL 751
           LSG  K + FPE+  S  ++L   L+ TAI+ +P                    A I  L
Sbjct: 773 LSGCKKLQNFPEVNKSSLKIL--LLDRTAIKTMPQLPSVQYLCLSFNDHLSCIPADINQL 830

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
           S     +LK CK+L S+P     L+        GCS LK V + L ++        ++N 
Sbjct: 831 SQLTRLDLKYCKSLTSVPELPPNLQYFDA---DGCSALKTVAKPLARIMPTVQNHCTFNF 887

Query: 812 PKMQNDFDCVEQSAVETVTKLA--KAELLRDSDSWKKNVDKCM---KLSTTATSAC 862
               N    +EQ+A E +   A  K +LL D+   +K+ D+ +    L TT    C
Sbjct: 888 TNCGN----LEQAAKEEIASYAQRKCQLLSDA---RKHYDEGLSSEALFTTCFPGC 936


>gi|356561376|ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1049

 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 159/379 (41%), Gaps = 83/379 (21%)

Query: 54  LRTLELSGCSKLKKFPQIVAS--MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN 111
           +R L  + C  + + P +  +  +++LS  Y +  ++ ++  S+  L  L++L  + C  
Sbjct: 628 MRVLNFNQCHYITEIPDVCGAPNLQELSFEYCE--NLIKIHVSVGFLDKLKILDADGCSK 685

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI----- 166
           L   P     L SL+ L LS C  LE  P+ LGK+E++  LD+  T I+   SSI     
Sbjct: 686 LTSFPPM--KLTSLEELKLSFCANLECFPEILGKMENVTSLDIKDTPIKELPSSIQHLSR 743

Query: 167 ------------------FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
                             F MK LR L  + C          L LP    GK        
Sbjct: 744 LQRIKLKNGGVIQLPSTFFAMKELRYLLVNQCE--------GLLLPVENEGKEQ------ 789

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           + S+    ++  LDLS C + +  + S +    ++KELYLN N+F  LPA I     L E
Sbjct: 790 MSSMVVENTIGYLDLSHCHISDKFLQSGLPLFSNVKELYLNGNDFTILPACIQEFQFLTE 849

Query: 269 LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG 328
           L LE C+ L  +  IPPNL+   A  CSSL +       CRS            LL +  
Sbjct: 850 LYLEACENLHEIGWIPPNLEVFSARECSSLTS------ECRS-----------MLLNEEL 892

Query: 329 LAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVG 388
                 +E+               + PG++IP+WF   NE S     R       +K   
Sbjct: 893 HEADGFKEF---------------ILPGTRIPEWFECTNESSICFWFR-------DKFPA 930

Query: 389 FAICCVFQVPKHSTGTYLF 407
            ++C V + P  S  T+ F
Sbjct: 931 ISVCVVSE-PMDSDVTFSF 948



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 37/195 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR----- 55
           +  M++++ L +  T I E+PSSI+ L+ L+ + LK    +  LP T  ++K LR     
Sbjct: 715 LGKMENVTSLDIKDTPIKELPSSIQHLSRLQRIKLKN-GGVIQLPSTFFAMKELRYLLVN 773

Query: 56  ---------------------------TLELSGCSKLKKFPQI-VASMEDLSKLYLDGTS 87
                                       L+LS C    KF Q  +    ++ +LYL+G  
Sbjct: 774 QCEGLLLPVENEGKEQMSSMVVENTIGYLDLSHCHISDKFLQSGLPLFSNVKELYLNGND 833

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVR---LPSSINGLKSLKTLNLSGCCKLENVPDTLG 144
              +P+ I+    L  LYL  C+NL     +P ++    + +  +L+  C+   + + L 
Sbjct: 834 FTILPACIQEFQFLTELYLEACENLHEIGWIPPNLEVFSARECSSLTSECRSMLLNEELH 893

Query: 145 KVESLEELDVSGTAI 159
           + +  +E  + GT I
Sbjct: 894 EADGFKEFILPGTRI 908



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           ++ +++  L  L  L  +GC  L   P     L  L  L LS  +    FPEI    + +
Sbjct: 664 KIHVSVGFLDKLKILDADGCSKLTSFPPM--KLTSLEELKLSFCANLECFPEILGKMENV 721

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
             + ++ T I+ LP+SI+ LS      LK+   +  LPST   ++ LR +  + C  L  
Sbjct: 722 TSLDIKDTPIKELPSSIQHLSRLQRIKLKN-GGVIQLPSTFFAMKELRYLLVNQCEGLLL 780

Query: 792 VTETLGK 798
             E  GK
Sbjct: 781 PVENEGK 787


>gi|147833945|emb|CAN61773.1| hypothetical protein VITISV_043565 [Vitis vinifera]
          Length = 695

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 116/246 (47%), Gaps = 46/246 (18%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L  L+LS    L K     ++M  L KL L+G TS+ E+ SSI  L  L  L LN CKNL
Sbjct: 365 LTVLDLSHSRNLVKISNF-STMPKLEKLILEGCTSLLEIDSSIGDLNKLIFLNLNGCKNL 423

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LPSS   LK L+TL +SGC + E  P  L  ++    L  + TA    TS +      
Sbjct: 424 DSLPSSFCKLKFLETLIVSGCFRPEEXPVDLAGLQISGNLPENXTATGGSTSQV------ 477

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
                                                 SL G+CSL +LDLSDC L +  
Sbjct: 478 --------------------------------------SLFGLCSLRELDLSDCHLSDGV 499

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           IPSD   L SL+ L L+ N+F  +P  I+ L  L  L+L  C+RL  +P +P  +Q V A
Sbjct: 500 IPSDFWRLSSLERLNLSGNDFTVIPEGIAQLSKLSVLQLGYCQRLLGIPNLPSTVQEVDA 559

Query: 293 NGCSSL 298
           + CSSL
Sbjct: 560 HVCSSL 565



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 36/185 (19%)

Query: 658 PDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + +++ +G T + E+  +I  L  L+ L LNGCKNL+ LP +   LK+L TL +SG  
Sbjct: 386 PKLEKLILEGCTSLLEIDSSIGDLNKLIFLNLNGCKNLDSLPSSFCKLKFLETLIVSGCF 445

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRG-LPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
           +  E P           + L G  I G LP +     G+            +   ++ GL
Sbjct: 446 RPEEXP-----------VDLAGLQISGNLPENXTATGGS------------TSQVSLFGL 482

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQ-NDFDCVEQSAVETVTKLAK 834
            SLR +  S C        + G + S   RLSS  R  +  NDF  +     E + +L+K
Sbjct: 483 CSLRELDLSDCHL------SDGVIPSDFWRLSSLERLNLSGNDFTVIP----EGIAQLSK 532

Query: 835 AELLR 839
             +L+
Sbjct: 533 LSVLQ 537


>gi|297815270|ref|XP_002875518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321356|gb|EFH51777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1080

 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 169/380 (44%), Gaps = 79/380 (20%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++   L +L+L D TS+ E+PSSI     L+ L L  CK++  LP    +   L  L L
Sbjct: 672 LSTATKLQELFLIDCTSLVELPSSIGNAISLQTLHLGECKSIVELPSCFGNAINLSWLNL 731

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS L                        E+PSSI     LE+L+++ C ++V+LPSSI
Sbjct: 732 SGCSSL-----------------------VELPSSIGNATNLEILHMDMCTDVVKLPSSI 768

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L  L+   L GC KLE +P  +  +ESL+EL+++   + +    I    N++ LY +G
Sbjct: 769 GNLYKLREFTLKGCLKLEILPTNIN-LESLDELNLTDCLLLKRFPEI--STNIKHLYLNG 825

Query: 180 --CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA--AIPS 235
               E P+S                            + S ++LD       E+    P 
Sbjct: 826 TAVEEVPSS----------------------------IKSWSRLDDLHMSYSESLKKFPH 857

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
            +D + +   LY+N      +P  ++ +  L  L+L  CK+L SLPQ+P +L ++ A  C
Sbjct: 858 ALDIITT---LYVNDLEMHEIPLWVTKISCLRGLKLNGCKKLVSLPQLPDSLSYLEAVNC 914

Query: 296 SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP 355
            SL  L  +    +     +NC    K  R+           L +Q  +D       V P
Sbjct: 915 ESLERLDFSFYNPKIYLNFVNCFKLNKEARE-----------LIIQTSTDYA-----VLP 958

Query: 356 GSQIPKWFMYQ-NEGSSITV 374
           G ++P  F Y+ N G+S+ V
Sbjct: 959 GGEVPAKFTYRANRGNSMIV 978



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 4/111 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           TD+ +L  +I  L+ L + TL GC  LE LP  I+ L+ L  LNL+     + FPEI+++
Sbjct: 759 TDVVKLPSSIGNLYKLREFTLKGCLKLEILPTNIN-LESLDELNLTDCLLLKRFPEISTN 817

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
              L   +L GTA+  +P+SI+  S     ++   ++LK  P  ++ + +L
Sbjct: 818 IKHL---YLNGTAVEEVPSSIKSWSRLDDLHMSYSESLKKFPHALDIITTL 865



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 18/183 (9%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T + EL  +I     L  L L  CK++  LP        LS LNLSG S   E P 
Sbjct: 683 LIDCTSLVELPSSIGNAISLQTLHLGECKSIVELPSCFGNAINLSWLNLSGCSSLVELPS 742

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM- 781
              +   L  +H++  T +  LP+SI  L       LK C  L+ LP+ IN L SL  + 
Sbjct: 743 SIGNATNLEILHMDMCTDVVKLPSSIGNLYKLREFTLKGCLKLEILPTNIN-LESLDELN 801

Query: 782 ---------YPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKL 832
                    +P   + +K++      VE +   + SW+R       D +  S  E++ K 
Sbjct: 802 LTDCLLLKRFPEISTNIKHLYLNGTAVEEVPSSIKSWSR------LDDLHMSYSESLKKF 855

Query: 833 AKA 835
             A
Sbjct: 856 PHA 858



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 3/142 (2%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VLS   +++EL   +     L +L L  C +L  LP +I     L TL+L       E P
Sbjct: 659 VLSYSKNLKELP-NLSTATKLQELFLIDCTSLVELPSSIGNAISLQTLHLGECKSIVELP 717

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
               +   L  ++L G +++  LP+SI   +   + ++  C ++  LPS+I  L  LR  
Sbjct: 718 SCFGNAINLSWLNLSGCSSLVELPSSIGNATNLEILHMDMCTDVVKLPSSIGNLYKLREF 777

Query: 782 YPSGCSKLKNVTETLGKVESLE 803
              GC KL+ +  T   +ESL+
Sbjct: 778 TLKGCLKLE-ILPTNINLESLD 798


>gi|357474815|ref|XP_003607693.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508748|gb|AES89890.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 982

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 186/443 (41%), Gaps = 93/443 (20%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L TL+LS  S L K P       +L  L L+G  ++  +  SI LL  +  L L +CKNL
Sbjct: 596 LITLDLSYSSHLIKVPNF-GEFPNLEHLNLEGCKNLLRLDPSIGLLRKIVSLNLKDCKNL 654

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
           V +P++I GL  LK LN+ GC ++ N+P  L  +ES+                +  + N 
Sbjct: 655 VSIPNNIFGLSFLKDLNMCGCSEVFNIPWDLNIIESV----------------LLFLPN- 697

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
                S    P A  +W                      LT + SL+      CGL +  
Sbjct: 698 -----SPFPTPTAQTNW----------------------LTSIISLSCF----CGLNQ-- 724

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +P  I  LH L+EL L  N FVTLP S+  L  L  L LE CK L+SLPQ+P        
Sbjct: 725 LPDAIGCLHWLEELNLGGNKFVTLP-SLRDLSKLVCLNLEHCKLLESLPQLP-------- 775

Query: 293 NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
                      A+K    K T +         +K GL I           + +  H  S 
Sbjct: 776 --------FPTAIKHNLRKKTTV---------KKRGLYI------FNCPKLCESEHYCS- 811

Query: 353 VFPGSQIPKWFMYQNEGSSITV-TRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYP 411
               S+I  WF  Q++G SI + + P    N N ++GF  C VF +  H    YL   + 
Sbjct: 812 ---RSEISSWFKNQSKGDSIRIDSSPIIHDNNNNIIGFVCCAVFSMAPHHPSRYLPLEFV 868

Query: 412 AHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDP 471
             E+    + +     I     F  V S+H+WL + P     W   +  + ++  +    
Sbjct: 869 --EIHGKRNCTTSIPVILIESLFT-VKSNHIWLAYFPLESF-WNVRNETMHVAASTGEGL 924

Query: 472 TWKVKRCGFHPIYMHEVEEFDET 494
             KVK  G+H +Y H+++E + T
Sbjct: 925 VIKVKIFGYHWVYKHDLQELNLT 947



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 11/113 (9%)

Query: 692 KNLERLPRTISA-LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIE 749
           K  + LP  I+  L Y S  +L  +  F EFP        L  ++LEG   +  L  SI 
Sbjct: 588 KGRKYLPNLITLDLSYSS--HLIKVPNFGEFP-------NLEHLNLEGCKNLLRLDPSIG 638

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           LL   +  NLKDCKNL S+P+ I GL  L+ +   GCS++ N+   L  +ES+
Sbjct: 639 LLRKIVSLNLKDCKNLVSIPNNIFGLSFLKDLNMCGCSEVFNIPWDLNIIESV 691



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 28/158 (17%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
                +L  L L+G  ++  +  SI LL  +  L LK CKNL S+P  I  L  L+ L +
Sbjct: 613 FGEFPNLEHLNLEGCKNLLRLDPSIGLLRKIVSLNLKDCKNLVSIPNNIFGLSFLKDLNM 672

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCS++   P  +  +E  S L     S    P+                       +  
Sbjct: 673 CGCSEVFNIPWDLNIIE--SVLLFLPNSPFPTPT-----------------------AQT 707

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           N L S+  ++LS  C L  +PD +G +  LEEL++ G 
Sbjct: 708 NWLTSI--ISLSCFCGLNQLPDAIGCLHWLEELNLGGN 743



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 656 EFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           EFP++  +  +G  ++  L  +I LL  +V L L  CKNL  +P  I  L +L  LN+ G
Sbjct: 615 EFPNLEHLNLEGCKNLLRLDPSIGLLRKIVSLNLKDCKNLVSIPNNIFGLSFLKDLNMCG 674

Query: 715 LSKFREFP 722
            S+    P
Sbjct: 675 CSEVFNIP 682


>gi|302819943|ref|XP_002991640.1| hypothetical protein SELMODRAFT_134000 [Selaginella moellendorffii]
 gi|300140489|gb|EFJ07211.1| hypothetical protein SELMODRAFT_134000 [Selaginella moellendorffii]
          Length = 407

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 145/294 (49%), Gaps = 31/294 (10%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TSITE+P S+  L  LE + L  C  L +LP +I  L  L+ ++L+GC  L   P  +  
Sbjct: 11  TSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGE 70

Query: 75  MEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           + +L +L L G  S+ E+P  I  L  L  L ++ C+ L+ LP  I  L  L+ LN+  C
Sbjct: 71  LRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWC 130

Query: 134 CKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL- 191
            KL  +P  +G +  L +L++S    +     +I  +  L+ L+  GC         HL 
Sbjct: 131 EKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCA--------HLK 182

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR- 250
            LP               P +  +  L +LDL  CG G  ++PS+I  L  LK L+LN  
Sbjct: 183 ELP---------------PQIGKLSMLERLDLKKCG-GLTSLPSEIGMLSRLKFLHLNAC 226

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLP-QIPP--NLQFVRANGCSSLVTL 301
                LPA +  + +L EL LE C  L+ LP Q+    +L+ +  +GC+ L +L
Sbjct: 227 TGIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLTSL 280



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 162/367 (44%), Gaps = 71/367 (19%)

Query: 3   SMKDLSDL-YLDGTS---ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLE 58
           S+ +L DL Y+D  +   +  +P SI  L  L+++ L GC++L+SLP  I  L+ LR L 
Sbjct: 19  SLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGELRNLRELV 78

Query: 59  LSGCSKLKKFPQIVASMEDLSKL----------------YLDG---------TSIAEVPS 93
           L+GC  LK+ P  + S+  L+ L                 L G           +A +P 
Sbjct: 79  LAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWCEKLAALPP 138

Query: 94  SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD 153
            +  L  L  L L++CKNL  LP +I  L  LK L+L GC  L+ +P  +GK+  LE LD
Sbjct: 139 QVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKELPPQIGKLSMLERLD 198

Query: 154 VS--GTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALM 208
           +   G     P S I ++  L+ L+ + C    + PA       L    LG   C     
Sbjct: 199 LKKCGGLTSLP-SEIGMLSRLKFLHLNACTGIKQLPAEVGDMRSLVE--LGLEGCTSLKG 255

Query: 209 LPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR----------------- 250
           LP+  G + SL  L L  C  G  ++P+D+ NL SLK L L +                 
Sbjct: 256 LPAQVGQLRSLENLGLDGC-TGLTSLPADVGNLESLKRLSLAKCSALEGLPREVGRLPKL 314

Query: 251 --------NNFVTLPASISGLLNLEELELEDCKRLQSLPQIP-----PNLQFVRANGCSS 297
                    +   +PA +  +  L  L LE C  L S+P  P     PNL+ +    C+ 
Sbjct: 315 KLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIP--PGIFRLPNLELLDLRRCTL 372

Query: 298 LVTLFGA 304
           L    G+
Sbjct: 373 LAQDVGS 379



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 19/237 (8%)

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AI 159
           L+ L L+ C ++  LP S+  L  L+ ++L+ C KL  +P ++G++ +L+ +D++G  ++
Sbjct: 2   LQELVLSVCTSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESL 61

Query: 160 RRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTG- 214
                 I  ++NLR L  +GC      PP   S   HL    L  S C   ++LP   G 
Sbjct: 62  TSLPPEIGELRNLRELVLAGCGSLKELPPEIGSLT-HLTN--LDVSHCEQLMLLPQQIGN 118

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELED 273
           +  L +L++  C    AA+P  +  LH L +L L+   N   LP +I  L  L+ L L  
Sbjct: 119 LTGLRELNMMWCE-KLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRG 177

Query: 274 CKRLQSLP------QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLL 324
           C  L+ LP       +   L   +  G +SL +  G L   R K+  +N    +K L
Sbjct: 178 CAHLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGMLS--RLKFLHLNACTGIKQL 232



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 2/145 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD  ++ EL + I  L  L +L L GC +L+ LP  I  L  L  L+L         P 
Sbjct: 151 LSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKELPPQIGKLSMLERLDLKKCGGLTSLPS 210

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                 +L  +HL   T I+ LPA +  +   +   L+ C +LK LP+ +  LRSL  + 
Sbjct: 211 EIGMLSRLKFLHLNACTGIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLG 270

Query: 783 PSGCSKLKNVTETLGKVESLEVRLS 807
             GC+ L ++   +G +ESL+ RLS
Sbjct: 271 LDGCTGLTSLPADVGNLESLK-RLS 294



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 662 QVLSDGTDIRELSLA-----------IELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           Q + + T +REL++            +  L  L  L L+ CKNL  LP TI  L  L  L
Sbjct: 114 QQIGNLTGLRELNMMWCEKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRL 173

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           +L G +  +E P        L  + L+    +  LP+ I +LS     +L  C  +K LP
Sbjct: 174 HLRGCAHLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQLP 233

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           + +  +RSL  +   GC+ LK +   +G++ SLE
Sbjct: 234 AEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLE 267



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 1/125 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-G 738
           L  L +L L GC +L+ LP  I +L +L+ L++S   +    P+   +   L E+++   
Sbjct: 71  LRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWC 130

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L       L DCKNL  LP TI  L  L+ ++  GC+ LK +   +GK
Sbjct: 131 EKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKELPPQIGK 190

Query: 799 VESLE 803
           +  LE
Sbjct: 191 LSMLE 195



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++EL   I  L  L +L L  C  L  LP  I  L  L  L+L+  +  ++ P       
Sbjct: 181 LKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQLPAEVGDMR 240

Query: 730 QLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L+E+ LEG T+++GLPA +  L       L  C  L SLP+ +  L SL+ +  + CS 
Sbjct: 241 SLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLTSLPADVGNLESLKRLSLAKCSA 300

Query: 789 LKNVTETLG 797
           L+ +   +G
Sbjct: 301 LEGLPREVG 309



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 26/140 (18%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  M+ L +L L+G TS+  +P+ +  L  LE L L GC  L+SLP  + +L+ L+ L L
Sbjct: 236 VGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLTSLPADVGNLESLKRLSL 295

Query: 60  SGCSKLKKFPQIVAS------------------------MEDLSKLYLDG-TSIAEVPSS 94
           + CS L+  P+ V                          ++ L  L L+G TS++ +P  
Sbjct: 296 AKCSALEGLPREVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIPPG 355

Query: 95  IELLPGLELLYLNECKNLVR 114
           I  LP LELL L  C  L +
Sbjct: 356 IFRLPNLELLDLRRCTLLAQ 375



 Score = 39.3 bits (90), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 23/120 (19%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L +L L+ C ++  LP+++  L  L  ++L+   K                       + 
Sbjct: 2   LQELVLSVCTSITELPQSLGNLHDLEYVDLAACFK-----------------------LM 38

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L    + +L  C++L SLP  I  LR+LR +  +GC  LK +   +G +  L
Sbjct: 39  ALPRSIGRLMALKVMDLTGCESLTSLPPEIGELRNLRELVLAGCGSLKELPPEIGSLTHL 98


>gi|224127230|ref|XP_002329432.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870482|gb|EEF07613.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1136

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 209/459 (45%), Gaps = 62/459 (13%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
            LR ++LS    L + P +  +   +S    D  S+ EVPSS++ L  LE +YL  C NL 
Sbjct: 666  LRRIDLSDSPYLTELPDLSMAKNLVSLDLTDCPSLTEVPSSLQYLDKLEKIYLFRCYNLR 725

Query: 114  RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
              P  +   K L+ L +S C  +   P      +++E L +  T+I+    S+     L 
Sbjct: 726  SFP--MLDSKVLRFLLISRCLDVTTCPTI---SQNMEWLWLEQTSIKEVPQSV--TGKLE 778

Query: 174  SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC----GLG 229
             L  SGC  P  +    +     +L      +  +  S+  +  L  LD+S C     L 
Sbjct: 779  RLCLSGC--PEITKFPEISGDIEILDLRGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLP 836

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPAS-ISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            E  +P  +++LHSLK   L++     +P+S I  +++L  L L D   +++LP++PP+L+
Sbjct: 837  EITVP--MESLHSLK---LSKTGIKEIPSSLIKHMISLTFLNL-DGTPIKALPELPPSLR 890

Query: 289  FVRANGCSSLVTLFGALKLCRSKYTI--INCIDSLKLLRKNGLAISMLREYLELQAVSD- 345
            ++  + C+SL T+  ++ + R +  +   NC      L +  L  +M   +L++Q+  + 
Sbjct: 891  YLTTHDCASLETVTSSINIGRLELGLDFTNCFK----LDQKPLVAAM---HLKIQSGEEI 943

Query: 346  PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP------- 398
            P   + +V PGS+IP+WF  +  GSS+T+  PS   N +++ G A C VF +P       
Sbjct: 944  PDGGIQMVLPGSEIPEWFGDKGIGSSLTMQLPS---NCHQLKGIAFCLVFLLPLPSHDMP 1000

Query: 399  ---KHSTGTYLFHSYPAHELECSMDGSGE-----GHYIYFRGKFGHVVSDHLWLLFLPRH 450
                      L+  Y         DG  E     G   +   K     SDH+ L     H
Sbjct: 1001 YEVDDDIDVNLYLDYHVKSKNGEHDGDDEVVLASGERCHLTSKMKTCDSDHMVL-----H 1055

Query: 451  GHNWQFESNLI-RLSFRSISDPTWKVKRCGFHPIYMHEV 488
                ++E  L+ RL   S ++ T+K         Y HEV
Sbjct: 1056 YMALRYELELVNRLRKYSGNEVTFK--------FYHHEV 1086



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 30/235 (12%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+TEVPSS++ L  LE + L  C NL S P+  S  K LR L +S C  +   P I 
Sbjct: 696 DCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSFPMLDS--KVLRFLLISRCLDVTTCPTIS 753

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR------------------ 114
            +ME    L+L+ TSI EVP S+     LE L L+ C  + +                  
Sbjct: 754 QNME---WLWLEQTSIKEVPQSVT--GKLERLCLSGCPEITKFPEISGDIEILDLRGTAI 808

Query: 115 --LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             +PSSI  L  L+ L++SGC KLE++P+    +ESL  L +S T I+   SS  L+K++
Sbjct: 809 KEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSS--LIKHM 866

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT-KLDLSDC 226
            SL F   +  P  A   L      L    C     + S   +  L   LD ++C
Sbjct: 867 ISLTFLNLDGTPIKALPELPPSLRYLTTHDCASLETVTSSINIGRLELGLDFTNC 921



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 90/165 (54%), Gaps = 8/165 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L GT+I EVPSSI+ LT LE+L + GC  L SLP     ++ L +L+LS  + +
Sbjct: 797 DIEILDLRGTAIKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSK-TGI 855

Query: 66  KKFP-QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           K+ P  ++  M  L+ L LDGT I  +P   EL P L  L  ++C +L  + SSIN  + 
Sbjct: 856 KEIPSSLIKHMISLTFLNLDGTPIKALP---ELPPSLRYLTTHDCASLETVTSSINIGRL 912

Query: 125 LKTLNLSGCCKLENVPDTLG---KVESLEELDVSGTAIRRPTSSI 166
              L+ + C KL+  P       K++S EE+   G  +  P S I
Sbjct: 913 ELGLDFTNCFKLDQKPLVAAMHLKIQSGEEIPDGGIQMVLPGSEI 957



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 34/179 (18%)

Query: 631 WGRQTVRRQSPQE-PGNCSRLW----EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQ 685
           W  QT  ++ PQ   G   RL      E  +FP             E+S  IE+L     
Sbjct: 760 WLEQTSIKEVPQSVTGKLERLCLSGCPEITKFP-------------EISGDIEIL----- 801

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
             L G   ++ +P +I  L  L  L++SG SK    PEIT   + L  + L  T I+ +P
Sbjct: 802 -DLRGTA-IKEVPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIP 859

Query: 746 ASI--ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET--LGKVE 800
           +S+   ++S   L NL D   +K+LP       SLR +    C+ L+ VT +  +G++E
Sbjct: 860 SSLIKHMISLTFL-NL-DGTPIKALPELPP---SLRYLTTHDCASLETVTSSINIGRLE 913


>gi|105923139|gb|ABF81459.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1421

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 143/297 (48%), Gaps = 34/297 (11%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            ++ +L+ L +  +++ E+    ++L  L++L L   KNL   P   SS   L  L+L GC
Sbjct: 789  TLDNLAVLDMQYSNLKELWKGQKILNRLKILNLNHSKNLIKTPNLHSS--SLEKLKLKGC 846

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            S                       S+ EV  SIE L  L  L L  C NL  LP SI  +
Sbjct: 847  S-----------------------SLVEVHQSIENLTSLVFLNLEGCWNLKILPESIGNV 883

Query: 123  KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            KSL+TLN+SGC +LE +P+ +G +ESL EL   G    +  +SI  +K++R L   G + 
Sbjct: 884  KSLETLNISGCSQLEKLPECMGDMESLTELLADGIENEQFLTSIGQLKHVRRLSLCGYSS 943

Query: 183  PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP-SDIDNLH 241
             P S+S +     N            LP+  G   +  L+LS+ GL +      D   L 
Sbjct: 944  APPSSSLNSAGVLNW--------KQWLPTSFGWRLVNHLELSNGGLSDRTTNCVDFSGLS 995

Query: 242  SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            +L+ L L RN F +LP+ I  L  L  L +  C+ L S+  +P +L  + A+ C SL
Sbjct: 996  ALEVLDLTRNKFSSLPSGIGFLPKLRRLFVLACEYLVSILDLPSSLDCLVASHCKSL 1052



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 57/226 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEF--------PDIVQVL------SDGTDIRELSLAI 677
           GR+ VR  SP+EPG  +R+W + D +         D+V+ L      S+   +   S A 
Sbjct: 687 GREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAKSLSTRSFAK 746

Query: 678 ELLFGLVQLT---LNGC-------------------------------------KNLERL 697
                L+Q+    L G                                       NL+ L
Sbjct: 747 MKRLNLLQINGAHLTGSFKLLSKELMWICWLQCPLKYFSSDFTLDNLAVLDMQYSNLKEL 806

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNIL 756
            +    L  L  LNL+      + P + SS   L ++ L+G +++  +  SIE L+  + 
Sbjct: 807 WKGQKILNRLKILNLNHSKNLIKTPNLHSS--SLEKLKLKGCSSLVEVHQSIENLTSLVF 864

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            NL+ C NLK LP +I  ++SL  +  SGCS+L+ + E +G +ESL
Sbjct: 865 LNLEGCWNLKILPESIGNVKSLETLNISGCSQLEKLPECMGDMESL 910



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 39/67 (58%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +IE L  LV L L GC NL+ LP +I  +K L TLN+SG S+  + PE     + L
Sbjct: 851 EVHQSIENLTSLVFLNLEGCWNLKILPESIGNVKSLETLNISGCSQLEKLPECMGDMESL 910

Query: 732 LEIHLEG 738
            E+  +G
Sbjct: 911 TELLADG 917


>gi|296090136|emb|CBI39955.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 93/179 (51%), Gaps = 17/179 (9%)

Query: 19  EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
           E+  SI  L GL+ L L+ CK+LS LP +I  LK L  L L+GCS L+ F +I   ME L
Sbjct: 82  ELLCSIGHLIGLQHLDLENCKDLSGLPSSIYGLKYLFELSLNGCSNLEAFSEIRFDMEHL 141

Query: 79  SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
             L L G  I E+PSSIE L  L  L L  C+NLV LP+SI  L  L TL +  C KL  
Sbjct: 142 YNLRLSGMVITELPSSIERLTNLADLELTNCENLVTLPNSIGNLTGLVTLRVRNCSKLHK 201

Query: 139 VPDT-----------------LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           +PD                  L ++ SLE LDVS   I R  +    + NL  L+ + C
Sbjct: 202 LPDNLRSLQHCNLMEGAIPNDLWRLSSLEFLDVSENHIHRIPAGSIQLSNLTELHMNHC 260



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 140/305 (45%), Gaps = 32/305 (10%)

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           E+  SI  L GL+ L L  CK+L  LPSSI GLK L  L+L+GC  LE   +    +E L
Sbjct: 82  ELLCSIGHLIGLQHLDLENCKDLSGLPSSIYGLKYLFELSLNGCSNLEAFSEIRFDMEHL 141

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
             L +SG  I    SSI  + NL  L  + C          + LP N +G  +  V L +
Sbjct: 142 YNLRLSGMVITELPSSIERLTNLADLELTNCENL-------VTLP-NSIGNLTGLVTLRV 193

Query: 210 PSLTGVCSLTK--LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
            + + +  L      L  C L E AIP+D+  L SL+ L ++ N+   +PA    L NL 
Sbjct: 194 RNCSKLHKLPDNLRSLQHCNLMEGAIPNDLWRLSSLEFLDVSENHIHRIPAGSIQLSNLT 253

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN 327
           EL +  C  L+ + ++P +L+ + A+GC  L TL          Y ++NC  S     + 
Sbjct: 254 ELHMNHCLMLEEIHKLPSSLRVIEAHGCPCLETLLSDPTHLFWSY-LLNCFKS-----QT 307

Query: 328 GLAISMLREYLELQAVSDPGHKLSIVFPGSQ-IPKWFMYQNEGSSITVTRPSYLYNVNKV 386
                 +R               +I+ PGS  IP+W   ++ G  + +  P   Y     
Sbjct: 308 EWIFPEIR---------------NIIIPGSSGIPEWVRDKSMGYEVRIAFPKSWYQDYNF 352

Query: 387 VGFAI 391
           +GFA+
Sbjct: 353 LGFAL 357



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 69/130 (53%)

Query: 671 RELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQ 730
           +EL  +I  L GL  L L  CK+L  LP +I  LKYL  L+L+G S    F EI    + 
Sbjct: 81  QELLCSIGHLIGLQHLDLENCKDLSGLPSSIYGLKYLFELSLNGCSNLEAFSEIRFDMEH 140

Query: 731 LLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           L  + L G  I  LP+SIE L+      L +C+NL +LP++I  L  L  +    CSKL 
Sbjct: 141 LYNLRLSGMVITELPSSIERLTNLADLELTNCENLVTLPNSIGNLTGLVTLRVRNCSKLH 200

Query: 791 NVTETLGKVE 800
            + + L  ++
Sbjct: 201 KLPDNLRSLQ 210



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 10/148 (6%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M+ L +L L G  ITE+PSSIE LT L  L L  C+NL +LP +I +L  L TL +  CS
Sbjct: 138 MEHLYNLRLSGMVITELPSSIERLTNLADLELTNCENLVTLPNSIGNLTGLVTLRVRNCS 197

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           KL K P  + S++  +   ++G     +P+ +  L  LE L ++E  ++ R+P+    L 
Sbjct: 198 KLHKLPDNLRSLQHCN--LMEGA----IPNDLWRLSSLEFLDVSE-NHIHRIPAGSIQLS 250

Query: 124 SLKTLNLSGCCKLENV---PDTLGKVES 148
           +L  L+++ C  LE +   P +L  +E+
Sbjct: 251 NLTELHMNHCLMLEEIHKLPSSLRVIEA 278



 Score = 39.3 bits (90), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 9/81 (11%)

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWNRPKMQN 816
           +L++CK+L  LPS+I GL+ L  +  +GCS L+  +E    +E L  +RLS     ++  
Sbjct: 97  DLENCKDLSGLPSSIYGLKYLFELSLNGCSNLEAFSEIRFDMEHLYNLRLSGMVITEL-- 154

Query: 817 DFDCVEQSAVETVTKLAKAEL 837
                  S++E +T LA  EL
Sbjct: 155 ------PSSIERLTNLADLEL 169


>gi|359493349|ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 208/486 (42%), Gaps = 76/486 (15%)

Query: 51   LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
             K L+ ++LS    L + P   + + +L  L  +G T + ++ SS+  L  L  L    C
Sbjct: 637  FKNLKYIDLSDSKYLAETPDF-SRVTNLKMLSFEGCTQLHKIHSSLGDLDKLCRLNFKNC 695

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
             NL   P  ++ L SL+ LNLSGC KLE  P     +  L +L   GTAI    SSI   
Sbjct: 696  INLEHFPG-LDQLVSLEALNLSGCSKLEKFPVISQPMHCLSKLCFDGTAITELPSSIAYA 754

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD---LSDC 226
              L  L    C +                        L LPS   +C L  L+   LS C
Sbjct: 755  TKLVVLDLQNCEK-----------------------LLSLPS--SICKLAHLETLSLSGC 789

Query: 227  G-LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
              LG+  + SD               N   LP  +  L +L EL+L+DC+ L++LP +P 
Sbjct: 790  SRLGKPQVNSD---------------NLDALPRILDRLSHLRELQLQDCRSLRALPPLPS 834

Query: 286  NLQFVRA-NGCSSLVTLF-GALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL--- 340
            +++ + A + C+SL  +   ++ LC       NC    K   K G  +  +  + +    
Sbjct: 835  SMELINASDNCTSLEYISPQSVFLCFGGSIFGNCFQLTKYQSKMGPHLRRMATHFDQDRW 894

Query: 341  -----QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
                 Q   +     S VFPGS IP WFM+ ++G  + +      Y+ +  +GFA+  V 
Sbjct: 895  KSAYDQQYPNVQVPFSTVFPGSTIPDWFMHYSKGHEVDIDVDPDWYD-SSFLGFALSAVI 953

Query: 396  QVPKHSTGTYLFHSY---PAHELECSMDGSGEGHYI--YFRGKFGH-----VVSDHLWLL 445
              PK  + T  + +Y     H+L    +   E  ++  +   +        + SDHLWL 
Sbjct: 954  -APKDGSITRGWSTYCNLDLHDLNSESESESESSWVCSFTDARTCQLEDTTINSDHLWLA 1012

Query: 446  FLPRH-GHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTS- 503
            ++P   G N +  S  I+ SF S S  +  VK  G  P+Y+      D+   +   ++S 
Sbjct: 1013 YVPSFLGFNDKKWSR-IKFSF-STSRKSCIVKHWGVCPLYIEGSS--DDNYNRDGDYSSG 1068

Query: 504  -CNLNE 508
             C LNE
Sbjct: 1069 RCCLNE 1074



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 82/150 (54%), Gaps = 11/150 (7%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + ++ SS+  L  L  L  K C NL   P  +  L  L  L LSGCSKL+KFP I   
Sbjct: 672 TQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLEALNLSGCSKLEKFPVISQP 730

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  LSKL  DGT+I E+PSSI     L +L L  C+ L+ LPSSI  L  L+TL+LSGC 
Sbjct: 731 MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCS 790

Query: 135 K----------LENVPDTLGKVESLEELDV 154
           +          L+ +P  L ++  L EL +
Sbjct: 791 RLGKPQVNSDNLDALPRILDRLSHLRELQL 820



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 1/122 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + ++  ++  L  L +L    C NLE  P  +  L  L  LNLSG SK  +FP I+  
Sbjct: 672 TQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLEALNLSGCSKLEKFPVISQP 730

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L ++  +GTAI  LP+SI   +  ++ +L++C+ L SLPS+I  L  L  +  SGCS
Sbjct: 731 MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCS 790

Query: 788 KL 789
           +L
Sbjct: 791 RL 792



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 13/113 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  LS L  DGT+ITE+PSSI   T L +L L+ C+ L SLP +I  L  L TL LSGCS
Sbjct: 731 MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCS 790

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           +L K PQ+            +  ++  +P  ++ L  L  L L +C++L  LP
Sbjct: 791 RLGK-PQV------------NSDNLDALPRILDRLSHLRELQLQDCRSLRALP 830



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 53/209 (25%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VRR SP+EPG  +RLWE+     DI  VL   T   E+ +    L GL ++    C
Sbjct: 494 GKEIVRRTSPKEPGKRTRLWEQQ----DICHVLEKNTGTDEVEVIDFNLSGLKEI----C 545

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL--------------- 736
              E     +S L+ L+ ++ S LS   E     SSR    ++H+               
Sbjct: 546 FTTEAFG-NMSKLRLLA-IHESSLSDDSE----CSSRLMQCQVHISDDFKFHYDELRFLL 599

Query: 737 -EGTAIRGLPASIE----------------LLSGN-ILSNLK-----DCKNLKSLPSTIN 773
            E   ++ LP+  +                L  GN +  NLK     D K L   P   +
Sbjct: 600 WEEYPLKSLPSDFKSQNLVYLSMTKSHLTRLWEGNKVFKNLKYIDLSDSKYLAETPD-FS 658

Query: 774 GLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            + +L+M+   GC++L  +  +LG ++ L
Sbjct: 659 RVTNLKMLSFEGCTQLHKIHSSLGDLDKL 687


>gi|297846862|ref|XP_002891312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337154|gb|EFH67571.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1159

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 224/531 (42%), Gaps = 131/531 (24%)

Query: 15   TSITEVPSSIELLTGLELLTLKG-----------CKNLSSLPVTISSLKCLRTLELSGCS 63
            +S+ E+PSS+   T LE L L             C +L  LP +I +   L+  ++SGCS
Sbjct: 646  SSLVELPSSVGKATKLEELELGNATNLKELYLYNCSSLVKLPFSIGTFSHLKKFKISGCS 705

Query: 64   KLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI-NG 121
             L K    + +  DL +L     +S+ E+PS I     LELL L  C NLV+LPSSI N 
Sbjct: 706  NLVKLSSSIGNATDLKELDFSFCSSLVELPSYIGNATNLELLDLRGCSNLVQLPSSIGNA 765

Query: 122  LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
            + +L  L+ SGC  L  +P ++GK  +L+ L+ SG +++    +SI  +  L SL  + C
Sbjct: 766  IVTLDRLDFSGCSSLVAIPSSIGKAINLKYLEFSGYSSLVELPASIGNLHKLSSLTLNRC 825

Query: 181  NEPPASASWHLHLPFNL-------LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
            ++          LP N+       L  + C +    P ++   +++ LDLS   + E  +
Sbjct: 826  SKLEV-------LPININLQSLEALILTDCSLLKSFPEIS--TNISYLDLSGTAIEEVPL 876

Query: 234  P----SDIDNLHS---------------LKELYLNRNNFVTLPASISGLLNLEELELEDC 274
                 S ++ LH                + +L+L+      +   +  +  L  L L+ C
Sbjct: 877  SISLWSRLETLHMSYSENLKNFPHALDIITDLHLSDTKIQEVAPWVKRISRLRRLVLKGC 936

Query: 275  KRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISML 334
             +L SLPQ+P +L  + A  C SL  L  +    +++  II         + +   +S+L
Sbjct: 937  NKLLSLPQLPDSLSELDAENCESLERLDCSFLDPQARNVII---------QTSTCEVSVL 987

Query: 335  REYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVT---RPS----------YLY 381
                                PG ++P +F Y+  G S+ V    RP            L 
Sbjct: 988  --------------------PGREMPTYFTYRANGDSLRVKLNERPFPSSLIFKACILLV 1027

Query: 382  NVNKV------VGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFG 435
            N N V      + F  CC+  V K S+           ++ CS                 
Sbjct: 1028 NNNDVETGDEDIVFLDCCI--VDKKSSV----------DVPCS----------------- 1058

Query: 436  HVVSDHLWLLFLPRHGHNWQFESNLIR--LSFR-SISDPTWKVKRCGFHPI 483
               S+H+    L  H + ++FE+++    L F  SIS   W +K CG H +
Sbjct: 1059 --PSNHILPPPLTEHLYIFEFEADVTSNDLFFEFSISSVRWVIKECGVHNV 1107



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 143/297 (48%), Gaps = 39/297 (13%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA- 73
           +S+ ++P SI     LE+L L  C NL  LP +I +L  ++      CS L + P  V  
Sbjct: 598 SSLVKLPFSIGNAINLEILNLYDCSNLVELPSSIGNLINIKKFNFRRCSSLVELPSSVGK 657

Query: 74  ----------SMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
                     +  +L +LYL + +S+ ++P SI     L+   ++ C NLV+L SSI   
Sbjct: 658 ATKLEELELGNATNLKELYLYNCSSLVKLPFSIGTFSHLKKFKISGCSNLVKLSSSIGNA 717

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGC 180
             LK L+ S C  L  +P  +G   +LE LD+ G +  ++ P+S    +  L  L FSGC
Sbjct: 718 TDLKELDFSFCSSLVELPSYIGNATNLELLDLRGCSNLVQLPSSIGNAIVTLDRLDFSGC 777

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           +   A  S         +GK+   + L     +G  SL +L            P+ I NL
Sbjct: 778 SSLVAIPSS--------IGKA---INLKYLEFSGYSSLVEL------------PASIGNL 814

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           H L  L LNR +    LP +I+ L +LE L L DC  L+S P+I  N+ ++  +G +
Sbjct: 815 HKLSSLTLNRCSKLEVLPININ-LQSLEALILTDCSLLKSFPEISTNISYLDLSGTA 870



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 4/117 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            S  + + EL  +I  L  L  LTLN C  LE LP  I+ L+ L  L L+  S  + FPE
Sbjct: 798 FSGYSSLVELPASIGNLHKLSSLTLNRCSKLEVLPININ-LQSLEALILTDCSLLKSFPE 856

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           I+++   L    L GTAI  +P SI L S     ++   +NLK+ P  ++ +  L +
Sbjct: 857 ISTNISYL---DLSGTAIEEVPLSISLWSRLETLHMSYSENLKNFPHALDIITDLHL 910



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L L  C +L +LP +I    +L    +SG S   +      +   L E+     +++
Sbjct: 672 LKELYLYNCSSLVKLPFSIGTFSHLKKFKISGCSNLVKLSSSIGNATDLKELDFSFCSSL 731

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTI-NGLRSLRMMYPSGCSKLKNVTETLGKVE 800
             LP+ I   +   L +L+ C NL  LPS+I N + +L  +  SGCS L  +  ++GK  
Sbjct: 732 VELPSYIGNATNLELLDLRGCSNLVQLPSSIGNAIVTLDRLDFSGCSSLVAIPSSIGKAI 791

Query: 801 SLE 803
           +L+
Sbjct: 792 NLK 794



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L +   K LE+L   I  L+ L  ++LS     +  P+++++ + L E+     +++
Sbjct: 543 LVELVMCHSK-LEKLWEGIKPLRNLKWMDLSSSVNLKVLPDLSTATN-LKELDCSFCSSL 600

Query: 742 RGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             LP SI    GN ++    NL DC NL  LPS+I  L +++      CS L  +  ++G
Sbjct: 601 VKLPFSI----GNAINLEILNLYDCSNLVELPSSIGNLINIKKFNFRRCSSLVELPSSVG 656

Query: 798 KVESLE 803
           K   LE
Sbjct: 657 KATKLE 662


>gi|15227238|ref|NP_179024.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251184|gb|AEC06278.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1215

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 155/296 (52%), Gaps = 14/296 (4%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +L + G+ + ++   I+ L  L+ + L   KNL  LP  +SS   L  L L+GCS L 
Sbjct: 653 LVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSSLV 711

Query: 67  KFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           + P  + +   L KL L G +S+ E+PSSI     L+ +  + C+NLV LPSSI    +L
Sbjct: 712 ELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNL 771

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELD-VSGTAIRRPTSSIFLMKNLRSLYFSGCN--- 181
           K L+LS C  L+ +P ++G   +L++L  +  ++++   SSI    NL+ L+ + C+   
Sbjct: 772 KELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLI 831

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE--AAIPSDIDN 239
           + P+S    ++L   +L  + C   + LPS  G    T L + + G       +PS I N
Sbjct: 832 KLPSSIGNAINLEKLIL--AGCESLVELPSFIG--KATNLKILNLGYLSCLVELPSFIGN 887

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
           LH L EL L        LP +I+ L  L EL+L DC  L++ P I  N++ +   G
Sbjct: 888 LHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKTFPVISTNIKRLHLRG 942



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 43/384 (11%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ E+PSSI     L+ +    C+NL  LP +I +   L+ L+LS CS LK+ P  + +
Sbjct: 732  SSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGN 791

Query: 75   MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
              +L KL+L   +S+ E+PSSI     L+ L+L  C +L++LPSSI    +L+ L L+GC
Sbjct: 792  CTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGC 851

Query: 134  CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
              L  +P  +GK  +L+ L++   + +    S I  +  L  L   GC +     + +++
Sbjct: 852  ESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVLPT-NIN 910

Query: 193  LPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN---LHSLKELY- 247
            L F N L  + C +    P ++   ++ +L L    + E  +PS + +   L  L+ LY 
Sbjct: 911  LEFLNELDLTDCILLKTFPVIS--TNIKRLHLRGTQIEE--VPSSLRSWPRLEDLQMLYS 966

Query: 248  -----------------LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
                             L+  N   +   ++ +  L  L+L  C +L SLPQ+  +L  +
Sbjct: 967  ENLSEFSHVLERITVLELSDINIREMTPWLNRITRLRRLKLSGCGKLVSLPQLSDSLIIL 1026

Query: 291  RANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL 350
             A  C SL  L      C      I C+D    L+ +  A  ++     +QA +    + 
Sbjct: 1027 DAENCGSLERLG-----CSFNNPNIKCLDFTNCLKLDKEARDLI-----IQATA----RH 1072

Query: 351  SIVFPGSQIPKWFMYQNEGSSITV 374
              + P  ++ ++   +  GSS+TV
Sbjct: 1073 YSILPSREVHEYITNRAIGSSLTV 1096



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 13/235 (5%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E L +L + G+ + ++   I+ L  L+ + L   KNL  LP  ++   +L+ LNL+GC  
Sbjct: 651 EFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSS 709

Query: 136 LENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHL 191
           L  +P ++G    L +L++SG +++    SSI    NL+++ FS C    E P+S     
Sbjct: 710 LVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNAT 769

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCS-LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN- 249
           +L    L  S C     LPS  G C+ L KL L  C      +PS I N  +LKEL+L  
Sbjct: 770 NL--KELDLSCCSSLKELPSSIGNCTNLKKLHLICCS-SLKELPSSIGNCTNLKELHLTC 826

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGCSSLVTL 301
            ++ + LP+SI   +NLE+L L  C+ L  LP       NL+ +     S LV L
Sbjct: 827 CSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVEL 881



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+ + +L   I+ L  L ++ L   KNL+ LP  +S+   L  LNL+G S   E P    
Sbjct: 660 GSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIG 718

Query: 727 SRDQLLEIHLEG-TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMM 781
           +  +LL++ L G +++  LP+SI    GN ++    +   C+NL  LPS+I    +L+ +
Sbjct: 719 NATKLLKLELSGCSSLLELPSSI----GNAINLQTIDFSHCENLVELPSSIGNATNLKEL 774

Query: 782 YPSGCSKLKNVTETLGKVESLE 803
             S CS LK +  ++G   +L+
Sbjct: 775 DLSCCSSLKELPSSIGNCTNLK 796



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 26/165 (15%)

Query: 656 EFPDIVQVLSDGTDIRELSL-----AIELLFG------LVQLTLNGCKNLERLPRTISAL 704
           E PD    LS  T++  L+L      +EL F       L++L L+GC +L  LP +I   
Sbjct: 689 ELPD----LSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNA 744

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-- 761
             L T++ S      E P    +   L E+ L   ++++ LP+SI    GN  +NLK   
Sbjct: 745 INLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSI----GNC-TNLKKLH 799

Query: 762 ---CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              C +LK LPS+I    +L+ ++ + CS L  +  ++G   +LE
Sbjct: 800 LICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLE 844



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  +I     L  +  + C+NL  LP +I     L  L+LS  S  +E P 
Sbjct: 728 LSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPS 787

Query: 724 ITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRS 777
              +   L ++HL   ++++ LP+SI    GN  +NLK+     C +L  LPS+I    +
Sbjct: 788 SIGNCTNLKKLHLICCSSLKELPSSI----GNC-TNLKELHLTCCSSLIKLPSSIGNAIN 842

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLEV 804
           L  +  +GC  L  +   +GK  +L++
Sbjct: 843 LEKLILAGCESLVELPSFIGKATNLKI 869



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 25/129 (19%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           EL   I  L  L +L L GCK L+ LP  I+ L++L+ L+L+     + FP I+++  +L
Sbjct: 880 ELPSFIGNLHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKTFPVISTNIKRL 938

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
              HL GT I  +P+S                 L+S P     L  L+M+Y    S+  +
Sbjct: 939 ---HLRGTQIEEVPSS-----------------LRSWPR----LEDLQMLYSENLSEFSH 974

Query: 792 VTETLGKVE 800
           V E +  +E
Sbjct: 975 VLERITVLE 983



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 11/144 (7%)

Query: 638 RQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
           ++ P   GNC+ L E           L+  + + +L  +I     L +L L GC++L  L
Sbjct: 807 KELPSSIGNCTNLKELH---------LTCCSSLIKLPSSIGNAINLEKLILAGCESLVEL 857

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNIL 756
           P  I     L  LNL  LS   E P    +  +L E+ L G   ++ LP +I L   N L
Sbjct: 858 PSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNINLEFLNEL 917

Query: 757 SNLKDCKNLKSLPSTINGLRSLRM 780
            +L DC  LK+ P     ++ L +
Sbjct: 918 -DLTDCILLKTFPVISTNIKRLHL 940


>gi|297790458|ref|XP_002863119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308943|gb|EFH39378.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1121

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 172/370 (46%), Gaps = 63/370 (17%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+  +PSSI   T LELL L GC +L  LP +I +L  L+ L+LS  S L + P  + +
Sbjct: 712  SSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLSCLVELPFSIGN 771

Query: 75   MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            + +L  L L   S + E+P SI     LE+L L +C NLV+LP SI  L+ L+TLNL GC
Sbjct: 772  LINLKVLNLSSLSCLVELPFSIGNATNLEVLNLRQCSNLVKLPFSIGNLQKLQTLNLRGC 831

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS-ASW--- 189
             KLE +P  + K+ SL  LD++   + +    I        L  +   E P+S  SW   
Sbjct: 832  SKLEVLPANI-KLGSLWSLDLTDCILLKRFPEISTNVGFIWLIGTTIEEVPSSIKSWSRP 890

Query: 190  ---HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
               H+    NL    + P A  +        +T+L +++  + E                
Sbjct: 891  NEVHMSYSENL---KNFPHAFDI--------ITRLQVTNTEIQE---------------- 923

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
                     +P  ++    L  L+L+ CK+L SLPQIP ++  + A  C SL  L     
Sbjct: 924  ---------VPPWVNKFSRLTVLKLKGCKKLVSLPQIPDSISDIDAEDCESLERL----- 969

Query: 307  LCRSKYTIINC-IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMY 365
                     +C   +  +  K      + +E  +L  +  P  K S V PG ++P +F +
Sbjct: 970  ---------DCSFHNPNIWLKFAKCFKLNQEARDL-IIQTPTSK-SAVLPGREVPAYFTH 1018

Query: 366  QN-EGSSITV 374
            Q+  G S+T+
Sbjct: 1019 QSTTGGSLTI 1028



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 26/132 (19%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSK-------------- 717
           EL  +I     L  L L  C NL +LP +I  L+ L TLNL G SK              
Sbjct: 788 ELPFSIGNATNLEVLNLRQCSNLVKLPFSIGNLQKLQTLNLRGCSKLEVLPANIKLGSLW 847

Query: 718 ---------FREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
                     + FPEI+++   +  I L GT I  +P+SI+  S     ++   +NLK+ 
Sbjct: 848 SLDLTDCILLKRFPEISTN---VGFIWLIGTTIEEVPSSIKSWSRPNEVHMSYSENLKNF 904

Query: 769 PSTINGLRSLRM 780
           P   + +  L++
Sbjct: 905 PHAFDIITRLQV 916



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 23/119 (19%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           EL  +I  L  L +L L+    L  LP +I  L  L  LNLS LS   E P         
Sbjct: 740 ELPSSIGNLINLKELDLSSLSCLVELPFSIGNLINLKVLNLSSLSCLVELPFSI------ 793

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
                      G   ++E+L      NL+ C NL  LP +I  L+ L+ +   GCSKL+
Sbjct: 794 -----------GNATNLEVL------NLRQCSNLVKLPFSIGNLQKLQTLNLRGCSKLE 835



 Score = 40.4 bits (93), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLE 267
           LP L+   +L  L+L  C      +PS I N  +L+ LYL   ++ V LP+SI  L+NL+
Sbjct: 694 LPDLSTATNLRTLNLRYCS-SLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLK 752

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           EL+L     L  LP    NL  ++    SSL  L
Sbjct: 753 ELDLSSLSCLVELPFSIGNLINLKVLNLSSLSCL 786



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 26/127 (20%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L +  C  LE+L   I  L  L  ++LS     +E P+++++           T +R
Sbjct: 657 LVELDMR-CSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTA-----------TNLR 704

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L             NL+ C +L +LPS+I    +L ++Y  GCS L  +  ++G + +L
Sbjct: 705 TL-------------NLRYCSSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINL 751

Query: 803 -EVRLSS 808
            E+ LSS
Sbjct: 752 KELDLSS 758


>gi|297790638|ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309038|gb|EFH39463.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 916

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 173/367 (47%), Gaps = 34/367 (9%)

Query: 50  SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELL-PGLELLYLN 107
           SLK L+ L+LS   +L   P   +++ +L KL L +  S+  V  SI  L   L LL L 
Sbjct: 548 SLKELKYLDLSHSIQLTDTPDF-SNLPNLEKLLLINCKSLVRVHKSIGTLHEKLILLNLK 606

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
           +C  L  LP  +  LKSL+TL +SGC KLE + + L  ++SL  L  + TAI   T   +
Sbjct: 607 DCTKLGDLPLELYMLKSLETLIVSGCVKLERLDNALRDMKSLTTLKANYTAI---TQIPY 663

Query: 168 LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
           +   L  L   GC E      W +    +        ++L+ P L  +  L  L L  C 
Sbjct: 664 MSNQLEELSLDGCKE-----LWKVRDNTHSDESPQATLSLLFP-LNVISCLKTLRLGSCN 717

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           L +  +P ++ +L  L+EL L  NNF  L    +GL +L+ L+++ C  LQS+  +P  L
Sbjct: 718 LSDELVPKNLGSLSCLEELDLQGNNFRNLQMDFAGLSSLQILKVDSCSELQSMFSLPKRL 777

Query: 288 QFVRANGCSSL--------VTLFGALKLCRSKYTIINC--IDSLKLLRK------NGLAI 331
           +   A+ C  L         ++  +L L    + ++    +D LK +        N ++ 
Sbjct: 778 RSFYASNCIMLERTPDLSECSVLQSLHLTNC-FNLVETPGLDKLKTVGVIHMEMCNRIST 836

Query: 332 SMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
                 ++  AV   G    I  PGS +P W  ++NE  SI+ T P  L N + +VGF +
Sbjct: 837 DYRESIMQGWAVGANG---GIFIPGSSVPNWVSFKNERHSISFTVPESL-NAD-LVGFTL 891

Query: 392 CCVFQVP 398
             + + P
Sbjct: 892 WLLLKNP 898



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 29/238 (12%)

Query: 10  LYLDGTSITEVPSSIELL-TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L ++  S+  V  SI  L   L LL LK C  L  LP+ +  LK L TL +SGC KL++ 
Sbjct: 579 LLINCKSLVRVHKSIGTLHEKLILLNLKDCTKLGDLPLELYMLKSLETLIVSGCVKLERL 638

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS---------- 118
              +  M+ L+ L  + T+I ++P    +   LE L L+ CK L ++  +          
Sbjct: 639 DNALRDMKSLTTLKANYTAITQIPY---MSNQLEELSLDGCKELWKVRDNTHSDESPQAT 695

Query: 119 ------INGLKSLKTLNLSGCCKL--ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
                 +N +  LKTL L G C L  E VP  LG +  LEELD+ G   R        + 
Sbjct: 696 LSLLFPLNVISCLKTLRL-GSCNLSDELVPKNLGSLSCLEELDLQGNNFRNLQMDFAGLS 754

Query: 171 NLRSLYFSGCNEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
           +L+ L    C+E  +  S    LP  L     S+C +    P L+    L  L L++C
Sbjct: 755 SLQILKVDSCSELQSMFS----LPKRLRSFYASNCIMLERTPDLSECSVLQSLHLTNC 808



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 14/119 (11%)

Query: 693 NLERL------PRTISALKYLS---TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
           NL+RL      P+++  LKYL    ++ L+    F   P +    ++LL I+ + + +R 
Sbjct: 535 NLKRLWGDGKQPQSLKELKYLDLSHSIQLTDTPDFSNLPNL----EKLLLINCK-SLVRV 589

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             +   L    IL NLKDC  L  LP  +  L+SL  +  SGC KL+ +   L  ++SL
Sbjct: 590 HKSIGTLHEKLILLNLKDCTKLGDLPLELYMLKSLETLIVSGCVKLERLDNALRDMKSL 648


>gi|224109502|ref|XP_002333244.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835789|gb|EEE74224.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1060

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 145/295 (49%), Gaps = 58/295 (19%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           +S + +D  S+TEVPSS++ L  LE + L  C NL S P+  S  K LR LE++ C  + 
Sbjct: 675 VSLILVDCPSLTEVPSSLQYLDKLEKIDLYRCYNLRSFPMLYS--KVLRYLEINRCLDVT 732

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P I  +ME    L L+ TSI EVP S+                             L+
Sbjct: 733 TCPTISQNME---LLILEQTSIKEVPQSVA--------------------------SKLE 763

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
            L+LSGC K+   P+ L   E +E+LD+SGTAI+   SSI  + +L SL  +GC++  + 
Sbjct: 764 LLDLSGCSKMTKFPENL---EDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLES- 819

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                        + + P+           SL  L+LS  G+ E  + S   ++ SL  L
Sbjct: 820 -----------FSEITVPMK----------SLQHLNLSKSGIKEIPLIS-FKHMISLTFL 857

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           YL+      LP SI  ++ L+ L L     +++LP++PP+L+ +  + C+SL T+
Sbjct: 858 YLDGTPIKELPLSIKDMVCLQHLSLTGTP-IKALPELPPSLRKITTHDCASLETV 911



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 78/159 (49%), Gaps = 22/159 (13%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +++D+ DL L GT+I EVPSSI+ LT L  L + GC  L S       +K L+ L LS  
Sbjct: 779 NLEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVPMKSLQHLNLSK- 837

Query: 63  SKLKKFPQI-VASMEDLSKLYLDGTSIAEVPSSI--------------------ELLPGL 101
           S +K+ P I    M  L+ LYLDGT I E+P SI                    EL P L
Sbjct: 838 SGIKEIPLISFKHMISLTFLYLDGTPIKELPLSIKDMVCLQHLSLTGTPIKALPELPPSL 897

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
             +  ++C +L  + S IN       L+ + C KL+  P
Sbjct: 898 RKITTHDCASLETVTSIINISSLWHGLDFTNCFKLDQKP 936



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 20/158 (12%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS++ +  +   DI  +   GT I+E+  +I+ L  L  L +NGC  LE        +K 
Sbjct: 770 CSKMTKFPENLEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLESFSEITVPMKS 829

Query: 707 LSTLNLSGLSKFREFPEITSSR-DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
           L  LNLS  S  +E P I+      L  ++L+GT I+ LP SI           KD   L
Sbjct: 830 LQHLNLSK-SGIKEIPLISFKHMISLTFLYLDGTPIKELPLSI-----------KDMVCL 877

Query: 766 KSLPSTINGLRSLRMMYPS-------GCSKLKNVTETL 796
           + L  T   +++L  + PS        C+ L+ VT  +
Sbjct: 878 QHLSLTGTPIKALPELPPSLRKITTHDCASLETVTSII 915



 Score = 46.2 bits (108), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 45/196 (22%)

Query: 649 RLWEEADEFPDIVQV-LSDG---TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           +LW    +  ++ ++ LSD    T++ +LS+A      LV L L  C +L  +P ++  L
Sbjct: 640 KLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAK----NLVSLILVDCPSLTEVPSSLQYL 695

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIH-------------------LEGTAIRGLP 745
             L  ++L      R FP + S   + LEI+                   LE T+I+ +P
Sbjct: 696 DKLEKIDLYRCYNLRSFPMLYSKVLRYLEINRCLDVTTCPTISQNMELLILEQTSIKEVP 755

Query: 746 ASI----ELL--SG-----NILSNLKDCKNL-------KSLPSTINGLRSLRMMYPSGCS 787
            S+    ELL  SG         NL+D ++L       K +PS+I  L SL  +  +GCS
Sbjct: 756 QSVASKLELLDLSGCSKMTKFPENLEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCS 815

Query: 788 KLKNVTETLGKVESLE 803
           KL++ +E    ++SL+
Sbjct: 816 KLESFSEITVPMKSLQ 831



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 53/89 (59%), Gaps = 5/89 (5%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           +++ +P+++++   L  L+LSG SK  +FPE   + + + ++ L GTAI+ +P+SI+ L+
Sbjct: 750 SIKEVPQSVAS--KLELLDLSGCSKMTKFPE---NLEDIEDLDLSGTAIKEVPSSIQFLT 804

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMM 781
                ++  C  L+S       ++SL+ +
Sbjct: 805 SLCSLDMNGCSKLESFSEITVPMKSLQHL 833


>gi|74231152|gb|ABA00702.1| disease resistance protein [Phaseolus vulgaris]
          Length = 753

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/249 (38%), Positives = 129/249 (51%), Gaps = 16/249 (6%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           VPS+ + L  L  L L  C +L+  P  +S +K L+ L L GCSKL+  PQI  ++EDL 
Sbjct: 513 VPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSKLENLPQIQDTLEDLV 572

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            L LDGT+I  +PSS+  L GL+ L L  C NL  +PSSI  L  L  L+L+ C  L+  
Sbjct: 573 VLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLCKLDLTHCSSLQTF 632

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSI------FLMKNLRSLYFSGCNEPPASASWHLHL 193
           P T+  ++ L  LD+ G +  R    I      F   N   L  +   E P+S +  ++L
Sbjct: 633 PSTIFNLK-LRNLDLCGCSSLRTFPEITEPAPTFDHIN---LICTAVKELPSSFANLVNL 688

Query: 194 PFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRN 251
               L K  C     LP S+  +  L+KLD S C  L E  IP DI  L SL EL L  +
Sbjct: 689 RSLELRK--CTDLESLPNSIVNLKLLSKLDCSGCARLTE--IPRDIGRLTSLMELSLCDS 744

Query: 252 NFVTLPASI 260
             V LP SI
Sbjct: 745 GIVNLPESI 753



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 23/187 (12%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSL---------KC 53
           +++DL  L LDGT+I  +PSS+  L GL+ L+L  C NL  +P +I SL          C
Sbjct: 567 TLEDLVVLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLCKLDLTHC 626

Query: 54  --------------LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
                         LR L+L GCS L+ FP+I         + L  T++ E+PSS   L 
Sbjct: 627 SSLQTFPSTIFNLKLRNLDLCGCSSLRTFPEITEPAPTFDHINLICTAVKELPSSFANLV 686

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            L  L L +C +L  LP+SI  LK L  L+ SGC +L  +P  +G++ SL EL +  + I
Sbjct: 687 NLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGRLTSLMELSLCDSGI 746

Query: 160 RRPTSSI 166
                SI
Sbjct: 747 VNLPESI 753



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 10/183 (5%)

Query: 617 MISVDSGCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL 673
           +ISV  G +  +   ++ G++ VR++ PQ PG  SRL+  A+E   I +VL     +   
Sbjct: 461 LISVIDGRIVMHDLIQEMGKEIVRKECPQHPGKRSRLFN-AEE---ICEVLRKNEGVPS- 515

Query: 674 SLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE 733
               + L  L  L L+ C +L   P  +S +K+L  L+L G SK    P+I  + + L+ 
Sbjct: 516 --NFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSKLENLPQIQDTLEDLVV 573

Query: 734 IHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           + L+GTAI+ LP+S+  L G    +L  C NL+ +PS+I  L  L  +  + CS L+   
Sbjct: 574 LILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLCKLDLTHCSSLQTFP 633

Query: 794 ETL 796
            T+
Sbjct: 634 STI 636



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 26/182 (14%)

Query: 647 CSRLW---EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           CS+L    +  D   D+V ++ DGT I+ L  ++  L GL +L+L  C NLE +P +I +
Sbjct: 555 CSKLENLPQIQDTLEDLVVLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGS 614

Query: 704 LKYLSTLNLS-----------------------GLSKFREFPEITSSRDQLLEIHLEGTA 740
           L  L  L+L+                       G S  R FPEIT        I+L  TA
Sbjct: 615 LTRLCKLDLTHCSSLQTFPSTIFNLKLRNLDLCGCSSLRTFPEITEPAPTFDHINLICTA 674

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           ++ LP+S   L       L+ C +L+SLP++I  L+ L  +  SGC++L  +   +G++ 
Sbjct: 675 VKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGRLT 734

Query: 801 SL 802
           SL
Sbjct: 735 SL 736



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 93/215 (43%), Gaps = 8/215 (3%)

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLE 150
           VPS+ + L  L  L L+ C +L   P  ++ +K LK L+L GC KLEN+P     +E L 
Sbjct: 513 VPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFLKQLSLRGCSKLENLPQIQDTLEDLV 572

Query: 151 ELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVA 206
            L + GTAI+   SS+  +  L+ L    C      P +  S       +L   + C   
Sbjct: 573 VLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEIIPSSIGSLTRLCKLDL---THCSSL 629

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
              PS      L  LDL  C       P   +   +   + L       LP+S + L+NL
Sbjct: 630 QTFPSTIFNLKLRNLDLCGCS-SLRTFPEITEPAPTFDHINLICTAVKELPSSFANLVNL 688

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
             LEL  C  L+SLP    NL+ +    CS    L
Sbjct: 689 RSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARL 723



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 41/81 (50%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++EL  +   L  L  L L  C +LE LP +I  LK LS L+ SG ++  E P     
Sbjct: 673 TAVKELPSSFANLVNLRSLELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGR 732

Query: 728 RDQLLEIHLEGTAIRGLPASI 748
              L+E+ L  + I  LP SI
Sbjct: 733 LTSLMELSLCDSGIVNLPESI 753


>gi|224122448|ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 937

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 166/349 (47%), Gaps = 45/349 (12%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L  L+ L+LS      K P   + +  L  L L+    +A++  SI  L  L  L L  C
Sbjct: 630 LNNLKVLDLSHSMFFVKTPNF-SGLPSLETLILENCKRLADIHQSIGELKKLVFLNLKGC 688

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            +L  LP S+    +L+TLN +GC  LE  P+ LG ++ L E+  + T +    SSI  +
Sbjct: 689 SSLKNLPESLPS--TLETLNTTGCISLEKFPENLGNMQGLIEVQANETEVHHLPSSIGNL 746

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
           K L+ L+     +P         LP                S +G+ SLT L +S+  L 
Sbjct: 747 KKLKKLFIVLKQQP--------FLPL---------------SFSGLSSLTTLHVSNRHLS 783

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
            +    ++ +L SL++L L  N+F  LPA I  L  LE+L+L  C+ L  + +IP +L+ 
Sbjct: 784 NSNTSINLGSLSSLQDLKLASNDFSELPAGIGHLPKLEKLDLSACRNLLFISEIPSSLRT 843

Query: 290 VRANGCSSLVTLFGALKLCRSKYTII--NCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
           + A  C SL  + G L+   +K  I   NC         N L+ +  +E L LQ +S  G
Sbjct: 844 LVALDCISLEKIQG-LESVENKPVIRMENC---------NNLS-NNFKEIL-LQVLSK-G 890

Query: 348 HKLSIVFPGSQIPKWFM-YQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
               IV PGS +P WF+ YQ + SS T   P+   +V  + G  +  V+
Sbjct: 891 KLPDIVLPGSDVPHWFIQYQRDRSSSTFRIPA--ISVGLIQGLIVWTVY 937



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 26/165 (15%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L +   + ++  +I  L  LV L L GC +L+ LP ++ +   L TLN +G     +FP
Sbjct: 660 ILENCKRLADIHQSIGELKKLVFLNLKGCSSLKNLPESLPS--TLETLNTTGCISLEKFP 717

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL-------KSLPSTINGL 775
           E   +   L+E+    T +  LP+SI         NLK  K L         LP + +GL
Sbjct: 718 ENLGNMQGLIEVQANETEVHHLPSSI--------GNLKKLKKLFIVLKQQPFLPLSFSGL 769

Query: 776 RSLRMMYPSGCS-KLKNVTETLGKVESLE-VRLSSWNRPKMQNDF 818
            SL  ++ S       N +  LG + SL+ ++L+S       NDF
Sbjct: 770 SSLTTLHVSNRHLSNSNTSINLGSLSSLQDLKLAS-------NDF 807


>gi|357499629|ref|XP_003620103.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
 gi|355495118|gb|AES76321.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
          Length = 1075

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 192/453 (42%), Gaps = 68/453 (15%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           L+  S+ ++PS  E L       L  CK   S P +      L+ L L  C +L++    
Sbjct: 597 LEWHSLRDIPS--EFLPK----NLSICKLRKSCPTSFKMFMVLKVLHLDECKRLREISD- 649

Query: 72  VASMEDLSKL-YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
           V+ +++L +  +     +  +  SI  L  L++L    C+ L   P     L SL+ L L
Sbjct: 650 VSGLQNLEEFSFQRCKKLRTIHDSIGFLNKLKILNAEGCRKLKSFPPI--QLTSLELLRL 707

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASA 187
           S C +L N P+ LGK+E+LE + +  T+I+   +S   +  LR+L   G       P+S 
Sbjct: 708 SYCYRLRNFPEILGKMENLESIFLKETSIKELPNSFQNLSGLRNLLLDGFRMFLRLPSSI 767

Query: 188 ------SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                 SW L     + G+   P     PS     ++  L L +C L   ++P       
Sbjct: 768 LVMPKLSWVL-----VQGRHLLPKQCDKPSSMVSSNVKSLVLIECNLTGESLPIIFKWFA 822

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           ++  L L+++N   LP  I  L +LE L L+ CK LQ +  IPPNL+F+ A  C SL + 
Sbjct: 823 NVTNLNLSKSNITILPECIKELRSLERLYLDCCKLLQEIRAIPPNLKFLSAINCESLSS- 881

Query: 302 FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS-QIP 360
                 CR                      SML +  EL  V D   +L    PG+ +IP
Sbjct: 882 -----SCR----------------------SMLLDQ-ELHEVGDTMFRL----PGTLRIP 909

Query: 361 KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS--TGTYLFHSYPAHELECS 418
           +WF +Q      +  +P   +  NK+   ++ C      H   T  + F     +  EC 
Sbjct: 910 RWFEHQ------STRQPISFWFHNKLPSISLFCTIGCKYHPNVTSIFSFFKITINGYECF 963

Query: 419 MDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHG 451
            +G     YI       ++V   L LL L R G
Sbjct: 964 REGPTNFPYIKIEANHTYLVG--LKLLDLDRLG 994



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 63/227 (27%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLT---- 687
           G++ VR++SP+EPG  SRL        DI QVL + +   ++ + I L F L Q      
Sbjct: 509 GKEIVRQESPKEPGKRSRL----SFHEDIFQVLEENSGTSQIEI-IRLDFPLPQAIVEWK 563

Query: 688 ---LNGCKNL----------------------------------ERLPRTISALK----- 705
              L   KNL                                  E LP+ +S  K     
Sbjct: 564 GDELKKMKNLKTLIVKTSFFPKPHVHLPDNLRVLEWHSLRDIPSEFLPKNLSICKLRKSC 623

Query: 706 --------YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNIL 756
                    L  L+L    + RE  +++  ++ L E   +    +R +  SI  L+   +
Sbjct: 624 PTSFKMFMVLKVLHLDECKRLREISDVSGLQN-LEEFSFQRCKKLRTIHDSIGFLNKLKI 682

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            N + C+ LKS P     L SL ++  S C +L+N  E LGK+E+LE
Sbjct: 683 LNAEGCRKLKSFPPI--QLTSLELLRLSYCYRLRNFPEILGKMENLE 727



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 37/183 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M++L  ++L  TSI E+P+S + L+GL  L L G +    LP +I  +  L  + + 
Sbjct: 720 LGKMENLESIFLKETSIKELPNSFQNLSGLRNLLLDGFRMFLRLPSSILVMPKLSWVLVQ 779

Query: 61  GCSKLKK---------------------------FPQIVASMEDLSKLYLDGTSIAEVPS 93
           G   L K                            P I     +++ L L  ++I  +P 
Sbjct: 780 GRHLLPKQCDKPSSMVSSNVKSLVLIECNLTGESLPIIFKWFANVTNLNLSKSNITILPE 839

Query: 94  SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN---LSGCCK-------LENVPDTL 143
            I+ L  LE LYL+ CK L  + +    LK L  +N   LS  C+       L  V DT+
Sbjct: 840 CIKELRSLERLYLDCCKLLQEIRAIPPNLKFLSAINCESLSSSCRSMLLDQELHEVGDTM 899

Query: 144 GKV 146
            ++
Sbjct: 900 FRL 902



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 13/128 (10%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R +  +I  L  L  L   GC+ L+  P     L  L  L LS   + R FPEI    +
Sbjct: 667 LRTIHDSIGFLNKLKILNAEGCRKLKSFPPI--QLTSLELLRLSYCYRLRNFPEILGKME 724

Query: 730 QLLEIHLEGTAIRGLPASIELLSG--NILSNLKDCKNLKSLPSTINGLRSL-------RM 780
            L  I L+ T+I+ LP S + LSG  N+L  L   +    LPS+I  +  L       R 
Sbjct: 725 NLESIFLKETSIKELPNSFQNLSGLRNLL--LDGFRMFLRLPSSILVMPKLSWVLVQGRH 782

Query: 781 MYPSGCSK 788
           + P  C K
Sbjct: 783 LLPKQCDK 790


>gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 972

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 155/296 (52%), Gaps = 14/296 (4%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +L + G+ + ++   I+ L  L+ + L   KNL  LP  +SS   L  L L+GCS L 
Sbjct: 653 LVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSSLV 711

Query: 67  KFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           + P  + +   L KL L G +S+ E+PSSI     L+ +  + C+NLV LPSSI    +L
Sbjct: 712 ELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNL 771

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELD-VSGTAIRRPTSSIFLMKNLRSLYFSGCN--- 181
           K L+LS C  L+ +P ++G   +L++L  +  ++++   SSI    NL+ L+ + C+   
Sbjct: 772 KELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLI 831

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE--AAIPSDIDN 239
           + P+S    ++L   +L  + C   + LPS  G    T L + + G       +PS I N
Sbjct: 832 KLPSSIGNAINLEKLIL--AGCESLVELPSFIG--KATNLKILNLGYLSCLVELPSFIGN 887

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
           LH L EL L        LP +I+ L  L EL+L DC  L++ P I  N++ +   G
Sbjct: 888 LHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKTFPVISTNIKRLHLRG 942



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 31/260 (11%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+ E+PSSI     L+ +    C+NL  LP +I +   L+ L+LS CS LK+ P  + +
Sbjct: 732 SSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSIGN 791

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             +L KL+L   +S+ E+PSSI     L+ L+L  C +L++LPSSI    +L+ L L+GC
Sbjct: 792 CTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGC 851

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             L  +P  +GK  +L+ L++                     Y S   E P+    +LH 
Sbjct: 852 ESLVELPSFIGKATNLKILNLG--------------------YLSCLVELPSFIG-NLH- 889

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA--AIPSDIDNLHSLKELYLNRN 251
             + L    C    +LP+   +  L +LDL+DC L +    I ++I  LH      L   
Sbjct: 890 KLSELRLRGCKKLQVLPTNINLEFLNELDLTDCILLKTFPVISTNIKRLH------LRGT 943

Query: 252 NFVTLPASISGLLNLEELEL 271
               +P+S+     LE+L++
Sbjct: 944 QIEEVPSSLRSWPRLEDLQM 963



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 120/235 (51%), Gaps = 13/235 (5%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E L +L + G+ + ++   I+ L  L+ + L   KNL  LP  ++   +L+ LNL+GC  
Sbjct: 651 EFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSS 709

Query: 136 LENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHL 191
           L  +P ++G    L +L++SG +++    SSI    NL+++ FS C    E P+S     
Sbjct: 710 LVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNAT 769

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCS-LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN- 249
           +L    L  S C     LPS  G C+ L KL L  C      +PS I N  +LKEL+L  
Sbjct: 770 NL--KELDLSCCSSLKELPSSIGNCTNLKKLHLICCS-SLKELPSSIGNCTNLKELHLTC 826

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGCSSLVTL 301
            ++ + LP+SI   +NLE+L L  C+ L  LP       NL+ +     S LV L
Sbjct: 827 CSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVEL 881



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 4/96 (4%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + E+PS I  L  L  L L+GCK L  LP  I+ L+ L  L+L+ C  LK FP I  +++
Sbjct: 878 LVELPSFIGNLHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKTFPVISTNIK 936

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL 112
              +L+L GT I EVPSS+   P LE L +   +NL
Sbjct: 937 ---RLHLRGTQIEEVPSSLRSWPRLEDLQMLYSENL 969



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 10/142 (7%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+ + +L   I+ L  L ++ L   KNL+ LP  +S+   L  LNL+G S   E P    
Sbjct: 660 GSKLEKLWEEIQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIG 718

Query: 727 SRDQLLEIHLEG-TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMM 781
           +  +LL++ L G +++  LP+SI    GN ++    +   C+NL  LPS+I    +L+ +
Sbjct: 719 NATKLLKLELSGCSSLLELPSSI----GNAINLQTIDFSHCENLVELPSSIGNATNLKEL 774

Query: 782 YPSGCSKLKNVTETLGKVESLE 803
             S CS LK +  ++G   +L+
Sbjct: 775 DLSCCSSLKELPSSIGNCTNLK 796



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 26/165 (15%)

Query: 656 EFPDIVQVLSDGTDIRELSL-----AIELLFG------LVQLTLNGCKNLERLPRTISAL 704
           E PD    LS  T++  L+L      +EL F       L++L L+GC +L  LP +I   
Sbjct: 689 ELPD----LSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNA 744

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-- 761
             L T++ S      E P    +   L E+ L   ++++ LP+SI    GN  +NLK   
Sbjct: 745 INLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSI----GNC-TNLKKLH 799

Query: 762 ---CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              C +LK LPS+I    +L+ ++ + CS L  +  ++G   +LE
Sbjct: 800 LICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLE 844



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  +I     L  +  + C+NL  LP +I     L  L+LS  S  +E P 
Sbjct: 728 LSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPS 787

Query: 724 ITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRS 777
              +   L ++HL   ++++ LP+SI    GN  +NLK+     C +L  LPS+I    +
Sbjct: 788 SIGNCTNLKKLHLICCSSLKELPSSI----GNC-TNLKELHLTCCSSLIKLPSSIGNAIN 842

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLEV 804
           L  +  +GC  L  +   +GK  +L++
Sbjct: 843 LEKLILAGCESLVELPSFIGKATNLKI 869



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 11/144 (7%)

Query: 638 RQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
           ++ P   GNC+ L E           L+  + + +L  +I     L +L L GC++L  L
Sbjct: 807 KELPSSIGNCTNLKELH---------LTCCSSLIKLPSSIGNAINLEKLILAGCESLVEL 857

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNIL 756
           P  I     L  LNL  LS   E P    +  +L E+ L G   ++ LP +I L   N L
Sbjct: 858 PSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQVLPTNINLEFLNEL 917

Query: 757 SNLKDCKNLKSLPSTINGLRSLRM 780
            +L DC  LK+ P     ++ L +
Sbjct: 918 -DLTDCILLKTFPVISTNIKRLHL 940



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 4/77 (5%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           EL   I  L  L +L L GCK L+ LP  I+ L++L+ L+L+     + FP I+++  +L
Sbjct: 880 ELPSFIGNLHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKTFPVISTNIKRL 938

Query: 732 LEIHLEGTAIRGLPASI 748
              HL GT I  +P+S+
Sbjct: 939 ---HLRGTQIEEVPSSL 952


>gi|15242300|ref|NP_199319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758979|dbj|BAB09489.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007813|gb|AED95196.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1165

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 14/188 (7%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  LYLDGTSI+++P ++  L  L LL +K CK L ++P  +S LK L+ L LSGCSK
Sbjct: 726 ENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSK 785

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LK+FP+I  S   L  L LDGTSI  +P     LP ++ L L+   +L+ LP+ IN +  
Sbjct: 786 LKEFPEINKS--SLKILLLDGTSIKTMPQ----LPSVQYLCLSRNDHLIYLPAGINQVSQ 839

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA----IRRPTSSIF-LMKNLRSLYFSG 179
           L  L+L  C KL  VP+      +L+ LD  G +    + +P + I   ++N  +  F+ 
Sbjct: 840 LTRLDLKYCTKLTYVPEL---PPTLQYLDAHGCSSLKNVAKPLARIMSTVQNHYTFNFTN 896

Query: 180 CNEPPASA 187
           C     +A
Sbjct: 897 CGNLEQAA 904



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 163/385 (42%), Gaps = 104/385 (27%)

Query: 30  LELLTLKGCKNLSSL-PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSI 88
           L+ L L+GC +L SL  V ++SLK   TL LS CS  K+FP I    E+L  LYLDGTSI
Sbjct: 685 LQRLNLEGCTSLESLRDVNLTSLK---TLTLSNCSNFKEFPLIP---ENLKALYLDGTSI 738

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
           ++                        LP ++  LK L  LN+  C  LE +P  + +   
Sbjct: 739 SQ------------------------LPDNVGNLKRLVLLNMKDCKVLETIPTCVSE--- 771

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
                               +K L+ L  SGC++            F  + KSS  + L+
Sbjct: 772 --------------------LKTLQKLVLSGCSKLKE---------FPEINKSSLKILLL 802

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN-FVTLPASISGLLNLE 267
                             G     +P     L S++ L L+RN+  + LPA I+ +  L 
Sbjct: 803 -----------------DGTSIKTMP----QLPSVQYLCLSRNDHLIYLPAGINQVSQLT 841

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRS------KYTIINCIDSL 321
            L+L+ C +L  +P++PP LQ++ A+GCSSL  +   L    S       +   NC  +L
Sbjct: 842 RLDLKYCTKLTYVPELPPTLQYLDAHGCSSLKNVAKPLARIMSTVQNHYTFNFTNC-GNL 900

Query: 322 KLLRKNGLAISMLREYLELQAVSDPGHK--------LSIVFPGSQIPKWFMYQNEGSSIT 373
           +   K  +     R   + Q +SD             S  FPG ++P WF ++  GS + 
Sbjct: 901 EQAAKEEITSYAQR---KCQLLSDARKHYNEGSEALFSTCFPGCEVPSWFGHEAVGSLLQ 957

Query: 374 VTRPSYLYNVNKVVGFAICCVFQVP 398
                + ++  ++ G A+C V   P
Sbjct: 958 RKLLPHWHD-KRLSGIALCAVVSFP 981



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 103/222 (46%), Gaps = 39/222 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NCS       EFP I + L     DGT I +L   +  L  LV L +  CK LE +P  +
Sbjct: 714 NCSNF----KEFPLIPENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKVLETIPTCV 769

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG------------------ 743
           S LK L  L LSG SK +EFPEI  S  ++L   L+GT+I+                   
Sbjct: 770 SELKTLQKLVLSGCSKLKEFPEINKSSLKIL--LLDGTSIKTMPQLPSVQYLCLSRNDHL 827

Query: 744 --LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LPA I  +S     +LK C  L  +P       +L+ +   GCS LKNV + L ++ S
Sbjct: 828 IYLPAGINQVSQLTRLDLKYCTKLTYVPELPP---TLQYLDAHGCSSLKNVAKPLARIMS 884

Query: 802 LEVRLSSWNRPKMQNDFDCVEQSAVETVTKLA--KAELLRDS 841
                 ++N     N    +EQ+A E +T  A  K +LL D+
Sbjct: 885 TVQNHYTFNFTNCGN----LEQAAKEEITSYAQRKCQLLSDA 922



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 7/147 (4%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           RLW+   + P +  V L+  + +  LS  +     L +L L GC +LE L R ++ L  L
Sbjct: 651 RLWDGVKDTPVLKWVDLNHSSKLCSLS-GLSKAQNLQRLNLEGCTSLESL-RDVN-LTSL 707

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            TL LS  S F+EFP I    + L  ++L+GT+I  LP ++  L   +L N+KDCK L++
Sbjct: 708 KTLTLSNCSNFKEFPLIP---ENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKVLET 764

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +P+ ++ L++L+ +  SGCSKLK   E
Sbjct: 765 IPTCVSELKTLQKLVLSGCSKLKEFPE 791


>gi|357521387|ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
 gi|355525004|gb|AET05458.1| NBS-LRR resistance-like protein [Medicago truncatula]
          Length = 1177

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 190/427 (44%), Gaps = 75/427 (17%)

Query: 88   IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS---------------- 131
            I E+PSS++ L GLE L L  C+ L  +PSSI  L  L  L+L+                
Sbjct: 710  IMELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKLSKLDLTYCESLETFPSSIFKLK 769

Query: 132  -------GCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNEP 183
                   GC  L+N PD L   E+   ++++ TAI+  P+S  + +  L++L    C++ 
Sbjct: 770  LKKLDLHGCSMLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQTLCLKLCSDL 829

Query: 184  PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
             +  +  ++L  N L +  C         +G CSLT+            IP++I +L SL
Sbjct: 830  VSLPNSVVNL--NYLSEIDC---------SGCCSLTE------------IPNNIGSLSSL 866

Query: 244  KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
            ++L L  +N V LP SI+ L NL+ L+L  CKRL+ +PQ+P +L  + A  C S+  +  
Sbjct: 867  RKLSLQESNVVNLPESIANLSNLKSLDLSFCKRLECIPQLPSSLNQLLAYDCPSVGRMMP 926

Query: 304  ALKLCRSKYT-----IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
              +L  S  +     I +  +S +L   +    S +     L+        L   FPGS 
Sbjct: 927  NSRLELSAISDNDIFIFHFTNSQEL---DETVCSNIGAEAFLRITRGAYRSLFFCFPGSA 983

Query: 359  IPKWFMYQNEGSSITVTRPSY-LYNVNKVVGFAICCVF----QVPKHSTGTYLFHSYPAH 413
            +P  F Y+  GS +T+ + S    N  ++ GFA+C V      V  +      F S   H
Sbjct: 984  VPGRFPYRCTGSLVTMEKDSVDCPNNYRLFGFALCVVLGRVDMVIDNIICKLTFES-DGH 1042

Query: 414  ELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTW 473
                 +   G  +Y Y +G+    + DH ++   P H              FRSI +  +
Sbjct: 1043 THSLPISNFGNNYYCYGKGRDMLFIQDHTFIWTYPLH--------------FRSIDNRVF 1088

Query: 474  KVKRCGF 480
              ++  F
Sbjct: 1089 DAQKFTF 1095



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 108/220 (49%), Gaps = 27/220 (12%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS---------------- 60
           I E+PSS++ L GLE L+L  C+ L ++P +I SL  L  L+L+                
Sbjct: 710 IMELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKLSKLDLTYCESLETFPSSIFKLK 769

Query: 61  -------GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL-LPGLELLYLNECKNL 112
                  GCS LK FP I+   E    + L  T+I E+PSS+E  L  L+ L L  C +L
Sbjct: 770 LKKLDLHGCSMLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQTLCLKLCSDL 829

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
           V LP+S+  L  L  ++ SGCC L  +P+ +G + SL +L +  + +     SI  + NL
Sbjct: 830 VSLPNSVVNLNYLSEIDCSGCCSLTEIPNNIGSLSSLRKLSLQESNVVNLPESIANLSNL 889

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCP-VALMLPS 211
           +SL  S C          L    N L    CP V  M+P+
Sbjct: 890 KSLDLSFCKRLECIP--QLPSSLNQLLAYDCPSVGRMMPN 927



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 26/153 (16%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLS---------------- 713
           I EL  +++ L GL +L+L  C+ LE +P +I +L  LS L+L+                
Sbjct: 710 IMELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKLSKLDLTYCESLETFPSSIFKLK 769

Query: 714 -------GLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE--LLSGNILSNLKDCKN 764
                  G S  + FP+I    +  + I+L  TAI+ LP+S+E  L++   L  LK C +
Sbjct: 770 LKKLDLHGCSMLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQTLC-LKLCSD 828

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           L SLP+++  L  L  +  SGC  L  +   +G
Sbjct: 829 LVSLPNSVVNLNYLSEIDCSGCCSLTEIPNNIG 861



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 74/156 (47%), Gaps = 25/156 (16%)

Query: 12  LDGTSITEVPSSIEL-LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQ 70
           L  T+I E+PSS+E  L  L+ L LK C +L SLP ++ +L  L  ++ SGC        
Sbjct: 799 LTKTAIKELPSSLEYNLVALQTLCLKLCSDLVSLPNSVVNLNYLSEIDCSGC-------- 850

Query: 71  IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
                           S+ E+P++I  L  L  L L E  N+V LP SI  L +LK+L+L
Sbjct: 851 ---------------CSLTEIPNNIGSLSSLRKLSLQE-SNVVNLPESIANLSNLKSLDL 894

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
           S C +LE +P     +  L   D        P S +
Sbjct: 895 SFCKRLECIPQLPSSLNQLLAYDCPSVGRMMPNSRL 930



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 11/130 (8%)

Query: 657 FPDI-------VQVLSDGTDIRELSLAIEL-LFGLVQLTLNGCKNLERLPRTISALKYLS 708
           FPDI       V +    T I+EL  ++E  L  L  L L  C +L  LP ++  L YLS
Sbjct: 784 FPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQTLCLKLCSDLVSLPNSVVNLNYLS 843

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK-- 766
            ++ SG     E P    S   L ++ L+ + +  LP SI  LS     +L  CK L+  
Sbjct: 844 EIDCSGCCSLTEIPNNIGSLSSLRKLSLQESNVVNLPESIANLSNLKSLDLSFCKRLECI 903

Query: 767 -SLPSTINGL 775
             LPS++N L
Sbjct: 904 PQLPSSLNQL 913


>gi|255555353|ref|XP_002518713.1| Disease resistance protein RPS2, putative [Ricinus communis]
 gi|223542094|gb|EEF43638.1| Disease resistance protein RPS2, putative [Ricinus communis]
          Length = 1010

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 210/445 (47%), Gaps = 73/445 (16%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ ++LS    L   P +  ++ ++ K+YL G +S+ EV SS++ L  LE L L +C  L
Sbjct: 604 LKEIDLSHSKYLIGIPDLSKAI-NIEKIYLTGCSSLEEVHSSLQYLNKLEFLDLGDCNKL 662

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP  I+    LK L L G  +++   +  G    LE L++   AI+   S I  + N 
Sbjct: 663 RSLPRRIDS-NVLKVLKL-GSPRVKRCREFKG--NQLETLNLYCPAIKNVASIISSILNS 718

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEA 231
             L               +HL        +C    +LPS    + SL  LDL+ C + + 
Sbjct: 719 SRL---------------VHLSV-----YNCRKLSILPSSFYKMKSLRSLDLAYCAIKQ- 757

Query: 232 AIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
            IPS I++L  L  L L    ++ +LP+SI GL  L  + L  C+ L+SLP++P +L+ +
Sbjct: 758 -IPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCESLRSLPELPLSLRML 816

Query: 291 RANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL 350
            AN C SL     +  +  +++ ++   + L+ LR +  A+ M  ++L    V  PG + 
Sbjct: 817 FANNCKSL----ESESITSNRHLLVTFANCLR-LRFDQTALQMT-DFLVPTNV--PG-RF 867

Query: 351 SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSY 410
             ++PGS++P WF  Q+ GSS+T+  P  +Y +N +   A C VF+  K         SY
Sbjct: 868 YWLYPGSEVPGWFSNQSMGSSVTMQSPLNMYMLNAI---AFCIVFEFKK--------PSY 916

Query: 411 PAHELECSMD------GSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLS 464
              ++EC+ D      GSG+        K  HV+   +W      +     ++S  I  S
Sbjct: 917 CCFKVECAEDHAKATFGSGQIFSPSILAKTDHVL---IWF-----NCTRELYKSTRIASS 968

Query: 465 F---------RSISDPTWKVKRCGF 480
           F         +  S    KVKRCGF
Sbjct: 969 FYFYHSKDADKEESLKHCKVKRCGF 993



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 77/183 (42%), Gaps = 47/183 (25%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISS--LKCL-------- 54
           ++  +YL G +S+ EV SS++ L  LE L L  C  L SLP  I S  LK L        
Sbjct: 626 NIEKIYLTGCSSLEEVHSSLQYLNKLEFLDLGDCNKLRSLPRRIDSNVLKVLKLGSPRVK 685

Query: 55  RTLELSG------------------------------------CSKLKKFPQIVASMEDL 78
           R  E  G                                    C KL   P     M+ L
Sbjct: 686 RCREFKGNQLETLNLYCPAIKNVASIISSILNSSRLVHLSVYNCRKLSILPSSFYKMKSL 745

Query: 79  SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
             L L   +I ++PSSIE L  L  L L +CK L  LPSSI GL  L T+ L+ C  L +
Sbjct: 746 RSLDLAYCAIKQIPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCESLRS 805

Query: 139 VPD 141
           +P+
Sbjct: 806 LPE 808



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 24/112 (21%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L++  C+ L  LP +   +K L +L+L+                          AI+
Sbjct: 721 LVHLSVYNCRKLSILPSSFYKMKSLRSLDLAY------------------------CAIK 756

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            +P+SIE LS  I  NL DCK L+SLPS+I GL  L  MY + C  L+++ E
Sbjct: 757 QIPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCESLRSLPE 808



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 42/75 (56%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           MK L  L L   +I ++PSSIE L+ L  L L  CK L SLP +I  L  L T+ L+ C 
Sbjct: 742 MKSLRSLDLAYCAIKQIPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCE 801

Query: 64  KLKKFPQIVASMEDL 78
            L+  P++  S+  L
Sbjct: 802 SLRSLPELPLSLRML 816



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEI 724
           I+++  +IE L  L+ L L  CK LE LP +I  L  L+T+ L+     R  PE+
Sbjct: 755 IKQIPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCESLRSLPEL 809


>gi|297791253|ref|XP_002863511.1| hypothetical protein ARALYDRAFT_916989 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309346|gb|EFH39770.1| hypothetical protein ARALYDRAFT_916989 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 464

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 168/384 (43%), Gaps = 99/384 (25%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           +  L LL L+GC  L SLP    SL  L+ L LSGCSK +KF Q+++             
Sbjct: 1   MKNLILLNLRGCTGLVSLPKI--SLCSLKILILSGCSKFQKF-QVISE------------ 45

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD--TLG 144
                         LE LYLN    + RLP S+  L+ L  L+L  C  LE + D   L 
Sbjct: 46  -------------NLETLYLNGTA-IDRLPPSVGNLQRLILLDLKDCTNLETLSDCTNLW 91

Query: 145 KVESLEELDVSGTAIRR--PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS 202
            + SL+EL +SG +  +  P +    ++NLR+L   G                       
Sbjct: 92  NMRSLQELKLSGCSKLKSFPKN----IENLRNLLLEG----------------------- 124

Query: 203 CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASIS 261
                     T +                 +P +I+ +  L+ L L+R++ + TL  +I+
Sbjct: 125 ----------TAI---------------TEMPQNINGMSLLRRLCLSRSDEICTLQFNIN 159

Query: 262 GLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL------CRSKYTII 315
            L +L+ LEL  CK L SL  +PPNLQF+ A+GC+SL T+   L L        S +   
Sbjct: 160 ELYHLKWLELMYCKNLTSLLGLPPNLQFLYAHGCTSLKTVSSPLALLISTEQIHSTFIFT 219

Query: 316 NCIDSLKLLRKNGLAISMLR-----EYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGS 370
           NC   L+ + KN +  S+        Y +          +S  FPGS +P+WF +Q  GS
Sbjct: 220 NC-HELEQVSKNDIMSSIQNTRHPTSYDQYNRGFVVKSLISTCFPGSDVPQWFKHQAFGS 278

Query: 371 SITVTRPSYLYNVNKVVGFAICCV 394
            +    P + Y   +V G A+C V
Sbjct: 279 VLKQELPRHWYE-GRVNGLALCVV 301



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 105/185 (56%), Gaps = 13/185 (7%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP--VTISSLKCLRTLELSGC 62
           ++L  LYL+GT+I  +P S+  L  L LL LK C NL +L     + +++ L+ L+LSGC
Sbjct: 45  ENLETLYLNGTAIDRLPPSVGNLQRLILLDLKDCTNLETLSDCTNLWNMRSLQELKLSGC 104

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           SKLK FP+   ++E+L  L L+GT+I E+P +I  +  L  L L+    +  L  +IN L
Sbjct: 105 SKLKSFPK---NIENLRNLLLEGTAITEMPQNINGMSLLRRLCLSRSDEICTLQFNINEL 161

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLY----F 177
             LK L L  C   +N+   LG   +L+ L   G T+++  +S + L+ +   ++    F
Sbjct: 162 YHLKWLELMYC---KNLTSLLGLPPNLQFLYAHGCTSLKTVSSPLALLISTEQIHSTFIF 218

Query: 178 SGCNE 182
           + C+E
Sbjct: 219 TNCHE 223



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 7/122 (5%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L GC  L  LP+   +L  L  L LSG SKF++F  I+   + L  ++L GTAI 
Sbjct: 4   LILLNLRGCTGLVSLPKI--SLCSLKILILSGCSKFQKFQVIS---ENLETLYLNGTAID 58

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTIN--GLRSLRMMYPSGCSKLKNVTETLGKVE 800
            LP S+  L   IL +LKDC NL++L    N   +RSL+ +  SGCSKLK+  + +  + 
Sbjct: 59  RLPPSVGNLQRLILLDLKDCTNLETLSDCTNLWNMRSLQELKLSGCSKLKSFPKNIENLR 118

Query: 801 SL 802
           +L
Sbjct: 119 NL 120



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 75/165 (45%), Gaps = 34/165 (20%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLP--RTISALKYLSTLNLSGLSKFREFPE 723
           +GT I  L  ++  L  L+ L L  C NLE L     +  ++ L  L LSG SK + FP+
Sbjct: 53  NGTAIDRLPPSVGNLQRLILLDLKDCTNLETLSDCTNLWNMRSLQELKLSGCSKLKSFPK 112

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLS-------------------GNILSNLK---- 760
              +   LL   LEGTAI  +P +I  +S                    N L +LK    
Sbjct: 113 NIENLRNLL---LEGTAITEMPQNINGMSLLRRLCLSRSDEICTLQFNINELYHLKWLEL 169

Query: 761 -DCKNLKSLPSTINGL-RSLRMMYPSGCSKLKNVTETLGKVESLE 803
             CKNL SL     GL  +L+ +Y  GC+ LK V+  L  + S E
Sbjct: 170 MYCKNLTSLL----GLPPNLQFLYAHGCTSLKTVSSPLALLISTE 210



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 47/211 (22%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++++L +L L+GT+ITE+P +I  ++ L  L L     + +L   I+ L  L+ LEL  C
Sbjct: 113 NIENLRNLLLEGTAITEMPQNINGMSLLRRLCLSRSDEICTLQFNINELYHLKWLELMYC 172

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             L                    TS+  +P      P L+ LY + C +L  + S +  L
Sbjct: 173 KNL--------------------TSLLGLP------PNLQFLYAHGCTSLKTVSSPLALL 206

Query: 123 KSLK----TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS-----SIFLMKNLR 173
            S +    T   + C +LE V        S  ++  S    R PTS       F++K+L 
Sbjct: 207 ISTEQIHSTFIFTNCHELEQV--------SKNDIMSSIQNTRHPTSYDQYNRGFVVKSLI 258

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
           S  F G + P     W  H  F  + K   P
Sbjct: 259 STCFPGSDVP----QWFKHQAFGSVLKQELP 285


>gi|297825393|ref|XP_002880579.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297326418|gb|EFH56838.1| hypothetical protein ARALYDRAFT_900967 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1158

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 178/405 (43%), Gaps = 78/405 (19%)

Query: 7    LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            L  L L+G T++   P     +  L  L L+GC +LS LP  + +  CL+TL LSGC+  
Sbjct: 665  LERLNLEGCTNLELFPKDEGNMKSLAFLNLRGCTSLSFLP-EMENFDCLKTLILSGCTSF 723

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            + F       ++L  L+LDGT I +                        LP +I  L+ L
Sbjct: 724  EDFQ---VKSKNLEYLHLDGTEITD------------------------LPQTIVELQRL 756

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGCNEPP 184
              LNL  C  L+ +PD LGK+++LEEL +SG +  R    I   M+NL+ L   G     
Sbjct: 757  IVLNLKDCKMLDTLPDCLGKLKALEELILSGCSRLRSFPEIKDNMENLQILLLDGTK--- 813

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVC--SLTKLDLSDCGLGEAAIPSDIDNLHS 242
                                    LP +   C  S+ +++L          PS       
Sbjct: 814  ---------------------IRDLPKILLRCANSVDQMNLQRS-------PSMSGLSLL 845

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
             +         ++L +SIS L +L+ ++L+ C +LQS+  +PPNLQ + A+ C+SL T+ 
Sbjct: 846  RRLCLSRNEMIISLQSSISDLYHLKWIDLKYCTKLQSISMLPPNLQCLDAHDCTSLKTVA 905

Query: 303  G------ALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK------- 349
                   A +   S +   NC   L+   KN +      +   L    +  +K       
Sbjct: 906  SPLARPLATEQVPSSFIFTNC-QKLEHAAKNEITCYGHNKGRLLSKTLNRHNKGLCFEAL 964

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
            ++  FPGS++P WF +++ G+ +    P + ++ N  VG A+C +
Sbjct: 965  VATCFPGSEVPDWFGHKSSGAVLEPELPRH-WSENGFVGIALCAI 1008



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 32/208 (15%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K+L  L+LDGT IT++P +I  L  L +L LK CK L +LP  +  LK L  L LSGCS+
Sbjct: 731 KNLEYLHLDGTEITDLPQTIVELQRLIVLNLKDCKMLDTLPDCLGKLKALEELILSGCSR 790

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPS------------SIELLPGLE--------LL 104
           L+ FP+I  +ME+L  L LDGT I ++P             +++  P +          L
Sbjct: 791 LRSFPEIKDNMENLQILLLDGTKIRDLPKILLRCANSVDQMNLQRSPSMSGLSLLRRLCL 850

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS-----GTAI 159
             NE   ++ L SSI+ L  LK ++L  C KL+++      ++ L+  D +      + +
Sbjct: 851 SRNEM--IISLQSSISDLYHLKWIDLKYCTKLQSISMLPPNLQCLDAHDCTSLKTVASPL 908

Query: 160 RRPTS-----SIFLMKNLRSLYFSGCNE 182
            RP +     S F+  N + L  +  NE
Sbjct: 909 ARPLATEQVPSSFIFTNCQKLEHAAKNE 936



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 92/179 (51%), Gaps = 22/179 (12%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           R+W++  + P++  V LS  T + +LS A+     L +L L GC NLE  P+    +K L
Sbjct: 631 RVWDDVKDTPNLKWVDLSHSTKLIDLS-ALWKAESLERLNLEGCTNLELFPKDEGNMKSL 689

Query: 708 STLNLSGLSKFREFPEI--------------TSSRD------QLLEIHLEGTAIRGLPAS 747
           + LNL G +     PE+              TS  D       L  +HL+GT I  LP +
Sbjct: 690 AFLNLRGCTSLSFLPEMENFDCLKTLILSGCTSFEDFQVKSKNLEYLHLDGTEITDLPQT 749

Query: 748 IELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           I  L   I+ NLKDCK L +LP  +  L++L  +  SGCS+L++  E    +E+L++ L
Sbjct: 750 IVELQRLIVLNLKDCKMLDTLPDCLGKLKALEELILSGCSRLRSFPEIKDNMENLQILL 808



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 46/80 (57%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           DGT+I +L   I  L  L+ L L  CK L+ LP  +  LK L  L LSG S+ R FPEI 
Sbjct: 739 DGTEITDLPQTIVELQRLIVLNLKDCKMLDTLPDCLGKLKALEELILSGCSRLRSFPEIK 798

Query: 726 SSRDQLLEIHLEGTAIRGLP 745
            + + L  + L+GT IR LP
Sbjct: 799 DNMENLQILLLDGTKIRDLP 818



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 47/223 (21%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E+L  L L  + I  V   ++  P L+ + L+    L+ L S++   +SL+ LNL GC  
Sbjct: 617 ENLVDLRLPYSKIERVWDDVKDTPNLKWVDLSHSTKLIDL-SALWKAESLERLNLEGCTN 675

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFL--MKN---LRSLYFSGCN-----EPPA 185
           LE  P   G ++SL  L++ G      TS  FL  M+N   L++L  SGC      +  +
Sbjct: 676 LELFPKDEGNMKSLAFLNLRGC-----TSLSFLPEMENFDCLKTLILSGCTSFEDFQVKS 730

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
               +LHL           +  +  ++  +  L  L+L DC + +               
Sbjct: 731 KNLEYLHL-------DGTEITDLPQTIVELQRLIVLNLKDCKMLD--------------- 768

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
                    TLP  +  L  LEEL L  C RL+S P+I  N++
Sbjct: 769 ---------TLPDCLGKLKALEELILSGCSRLRSFPEIKDNME 802


>gi|30692215|ref|NP_850655.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644403|gb|AEE77924.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1240

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 148/293 (50%), Gaps = 15/293 (5%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D   + E+PSSIE LT L++L L+ C +L  LP +I++   L+ L L+ CS++ K P I 
Sbjct: 748  DSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNLQGLSLTNCSRVVKLPAI- 805

Query: 73   ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             ++ +L +L L   +S+ E+P SI     L  L +  C +LV+LPSSI  + +LK  +LS
Sbjct: 806  ENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKEFDLS 865

Query: 132  GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             C  L  +P ++G ++ L  L + G +      +   + +LR L  + C++  +      
Sbjct: 866  NCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNINLISLRILDLTDCSQLKSFPEIST 925

Query: 192  HL-PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA--AIPSDIDNLHSLKELYL 248
            H+    L G +   V L       + S ++L + +    E+    P  +D    + +L L
Sbjct: 926  HISELRLKGTAIKEVPL------SITSWSRLAVYEMSYFESLKEFPHALD---IITDLLL 976

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
               +   +P  +  +  L  L L +C  L SLPQ+P +L ++ A+ C SL  L
Sbjct: 977  VSEDIQEVPPWVKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERL 1029



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 20/209 (9%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L  L+ + L++ ++L  LPSSI  L SL+ L+L  C  L  +P ++    +L+ L ++  
Sbjct: 738 LRNLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSIN-ANNLQGLSLTNC 796

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCN---EPPASAS-----WHLHLPFNLLGKSSCPVALML 209
           +      +I  + NL  L    C+   E P S       W L +         C   + L
Sbjct: 797 SRVVKLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDI-------RGCSSLVKL 849

Query: 210 PSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLE 267
           PS  G + +L + DLS+C      +PS I NL  L  L +   +   TLP +I+ L++L 
Sbjct: 850 PSSIGDMTNLKEFDLSNCS-NLVELPSSIGNLQKLFMLRMRGCSKLETLPTNIN-LISLR 907

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            L+L DC +L+S P+I  ++  +R  G +
Sbjct: 908 ILDLTDCSQLKSFPEISTHISELRLKGTA 936



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 26/169 (15%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   +  ++  + LSD  D++EL  +IE L  L  L L  C +L +LP +I+A   L
Sbjct: 730 KLWEGTKQLRNLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNL 788

Query: 708 STLNLSGLSKFREFPEITSSRD----------QLLEIHLE-GTA-------IRG------ 743
             L+L+  S+  + P I +  +           L+E+ L  GTA       IRG      
Sbjct: 789 QGLSLTNCSRVVKLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVK 848

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           LP+SI  ++     +L +C NL  LPS+I  L+ L M+   GCSKL+ +
Sbjct: 849 LPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETL 897



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 78/184 (42%), Gaps = 54/184 (29%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  M +L +  L   S + E+PSSI  L  L +L ++GC  L +LP  I+ L  LR L+L
Sbjct: 853  IGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNIN-LISLRILDL 911

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI------------------------ 95
            + CS+LK FP+I      +S+L L GT+I EVP SI                        
Sbjct: 912  TDCSQLKSFPEISTH---ISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHAL 968

Query: 96   --------------------ELLPGLELLYLNECKNLVRLPSSINGLKSL-----KTLNL 130
                                + +  L  L LN C +LV LP   + L  +     K+L  
Sbjct: 969  DIITDLLLVSEDIQEVPPWVKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLER 1028

Query: 131  SGCC 134
              CC
Sbjct: 1029 LDCC 1032



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS+ +++ EL  +I  L  L  L + GC  LE LP  I+ +  L  L+L+  S+ + FPE
Sbjct: 864 LSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNINLIS-LRILDLTDCSQLKSFPE 922

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           I++    + E+ L+GTAI+ +P SI   S   +  +   ++LK  P  ++ +  L
Sbjct: 923 IST---HISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDL 974


>gi|297800054|ref|XP_002867911.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313747|gb|EFH44170.1| hypothetical protein ARALYDRAFT_914672 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 966

 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 222/522 (42%), Gaps = 100/522 (19%)

Query: 5   KDLSDLYLDGTSITEVPSSIELL-------TGLELLTLKGCKNLSSLPVTISSLKCLRTL 57
           K+L +L L  +SI +V   +++L         L  L ++GC +L ++P   ++L  L+ L
Sbjct: 440 KNLVNLSLPYSSIKQVWEGVKVLPEKMGNMKSLVFLNMRGCTSLRNIPK--ANLSSLKVL 497

Query: 58  ELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
            LS CS+ ++F Q+++  E+L  LYLDGT++  +P +I  L  L LL L  CK L  LPS
Sbjct: 498 ILSDCSRFQEF-QVIS--ENLETLYLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPS 554

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
           S+  LK+L+ L LSGC KL++ P   G ++ L  L   GTA++     +   ++L+ L  
Sbjct: 555 SLRKLKALEDLILSGCSKLKSFPTDTGNMKHLRILLYDGTALKEIQMILHFKESLQRLCL 614

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           SG        +  ++LP N               +  +  L  LDL  C           
Sbjct: 615 SG--------NSMINLPAN---------------IKQLNHLKWLDLKYC----------- 640

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
           +NL  L           TLP       NLE L+   C +L+ +   P  +  +    CS+
Sbjct: 641 ENLIELP----------TLPP------NLEYLDAHGCHKLEHVMD-PLAIALITEQTCST 683

Query: 298 LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH----KLSIV 353
            +                NC +  +  R    + +  +  L      D G          
Sbjct: 684 FI--------------FTNCTNLEEDARNTITSYAERKCQLHACKCYDMGFVSRASFKTC 729

Query: 354 FPGSQIPKWFMYQNEGSSITVT-RPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPA 412
           FPG ++P WF +Q  GS +    +P++  N+  V G A+C V     +      F    A
Sbjct: 730 FPGCEVPLWFQHQAVGSVLEKRLQPNWCDNL--VSGIALCAVVSFQDNKQLIDCFSVKCA 787

Query: 413 HELECSMDGSGEGHYIYFR-GKF---GHVVSDHLWLLFLPRHGHNWQFESNL-------- 460
            E +   D +G      F+ G +   G   SDH+++ +        + ES          
Sbjct: 788 SEFK---DDNGSCISSNFKVGSWTEPGKTNSDHVFIGYASFSKITKRVESKYSGKCIPAE 844

Query: 461 IRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFT 502
             L F +++D T +V +CGF  +Y+       +    S +F+
Sbjct: 845 ATLKF-NVTDGTHEVVKCGFRLVYVEPNNLLSKEKSSSGQFS 885



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 5/124 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L + GC +L  +P+  + L  L  L LS  S+F+EF  I+ + + L   +L+GTA+ 
Sbjct: 472 LVFLNMRGCTSLRNIPK--ANLSSLKVLILSDCSRFQEFQVISENLETL---YLDGTALE 526

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP +I  L   +L NL+ CK L+ LPS++  L++L  +  SGCSKLK+     G ++ L
Sbjct: 527 TLPPAIGNLQRLVLLNLRSCKALEHLPSSLRKLKALEDLILSGCSKLKSFPTDTGNMKHL 586

Query: 803 EVRL 806
            + L
Sbjct: 587 RILL 590



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 30/212 (14%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           +CSR  E      ++  +  DGT +  L  AI  L  LV L L  CK LE LP ++  LK
Sbjct: 501 DCSRFQEFQVISENLETLYLDGTALETLPPAIGNLQRLVLLNLRSCKALEHLPSSLRKLK 560

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR----------------------- 742
            L  L LSG SK + FP  T +   L  +  +GTA++                       
Sbjct: 561 ALEDLILSGCSKLKSFPTDTGNMKHLRILLYDGTALKEIQMILHFKESLQRLCLSGNSMI 620

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LPA+I+ L+     +LK C+NL  LP+    L  L      GC KL++V + L      
Sbjct: 621 NLPANIKQLNHLKWLDLKYCENLIELPTLPPNLEYLD---AHGCHKLEHVMDPLAIALIT 677

Query: 803 EVRLSSWNRPKMQNDFDCVEQSAVETVTKLAK 834
           E   S++      N    +E+ A  T+T  A+
Sbjct: 678 EQTCSTFIFTNCTN----LEEDARNTITSYAE 705


>gi|357500609|ref|XP_003620593.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355495608|gb|AES76811.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 1196

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 223/477 (46%), Gaps = 31/477 (6%)

Query: 27   LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
            ++ L LL +    N+S   +++S+   LR ++ +G    K  P      E L +L L  +
Sbjct: 576  MSNLRLLIIMWGVNISGSLLSLSNK--LRYVQWTG-YPFKYLPSNFHPNE-LVELILHSS 631

Query: 87   SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
            +I ++    + LP L  L L   K LV++        +L+ LNL GC  L  +  ++G +
Sbjct: 632  NIKQLWRKKKYLPNLRGLDLRYSKKLVKI-VDFGEFPNLEWLNLEGCISLLELDPSIGLL 690

Query: 147  ESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
             +L  L++     +    ++IF + +L+ LY   C++   +    L  P ++   +S   
Sbjct: 691  RNLVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHKAFTNQR-DLKNP-DISESASHSR 748

Query: 206  ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
            + +L SL  +  L ++++S C L + +    I+ L+ L+ L L  NNFVTLP S+  L  
Sbjct: 749  SYVLSSLHSLYCLREVNISFCRLSQVSYA--IECLYWLEILNLGGNNFVTLP-SLRKLSK 805

Query: 266  LEELELEDCKRLQSLPQIP--PNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKL 323
            L  L LE CK L+SLPQ+P   N+        +    LF       ++  I NC    + 
Sbjct: 806  LVYLNLEHCKLLESLPQLPFPTNIGEDHRENNNKFHDLFTRKV---TQLVIFNCPKLGER 862

Query: 324  LRKNGLAISMLREYLELQAVSDPG---HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYL 380
             R + +A S + ++++      P      + IV PGS+IP W   Q+ GSSI + R   +
Sbjct: 863  ERCSSMAFSWMIQFIQAYQHFYPASLFEGIHIVTPGSEIPSWINNQSVGSSIPIDRSPIM 922

Query: 381  Y-NVNKVVGFAICCVFQV-PKHSTGTYLFHSYPAHELECSMDG-SGEGHYIYFRGKFGHV 437
            + N N ++GF  C VF V P      ++       +++  +D  S     +  +      
Sbjct: 923  HDNNNNIIGFVCCAVFSVAPNQEILPWI------ADIKLVIDSLSSFSVPVILKRYLITT 976

Query: 438  VSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
             S HLW+++L R  ++ +FE   I        D   +V  CG+  +   +++EF+ T
Sbjct: 977  KSSHLWIIYLSRESYD-KFEK--ISCYIVGGEDLGMEVNSCGYRWVCKQDLQEFNLT 1030



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 72/156 (46%), Gaps = 23/156 (14%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G  S+ E+  SI LL  L  L LK CKNL S+P  I  L  L+ L +  C K
Sbjct: 668 NLEWLNLEGCISLLELDPSIGLLRNLVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHK 727

Query: 65  LK------KFPQIVAS--------MEDLSKLY------LDGTSIAEVPSSIELLPGLELL 104
                   K P I  S        +  L  LY      +    +++V  +IE L  LE+L
Sbjct: 728 AFTNQRDLKNPDISESASHSRSYVLSSLHSLYCLREVNISFCRLSQVSYAIECLYWLEIL 787

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
            L    N V LP S+  L  L  LNL  C  LE++P
Sbjct: 788 NLG-GNNFVTLP-SLRKLSKLVYLNLEHCKLLESLP 821



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 15/113 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSK------FREFPEITSSRDQLLEIHL 736
           LV+L L+   N+++L R    L  L  L+L    K      F EFP        L  ++L
Sbjct: 623 LVELILHS-SNIKQLWRKKKYLPNLRGLDLRYSKKLVKIVDFGEFP-------NLEWLNL 674

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           EG  ++  L  SI LL   +  NLKDCKNL S+P+ I GL SL+ +Y   C K
Sbjct: 675 EGCISLLELDPSIGLLRNLVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHK 727


>gi|297791249|ref|XP_002863509.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309344|gb|EFH39768.1| hypothetical protein ARALYDRAFT_916982 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1133

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 165/384 (42%), Gaps = 100/384 (26%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           L+ L L+GC +L SL    S  K L+TL LSGC+  K+FP I    E+L  L+LD T+I+
Sbjct: 680 LQGLNLEGCTSLESLGDVDS--KSLKTLTLSGCTSFKEFPLIP---ENLEALHLDRTAIS 734

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           +                        LP +I  LK L  L +  C  LEN+P  + ++ +L
Sbjct: 735 Q------------------------LPDNIVNLKKLVLLTMKDCKMLENIPTEVDELTAL 770

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           ++L +SG               L+   F   N+ P        L    L  +S      L
Sbjct: 771 QKLVLSGC--------------LKLKEFPAINKSP--------LKILFLDGTSIKTVPQL 808

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLEE 268
           PS+                               + LYL+RN+ ++ LPA I+ L  L  
Sbjct: 809 PSV-------------------------------QYLYLSRNDEISYLPAGINQLFQLTW 837

Query: 269 LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINCI---- 318
           L+L+ CK L S+P++PPNL ++ A+GCSSL T+   L            +   NC     
Sbjct: 838 LDLKYCKSLTSIPELPPNLHYLDAHGCSSLKTVAKPLARILPTVQNHCSFNFTNCCKLEQ 897

Query: 319 ---DSLKLL-RKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
              D + L  ++    +S  R++      S+     S  FPG ++P WF ++  GS +  
Sbjct: 898 AAKDEITLYSQRKCQLLSYARKHYNGGLSSEA--LFSTCFPGCEVPSWFCHEAVGSLLGR 955

Query: 375 TRPSYLYNVNKVVGFAICCVFQVP 398
             P + ++  K+ G ++C V   P
Sbjct: 956 KLPPH-WHEKKLSGISLCAVVSFP 978



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 99/181 (54%), Gaps = 14/181 (7%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  L+LD T+I+++P +I  L  L LLT+K CK L ++P  +  L  L+ L LSGC K
Sbjct: 721 ENLEALHLDRTAISQLPDNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLK 780

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LK+FP I  S   L  L+LDGTSI  VP     LP ++ LYL+    +  LP+ IN L  
Sbjct: 781 LKEFPAINKS--PLKILFLDGTSIKTVPQ----LPSVQYLYLSRNDEISYLPAGINQLFQ 834

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIF-LMKNLRSLYFSG 179
           L  L+L  C  L ++P+      +L  LD  G      + +P + I   ++N  S  F+ 
Sbjct: 835 LTWLDLKYCKSLTSIPEL---PPNLHYLDAHGCSSLKTVAKPLARILPTVQNHCSFNFTN 891

Query: 180 C 180
           C
Sbjct: 892 C 892



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 5/105 (4%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GC +LE L    S  K L TL LSG + F+EFP I    + L  +HL+ TAI  LP
Sbjct: 683 LNLEGCTSLESLGDVDS--KSLKTLTLSGCTSFKEFPLIP---ENLEALHLDRTAISQLP 737

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            +I  L   +L  +KDCK L+++P+ ++ L +L+ +  SGC KLK
Sbjct: 738 DNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLVLSGCLKLK 782



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 75/168 (44%), Gaps = 29/168 (17%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP I + L     D T I +L   I  L  LV LT+  CK LE +P  +  L  L  L 
Sbjct: 715 EFPLIPENLEALHLDRTAISQLPDNIVNLKKLVLLTMKDCKMLENIPTEVDELTALQKLV 774

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRG--------------------LPASIELL 751
           LSG  K +EFP I  S  ++L   L+GT+I+                     LPA I  L
Sbjct: 775 LSGCLKLKEFPAINKSPLKIL--FLDGTSIKTVPQLPSVQYLYLSRNDEISYLPAGINQL 832

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
                 +LK CK+L S+P     L  L      GCS LK V + L ++
Sbjct: 833 FQLTWLDLKYCKSLTSIPELPPNLHYLDA---HGCSSLKTVAKPLARI 877


>gi|168043924|ref|XP_001774433.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674285|gb|EDQ60796.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 148/281 (52%), Gaps = 6/281 (2%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +T +P  +  LT +  L L GC +L+SLP  + +L  L +L++SGCS L   P  + ++ 
Sbjct: 5   LTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELHNLA 64

Query: 77  DLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            L+ L L G S +  +P+ ++ L  L  L L+ C NL  LP+ ++ L SL +LN++GC  
Sbjct: 65  SLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNINGCSS 124

Query: 136 LENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLHL 193
           L ++P+ LG + SL  L+++  +++    + +  + +L SL  SGC N        H   
Sbjct: 125 LTSLPNELGNLTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNLTSLLNELHNLA 184

Query: 194 PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-N 251
               L  S CP    LP+ L  + SL  LDLS C     ++P+++DN  SL  L +N  +
Sbjct: 185 SLTSLNLSGCPSLTSLPNELGNLTSLISLDLSGCS-NLTSLPNELDNFTSLTSLNINGCS 243

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +  +LP  +  L +L  + L  C  L SLP    NL  + +
Sbjct: 244 SLTSLPNELGNLTSLTSINLSWCSNLTSLPNELGNLASLTS 284



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 149/296 (50%), Gaps = 27/296 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + +   L+ L ++G +S+T +P+ +  LT L  + L  C NL+SLP  + +L  L +  +
Sbjct: 228 LDNFTSLTSLNINGCSSLTSLPNELGNLTSLTSINLSWCSNLTSLPNELGNLASLTSFNI 287

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C KL   P  +  +  L+   L   +S+  +P+ +  L  L  L L+EC NL  LP+ 
Sbjct: 288 SECWKLISLPNELGKLTSLTSFNLSWCSSLTSLPNELGHLVSLTSLNLSECSNLTSLPNE 347

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  L SL  L+LSGC  L ++P+ LG + SL  L+++G++    TS    + NL SL   
Sbjct: 348 LGKLTSLILLDLSGCSNLTSLPNELGNLTSLTSLNINGSS--NLTSLPNELGNLTSL--- 402

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                    S H+         S C     LP+ L  + SLT L LS+C     ++P+++
Sbjct: 403 --------TSLHI---------SECMRLTSLPNELGNLKSLTSLILSECS-SLTSLPNEL 444

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            NL SL  L L+  ++  +LP  +  L +L  L L  C+ L SLP    NL  + +
Sbjct: 445 GNLKSLTSLILSECSSLTSLPNELGNLTSLTSLNLSGCRHLTSLPNELGNLTSLTS 500



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 130/271 (47%), Gaps = 31/271 (11%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
           C  L+SLP  + +L  + +L LSGCS L   P  + ++  L  L + G            
Sbjct: 2   CSKLTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISG------------ 49

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
                      C NL+ LP+ ++ L SL +LNLSGC  L ++P+ L  + SL  LD+SG 
Sbjct: 50  -----------CSNLISLPNELHNLASLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGC 98

Query: 158 A-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPS-LTG 214
           + +    + +  + +L SL  +GC+   +  +   +L     L  + C     LP+ L  
Sbjct: 99  SNLTSLPNELDNLTSLTSLNINGCSSLTSLPNELGNLTSLTSLNINECSSLTSLPNELGN 158

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELED 273
           + SL  LDLS C     ++ +++ NL SL  L L+   +  +LP  +  L +L  L+L  
Sbjct: 159 LTSLISLDLSGCS-NLTSLLNELHNLASLTSLNLSGCPSLTSLPNELGNLTSLISLDLSG 217

Query: 274 CKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           C  L SLP    N   L  +  NGCSSL +L
Sbjct: 218 CSNLTSLPNELDNFTSLTSLNINGCSSLTSL 248



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 2/148 (1%)

Query: 10  LYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           L L G S +T +P+ +  LT L  L + G  NL+SLP  + +L  L +L +S C +L   
Sbjct: 357 LDLSGCSNLTSLPNELGNLTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISECMRLTSL 416

Query: 69  PQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           P  + +++ L+ L L + +S+  +P+ +  L  L  L L+EC +L  LP+ +  L SL +
Sbjct: 417 PNELGNLKSLTSLILSECSSLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLTSLTS 476

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVS 155
           LNLSGC  L ++P+ LG + SL  LD+S
Sbjct: 477 LNLSGCRHLTSLPNELGNLTSLTSLDLS 504



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 2/142 (1%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L ++G+S +T +P+ +  LT L  L +  C  L+SLP  + +LK L +L L
Sbjct: 372 LGNLTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISECMRLTSLPNELGNLKSLTSLIL 431

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S CS L   P  + +++ L+ L L + +S+  +P+ +  L  L  L L+ C++L  LP+ 
Sbjct: 432 SECSSLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLTSLTSLNLSGCRHLTSLPNE 491

Query: 119 INGLKSLKTLNLSGCCKLENVP 140
           +  L SL +L+LS C  L+ +P
Sbjct: 492 LGNLTSLTSLDLSWCLNLKTLP 513



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 5/161 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS+L     E  ++  +    LS  + +  L   +  L  L+ L ++GC NL  LP  + 
Sbjct: 2   CSKLTSLPKELVNLTFITSLNLSGCSSLTSLPNELGNLTSLISLDISGCSNLISLPNELH 61

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKD 761
            L  L++LNLSG S     P    +   L+ + L G + +  LP  ++ L+     N+  
Sbjct: 62  NLASLTSLNLSGCSNLTSLPNELDNLTSLISLDLSGCSNLTSLPNELDNLTSLTSLNING 121

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           C +L SLP+ +  L SL  +  + CS L ++   LG + SL
Sbjct: 122 CSSLTSLPNELGNLTSLTSLNINECSSLTSLPNELGNLTSL 162



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 11/164 (6%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E   +V +    LS+ +++  L   +  L  L+ L L+GC NL  LP  + 
Sbjct: 314 CSSLTSLPNELGHLVSLTSLNLSECSNLTSLPNELGKLTSLILLDLSGCSNLTSLPNELG 373

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLP---ASIELLSGNILSN 758
            L  L++LN++G S     P    +   L  +H+ E   +  LP    +++ L+  ILS 
Sbjct: 374 NLTSLTSLNINGSSNLTSLPNELGNLTSLTSLHISECMRLTSLPNELGNLKSLTSLILS- 432

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             +C +L SLP+ +  L+SL  +  S CS L ++   LG + SL
Sbjct: 433 --ECSSLTSLPNELGNLKSLTSLILSECSSLTSLPNELGNLTSL 474



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 31/231 (13%)

Query: 610 QQGQFVKMISVD-SGCMSCYKKWGR-QTVRRQSPQEPGNCSRLWEEADEFPDIVQV---- 663
           + G    +IS+D SGC +          +   +      CS L    +E  ++  +    
Sbjct: 35  ELGNLTSLISLDISGCSNLISLPNELHNLASLTSLNLSGCSNLTSLPNELDNLTSLISLD 94

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  +++  L   ++ L  L  L +NGC +L  LP  +  L  L++LN++  S     P 
Sbjct: 95  LSGCSNLTSLPNELDNLTSLTSLNINGCSSLTSLPNELGNLTSLTSLNINECSSLTSLPN 154

Query: 724 ITSSRDQLLEIHLEGTA-------------------IRGLPASIELLS--GNILS----N 758
              +   L+ + L G +                   + G P+   L +  GN+ S    +
Sbjct: 155 ELGNLTSLISLDLSGCSNLTSLLNELHNLASLTSLNLSGCPSLTSLPNELGNLTSLISLD 214

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
           L  C NL SLP+ ++   SL  +  +GCS L ++   LG + SL     SW
Sbjct: 215 LSGCSNLTSLPNELDNFTSLTSLNINGCSSLTSLPNELGNLTSLTSINLSW 265



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 24/189 (12%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CS L    +E  ++  +    LS  +++  L   +  L  L  
Sbjct: 129 PNELGNLTSLTSLNINECSSLTSLPNELGNLTSLISLDLSGCSNLTSLLNELHNLASLTS 188

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           L L+GC +L  LP  +  L  L +L+LSG S     P    +   L  +++ G +++  L
Sbjct: 189 LNLSGCPSLTSLPNELGNLTSLISLDLSGCSNLTSLPNELDNFTSLTSLNINGCSSLTSL 248

Query: 745 PASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           P  +    GN+ S    NL  C NL SLP+ +  L SL     S C KL ++   LGK+ 
Sbjct: 249 PNEL----GNLTSLTSINLSWCSNLTSLPNELGNLASLTSFNISECWKLISLPNELGKLT 304

Query: 801 SLEVRLSSW 809
           SL     SW
Sbjct: 305 SLTSFNLSW 313



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 31/200 (15%)

Query: 610 QQGQFVKMISVD-SGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDG- 667
           + G    +IS+D SGC                     N + L  E D F  +  +  +G 
Sbjct: 203 ELGNLTSLISLDLSGC--------------------SNLTSLPNELDNFTSLTSLNINGC 242

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           + +  L   +  L  L  + L+ C NL  LP  +  L  L++ N+S   K    P     
Sbjct: 243 SSLTSLPNELGNLTSLTSINLSWCSNLTSLPNELGNLASLTSFNISECWKLISLPNELGK 302

Query: 728 RDQLLEIHLE-GTAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMY 782
              L   +L   +++  LP  +    G+++S    NL +C NL SLP+ +  L SL ++ 
Sbjct: 303 LTSLTSFNLSWCSSLTSLPNEL----GHLVSLTSLNLSECSNLTSLPNELGKLTSLILLD 358

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGCS L ++   LG + SL
Sbjct: 359 LSGCSNLTSLPNELGNLTSL 378


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 35/317 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  +++L  L+L+   +  +P  I  L  L+ L L  C  L  LP  +  LK L+ L+L 
Sbjct: 88  MEELENLKVLFLNVNRLKLLPDEIGKLVSLQELCL-SCNELKLLPAKMVELKSLQKLDL- 145

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++ +KFP +V  ++ L +L L G  +  +P+ I  L  L+ L L+E  +L  LP+ I 
Sbjct: 146 WKNRFEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQDLDLHE-NSLKTLPTEIE 204

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LKSL+ LNL    + E++P  +G + +L+ELD+    ++    +I  +K+LR L F   
Sbjct: 205 KLKSLQKLNLQNN-RFESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSF--- 260

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                     +H  F      S P  ++      + +L +L+  D  L    +P +I  L
Sbjct: 261 ----------IHNEF-----ESLPTKVI-----ELRNLRELNFDDNKL--KLLPVEIGEL 298

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP---NLQFVR--ANGC 295
            +L++LYL+ NN  TLP +I GL +L EL L     L+SLP +     NLQ++    N  
Sbjct: 299 KNLQKLYLSGNNLKTLPDTIGGLKDLRELSL-SGNELESLPAVIGNLVNLQYLNLDHNKL 357

Query: 296 SSLVTLFGALKLCRSKY 312
            +L    G LK  R  Y
Sbjct: 358 KTLPDTIGELKNLRKLY 374



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 53/230 (23%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           + L+  P ++  +E+L  L+L+   +  +P  I  L  L+ L L+ C  L  LP+ +  L
Sbjct: 79  NNLETLPPVMEELENLKVLFLNVNRLKLLPDEIGKLVSLQELCLS-CNELKLLPAKMVEL 137

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           KSL+ L+L    + E  P+ +G+++SL+ELD+SG  +                       
Sbjct: 138 KSLQKLDL-WKNRFEKFPNVVGELKSLQELDLSGNKLES--------------------- 175

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                                     LP++ G + +L  LDL +  L    +P++I+ L 
Sbjct: 176 --------------------------LPAVIGNLINLQDLDLHENSL--KTLPTEIEKLK 207

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           SL++L L  N F +LPA I  L NL+EL+L D  +L++LP     L+ +R
Sbjct: 208 SLQKLNLQNNRFESLPAVIGNLTNLQELDL-DHNKLKTLPDTIGELKDLR 256



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 10/95 (10%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
           C  L+ LP  +  LK L  L+L   ++F +FP +      L E+ L G  +  LPA I  
Sbjct: 124 CNELKLLPAKMVELKSLQKLDLWK-NRFEKFPNVVGELKSLQELDLSGNKLESLPAVI-- 180

Query: 751 LSGNILSNLKDC----KNLKSLPSTINGLRSLRMM 781
             GN++ NL+D      +LK+LP+ I  L+SL+ +
Sbjct: 181 --GNLI-NLQDLDLHENSLKTLPTEIEKLKSLQKL 212



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 13/136 (9%)

Query: 657 FPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
            PD +  L D       G ++  L   I  L  L  L L+  K L+ LP TI  LK L  
Sbjct: 314 LPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNK-LKTLPDTIGELKNLRK 372

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI-LSNLK--DCKNLK 766
           L L G SK    P      + L ++HL G  +  LP  IE LSG++ L NL+  +   + 
Sbjct: 373 LYLGG-SKLEILPVAIGELENLQKLHLSGNKLETLPIEIEKLSGSLRLLNLRGNNISEVG 431

Query: 767 SLPSTINGLRSLRMMY 782
               T+ G R LR ++
Sbjct: 432 DGERTV-GWRELRAIF 446



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 62/243 (25%)

Query: 616 KMISVDSGCMSC--YKKWGRQTVRRQSPQEPGNCSRLWEEA-DEFPDIVQVLSD------ 666
           K++S+   C+SC   K    + V  +S Q+      LW+   ++FP++V  L        
Sbjct: 113 KLVSLQELCLSCNELKLLPAKMVELKSLQKLD----LWKNRFEKFPNVVGELKSLQELDL 168

Query: 667 -GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
            G  +  L   I  L  L  L L+   +L+ LP  I  LK L  LNL   ++F   P + 
Sbjct: 169 SGNKLESLPAVIGNLINLQDLDLHE-NSLKTLPTEIEKLKSLQKLNLQN-NRFESLPAVI 226

Query: 726 SSRDQLLEIHLEGTAIRGLPASI-ELLSGNILS----------------------NLKDC 762
            +   L E+ L+   ++ LP +I EL    ILS                      N  D 
Sbjct: 227 GNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDN 286

Query: 763 K----------------------NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           K                      NLK+LP TI GL+ LR +  SG ++L+++   +G + 
Sbjct: 287 KLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSG-NELESLPAVIGNLV 345

Query: 801 SLE 803
           +L+
Sbjct: 346 NLQ 348


>gi|15230461|ref|NP_190049.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|30692207|ref|NP_850654.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6967111|emb|CAB72465.1| disease resistance protein homolog [Arabidopsis thaliana]
 gi|28973753|gb|AAO64192.1| putative disease resistance protein homolog [Arabidopsis thaliana]
 gi|332644404|gb|AEE77925.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644405|gb|AEE77926.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1214

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 148/293 (50%), Gaps = 15/293 (5%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D   + E+PSSIE LT L++L L+ C +L  LP +I++   L+ L L+ CS++ K P I 
Sbjct: 748  DSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNLQGLSLTNCSRVVKLPAI- 805

Query: 73   ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             ++ +L +L L   +S+ E+P SI     L  L +  C +LV+LPSSI  + +LK  +LS
Sbjct: 806  ENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKEFDLS 865

Query: 132  GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             C  L  +P ++G ++ L  L + G +      +   + +LR L  + C++  +      
Sbjct: 866  NCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNINLISLRILDLTDCSQLKSFPEIST 925

Query: 192  HL-PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA--AIPSDIDNLHSLKELYL 248
            H+    L G +   V L       + S ++L + +    E+    P  +D    + +L L
Sbjct: 926  HISELRLKGTAIKEVPL------SITSWSRLAVYEMSYFESLKEFPHALD---IITDLLL 976

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
               +   +P  +  +  L  L L +C  L SLPQ+P +L ++ A+ C SL  L
Sbjct: 977  VSEDIQEVPPWVKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERL 1029



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 20/209 (9%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L  L+ + L++ ++L  LPSSI  L SL+ L+L  C  L  +P ++    +L+ L ++  
Sbjct: 738 LRNLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSIN-ANNLQGLSLTNC 796

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCN---EPPASAS-----WHLHLPFNLLGKSSCPVALML 209
           +      +I  + NL  L    C+   E P S       W L +         C   + L
Sbjct: 797 SRVVKLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDI-------RGCSSLVKL 849

Query: 210 PSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLE 267
           PS  G + +L + DLS+C      +PS I NL  L  L +   +   TLP +I+ L++L 
Sbjct: 850 PSSIGDMTNLKEFDLSNCS-NLVELPSSIGNLQKLFMLRMRGCSKLETLPTNIN-LISLR 907

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            L+L DC +L+S P+I  ++  +R  G +
Sbjct: 908 ILDLTDCSQLKSFPEISTHISELRLKGTA 936



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 26/169 (15%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   +  ++  + LSD  D++EL  +IE L  L  L L  C +L +LP +I+A   L
Sbjct: 730 KLWEGTKQLRNLKWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNL 788

Query: 708 STLNLSGLSKFREFPEITSSRD----------QLLEIHLE-GTA-------IRG------ 743
             L+L+  S+  + P I +  +           L+E+ L  GTA       IRG      
Sbjct: 789 QGLSLTNCSRVVKLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVK 848

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           LP+SI  ++     +L +C NL  LPS+I  L+ L M+   GCSKL+ +
Sbjct: 849 LPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETL 897



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 79/184 (42%), Gaps = 54/184 (29%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  M +L +  L   S + E+PSSI  L  L +L ++GC  L +LP  I+ L  LR L+L
Sbjct: 853  IGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNIN-LISLRILDL 911

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI------------------------ 95
            + CS+LK FP+I      +S+L L GT+I EVP SI                        
Sbjct: 912  TDCSQLKSFPEISTH---ISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHAL 968

Query: 96   --------------ELLP------GLELLYLNECKNLVRLPSSINGLKSL-----KTLNL 130
                          E+ P       L  L LN C +LV LP   + L  +     K+L  
Sbjct: 969  DIITDLLLVSEDIQEVPPWVKRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLER 1028

Query: 131  SGCC 134
              CC
Sbjct: 1029 LDCC 1032



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS+ +++ EL  +I  L  L  L + GC  LE LP  I+ +  L  L+L+  S+ + FPE
Sbjct: 864 LSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNINLIS-LRILDLTDCSQLKSFPE 922

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           I++    + E+ L+GTAI+ +P SI   S   +  +   ++LK  P  ++ +  L
Sbjct: 923 IST---HISELRLKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDL 974


>gi|449528475|ref|XP_004171230.1| PREDICTED: uncharacterized protein LOC101229421 [Cucumis sativus]
          Length = 666

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 194/441 (43%), Gaps = 55/441 (12%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNEC 109
           LK L+ L+L+ C KL+K P   ++  +L KLYL + T++  +  SI  L  L  L L +C
Sbjct: 2   LKSLKVLKLAYCKKLEKLPDF-STASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKC 60

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFL 168
            NL +LPS +  LKSL+ LNL+ C KLE +PD      +L+ L +   T +R    SI  
Sbjct: 61  SNLEKLPSYLT-LKSLEYLNLAHCKKLEEIPD-FSSALNLKSLYLEQCTNLRVIHESIGS 118

Query: 169 MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKLDLSDCG 227
           + +L +L    C       S+           S C    M P +   + SL  L L    
Sbjct: 119 LNSLVTLDLRQCTNLEKLPSYLKLKSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTA 178

Query: 228 LGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
           + E  +PS I  L +L  L L+   N ++LP++I  L++L  L+L +CK LQ +P +P  
Sbjct: 179 IRE--LPSSIGYLTALFVLNLHGCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHC 236

Query: 287 LQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAI-SMLREYLELQAVSD 345
           +Q + A GC    TL G     RS   I++ I S     K  +A+    RE+        
Sbjct: 237 IQKMDATGC----TLLG-----RSPDNIMDIISS-----KQDVALGDFTREF-------- 274

Query: 346 PGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY 405
                  V   + IP+WF YQ+  +SI   R S+ +++N     A     QV        
Sbjct: 275 -------VLMNTGIPEWFSYQSISNSI---RVSFRHDLNMERILATYATLQV-------- 316

Query: 406 LFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESN-----L 460
           +  SY    L       G      F  KF    S++ WL+       +   E N      
Sbjct: 317 VGDSYQGMALVSCKIFIGYRLQSCFMRKFPSSTSEYTWLVTTSSPTFSTSLEMNEWNHVT 376

Query: 461 IRLSFRSISDPTWKVKRCGFH 481
           +       S+ T  +K CG H
Sbjct: 377 VWFEVVKCSEATVTIKCCGVH 397



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 5/160 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +S  +L  LYL+  T++  +  SI  L  L  L L+ C NL  LP  +  LK LR  EL
Sbjct: 92  FSSALNLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLK-LKSLRHFEL 150

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGC KL+ FP+I  +M+ L  L+LD T+I E+PSSI  L  L +L L+ C NL+ LPS+I
Sbjct: 151 SGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSIGYLTALFVLNLHGCTNLISLPSTI 210

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             L SL  L L  C  L+ +P+       ++++D +G  +
Sbjct: 211 YLLMSLWNLQLRNCKFLQEIPNL---PHCIQKMDATGCTL 247



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 8/231 (3%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++  +L  LYL + T++  +  SI  L+ L  L L  C NL  LP  ++ LK L  L L
Sbjct: 22  FSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYLT-LKSLEYLNL 80

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           + C KL++ P   +++ +L  LYL+  T++  +  SI  L  L  L L +C NL +LPS 
Sbjct: 81  AHCKKLEEIPDFSSAL-NLKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSY 139

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  LKSL+   LSGC KLE  P     ++SL  L +  TAIR   SSI  +  L  L   
Sbjct: 140 LK-LKSLRHFELSGCHKLEMFPKIAENMKSLISLHLDSTAIRELPSSIGYLTALFVLNLH 198

Query: 179 GC-NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           GC N     ++ +L +    L   +C     +P+L     + K+D + C L
Sbjct: 199 GCTNLISLPSTIYLLMSLWNLQLRNCKFLQEIPNLPHC--IQKMDATGCTL 247



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 94/186 (50%), Gaps = 7/186 (3%)

Query: 612 GQFVKMISVDSG-CMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQV----LSD 666
           G   K++++D G C +  K     T++        +C +L EE  +F   + +    L  
Sbjct: 47  GSLSKLVTLDLGKCSNLEKLPSYLTLKSLEYLNLAHCKKL-EEIPDFSSALNLKSLYLEQ 105

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
            T++R +  +I  L  LV L L  C NLE+LP  +  LK L    LSG  K   FP+I  
Sbjct: 106 CTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLK-LKSLRHFELSGCHKLEMFPKIAE 164

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           +   L+ +HL+ TAIR LP+SI  L+   + NL  C NL SLPSTI  L SL  +    C
Sbjct: 165 NMKSLISLHLDSTAIRELPSSIGYLTALFVLNLHGCTNLISLPSTIYLLMSLWNLQLRNC 224

Query: 787 SKLKNV 792
             L+ +
Sbjct: 225 KFLQEI 230



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 4/140 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + T++R +  +I  L  LV L L  C NLE+LP  ++ LK L  LNL+   K  E P+
Sbjct: 33  LKECTNLRMIHDSIGSLSKLVTLDLGKCSNLEKLPSYLT-LKSLEYLNLAHCKKLEEIPD 91

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            +S+ + L  ++LE  T +R +  SI  L+  +  +L+ C NL+ LPS +  L+SLR   
Sbjct: 92  FSSALN-LKSLYLEQCTNLRVIHESIGSLNSLVTLDLRQCTNLEKLPSYLK-LKSLRHFE 149

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGC KL+   +    ++SL
Sbjct: 150 LSGCHKLEMFPKIAENMKSL 169



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 4/125 (3%)

Query: 679 LLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-E 737
           +L  L  L L  CK LE+LP   S    L  L L   +  R   +   S  +L+ + L +
Sbjct: 1   MLKSLKVLKLAYCKKLEKLP-DFSTASNLEKLYLKECTNLRMIHDSIGSLSKLVTLDLGK 59

Query: 738 GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
            + +  LP+ + L S   L NL  CK L+ +P   + L +L+ +Y   C+ L+ + E++G
Sbjct: 60  CSNLEKLPSYLTLKSLEYL-NLAHCKKLEEIPDFSSAL-NLKSLYLEQCTNLRVIHESIG 117

Query: 798 KVESL 802
            + SL
Sbjct: 118 SLNSL 122



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 34/71 (47%)

Query: 654 ADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLS 713
           A+    ++ +  D T IREL  +I  L  L  L L+GC NL  LP TI  L  L  L L 
Sbjct: 163 AENMKSLISLHLDSTAIRELPSSIGYLTALFVLNLHGCTNLISLPSTIYLLMSLWNLQLR 222

Query: 714 GLSKFREFPEI 724
                +E P +
Sbjct: 223 NCKFLQEIPNL 233


>gi|359477831|ref|XP_002282906.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 879

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/126 (48%), Positives = 84/126 (66%), Gaps = 1/126 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE+LTL+GC NL  LP  I  LK L+TL  +GCSKL++FP+I+A+M  L  L L GT+I 
Sbjct: 655 LEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIM 714

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           ++PSSI  L GL+ L L EC  L ++PS I  L SLK LNL G     ++P T+ ++  L
Sbjct: 715 DLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEG-GHFSSIPPTINQLSRL 773

Query: 150 EELDVS 155
           + L++S
Sbjct: 774 KALNLS 779



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 84/187 (44%), Gaps = 47/187 (25%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL  LP  I  LK L+TL+ +GC KLE  P+ +  +  L  LD+SGT
Sbjct: 652 VPNLEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGT 711

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI  +  L++L    C++        LH                         
Sbjct: 712 AIMDLPSSITHLNGLQTLLLQECSK--------LH------------------------- 738

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
                          IPS I  L SLK+L L   +F ++P +I+ L  L+ L L  C  L
Sbjct: 739 --------------QIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNL 784

Query: 278 QSLPQIP 284
           + +P++P
Sbjct: 785 EQIPELP 791



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 60/100 (60%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLE LPR I  LK+L TL+ +G SK   FPEI ++  +L  + L GTAI  LP
Sbjct: 658 LTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLP 717

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           +SI  L+G     L++C  L  +PS I  L SL+ +   G
Sbjct: 718 SSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEG 757



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 23/94 (24%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL------------------- 41
           MA+M+ L  L L GT+I ++PSSI  L GL+ L L+ C  L                   
Sbjct: 697 MANMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLE 756

Query: 42  ----SSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
               SS+P TI+ L  L+ L LS C+ L++ P++
Sbjct: 757 GGHFSSIPPTINQLSRLKALNLSHCNNLEQIPEL 790


>gi|297804200|ref|XP_002869984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315820|gb|EFH46243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1046

 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 6/180 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  K+L  L L+G TS+  + SSIE +  L  L L+ C +L SLP  I+ LK L+TL L
Sbjct: 645 LSKAKNLERLDLEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESLPEGIN-LKSLKTLIL 703

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS L++F QI++  +++  LYL+G++I +V   IE L  L LL L  C+ L  LP+ +
Sbjct: 704 SGCSNLQEF-QIIS--DNIESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDL 760

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LKSL+ L LSGC  LE++P    ++E LE L + GT+I++   +I L  NL+   F G
Sbjct: 761 YKLKSLQELILSGCSALESLPPIKEEMECLEILLMDGTSIKQTPETICL-SNLKMFSFCG 819



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 4/134 (2%)

Query: 673 LSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLL 732
           L  +IE +  L+ L L  C +LE LP  I+ LK L TL LSG S  +EF  I+   D + 
Sbjct: 665 LGSSIEKMNKLIYLNLRDCTSLESLPEGIN-LKSLKTLILSGCSNLQEFQIIS---DNIE 720

Query: 733 EIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            ++LEG+AI  +   IE L   IL NLK+C+ LK LP+ +  L+SL+ +  SGCS L+++
Sbjct: 721 SLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQELILSGCSALESL 780

Query: 793 TETLGKVESLEVRL 806
                ++E LE+ L
Sbjct: 781 PPIKEEMECLEILL 794



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  LYL+G++I +V   IE L  L LL LK C+ L  LP  +  LK L+ L LSGCS L
Sbjct: 718 NIESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQELILSGCSAL 777

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           +  P I   ME L  L +DGTSI + P +I          L+  K      SSI     L
Sbjct: 778 ESLPPIKEEMECLEILLMDGTSIKQTPETI---------CLSNLKMFSFCGSSIEDSTGL 828

Query: 126 KTLNLSGCCKLENVPD 141
             ++  GC  LE V +
Sbjct: 829 HYVDAHGCVSLEKVAE 844



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 24/286 (8%)

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           LE L L  C +LV L SSI  +  L  LNL  C  LE++P+ +  ++SL+ L +SG +  
Sbjct: 651 LERLDLEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESLPEGIN-LKSLKTLILSGCSNL 709

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLT 219
           +    I    N+ SLY  G                 LL   +C     LP+ L  + SL 
Sbjct: 710 QEFQII--SDNIESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKSLQ 767

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
           +L LS C   E ++P   + +  L+ L ++  +    P +I  L NL+           S
Sbjct: 768 ELILSGCSALE-SLPPIKEEMECLEILLMDGTSIKQTPETIC-LSNLKMFSF-----CGS 820

Query: 280 LPQIPPNLQFVRANGCSSL------VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISM 333
             +    L +V A+GC SL      VTL        + +   NC    +  ++  +A + 
Sbjct: 821 SIEDSTGLHYVDAHGCVSLEKVAEPVTLPLVTDRMHTTFIFTNCFKLNRAEQEAIVAQAQ 880

Query: 334 LREYLELQAVSDPGHK-------LSIVFPGSQIPKWFMYQNEGSSI 372
           L+  L  +      +K       +++ FPGS+IP WF +Q  GS I
Sbjct: 881 LKSQLLARTSLQHNNKGLVLEPLVAVCFPGSEIPSWFSHQRMGSLI 926



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 9/148 (6%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS L E      +I  +  +G+ I ++   IE L  L+ L L  C+ L+ LP  +  LK 
Sbjct: 706 CSNLQEFQIISDNIESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLPNDLYKLKS 765

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L  L LSG S     P I    + L  + ++GT+I+  P +I       LSNL   K   
Sbjct: 766 LQELILSGCSALESLPPIKEEMECLEILLMDGTSIKQTPETI------CLSNL---KMFS 816

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTE 794
              S+I     L  +   GC  L+ V E
Sbjct: 817 FCGSSIEDSTGLHYVDAHGCVSLEKVAE 844


>gi|105923326|gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1368

 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 144/319 (45%), Gaps = 50/319 (15%)

Query: 101  LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
            LE L L  C +LV +   I   KSL +LN+SGC +L+ +P+ +G +E   EL   G    
Sbjct: 753  LEKLLLEGCSSLVEIHQCIGHSKSLVSLNISGCSQLQKLPECMGDIECFTELLADGINNE 812

Query: 161  RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS-CPVALMLPSLTGVCSLT 219
            +  SS+  ++ +R L   G         W+ +LP+     SS  P  L+ P+ T    L 
Sbjct: 813  QFLSSVEHLRCVRKLSLRG------HWDWNWNLPYWPSPNSSWIPAFLLTPTSTIWRLLG 866

Query: 220  KLDLSDCGLGEAAIPS-DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
            KL L   GL E A  S D   L SL+EL L+ NNF +LP+ I  L  L  L +++C+ L 
Sbjct: 867  KLKLG-YGLSERATNSVDFGGLSSLEELDLSGNNFFSLPSGIGILSKLRLLTVQECRNLV 925

Query: 279  SLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYL 338
            S+P++P NL+ + A GC S+        LC   Y          +L  +    S   ++ 
Sbjct: 926  SIPELPSNLEHLDAFGCQSM-----QWALCYGGY-------GYHILFNHCYTFSHRDKF- 972

Query: 339  ELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV---F 395
                              + IP WF Y  +G+S++   P     +  VVG A  C+   F
Sbjct: 973  ------------------TMIPNWFSYSGKGTSLSFHIPPVFQGL--VVGVACQCLLGHF 1012

Query: 396  QVPK-----HSTGTYLFHS 409
            +  K      S G  LF +
Sbjct: 1013 ETAKLGIKNKSNGIQLFEA 1031



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 18/169 (10%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           LE L L+GC +L  +   I   K L +L +SGCS+L+K P+ +  +E  ++L  DG +  
Sbjct: 753 LEKLLLEGCSSLVEIHQCIGHSKSLVSLNISGCSQLQKLPECMGDIECFTELLADGINNE 812

Query: 90  EVPSSIELLPGLELLYL----NECKNLVRLPSSING------LKSLKTL-NLSGCCKL-- 136
           +  SS+E L  +  L L    +   NL   PS  +       L    T+  L G  KL  
Sbjct: 813 QFLSSVEHLRCVRKLSLRGHWDWNWNLPYWPSPNSSWIPAFLLTPTSTIWRLLGKLKLGY 872

Query: 137 ---ENVPDTL--GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
              E   +++  G + SLEELD+SG       S I ++  LR L    C
Sbjct: 873 GLSERATNSVDFGGLSSLEELDLSGNNFFSLPSGIGILSKLRLLTVQEC 921



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 21/155 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKG------------CKNLSSLPV-- 46
           M  ++  ++L  DG +  +  SS+E L  +  L+L+G              N S +P   
Sbjct: 795 MGDIECFTELLADGINNEQFLSSVEHLRCVRKLSLRGHWDWNWNLPYWPSPNSSWIPAFL 854

Query: 47  ---TISSLKCLRTLELS-GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
              T +  + L  L+L  G S+          +  L +L L G +   +PS I +L  L 
Sbjct: 855 LTPTSTIWRLLGKLKLGYGLSERATNSVDFGGLSSLEELDLSGNNFFSLPSGIGILSKLR 914

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
           LL + EC+NLV +P   + L+ L      GC  ++
Sbjct: 915 LLTVQECRNLVSIPELPSNLEHLDAF---GCQSMQ 946


>gi|358345441|ref|XP_003636786.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355502721|gb|AES83924.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 510

 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 200/455 (43%), Gaps = 71/455 (15%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           LRTL+LS    L+K P     + +L ++  +G   + ++  SI +L  L  L L +CK L
Sbjct: 77  LRTLDLSHSKSLRKMPNF-GEVPNLERVSFEGCVKLVQMGPSIGVLRKLVYLNLKDCKKL 135

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
           + +P +I GL SL+ LNLSGC K+   P  L K     +   S +  +  TSSI     +
Sbjct: 136 IIIPKNIFGLSSLECLNLSGCSKVFKNPRQLRK----HDSSESSSHFQSTTSSILKWTRI 191

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
                            H H  +    K      L   SL  +  L  LD+S CG+ +  
Sbjct: 192 -----------------HFHSLYPYAHKDIASRFLH--SLLSLSCLNDLDISFCGISQ-- 230

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +P+ I  L  L+ L L  NNFVT+P S+  L  L  L L+ CK L+SLPQ+P    F  A
Sbjct: 231 LPNAIGRLRWLERLNLGGNNFVTVP-SLRKLSRLAYLNLQHCKLLKSLPQLP----FATA 285

Query: 293 NGCSSLVTLFGALKLCRSK-YTIINCIDSLKLLRKNGLAISMLREYLEL--QAVSDPGHK 349
                 +      K  +SK   I NC    +    N +  S + + +    Q+ SD    
Sbjct: 286 IEHDLHINNLDKNKSWKSKGLVIFNCPKLGERECWNSMIFSWMIQLIRANPQSSSD---V 342

Query: 350 LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYN--VNKVVGFAICCVFQVPKHSTGTYLF 407
           + IV PGS+IP WF  Q+   S+++     +++   N  +G A C VF V   S  T  +
Sbjct: 343 IQIVTPGSEIPSWFNNQSNSRSLSIALSPVMHDDTDNNFIGIACCAVFSV---SPTTTTY 399

Query: 408 HSYPAHELECSMDGSGEGHY----IYFRGKFGHVVSDHLWLLFLPRHGHNWQFES--NLI 461
              PA  +  S   +    Y    +        V SDH+ L++ P        ES  N++
Sbjct: 400 AKTPAIGINFSNRNTRRRWYGIISVSLERYLIEVKSDHMCLIYFP-------LESFFNIL 452

Query: 462 RL---------SFR---SISDPTW---KVKRCGFH 481
           +          +FR   SI +P     KV+ CG+H
Sbjct: 453 KFIDETLENLDNFRMKFSIMNPKGLHTKVQSCGYH 487



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L    ++++L +    L  L TL+LS     R+ P      + L  +  EG   +
Sbjct: 54  LVELILR-YSSVKQLWKDKKYLPNLRTLDLSHSKSLRKMPNFGEVPN-LERVSFEGCVKL 111

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             +  SI +L   +  NLKDCK L  +P  I GL SL  +  SGCSK+
Sbjct: 112 VQMGPSIGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKV 159



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 2/140 (1%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + ++  SI +L  L  L LK CK L  +P  I  L  L  L LSGCSK+ K P+ +   +
Sbjct: 111 LVQMGPSIGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKVFKNPRQLRKHD 170

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
                    ++ + +     +      LY    K++           S         C +
Sbjct: 171 SSESSSHFQSTTSSILKWTRI--HFHSLYPYAHKDIASRFLHSLLSLSCLNDLDISFCGI 228

Query: 137 ENVPDTLGKVESLEELDVSG 156
             +P+ +G++  LE L++ G
Sbjct: 229 SQLPNAIGRLRWLERLNLGG 248


>gi|15242334|ref|NP_199333.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007833|gb|AED95216.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1261

 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 100/162 (61%), Gaps = 6/162 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  + L  + L+G T +  +P  ++ +  L  L L+GC +L SLP    +L  LRTL L
Sbjct: 681 LSRAQKLQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDI--TLVGLRTLIL 738

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S CS+ K+F  I  ++E+L   YLDGT+I E+PS+I  L  L  L L +CKNL+ LP SI
Sbjct: 739 SNCSRFKEFKLIAKNLEEL---YLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSI 795

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
             LK+++ + LSGC  LE+ P+    ++ L+ L + GTAI++
Sbjct: 796 GNLKAIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKK 837



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 201/465 (43%), Gaps = 87/465 (18%)

Query: 101  LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD-TLGKV------------- 146
            L+ + L  C  L  LP  +  ++SL  LNL GC  LE++PD TL  +             
Sbjct: 687  LQSINLEGCTGLKTLPQVLQNMESLMFLNLRGCTSLESLPDITLVGLRTLILSNCSRFKE 746

Query: 147  -----ESLEELDVSGTAIRR-PTS-----------------------SIFLMKNLRSLYF 177
                 ++LEEL + GTAI+  P++                       SI  +K ++ +  
Sbjct: 747  FKLIAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIIL 806

Query: 178  SGCN--EPPASASWHL-HLPFNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
            SGC+  E     + +L HL   LL G +   +  +L  L+    LT    S+C L E   
Sbjct: 807  SGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIPDILHHLSPDQGLTS-SQSNCHLCEW-- 863

Query: 234  PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
            P  I  L S++ L L+ N F  LP SI  L +L  L+L+ CK L S+P +PPNLQ++ A+
Sbjct: 864  PRGIYGLSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAH 923

Query: 294  GCSSLVT-------LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ----A 342
            GC SL T       L    +   S +   NC    K + +N +  S  R+ ++L     A
Sbjct: 924  GCISLETISILSDPLLAETEHLHSTFIFTNCTKLYK-VEENSIE-SYPRKKIQLMSNALA 981

Query: 343  VSDPGHKLSIV----FPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP 398
              + G  L ++    FPG Q+P WF ++  G  +    P + +N   + G A+C V    
Sbjct: 982  RYEKGLALDVLIGICFPGWQVPGWFNHRTVGLELKQNLPRH-WNAGGLAGIALCAVVSFK 1040

Query: 399  KH----------STGTYLFHSYPAHELECSMDGSGE-GHYIYFRGKFGHVVSDHL-WLLF 446
             +           +G +        +  C + G  E G Y     K  HV   +  WL F
Sbjct: 1041 DYISKNNRLLVTCSGEFKKEDKTLFQFSCILGGWTEHGSYEAREIKSDHVFIGYTSWLNF 1100

Query: 447  LPRHGHNWQFESNLIRLSFRSISDPTWKVK-----RCGFHPIYMH 486
            + +   +    +    L F+ ++D T +V      +CGF  IY H
Sbjct: 1101 M-KSDDSIGCVATEASLRFQ-VTDGTREVTNCTVVKCGFSLIYSH 1143



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 116/248 (46%), Gaps = 39/248 (15%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K+L +LYLDGT+I E+PS+I  L  L  L LK CKNL SLP +I +LK ++ + LSGCS 
Sbjct: 752 KNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSS 811

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK-------------- 110
           L+ FP++  +++ L  L LDGT+I ++P  +  L   + L  ++                
Sbjct: 812 LESFPEVNQNLKHLKTLLLDGTAIKKIPDILHHLSPDQGLTSSQSNCHLCEWPRGIYGLS 871

Query: 111 ---------NLVR-LPSSINGLKSLKTLNLSGCCKLENVP---------DTLGKVESLEE 151
                    N  R LP SI  L  L  L+L  C  L +VP         D  G + SLE 
Sbjct: 872 SVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCI-SLET 930

Query: 152 LDVSGTAIRRPTS---SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
           + +    +   T    S F+  N   LY    N   +     + L  N L +    +AL 
Sbjct: 931 ISILSDPLLAETEHLHSTFIFTNCTKLYKVEENSIESYPRKKIQLMSNALARYEKGLALD 990

Query: 209 LPSLTGVC 216
           +  L G+C
Sbjct: 991 V--LIGIC 996



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L   ++ +  L+ L L GC +LE LP     L  L TL LS  S+F+EF  I  +
Sbjct: 696 TGLKTLPQVLQNMESLMFLNLRGCTSLESLPDI--TLVGLRTLILSNCSRFKEFKLIAKN 753

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L E++L+GTAI+ LP++I  L   I   LKDCKNL SLP +I  L++++ +  SGCS
Sbjct: 754 ---LEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCS 810

Query: 788 KLKNVTETLGKVESLEVRL 806
            L++  E    ++ L+  L
Sbjct: 811 SLESFPEVNQNLKHLKTLL 829



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 57/107 (53%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           NCSR  E      ++ ++  DGT I+EL   I  L  L+ L L  CKNL  LP +I  LK
Sbjct: 740 NCSRFKEFKLIAKNLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLK 799

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
            +  + LSG S    FPE+  +   L  + L+GTAI+ +P  +  LS
Sbjct: 800 AIQEIILSGCSSLESFPEVNQNLKHLKTLLLDGTAIKKIPDILHHLS 846


>gi|357458903|ref|XP_003599732.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|357474669|ref|XP_003607619.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355488780|gb|AES69983.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355508674|gb|AES89816.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1058

 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 198/453 (43%), Gaps = 67/453 (14%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            LRTL+LS    L+K P     + +L ++  +G   + ++  SI +L  L  L L +CK L
Sbjct: 625  LRTLDLSHSKSLRKMPNF-GEVPNLERVSFEGCVKLVQMGPSIGVLRKLVYLNLKDCKKL 683

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
            + +P +I GL SL+ LNLSGC K+   P  L K     +   S +  +  TSSI     +
Sbjct: 684  IIIPKNIFGLSSLECLNLSGCSKVFKNPRQLRK----HDSSESSSHFQSTTSSILKWTRI 739

Query: 173  RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
                             H H  +    K      L   SL  +  L  LD+S CG+ +  
Sbjct: 740  -----------------HFHSLYPYAHKDIASRFLH--SLLSLSCLNDLDISFCGISQ-- 778

Query: 233  IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            +P+ I  L  L+ L L  NNFVT+P S+  L  L  L L+ CK L+SLPQ+P    F  A
Sbjct: 779  LPNAIGRLRWLERLNLGGNNFVTVP-SLRKLSRLAYLNLQHCKLLKSLPQLP----FATA 833

Query: 293  NGCSSLVTLFGALKLCRSK-YTIINCIDSLKLLRKNGLAISMLREYLEL--QAVSDPGHK 349
                  +      K  +SK   I NC    +    N +  S + + +    Q+ SD    
Sbjct: 834  IEHDLHINNLDKNKSWKSKGLVIFNCPKLGERECWNSMIFSWMIQLIRANPQSSSDV--- 890

Query: 350  LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYN--VNKVVGFAICCVFQVPKHSTGTYLF 407
            + IV PGS+IP WF  Q+   S+++     +++   N  +G A C VF V   S  T  +
Sbjct: 891  IQIVTPGSEIPSWFNNQSNSRSLSIALSPVMHDDTDNNFIGIACCAVFSV---SPTTTTY 947

Query: 408  HSYPAHELECSMDGSGEGHY----IYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRL 463
               PA  +  S   +    Y    +        V SDH+ L++ P          N+++ 
Sbjct: 948  AKTPAIGINFSNRNTRRRWYGIISVSLERYLIEVKSDHMCLIYFPLESF-----FNILKF 1002

Query: 464  ---------SFR---SISDPTW---KVKRCGFH 481
                     +FR   SI +P     KV+ CG+H
Sbjct: 1003 IDETLENLDNFRMKFSIMNPKGLHTKVQSCGYH 1035



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L L    ++++L +    L  L TL+LS     R+ P      + L  +  EG   +
Sbjct: 602 LVELILR-YSSVKQLWKDKKYLPNLRTLDLSHSKSLRKMPNFGEVPN-LERVSFEGCVKL 659

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             +  SI +L   +  NLKDCK L  +P  I GL SL  +  SGCSK+
Sbjct: 660 VQMGPSIGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKV 707



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 2/143 (1%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
             + ++  SI +L  L  L LK CK L  +P  I  L  L  L LSGCSK+ K P+ +  
Sbjct: 657 VKLVQMGPSIGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKVFKNPRQLRK 716

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            +         ++ + +     +      LY    K++           S         C
Sbjct: 717 HDSSESSSHFQSTTSSILKWTRI--HFHSLYPYAHKDIASRFLHSLLSLSCLNDLDISFC 774

Query: 135 KLENVPDTLGKVESLEELDVSGT 157
            +  +P+ +G++  LE L++ G 
Sbjct: 775 GISQLPNAIGRLRWLERLNLGGN 797


>gi|168030408|ref|XP_001767715.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681035|gb|EDQ67466.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 539

 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 169/337 (50%), Gaps = 40/337 (11%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M ++K L  L L G  S+  +P S+  L  L  L L  C++L +LP ++ +L  L  L L
Sbjct: 169 MGNLKSLVQLNLIGCGSLEALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNL 228

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C  LK FP+ + ++  L +L L+G  S+  +P S+  L  L  LY+ EC++L  LP S
Sbjct: 229 SRCGSLKAFPESMGNLNSLVQLDLEGCESLEALPESMGNLNSLVGLYVIECRSLKALPES 288

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYF 177
           +  L SL  LNLS C  L+ +P+++G + SL +L++ G  +++    S+  + +L  L  
Sbjct: 289 MGNLNSLVQLNLSRCGSLKALPESMGNLNSLVKLNLIGCGSLKALLESMGNLNSLVELDL 348

Query: 178 SGCNE----PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAA 232
             C      P +  + +  +  NL   S C     LP S+  + SL +LDL  C   EA 
Sbjct: 349 GECGSLKALPESMGNLNSLVQLNL---SKCGSLKALPESMGNLNSLVELDLGGCESLEA- 404

Query: 233 IPSDIDNLHSLKELYL--------------NRN-----NFV------TLPASISGLLNLE 267
           +P  + NL+SL +LYL              N N     N +      TLP S+  L +L 
Sbjct: 405 LPESMSNLNSLVKLYLYGCGSLKALPKSMGNLNSLKVLNLIGCGSLKTLPESMGNLNSLV 464

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           EL L +C  L+ LP+   NL F++     GC SL  L
Sbjct: 465 ELYLGECGSLKVLPESMGNLNFLKKLNLYGCGSLEAL 501



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 156/301 (51%), Gaps = 13/301 (4%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M ++  L  L L+G  S+  +P S+  L  L  L +  C++L +LP ++ +L  L  L L
Sbjct: 241 MGNLNSLVQLDLEGCESLEALPESMGNLNSLVGLYVIECRSLKALPESMGNLNSLVQLNL 300

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C  LK  P+ + ++  L KL L G  S+  +  S+  L  L  L L EC +L  LP S
Sbjct: 301 SRCGSLKALPESMGNLNSLVKLNLIGCGSLKALLESMGNLNSLVELDLGECGSLKALPES 360

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYF 177
           +  L SL  LNLS C  L+ +P+++G + SL ELD+ G  ++     S+  + +L  LY 
Sbjct: 361 MGNLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESLEALPESMSNLNSLVKLYL 420

Query: 178 SGCNE----PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAA 232
            GC      P +  + +     NL+G   C     LP S+  + SL +L L +CG     
Sbjct: 421 YGCGSLKALPKSMGNLNSLKVLNLIG---CGSLKTLPESMGNLNSLVELYLGECG-SLKV 476

Query: 233 IPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           +P  + NL+ LK+L L    +   LP S+  L +L EL+L  CK L++LP+   NL+ ++
Sbjct: 477 LPESMGNLNFLKKLNLYGCGSLEALPKSMGNLNSLVELDLRGCKTLEALPESIGNLKNLK 536

Query: 292 A 292
            
Sbjct: 537 V 537



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 157/320 (49%), Gaps = 37/320 (11%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P S+  L  L  L L  C +L +LP ++ +   L  L L GC  LK  P+ + ++
Sbjct: 113 SLKALPESMSNLNSLVKLNLYECGSLKTLPESMGNWNSLVELFLYGCGFLKALPESMGNL 172

Query: 76  EDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           + L +L L G  S+  +P S+  L  L  L L EC++L  LP S+  L SL  LNLS C 
Sbjct: 173 KSLVQLNLIGCGSLEALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCG 232

Query: 135 KLENVPDTLGKVESLEELDVSGT-------------------------AIRRPTSSIFLM 169
            L+  P+++G + SL +LD+ G                          +++    S+  +
Sbjct: 233 SLKAFPESMGNLNSLVQLDLEGCESLEALPESMGNLNSLVGLYVIECRSLKALPESMGNL 292

Query: 170 KNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD 225
            +L  L  S C      P +  + +  +  NL+G  S  +  +L S+  + SL +LDL +
Sbjct: 293 NSLVQLNLSRCGSLKALPESMGNLNSLVKLNLIGCGS--LKALLESMGNLNSLVELDLGE 350

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
           CG    A+P  + NL+SL +L L++  +   LP S+  L +L EL+L  C+ L++LP+  
Sbjct: 351 CG-SLKALPESMGNLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESLEALPESM 409

Query: 285 PNLQFVRA---NGCSSLVTL 301
            NL  +      GC SL  L
Sbjct: 410 SNLNSLVKLYLYGCGSLKAL 429



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 150/294 (51%), Gaps = 31/294 (10%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M ++  L +L L +  S+  +P S+  L  L  L L  C +L +LP ++ +L  L  L L
Sbjct: 1   MGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVQLNL 60

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C  LK  P+ + ++  L +L L G  S+  +P S+  L  L  L LN C++L  LP S
Sbjct: 61  SRCGSLKALPESMGNLNSLVELDLGGCESLEALPESMGNLNSLLKLDLNVCRSLKALPES 120

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNLRSLY 176
           ++ L SL  LNL  C  L+ +P+++G   SL EL + G    +  P S    M NL+SL 
Sbjct: 121 MSNLNSLVKLNLYECGSLKTLPESMGNWNSLVELFLYGCGFLKALPES----MGNLKSL- 175

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPS 235
                           +  NL+G   C     LP S+  + SL +LDL +C     A+P 
Sbjct: 176 ----------------VQLNLIG---CGSLEALPESMGNLNSLVELDLGECR-SLKALPE 215

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            + NL+SL +L L+R  +    P S+  L +L +L+LE C+ L++LP+   NL 
Sbjct: 216 SMGNLNSLVQLNLSRCGSLKAFPESMGNLNSLVQLDLEGCESLEALPESMGNLN 269



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 29/293 (9%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P S+  L  L  L L GC++L +LP ++ +L  L  L+L+ C  LK  P+ ++++
Sbjct: 65  SLKALPESMGNLNSLVELDLGGCESLEALPESMGNLNSLLKLDLNVCRSLKALPESMSNL 124

Query: 76  EDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L KL L +  S+  +P S+     L  L+L  C  L  LP S+  LKSL  LNL GC 
Sbjct: 125 NSLVKLNLYECGSLKTLPESMGNWNSLVELFLYGCGFLKALPESMGNLKSLVQLNLIGCG 184

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            LE +P+++G + SL ELD+               ++L++L       P +  + +  + 
Sbjct: 185 SLEALPESMGNLNSLVELDLGEC------------RSLKAL-------PESMGNLNSLVQ 225

Query: 195 FNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY-LNRNN 252
            NL   S C      P S+  + SL +LDL  C   E A+P  + NL+SL  LY +   +
Sbjct: 226 LNL---SRCGSLKAFPESMGNLNSLVQLDLEGCESLE-ALPESMGNLNSLVGLYVIECRS 281

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRAN--GCSSLVTLF 302
              LP S+  L +L +L L  C  L++LP+   NL   V+ N  GC SL  L 
Sbjct: 282 LKALPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVKLNLIGCGSLKALL 334



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           LV+L L  C +L+ LP ++  L  L  LNLS     +  PE   + + L+E+ L G  ++
Sbjct: 343 LVELDLGECGSLKALPESMGNLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESL 402

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP S+  L+  +   L  C +LK+LP ++  L SL+++   GC  LK + E++G + S
Sbjct: 403 EALPESMSNLNSLVKLYLYGCGSLKALPKSMGNLNSLKVLNLIGCGSLKTLPESMGNLNS 462

Query: 802 L 802
           L
Sbjct: 463 L 463



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAI 741
           LV+L L GC  L+ LP ++  LK L  LNL G       PE   + + L+E+ L E  ++
Sbjct: 151 LVELFLYGCGFLKALPESMGNLKSLVQLNLIGCGSLEALPESMGNLNSLVELDLGECRSL 210

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP S+  L+  +  NL  C +LK+ P ++  L SL  +   GC  L+ + E++G + S
Sbjct: 211 KALPESMGNLNSLVQLNLSRCGSLKAFPESMGNLNSLVQLDLEGCESLEALPESMGNLNS 270

Query: 802 L 802
           L
Sbjct: 271 L 271



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 2/155 (1%)

Query: 650 LWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           L E       +VQ+ LS    ++ L  ++  L  LVQL L+ C +L+ LP ++  L  L 
Sbjct: 21  LPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLV 80

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKS 767
            L+L G       PE   + + LL++ L    +++ LP S+  L+  +  NL +C +LK+
Sbjct: 81  ELDLGGCESLEALPESMGNLNSLLKLDLNVCRSLKALPESMSNLNSLVKLNLYECGSLKT 140

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           LP ++    SL  ++  GC  LK + E++G ++SL
Sbjct: 141 LPESMGNWNSLVELFLYGCGFLKALPESMGNLKSL 175



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 5/125 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAI 741
           LV+L L GC +L+ LP+++  L  L  LNL G    +  PE   + + L+E++L E  ++
Sbjct: 415 LVKLYLYGCGSLKALPKSMGNLNSLKVLNLIGCGSLKTLPESMGNLNSLVELYLGECGSL 474

Query: 742 RGLPASIELLSGNILS--NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           + LP S+  L  N L   NL  C +L++LP ++  L SL  +   GC  L+ + E++G +
Sbjct: 475 KVLPESMGNL--NFLKKLNLYGCGSLEALPKSMGNLNSLVELDLRGCKTLEALPESIGNL 532

Query: 800 ESLEV 804
           ++L+V
Sbjct: 533 KNLKV 537



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 2/160 (1%)

Query: 645 GNCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           G+   L E       +V++ L +   ++ L  ++  L  LVQL L+ C +L+  P ++  
Sbjct: 184 GSLEALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKAFPESMGN 243

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIH-LEGTAIRGLPASIELLSGNILSNLKDC 762
           L  L  L+L G       PE   + + L+ ++ +E  +++ LP S+  L+  +  NL  C
Sbjct: 244 LNSLVQLDLEGCESLEALPESMGNLNSLVGLYVIECRSLKALPESMGNLNSLVQLNLSRC 303

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +LK+LP ++  L SL  +   GC  LK + E++G + SL
Sbjct: 304 GSLKALPESMGNLNSLVKLNLIGCGSLKALLESMGNLNSL 343



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAI 741
           LVQL L GC +LE LP ++  L  L  L+L      +  PE   + + L++++L    ++
Sbjct: 175 LVQLNLIGCGSLEALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSL 234

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           +  P S+  L+  +  +L+ C++L++LP ++  L SL  +Y   C  LK + E++G + S
Sbjct: 235 KAFPESMGNLNSLVQLDLEGCESLEALPESMGNLNSLVGLYVIECRSLKALPESMGNLNS 294

Query: 802 L 802
           L
Sbjct: 295 L 295



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 2/157 (1%)

Query: 650 LWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           L E       +VQ+ LS    ++ L  ++  L  LV+L L GC +L+ L  ++  L  L 
Sbjct: 285 LPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVKLNLIGCGSLKALLESMGNLNSLV 344

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            L+L      +  PE   + + L++++L +  +++ LP S+  L+  +  +L  C++L++
Sbjct: 345 ELDLGECGSLKALPESMGNLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESLEA 404

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           LP +++ L SL  +Y  GC  LK + +++G + SL+V
Sbjct: 405 LPESMSNLNSLVKLYLYGCGSLKALPKSMGNLNSLKV 441



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 2/162 (1%)

Query: 643 EPGNCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           E G+   L E       +VQ+ LS    ++ L  ++  L  LV+L L GC++LE LP ++
Sbjct: 350 ECGSLKALPESMGNLNSLVQLNLSKCGSLKALPESMGNLNSLVELDLGGCESLEALPESM 409

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLK 760
           S L  L  L L G    +  P+   + + L  ++L G  +++ LP S+  L+  +   L 
Sbjct: 410 SNLNSLVKLYLYGCGSLKALPKSMGNLNSLKVLNLIGCGSLKTLPESMGNLNSLVELYLG 469

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +C +LK LP ++  L  L+ +   GC  L+ + +++G + SL
Sbjct: 470 ECGSLKVLPESMGNLNFLKKLNLYGCGSLEALPKSMGNLNSL 511



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           LV+L L  C +L+ LP ++     L  L L G    +  PE   +   L++++L G  ++
Sbjct: 127 LVKLNLYECGSLKTLPESMGNWNSLVELFLYGCGFLKALPESMGNLKSLVQLNLIGCGSL 186

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP S+  L+  +  +L +C++LK+LP ++  L SL  +  S C  LK   E++G + S
Sbjct: 187 EALPESMGNLNSLVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKAFPESMGNLNS 246

Query: 802 L 802
           L
Sbjct: 247 L 247



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 2/128 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAI 741
           LV+L L  C++L+ LP ++  L  L  LNLS     +  PE   + + L++++L    ++
Sbjct: 7   LVELDLGECRSLKALPESMGNLNSLVQLNLSRCGSLKALPESMGNLNSLVQLNLSRCGSL 66

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP S+  L+  +  +L  C++L++LP ++  L SL  +  + C  LK + E++  + S
Sbjct: 67  KALPESMGNLNSLVELDLGGCESLEALPESMGNLNSLLKLDLNVCRSLKALPESMSNLNS 126

Query: 802 LEVRLSSW 809
           L V+L+ +
Sbjct: 127 L-VKLNLY 133


>gi|297790450|ref|XP_002863115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308939|gb|EFH39374.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 181/399 (45%), Gaps = 80/399 (20%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + ++ +L +L L   S + E+PSSI   T L+LL L GC +L  LP +I +L  L+ L L
Sbjct: 741  IGNLINLKELDLSSLSCLVELPSSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNL 800

Query: 60   SGCSKLKKFPQIVAS---MEDLS----------KLYLDGTSIAEV-PSSIELLPGLELLY 105
            S  S L + P  + +   +EDL+           L L G S  EV P++I+L   L  L 
Sbjct: 801  SSLSCLVELPFSIGNATNLEDLNLRQCSNLKLQTLNLRGCSKLEVLPANIKL-GSLRKLN 859

Query: 106  LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS 165
            L  C NLV+LP SI  L+ L+TL L GC KLE++P  + K+ESL  LD++   + +    
Sbjct: 860  LQHCSNLVKLPFSIGNLQKLQTLTLRGCSKLEDLPANI-KLESLCLLDLTDCLLLKRFPE 918

Query: 166  IFLMKNLRSLYFSGCN--EPPAS-ASW----HLHLPF--NLLGKSSCPVALMLPSLTGVC 216
            I    N+ +LY  G    E P+S  SW    +LH+ +  NL+                  
Sbjct: 919  I--STNVETLYLKGTTIEEVPSSIKSWSRLTYLHMSYSENLMN----------------- 959

Query: 217  SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
                             P   D    +  LY+       LP  +    +L EL L+ CK+
Sbjct: 960  ----------------FPHAFD---IITRLYVTNTEIQELPPWVKKFSHLRELILKGCKK 1000

Query: 277  LQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE 336
            L SLPQIP ++ ++ A  C SL  L              +C      +R N      L +
Sbjct: 1001 LVSLPQIPDSITYIDAEDCESLEKL--------------DCSFHDPEIRVNSAKCFKLNQ 1046

Query: 337  YLELQAVSDPGHKLSIVFPGSQIPKWFMYQNE-GSSITV 374
                  +  P    +I+ PG ++P +F +Q+  G S+T+
Sbjct: 1047 EARDLIIQTPTSNYAIL-PGREVPAYFTHQSATGGSLTI 1084



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 150/285 (52%), Gaps = 15/285 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L  L L G +S+ + PS+I     L  L L GC +L  L  +I +L  L+ L+L
Sbjct: 621 LSTATNLQKLNLSGCSSLVKPPSTIGYTKNLRKLYLGGCSSLVELSFSIGNLINLKELDL 680

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S  S L + P  + +  +L KL LD  +S+ E+PSSI  L  L+ L L+    +V LPSS
Sbjct: 681 SSLSCLVELPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINLKELDLSSLSCMVELPSS 740

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I  L +LK L+LS    L  +P ++G    L+ LD+ G +++     SI  + NL+ L  
Sbjct: 741 IGNLINLKELDLSSLSCLVELPSSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNL 800

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           S       S S  + LPF++ G ++    L L   + +  L  L+L  C   E  +P++I
Sbjct: 801 S-------SLSCLVELPFSI-GNATNLEDLNLRQCSNL-KLQTLNLRGCSKLEV-LPANI 850

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLP 281
             L SL++L L   +N V LP SI  L  L+ L L  C +L+ LP
Sbjct: 851 -KLGSLRKLNLQHCSNLVKLPFSIGNLQKLQTLTLRGCSKLEDLP 894



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 111/244 (45%), Gaps = 50/244 (20%)

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CSKL+K  + +  + +L ++ L  + + +    +     L+ L L+ C +LV+ PS+I  
Sbjct: 588 CSKLEKLWEGIKPLPNLKRMDLRSSLLLKELPDLSTATNLQKLNLSGCSSLVKPPSTIGY 647

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            K+L+ L L GC  L  +  ++G + +L+ELD+S                          
Sbjct: 648 TKNLRKLYLGGCSSLVELSFSIGNLINLKELDLS-------------------------- 681

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
               S S  + LPF               S+    +L KL+L  C      +PS I NL 
Sbjct: 682 ----SLSCLVELPF---------------SIGNATNLRKLNLDQCS-SLVELPSSIGNLI 721

Query: 242 SLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSS 297
           +LKEL L+  +  V LP+SI  L+NL+EL+L     L  LP    N   L  +   GCSS
Sbjct: 722 NLKELDLSSLSCMVELPSSIGNLINLKELDLSSLSCLVELPSSIGNATPLDLLDLGGCSS 781

Query: 298 LVTL 301
           LV L
Sbjct: 782 LVEL 785



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 16/130 (12%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP----EITSSRD----QLLEIHLE 737
           L L GC +L  LP +I  L  L  LNLS LS   E P      T+  D    Q   + L+
Sbjct: 774 LDLGGCSSLVELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLEDLNLRQCSNLKLQ 833

Query: 738 GTAIRG------LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
              +RG      LPA+I+L S   L NL+ C NL  LP +I  L+ L+ +   GCSKL++
Sbjct: 834 TLNLRGCSKLEVLPANIKLGSLRKL-NLQHCSNLVKLPFSIGNLQKLQTLTLRGCSKLED 892

Query: 792 VTETLGKVES 801
           +   + K+ES
Sbjct: 893 LPANI-KLES 901



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 9/166 (5%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLF------GLVQLTLNGCKNLERLP 698
           G CS L E +    +++ +     D+  LS  +EL F       L +L L+ C +L  LP
Sbjct: 657 GGCSSLVELSFSIGNLINL--KELDLSSLSCLVELPFSIGNATNLRKLNLDQCSSLVELP 714

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
            +I  L  L  L+LS LS   E P    +   L E+ L   + +  LP+SI   +   L 
Sbjct: 715 SSIGNLINLKELDLSSLSCMVELPSSIGNLINLKELDLSSLSCLVELPSSIGNATPLDLL 774

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +L  C +L  LP +I  L +L+++  S  S L  +  ++G   +LE
Sbjct: 775 DLGGCSSLVELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLE 820



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 9/138 (6%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           ELS +I  L  L +L L+    L  LP +I     L  LNL   S   E P    +   L
Sbjct: 664 ELSFSIGNLINLKELDLSSLSCLVELPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINL 723

Query: 732 LEIHLEG-TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            E+ L   + +  LP+SI    GN+++    +L     L  LPS+I     L ++   GC
Sbjct: 724 KELDLSSLSCMVELPSSI----GNLINLKELDLSSLSCLVELPSSIGNATPLDLLDLGGC 779

Query: 787 SKLKNVTETLGKVESLEV 804
           S L  +  ++G + +L+V
Sbjct: 780 SSLVELPFSIGNLINLKV 797



 Score = 39.3 bits (90), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           +++ +L  +I  L  L  LTL GC  LE LP  I  L+ L  L+L+     + FPEI+++
Sbjct: 864 SNLVKLPFSIGNLQKLQTLTLRGCSKLEDLPANIK-LESLCLLDLTDCLLLKRFPEISTN 922

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
            + L   +L+GT I  +P+SI+  S     ++   +NL + P   +
Sbjct: 923 VETL---YLKGTTIEEVPSSIKSWSRLTYLHMSYSENLMNFPHAFD 965


>gi|30681996|ref|NP_192939.2| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657684|gb|AEE83084.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1798

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 91/148 (61%), Gaps = 4/148 (2%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            L  L LKGC  L ++P ++  L+ L  L LSGCSKL  FP+I  ++++L   Y+ GT I 
Sbjct: 1307 LVFLNLKGCSKLENIP-SMVDLESLEVLNLSGCSKLGNFPEISPNVKEL---YMGGTMIQ 1362

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            E+PSSI+ L  LE L L   ++L  LP+SI  LK L+TLNLSGC  LE  PD+  +++ L
Sbjct: 1363 EIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCL 1422

Query: 150  EELDVSGTAIRRPTSSIFLMKNLRSLYF 177
              LD+S T I+   SSI  +  L  L F
Sbjct: 1423 RFLDLSRTDIKELPSSISYLTALDELLF 1450



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 6/158 (3%)

Query: 647  CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            CS+L    +  P++ ++   GT I+E+  +I+ L  L +L L   ++L+ LP +I  LK+
Sbjct: 1338 CSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH 1397

Query: 707  LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
            L TLNLSG      FP+ +     L  + L  T I+ LP+SI  L+   L  L    + +
Sbjct: 1398 LETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTA--LDELLFVDSRR 1455

Query: 767  SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            + P   N   +   + PS  SKL    E LG     EV
Sbjct: 1456 NSPVVTNPNANSTELMPSESSKL----EILGTPADNEV 1489



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 112/233 (48%), Gaps = 31/233 (13%)

Query: 46   VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELL 104
             T SSL+ L+ + LS   +L K P++ +S  +L  + L+G  S+  +  SI  L  L  L
Sbjct: 1252 TTNSSLEKLKKMRLSYSDQLTKIPRL-SSATNLEHIDLEGCNSLLSLSQSISYLKKLVFL 1310

Query: 105  YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
             L  C  L  +PS ++ L+SL+ LNLSGC KL N P+    V+   EL + GT I+   S
Sbjct: 1311 NLKGCSKLENIPSMVD-LESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIPS 1366

Query: 165  SIFLMKNLRSLYFSGCNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
            SI   KNL  L      +     S HL +LP                S+  +  L  L+L
Sbjct: 1367 SI---KNLVLL-----EKLDLENSRHLKNLP---------------TSIYKLKHLETLNL 1403

Query: 224  SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            S C +     P     +  L+ L L+R +   LP+SIS L  L+EL   D +R
Sbjct: 1404 SGC-ISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLFVDSRR 1455



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 28/122 (22%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            LV L L GC  LE +P  +  L+ L  LNLSG SK   FPEI+ +   + E+++ GT I 
Sbjct: 1307 LVFLNLKGCSKLENIPSMVD-LESLEVLNLSGCSKLGNFPEISPN---VKELYMGGTMI- 1361

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                                   + +PS+I  L  L  +       LKN+  ++ K++ L
Sbjct: 1362 -----------------------QEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHL 1398

Query: 803  EV 804
            E 
Sbjct: 1399 ET 1400



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 18/219 (8%)

Query: 92   PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC-------KLENVPDTLG 144
            P  +E LP    L   E   L  LP S N  ++L  LNL   C       K      T  
Sbjct: 1197 PQGLEYLPSKLRLLHWEYYPLSSLPKSFNP-ENLVELNLPSSCAKKLWKGKKARFCTTNS 1255

Query: 145  KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSC 203
             +E L+++ +S +        +    NL  +   GCN   + +    +L     L    C
Sbjct: 1256 SLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGC 1315

Query: 204  PVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
                 +PS+  + SL  L+LS C  LG    P    N+   KELY+       +P+SI  
Sbjct: 1316 SKLENIPSMVDLESLEVLNLSGCSKLGN--FPEISPNV---KELYMGGTMIQEIPSSIKN 1370

Query: 263  LLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSL 298
            L+ LE+L+LE+ + L++LP     L+ +     +GC SL
Sbjct: 1371 LVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISL 1409



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 26/143 (18%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNL-----------------------SGLSKFR 719
            L  + L GC +L  L ++IS LK L  LNL                       SG SK  
Sbjct: 1283 LEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCSKLG 1342

Query: 720  EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
             FPEI+ +   + E+++ GT I+ +P+SI+ L      +L++ ++LK+LP++I  L+ L 
Sbjct: 1343 NFPEISPN---VKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLE 1399

Query: 780  MMYPSGCSKLKNVTETLGKVESL 802
             +  SGC  L+   ++  +++ L
Sbjct: 1400 TLNLSGCISLERFPDSSRRMKCL 1422


>gi|93117597|gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Populus balsamifera]
          Length = 1116

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 135/253 (53%), Gaps = 7/253 (2%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L  L+ L  S    L K P + +S   L KL L+G +S+ EV  SI  L  L LL L  C
Sbjct: 660 LNKLKILNFSHSKHLIKTPNLHSS--SLEKLMLEGCSSLVEVHQSIGHLKSLVLLNLKGC 717

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
             +  LP SI  +KSL++LN+SGC +LE +P+ +G +ESL EL        +   SI  +
Sbjct: 718 WRIKILPESICDVKSLESLNISGCSQLEKLPERMGDIESLTELLADEIQNEQFLFSIGHL 777

Query: 170 KNLR--SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDC 226
           K++R  SL  S  N+   S++         +  S   V   LP S     S+ +L L++ 
Sbjct: 778 KHVRKLSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFLPTSFIDWRSVKRLKLANY 837

Query: 227 GLGEAAIPS-DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
           GL E+A        L SL+EL L+ N F++LP+ IS L  L+ L +++C  L S+ ++P 
Sbjct: 838 GLSESATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQHLRVQNCSNLVSISELPS 897

Query: 286 NLQFVRANGCSSL 298
           +L+ + A+ C S+
Sbjct: 898 SLEKLYADSCRSM 910



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 28/203 (13%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L+G +S+ EV  SI  L  L LL LKGC  +  LP +I  +K L +L +SGCS+L
Sbjct: 685 LEKLMLEGCSSLVEVHQSIGHLKSLVLLNLKGCWRIKILPESICDVKSLESLNISGCSQL 744

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL------------NECKNLV 113
           +K P+ +  +E L++L  D     +   SI  L  +  L L              C + +
Sbjct: 745 EKLPERMGDIESLTELLADEIQNEQFLFSIGHLKHVRKLSLRVSNFNQDSLSSTSCPSPI 804

Query: 114 R-------------LPSSINGLKSLKTLNLSGCCKLENVPDTL--GKVESLEELDVSGTA 158
                         LP+S    +S+K L L+     E+  + +  G + SL+EL++SG  
Sbjct: 805 STWISASVLRVQPFLPTSFIDWRSVKRLKLANYGLSESATNCVYFGGLSSLQELNLSGNK 864

Query: 159 IRRPTSSIFLMKNLRSLYFSGCN 181
                S I ++  L+ L    C+
Sbjct: 865 FLSLPSGISVLTKLQHLRVQNCS 887



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
           N++ L +    L  L  LN S      + P + SS   L ++ LEG +++  +  SI  L
Sbjct: 649 NIKELWKEKKILNKLKILNFSHSKHLIKTPNLHSS--SLEKLMLEGCSSLVEVHQSIGHL 706

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
              +L NLK C  +K LP +I  ++SL  +  SGCS+L+ + E +G +ESL
Sbjct: 707 KSLVLLNLKGCWRIKILPESICDVKSLESLNISGCSQLEKLPERMGDIESL 757



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 35/63 (55%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +I  L  LV L L GC  ++ LP +I  +K L +LN+SG S+  + PE     + L
Sbjct: 698 EVHQSIGHLKSLVLLNLKGCWRIKILPESICDVKSLESLNISGCSQLEKLPERMGDIESL 757

Query: 732 LEI 734
            E+
Sbjct: 758 TEL 760


>gi|342365839|gb|AEL30372.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1061

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 153/366 (41%), Gaps = 79/366 (21%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSI 88
           LE L L  C  L+ +  ++   K L  L L  C+ L+ FP  +  M  L +L L D  S 
Sbjct: 661 LETLDLSCCHCLTLIHPSLICHKSLLVLNLWECTSLETFPGKL-EMSSLKELNLCDCKSF 719

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
              P   E +  L  L   +   +  LP S+  L  L  L+L GC KL  +PD++ ++ES
Sbjct: 720 MSPPEFGECMTKLSRLSFQDMA-ISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELES 778

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
           L                                               +L  SSC     
Sbjct: 779 L----------------------------------------------RILRASSCSSLCD 792

Query: 209 LP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
           LP S++ +  L+ LDL DC L E + P D     SL +L L+ N+FV LP SI  L  L+
Sbjct: 793 LPHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLDLSGNHFVNLPISIHELPKLK 852

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-FGALKLCRSKYTIINCIDSLKLLRK 326
            L L  CKRLQSLP++P +++ ++A  C SL T  F  L    S +              
Sbjct: 853 CLSLNGCKRLQSLPELPSSIRELKAWCCDSLDTRSFNNLSKACSVFA------------- 899

Query: 327 NGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKV 386
                              PG  L +V PG+ IP WF+++ E + + V  P + +   + 
Sbjct: 900 --------------STSQGPGEVLQMVIPGTNIPSWFVHRQESNCLLVPFPHHCHPSER- 944

Query: 387 VGFAIC 392
           +G A+C
Sbjct: 945 LGIALC 950



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 3/149 (2%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  LS L     +I+E+P S+  L GL  L L+GCK L+ LP +I  L+ LR L  S CS
Sbjct: 729 MTKLSRLSFQDMAISELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCS 788

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPSSING 121
            L   P  V+ +  LS L L    + E   P      P L  L L+   + V LP SI+ 
Sbjct: 789 SLCDLPHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPSLTDLDLSG-NHFVNLPISIHE 847

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLE 150
           L  LK L+L+GC +L+++P+    +  L+
Sbjct: 848 LPKLKCLSLNGCKRLQSLPELPSSIRELK 876



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L  C +LE  P  +  +  L  LNL     F   PE      +L  +  +  AI 
Sbjct: 685 LLVLNLWECTSLETFPGKLE-MSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAIS 743

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP S+  L G    +L+ CK L  LP +I+ L SLR++  S CS L ++  ++  +  L
Sbjct: 744 ELPISLGCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSLCDLPHSVSVIPFL 803

Query: 803 EV 804
            +
Sbjct: 804 SI 805



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 66/169 (39%), Gaps = 42/169 (24%)

Query: 640 SPQEPGNC----SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLE 695
           SP E G C    SRL      F D+         I EL +++  L GL +L L GCK L 
Sbjct: 721 SPPEFGECMTKLSRL-----SFQDMA--------ISELPISLGCLVGLSELDLRGCKKLT 767

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPE---------ITSSRD----------------Q 730
            LP +I  L+ L  L  S  S   + P          I   RD                 
Sbjct: 768 CLPDSIHELESLRILRASSCSSLCDLPHSVSVIPFLSILDLRDCCLTEESFPCDFGQFPS 827

Query: 731 LLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
           L ++ L G     LP SI  L      +L  CK L+SLP   + +R L+
Sbjct: 828 LTDLDLSGNHFVNLPISIHELPKLKCLSLNGCKRLQSLPELPSSIRELK 876


>gi|186511687|ref|NP_001118968.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|29839687|sp|Q9SZ67.1|WRK19_ARATH RecName: Full=Probable WRKY transcription factor 19; AltName:
            Full=WRKY DNA-binding protein 19
 gi|4586107|emb|CAB40943.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7267903|emb|CAB78245.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332657685|gb|AEE83085.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1895

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 91/148 (61%), Gaps = 4/148 (2%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            L  L LKGC  L ++P ++  L+ L  L LSGCSKL  FP+I  ++++L   Y+ GT I 
Sbjct: 1307 LVFLNLKGCSKLENIP-SMVDLESLEVLNLSGCSKLGNFPEISPNVKEL---YMGGTMIQ 1362

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            E+PSSI+ L  LE L L   ++L  LP+SI  LK L+TLNLSGC  LE  PD+  +++ L
Sbjct: 1363 EIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCL 1422

Query: 150  EELDVSGTAIRRPTSSIFLMKNLRSLYF 177
              LD+S T I+   SSI  +  L  L F
Sbjct: 1423 RFLDLSRTDIKELPSSISYLTALDELLF 1450



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 6/158 (3%)

Query: 647  CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            CS+L    +  P++ ++   GT I+E+  +I+ L  L +L L   ++L+ LP +I  LK+
Sbjct: 1338 CSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH 1397

Query: 707  LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
            L TLNLSG      FP+ +     L  + L  T I+ LP+SI  L+   L  L    + +
Sbjct: 1398 LETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTA--LDELLFVDSRR 1455

Query: 767  SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            + P   N   +   + PS  SKL    E LG     EV
Sbjct: 1456 NSPVVTNPNANSTELMPSESSKL----EILGTPADNEV 1489



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 31/233 (13%)

Query: 46   VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELL 104
             T SSL+ L+ + LS   +L K P++ +S  +L  + L+G  S+  +  SI  L  L  L
Sbjct: 1252 TTNSSLEKLKKMRLSYSDQLTKIPRL-SSATNLEHIDLEGCNSLLSLSQSISYLKKLVFL 1310

Query: 105  YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
             L  C  L  +PS ++ L+SL+ LNLSGC KL N P+    V+   EL + GT I+   S
Sbjct: 1311 NLKGCSKLENIPSMVD-LESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIPS 1366

Query: 165  SIFLMKNLRSLYFSGCNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
            SI  +  L  L            S HL +LP                S+  +  L  L+L
Sbjct: 1367 SIKNLVLLEKLDLEN--------SRHLKNLP---------------TSIYKLKHLETLNL 1403

Query: 224  SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            S C +     P     +  L+ L L+R +   LP+SIS L  L+EL   D +R
Sbjct: 1404 SGC-ISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLFVDSRR 1455



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 28/122 (22%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            LV L L GC  LE +P  +  L+ L  LNLSG SK   FPEI+ +   + E+++ GT I 
Sbjct: 1307 LVFLNLKGCSKLENIPSMVD-LESLEVLNLSGCSKLGNFPEISPN---VKELYMGGTMI- 1361

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                                   + +PS+I  L  L  +       LKN+  ++ K++ L
Sbjct: 1362 -----------------------QEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHL 1398

Query: 803  EV 804
            E 
Sbjct: 1399 ET 1400



 Score = 42.7 bits (99), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 18/219 (8%)

Query: 92   PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC-------KLENVPDTLG 144
            P  +E LP    L   E   L  LP S N  ++L  LNL   C       K      T  
Sbjct: 1197 PQGLEYLPSKLRLLHWEYYPLSSLPKSFNP-ENLVELNLPSSCAKKLWKGKKARFCTTNS 1255

Query: 145  KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSC 203
             +E L+++ +S +        +    NL  +   GCN   + +    +L     L    C
Sbjct: 1256 SLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGC 1315

Query: 204  PVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
                 +PS+  + SL  L+LS C  LG    P    N+   KELY+       +P+SI  
Sbjct: 1316 SKLENIPSMVDLESLEVLNLSGCSKLGN--FPEISPNV---KELYMGGTMIQEIPSSIKN 1370

Query: 263  LLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSL 298
            L+ LE+L+LE+ + L++LP     L+ +     +GC SL
Sbjct: 1371 LVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISL 1409



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 26/143 (18%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNL-----------------------SGLSKFR 719
            L  + L GC +L  L ++IS LK L  LNL                       SG SK  
Sbjct: 1283 LEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCSKLG 1342

Query: 720  EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
             FPEI+ +   + E+++ GT I+ +P+SI+ L      +L++ ++LK+LP++I  L+ L 
Sbjct: 1343 NFPEISPN---VKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLE 1399

Query: 780  MMYPSGCSKLKNVTETLGKVESL 802
             +  SGC  L+   ++  +++ L
Sbjct: 1400 TLNLSGCISLERFPDSSRRMKCL 1422


>gi|238480299|ref|NP_001154222.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657686|gb|AEE83086.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1879

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 91/148 (61%), Gaps = 4/148 (2%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            L  L LKGC  L ++P ++  L+ L  L LSGCSKL  FP+I  ++++L   Y+ GT I 
Sbjct: 1307 LVFLNLKGCSKLENIP-SMVDLESLEVLNLSGCSKLGNFPEISPNVKEL---YMGGTMIQ 1362

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            E+PSSI+ L  LE L L   ++L  LP+SI  LK L+TLNLSGC  LE  PD+  +++ L
Sbjct: 1363 EIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCL 1422

Query: 150  EELDVSGTAIRRPTSSIFLMKNLRSLYF 177
              LD+S T I+   SSI  +  L  L F
Sbjct: 1423 RFLDLSRTDIKELPSSISYLTALDELLF 1450



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 6/158 (3%)

Query: 647  CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            CS+L    +  P++ ++   GT I+E+  +I+ L  L +L L   ++L+ LP +I  LK+
Sbjct: 1338 CSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKH 1397

Query: 707  LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
            L TLNLSG      FP+ +     L  + L  T I+ LP+SI  L+   L  L    + +
Sbjct: 1398 LETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTA--LDELLFVDSRR 1455

Query: 767  SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            + P   N   +   + PS  SKL    E LG     EV
Sbjct: 1456 NSPVVTNPNANSTELMPSESSKL----EILGTPADNEV 1489



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 31/233 (13%)

Query: 46   VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELL 104
             T SSL+ L+ + LS   +L K P++ +S  +L  + L+G  S+  +  SI  L  L  L
Sbjct: 1252 TTNSSLEKLKKMRLSYSDQLTKIPRL-SSATNLEHIDLEGCNSLLSLSQSISYLKKLVFL 1310

Query: 105  YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
             L  C  L  +PS ++ L+SL+ LNLSGC KL N P+    V+   EL + GT I+   S
Sbjct: 1311 NLKGCSKLENIPSMVD-LESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIPS 1366

Query: 165  SIFLMKNLRSLYFSGCNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
            SI  +  L  L            S HL +LP                S+  +  L  L+L
Sbjct: 1367 SIKNLVLLEKLDLEN--------SRHLKNLP---------------TSIYKLKHLETLNL 1403

Query: 224  SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            S C +     P     +  L+ L L+R +   LP+SIS L  L+EL   D +R
Sbjct: 1404 SGC-ISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLFVDSRR 1455



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 28/122 (22%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            LV L L GC  LE +P  +  L+ L  LNLSG SK   FPEI+ +   + E+++ GT I 
Sbjct: 1307 LVFLNLKGCSKLENIPSMVD-LESLEVLNLSGCSKLGNFPEISPN---VKELYMGGTMI- 1361

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                                   + +PS+I  L  L  +       LKN+  ++ K++ L
Sbjct: 1362 -----------------------QEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHL 1398

Query: 803  EV 804
            E 
Sbjct: 1399 ET 1400



 Score = 42.7 bits (99), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 18/219 (8%)

Query: 92   PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC-------KLENVPDTLG 144
            P  +E LP    L   E   L  LP S N  ++L  LNL   C       K      T  
Sbjct: 1197 PQGLEYLPSKLRLLHWEYYPLSSLPKSFNP-ENLVELNLPSSCAKKLWKGKKARFCTTNS 1255

Query: 145  KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSC 203
             +E L+++ +S +        +    NL  +   GCN   + +    +L     L    C
Sbjct: 1256 SLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGC 1315

Query: 204  PVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
                 +PS+  + SL  L+LS C  LG    P    N+   KELY+       +P+SI  
Sbjct: 1316 SKLENIPSMVDLESLEVLNLSGCSKLGN--FPEISPNV---KELYMGGTMIQEIPSSIKN 1370

Query: 263  LLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSL 298
            L+ LE+L+LE+ + L++LP     L+ +     +GC SL
Sbjct: 1371 LVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISL 1409



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 26/143 (18%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNL-----------------------SGLSKFR 719
            L  + L GC +L  L ++IS LK L  LNL                       SG SK  
Sbjct: 1283 LEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCSKLG 1342

Query: 720  EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
             FPEI+ +   + E+++ GT I+ +P+SI+ L      +L++ ++LK+LP++I  L+ L 
Sbjct: 1343 NFPEISPN---VKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLE 1399

Query: 780  MMYPSGCSKLKNVTETLGKVESL 802
             +  SGC  L+   ++  +++ L
Sbjct: 1400 TLNLSGCISLERFPDSSRRMKCL 1422


>gi|297791241|ref|XP_002863505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309340|gb|EFH39764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1137

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 213/504 (42%), Gaps = 118/504 (23%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            L+ L L+GC  L +LP  +  +K L  L L GC+ L+  P++  ++  L  L L G +S 
Sbjct: 645  LQRLNLEGCTTLKTLPHDMHKMKVLSFLNLKGCTSLEFLPEM--NLVSLKTLTLSGCSSF 702

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             + P    +   +E LYL+  + + +LP+++  L+SL  LN+  C  LE +P  + ++++
Sbjct: 703  KDFPL---ISDNIETLYLDGTE-ISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKA 758

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L+EL +S           F +KN   +  S  N               LL  ++  V   
Sbjct: 759  LQELILS---------DCFNLKNFPEINMSSLN-------------ILLLDGTAVEVMPQ 796

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
            LPS+                               + L L+RN  ++ LP  IS L  L+
Sbjct: 797  LPSV-------------------------------QYLSLSRNTKISCLPIGISHLSQLK 825

Query: 268  ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINCIDSL 321
             L L+ C +L S+P+ PPNLQ + A+GCS L T+   L          S +   NC  +L
Sbjct: 826  WLNLKYCTKLTSVPEFPPNLQCLDAHGCSLLKTVSKPLARIMPTEQNHSTFIFTNC-QNL 884

Query: 322  KLLRKNGLA---------ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSI 372
            +   K  +          +S  R+      VS+     S  FPG ++P WF ++  GS +
Sbjct: 885  EQAAKEEITSYAQRKCQLLSYARKRYNGGLVSES--LFSTCFPGCEVPSWFCHETVGSEL 942

Query: 373  TVTRPSYLYNVNKVVGFAIC------------------CVFQVPKHSTGTYLF--HSYPA 412
             V    + ++  K+ G A+C                  C F+V   S   + F   S+  
Sbjct: 943  KVKLLPHWHD-KKLAGIALCAVVSCFEHQDQISRFSVTCTFKVEDKSWIPFTFPVGSWTR 1001

Query: 413  HELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFL--------PRHGHNWQFESNLIRLS 464
            HE     DG    H      +   + SDH+++ +         P  G++ +  S    L+
Sbjct: 1002 HE-----DGKVTRH----EDEKDKIESDHVFIGYTSYPHTIKCPEDGNSDKCNSTQASLN 1052

Query: 465  FR-SISDPTWKVKRCGFHPIYMHE 487
            F  + ++   KV +CGF  +Y  +
Sbjct: 1053 FTITGANEKLKVLQCGFSLVYARD 1076



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 8/154 (5%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L+G T++  +P  +  +  L  L LKGC +L  LP    +L  L+TL LSGCS  
Sbjct: 645 LQRLNLEGCTTLKTLPHDMHKMKVLSFLNLKGCTSLEFLPEM--NLVSLKTLTLSGCSSF 702

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K FP I  ++E    LYLDGT I+++P+++E L  L +L + +CK L  +P  +N LK+L
Sbjct: 703 KDFPLISDNIE---TLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKAL 759

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
           + L LS C  L+N P+    + SL  L + GTA+
Sbjct: 760 QELILSDCFNLKNFPEI--NMSSLNILLLDGTAV 791



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 14/187 (7%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  LYLDGT I+++P+++E L  L +L +K CK L  +P  ++ LK L+ L LS C  L
Sbjct: 711 NIETLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKALQELILSDCFNL 770

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K FP+I  +M  L+ L LDGT++  +P     LP ++ L L+    +  LP  I+ L  L
Sbjct: 771 KNFPEI--NMSSLNILLLDGTAVEVMPQ----LPSVQYLSLSRNTKISCLPIGISHLSQL 824

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTA----IRRPTSSIF-LMKNLRSLYFSGC 180
           K LNL  C KL +VP+      +L+ LD  G +    + +P + I    +N  +  F+ C
Sbjct: 825 KWLNLKYCTKLTSVPEF---PPNLQCLDAHGCSLLKTVSKPLARIMPTEQNHSTFIFTNC 881

Query: 181 NEPPASA 187
                +A
Sbjct: 882 QNLEQAA 888



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GC +LE LP     L  L TL LSG S F++FP I+   D +  ++L+GT I  LP
Sbjct: 672 LNLKGCTSLEFLPEM--NLVSLKTLTLSGCSSFKDFPLIS---DNIETLYLDGTEISQLP 726

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            ++E L   ++ N+KDCK L+ +P  +N L++L+ +  S C  LKN  E
Sbjct: 727 TNMEKLQSLVVLNMKDCKMLEEIPGRVNELKALQELILSDCFNLKNFPE 775



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 91/203 (44%), Gaps = 33/203 (16%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           +FP    +I  +  DGT+I +L   +E L  LV L +  CK LE +P  ++ LK L  L 
Sbjct: 704 DFPLISDNIETLYLDGTEISQLPTNMEKLQSLVVLNMKDCKMLEEIPGRVNELKALQELI 763

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTA--------------------IRGLPASIELL 751
           LS     + FPEI  S   +L   L+GTA                    I  LP  I  L
Sbjct: 764 LSDCFNLKNFPEINMSSLNIL--LLDGTAVEVMPQLPSVQYLSLSRNTKISCLPIGISHL 821

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
           S     NLK C  L S+P     L+ L      GCS LK V++ L ++   E   S++  
Sbjct: 822 SQLKWLNLKYCTKLTSVPEFPPNLQCLD---AHGCSLLKTVSKPLARIMPTEQNHSTFIF 878

Query: 812 PKMQNDFDCVEQSAVETVTKLAK 834
              QN    +EQ+A E +T  A+
Sbjct: 879 TNCQN----LEQAAKEEITSYAQ 897


>gi|108738543|gb|ABG00804.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 157/335 (46%), Gaps = 43/335 (12%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG--- 61
           K    LYLD T++  +PSSI  L  L+ L L  C +LS +P +I+ LK L+ L ++G   
Sbjct: 194 KSXEKLYLDDTALXNLPSSIGDLKNLQDLHLXRCTSLSKIPDSINELKSLKKLFINGSAV 253

Query: 62  --------------------CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL 101
                               C  LK+ P  +  +  L +L L  T I  +P  I  L  +
Sbjct: 254 EELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFI 313

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIR 160
             L L  CK L  LP SI  + +L +LNL G   +E +P+  GK+E L EL +S    ++
Sbjct: 314 RELELRNCKFLKFLPKSIGDMDTLYSLNLEGS-NIEELPEEFGKLEKLVELRMSNCKMLK 372

Query: 161 RPTSSIFLMKNLRSLYF--SGCNEPPASAS--------WHLHLPF------NLLGKSSCP 204
           R   S   +K+L  LY   +  +E P S            L  P       N+ G S  P
Sbjct: 373 RLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEP 432

Query: 205 VALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGL 263
             + +P S + +  L +LD     +    IP D++ L  L +L L  N F +LP+S+  L
Sbjct: 433 RFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLEKLSCLMKLNLGNNYFHSLPSSLVKL 491

Query: 264 LNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            NL+EL L DC+ L+ LP +P  L+ +    C SL
Sbjct: 492 SNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 44/301 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+   +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPEXXGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGL-----------------------ELLYLNECKN 111
           M    +L L GT+I  +P SI  L  L                       E LYL++   
Sbjct: 147 MTXXXELLLXGTAIKNLPESINRLQNLXILSLRGXKXXELPLCXXXXKSXEKLYLDDTA- 205

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIF 167
           L  LPSSI  LK+L+ L+L  C  L  +PD++ +++SL++L ++G+A+     +P+S   
Sbjct: 206 LXNLPSSIGDLKNLQDLHLXRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS--- 262

Query: 168 LMKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL 221
               L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L
Sbjct: 263 ----LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIREL 316

Query: 222 DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           +L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP
Sbjct: 317 ELRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLP 375

Query: 282 Q 282
           +
Sbjct: 376 E 376



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +     E+ L GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPEXXGAMTXXXELLLXGTAIK 161

Query: 743 GLPASIELLSGNILSNLKDCKN----------------------LKSLPSTINGLRSLRM 780
            LP SI  L    + +L+  K                       L +LPS+I  L++L+ 
Sbjct: 162 NLPESINRLQNLXILSLRGXKXXELPLCXXXXKSXEKLYLDDTALXNLPSSIGDLKNLQD 221

Query: 781 MYPSGCSKLKNVTETLGKVESLE 803
           ++   C+ L  + +++ +++SL+
Sbjct: 222 LHLXRCTSLSKIPDSINELKSLK 244



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 54/249 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M  L  L L+G++I E+P                             L+ L  L +S
Sbjct: 331 IGDMDTLYSLNLEGSNIEELPEE------------------------FGKLEKLVELRMS 366

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL-------------- 106
            C  LK+ P+    ++ L +LY+  T ++E+P S   L  L +L +              
Sbjct: 367 NCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVP 426

Query: 107 --NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
             +E    V +P+S + L  L+ L+         +PD L K+  L +L++         S
Sbjct: 427 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPS 486

Query: 165 SIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSL 218
           S+  + NL+ L    C E    PP        LP  L  L  ++C     +  L+ +  L
Sbjct: 487 SLVKLSNLQELSLRDCRELKRLPP--------LPCKLEQLNLANCFSLESVSDLSELTIL 538

Query: 219 TKLDLSDCG 227
           T L+L++C 
Sbjct: 539 TDLNLTNCA 547


>gi|255556649|ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223541425|gb|EEF42975.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 178/431 (41%), Gaps = 109/431 (25%)

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG- 156
            LP LE L L +C NL+ L  SI  L+ L  L+L GC  ++ +P  +G +ESLE+L++ G 
Sbjct: 655  LPSLERLKLKDCVNLIDLDESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGC 714

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
            + + +    +  M++L+ LY                                        
Sbjct: 715  SKLDQLPEEMRKMQSLKVLYAD-------------------------------------- 736

Query: 217  SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
                   +DC L + AIP+D+  L SL+ L L  N   ++P SI+ L  L+ L L+ C R
Sbjct: 737  -------ADCNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTR 789

Query: 277  LQSLPQIPPNLQFVRANGCSSL--------------VTLFGALKLCRSKYTI-------- 314
            LQSLPQ+P +L+ ++A GC+SL              V LFG  +L   +           
Sbjct: 790  LQSLPQLPTSLEELKAEGCTSLERITNLPNLLSTLQVELFGCGQLVEVQGLFKLEPTINM 849

Query: 315  -INCIDSLKLLRKNGLAISMLREYLEL---------QAVSDPGHKLSIVFPGSQIPKWFM 364
             I  ++ L L   + L  S ++ +  +         Q + + G  +S    G+++P WF 
Sbjct: 850  DIEMMNGLGLHNFSTLGSSEMKMFSAIANREMRSPPQVLQECG-IVSFFLAGNEVPHWFD 908

Query: 365  YQNEGSSITVT-RPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAH-ELECSMDGS 422
            +++ GSS++ T  P   Y   K+ G  +C V+         Y  H+   +  +     G+
Sbjct: 909  HKSTGSSLSFTINPLSDY---KIRGLNLCTVY---ARDHEVYWLHAAGHYARMNNETKGT 962

Query: 423  GEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNL---------IRLSFRSISDPTW 473
               +   F         D LWL +       W+F             +R+ F       +
Sbjct: 963  NWSYSPTFYALPEDDDEDMLWLSY-------WKFGGEFEVGDKVNVSVRMPF------GY 1009

Query: 474  KVKRCGFHPIY 484
             VK CG   +Y
Sbjct: 1010 YVKECGIRIVY 1020



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 9/174 (5%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  ++ ++  SI  L  L +L L+GC+N+  LPV I  L+ L  L L GCSKL + P+ +
Sbjct: 665 DCVNLIDLDESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGCSKLDQLPEEM 724

Query: 73  ASMEDLSKLYLDGT---SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             M+ L  LY D     S   +P+ +  L  LE L L +   +  +P SIN L +L+ L 
Sbjct: 725 RKMQSLKVLYADADCNLSDVAIPNDLRCLRSLESLDL-KGNPIYSIPESINSLTTLQYLC 783

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE 182
           L  C +L+++P       SLEEL   G T++ R T+   L+  L+   F GC +
Sbjct: 784 LDKCTRLQSLPQL---PTSLEELKAEGCTSLERITNLPNLLSTLQVELF-GCGQ 833



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 29/169 (17%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D  ++ +L  +I  L  L+ L L GC+N++RLP  I  L+ L  LNL G SK  + PE
Sbjct: 663 LKDCVNLIDLDESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGCSKLDQLPE 722

Query: 724 ----------ITSSRD----------------QLLEIHLEGTAIRGLPASIELLSGNILS 757
                     + +  D                 L  + L+G  I  +P SI  L+     
Sbjct: 723 EMRKMQSLKVLYADADCNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESINSLTTLQYL 782

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
            L  C  L+SLP     L  L+     GC+ L+ +T     + +L+V L
Sbjct: 783 CLDKCTRLQSLPQLPTSLEELK---AEGCTSLERITNLPNLLSTLQVEL 828



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           ++ L  L L G  I  +P SI  LT L+ L L  C  L SLP   +SL+ L+     GC+
Sbjct: 753 LRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQSLPQLPTSLEELKA---EGCT 809

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
            L++   +   +  L         + EV    +L P + +
Sbjct: 810 SLERITNLPNLLSTLQVELFGCGQLVEVQGLFKLEPTINM 849


>gi|224101027|ref|XP_002334313.1| predicted protein [Populus trichocarpa]
 gi|222871050|gb|EEF08181.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 127/247 (51%), Gaps = 11/247 (4%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNL 112
           L+ L L+    L K P + +S   L KL L G  S+ EV  SIE L  L  L +  C  L
Sbjct: 45  LKILNLNHSQNLIKTPDLHSS--SLEKLILKGCLSLVEVHQSIENLTSLVFLNMKGCWRL 102

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP SI  LKSL+TLN+SGC +LE +P+ +G +ESL EL  +G    +  SSI  +K++
Sbjct: 103 KNLPESIGNLKSLETLNISGCSQLEKLPERMGDMESLTELLANGIENEQFLSSIGQLKHV 162

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           R L   G +  P S S        +L  +S    L+  S T   S+ +L+L + GL + A
Sbjct: 163 RRLSLCGYSSAPPSCSL-------ILAGASNLKRLLPTSFTEWISVKRLELFNGGLTDRA 215

Query: 233 IPS-DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
               D   L +L+ L L  N F ++P+ I  L  L+ L L  C+ + S+  +P +L    
Sbjct: 216 TNCVDFSGLSALEFLDLRGNKFSSVPSGIGFLPKLDVLFLHGCEHIVSILDLPSSLSCFS 275

Query: 292 ANGCSSL 298
           A  C SL
Sbjct: 276 APYCKSL 282



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 91/193 (47%), Gaps = 20/193 (10%)

Query: 7   LSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L  L L G  S+ EV  SIE LT L  L +KGC  L +LP +I +LK L TL +SGCS+L
Sbjct: 67  LEKLILKGCLSLVEVHQSIENLTSLVFLNMKGCWRLKNLPESIGNLKSLETLNISGCSQL 126

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL--------------LYLNECKN 111
           +K P+ +  ME L++L  +G    +  SSI  L  +                L L    N
Sbjct: 127 EKLPERMGDMESLTELLANGIENEQFLSSIGQLKHVRRLSLCGYSSAPPSCSLILAGASN 186

Query: 112 LVR-LPSSINGLKSLKTLNLSG---CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
           L R LP+S     S+K L L       +  N  D  G + +LE LD+ G       S I 
Sbjct: 187 LKRLLPTSFTEWISVKRLELFNGGLTDRATNCVDFSG-LSALEFLDLRGNKFSSVPSGIG 245

Query: 168 LMKNLRSLYFSGC 180
            +  L  L+  GC
Sbjct: 246 FLPKLDVLFLHGC 258



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 3/111 (2%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELL 751
           NL+ L +    L  L  LNL+      + P++ SS   L ++ L+G  ++  +  SIE L
Sbjct: 31  NLKELWKGKKILDKLKILNLNHSQNLIKTPDLHSS--SLEKLILKGCLSLVEVHQSIENL 88

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +  +  N+K C  LK+LP +I  L+SL  +  SGCS+L+ + E +G +ESL
Sbjct: 89  TSLVFLNMKGCWRLKNLPESIGNLKSLETLNISGCSQLEKLPERMGDMESL 139



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L     + E+  +IE L  LV L + GC  L+ LP +I  LK L TLN+SG S+  + P
Sbjct: 71  ILKGCLSLVEVHQSIENLTSLVFLNMKGCWRLKNLPESIGNLKSLETLNISGCSQLEKLP 130

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASI 748
           E     + L E+   G       +SI
Sbjct: 131 ERMGDMESLTELLANGIENEQFLSSI 156


>gi|168068751|ref|XP_001786193.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661952|gb|EDQ48993.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 548

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 148/292 (50%), Gaps = 29/292 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S+ DL DLY  G S+  +P SI  L  L  L L GC +L +LP +I +L  L  L+L+
Sbjct: 260 LNSLVDL-DLYTCG-SLKALPESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLN 317

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C  LK  P+ + ++  L KL L    S+  +P SI  L  L  L L  CK+L  LP SI
Sbjct: 318 ICRSLKALPKSIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESI 377

Query: 120 NGLKSLKTLNLSGCCKLENVPD-TLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
             L SL  LNL GC  LE +P+ ++G + SL EL++S   +++    SI  + +L     
Sbjct: 378 GNLNSLVKLNLYGCRSLEALPEKSIGNLNSLVELNLSACVSLKALPDSIGNLNSLEDFDL 437

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
             C    A       LP                S+  + SL KL+L DC   EA +P  I
Sbjct: 438 YTCGSLKA-------LP---------------ESIGNLNSLVKLNLGDCQSLEA-LPKSI 474

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            NL+SL +L L R  +   LP SI  L +L +L L DC+ L++LP+   NL 
Sbjct: 475 HNLNSLVDLDLFRCRSLKALPKSIGNLNSLVKLNLRDCQSLEALPESIDNLN 526



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 157/313 (50%), Gaps = 15/313 (4%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L  L L G  S+  +P SI+ L  L  L L  C++L +LP +I +L     L L
Sbjct: 161 IGNLNSLVKLNLYGCRSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIGNLNPFVELRL 220

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GC  LK  P+ + ++  L KL L D  S+  +P SI+ L  L  L L  C +L  LP S
Sbjct: 221 YGCGSLKALPESIGNLNLLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALPES 280

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYF 177
           I  L SL  LNL GC  L+ +P+++G + SL +LD++   +++    SI  + +L  L  
Sbjct: 281 IGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSLVKLNL 340

Query: 178 SGCNE----PPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAA 232
             C      P +  + +  +  +L     C     LP S+  + SL KL+L  C   EA 
Sbjct: 341 GVCQSLEALPESIGNLNSLVKLDL---RVCKSLKALPESIGNLNSLVKLNLYGCRSLEAL 397

Query: 233 IPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FV 290
               I NL+SL EL L+   +   LP SI  L +LE+ +L  C  L++LP+   NL   V
Sbjct: 398 PEKSIGNLNSLVELNLSACVSLKALPDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLV 457

Query: 291 RAN--GCSSLVTL 301
           + N   C SL  L
Sbjct: 458 KLNLGDCQSLEAL 470



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 152/332 (45%), Gaps = 17/332 (5%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+  +P SI+ L  L  L L  C++L +LP +I +L  L  L L GC   +   + +
Sbjct: 29  DCQSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIGNLNSLVKLNLYGCRSFEALQESI 88

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            ++  L  L L G  S+  +P SI  L  L    L  C +L  LP SI  L SL  LNL 
Sbjct: 89  GNLNSLVDLNLYGCVSLKALPESIGNLNSLVYFDLYTCGSLKALPESIGNLNSLVKLNLG 148

Query: 132 GCCK-LENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
             CK L+  P+++G + SL +L++ G  ++     SI  + +L  L    C    A    
Sbjct: 149 DFCKSLKAFPESIGNLNSLVKLNLYGCRSLEALPKSIDNLNSLVDLDLFRCRSLKALPES 208

Query: 190 HLHL-PFNLLGKSSCPVALMLPSLTGVCSLTKLDLS-DCGLGEAAIPSDIDNLHSLKELY 247
             +L PF  L    C     LP   G  +L       DC   E A+P  IDNL+SL +L 
Sbjct: 209 IGNLNPFVELRLYGCGSLKALPESIGNLNLLVKLNLRDCQSLE-ALPESIDNLNSLVDLD 267

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
           L    +   LP SI  L +L +L L  C  L++LP+   NL         SLV L   L 
Sbjct: 268 LYTCGSLKALPESIGNLNSLVKLNLYGCGSLKALPESIGNLN--------SLVDL--DLN 317

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYL 338
           +CRS   +   I +L  L K  L +    E L
Sbjct: 318 ICRSLKALPKSIGNLNSLVKLNLGVCQSLEAL 349



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 126/252 (50%), Gaps = 30/252 (11%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRL 115
           L+L+ C  LK  P+ + ++  L KL L D  S+  +P SI+ L  L  L L  C++L  L
Sbjct: 1   LDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSLVDLDLFRCRSLKAL 60

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRS 174
           P SI  L SL  LNL GC   E + +++G + SL +L++ G  +++    SI    NL S
Sbjct: 61  PESIGNLNSLVKLNLYGCRSFEALQESIGNLNSLVDLNLYGCVSLKALPESI---GNLNS 117

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAI 233
           L +           + L+         +C     LP S+  + SL KL+L D      A 
Sbjct: 118 LVY-----------FDLY---------TCGSLKALPESIGNLNSLVKLNLGDFCKSLKAF 157

Query: 234 PSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FV- 290
           P  I NL+SL +L L    +   LP SI  L +L +L+L  C+ L++LP+   NL  FV 
Sbjct: 158 PESIGNLNSLVKLNLYGCRSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIGNLNPFVE 217

Query: 291 -RANGCSSLVTL 301
            R  GC SL  L
Sbjct: 218 LRLYGCGSLKAL 229



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 3/157 (1%)

Query: 1   MASMKDLSDLYLDGT-SITEVP-SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLE 58
           + ++  L  L L G  S+  +P  SI  L  L  L L  C +L +LP +I +L  L   +
Sbjct: 377 IGNLNSLVKLNLYGCRSLEALPEKSIGNLNSLVELNLSACVSLKALPDSIGNLNSLEDFD 436

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
           L  C  LK  P+ + ++  L KL L D  S+  +P SI  L  L  L L  C++L  LP 
Sbjct: 437 LYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIHNLNSLVDLDLFRCRSLKALPK 496

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           SI  L SL  LNL  C  LE +P+++  + SL +LD+
Sbjct: 497 SIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDL 533



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 77/131 (58%), Gaps = 2/131 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  LV+L L GC++LE LP++I  L  L  L+L      +  PE   + +  +E+ L G 
Sbjct: 164 LNSLVKLNLYGCRSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIGNLNPFVELRLYGC 223

Query: 740 -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            +++ LP SI  L+  +  NL+DC++L++LP +I+ L SL  +    C  LK + E++G 
Sbjct: 224 GSLKALPESIGNLNLLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALPESIGN 283

Query: 799 VESLEVRLSSW 809
           + SL V+L+ +
Sbjct: 284 LNSL-VKLNLY 293



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 4/168 (2%)

Query: 645 GNCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           G+   L E       +V++ L D   +  L  +I+ L  LV L L  C++L+ LP +I  
Sbjct: 7   GSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIGN 66

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDC 762
           L  L  LNL G   F    E   + + L++++L G  +++ LP SI  L+  +  +L  C
Sbjct: 67  LNSLVKLNLYGCRSFEALQESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVYFDLYTC 126

Query: 763 KNLKSLPSTINGLRSL-RMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
            +LK+LP +I  L SL ++     C  LK   E++G + SL V+L+ +
Sbjct: 127 GSLKALPESIGNLNSLVKLNLGDFCKSLKAFPESIGNLNSL-VKLNLY 173



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 2/145 (1%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D   +  L  +I+ L  LV L L  C +L+ LP +I  L  L  LNL G    +  PE  
Sbjct: 246 DCQSLEALPESIDNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLYGCGSLKALPESI 305

Query: 726 SSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
            + + L+++ L    +++ LP SI  L+  +  NL  C++L++LP +I  L SL  +   
Sbjct: 306 GNLNSLVDLDLNICRSLKALPKSIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVKLDLR 365

Query: 785 GCSKLKNVTETLGKVESLEVRLSSW 809
            C  LK + E++G + SL V+L+ +
Sbjct: 366 VCKSLKALPESIGNLNSL-VKLNLY 389



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 2/136 (1%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV L LN C++L+ LP++I  L  L  LNL         PE   + +
Sbjct: 298 LKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSLVKLNLGVCQSLEALPESIGNLN 357

Query: 730 QLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKSLP-STINGLRSLRMMYPSGCS 787
            L+++ L    +++ LP SI  L+  +  NL  C++L++LP  +I  L SL  +  S C 
Sbjct: 358 SLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPEKSIGNLNSLVELNLSACV 417

Query: 788 KLKNVTETLGKVESLE 803
            LK + +++G + SLE
Sbjct: 418 SLKALPDSIGNLNSLE 433



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 2/135 (1%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLP-RTISALKYLSTLNLSGLSKFREFPEITSSR 728
           ++ L  +I  L  LV+L L GC++LE LP ++I  L  L  LNLS     +  P+   + 
Sbjct: 370 LKALPESIGNLNSLVKLNLYGCRSLEALPEKSIGNLNSLVELNLSACVSLKALPDSIGNL 429

Query: 729 DQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
           + L +  L    +++ LP SI  L+  +  NL DC++L++LP +I+ L SL  +    C 
Sbjct: 430 NSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIHNLNSLVDLDLFRCR 489

Query: 788 KLKNVTETLGKVESL 802
            LK + +++G + SL
Sbjct: 490 SLKALPKSIGNLNSL 504



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 4/163 (2%)

Query: 650 LWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           L E  D    +V + L     ++ L  +I  L  LV+L L GC +L+ LP +I  L  L 
Sbjct: 253 LPESIDNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLV 312

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            L+L+     +  P+   + + L++++L    ++  LP SI  L+  +  +L+ CK+LK+
Sbjct: 313 DLDLNICRSLKALPKSIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKA 372

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTE-TLGKVESL-EVRLSS 808
           LP +I  L SL  +   GC  L+ + E ++G + SL E+ LS+
Sbjct: 373 LPESIGNLNSLVKLNLYGCRSLEALPEKSIGNLNSLVELNLSA 415



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            S+  +P SI  L  LE   L  C +L +LP +I +L  L  L L  C  L+  P+ + +
Sbjct: 417 VSLKALPDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIHN 476

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L  L L    S+  +P SI  L  L  L L +C++L  LP SI+ L SL  L+L  C
Sbjct: 477 LNSLVDLDLFRCRSLKALPKSIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTC 536

Query: 134 CKLENVPDTLG 144
             L+ + +++G
Sbjct: 537 RSLKALLESIG 547



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 3/130 (2%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  LV L L GC +L+ LP +I  L  L   +L      +  PE   + + L++++L   
Sbjct: 91  LNSLVDLNLYGCVSLKALPESIGNLNSLVYFDLYTCGSLKALPESIGNLNSLVKLNLGDF 150

Query: 739 -TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             +++  P SI  L+  +  NL  C++L++LP +I+ L SL  +    C  LK + E++G
Sbjct: 151 CKSLKAFPESIGNLNSLVKLNLYGCRSLEALPKSIDNLNSLVDLDLFRCRSLKALPESIG 210

Query: 798 KVES-LEVRL 806
            +   +E+RL
Sbjct: 211 NLNPFVELRL 220



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGL 744
           L LN C +L+ LP +I  L  L  LNL         P+   + + L+++ L    +++ L
Sbjct: 1   LDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSLVDLDLFRCRSLKAL 60

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P SI  L+  +  NL  C++ ++L  +I  L SL  +   GC  LK + E++G + SL
Sbjct: 61  PESIGNLNSLVKLNLYGCRSFEALQESIGNLNSLVDLNLYGCVSLKALPESIGNLNSL 118



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 1/135 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS    ++ L  +I  L  L    L  C +L+ LP +I  L  L  LNL         P+
Sbjct: 413 LSACVSLKALPDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPK 472

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              + + L+++ L    +++ LP SI  L+  +  NL+DC++L++LP +I+ L SL  + 
Sbjct: 473 SIHNLNSLVDLDLFRCRSLKALPKSIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLD 532

Query: 783 PSGCSKLKNVTETLG 797
              C  LK + E++G
Sbjct: 533 LYTCRSLKALLESIG 547



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  LV+L L+ C +L+ LP +I  L  L   +L      +  PE   + + L++++L + 
Sbjct: 405 LNSLVELNLSACVSLKALPDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLNLGDC 464

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            ++  LP SI  L+  +  +L  C++LK+LP +I  L SL  +    C  L+ + E++  
Sbjct: 465 QSLEALPKSIHNLNSLVDLDLFRCRSLKALPKSIGNLNSLVKLNLRDCQSLEALPESIDN 524

Query: 799 VESL 802
           + SL
Sbjct: 525 LNSL 528


>gi|168041264|ref|XP_001773112.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675659|gb|EDQ62152.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 333

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 10/310 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + S+  L DL ++   S+T +P+ +  LT L  L +KGC +L+SLP  + +L  L TL +
Sbjct: 22  IGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMKGCSSLTSLPNELGNLTSLTTLNM 81

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS L   P  + ++  L+ L  +G S +  +P+    L  L  L +  C +L  LP+ 
Sbjct: 82  KGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFGNLTSLTTLNMTGCSSLTSLPNE 141

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYF 177
           ++ L SL TLN+S C  L ++P+ LG + SL  L++ G   +    + +  + +L SL  
Sbjct: 142 LDNLTSLTTLNISWCSSLTSLPNELGNLTSLTTLNMWGCFRLTSMPNELGNLTSLTSLNM 201

Query: 178 SGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
            GC+   +  +   +L     L    C   + LP+ L  + SLT L++S C     ++P+
Sbjct: 202 KGCSRLTSLPNELGNLTSLTTLNMEGCSSLISLPNELGNLTSLTTLNISWCS-SLRSLPN 260

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---FVR 291
           ++ NL SL  L ++  ++  +LP  +  L +L  L  E C  L SLP    NL     + 
Sbjct: 261 ELGNLTSLTILNISWCSSLTSLPNELGNLTSLFFLNTEGCSSLTSLPNELDNLTSLIILN 320

Query: 292 ANGCSSLVTL 301
             GCSSL +L
Sbjct: 321 MEGCSSLTSL 330



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 29/299 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L + G +S+T +P+ +  LT L  L +KGC +L+SLP  + +L  L TL  
Sbjct: 46  LGNLTSLTFLNMKGCSSLTSLPNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNT 105

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS+L   P    ++  L+ L + G +S+  +P+ ++ L  L  L ++ C +L  LP+ 
Sbjct: 106 EGCSRLTSLPNEFGNLTSLTTLNMTGCSSLTSLPNELDNLTSLTTLNISWCSSLTSLPNE 165

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY-- 176
           +  L SL TLN+ GC +L ++P+ LG + SL  L++ G +  R TS    + NL SL   
Sbjct: 166 LGNLTSLTTLNMWGCFRLTSMPNELGNLTSLTSLNMKGCS--RLTSLPNELGNLTSLTTL 223

Query: 177 -FSGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLPS-LTGVCSLTKLDLSDC 226
              GC       S  + LP  L        L  S C     LP+ L  + SLT L++S C
Sbjct: 224 NMEGC-------SSLISLPNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWC 276

Query: 227 GLGEAAIPSDIDNLHSLKELYLNR---NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
                ++P+++ NL SL   +LN    ++  +LP  +  L +L  L +E C  L SLP 
Sbjct: 277 S-SLTSLPNELGNLTSL--FFLNTEGCSSLTSLPNELDNLTSLIILNMEGCSSLTSLPN 332



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 17/312 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M S+K L+  Y +   +  +P+SI  L  L+ L ++ C++L+SLP  + +L  L  L + 
Sbjct: 1   MTSLKILNLQYCERLKL--LPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMK 58

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           GCS L   P  + ++  L+ L + G +S+  +P+ +  L  L  L    C  L  LP+  
Sbjct: 59  GCSSLTSLPNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEF 118

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFS 178
             L SL TLN++GC  L ++P+ L  + SL  L++S  +++    + +  + +L +L   
Sbjct: 119 GNLTSLTTLNMTGCSSLTSLPNELDNLTSLTTLNISWCSSLTSLPNELGNLTSLTTLNMW 178

Query: 179 GC----NEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAI 233
           GC    + P    +       N+ G   C     LP+ L  + SLT L++  C     ++
Sbjct: 179 GCFRLTSMPNELGNLTSLTSLNMKG---CSRLTSLPNELGNLTSLTTLNMEGCS-SLISL 234

Query: 234 PSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---F 289
           P+++ NL SL  L ++  ++  +LP  +  L +L  L +  C  L SLP    NL    F
Sbjct: 235 PNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWCSSLTSLPNELGNLTSLFF 294

Query: 290 VRANGCSSLVTL 301
           +   GCSSL +L
Sbjct: 295 LNTEGCSSLTSL 306



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 16/185 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CSRL    +EF ++  +    ++  + +  L   ++ L  L  
Sbjct: 91  PNELGNLTSLTTLNTEGCSRLTSLPNEFGNLTSLTTLNMTGCSSLTSLPNELDNLTSLTT 150

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGL 744
           L ++ C +L  LP  +  L  L+TLN+ G  +    P    +   L  ++++G + +  L
Sbjct: 151 LNISWCSSLTSLPNELGNLTSLTTLNMWGCFRLTSMPNELGNLTSLTSLNMKGCSRLTSL 210

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P  +  L+     N++ C +L SLP+ +  L SL  +  S CS L+++   LG + SL +
Sbjct: 211 PNELGNLTSLTTLNMEGCSSLISLPNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTI 270

Query: 805 RLSSW 809
              SW
Sbjct: 271 LNISW 275



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-G 738
           L  L  L + GC  L  LP  +  L  L+TLN+ G S     P    +   L  +++   
Sbjct: 193 LTSLTSLNMKGCSRLTSLPNELGNLTSLTTLNMEGCSSLISLPNELGNLTSLTTLNISWC 252

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++R LP  +  L+   + N+  C +L SLP+ +  L SL  +   GCS L ++   L  
Sbjct: 253 SSLRSLPNELGNLTSLTILNISWCSSLTSLPNELGNLTSLFFLNTEGCSSLTSLPNELDN 312

Query: 799 VESLEV 804
           + SL +
Sbjct: 313 LTSLII 318



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 1/141 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  L  L +  C++L  LP  +  L  L+ LN+ G S     P    +  
Sbjct: 15  LKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMKGCSSLTSLPNELGNLT 74

Query: 730 QLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L  ++++G +++  LP  +  L+     N + C  L SLP+    L SL  +  +GCS 
Sbjct: 75  SLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFGNLTSLTTLNMTGCSS 134

Query: 789 LKNVTETLGKVESLEVRLSSW 809
           L ++   L  + SL     SW
Sbjct: 135 LTSLPNELDNLTSLTTLNISW 155



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 16/168 (9%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTD--IRELSLAIEL--LFGLVQ 685
           P E GN           C RL    +E  ++  + S       R  SL  EL  L  L  
Sbjct: 163 PNELGNLTSLTTLNMWGCFRLTSMPNELGNLTSLTSLNMKGCSRLTSLPNELGNLTSLTT 222

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGL 744
           L + GC +L  LP  +  L  L+TLN+S  S  R  P    +   L  +++   +++  L
Sbjct: 223 LNMEGCSSLISLPNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWCSSLTSL 282

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           P  +  L+     N + C +L SLP+ ++ L SL ++   GCS L ++
Sbjct: 283 PNELGNLTSLFFLNTEGCSSLTSLPNELDNLTSLIILNMEGCSSLTSL 330



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 1/120 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           L L  C+ L+ LP +I +L  L  LN+         P    +   L  ++++G +++  L
Sbjct: 7   LNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTFLNMKGCSSLTSL 66

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P  +  L+     N+K C +L SLP+ +  L SL  +   GCS+L ++    G + SL  
Sbjct: 67  PNELGNLTSLTTLNMKGCSSLTSLPNELGNLTSLTTLNTEGCSRLTSLPNEFGNLTSLTT 126



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 19/162 (11%)

Query: 625 MSCYKKWGRQTVRRQS-PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTD--I 670
           ++    WG    R  S P E GN           CSRL    +E  ++  + +   +   
Sbjct: 172 LTTLNMWG--CFRLTSMPNELGNLTSLTSLNMKGCSRLTSLPNELGNLTSLTTLNMEGCS 229

Query: 671 RELSLAIEL--LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
             +SL  EL  L  L  L ++ C +L  LP  +  L  L+ LN+S  S     P    + 
Sbjct: 230 SLISLPNELGNLTSLTTLNISWCSSLRSLPNELGNLTSLTILNISWCSSLTSLPNELGNL 289

Query: 729 DQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
             L  ++ EG +++  LP  ++ L+  I+ N++ C +L SLP
Sbjct: 290 TSLFFLNTEGCSSLTSLPNELDNLTSLIILNMEGCSSLTSLP 331


>gi|317106744|dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]
          Length = 947

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 145/293 (49%), Gaps = 58/293 (19%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+ SS + L  LE L L  C N+ S+P +I S K +R ++LS C K+K+ P+I+ S
Sbjct: 661 TSLVELHSSTQHLKKLEFLALSCCVNVRSIPSSIGS-KVIRCVDLSYCLKVKRCPEIL-S 718

Query: 75  MEDLSKLYLDGTS-IAEVP--SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            + L  L L+G S + + P  ++ E+  G + L +  C+ L+ LPSSI   KSLK L LS
Sbjct: 719 WKFLKVLRLEGMSNLVKFPDIAATEISSGCDELSMVNCEKLLSLPSSICKWKSLKYLYLS 778

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSG--CNEPPASAS 188
            C KLE+ P+ L  + +L E+D++    ++R  +SI+ +K L SLY  G    E P+S  
Sbjct: 779 NCSKLESFPEILEPM-NLVEIDMNKCKNLKRLPNSIYNLKYLESLYLKGTAIEEIPSSIE 837

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
            HL          +C              LT LDLSDC                      
Sbjct: 838 -HL----------TC--------------LTVLDLSDC---------------------- 850

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
              N   LP+ I  L  L+ + L  C+ L+SLP +P +L  +    C  L T+
Sbjct: 851 --KNLERLPSGIDKLCQLQRMYLHSCESLRSLPDLPQSLLHLDVCSCKLLETI 901



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 99/180 (55%), Gaps = 29/180 (16%)

Query: 1   MASMKDLSDLYLDGTS-ITEVP--SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTL 57
           + S K L  L L+G S + + P  ++ E+ +G + L++  C+ L SLP +I   K L+ L
Sbjct: 716 ILSWKFLKVLRLEGMSNLVKFPDIAATEISSGCDELSMVNCEKLLSLPSSICKWKSLKYL 775

Query: 58  ELSGCSKLKKFPQIVASME----DLSK-------------------LYLDGTSIAEVPSS 94
            LS CSKL+ FP+I+  M     D++K                   LYL GT+I E+PSS
Sbjct: 776 YLSNCSKLESFPEILEPMNLVEIDMNKCKNLKRLPNSIYNLKYLESLYLKGTAIEEIPSS 835

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           IE L  L +L L++CKNL RLPS I+ L  L+ + L  C  L ++PD     +SL  LDV
Sbjct: 836 IEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCESLRSLPDL---PQSLLHLDV 892



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 45/150 (30%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
            NCS+L    + FP+I++ ++                 LV++ +N CKNL+RLP +I  L
Sbjct: 778 SNCSKL----ESFPEILEPMN-----------------LVEIDMNKCKNLKRLPNSIYNL 816

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           KYL +L                        +L+GTAI  +P+SIE L+   + +L DCKN
Sbjct: 817 KYLESL------------------------YLKGTAIEEIPSSIEHLTCLTVLDLSDCKN 852

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L+ LPS I+ L  L+ MY   C  L+++ +
Sbjct: 853 LERLPSGIDKLCQLQRMYLHSCESLRSLPD 882



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 5/143 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL  + + L  L  L L+ C N+  +P +I + K +  ++LS   K +  PEI S 
Sbjct: 661 TSLVELHSSTQHLKKLEFLALSCCVNVRSIPSSIGS-KVIRCVDLSYCLKVKRCPEILSW 719

Query: 728 RDQLLEIHLEGTA-IRGLP--ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
           +  L  + LEG + +   P  A+ E+ SG    ++ +C+ L SLPS+I   +SL+ +Y S
Sbjct: 720 K-FLKVLRLEGMSNLVKFPDIAATEISSGCDELSMVNCEKLLSLPSSICKWKSLKYLYLS 778

Query: 785 GCSKLKNVTETLGKVESLEVRLS 807
            CSKL++  E L  +  +E+ ++
Sbjct: 779 NCSKLESFPEILEPMNLVEIDMN 801



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 31/61 (50%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT I E+  +IE L  L  L L+ CKNLERLP  I  L  L  + L      R  P++  
Sbjct: 826 GTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCESLRSLPDLPQ 885

Query: 727 S 727
           S
Sbjct: 886 S 886


>gi|297816422|ref|XP_002876094.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297321932|gb|EFH52353.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1195

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 176/419 (42%), Gaps = 98/419 (23%)

Query: 29   GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSI 88
             L  L LKGC +L SLP    +L  L  L LS CS LK+F  I  +              
Sbjct: 677  SLVFLNLKGCTSLKSLPEI--NLVSLEILILSNCSNLKEFRVISQN-------------- 720

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
                        LE LYL+   ++  LP + N L+ L  LN+ GC KL+  PD L     
Sbjct: 721  ------------LETLYLDGT-SIKELPLNFNILQRLVILNMKGCTKLKEFPDCLDD--- 764

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
                                +K L+ L  S C++              L    +   ++M
Sbjct: 765  --------------------LKALKELILSDCSK--------------LQKFPAIRESIM 790

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
                  V  + +LD        A   ++I  + SL+ L  ++N+ ++ LP +IS L  L+
Sbjct: 791  ------VLEILRLD--------ATTITEIPMISSLQCLCFSKNDQISSLPDNISQLFQLK 836

Query: 268  ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL------KLCRSKYTIINCIDSL 321
             L+L+ CKRL S+P++PPNLQ + A+GC SL T+   L      +   S +   NC    
Sbjct: 837  WLDLKYCKRLTSIPKLPPNLQHLDAHGCCSLKTVSNPLACLTTTQQIYSTFIFSNCNKLE 896

Query: 322  KLLRKNGLAISMLREYLELQAV-----SDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTR 376
            +  ++   + +  +  L L A      SD     SI FPGS++P WF ++  G  + +  
Sbjct: 897  RSAKEEISSFAQRKCQLLLDAQKRCNGSDSEPLFSICFPGSELPSWFCHEAVGPVLELRM 956

Query: 377  PSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFG 435
            P + ++ N++   A+C V   PK       F      +LE       EG +I F    G
Sbjct: 957  PPH-WHENRLASVALCAVVSFPKSEEQINCFSVKCTFKLEVK-----EGSWIEFSFPVG 1009



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 12/188 (6%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  LYLDGTSI E+P +  +L  L +L +KGC  L   P  +  LK L+ L LS CSK
Sbjct: 719 QNLETLYLDGTSIKELPLNFNILQRLVILNMKGCTKLKEFPDCLDDLKALKELILSDCSK 778

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+KFP I  S+  L  L LD T+I E+P    ++  L+ L  ++   +  LP +I+ L  
Sbjct: 779 LQKFPAIRESIMVLEILRLDATTITEIP----MISSLQCLCFSKNDQISSLPDNISQLFQ 834

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLY-FSG 179
           LK L+L  C +L ++P       +L+ LD  G      +  P + +   + + S + FS 
Sbjct: 835 LKWLDLKYCKRLTSIPKL---PPNLQHLDAHGCCSLKTVSNPLACLTTTQQIYSTFIFSN 891

Query: 180 CNEPPASA 187
           CN+   SA
Sbjct: 892 CNKLERSA 899



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 37/223 (16%)

Query: 645 GNCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
            NCS L     EF  I Q L     DGT I+EL L   +L  LV L + GC  L+  P  
Sbjct: 706 SNCSNL----KEFRVISQNLETLYLDGTSIKELPLNFNILQRLVILNMKGCTKLKEFPDC 761

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA-------------S 747
           +  LK L  L LS  SK ++FP I  S   L  + L+ T I  +P               
Sbjct: 762 LDDLKALKELILSDCSKLQKFPAIRESIMVLEILRLDATTITEIPMISSLQCLCFSKNDQ 821

Query: 748 IELLSGNILS-------NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           I  L  NI         +LK CK L S+P     L+ L      GC  LK V+  L  + 
Sbjct: 822 ISSLPDNISQLFQLKWLDLKYCKRLTSIPKLPPNLQHLDA---HGCCSLKTVSNPLACLT 878

Query: 801 SLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLA--KAELLRDS 841
           + +   S++    + ++ + +E+SA E ++  A  K +LL D+
Sbjct: 879 TTQQIYSTF----IFSNCNKLERSAKEEISSFAQRKCQLLLDA 917



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           D+  LS A  L+F    L L GC +L+ LP     L  L  L LS  S  +EF  I+ + 
Sbjct: 668 DLSGLSKAQSLVF----LNLKGCTSLKSLPEI--NLVSLEILILSNCSNLKEFRVISQNL 721

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
           + L   +L+GT+I+ LP +  +L   ++ N+K C  LK  P  ++ L++L+ +  S CSK
Sbjct: 722 ETL---YLDGTSIKELPLNFNILQRLVILNMKGCTKLKEFPDCLDDLKALKELILSDCSK 778

Query: 789 LKNVTETLGKVESLEV 804
           L+        +  LE+
Sbjct: 779 LQKFPAIRESIMVLEI 794


>gi|336238978|gb|AEI27416.1| TIR_3 [Helianthus annuus]
          Length = 1111

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 132/296 (44%), Gaps = 40/296 (13%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           L  L++L L+  +NL   P     L CL  L L  C                        
Sbjct: 678 LPNLKILDLQNFRNLIKTP-DFEGLPCLERLILVCCE----------------------- 713

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+ E+  SI     L  + +  C  L R P  I+ +K L+TL+LS C +L+  PD    +
Sbjct: 714 SLEEIHPSIGYHKSLVFVDMRLCSALKRFPPIIH-MKKLETLDLSWCKELQQFPDIQSNM 772

Query: 147 ESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNE-PPASASWHLHLPFNLLGKSSC- 203
           +SL  LD+  T I   P S      NL S    GC +      ++HL      L  S C 
Sbjct: 773 DSLVTLDLCLTRIEIIPPSVGRFCTNLVSFSLHGCRKLKRIEGNFHLLKSLKDLNLSGCI 832

Query: 204 ---------PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID-NLHSLKELYLNRNNF 253
                     V+L LP       L KL+L  C LG+  IPSDI   L +L+ L L+ NNF
Sbjct: 833 GLQSFHHEGSVSLKLPRFPRF--LRKLNLHRCNLGDGDIPSDIFCKLLNLQVLDLSENNF 890

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
             LP+ +S +L L+ L L DC  L  LP +P ++  ++ANGC SL    G L  C+
Sbjct: 891 SRLPSDLSQILCLKLLNLSDCINLVELPDLPSSIAILKANGCDSLEIARGDLSYCK 946



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++M  L  L L  T I  +P S+    T L   +L GC+ L  +      LK L+ L LS
Sbjct: 770 SNMDSLVTLDLCLTRIEIIPPSVGRFCTNLVSFSLHGCRKLKRIEGNFHLLKSLKDLNLS 829

Query: 61  GCS-------------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL-LPGLELLYL 106
           GC              KL +FP+ +  +     L+       ++PS I   L  L++L L
Sbjct: 830 GCIGLQSFHHEGSVSLKLPRFPRFLRKL----NLHRCNLGDGDIPSDIFCKLLNLQVLDL 885

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
           +E  N  RLPS ++ +  LK LNLS C  L  +PD
Sbjct: 886 SE-NNFSRLPSDLSQILCLKLLNLSDCINLVELPD 919


>gi|298205187|emb|CBI17246.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 1/169 (0%)

Query: 21  PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-ASMEDLS 79
           PS +     ++ +T+K           I  L  L T+ L+ CS L++FP++  +SM+ LS
Sbjct: 260 PSDVYRAFTMKKVTVKLVNLFKLHKNIIQYLDSLETIYLNNCSNLEEFPEMKRSSMKALS 319

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            L+ DG++I E+PSSIE L GL+ LY+  CKNL  LPSSI  LKSL+ L + GC  L+  
Sbjct: 320 YLHFDGSAIKELPSSIEHLTGLKELYMKVCKNLRSLPSSICRLKSLRNLQVFGCSNLDTF 379

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
           P+ +  ++ LE LD+ GT I+   SS+  + N+   +     E P   S
Sbjct: 380 PEIMEDMKYLEFLDLRGTGIKELPSSMEHLHNIGEFHCKMLQEIPELPS 428



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 81/126 (64%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +SMK LS L+ DG++I E+PSSIE LTGL+ L +K CKNL SLP +I  LK LR L++ G
Sbjct: 313 SSMKALSYLHFDGSAIKELPSSIEHLTGLKELYMKVCKNLRSLPSSICRLKSLRNLQVFG 372

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           CS L  FP+I+  M+ L  L L GT I E+PSS+E L  +   +    + +  LPSS+  
Sbjct: 373 CSNLDTFPEIMEDMKYLEFLDLRGTGIKELPSSMEHLHNIGEFHCKMLQEIPELPSSLPE 432

Query: 122 LKSLKT 127
           + +  T
Sbjct: 433 IHAHDT 438



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 91/173 (52%), Gaps = 22/173 (12%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G   +R + P +PG  SRLW+ +D +            ++++++ +  LF L        
Sbjct: 239 GWNIIRSEFPDDPGKWSRLWDPSDVYRAFT--------MKKVTVKLVNLFKL-------H 283

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEIT-SSRDQLLEIHLEGTAIRGLPASIEL 750
           KN+      I  L  L T+ L+  S   EFPE+  SS   L  +H +G+AI+ LP+SIE 
Sbjct: 284 KNI------IQYLDSLETIYLNNCSNLEEFPEMKRSSMKALSYLHFDGSAIKELPSSIEH 337

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           L+G     +K CKNL+SLPS+I  L+SLR +   GCS L    E +  ++ LE
Sbjct: 338 LTGLKELYMKVCKNLRSLPSSICRLKSLRNLQVFGCSNLDTFPEIMEDMKYLE 390



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 146/387 (37%), Gaps = 57/387 (14%)

Query: 111 NLVRLPSSI-NGLKSLKTLNLSGCCKLENVPD-TLGKVESLEELDVSGTAIRRPTSSIFL 168
           NL +L  +I   L SL+T+ L+ C  LE  P+     +++L  L   G+AI+   SSI  
Sbjct: 278 NLFKLHKNIIQYLDSLETIYLNNCSNLEEFPEMKRSSMKALSYLHFDGSAIKELPSSIEH 337

Query: 169 MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           +  L+ LY   C    +  S                      S+  + SL  L +  C  
Sbjct: 338 LTGLKELYMKVCKNLRSLPS----------------------SICRLKSLRNLQVFGCS- 374

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
                P  ++++  L+ L L       LP+S+  L N+ E     CK LQ +P++P +L 
Sbjct: 375 NLDTFPEIMEDMKYLEFLDLRGTGIKELPSSMEHLHNIGEFH---CKMLQEIPELPSSLP 431

Query: 289 FVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH 348
            + A+     +    +  L  S         +  L  K G            + + +PG 
Sbjct: 432 EIHAHDTKLEMLSGPSSLLWSSLLKWFKPTSNEHLNCKKG------------KMIINPG- 478

Query: 349 KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
                     IP W ++Q+ GS + +  P   Y  N  +GFA   ++    H   +  F 
Sbjct: 479 -------NGGIPGWVLHQDIGSQLRIELPLNWYEDNHFLGFAFFSLYHKENHFEASCHFD 531

Query: 409 SYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHG--------HNWQFESNL 460
                + +  +D      +     +F    SD LW+   P++           W F +  
Sbjct: 532 LRLRGDPDEVVDDLSISSWCKCH-EFNGDASDELWVTLYPKNAIPNKYHRKQPWHFLAAF 590

Query: 461 IRLSFRSISDPTWKVKRCGFHPIYMHE 487
             ++  +       +KRCG   IY H+
Sbjct: 591 DFVTRINGQATHTNIKRCGVQLIYTHD 617


>gi|125525266|gb|EAY73380.1| hypothetical protein OsI_01261 [Oryza sativa Indica Group]
          Length = 1264

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 157/310 (50%), Gaps = 12/310 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L  L L  + I+ +P+ I  L  L+ L L  C NL+ LP+++ +L+ L  L LS
Sbjct: 563 VGKLKHLRYLDLSSSLISTLPNCISSLHNLQTLHLYNCINLNVLPMSVCALENLEILNLS 622

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+     P  +  +++L  L L   S +  +PSSI  L  L LL L  C NL  LP +I
Sbjct: 623 ACN-FHSLPDSIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGCGNLEILPDTI 681

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
             L++L  LNLS C  L+ +P  +G + +L  L++S  T +    +SI  +K+L  L  S
Sbjct: 682 CSLQNLHFLNLSRCGVLQALPKNIGNLSNLLHLNLSQCTDLESIPTSIGRIKSLHILDLS 741

Query: 179 GC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
            C   +E P S      L   +L   +  +AL + S + + +L  LDLS   L    +P 
Sbjct: 742 HCSSLSELPGSIGGLHELQILILSHHASSLALPV-STSHLPNLQTLDLS-WNLSLEELPE 799

Query: 236 DIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVR 291
            I NLHSLK L L +  +   LP SI+ L+ LE L    C+ L  LP       NL+ +R
Sbjct: 800 SIGNLHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDGMTRITNLKHLR 859

Query: 292 ANGCSSLVTL 301
            + C SL  L
Sbjct: 860 NDQCRSLKQL 869



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S++E+P SI  L  L++L L    +  +LPV+ S L  L+TL+LS    L++ P+ + +
Sbjct: 744 SSLSELPGSIGGLHELQILILSHHASSLALPVSTSHLPNLQTLDLSWNLSLEELPESIGN 803

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L  L L    S+ ++P SI  L  LE L    C+NL +LP  +  + +LK L    C
Sbjct: 804 LHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDGMTRITNLKHLRNDQC 863

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
             L+ +P+  G+   LE L  S   I    SSI  +K+L +L
Sbjct: 864 RSLKQLPNGFGRWTKLETL--SLLMIGDKHSSITELKDLNNL 903



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L L+ C  L  LP +I  L+ L  LNL G       P+   S   L  ++
Sbjct: 632 SIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGCGNLEILPDTICSLQNLHFLN 691

Query: 736 LEGTAI-RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L    + + LP +I  LS  +  NL  C +L+S+P++I  ++SL ++  S CS L  +  
Sbjct: 692 LSRCGVLQALPKNIGNLSNLLHLNLSQCTDLESIPTSIGRIKSLHILDLSHCSSLSELPG 751

Query: 795 TLGKVESLEV 804
           ++G +  L++
Sbjct: 752 SIGGLHELQI 761



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 1/136 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEI 734
           +I  L  L  L L GC NLE LP TI +L+ L  LNLS     +  P+ I +  + L   
Sbjct: 656 SIGTLQSLHLLNLKGCGNLEILPDTICSLQNLHFLNLSRCGVLQALPKNIGNLSNLLHLN 715

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             + T +  +P SI  +    + +L  C +L  LP +I GL  L+++  S  +    +  
Sbjct: 716 LSQCTDLESIPTSIGRIKSLHILDLSHCSSLSELPGSIGGLHELQILILSHHASSLALPV 775

Query: 795 TLGKVESLEVRLSSWN 810
           +   + +L+    SWN
Sbjct: 776 STSHLPNLQTLDLSWN 791



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+ I EL  ++  L  L  L L+    +  LP  IS+L  L TL+L         P    
Sbjct: 553 GSQIMELPQSVGKLKHLRYLDLSSSL-ISTLPNCISSLHNLQTLHLYNCINLNVLPMSVC 611

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           + + L  ++L       LP SI  L      NL  C  L +LPS+I  L+SL ++   GC
Sbjct: 612 ALENLEILNLSACNFHSLPDSIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGC 671

Query: 787 SKLKNVTETLGKVESLE 803
             L+ + +T+  +++L 
Sbjct: 672 GNLEILPDTICSLQNLH 688



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 31/136 (22%)

Query: 49   SSLKCLRTLELSGCSKLKKFPQIVASMEDLS--------------------------KLY 82
            S    L+T+  +GC KL+  P +  ++ DLS                          +L+
Sbjct: 1077 SMFPVLKTVTATGCPKLRPKPCLPDAITDLSISDSSEILSVRKMFGSSSSTSASLLRRLW 1136

Query: 83   LDGTSIAEVPSSIELL---PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            +  + ++   S  +LL   P LE L +  C+ L  L   I  L +L+ L +S C +L+ +
Sbjct: 1137 IRKSDVSS--SEWKLLQHRPKLEELTIEYCEMLRVLAEPIRYLTTLRKLKISNCTELDAL 1194

Query: 140  PDTLGKVESLEELDVS 155
            P+ +G + +LE L +S
Sbjct: 1195 PEWIGDLVALESLQIS 1210



 Score = 39.7 bits (91), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 67   KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            K  Q    +E+L+  Y +   +   P  I  L  L  L ++ C  L  LP  I  L +L+
Sbjct: 1148 KLLQHRPKLEELTIEYCEMLRVLAEP--IRYLTTLRKLKISNCTELDALPEWIGDLVALE 1205

Query: 127  TLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            +L +S C KL ++P  L  + +LEEL V+ 
Sbjct: 1206 SLQISCCPKLISIPKGLQHLTALEELTVTA 1235



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  +I  L  L  L L+   +   LP + S L  L TL+LS      E PE
Sbjct: 740 LSHCSSLSELPGSIGGLHELQILILSHHASSLALPVSTSHLPNLQTLDLSWNLSLEELPE 799

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  + L +  ++R LP SI  L      N   C+NL  LP  +  + +L+ + 
Sbjct: 800 SIGNLHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDGMTRITNLKHLR 859

Query: 783 PSGCSKLKNVTETLGKVESLE 803
              C  LK +    G+   LE
Sbjct: 860 NDQCRSLKQLPNGFGRWTKLE 880


>gi|115435772|ref|NP_001042644.1| Os01g0260500 [Oryza sativa Japonica Group]
 gi|9558523|dbj|BAB03441.1| NBS-LRR disease resistance protein -like [Oryza sativa Japonica
           Group]
 gi|113532175|dbj|BAF04558.1| Os01g0260500 [Oryza sativa Japonica Group]
 gi|125569799|gb|EAZ11314.1| hypothetical protein OsJ_01178 [Oryza sativa Japonica Group]
          Length = 1292

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 157/310 (50%), Gaps = 12/310 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L  L L  + I+ +P+ I  L  L+ L L  C NL+ LP+++ +L+ L  L LS
Sbjct: 591 VGKLKHLRYLDLSSSLISTLPNCISSLHNLQTLHLYNCINLNVLPMSVCALENLEILNLS 650

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+     P  +  +++L  L L   S +  +PSSI  L  L LL L  C NL  LP +I
Sbjct: 651 ACN-FHSLPDSIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGCGNLEILPDTI 709

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
             L++L  LNLS C  L+ +P  +G + +L  L++S  T +    +SI  +K+L  L  S
Sbjct: 710 CSLQNLHFLNLSRCGVLQALPKNIGNLSNLLHLNLSQCTDLESIPTSIGRIKSLHILDLS 769

Query: 179 GC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
            C   +E P S      L   +L   +  +AL + S + + +L  LDLS   L    +P 
Sbjct: 770 HCSSLSELPGSIGGLHELQILILSHHASSLALPV-STSHLPNLQTLDLS-WNLSLEELPE 827

Query: 236 DIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVR 291
            I NLHSLK L L +  +   LP SI+ L+ LE L    C+ L  LP       NL+ +R
Sbjct: 828 SIGNLHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDGMTRITNLKHLR 887

Query: 292 ANGCSSLVTL 301
            + C SL  L
Sbjct: 888 NDQCRSLKQL 897



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S++E+P SI  L  L++L L    +  +LPV+ S L  L+TL+LS    L++ P+ + +
Sbjct: 772 SSLSELPGSIGGLHELQILILSHHASSLALPVSTSHLPNLQTLDLSWNLSLEELPESIGN 831

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L  L L    S+ ++P SI  L  LE L    C+NL +LP  +  + +LK L    C
Sbjct: 832 LHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDGMTRITNLKHLRNDQC 891

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
             L+ +P+  G+   LE L  S   I    SSI  +K+L +L
Sbjct: 892 RSLKQLPNGFGRWTKLETL--SLLMIGDKHSSITELKDLNNL 931



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L L+ C  L  LP +I  L+ L  LNL G       P+   S   L  ++
Sbjct: 660 SIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGCGNLEILPDTICSLQNLHFLN 719

Query: 736 LEGTAI-RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L    + + LP +I  LS  +  NL  C +L+S+P++I  ++SL ++  S CS L  +  
Sbjct: 720 LSRCGVLQALPKNIGNLSNLLHLNLSQCTDLESIPTSIGRIKSLHILDLSHCSSLSELPG 779

Query: 795 TLGKVESLEV 804
           ++G +  L++
Sbjct: 780 SIGGLHELQI 789



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEI 734
           +I  L  L  L L GC NLE LP TI +L+ L  LNLS     +  P+ I +  + L   
Sbjct: 684 SIGTLQSLHLLNLKGCGNLEILPDTICSLQNLHFLNLSRCGVLQALPKNIGNLSNLLHLN 743

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM---YPSGCSKLKN 791
             + T +  +P SI  +    + +L  C +L  LP +I GL  L+++   + +    L  
Sbjct: 744 LSQCTDLESIPTSIGRIKSLHILDLSHCSSLSELPGSIGGLHELQILILSHHASSLALPV 803

Query: 792 VTETLGKVESLEVRLSSWN 810
            T  L  +++L++   SWN
Sbjct: 804 STSHLPNLQTLDL---SWN 819



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G+ I EL  ++  L  L  L L+    +  LP  IS+L  L TL+L         P    
Sbjct: 581 GSQIMELPQSVGKLKHLRYLDLSSSL-ISTLPNCISSLHNLQTLHLYNCINLNVLPMSVC 639

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           + + L  ++L       LP SI  L      NL  C  L +LPS+I  L+SL ++   GC
Sbjct: 640 ALENLEILNLSACNFHSLPDSIGHLQNLQDLNLSLCSFLVTLPSSIGTLQSLHLLNLKGC 699

Query: 787 SKLKNVTETLGKVESLE 803
             L+ + +T+  +++L 
Sbjct: 700 GNLEILPDTICSLQNLH 716



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 67   KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            K  Q    +E+L+  Y +   +   P  I  L  L  L ++ C  L  LP  I  L +L+
Sbjct: 1176 KLLQHRPKLEELTIEYCEMLRVLAEP--IRYLTTLRKLKISNCTELDALPEWIGDLVALE 1233

Query: 127  TLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            +L +S C KL ++P  L  + +LEEL V+ 
Sbjct: 1234 SLQISCCPKLVSIPKGLQHLTALEELTVTA 1263



 Score = 40.0 bits (92), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 31/136 (22%)

Query: 49   SSLKCLRTLELSGCSKLKKFPQIVASMEDLS--------------------------KLY 82
            S    L+T+  +GC KL+  P +  ++ DLS                          +L+
Sbjct: 1105 SMFPVLKTVTATGCPKLRPKPCLPDAITDLSISDSSEILSVRKMFGSSSSTSASLLRRLW 1164

Query: 83   LDGTSIAEVPSSIELL---PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            +  + ++   S  +LL   P LE L +  C+ L  L   I  L +L+ L +S C +L+ +
Sbjct: 1165 IRKSDVSS--SEWKLLQHRPKLEELTIEYCEMLRVLAEPIRYLTTLRKLKISNCTELDAL 1222

Query: 140  PDTLGKVESLEELDVS 155
            P+ +G + +LE L +S
Sbjct: 1223 PEWIGDLVALESLQIS 1238



 Score = 39.3 bits (90), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  +I  L  L  L L+   +   LP + S L  L TL+LS      E PE
Sbjct: 768 LSHCSSLSELPGSIGGLHELQILILSHHASSLALPVSTSHLPNLQTLDLSWNLSLEELPE 827

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  + L +  ++R LP SI  L      N   C+NL  LP  +  + +L+ + 
Sbjct: 828 SIGNLHSLKTLILFQCWSLRKLPESITNLMMLESLNFVGCENLAKLPDGMTRITNLKHLR 887

Query: 783 PSGCSKLKNVTETLGKVESLE 803
              C  LK +    G+   LE
Sbjct: 888 NDQCRSLKQLPNGFGRWTKLE 908


>gi|356573485|ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1134

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 155/374 (41%), Gaps = 86/374 (22%)

Query: 48   ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLELLYL 106
            ++    +R L L  C  L + P  V+ + +L KL +    ++  + SSI  L  L++L  
Sbjct: 692  LTKFMSMRVLNLDKCKCLTQIPD-VSGLPNLEKLSFQHCQNLTTIHSSIGFLYKLKILSA 750

Query: 107  NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
              C  LV  P     L SL+ LNLS C  LE+ P+ LGK+E++ EL    T+I+   SSI
Sbjct: 751  FGCTKLVSFPPI--KLTSLEKLNLSRCHSLESFPEILGKMENIRELQCEYTSIKELPSSI 808

Query: 167  FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL-------- 218
              +  L+ L  + C          + LP ++         +M+P LT +           
Sbjct: 809  HNLTRLQELQLANCGV--------VQLPSSI---------VMMPELTELIGWKWKGWQWL 851

Query: 219  ---------------TKLDL---SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASI 260
                           +K++L   SDC L +            +K+L L++NNF  LP  I
Sbjct: 852  KQEEGEEKFGSSIVSSKVELLWASDCNLYDDFFSIGFTRFAHVKDLNLSKNNFTMLPECI 911

Query: 261  SGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDS 320
                 L +L + DCK LQ +  IPP+L+   A  C SL +         S    +N    
Sbjct: 912  KEFQFLRKLNVNDCKHLQEIRGIPPSLKHFLATNCKSLTS--------SSTSMFLN---- 959

Query: 321  LKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYL 380
                                Q + + G K     PG +IP+WF +Q+ G SI+       
Sbjct: 960  --------------------QELHETG-KTQFYLPGERIPEWFDHQSRGPSIS------F 992

Query: 381  YNVNKVVGFAICCV 394
            +  NK  G  +C V
Sbjct: 993  WFRNKFPGKVLCLV 1006



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 3/113 (2%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++T + SSI  L  L++L+  GC  L S P     L  L  L LS C  L+ FP+I+  M
Sbjct: 731 NLTTIHSSIGFLYKLKILSAFGCTKLVSFPPI--KLTSLEKLNLSRCHSLESFPEILGKM 788

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           E++ +L  + TSI E+PSSI  L  L+ L L  C  +V+LPSSI  +  L  L
Sbjct: 789 ENIRELQCEYTSIKELPSSIHNLTRLQELQLANC-GVVQLPSSIVMMPELTEL 840



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 47/199 (23%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSL---------------- 675
           GR+ VR++SP++PG  SRLW       DI+QVL D T   E+ +                
Sbjct: 564 GREIVRQESPKDPGKRSRLWFHE----DIIQVLEDNTGTSEIEIICLNFPLLDKEDIVEW 619

Query: 676 ---AIELLFGLVQLTLNG---CKNLERLPRTISALKYLSTLNLSGLSKFR-------EFP 722
              A + +  L  L +     CK    LP ++  L++    +    S FR       + P
Sbjct: 620 NRKAFKKMKNLKTLIIKSGHFCKGPRYLPNSLRVLEWWRYPSHDLPSDFRSKKLGICKLP 679

Query: 723 EITSSRDQLLEIHLEGTAIRGLP-------ASIELLSGNILSNL-----KDCKNLKSLPS 770
               +  +L+    +  ++R L          I  +SG  L NL     + C+NL ++ S
Sbjct: 680 HCCFTSLELVGFLTKFMSMRVLNLDKCKCLTQIPDVSG--LPNLEKLSFQHCQNLTTIHS 737

Query: 771 TINGLRSLRMMYPSGCSKL 789
           +I  L  L+++   GC+KL
Sbjct: 738 SIGFLYKLKILSAFGCTKL 756



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L+ L  L+  GC  L   P     L  L  LNLS       FPEI    + + E+ 
Sbjct: 738 SIGFLYKLKILSAFGCTKLVSFPPI--KLTSLEKLNLSRCHSLESFPEILGKMENIRELQ 795

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
            E T+I+ LP+SI  L+      L +C  +  LPS+I
Sbjct: 796 CEYTSIKELPSSIHNLTRLQELQLANC-GVVQLPSSI 831


>gi|242086464|ref|XP_002443657.1| hypothetical protein SORBIDRAFT_08g022995 [Sorghum bicolor]
 gi|241944350|gb|EES17495.1| hypothetical protein SORBIDRAFT_08g022995 [Sorghum bicolor]
          Length = 1143

 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 156/317 (49%), Gaps = 26/317 (8%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + S+  L  L + G+S I+ +P S++ L  L  L L    NLSSLP +   L  L  L L
Sbjct: 419 VTSLSKLMYLNISGSSKISTLPDSVKALRSLLHLDLSDSCNLSSLPESFGDLANLSHLNL 478

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           + CS LK  P+ V  +  L  L L G  +++ +P S   L  L  L L  C  L  LP S
Sbjct: 479 ANCSLLKALPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNLTNCSLLKALPES 538

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT-SSIFLMKNLRSLYF 177
           +N L+SL  L+LSGCC L ++P++ G + +L +L+++   +      S+  +++L  L  
Sbjct: 539 VNKLRSLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPDSVDKLRDLFCLDL 598

Query: 178 SG----CNEPPASASW----HLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGL 228
           SG    C+ P +S       HL+L       ++C +   LP S+  + SL  LDLS C  
Sbjct: 599 SGCCNLCSLPESSGDMMNLSHLYL-------ANCSLLKTLPESVHKLKSLRHLDLSGCT- 650

Query: 229 GEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIP--- 284
              ++P    +L +L  L L +  +  +LP S   L  L+ L L DC RL     I    
Sbjct: 651 SLCSLPECFGDLINLSHLNLAKCTDLCSLPKSFGRLFELQYLNLSDCLRLDLWFDIETVC 710

Query: 285 --PNLQFVRANGCSSLV 299
               LQ++  + C SL+
Sbjct: 711 CLTKLQYLNLSRCPSLM 727



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 35/307 (11%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGL 101
           S+P  ++SL  L  L +SG SK+   P  V ++  L  L L D  +++ +P S   L  L
Sbjct: 414 SVPEHVTSLSKLMYLNISGSSKISTLPDSVKALRSLLHLDLSDSCNLSSLPESFGDLANL 473

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
             L L  C  L  LP S+N L+SL  L+LSGCC L ++P++ G +E+L  L+++  ++ +
Sbjct: 474 SHLNLANCSLLKALPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNLTNCSLLK 533

Query: 162 PT-SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK 220
               S+  +++L  L  SGC                      C +  +  S   + +LT 
Sbjct: 534 ALPESVNKLRSLLHLDLSGC----------------------CNLCSLPESFGDLTNLTD 571

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQS 279
           L+L++C L    +P  +D L  L  L L+   N  +LP S   ++NL  L L +C  L++
Sbjct: 572 LNLANCVLLN-TLPDSVDKLRDLFCLDLSGCCNLCSLPESSGDMMNLSHLYLANCSLLKT 630

Query: 280 LPQIPPNLQFVRA---NGCSSLVTL---FGALKLCRSKYTIINCIDSLKLLRKNGLAISM 333
           LP+    L+ +R    +GC+SL +L   FG L +  S   +  C D   L +  G    +
Sbjct: 631 LPESVHKLKSLRHLDLSGCTSLCSLPECFGDL-INLSHLNLAKCTDLCSLPKSFGRLFEL 689

Query: 334 LREYLEL 340
             +YL L
Sbjct: 690 --QYLNL 694



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 10/294 (3%)

Query: 1   MASMKDLSDLYLDGTSITE-VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
              + +LS L L   S+ + +P S+  L  L  L L GC NLSSLP +   L+ L  L L
Sbjct: 467 FGDLANLSHLNLANCSLLKALPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNL 526

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           + CS LK  P+ V  +  L  L L G  ++  +P S   L  L  L L  C  L  LP S
Sbjct: 527 TNCSLLKALPESVNKLRSLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPDS 586

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT-SSIFLMKNLRSLYF 177
           ++ L+ L  L+LSGCC L ++P++ G + +L  L ++  ++ +    S+  +K+LR L  
Sbjct: 587 VDKLRDLFCLDLSGCCNLCSLPESSGDMMNLSHLYLANCSLLKTLPESVHKLKSLRHLDL 646

Query: 178 SGCNEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIP 234
           SGC    +       L  NL  L  + C     LP   G +  L  L+LSDC      + 
Sbjct: 647 SGCTSLCSLPECFGDL-INLSHLNLAKCTDLCSLPKSFGRLFELQYLNLSDCL--RLDLW 703

Query: 235 SDIDNLHSLKEL-YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            DI+ +  L +L YLN +   +L      ++NL+ L   D  R   + + P +L
Sbjct: 704 FDIETVCCLTKLQYLNLSRCPSLMHIPESVINLKNLHTLDLSRCHWIQRFPESL 757



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 4/155 (2%)

Query: 2   ASMKDLSDLYLDGTSITE-VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             M +LS LYL   S+ + +P S+  L  L  L L GC +L SLP     L  L  L L+
Sbjct: 612 GDMMNLSHLYLANCSLLKTLPESVHKLKSLRHLDLSGCTSLCSLPECFGDLINLSHLNLA 671

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL---LPGLELLYLNECKNLVRLPS 117
            C+ L   P+    + +L  L L      ++   IE    L  L+ L L+ C +L+ +P 
Sbjct: 672 KCTDLCSLPKSFGRLFELQYLNLSDCLRLDLWFDIETVCCLTKLQYLNLSRCPSLMHIPE 731

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
           S+  LK+L TL+LS C  ++  P++L  + SL+ L
Sbjct: 732 SVINLKNLHTLDLSRCHWIQRFPESLCGMASLKFL 766



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +S  + I  L  +++ L  L+ L L+   NL  LP +   L  LS LNL+  S  +  PE
Sbjct: 430 ISGSSKISTLPDSVKALRSLLHLDLSDSCNLSSLPESFGDLANLSHLNLANCSLLKALPE 489

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
             +    LL + L G   +  LP S   L      NL +C  LK+LP ++N LRSL  + 
Sbjct: 490 SVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNLTNCSLLKALPESVNKLRSLLHLD 549

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGC  L ++ E+ G + +L
Sbjct: 550 LSGCCNLCSLPESFGDLTNL 569



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L++ + ++ L  ++  L  L+ L L+GC NL  LP +   L+ LS LNL+  S  +  PE
Sbjct: 478 LANCSLLKALPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENLSHLNLTNCSLLKALPE 537

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
             +    LL + L G   +  LP S   L+     NL +C  L +LP +++ LR L  + 
Sbjct: 538 SVNKLRSLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPDSVDKLRDLFCLD 597

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGC  L ++ E+ G + +L
Sbjct: 598 LSGCCNLCSLPESSGDMMNL 617



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSG 753
           E +P  +++L  L  LN+SG SK    P+   +   LL + L  +  +  LP S   L+ 
Sbjct: 413 ESVPEHVTSLSKLMYLNISGSSKISTLPDSVKALRSLLHLDLSDSCNLSSLPESFGDLAN 472

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               NL +C  LK+LP ++N LRSL  +  SGC  L ++ E+ G +E+L
Sbjct: 473 LSHLNLANCSLLKALPESVNKLRSLLHLDLSGCCNLSSLPESFGDLENL 521



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 9/144 (6%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L++ + ++ L  ++  L  L+ L L+GC NL  LP +   L  L+ LNL+        P+
Sbjct: 526 LTNCSLLKALPESVNKLRSLLHLDLSGCCNLCSLPESFGDLTNLTDLNLANCVLLNTLPD 585

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSL 778
                  L  + L G   +  LP S    SG++++     L +C  LK+LP +++ L+SL
Sbjct: 586 SVDKLRDLFCLDLSGCCNLCSLPES----SGDMMNLSHLYLANCSLLKTLPESVHKLKSL 641

Query: 779 RMMYPSGCSKLKNVTETLGKVESL 802
           R +  SGC+ L ++ E  G + +L
Sbjct: 642 RHLDLSGCTSLCSLPECFGDLINL 665



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
           LT L+ L L  C +L  +P ++ +LK L TL+LS C  +++FP+ +  M  L  L +
Sbjct: 712 LTKLQYLNLSRCPSLMHIPESVINLKNLHTLDLSRCHWIQRFPESLCGMASLKFLLI 768


>gi|28558777|gb|AAO45748.1| MRGH5 [Cucumis melo subsp. melo]
          Length = 1092

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 151/353 (42%), Gaps = 58/353 (16%)

Query: 3    SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            S + L DL L      E    I   + L  L+ + C NL  +  +I SL  L TL+L  C
Sbjct: 697  SWEALEDLDLSHCKKLEKIPDISSASNLRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNC 756

Query: 63   SKLKKFPQIV----------------------ASMEDLSKLYLDG-TSIAEVPSSIELLP 99
            S LKK P+ +                      +S  +L  L L+  TS+  V  SI  L 
Sbjct: 757  SNLKKLPRYISWNFLQDLNLSWCKKLEEIPDFSSTSNLKHLSLEQCTSLRVVHDSIGSLS 816

Query: 100  GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             L  L L +C NL +LPS +  LKSL+ L LSGCCKLE  P+    ++SL  L +  TAI
Sbjct: 817  KLVSLNLEKCSNLEKLPSYLK-LKSLQNLTLSGCCKLETFPEIDENMKSLYILRLDSTAI 875

Query: 160  RRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLHLPFNLLGKSSCPVALML-----PSLT 213
            R    SI  + +L      GC N      + HL      L  S      M      P++ 
Sbjct: 876  RELPPSIGYLTHLYMFDLKGCTNLISLPCTTHLLKSLGELHLSGSSRFEMFSYIWDPTIN 935

Query: 214  GVCS---------------------------LTKLDLSDCGLGEAAIPSDIDNL-HSLKE 245
             VCS                            T LDL  C +        + N+  SL  
Sbjct: 936  PVCSSSKIMETSLTSEFFHSRVPKESLCFKHFTLLDLEGCNISNVDFLEILCNVASSLSS 995

Query: 246  LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            + L+ NNF +LP+ +   ++L  LEL +CK LQ +P +P  +Q V A GC SL
Sbjct: 996  ILLSENNFSSLPSCLHKFMSLRNLELRNCKFLQEIPNLPLCIQRVDATGCVSL 1048



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 122/278 (43%), Gaps = 28/278 (10%)

Query: 6   DLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L +LYL   S +  +P S   L  L  L L  C NL  +P +  S + L  L+LS C K
Sbjct: 652 NLEELYLSNCSNLKTIPKSFLSLRKLVTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKK 711

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L+K P I ++    S  +   T++  +  SI  L  L  L L  C NL +LP  I+    
Sbjct: 712 LEKIPDISSASNLRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKKLPRYISW-NF 770

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           L+ LNLS C KLE +PD      +L+ L +   T++R    SI  +  L SL    C+  
Sbjct: 771 LQDLNLSWCKKLEEIPD-FSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNL 829

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                                    LPS   + SL  L LS C   E   P   +N+ SL
Sbjct: 830 EK-----------------------LPSYLKLKSLQNLTLSGCCKLE-TFPEIDENMKSL 865

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
             L L+      LP SI  L +L   +L+ C  L SLP
Sbjct: 866 YILRLDSTAIRELPPSIGYLTHLYMFDLKGCTNLISLP 903



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 8/146 (5%)

Query: 652 EEADEFPDIVQV-------LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           ++ +E PD           L   T +R +  +I  L  LV L L  C NLE+LP  +  L
Sbjct: 780 KKLEEIPDFSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNLEKLPSYLK-L 838

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
           K L  L LSG  K   FPEI  +   L  + L+ TAIR LP SI  L+   + +LK C N
Sbjct: 839 KSLQNLTLSGCCKLETFPEIDENMKSLYILRLDSTAIRELPPSIGYLTHLYMFDLKGCTN 898

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLK 790
           L SLP T + L+SL  ++ SG S+ +
Sbjct: 899 LISLPCTTHLLKSLGELHLSGSSRFE 924



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 125/315 (39%), Gaps = 52/315 (16%)

Query: 21  PSSIELLTGLELLTLKG----CKNLSSLPVTISSLK-----------CLRTLELSGC--- 62
           P +   +  L +L + G    CK +  LP  +  +K           C  T +L G    
Sbjct: 554 PEAFRSMKNLRILMVDGNVRFCKKIKYLPNGLKWIKWHRFAHPSLPSCFITKDLVGLDLQ 613

Query: 63  -SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            S +  F + + +   L  L L  + I +  S     P LE LYL+ C NL  +P S   
Sbjct: 614 HSFITNFGKGLQNCMRLKLLDLRHSVILKKISESSAAPNLEELYLSNCSNLKTIPKSFLS 673

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC- 180
           L+ L TL+L  C  L+ +P +    E+LE+LD+S          I    NLRSL F  C 
Sbjct: 674 LRKLVTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKKLEKIPDISSASNLRSLSFEQCT 733

Query: 181 --------------------------NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
                                      + P   SW+     NL   S C     +P  + 
Sbjct: 734 NLVMIHDSIGSLTKLVTLKLQNCSNLKKLPRYISWNFLQDLNL---SWCKKLEEIPDFSS 790

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELED 273
             +L  L L  C      +   I +L  L  L L + +N   LP+ +  L +L+ L L  
Sbjct: 791 TSNLKHLSLEQCT-SLRVVHDSIGSLSKLVSLNLEKCSNLEKLPSYLK-LKSLQNLTLSG 848

Query: 274 CKRLQSLPQIPPNLQ 288
           C +L++ P+I  N++
Sbjct: 849 CCKLETFPEIDENMK 863



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 26/208 (12%)

Query: 616 KMISVDSGCMSCYKKWGRQTVRRQSPQEP--GNCSRLWEEADEFPDIVQVLSDGTDIREL 673
           K++++D       KK  R  +  ++ ++    +C +L    ++ PDI    S  +++R L
Sbjct: 676 KLVTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKKL----EKIPDI----SSASNLRSL 727

Query: 674 SL-----------AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           S            +I  L  LV L L  C NL++LPR IS   +L  LNLS   K  E P
Sbjct: 728 SFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKKLPRYIS-WNFLQDLNLSWCKKLEEIP 786

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           + +S+ + L  + LE  T++R +  SI  LS  +  NL+ C NL+ LPS +  L+SL+ +
Sbjct: 787 DFSSTSN-LKHLSLEQCTSLRVVHDSIGSLSKLVSLNLEKCSNLEKLPSYLK-LKSLQNL 844

Query: 782 YPSGCSKLKNVTETLGKVESLEV-RLSS 808
             SGC KL+   E    ++SL + RL S
Sbjct: 845 TLSGCCKLETFPEIDENMKSLYILRLDS 872



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 653 EADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           E+   P++ ++ LS+ ++++ +  +   L  LV L L+ C NL+++PR+  + + L  L+
Sbjct: 646 ESSAAPNLEELYLSNCSNLKTIPKSFLSLRKLVTLDLHHCVNLKKIPRSYISWEALEDLD 705

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           LS   K  + P+I+S+ +       + T +  +  SI  L+  +   L++C NLK LP  
Sbjct: 706 LSHCKKLEKIPDISSASNLRSLSFEQCTNLVMIHDSIGSLTKLVTLKLQNCSNLKKLPRY 765

Query: 772 I--NGLRSLRMMYPSGCSKLKNVTE 794
           I  N L+ L +   S C KL+ + +
Sbjct: 766 ISWNFLQDLNL---SWCKKLEEIPD 787



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 7/77 (9%)

Query: 655 DEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FP+I + +        D T IREL  +I  L  L    L GC NL  LP T   LK L
Sbjct: 853 ETFPEIDENMKSLYILRLDSTAIRELPPSIGYLTHLYMFDLKGCTNLISLPCTTHLLKSL 912

Query: 708 STLNLSGLSKFREFPEI 724
             L+LSG S+F  F  I
Sbjct: 913 GELHLSGSSRFEMFSYI 929


>gi|215261578|gb|ACJ64858.1| disease resistance protein RPP1-like protein R4 [Arabidopsis
            thaliana]
          Length = 1363

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 152/319 (47%), Gaps = 42/319 (13%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D   + E+P+ +   T LE L L+ C +L  LP +I  L  L+ L+L  CS L K P  +
Sbjct: 838  DSIDLKELPN-LSTATNLEELELRNCSSLMELPSSIEKLTSLQRLDLCDCSSLVKLPPSI 896

Query: 73   ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL--KTLNL 130
             +        ++ + + E+P+ IE    L  L L  C +L+ LP SI   ++L  K LN+
Sbjct: 897  NANNLWELSLINCSRVVELPA-IENATNLWELNLQNCSSLIELPLSIGTARNLFLKELNI 955

Query: 131  SGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
            SGC  L  +P ++G + +LEE D+S  +  +  P SSI  ++NL  L   GC++  A   
Sbjct: 956  SGCSSLVKLPSSIGDMTNLEEFDLSNCSNLVELP-SSIGNLQNLCELIMRGCSKLEA--- 1011

Query: 189  WHLHLPFNL-------LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA--------- 232
                LP N+       L  + C      P ++   ++++L L    + E           
Sbjct: 1012 ----LPTNINLKSLYTLDLTDCSQLKSFPEIS--TNISELWLKGTAIKEVPLSIMSWSPL 1065

Query: 233  IPSDIDNLHSLKE----------LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +   I    SLKE          L+L++++   +P  +  +  L EL L +C  L SLPQ
Sbjct: 1066 VDFQISYFESLKEFPHALDIITGLWLSKSDIQEVPPWVKRMSRLRELTLNNCNNLVSLPQ 1125

Query: 283  IPPNLQFVRANGCSSLVTL 301
            +P +L ++ A+ C SL  L
Sbjct: 1126 LPDSLAYLYADNCKSLERL 1144



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 12/251 (4%)

Query: 43   SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGL 101
            SLP T +  + L  L++S  SKL+K  +    + +L  + L D   + E+P+ +     L
Sbjct: 798  SLPCTFNP-EFLVELDMSS-SKLRKLWEGTKQLRNLKWMDLSDSIDLKELPN-LSTATNL 854

Query: 102  ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
            E L L  C +L+ LPSSI  L SL+ L+L  C  L  +P ++    +L EL +   +   
Sbjct: 855  EELELRNCSSLMELPSSIEKLTSLQRLDLCDCSSLVKLPPSIN-ANNLWELSLINCSRVV 913

Query: 162  PTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCS 217
               +I    NL  L    C+   E P S     +L    L  S C   + LPS  G + +
Sbjct: 914  ELPAIENATNLWELNLQNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTN 973

Query: 218  LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKR 276
            L + DLS+C      +PS I NL +L EL +   +    LP +I+ L +L  L+L DC +
Sbjct: 974  LEEFDLSNCS-NLVELPSSIGNLQNLCELIMRGCSKLEALPTNIN-LKSLYTLDLTDCSQ 1031

Query: 277  LQSLPQIPPNL 287
            L+S P+I  N+
Sbjct: 1032 LKSFPEISTNI 1042



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 83/184 (45%), Gaps = 54/184 (29%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  M +L +  L   S + E+PSSI  L  L  L ++GC  L +LP  I+ LK L TL+L
Sbjct: 968  IGDMTNLEEFDLSNCSNLVELPSSIGNLQNLCELIMRGCSKLEALPTNIN-LKSLYTLDL 1026

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI------------------------ 95
            + CS+LK FP+I     ++S+L+L GT+I EVP SI                        
Sbjct: 1027 TDCSQLKSFPEIST---NISELWLKGTAIKEVPLSIMSWSPLVDFQISYFESLKEFPHAL 1083

Query: 96   ELLPGLEL--------------------LYLNECKNLVRLPSSINGLKSL-----KTLNL 130
            +++ GL L                    L LN C NLV LP   + L  L     K+L  
Sbjct: 1084 DIITGLWLSKSDIQEVPPWVKRMSRLRELTLNNCNNLVSLPQLPDSLAYLYADNCKSLER 1143

Query: 131  SGCC 134
              CC
Sbjct: 1144 LDCC 1147



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 5/142 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + + + EL  +IE L  L +L L  C +L +LP +I+A   L  L+L   S+  E P 
Sbjct: 859 LRNCSSLMELPSSIEKLTSLQRLDLCDCSSLVKLPPSINA-NNLWELSLINCSRVVELPA 917

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS--NLKDCKNLKSLPSTINGLRSLRM 780
           I ++ + L E++L+  +++  LP SI       L   N+  C +L  LPS+I  + +L  
Sbjct: 918 IENATN-LWELNLQNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNLEE 976

Query: 781 MYPSGCSKLKNVTETLGKVESL 802
              S CS L  +  ++G +++L
Sbjct: 977 FDLSNCSNLVELPSSIGNLQNL 998



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 26/120 (21%)

Query: 682  GLVQLTLNGCKNLERLPRTIS-----------------------ALKYLSTLNLSGLSKF 718
             L +  L+ C NL  LP +I                         LK L TL+L+  S+ 
Sbjct: 973  NLEEFDLSNCSNLVELPSSIGNLQNLCELIMRGCSKLEALPTNINLKSLYTLDLTDCSQL 1032

Query: 719  REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
            + FPEI+++   + E+ L+GTAI+ +P SI   S  +   +   ++LK  P  ++ +  L
Sbjct: 1033 KSFPEISTN---ISELWLKGTAIKEVPLSIMSWSPLVDFQISYFESLKEFPHALDIITGL 1089


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 140/276 (50%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +AS+  L  L L    +TEVP +I  LT L+ L L   + L+ +P  I+SL  L+TL L 
Sbjct: 85  IASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQ-LTQVPEAIASLSQLQTLNL- 142

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L + P+ +AS+  L +L L    + EVP +I  L  LE LYLN  + L ++P +I 
Sbjct: 143 NFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQ-LRKVPEAIA 201

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L  L+ L+LS   +L  VP+ +  +  L  L++S   +     +I  +  L+ LY  G 
Sbjct: 202 SLTQLQRLSLSDN-ELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGN 260

Query: 180 --CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                P A AS        L+G     V   + SLT    L +L LSD  L   A+P  I
Sbjct: 261 QLTELPEAIASLTQLQELYLVGNELTAVPEAIASLT---QLQRLSLSDNEL--TAVPEAI 315

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +L  L+ L L+ N    +P +I+ L  L+EL L+D
Sbjct: 316 ASLTHLQGLDLSYNQLTQVPEAIASLSQLQELYLDD 351



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 149/291 (51%), Gaps = 25/291 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++  L  L LD   +T+VP +I  L+ L++L L   K L+ +P  I+SL  L+TL L 
Sbjct: 39  IATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNK-LTEVPEAIASLSQLQTLNL- 96

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL + P+ +A++  L KLYL    + +VP +I  L  L+ L LN    L  +P +I 
Sbjct: 97  IYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLN-FNQLTEVPEAIA 155

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L  L+ LNLS   +L  VP+T+  +  LE L ++   +R+   +I  +  L+ L  S  
Sbjct: 156 SLSQLRRLNLS-YNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSD- 213

Query: 181 NE----PPASASW----HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL-DLSDCGLGEA 231
           NE    P A AS      L+L  N L +        LP    + SLT+L +L   G    
Sbjct: 214 NELTAVPEAIASLSQLRSLNLSNNQLTE--------LPE--AIASLTQLQELYLVGNQLT 263

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +P  I +L  L+ELYL  N    +P +I+ L  L+ L L D   L ++P+
Sbjct: 264 ELPEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSD-NELTAVPE 313



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 20/262 (7%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +TEVP +I  LT L+ L L  C  L+ +P  I+SL  L+ L LS  +KL + P+ +AS+ 
Sbjct: 32  LTEVPEAIATLTQLQRLDL-DCNQLTKVPEAIASLSQLQILNLSN-NKLTEVPEAIASLS 89

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L  L L    + EVP +I  L  L+ LYL+  + L ++P +I  L  L+TLNL    +L
Sbjct: 90  QLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQ-LTQVPEAIASLSQLQTLNL-NFNQL 147

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASW---- 189
             VP+ +  +  L  L++S   +     +I  +  L  LY +       P A AS     
Sbjct: 148 TEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQ 207

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            L L  N L  ++ P A     +  +  L  L+LS+  L E  +P  I +L  L+ELYL 
Sbjct: 208 RLSLSDNEL--TAVPEA-----IASLSQLRSLNLSNNQLTE--LPEAIASLTQLQELYLV 258

Query: 250 RNNFVTLPASISGLLNLEELEL 271
            N    LP +I+ L  L+EL L
Sbjct: 259 GNQLTELPEAIASLTQLQELYL 280


>gi|297741891|emb|CBI33326.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 84/127 (66%), Gaps = 1/127 (0%)

Query: 29  GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSI 88
            LE+LTL+GC NL  LP  I  LK L+TL  +GCSKL++FP+I+A+M  L  L L GT+I
Sbjct: 15  NLEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAI 74

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            ++PSSI  L GL+ L L EC  L ++PS I  L SLK LNL G     ++P T+ ++  
Sbjct: 75  MDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEG-GHFSSIPPTINQLSR 133

Query: 149 LEELDVS 155
           L+ L++S
Sbjct: 134 LKALNLS 140



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 92/204 (45%), Gaps = 47/204 (23%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +P LE+L L  C NL  LP  I  LK L+TL+ +GC KLE  P+ +  +  L  LD+SGT
Sbjct: 13  VPNLEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGT 72

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           AI    SSI  +  L++L    C++        LH                         
Sbjct: 73  AIMDLPSSITHLNGLQTLLLQECSK--------LH------------------------- 99

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
                          IPS I  L SLK+L L   +F ++P +I+ L  L+ L L  C  L
Sbjct: 100 --------------QIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNL 145

Query: 278 QSLPQIPPNLQFVRANGCSSLVTL 301
           + +P++P  L  +  + C+SL  L
Sbjct: 146 EQIPELPSGLINLDVHHCTSLENL 169



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 60/100 (60%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           LTL GC NLE LPR I  LK+L TL+ +G SK   FPEI ++  +L  + L GTAI  LP
Sbjct: 19  LTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLP 78

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           +SI  L+G     L++C  L  +PS I  L SL+ +   G
Sbjct: 79  SSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLEG 118



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 23/101 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL------------------- 41
           MA+M+ L  L L GT+I ++PSSI  L GL+ L L+ C  L                   
Sbjct: 58  MANMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLHQIPSHICYLSSLKKLNLE 117

Query: 42  ----SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
               SS+P TI+ L  L+ L LS C+ L++ P++ + + +L
Sbjct: 118 GGHFSSIPPTINQLSRLKALNLSHCNNLEQIPELPSGLINL 158


>gi|297815592|ref|XP_002875679.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321517|gb|EFH51938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1196

 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 124/515 (24%), Positives = 221/515 (42%), Gaps = 61/515 (11%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ E+PSSI   T LE L L+ C +L  LP +I +   L  L L  CS L K P  + +
Sbjct: 706  SSLVELPSSIGNATKLERLYLRDCSSLVELP-SIGNASKLERLYLDNCSSLVKLPSSINA 764

Query: 75   ------MEDLSKLY----LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
                  +E+ SKL+    L+ +S+ E+P SI     L+ LY++ C +LV+LPSSI  +  
Sbjct: 765  SNLQEFIENASKLWELNLLNCSSLLELPPSIGTATNLKELYISGCSSLVKLPSSIGDMTK 824

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            LK  +LS C  L  VP  +GK++ L +L + G +      +   +++LR+L    C++  
Sbjct: 825  LKKFDLSNCSSLVEVPSAIGKLQKLSKLKMYGCSKLEVLPTNIDLESLRTLDLRNCSQLK 884

Query: 185  ASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE----AAIPSDIDN 239
                   ++ +  L G +   V L + S +         L D G+         P  +D 
Sbjct: 885  RFPEISTNIAYLRLTGTAIKEVPLSIMSWS--------RLYDFGISYFESLKEFPHALD- 935

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
               + +L LN +     P  + G+  L  L L +C  L SLPQ   +L ++ A+ C SL 
Sbjct: 936  --IITQLQLNEDIQEVAPW-VKGMSRLRVLRLYNCNNLVSLPQFSDSLAYIDADNCQSLE 992

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
             L               C + L    ++ +  +   EY               + PG+Q+
Sbjct: 993  RLDCTFNNPDIHLKFPKCFN-LNQEARDLIMHTSTSEY--------------AILPGTQV 1037

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
            P  F ++     +   + +    + + + F  C +F      TG         H++  + 
Sbjct: 1038 PACFNHRATAGGLVEFKLNE-SPLPRALRFKACFMFVKVNEETGDGWSSINVYHDIMDNQ 1096

Query: 420  DGSGEGHYIYFRGK-----FGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWK 474
            +G      +  R K        V+++H+++  +       +  S  +    ++ +D  WK
Sbjct: 1097 NG------LNVRRKPRKCYIDRVLTEHIYIFEVRAE----KVTSTELFFEVKTENDSNWK 1146

Query: 475  VKRCGFHPIYMHEVEEFDETTKQSTR--FTSCNLN 507
            ++ CG   I   + ++F    K + +  F+  +LN
Sbjct: 1147 IRECGLFQILEQKFKKFTFPIKTTNKQQFSGYDLN 1181



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 11/136 (8%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S+LWE           L + + + EL  +I     L +L ++GC +L +LP +I  + 
Sbjct: 773 NASKLWELN---------LLNCSSLLELPPSIGTATNLKELYISGCSSLVKLPSSIGDMT 823

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKN 764
            L   +LS  S   E P       +L ++ + G + +  LP +I+L S   L +L++C  
Sbjct: 824 KLKKFDLSNCSSLVEVPSAIGKLQKLSKLKMYGCSKLEVLPTNIDLESLRTL-DLRNCSQ 882

Query: 765 LKSLPSTINGLRSLRM 780
           LK  P     +  LR+
Sbjct: 883 LKRFPEISTNIAYLRL 898


>gi|227438189|gb|ACP30584.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 980

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 212/509 (41%), Gaps = 126/509 (24%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++ E+PS +   T LE L L  C +L  LP++  +L+ L+TL L GCSKL+ FP  + ++
Sbjct: 545 NLVELPSYVGNATNLENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENFPNNI-TL 603

Query: 76  EDLSKLYLDGTS--------------------------IAEVPSSIELLPGLELLYLNEC 109
           E L+ L L G S                          + EVPS I     LE L L+ C
Sbjct: 604 EFLNDLDLAGCSSLDLSGFSTIVNVVNLQTLNLSSLPQLLEVPSFIGNATNLEDLILSNC 663

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIF 167
            NLV LP  I  L+ LK L L GC KLE +P  +  +ESL EL+++  ++ +  P  S +
Sbjct: 664 SNLVELPLFIGNLQKLKRLRLEGCSKLEVLPTNIN-LESLFELNLNDCSMLKHFPEISTY 722

Query: 168 LMKNLRSLYFSGC---NEPPASASW----HLHLPF--NLLGKSSCPVALMLPSLTGVCSL 218
           +    R+LY  G      PP+  SW     L + +  NL G    P AL    +T +C  
Sbjct: 723 I----RNLYLIGTAIEQVPPSIRSWSRLDELKMSYFENLKG---FPHAL--ERITCMC-- 771

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
               L+D  + E                         LP  +  +  L    L+ C++L 
Sbjct: 772 ----LTDTEIQE-------------------------LPPWVKKISRLSVFVLKGCRKLV 802

Query: 279 SLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK-NGLAISMLREY 337
           +LP I  +++++ A+ C SL  L  +     ++Y  +N  +  KL ++   L I     Y
Sbjct: 803 TLPAISESIRYMDASDCKSLEILECSF---HNQYLTLNFANCFKLSQEARNLIIQNSCRY 859

Query: 338 LELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS-ITVT---RPSYLYNVNKVVGFAICC 393
                          V PG Q+P  F ++  G+  +T+    +P   Y + K       C
Sbjct: 860 --------------AVLPGGQVPPHFTHRATGAGPLTIKLNEKPLPKYMIFKA------C 899

Query: 394 VFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRG--KFGHVVSDHLWLLFLPRHG 451
           +  V            Y      CS + S E   IY     K    +++HL++  +    
Sbjct: 900 ILLV------------YKVDHDACSEENSMEVDVIYQNSNKKLYPALAEHLYIFRVEA-- 945

Query: 452 HNWQFESNLIRLSFRSISDPTWKVKRCGF 480
              +  S+ +   F+   D  WK+  CG 
Sbjct: 946 ---EVTSSELFFEFKLKRDDVWKIGECGL 971



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 22/273 (8%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLP 99
           +S  P  ++ L+ L  L + G SKL+K  + +  +  L  + L D  ++ E+P+ +    
Sbjct: 431 MSCFPCNVN-LEFLVELIMIG-SKLEKLWEGIKPLRSLKWMDLSDSVNLKELPN-LSTAT 487

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD-VSGTA 158
            LE LYL  C +L++LP  + G  S++ L++ GC  L   P   G   +L +L+ VS   
Sbjct: 488 NLEKLYLRNCWSLIKLP-CLPG-NSMEELDIGGCSSLVQFPSFTGNAVNLLKLNLVSFPN 545

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGK------SSCPVALMLPSL 212
           +    S +    NL +L  S C     S    L L F  L K        C      P+ 
Sbjct: 546 LVELPSYVGNATNLENLNLSNC-----SHLVELPLSFGNLQKLQTLILKGCSKLENFPNN 600

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELEL 271
             +  L  LDL+ C   + +  S I N+ +L+ L L+     + +P+ I    NLE+L L
Sbjct: 601 ITLEFLNDLDLAGCSSLDLSGFSTIVNVVNLQTLNLSSLPQLLEVPSFIGNATNLEDLIL 660

Query: 272 EDCKRLQSLPQIPPNLQ---FVRANGCSSLVTL 301
            +C  L  LP    NLQ    +R  GCS L  L
Sbjct: 661 SNCSNLVELPLFIGNLQKLKRLRLEGCSKLEVL 693



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 8/112 (7%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LS+ +++ EL L I  L  L +L L GC  LE LP  I+ L+ L  LNL+  S  + FP
Sbjct: 659 ILSNCSNLVELPLFIGNLQKLKRLRLEGCSKLEVLPTNIN-LESLFELNLNDCSMLKHFP 717

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC--KNLKSLPSTI 772
           EI++    +  ++L GTAI  +P SI   S + L  LK    +NLK  P  +
Sbjct: 718 EIST---YIRNLYLIGTAIEQVPPSIR--SWSRLDELKMSYFENLKGFPHAL 764



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 28/146 (19%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP-------------------E 723
           L  L L+ C +L  LP +   L+ L TL L G SK   FP                   +
Sbjct: 559 LENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENFPNNITLEFLNDLDLAGCSSLD 618

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLS--GNILSNLKD-----CKNLKSLPSTINGLR 776
           ++     +  ++L+   +  LP  +E+ S  GN  +NL+D     C NL  LP  I  L+
Sbjct: 619 LSGFSTIVNVVNLQTLNLSSLPQLLEVPSFIGNA-TNLEDLILSNCSNLVELPLFIGNLQ 677

Query: 777 SLRMMYPSGCSKLKNVTETLGKVESL 802
            L+ +   GCSKL+ V  T   +ESL
Sbjct: 678 KLKRLRLEGCSKLE-VLPTNINLESL 702



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           + +LYL GT+I +VP SI   + L+ L +   +NL   P  +  + C+   +    ++++
Sbjct: 723 IRNLYLIGTAIEQVPPSIRSWSRLDELKMSYFENLKGFPHALERITCMCLTD----TEIQ 778

Query: 67  KFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           + P  V  +  LS   L G   +  +P+  E    +  +  ++CK+L  L  S +     
Sbjct: 779 ELPPWVKKISRLSVFVLKGCRKLVTLPAISE---SIRYMDASDCKSLEILECSFHN--QY 833

Query: 126 KTLNLSGCCKL 136
            TLN + C KL
Sbjct: 834 LTLNFANCFKL 844



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 32/159 (20%)

Query: 660 IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY------------- 706
           +V+++  G+ + +L   I+ L  L  + L+   NL+ LP   +A                
Sbjct: 443 LVELIMIGSKLEKLWEGIKPLRSLKWMDLSDSVNLKELPNLSTATNLEKLYLRNCWSLIK 502

Query: 707 --------LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS--GNIL 756
                   +  L++ G S   +FP  T +   LL+++L        P  +EL S  GN  
Sbjct: 503 LPCLPGNSMEELDIGGCSSLVQFPSFTGNAVNLLKLNL-----VSFPNLVELPSYVGNAT 557

Query: 757 S----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           +    NL +C +L  LP +   L+ L+ +   GCSKL+N
Sbjct: 558 NLENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLEN 596


>gi|242072029|ref|XP_002451291.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
 gi|241937134|gb|EES10279.1| hypothetical protein SORBIDRAFT_05g027070 [Sorghum bicolor]
          Length = 816

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 138/286 (48%), Gaps = 40/286 (13%)

Query: 13  DGTSITEVPSSIELLTG-LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           + + I+ +P SI  L+G LE L L GC  +S LP +   LKC+  L++SGCS +K+ P  
Sbjct: 124 ESSRISALPESIGKLSGCLEFLGLSGCSGISELPASFGDLKCMMYLDMSGCSAIKELPDS 183

Query: 72  VASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
           V  + +L +L L G  S+  +P S+  L  L+ L L  C  +VRLP +I  L  L+ LNL
Sbjct: 184 VGHLTNLQRLELSGCNSLKAIPESLCGLTQLQYLSLEFCTYIVRLPEAIGCLVDLQYLNL 243

Query: 131 SGC-------------CKLEN-VPDTLGKVESLEELDVS--GTAIRRPTSSIFL-----M 169
           S C             C ++  +P  L  +  LE LD+S  G  + +      L     +
Sbjct: 244 SHCGVTELPLHLELALCSIKKELPRALRGLTRLEYLDMSWNGLVVGKMEKDDLLDAMKSL 303

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
            +L+ LY SGC          L   F++    +      L  +  + +L  LDLS  G  
Sbjct: 304 TSLKVLYLSGC----------LKRCFDVKKNDA-----YLDFIGTLTNLEHLDLSSNGEL 348

Query: 230 EAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDC 274
           E  +P  I NL  L  L L N +  ++LP SISG   L+ L L+ C
Sbjct: 349 E-YLPESIGNLKRLHTLNLRNCSGLMSLPVSISGATGLKSLVLDGC 393



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 144/324 (44%), Gaps = 59/324 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLK-CLRTLEL 59
           +  +K L  L+        +P  I  L  L+ L LK    +S+LP +I  L  CL  L L
Sbjct: 88  IGKLKQLKYLFAPRMQNDVLPEYINGLAKLQYLNLKESSRISALPESIGKLSGCLEFLGL 147

Query: 60  SGCSKLKKFPQIVASMEDLS-KLYLDGT---SIAEVPSSIELLPGLELLYLNECKNLVRL 115
           SGCS + + P   AS  DL   +YLD +   +I E+P S+  L  L+ L L+ C +L  +
Sbjct: 148 SGCSGISELP---ASFGDLKCMMYLDMSGCSAIKELPDSVGHLTNLQRLELSGCNSLKAI 204

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           P S+ GL  L+ L+L  C  +  +P+ +G +  L+ L++S                    
Sbjct: 205 PESLCGLTQLQYLSLEFCTYIVRLPEAIGCLVDLQYLNLS-------------------- 244

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIP 234
              G  E P      LHL   L     C +   LP +L G+  L  LD+S  GL    + 
Sbjct: 245 -HCGVTELP------LHLELAL-----CSIKKELPRALRGLTRLEYLDMSWNGLVVGKME 292

Query: 235 SD-----IDNLHSLKELYLN---------RNNFVTLPASISGLLNLEELELEDCKRLQSL 280
            D     + +L SLK LYL+         + N   L   I  L NLE L+L     L+ L
Sbjct: 293 KDDLLDAMKSLTSLKVLYLSGCLKRCFDVKKNDAYLDF-IGTLTNLEHLDLSSNGELEYL 351

Query: 281 PQIPPNLQFVRA---NGCSSLVTL 301
           P+   NL+ +       CS L++L
Sbjct: 352 PESIGNLKRLHTLNLRNCSGLMSL 375



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 29/250 (11%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP 92
           L    C  L       S  KCLR L+ SGCS + + P  +  ++ L  L+        +P
Sbjct: 50  LHFSDCNKLDVANGAFSFAKCLRILDFSGCSSV-QLPASIGKLKQLKYLFAPRMQNDVLP 108

Query: 93  SSIELLPGLELLYLNECKNLVRLPSSINGLKS-LKTLNLSGCCKLENVPDTLGKVESLEE 151
             I  L  L+ L L E   +  LP SI  L   L+ L LSGC  +  +P + G ++ +  
Sbjct: 109 EYINGLAKLQYLNLKESSRISALPESIGKLSGCLEFLGLSGCSGISELPASFGDLKCMMY 168

Query: 152 LDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS-------- 202
           LD+SG +AI+    S+  + NL+ L  SGCN   A       +P +L G +         
Sbjct: 169 LDMSGCSAIKELPDSVGHLTNLQRLELSGCNSLKA-------IPESLCGLTQLQYLSLEF 221

Query: 203 CPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
           C   + LP   G +  L  L+LS CG+ E  +  ++  L S+K+          LP ++ 
Sbjct: 222 CTYIVRLPEAIGCLVDLQYLNLSHCGVTELPLHLEL-ALCSIKK---------ELPRALR 271

Query: 262 GLLNLEELEL 271
           GL  LE L++
Sbjct: 272 GLTRLEYLDM 281



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 117/295 (39%), Gaps = 84/295 (28%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R L  S C+KL       +  + L  L   G S  ++P+SI  L  L+ L+    +N V
Sbjct: 47  VRALHFSDCNKLDVANGAFSFAKCLRILDFSGCSSVQLPASIGKLKQLKYLFAPRMQNDV 106

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES-LEELDVSGTAIRRPTSSIFLMKNL 172
            LP  INGL  L+ LNL    ++  +P+++GK+   LE L +SG                
Sbjct: 107 -LPEYINGLAKLQYLNLKESSRISALPESIGKLSGCLEFLGLSGC--------------- 150

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
                SG +E PAS            G   C              +  LD+S C      
Sbjct: 151 -----SGISELPAS-----------FGDLKC--------------MMYLDMSGCS----- 175

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQF 289
                    ++KEL          P S+  L NL+ LEL  C  L+++P+       LQ+
Sbjct: 176 ---------AIKEL----------PDSVGHLTNLQRLELSGCNSLKAIPESLCGLTQLQY 216

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVS 344
           +    C+ +V L  A          I C+  L+ L  +   ++ L  +LEL   S
Sbjct: 217 LSLEFCTYIVRLPEA----------IGCLVDLQYLNLSHCGVTELPLHLELALCS 261



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE-IHLEG-TAIRGLPASIELLSGN 754
           LP  I+ L  L  LNL   S+    PE        LE + L G + I  LPAS   L   
Sbjct: 107 LPEYINGLAKLQYLNLKESSRISALPESIGKLSGCLEFLGLSGCSGISELPASFGDLKCM 166

Query: 755 ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +  ++  C  +K LP ++  L +L+ +  SGC+ LK + E+L  +  L+
Sbjct: 167 MYLDMSGCSAIKELPDSVGHLTNLQRLELSGCNSLKAIPESLCGLTQLQ 215



 Score = 45.8 bits (107), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SG 156
            P L+ L L +C NL  LP  I  L SL++L L  C  +  +P+ L  + SL+EL +   
Sbjct: 674 FPALQHLQLGKCPNLGSLPEGIRHLSSLQSLALRSCDSISALPEWLSDISSLKELHICEC 733

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNE 182
           T+I+     I  + NL+ L   G  E
Sbjct: 734 TSIKSLPQCIQQLTNLQKLVIYGNQE 759



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 38/66 (57%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P  I  L+ L+ L L+ C ++S+LP  +S +  L+ L +  C+ +K  PQ +  + +L 
Sbjct: 691 LPEGIRHLSSLQSLALRSCDSISALPEWLSDISSLKELHICECTSIKSLPQCIQQLTNLQ 750

Query: 80  KLYLDG 85
           KL + G
Sbjct: 751 KLVIYG 756



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 31/149 (20%)

Query: 165 SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
           S  L   +R+L+FS CN+        L +       + C              L  LD S
Sbjct: 40  SYILPSKVRALHFSDCNK--------LDVANGAFSFAKC--------------LRILDFS 77

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ-- 282
            C      +P+ I  L  LK L+  R     LP  I+GL  L+ L L++  R+ +LP+  
Sbjct: 78  GCS--SVQLPASIGKLKQLKYLFAPRMQNDVLPEYINGLAKLQYLNLKESSRISALPESI 135

Query: 283 --IPPNLQFVRANGCSSLVTL---FGALK 306
             +   L+F+  +GCS +  L   FG LK
Sbjct: 136 GKLSGCLEFLGLSGCSGISELPASFGDLK 164



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQ-LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           L + + I  L  +I  L G ++ L L+GC  +  LP +   LK +  L++SG S  +E P
Sbjct: 122 LKESSRISALPESIGKLSGCLEFLGLSGCSGISELPASFGDLKCMMYLDMSGCSAIKELP 181

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           +       L  + L G  +++ +P S+  L+     +L+ C  +  LP  I  L  L+ +
Sbjct: 182 DSVGHLTNLQRLELSGCNSLKAIPESLCGLTQLQYLSLEFCTYIVRLPEAIGCLVDLQYL 241

Query: 782 YPSGC 786
             S C
Sbjct: 242 NLSHC 246



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)

Query: 29  GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTS 87
            L+ L L  C NL SLP  I  L  L++L L  C  +   P+ ++ +  L +L++ + TS
Sbjct: 676 ALQHLQLGKCPNLGSLPEGIRHLSSLQSLALRSCDSISALPEWLSDISSLKELHICECTS 735

Query: 88  IAEVPSSIELLPGLELLYL 106
           I  +P  I+ L  L+ L +
Sbjct: 736 IKSLPQCIQQLTNLQKLVI 754


>gi|83747846|ref|ZP_00944879.1| PopC [Ralstonia solanacearum UW551]
 gi|83725493|gb|EAP72638.1| PopC [Ralstonia solanacearum UW551]
          Length = 890

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 141/297 (47%), Gaps = 42/297 (14%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L  +   + E+   IE L  LE L+LKG KNL +LP  +  L  L  L L     +K
Sbjct: 193 LKKLATEDCDLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLRETG-IK 251

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P +      L +L +D + + ++P+    LP L  L L++ K L  LPSS   L +LK
Sbjct: 252 TLPPM-GEASALQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALK 309

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           TL+L G  KLE++P + G++  L+ L ++   IR    ++  M+   SL      E   +
Sbjct: 310 TLSLQGNPKLESLPQSFGQLSGLQALTLTDNHIR----ALPSMRGASSLQTMTVAE---A 362

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
           A   L   F+ LG                 +L  L LSD  L E  +P+DI NL +LK L
Sbjct: 363 ALEKLPADFSTLG-----------------NLAHLSLSDTKLRE--LPADIGNLQALKTL 403

Query: 247 YLNRNN--FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            L RNN     LPASI  L +LEEL L    R + LP +         NG S L TL
Sbjct: 404 TL-RNNEKLGALPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 137/316 (43%), Gaps = 60/316 (18%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++  L +L L  T + E+PSS   L+ L+ L+L+G   L SLP +   L  L+ L L+  
Sbjct: 281 ALPQLVNLSLSDTKLRELPSSFGNLSALKTLSLQGNPKLESLPQSFGQLSGLQALTLTD- 339

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           + ++  P +  +   L  + +   ++ ++P+    L  L  L L++ K L  LP+ I  L
Sbjct: 340 NHIRALPSMRGA-SSLQTMTVAEAALEKLPADFSTLGNLAHLSLSDTK-LRELPADIGNL 397

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           ++LKTL L    KL  +P ++ ++  LEEL +SG   R                      
Sbjct: 398 QALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRE--------------------- 436

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                                     LPSL G   L  L + +  L  A++P+D D L  
Sbjct: 437 --------------------------LPSLNGASGLKTLTVENTSL--ASLPADFDALRK 468

Query: 243 -LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP----PNLQFVRANGCSS 297
            L +L L+    + LPAS+  L  L  L L    RL++LP        N+Q +  + C  
Sbjct: 469 HLTQLTLSNTQLLELPASVGALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPR 528

Query: 298 LVTL---FGALKLCRS 310
           L TL    GAL   R+
Sbjct: 529 LRTLPQSIGALSNLRT 544



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 104/182 (57%), Gaps = 6/182 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +++ +L+ L L  T + E+P+ I  L  L+ LTL+  + L +LP +I  L  L  L LSG
Sbjct: 372 STLGNLAHLSLSDTKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG 431

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL-PGLELLYLNECKNLVRLPSSIN 120
            ++ ++ P +  +   L  L ++ TS+A +P+  + L   L  L L+  + L+ LP+S+ 
Sbjct: 432 -NRFRELPSLNGA-SGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQ-LLELPASVG 488

Query: 121 GLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
            L  L +L L+   +LE +P D++ ++++++ +D+S    +R    SI  + NLR+L  S
Sbjct: 489 ALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLS 548

Query: 179 GC 180
           GC
Sbjct: 549 GC 550



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 7/138 (5%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL--SGLSKFREFPEITS 726
           D+ EL   IE LF L  L+L G KNL+ LP  +  L  LS L L  +G+       E ++
Sbjct: 202 DLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLRETGIKTLPPMGEASA 261

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
               L  + ++ + +  LP     L   +  +L D K L+ LPS+   L +L+ +   G 
Sbjct: 262 ----LQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALKTLSLQGN 316

Query: 787 SKLKNVTETLGKVESLEV 804
            KL+++ ++ G++  L+ 
Sbjct: 317 PKLESLPQSFGQLSGLQA 334



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 50/174 (28%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD T +REL   I  L  L  LTL   + L  LP +I  L +L  L LSG ++FRE P 
Sbjct: 382 LSD-TKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG-NRFRELPS 439

Query: 724 ITSS-----------------------RDQLLEIHLEGTAIRGLPASIELLS-------- 752
           +  +                       R  L ++ L  T +  LPAS+  LS        
Sbjct: 440 LNGASGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQLLELPASVGALSRLTSLTLT 499

Query: 753 ----------------GNI-LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
                            N+ + +L DC  L++LP +I  L +LR +  SGC+ L
Sbjct: 500 KNARLEALPDDSVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLSGCTSL 553



 Score = 45.8 bits (107), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 657 FPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P +V +    T +REL  +   L  L  L+L G   LE LP++   L  L  L L+  +
Sbjct: 282 LPQLVNLSLSDTKLRELPSSFGNLSALKTLSLQGNPKLESLPQSFGQLSGLQALTLTD-N 340

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS-NLKDCKNLKSLPSTINGL 775
             R  P +  +   L  + +   A+  LPA    L GN+   +L D K L+ LP+ I  L
Sbjct: 341 HIRALPSMRGA-SSLQTMTVAEAALEKLPADFSTL-GNLAHLSLSDTK-LRELPADIGNL 397

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKA 835
           ++L+ +      KL  +  ++ ++  LE    S NR +     +        TV   + A
Sbjct: 398 QALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRELPSLNGASGLKTLTVENTSLA 457

Query: 836 ELLRDSDSWKKNVDKCMKLSTT 857
            L  D D+ +K++ + + LS T
Sbjct: 458 SLPADFDALRKHLTQ-LTLSNT 478



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 23  SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK--LKKFPQIV 72
           S+  L  ++++ L  C  L +LP +I +L  LRTL+LSGC+   LK  P  V
Sbjct: 511 SVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLSGCTSLTLKDLPHSV 562


>gi|227438217|gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 12/190 (6%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            ++    L  L LD   S+ ++  S+  L  L +L L GCK L +LP  I +L+ LRTL L
Sbjct: 2041 LSKATSLEKLNLDNCESLVDLTDSVRHLNNLGVLELSGCKKLKNLPNNI-NLRLLRTLHL 2099

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             GCS L+ FP +    E++ K+ LD T+I E+P+SIE L  L+ L+L+ CK L  LP +I
Sbjct: 2100 EGCSSLEDFPFLS---ENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTI 2156

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              + SL TL LS C  +   P+    +ESL    + GTAI    ++I     L  L  SG
Sbjct: 2157 RNIDSLTTLWLSNCPNITLFPEVGDNIESLA---LKGTAIEEVPATIGDKSRLCYLNMSG 2213

Query: 180  C----NEPPA 185
            C    N PP 
Sbjct: 2214 CQRLKNLPPT 2223



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 6/160 (3%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +++  + LD T+I E+P+SIE L+ L+ L L GCK L +LP TI ++  L TL LS C  
Sbjct: 2113 ENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTLWLSNCPN 2172

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            +  FP++  ++E L+   L GT+I EVP++I     L  L ++ C+ L  LP ++  L +
Sbjct: 2173 ITLFPEVGDNIESLA---LKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPPTLKNLTN 2229

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
            LK L L GC  +   P+T  +   L+ LD++GT+I   TS
Sbjct: 2230 LKFLLLRGCTNITERPETACR---LKALDLNGTSIMEETS 2266



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 7/158 (4%)

Query: 655  DEFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
            ++FP    ++ ++  D T I E+  +IE L  L  L L+GCK L+ LPRTI  +  L+TL
Sbjct: 2106 EDFPFLSENVRKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTL 2165

Query: 711  NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
             LS       FPE+    D +  + L+GTAI  +PA+I   S     N+  C+ LK+LP 
Sbjct: 2166 WLSNCPNITLFPEVG---DNIESLALKGTAIEEVPATIGDKSRLCYLNMSGCQRLKNLPP 2222

Query: 771  TINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
            T+  L +L+ +   GC+ +    ET  ++++L++  +S
Sbjct: 2223 TLKNLTNLKFLLLRGCTNITERPETACRLKALDLNGTS 2260



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 30/265 (11%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
            LR + L GC +L + P + +    L KL LD   S+ ++  S+  L  L +L L+ CK L
Sbjct: 2024 LRRMNLRGCRRLLEVPNL-SKATSLEKLNLDNCESLVDLTDSVRHLNNLGVLELSGCKKL 2082

Query: 113  VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              LP++IN L+ L+TL+L GC  LE+ P      E++ ++ +  TAI    +SI  +  L
Sbjct: 2083 KNLPNNIN-LRLLRTLHLEGCSSLEDFPFL---SENVRKITLDETAIEEIPASIERLSEL 2138

Query: 173  RSLYFSGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLPSLTGVCSLTKLDLS 224
            ++L+ SGC +         +LP  +        L  S+CP   + P +    ++  L L 
Sbjct: 2139 KTLHLSGCKKLK-------NLPRTIRNIDSLTTLWLSNCPNITLFPEVGD--NIESLALK 2189

Query: 225  DCGLGEAAIPSDIDNLHSLKELYLNRNN---FVTLPASISGLLNLEELELEDCKRLQSLP 281
               + E  +P+ I +   L   YLN +       LP ++  L NL+ L L  C  +   P
Sbjct: 2190 GTAIEE--VPATIGDKSRL--CYLNMSGCQRLKNLPPTLKNLTNLKFLLLRGCTNITERP 2245

Query: 282  QIPPNLQFVRANGCSSLVTLFGALK 306
            +    L+ +  NG S +    G+++
Sbjct: 2246 ETACRLKALDLNGTSIMEETSGSVQ 2270



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 4/134 (2%)

Query: 672  ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
            +L+ ++  L  L  L L+GCK L+ LP  I+ L+ L TL+L G S   +FP ++   + +
Sbjct: 2060 DLTDSVRHLNNLGVLELSGCKKLKNLPNNIN-LRLLRTLHLEGCSSLEDFPFLS---ENV 2115

Query: 732  LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
             +I L+ TAI  +PASIE LS     +L  CK LK+LP TI  + SL  ++ S C  +  
Sbjct: 2116 RKITLDETAIEEIPASIERLSELKTLHLSGCKKLKNLPRTIRNIDSLTTLWLSNCPNITL 2175

Query: 792  VTETLGKVESLEVR 805
              E    +ESL ++
Sbjct: 2176 FPEVGDNIESLALK 2189


>gi|207739231|ref|YP_002257624.1| type III effector protein popc [Ralstonia solanacearum IPO1609]
 gi|206592604|emb|CAQ59510.1| type III effector protein popc [Ralstonia solanacearum IPO1609]
          Length = 890

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 141/297 (47%), Gaps = 42/297 (14%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L  +   + E+   IE L  LE L+LKG KNL +LP  +  L  L  L L     +K
Sbjct: 193 LKKLATEDCDLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLRETG-IK 251

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P +      L +L +D + + ++P+    LP L  L L++ K L  LPSS   L +LK
Sbjct: 252 TLPPM-GEASALQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALK 309

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           TL+L G  KLE++P + G++  L+ L ++   IR    ++  M+   SL      E   +
Sbjct: 310 TLSLQGNPKLESLPQSFGQLSGLQALTLTDNHIR----ALPSMRGASSLQTMTVAE---A 362

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
           A   L   F+ LG                 +L  L LSD  L E  +P+DI NL +LK L
Sbjct: 363 ALEKLPADFSTLG-----------------NLAHLSLSDTKLRE--LPADIGNLQALKTL 403

Query: 247 YLNRNN--FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            L RNN     LPASI  L +LEEL L    R + LP +         NG S L TL
Sbjct: 404 TL-RNNEKLGALPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 137/316 (43%), Gaps = 60/316 (18%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++  L +L L  T + E+PSS   L+ L+ L+L+G   L SLP +   L  L+ L L+  
Sbjct: 281 ALPQLVNLSLSDTKLRELPSSFGNLSALKTLSLQGNPKLESLPQSFGQLSGLQALTLTD- 339

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           + ++  P +  +   L  + +   ++ ++P+    L  L  L L++ K L  LP+ I  L
Sbjct: 340 NHIRALPSMRGA-SSLQTMTVAEAALEKLPADFSTLGNLAHLSLSDTK-LRELPADIGNL 397

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           ++LKTL L    KL  +P ++ ++  LEEL +SG   R                      
Sbjct: 398 QALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRE--------------------- 436

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                                     LPSL G   L  L + +  L  A++P+D D L  
Sbjct: 437 --------------------------LPSLNGASGLKTLTVENTSL--ASLPADFDALRK 468

Query: 243 -LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP----PNLQFVRANGCSS 297
            L +L L+    + LPAS+  L  L  L L    RL++LP        N+Q +  + C  
Sbjct: 469 HLTQLTLSNTQLLELPASVGALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPR 528

Query: 298 LVTL---FGALKLCRS 310
           L TL    GAL   R+
Sbjct: 529 LRTLPQSIGALSNLRT 544



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 104/182 (57%), Gaps = 6/182 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +++ +L+ L L  T + E+P+ I  L  L+ LTL+  + L +LP +I  L  L  L LSG
Sbjct: 372 STLGNLAHLSLSDTKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG 431

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL-PGLELLYLNECKNLVRLPSSIN 120
            ++ ++ P +  +   L  L ++ TS+A +P+  + L   L  L L+  + L+ LP+S+ 
Sbjct: 432 -NRFRELPSLNGA-SGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQ-LLELPASVG 488

Query: 121 GLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
            L  L +L L+   +LE +P D++ ++++++ +D+S    +R    SI  + NLR+L  S
Sbjct: 489 ALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLS 548

Query: 179 GC 180
           GC
Sbjct: 549 GC 550



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 7/138 (5%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL--SGLSKFREFPEITS 726
           D+ EL   IE LF L  L+L G KNL+ LP  +  L  LS L L  +G+       E ++
Sbjct: 202 DLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLRETGIKTLPPMGEASA 261

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
               L  + ++ + +  LP     L   +  +L D K L+ LPS+   L +L+ +   G 
Sbjct: 262 ----LQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALKTLSLQGN 316

Query: 787 SKLKNVTETLGKVESLEV 804
            KL+++ ++ G++  L+ 
Sbjct: 317 PKLESLPQSFGQLSGLQA 334



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 50/174 (28%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD T +REL   I  L  L  LTL   + L  LP +I  L +L  L LSG ++FRE P 
Sbjct: 382 LSD-TKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG-NRFRELPS 439

Query: 724 ITSS-----------------------RDQLLEIHLEGTAIRGLPASIELLS-------- 752
           +  +                       R  L ++ L  T +  LPAS+  LS        
Sbjct: 440 LNGASGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQLLELPASVGALSRLTSLTLT 499

Query: 753 ----------------GNI-LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
                            N+ + +L DC  L++LP +I  L +LR +  SGC+ L
Sbjct: 500 KNARLEALPDDSVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLSGCTSL 553



 Score = 45.8 bits (107), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 657 FPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P +V +    T +REL  +   L  L  L+L G   LE LP++   L  L  L L+  +
Sbjct: 282 LPQLVNLSLSDTKLRELPSSFGNLSALKTLSLQGNPKLESLPQSFGQLSGLQALTLTD-N 340

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS-NLKDCKNLKSLPSTINGL 775
             R  P +  +   L  + +   A+  LPA    L GN+   +L D K L+ LP+ I  L
Sbjct: 341 HIRALPSMRGA-SSLQTMTVAEAALEKLPADFSTL-GNLAHLSLSDTK-LRELPADIGNL 397

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKA 835
           ++L+ +      KL  +  ++ ++  LE    S NR +     +        TV   + A
Sbjct: 398 QALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRELPSLNGASGLKTLTVENTSLA 457

Query: 836 ELLRDSDSWKKNVDKCMKLSTT 857
            L  D D+ +K++ + + LS T
Sbjct: 458 SLPADFDALRKHLTQ-LTLSNT 478



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 23  SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK--LKKFPQIV 72
           S+  L  ++++ L  C  L +LP +I +L  LRTL+LSGC+   LK  P  V
Sbjct: 511 SVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLSGCTSLTLKDLPHSV 562


>gi|227438219|gb|ACP30599.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 963

 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 15/226 (6%)

Query: 16  SITEVP-SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           ++ E+P SS+  L  L    L  CKNL SLP  I+ LK LR+L L+GCS L++FP I  +
Sbjct: 717 NLVEIPDSSLRQLNKLVHFKLSNCKNLKSLPNNIN-LKSLRSLHLNGCSSLEEFPFISET 775

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           +E   KL L+ TSI +VP SIE L  L  ++L+ CK L+ LP  I  LK L  L L+ C 
Sbjct: 776 VE---KLLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCP 832

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWH 190
            + + P+ LG+  S+  L+++ T I+    +I     LR L  SGC++    PP      
Sbjct: 833 NVISFPE-LGR--SIRWLNLNKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLG 889

Query: 191 LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
                NL G   C      P+L G  ++  LDL    + E  + S+
Sbjct: 890 QLKYLNLRG---CVNVTESPNLAGGKTMKALDLHGTSITEKLVGSN 932



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 92/179 (51%), Gaps = 19/179 (10%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L+ TSI +VP SIE LT L  + L GCK L +LP  I +LK L  L L+ C  +  FP
Sbjct: 779 LLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFP 838

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           ++  S+  L+   L+ T I EVP +I     L  L ++ C  L+ LP ++  L  LK LN
Sbjct: 839 ELGRSIRWLN---LNKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLGQLKYLN 895

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRR---------------PTSSIFLMKNLR 173
           L GC  +   P+  G  ++++ LD+ GT+I                 P    F M+N+R
Sbjct: 896 LRGCVNVTESPNLAGG-KTMKALDLHGTSITEKLVGSNSEEPPQCEVPVIRRFFMRNVR 953



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 38/248 (15%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVP-SSIELLPGLELLYLNECKN 111
           LR+L L  C  L +FP + +   +L  L L    ++ E+P SS+  L  L    L+ CKN
Sbjct: 684 LRSLNLISCKHLNEFPDL-SKATNLESLKLSNCDNLVEIPDSSLRQLNKLVHFKLSNCKN 742

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LP++IN LKSL++L+L+GC  LE  P      E++E+L ++ T+I++   SI  +  
Sbjct: 743 LKSLPNNIN-LKSLRSLHLNGCSSLEEFPFI---SETVEKLLLNETSIQQVPPSIERLTR 798

Query: 172 LRSLYFSGCNEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
           LR ++ SGC           +L F N LG ++CP  +  P L                  
Sbjct: 799 LRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFPELG----------------- 841

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP---NL 287
                      S++ L LN+     +P +I     L  L +  C +L +LP        L
Sbjct: 842 ----------RSIRWLNLNKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPPTVKKLGQL 891

Query: 288 QFVRANGC 295
           +++   GC
Sbjct: 892 KYLNLRGC 899



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 25/181 (13%)

Query: 634 QTVRRQSPQEPGNCSRL----WEEADEFPDIVQVLSDGTDIRELSLA------------I 677
           QTV   S Q+ GN   L     +  +EFPD    LS  T++  L L+            +
Sbjct: 671 QTVWSGSQQDLGNLRSLNLISCKHLNEFPD----LSKATNLESLKLSNCDNLVEIPDSSL 726

Query: 678 ELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE 737
             L  LV   L+ CKNL+ LP  I+ LK L +L+L+G S   EFP I+ + ++LL   L 
Sbjct: 727 RQLNKLVHFKLSNCKNLKSLPNNIN-LKSLRSLHLNGCSSLEEFPFISETVEKLL---LN 782

Query: 738 GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
            T+I+ +P SIE L+     +L  CK L +LP  I  L+ L  +  + C  + +  E LG
Sbjct: 783 ETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFPE-LG 841

Query: 798 K 798
           +
Sbjct: 842 R 842



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 10/145 (6%)

Query: 655 DEFPDIVQ----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           +EFP I +    +L + T I+++  +IE L  L  + L+GCK L  LP  I  LK+L+ L
Sbjct: 767 EEFPFISETVEKLLLNETSIQQVPPSIERLTRLRDIHLSGCKRLMNLPECIKNLKFLNDL 826

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
            L+       FPE+  S   +  ++L  T I+ +P +I   S     N+  C  L +LP 
Sbjct: 827 GLANCPNVISFPELGRS---IRWLNLNKTGIQEVPLTIGDKSELRYLNMSGCDKLMTLPP 883

Query: 771 TINGLRSLRMMYPSGCSKLKNVTET 795
           T+  L  L+ +   GC    NVTE+
Sbjct: 884 TVKKLGQLKYLNLRGCV---NVTES 905



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 118/286 (41%), Gaps = 63/286 (22%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLELL----YLN-ECK 110
           L++S  ++L   P I   M +L  L +   +S+ E  S   +L GLE L    YL+ +  
Sbjct: 589 LDMSEGNELSITPGIFKKMPNLKLLEFYTNSSVEE--SRTRMLDGLEYLPTLRYLHWDAY 646

Query: 111 NLVRLP---------------SSIN--------GLKSLKTLNLSGCCKLENVPDTLGKVE 147
           +L  LP               SSI          L +L++LNL  C  L   PD L K  
Sbjct: 647 HLKSLPPQFCTSFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLISCKHLNEFPD-LSKAT 705

Query: 148 SLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
           +LE L +S     +  P SS+  +  L     S C    +                    
Sbjct: 706 NLESLKLSNCDNLVEIPDSSLRQLNKLVHFKLSNCKNLKS-------------------- 745

Query: 206 ALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
              LP+   + SL  L L+ C  L E    S+     ++++L LN  +   +P SI  L 
Sbjct: 746 ---LPNNINLKSLRSLHLNGCSSLEEFPFISE-----TVEKLLLNETSIQQVPPSIERLT 797

Query: 265 NLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRS 310
            L ++ L  CKRL +LP+   NL+F+   G ++   +    +L RS
Sbjct: 798 RLRDIHLSGCKRLMNLPECIKNLKFLNDLGLANCPNVISFPELGRS 843



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 5/97 (5%)

Query: 707 LSTLNLSGLSKFREFPEITSSRD-QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
           L +LNL       EFP+++ + + + L++      +    +S+  L+  +   L +CKNL
Sbjct: 684 LRSLNLISCKHLNEFPDLSKATNLESLKLSNCDNLVEIPDSSLRQLNKLVHFKLSNCKNL 743

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKN---VTETLGKV 799
           KSLP+ IN L+SLR ++ +GCS L+    ++ET+ K+
Sbjct: 744 KSLPNNIN-LKSLRSLHLNGCSSLEEFPFISETVEKL 779


>gi|168032791|ref|XP_001768901.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679813|gb|EDQ66255.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 562

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 156/294 (53%), Gaps = 31/294 (10%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  L+ L  L +  C +L+SLP  + +L  L TL +SGC  L   P+ + +
Sbjct: 77  SSLTSLPNELGNLSSLTTLDMGWCSSLTSLPKELGNLISLTTLNISGCGSLTSLPKELGN 136

Query: 75  MEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L + G  S+  +P+ +  L  L  L +NEC++L  LP +   L SL TL+++GC
Sbjct: 137 LISLTTLNISGCGSLTSLPNELGNLTSLTTLNMNECRSLTLLPKNFGNLTSLTTLHMNGC 196

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPT--SSIFLMKNLRSLYFSGCNEPPASASWHL 191
             L+++P+ LG +  L  L+++G  +  P+  +    + +L +LY S C       S  +
Sbjct: 197 ISLKSLPNELGNLTYLITLNING-CLSLPSLPNEFGNLTSLTTLYISEC-------SSLM 248

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR- 250
            LP N  G               + SLT L +  C    +++P++  NL SL  LY++  
Sbjct: 249 SLP-NEFGN--------------LISLTTLYMQSCK-SLSSLPNEFGNLTSLTTLYISGF 292

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           ++ ++LP  +S L++L  L + +C  L SLP+   N   L  +  NGC+SL +L
Sbjct: 293 SSLISLPNELSNLISLTILYINECSSLISLPKELGNLTSLTILNMNGCTSLTSL 346



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 18/314 (5%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L  L ++G  S+  +P+    LT L  L +  C +L SLP    +L  L TL +
Sbjct: 206 LGNLTYLITLNINGCLSLPSLPNEFGNLTSLTTLYISECSSLMSLPNEFGNLISLTTLYM 265

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  L   P    ++  L+ LY+ G +S+  +P+ +  L  L +LY+NEC +L+ LP  
Sbjct: 266 QSCKSLSSLPNEFGNLTSLTTLYISGFSSLISLPNELSNLISLTILYINECSSLISLPKE 325

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLY 176
           +  L SL  LN++GC  L ++P  LG + SL  L++    + I  P + +  + +L +L 
Sbjct: 326 LGNLTSLTILNMNGCTSLTSLPKELGNLISLTTLNIQWCKSLISLP-NELGNLTSLTTLK 384

Query: 177 FSGC----NEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEA 231
              C    + P    +       N+ G   C     LP  L     LT LD++ C +   
Sbjct: 385 MECCKGLTSLPNELGNLTSLTSLNMTG---CLSLTSLPRELGNFTLLTILDMNGC-ISLI 440

Query: 232 AIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
           ++P ++ NL SL  L +    +  +LP  +  L +L  L +  C  L+SLP    NL ++
Sbjct: 441 SLPKELGNLTSLTTLNMEWCKSLTSLPIELGNLTSLTTLNMNGCTSLKSLPNELGNLTYL 500

Query: 291 RA---NGCSSLVTL 301
                NGCSSL +L
Sbjct: 501 TTLNMNGCSSLTSL 514



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 23/301 (7%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+T +P  +  L  L    + GC +L+SLP  + +L  L TL ++ C  L   P+ + ++
Sbjct: 6   SLTSLPKELSNLIFLTTFKINGCISLTSLPNELGNLTSLTTLNMNCCESLTSLPKELGNL 65

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+ L L   +S+  +P+ +  L  L  L +  C +L  LP  +  L SL TLN+SGC 
Sbjct: 66  TSLTTLDLSQCSSLTSLPNELGNLSSLTTLDMGWCSSLTSLPKELGNLISLTTLNISGCG 125

Query: 135 KLENVPDTLGKVESLEELDVSGTA--------IRRPTSSIFL-MKNLRSLYFSGCNEPPA 185
            L ++P  LG + SL  L++SG          +   TS   L M   RSL     N    
Sbjct: 126 SLTSLPKELGNLISLTTLNISGCGSLTSLPNELGNLTSLTTLNMNECRSLTLLPKNFGNL 185

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           ++   LH+       + C     LP+ L  +  L  L+++ C L   ++P++  NL SL 
Sbjct: 186 TSLTTLHM-------NGCISLKSLPNELGNLTYLITLNINGC-LSLPSLPNEFGNLTSLT 237

Query: 245 ELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVT 300
            LY++  ++ ++LP     L++L  L ++ CK L SLP    NL  +     +G SSL++
Sbjct: 238 TLYISECSSLMSLPNEFGNLISLTTLYMQSCKSLSSLPNEFGNLTSLTTLYISGFSSLIS 297

Query: 301 L 301
           L
Sbjct: 298 L 298



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 29/286 (10%)

Query: 2   ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++  L+ LY+ G +S+  +P+ +  L  L +L +  C +L SLP  + +L  L  L ++
Sbjct: 279 GNLTSLTTLYISGFSSLISLPNELSNLISLTILYINECSSLISLPKELGNLTSLTILNMN 338

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           GC+ L   P+ + ++  L+ L +    S+  +P+ +  L  L  L +  CK L  LP+ +
Sbjct: 339 GCTSLTSLPKELGNLISLTTLNIQWCKSLISLPNELGNLTSLTTLKMECCKGLTSLPNEL 398

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYF 177
             L SL +LN++GC  L ++P  LG    L  LD++G  + I  P      + NL SL  
Sbjct: 399 GNLTSLTSLNMTGCLSLTSLPRELGNFTLLTILDMNGCISLISLPKE----LGNLTSLT- 453

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                   +  W   L       +S P+      L  + SLT L+++ C     ++P+++
Sbjct: 454 ------TLNMEWCKSL-------TSLPIE-----LGNLTSLTTLNMNGCT-SLKSLPNEL 494

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            NL  L  L +N  ++  +LP  +  L++L  L ++ CK L SLP 
Sbjct: 495 GNLTYLTTLNMNGCSSLTSLPNELGNLISLTTLNIQWCKSLISLPN 540



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 61/312 (19%)

Query: 39  KNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           K+L+SLP  +S+L  L T +++GC  L   P  + ++  L+ L +               
Sbjct: 5   KSLTSLPKELSNLIFLTTFKINGCISLTSLPNELGNLTSLTTLNM--------------- 49

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV---- 154
                   N C++L  LP  +  L SL TL+LS C  L ++P+ LG + SL  LD+    
Sbjct: 50  --------NCCESLTSLPKELGNLTSLTTLDLSQCSSLTSLPNELGNLSSLTTLDMGWCS 101

Query: 155 SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
           S T++ +   ++    +L +L  SGC    +       LP                 L  
Sbjct: 102 SLTSLPKELGNLI---SLTTLNISGCGSLTS-------LP---------------KELGN 136

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLEELELED 273
           + SLT L++S CG    ++P+++ NL SL  L +N    +T LP +   L +L  L +  
Sbjct: 137 LISLTTLNISGCG-SLTSLPNELGNLTSLTTLNMNECRSLTLLPKNFGNLTSLTTLHMNG 195

Query: 274 CKRLQSLPQIPPNLQF---VRANGCSSLVTL---FGALKLCRSKYTIINCIDSLKLLRKN 327
           C  L+SLP    NL +   +  NGC SL +L   FG L    + Y I  C   + L  + 
Sbjct: 196 CISLKSLPNELGNLTYLITLNINGCLSLPSLPNEFGNLTSLTTLY-ISECSSLMSLPNEF 254

Query: 328 GLAISMLREYLE 339
           G  IS+   Y++
Sbjct: 255 GNLISLTTLYMQ 266



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 51/284 (17%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L ++G TS+T +P  +  L  L  L ++ CK+L SLP  + +L  L TL++
Sbjct: 326 LGNLTSLTILNMNGCTSLTSLPKELGNLISLTTLNIQWCKSLISLPNELGNLTSLTTLKM 385

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  L   P  + ++  L+ L + G  S+  +P  +     L +L +N C +L+ LP  
Sbjct: 386 ECCKGLTSLPNELGNLTSLTSLNMTGCLSLTSLPRELGNFTLLTILDMNGCISLISLPKE 445

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  L SL TLN+  C  L ++P  LG + SL  L+++G T+++   + +  +  L +L  
Sbjct: 446 LGNLTSLTTLNMEWCKSLTSLPIELGNLTSLTTLNMNGCTSLKSLPNELGNLTYLTTLNM 505

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           +GC+                                   SLT L            P+++
Sbjct: 506 NGCS-----------------------------------SLTSL------------PNEL 518

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSL 280
            NL SL  L +    + ++LP  +  L +L  L++E CK L SL
Sbjct: 519 GNLISLTTLNIQWCKSLISLPNELGNLTSLTTLKMECCKGLTSL 562



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 5/163 (3%)

Query: 645 GNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           G CS L     E  +++ +    +S    +  L   +  L  L  L ++GC +L  LP  
Sbjct: 98  GWCSSLTSLPKELGNLISLTTLNISGCGSLTSLPKELGNLISLTTLNISGCGSLTSLPNE 157

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           +  L  L+TLN++        P+   +   L  +H+ G  +++ LP  +  L+  I  N+
Sbjct: 158 LGNLTSLTTLNMNECRSLTLLPKNFGNLTSLTTLHMNGCISLKSLPNELGNLTYLITLNI 217

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             C +L SLP+    L SL  +Y S CS L ++    G + SL
Sbjct: 218 NGCLSLPSLPNEFGNLTSLTTLYISECSSLMSLPNEFGNLISL 260



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 23/225 (10%)

Query: 598 INSMVSQAKAISQQGQFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEF 657
           IN  +S     ++ G    + +++  C                P+E GN + L       
Sbjct: 25  INGCISLTSLPNELGNLTSLTTLNMNCCESLTSL---------PKELGNLTSL------- 68

Query: 658 PDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSK 717
                 LS  + +  L   +  L  L  L +  C +L  LP+ +  L  L+TLN+SG   
Sbjct: 69  --TTLDLSQCSSLTSLPNELGNLSSLTTLDMGWCSSLTSLPKELGNLISLTTLNISGCGS 126

Query: 718 FREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
               P+   +   L  +++ G  ++  LP  +  L+     N+ +C++L  LP     L 
Sbjct: 127 LTSLPKELGNLISLTTLNISGCGSLTSLPNELGNLTSLTTLNMNECRSLTLLPKNFGNLT 186

Query: 777 SLRMMYPSGCSKLKNVTETLGKVE---SLEVRLSSWNRPKMQNDF 818
           SL  ++ +GC  LK++   LG +    +L +     + P + N+F
Sbjct: 187 SLTTLHMNGCISLKSLPNELGNLTYLITLNIN-GCLSLPSLPNEF 230



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 9/135 (6%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-G 738
           L  L  L + GC +L  LPR +     L+ L+++G       P+   +   L  +++E  
Sbjct: 401 LTSLTSLNMTGCLSLTSLPRELGNFTLLTILDMNGCISLISLPKELGNLTSLTTLNMEWC 460

Query: 739 TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            ++  LP  IEL  GN+ S    N+  C +LKSLP+ +  L  L  +  +GCS L ++  
Sbjct: 461 KSLTSLP--IEL--GNLTSLTTLNMNGCTSLKSLPNELGNLTYLTTLNMNGCSSLTSLPN 516

Query: 795 TLGKVESLEVRLSSW 809
            LG + SL      W
Sbjct: 517 ELGNLISLTTLNIQW 531



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 12/152 (7%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIEL--LFGLVQLTLNGCKNLERLPRTISALK 705
           + L  E   F  ++ +L     I  +SL  EL  L  L  L +  CK+L  LP  +  L 
Sbjct: 416 TSLPRELGNF-TLLTILDMNGCISLISLPKELGNLTSLTTLNMEWCKSLTSLPIELGNLT 474

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS----NLK 760
            L+TLN++G +  +  P    +   L  +++ G +++  LP  +    GN++S    N++
Sbjct: 475 SLTTLNMNGCTSLKSLPNELGNLTYLTTLNMNGCSSLTSLPNEL----GNLISLTTLNIQ 530

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            CK+L SLP+ +  L SL  +    C  L ++
Sbjct: 531 WCKSLISLPNELGNLTSLTTLKMECCKGLTSL 562



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L +NGC +L  LP+ +  L  L+TLN+         P    +   L  +++ G T++
Sbjct: 428 LTILDMNGCISLISLPKELGNLTSLTTLNMEWCKSLTSLPIELGNLTSLTTLNMNGCTSL 487

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP  +  L+     N+  C +L SLP+ +  L SL  +    C  L ++   LG + S
Sbjct: 488 KSLPNELGNLTYLTTLNMNGCSSLTSLPNELGNLISLTTLNIQWCKSLISLPNELGNLTS 547

Query: 802 L 802
           L
Sbjct: 548 L 548



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 5/133 (3%)

Query: 671 RELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQ 730
           +ELS    L+F L    +NGC +L  LP  +  L  L+TLN++        P+   +   
Sbjct: 12  KELS---NLIF-LTTFKINGCISLTSLPNELGNLTSLTTLNMNCCESLTSLPKELGNLTS 67

Query: 731 LLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           L  + L + +++  LP  +  LS     ++  C +L SLP  +  L SL  +  SGC  L
Sbjct: 68  LTTLDLSQCSSLTSLPNELGNLSSLTTLDMGWCSSLTSLPKELGNLISLTTLNISGCGSL 127

Query: 790 KNVTETLGKVESL 802
            ++ + LG + SL
Sbjct: 128 TSLPKELGNLISL 140



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 19/220 (8%)

Query: 598 INSMVSQAKAISQQGQFVKM----ISVDSGCMSCYKKWGR----QTVRRQSPQEPGNCSR 649
           IN  +S     ++ G    +    IS  S  MS   ++G      T+  QS      C  
Sbjct: 217 INGCLSLPSLPNEFGNLTSLTTLYISECSSLMSLPNEFGNLISLTTLYMQS------CKS 270

Query: 650 LWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           L    +EF ++  +    +S  + +  L   +  L  L  L +N C +L  LP+ +  L 
Sbjct: 271 LSSLPNEFGNLTSLTTLYISGFSSLISLPNELSNLISLTILYINECSSLISLPKELGNLT 330

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKN 764
            L+ LN++G +     P+   +   L  ++++   ++  LP  +  L+      ++ CK 
Sbjct: 331 SLTILNMNGCTSLTSLPKELGNLISLTTLNIQWCKSLISLPNELGNLTSLTTLKMECCKG 390

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           L SLP+ +  L SL  +  +GC  L ++   LG    L +
Sbjct: 391 LTSLPNELGNLTSLTSLNMTGCLSLTSLPRELGNFTLLTI 430



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 82/224 (36%), Gaps = 65/224 (29%)

Query: 598 INSMVSQAKAISQQGQFVKMISVD-SGCMSCYKKWGRQTVRRQSPQEPGN---------- 646
           +N  +S     ++ G    +I+++ +GC+S              P E GN          
Sbjct: 193 MNGCISLKSLPNELGNLTYLITLNINGCLS----------LPSLPNEFGNLTSLTTLYIS 242

Query: 647 -CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
            CS L    +EF +++                     L  L +  CK+L  LP     L 
Sbjct: 243 ECSSLMSLPNEFGNLIS--------------------LTTLYMQSCKSLSSLPNEFGNLT 282

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L+TL +SG S     P   S+   L  +++                        +C +L
Sbjct: 283 SLTTLYISGFSSLISLPNELSNLISLTILYI-----------------------NECSSL 319

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
            SLP  +  L SL ++  +GC+ L ++ + LG + SL      W
Sbjct: 320 ISLPKELGNLTSLTILNMNGCTSLTSLPKELGNLISLTTLNIQW 363



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L +NGC +L  LP+ +  L  L+TLN+         P    +   L  + +E  
Sbjct: 329 LTSLTILNMNGCTSLTSLPKELGNLISLTTLNIQWCKSLISLPNELGNLTSLTTLKMECC 388

Query: 740 -AIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             +  LP  +    GN+ S    N+  C +L SLP  +     L ++  +GC  L ++ +
Sbjct: 389 KGLTSLPNEL----GNLTSLTSLNMTGCLSLTSLPRELGNFTLLTILDMNGCISLISLPK 444

Query: 795 TLGKVESLEVRLSSW 809
            LG + SL      W
Sbjct: 445 ELGNLTSLTTLNMEW 459


>gi|302398837|gb|ADL36713.1| HD domain class transcription factor [Malus x domestica]
          Length = 570

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 43/335 (12%)

Query: 56  TLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           ++   GC  L+K P +  S  +L  L L D  S+ EV  S+  L  L  L LN C  L R
Sbjct: 252 SMNFRGCEFLEKIPDLSGS-PNLKHLVLSDCKSLVEVDDSVGFLDKLVYLNLNGCSKLKR 310

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTL-GKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
             + + GL+SL+ L L GC +L + P+   GK++SL +LD+  + IR   SSI  +  L+
Sbjct: 311 FATRL-GLRSLEWLYLKGCTRLGSFPEIEEGKMKSLTDLDIRQSGIRELPSSIAYLTGLQ 369

Query: 174 SLYFSGCNEPPASASWHLHLPFNLL----GK-----------------SSC-PVALMLPS 211
            L  + C     ++  H++   +L+    GK                 SSC  + L LP+
Sbjct: 370 RLKANECENLTGTSLHHIYGLQDLIQVHFGKCPKLVTFGNHKVKFDEVSSCNSITLALPN 429

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L        LDL  C L E+     +    +L  L L+ NNFV+LP  I   +NL +L L
Sbjct: 430 LFD------LDLGGCNLSESDFLVPL-GCWALASLDLSGNNFVSLPDCIDKFVNLMKLRL 482

Query: 272 EDCKRLQSLPQI-PPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLA 330
             C+RL+ +PQ+ PP+L  +  + C+SL  +   L        + NCI      + +G  
Sbjct: 483 SGCRRLRKIPQVLPPSLCDLYLDDCTSLEKI-PELPPMLEHLELTNCI------KLSGHE 535

Query: 331 ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMY 365
           ++ L+    L   S+ G +L ++ P +++ KW  Y
Sbjct: 536 VAKLKNNW-LNEESERG-ELQVILPDNEVQKWPSY 568



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 22/160 (13%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPV-TISSLKCLRTLELS 60
             MK L+DL +  + I E+PSSI  LTGL+ L    C+NL+   +  I  L+ L  +   
Sbjct: 340 GKMKSLTDLDIRQSGIRELPSSIAYLTGLQRLKANECENLTGTSLHHIYGLQDLIQVHFG 399

Query: 61  GCSKLKKFPQ-------------IVASMEDLSKLYLDGTSIAE----VPSSIELLPGLEL 103
            C KL  F               I  ++ +L  L L G +++E    VP     L  L+L
Sbjct: 400 KCPKLVTFGNHKVKFDEVSSCNSITLALPNLFDLDLGGCNLSESDFLVPLGCWALASLDL 459

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
                  N V LP  I+   +L  L LSGC +L  +P  L
Sbjct: 460 ----SGNNFVSLPDCIDKFVNLMKLRLSGCRRLRKIPQVL 495



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 3/129 (2%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VLSD   + E+  ++  L  LV L LNGC  L+R    +  L+ L  L L G ++   FP
Sbjct: 277 VLSDCKSLVEVDDSVGFLDKLVYLNLNGCSKLKRFATRL-GLRSLEWLYLKGCTRLGSFP 335

Query: 723 EITSSR-DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP-STINGLRSLRM 780
           EI   +   L ++ +  + IR LP+SI  L+G       +C+NL       I GL+ L  
Sbjct: 336 EIEEGKMKSLTDLDIRQSGIRELPSSIAYLTGLQRLKANECENLTGTSLHHIYGLQDLIQ 395

Query: 781 MYPSGCSKL 789
           ++   C KL
Sbjct: 396 VHFGKCPKL 404


>gi|300697477|ref|YP_003748138.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074201|emb|CBJ53746.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum CFBP2957]
          Length = 890

 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 141/297 (47%), Gaps = 42/297 (14%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L  +   + E+   IE L  LE L+LKG KNL +LP  +  L  L  L L     +K
Sbjct: 193 LKKLATEDCDLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLRETG-IK 251

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P +      L +L +D + + ++P+    LP L  L L++ K L  LPSS   L +LK
Sbjct: 252 TLPPM-GEASALQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALK 309

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           TL+L    KLE++P + G++  L+ L ++G  IR    ++  M+   SL      E   +
Sbjct: 310 TLSLQDNPKLESLPQSFGQLSGLQALTLTGNHIR----ALPSMRGASSLQTMTVAE---A 362

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
           A   L   F+ LG                 +L  L LSD  L E  +P+DI NL +LK L
Sbjct: 363 ALEKLPADFSTLG-----------------NLAHLSLSDTKLRE--LPADIGNLQALKTL 403

Query: 247 YLNRNN--FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            L RNN     LPASI  L +LEEL L    R + LP +         NG S L TL
Sbjct: 404 TL-RNNEKLGALPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 137/316 (43%), Gaps = 60/316 (18%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++  L +L L  T + E+PSS   L+ L+ L+L+    L SLP +   L  L+ L L+G 
Sbjct: 281 ALPQLVNLSLSDTKLRELPSSFGNLSALKTLSLQDNPKLESLPQSFGQLSGLQALTLTG- 339

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           + ++  P +  +   L  + +   ++ ++P+    L  L  L L++ K L  LP+ I  L
Sbjct: 340 NHIRALPSMRGA-SSLQTMTVAEAALEKLPADFSTLGNLAHLSLSDTK-LRELPADIGNL 397

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           ++LKTL L    KL  +P ++ ++  LEEL +SG   R                      
Sbjct: 398 QALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRE--------------------- 436

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                                     LPSL G   L  L + +  L  A++P+D D L  
Sbjct: 437 --------------------------LPSLNGASGLKTLTVENTSL--ASLPADFDALRK 468

Query: 243 -LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP----PNLQFVRANGCSS 297
            L +L L+    + LPAS+  L  L  L L    RL++LP        N+Q +  + C  
Sbjct: 469 HLTQLTLSNTQLLELPASVGALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPR 528

Query: 298 LVTL---FGALKLCRS 310
           L TL    GAL   R+
Sbjct: 529 LRTLPQSIGALSNLRT 544



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 104/182 (57%), Gaps = 6/182 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +++ +L+ L L  T + E+P+ I  L  L+ LTL+  + L +LP +I  L  L  L LSG
Sbjct: 372 STLGNLAHLSLSDTKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG 431

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL-PGLELLYLNECKNLVRLPSSIN 120
            ++ ++ P +  +   L  L ++ TS+A +P+  + L   L  L L+  + L+ LP+S+ 
Sbjct: 432 -NRFRELPSLNGA-SGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQ-LLELPASVG 488

Query: 121 GLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
            L  L +L L+   +LE +P D++ ++++++ +D+S    +R    SI  + NLR+L  S
Sbjct: 489 ALSRLTSLTLTKNARLEALPDDSVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLS 548

Query: 179 GC 180
           GC
Sbjct: 549 GC 550



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 50/174 (28%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD T +REL   I  L  L  LTL   + L  LP +I  L +L  L LSG ++FRE P 
Sbjct: 382 LSD-TKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG-NRFRELPS 439

Query: 724 ITSS-----------------------RDQLLEIHLEGTAIRGLPASIELLS-------- 752
           +  +                       R  L ++ L  T +  LPAS+  LS        
Sbjct: 440 LNGASGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQLLELPASVGALSRLTSLTLT 499

Query: 753 ----------------GNI-LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
                            N+ + +L DC  L++LP +I  L +LR +  SGC+ L
Sbjct: 500 KNARLEALPDDSVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLSGCTSL 553



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 7/138 (5%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL--SGLSKFREFPEITS 726
           D+ EL   IE LF L  L+L G KNL+ LP  +  L  LS L L  +G+       E ++
Sbjct: 202 DLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLRETGIKTLPPMGEASA 261

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
               L  + ++ + +  LP     L   +  +L D K L+ LPS+   L +L+ +     
Sbjct: 262 ----LQRLTIDNSPLEKLPTGFTALPQLVNLSLSDTK-LRELPSSFGNLSALKTLSLQDN 316

Query: 787 SKLKNVTETLGKVESLEV 804
            KL+++ ++ G++  L+ 
Sbjct: 317 PKLESLPQSFGQLSGLQA 334



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 657 FPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P +V +    T +REL  +   L  L  L+L     LE LP++   L  L  L L+G +
Sbjct: 282 LPQLVNLSLSDTKLRELPSSFGNLSALKTLSLQDNPKLESLPQSFGQLSGLQALTLTG-N 340

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS-NLKDCKNLKSLPSTINGL 775
             R  P +  +   L  + +   A+  LPA    L GN+   +L D K L+ LP+ I  L
Sbjct: 341 HIRALPSMRGA-SSLQTMTVAEAALEKLPADFSTL-GNLAHLSLSDTK-LRELPADIGNL 397

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKA 835
           ++L+ +      KL  +  ++ ++  LE    S NR +     +        TV   + A
Sbjct: 398 QALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRELPSLNGASGLKTLTVENTSLA 457

Query: 836 ELLRDSDSWKKNVDKCMKLSTT 857
            L  D D+ +K++ + + LS T
Sbjct: 458 SLPADFDALRKHLTQ-LTLSNT 478



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 23  SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK--LKKFPQIV 72
           S+  L  ++++ L  C  L +LP +I +L  LRTL+LSGC+   LK  P  V
Sbjct: 511 SVRRLKNVQMIDLSDCPRLRTLPQSIGALSNLRTLDLSGCTSLTLKDLPHSV 562


>gi|296089383|emb|CBI39202.3| unnamed protein product [Vitis vinifera]
          Length = 596

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 185/445 (41%), Gaps = 64/445 (14%)

Query: 86  TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
           T + ++ SS+  L  L  L    C NL   P  ++ L SL+ LNLSGC KLE  P     
Sbjct: 8   TQLHKIHSSLGDLDKLCRLNFKNCINLEHFPG-LDQLVSLEALNLSGCSKLEKFPVISQP 66

Query: 146 VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
           +  L +L   GTAI    SSI     L  L    C +                       
Sbjct: 67  MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEK----------------------- 103

Query: 206 ALMLPSLTGVCSLTKLD-LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
            L LPS   +C L  L+ LS  G      P             +N +N   LP  +  L 
Sbjct: 104 LLSLPS--SICKLAHLETLSLSGCSRLGKPQ------------VNSDNLDALPRILDRLS 149

Query: 265 NLEELELEDCKRLQSLPQIPPNLQFVRA-NGCSSLVTLF-GALKLCRSKYTIINCIDSLK 322
           +L EL+L+DC+ L++LP +P +++ + A + C+SL  +   ++ LC       NC    K
Sbjct: 150 HLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVFLCFGGSIFGNCFQLTK 209

Query: 323 LLRKNGLAISMLREYLEL--------QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
              K G  +  +  + +         Q   +     S VFPGS IP WFM+ ++G  + +
Sbjct: 210 YQSKMGPHLRRMATHFDQDRWKSAYDQQYPNVQVPFSTVFPGSTIPDWFMHYSKGHEVDI 269

Query: 375 TRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSY---PAHELECSMDGSGEGHYI--Y 429
                 Y+ +  +GFA+  V   PK  + T  + +Y     H+L    +   E  ++  +
Sbjct: 270 DVDPDWYD-SSFLGFALSAVI-APKDGSITRGWSTYCNLDLHDLNSESESESESSWVCSF 327

Query: 430 FRGKFGH-----VVSDHLWLLFLPRH-GHNWQFESNLIRLSFRSISDPTWKVKRCGFHPI 483
              +        + SDHLWL ++P   G N +  S  I+ SF S S  +  VK  G  P+
Sbjct: 328 TDARTCQLEDTTINSDHLWLAYVPSFLGFNDKKWSR-IKFSF-STSRKSCIVKHWGVCPL 385

Query: 484 YMHEVEEFDETTKQSTRFTSCNLNE 508
           Y+    + +           C LNE
Sbjct: 386 YIEGSSDDNYNRDGDYSSGRCCLNE 410



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 82/150 (54%), Gaps = 11/150 (7%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + ++ SS+  L  L  L  K C NL   P  +  L  L  L LSGCSKL+KFP I   
Sbjct: 8   TQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLEALNLSGCSKLEKFPVISQP 66

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M  LSKL  DGT+I E+PSSI     L +L L  C+ L+ LPSSI  L  L+TL+LSGC 
Sbjct: 67  MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCS 126

Query: 135 K----------LENVPDTLGKVESLEELDV 154
           +          L+ +P  L ++  L EL +
Sbjct: 127 RLGKPQVNSDNLDALPRILDRLSHLRELQL 156



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 9/179 (5%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + ++  ++  L  L +L    C NLE  P  +  L  L  LNLSG SK  +FP I+  
Sbjct: 8   TQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLEALNLSGCSKLEKFPVISQP 66

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L ++  +GTAI  LP+SI   +  ++ +L++C+ L SLPS+I  L  L  +  SGCS
Sbjct: 67  MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCS 126

Query: 788 KLKNV---TETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDS 843
           +L      ++ L  +  +  RLS     ++Q   DC    A+  +   +  EL+  SD+
Sbjct: 127 RLGKPQVNSDNLDALPRILDRLSHLRELQLQ---DCRSLRALPPLP--SSMELINASDN 180



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 13/113 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  LS L  DGT+ITE+PSSI   T L +L L+ C+ L SLP +I  L  L TL LSGCS
Sbjct: 67  MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCS 126

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           +L K PQ+            +  ++  +P  ++ L  L  L L +C++L  LP
Sbjct: 127 RLGK-PQV------------NSDNLDALPRILDRLSHLRELQLQDCRSLRALP 166


>gi|242069261|ref|XP_002449907.1| hypothetical protein SORBIDRAFT_05g025450 [Sorghum bicolor]
 gi|241935750|gb|EES08895.1| hypothetical protein SORBIDRAFT_05g025450 [Sorghum bicolor]
          Length = 613

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 148/318 (46%), Gaps = 39/318 (12%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           + I+E+P S   L  +  L + GC  +  LP +   LK +  L++SGCS +++ P+    
Sbjct: 200 SGISELPKSFGDLKSMVRLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESFGD 259

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           ++ +  L + G S I E+P S   L  +  L ++ C  L  LP SI  L  L+ L LSGC
Sbjct: 260 LKSMVHLDMSGCSGIRELPESFGDLNSMVHLDMSGCSGLTELPDSIGNLTHLRHLQLSGC 319

Query: 134 CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
             L  +PDTLGK+ +L+ L++SG ++++     +  ++ L+    S C +        + 
Sbjct: 320 SSLPELPDTLGKLTNLQHLELSGCSSVKAIPEPLCGLRQLQCFNMSRCEQIRELPETLMK 379

Query: 193 LPFNL-LGKSSCPVALMLPSLTGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNR 250
           L   L L  S C     L  +  + +L  LDLS    +G   +   + NL +LK L L+R
Sbjct: 380 LENLLHLDLSRCSSLQHLGGVRDLTALQHLDLSRSWKIGLQDLSGILANLTNLKYLGLSR 439

Query: 251 -------NNFVT----------------------LPASISGLLNLEELELEDCKRLQSLP 281
                     V+                      LPASI  L  L+ L+L  C+ L+SLP
Sbjct: 440 VIISRKIGRIVSHWIGGMTNLEHLDLSWNVGLECLPASIGNLQRLQTLDLTACRGLKSLP 499

Query: 282 QIPPNLQFVRANGCSSLV 299
                 + +RA G  SLV
Sbjct: 500 ------ESIRALGLKSLV 511



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 136/286 (47%), Gaps = 26/286 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  MK L  L         +P  I  L+ L+ L+L G   +S+LP +I  L+ LR +  S
Sbjct: 138 IGRMKQLRCLIAPRMQNDSLPECITELSKLQYLSLNGSTQISALPESIGKLERLRYICFS 197

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           GCS + + P+    ++ + +L + G S I E+P S   L  +  L ++ C  +  LP S 
Sbjct: 198 GCSGISELPKSFGDLKSMVRLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESF 257

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
             LKS+  L++SGC  +  +P++ G + S+  LD+SG + +     SI  + +LR L  S
Sbjct: 258 GDLKSMVHLDMSGCSGIRELPESFGDLNSMVHLDMSGCSGLTELPDSIGNLTHLRHLQLS 317

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           GC+  P        LP + LGK              + +L  L+LS C     AIP  + 
Sbjct: 318 GCSSLP-------ELP-DTLGK--------------LTNLQHLELSGCS-SVKAIPEPLC 354

Query: 239 NLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
            L  L+   ++R      LP ++  L NL  L+L  C  LQ L  +
Sbjct: 355 GLRQLQCFNMSRCEQIRELPETLMKLENLLHLDLSRCSSLQHLGGV 400



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 29/276 (10%)

Query: 11  YLDGTSITEVPS-SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           + D   + ++PS +      L  L    C  +  LP +I  +K LR L ++   +    P
Sbjct: 101 FSDSGGLLDIPSGAFSFAKCLRTLDFSECSGIM-LPASIGRMKQLRCL-IAPRMQNDSLP 158

Query: 70  QIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           + +  +  L  L L+G T I+ +P SI  L  L  +  + C  +  LP S   LKS+  L
Sbjct: 159 ECITELSKLQYLSLNGSTQISALPESIGKLERLRYICFSGCSGISELPKSFGDLKSMVRL 218

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           ++SGC  +  +P++ G ++S+  LD+SG + IR    S   +K++  L  SGC+      
Sbjct: 219 DMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESFGDLKSMVHLDMSGCS------ 272

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                      G    P      S   + S+  LD+S C  G   +P  I NL  L+ L 
Sbjct: 273 -----------GIRELP-----ESFGDLNSMVHLDMSGCS-GLTELPDSIGNLTHLRHLQ 315

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L+  ++   LP ++  L NL+ LEL  C  ++++P+
Sbjct: 316 LSGCSSLPELPDTLGKLTNLQHLELSGCSSVKAIPE 351



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            S  + I EL  +   L  +V+L ++GC  +  LP +   LK +  L++SG S  RE PE
Sbjct: 196 FSGCSGISELPKSFGDLKSMVRLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPE 255

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                  ++ + + G + IR LP S   L+  +  ++  C  L  LP +I  L  LR + 
Sbjct: 256 SFGDLKSMVHLDMSGCSGIRELPESFGDLNSMVHLDMSGCSGLTELPDSIGNLTHLRHLQ 315

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGCS L  + +TLGK+ +L+
Sbjct: 316 LSGCSSLPELPDTLGKLTNLQ 336



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS + E    F D+  +    +S  + IREL  +   L  +V L ++GC  +  LP +  
Sbjct: 199 CSGISELPKSFGDLKSMVRLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESFG 258

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            LK +  L++SG S  RE PE     + ++ + + G + +  LP SI  L+      L  
Sbjct: 259 DLKSMVHLDMSGCSGIRELPESFGDLNSMVHLDMSGCSGLTELPDSIGNLTHLRHLQLSG 318

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           C +L  LP T+  L +L+ +  SGCS +K + E L  +  L+
Sbjct: 319 CSSLPELPDTLGKLTNLQHLELSGCSSVKAIPEPLCGLRQLQ 360



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L+LNG   +  LP +I  L+ L  +  SG S   E P+       ++ + + G + I
Sbjct: 167 LQYLSLNGSTQISALPESIGKLERLRYICFSGCSGISELPKSFGDLKSMVRLDMSGCSGI 226

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           R LP S   L   +  ++  C  ++ LP +   L+S+  +  SGCS ++ + E+ G + S
Sbjct: 227 RELPESFGDLKSMVHLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESFGDLNS 286

Query: 802 L 802
           +
Sbjct: 287 M 287



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSG 753
           + LP  I+ L  L  L+L+G ++    PE     ++L  I   G + I  LP S   L  
Sbjct: 155 DSLPECITELSKLQYLSLNGSTQISALPESIGKLERLRYICFSGCSGISELPKSFGDLKS 214

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +  ++  C  ++ LP +   L+S+  +  SGCS ++ + E+ G ++S+
Sbjct: 215 MVRLDMSGCSGIRELPESFGDLKSMVHLDMSGCSGIRELPESFGDLKSM 263



 Score = 39.7 bits (91), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 24/142 (16%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L E  D   ++  +    LS  + + EL   +  L  L  L L+GC +++ +P  + 
Sbjct: 295 CSGLTELPDSIGNLTHLRHLQLSGCSSLPELPDTLGKLTNLQHLELSGCSSVKAIPEPLC 354

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEI---------HLEG----TAIRGLPAS-- 747
            L+ L   N+S   + RE PE     + LL +         HL G    TA++ L  S  
Sbjct: 355 GLRQLQCFNMSRCEQIRELPETLMKLENLLHLDLSRCSSLQHLGGVRDLTALQHLDLSRS 414

Query: 748 ----IELLSGNILSNLKDCKNL 765
               ++ LSG IL+NL + K L
Sbjct: 415 WKIGLQDLSG-ILANLTNLKYL 435


>gi|20198191|gb|AAD25848.3| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 554

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 146/279 (52%), Gaps = 14/279 (5%)

Query: 24  IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
           I+ L  L+ + L   KNL  LP  +SS   L  L L+GCS L + P  + +   L KL L
Sbjct: 9   IQPLRNLKRMDLFSSKNLKELP-DLSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLEL 67

Query: 84  DG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
            G +S+ E+PSSI     L+ +  + C+NLV LPSSI    +LK L+LS C  L+ +P +
Sbjct: 68  SGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSS 127

Query: 143 LGKVESLEELD-VSGTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLL 198
           +G   +L++L  +  ++++   SSI    NL+ L+ + C+   + P+S    ++L   +L
Sbjct: 128 IGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLEKLIL 187

Query: 199 GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI--PSDIDNLHSLKELYLNR-NNFVT 255
             + C   + LPS  G    T L + + G     +  PS I NLH L EL L        
Sbjct: 188 --AGCESLVELPSFIG--KATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKLQV 243

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
           LP +I+ L  L EL+L DC  L++ P I  N++ +   G
Sbjct: 244 LPTNIN-LEFLNELDLTDCILLKTFPVISTNIKRLHLRG 281



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 188/399 (47%), Gaps = 44/399 (11%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + +   L  L L G +S+ E+PSSI     L+ +    C+NL  LP +I +   L+ L+L
Sbjct: 56  IGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDL 115

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S CS LK+ P  + +  +L KL+L   +S+ E+PSSI     L+ L+L  C +L++LPSS
Sbjct: 116 SCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSS 175

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           I    +L+ L L+GC  L  +P  +GK  +L+ L++   + +    S I  +  L  L  
Sbjct: 176 IGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLSELRL 235

Query: 178 SGCNEPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            GC +     + +++L F N L  + C +    P ++   ++ +L L    + E  +PS 
Sbjct: 236 RGCKKLQVLPT-NINLEFLNELDLTDCILLKTFPVIST--NIKRLHLRGTQIEE--VPSS 290

Query: 237 IDN---LHSLKELY------------------LNRNNFVTLPASISGLLNLEELELEDCK 275
           + +   L  L+ LY                  L+  N   +   ++ +  L  L+L  C 
Sbjct: 291 LRSWPRLEDLQMLYSENLSEFSHVLERITVLELSDINIREMTPWLNRITRLRRLKLSGCG 350

Query: 276 RLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR 335
           +L SLPQ+  +L  + A  C SL  L      C      I C+D    L+ +  A  ++ 
Sbjct: 351 KLVSLPQLSDSLIILDAENCGSLERLG-----CSFNNPNIKCLDFTNCLKLDKEARDLI- 404

Query: 336 EYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
               +QA +    +   + P  ++ ++   +  GSS+TV
Sbjct: 405 ----IQATA----RHYSILPSREVHEYITNRAIGSSLTV 435



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 113/246 (45%), Gaps = 34/246 (13%)

Query: 64  KLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           KL+K  + +  + +L ++ L    ++ E+P  +     LE+L LN C +LV LP SI   
Sbjct: 1   KLEKLWEEIQPLRNLKRMDLFSSKNLKELPD-LSSATNLEVLNLNGCSSLVELPFSIGNA 59

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSGC 180
             L  L LSGC  L  +P ++G   +L+ +D S     +  P SSI    NL+ L  S C
Sbjct: 60  TKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELP-SSIGNATNLKELDLSCC 118

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-LTKLDLSDCGLGEAAIPSDIDN 239
           +                           LPS  G C+ L KL L  C      +PS I N
Sbjct: 119 SSLKE-----------------------LPSSIGNCTNLKKLHLICCS-SLKELPSSIGN 154

Query: 240 LHSLKELYLN-RNNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGC 295
             +LKEL+L   ++ + LP+SI   +NLE+L L  C+ L  LP       NL+ +     
Sbjct: 155 CTNLKELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYL 214

Query: 296 SSLVTL 301
           S LV L
Sbjct: 215 SCLVEL 220



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 26/165 (15%)

Query: 656 EFPDIVQVLSDGTDIRELSL-----AIELLFG------LVQLTLNGCKNLERLPRTISAL 704
           E PD    LS  T++  L+L      +EL F       L++L L+GC +L  LP +I   
Sbjct: 28  ELPD----LSSATNLEVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNA 83

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-- 761
             L T++ S      E P    +   L E+ L   ++++ LP+SI    GN  +NLK   
Sbjct: 84  INLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPSSI----GNC-TNLKKLH 138

Query: 762 ---CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              C +LK LPS+I    +L+ ++ + CS L  +  ++G   +LE
Sbjct: 139 LICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAINLE 183



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL  +I     L  +  + C+NL  LP +I     L  L+LS  S  +E P 
Sbjct: 67  LSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSIGNATNLKELDLSCCSSLKELPS 126

Query: 724 ITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRS 777
              +   L ++HL   ++++ LP+SI    GN  +NLK+     C +L  LPS+I    +
Sbjct: 127 SIGNCTNLKKLHLICCSSLKELPSSI----GNC-TNLKELHLTCCSSLIKLPSSIGNAIN 181

Query: 778 LRMMYPSGCSKLKNVTETLGKVESLEV 804
           L  +  +GC  L  +   +GK  +L++
Sbjct: 182 LEKLILAGCESLVELPSFIGKATNLKI 208



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 25/121 (20%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L +L L GCK L+ LP  I+ L++L+ L+L+     + FP I+++  +L   HL GT
Sbjct: 227 LHKLSELRLRGCKKLQVLPTNIN-LEFLNELDLTDCILLKTFPVISTNIKRL---HLRGT 282

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            I  +P+S                 L+S P     L  L+M+Y    S+  +V E +  +
Sbjct: 283 QIEEVPSS-----------------LRSWPR----LEDLQMLYSENLSEFSHVLERITVL 321

Query: 800 E 800
           E
Sbjct: 322 E 322



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 638 RQSPQEPGNCSRLWEE----ADEFPDIVQVLSDGTDIRELSL-----------AIELLFG 682
           ++ P   GNC+ L +          ++   + + T+++EL L           +I     
Sbjct: 122 KELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLKELHLTCCSSLIKLPSSIGNAIN 181

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L L GC++L  LP  I     L  LNL  LS   E P    +  +L E+ L G   +
Sbjct: 182 LEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLSELRLRGCKKL 241

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           + LP +I L   N L +L DC  LK+ P     ++ L +
Sbjct: 242 QVLPTNINLEFLNEL-DLTDCILLKTFPVISTNIKRLHL 279


>gi|296089376|emb|CBI39195.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 200/498 (40%), Gaps = 115/498 (23%)

Query: 38  CKNLSSLPVTISSL----------KCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-T 86
           CKNL  L +  S L          + L+ ++LS    L + P   + + +L  L LDG T
Sbjct: 50  CKNLVCLSMPNSHLTQLWEGNKVFENLKYMDLSHSQYLTETPDF-SRVTNLKMLILDGCT 108

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
            + ++  S+  L  L  L L  C NL   PS I  L SL+ L LSGC KLE  PD    +
Sbjct: 109 QLCKIHPSLGDLDKLARLSLKNCINLEHFPS-IGQLVSLEDLILSGCSKLEKFPDIFQHM 167

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
             L +L + GTA     SSI     L  L                       G  +C   
Sbjct: 168 PCLWKLCLDGTATTELPSSIGYATELVRL-----------------------GLKNCRKL 204

Query: 207 LMLPSLTG----VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
             LPS  G    + +L+    SD G  E                 +N  N   LP ++  
Sbjct: 205 RSLPSSIGKLTLLETLSLSGCSDLGKCE-----------------VNSGNLDALPRTLDQ 247

Query: 263 LLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL-----VTLFGALKLCRSKYTIINC 317
           L +L  LEL++C+ L++LP +P +L+ + A+ C SL       +F   + C       NC
Sbjct: 248 LCSLWRLELQNCRSLRALPALPSSLEIINASNCESLEDISPQAVFSQFRSC----MFGNC 303

Query: 318 IDSLKLLRKNGLAISMLREYLELQAVSDP-GHKL----------------SIVFPGSQIP 360
           +   K   +      M R   +LQ+++ P  H++                S VFPGS IP
Sbjct: 304 LKLTKFQSR------MER---DLQSMAAPVDHEIQPSTFEEQNPEVPVLFSTVFPGSGIP 354

Query: 361 KWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMD 420
            WF +++EG  I +      Y  N  +GFA+  V   P+    T  + +Y      C + 
Sbjct: 355 DWFEHRSEGHEINIQVSQNWYTSN-FLGFALSAVV-APEKEPLTSGWKTY------CDLG 406

Query: 421 GSGEGHYIYFRGKFGHVV--------------SDHLWLLFLPRHGHNWQFESNLIRLSFR 466
                  +   G F   +              SDH WL ++P        + + I+ SFR
Sbjct: 407 CGAPNSKLKSNGIFSFSIVDDSTELLEHITIGSDHWWLAYVPSFIGFAPEKWSCIKFSFR 466

Query: 467 SISDPTWKVKRCGFHPIY 484
           +  + +  VK CG  P+Y
Sbjct: 467 TDRE-SCIVKCCGVCPVY 483



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/150 (43%), Positives = 83/150 (55%), Gaps = 2/150 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + + +L  L LDG T + ++  S+  L  L  L+LK C NL   P +I  L  L  L L
Sbjct: 93  FSRVTNLKMLILDGCTQLCKIHPSLGDLDKLARLSLKNCINLEHFP-SIGQLVSLEDLIL 151

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKL+KFP I   M  L KL LDGT+  E+PSSI     L  L L  C+ L  LPSSI
Sbjct: 152 SGCSKLEKFPDIFQHMPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCRKLRSLPSSI 211

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
             L  L+TL+LSGC  L       G +++L
Sbjct: 212 GKLTLLETLSLSGCSDLGKCEVNSGNLDAL 241



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 89/171 (52%), Gaps = 11/171 (6%)

Query: 656 EFPDIVQVLS------DG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           E PD  +V +      DG T + ++  ++  L  L +L+L  C NLE  P +I  L  L 
Sbjct: 89  ETPDFSRVTNLKMLILDGCTQLCKIHPSLGDLDKLARLSLKNCINLEHFP-SIGQLVSLE 147

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
            L LSG SK  +FP+I      L ++ L+GTA   LP+SI   +  +   LK+C+ L+SL
Sbjct: 148 DLILSGCSKLEKFPDIFQHMPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCRKLRSL 207

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV---RLSSWNRPKMQN 816
           PS+I  L  L  +  SGCS L       G +++L     +L S  R ++QN
Sbjct: 208 PSSIGKLTLLETLSLSGCSDLGKCEVNSGNLDALPRTLDQLCSLWRLELQN 258



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 16/136 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L  L LDGT+ TE+PSSI   T L  L LK C+ L SLP +I  L  L TL LSGCS
Sbjct: 167 MPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCRKLRSLPSSIGKLTLLETLSLSGCS 226

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
                        DL K  ++  ++  +P +++ L  L  L L  C++L  LP+  +   
Sbjct: 227 -------------DLGKCEVNSGNLDALPRTLDQLCSLWRLELQNCRSLRALPALPS--- 270

Query: 124 SLKTLNLSGCCKLENV 139
           SL+ +N S C  LE++
Sbjct: 271 SLEIINASNCESLEDI 286



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 27/154 (17%)

Query: 647 CSRLWEEADEFPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CS+L +    FPDI Q +        DGT   EL  +I     LV+L L  C+ L  LP 
Sbjct: 154 CSKLEK----FPDIFQHMPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCRKLRSLPS 209

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL 759
           +I  L  L TL+LSG S              L +  +    +  LP +++ L       L
Sbjct: 210 SIGKLTLLETLSLSGCS-------------DLGKCEVNSGNLDALPRTLDQLCSLWRLEL 256

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           ++C++L++LP+  +   SL ++  S C  L++++
Sbjct: 257 QNCRSLRALPALPS---SLEIINASNCESLEDIS 287


>gi|168033677|ref|XP_001769341.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679447|gb|EDQ65895.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 308

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 158/290 (54%), Gaps = 9/290 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  L  LE L L GC +L +LP  + +L  LR L+LS CS L   P  +A+
Sbjct: 20  SSLTSLPNELANLFSLEELYLNGCSSLINLPNELVNLSYLRKLDLSYCSSLTILPNKLAN 79

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L  LYL+  S +  +P+ +  L  LE L+L++C +L  LP+    L SLK L LSGC
Sbjct: 80  ISSLQSLYLNSCSRLISLPNELTNLYTLEALHLSDCLSLTHLPNECTNLSSLKELVLSGC 139

Query: 134 CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
             L + P+ L  +  L  L++SG ++++   + +  + +L++ Y SGC+   +  +   +
Sbjct: 140 SSLISFPNELANLSFLTRLNLSGCSSLKSLPNELANLSSLKAFYLSGCSSLTSLPNELAN 199

Query: 193 L-PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
           L    +L  S C     LP+ L  + SLT+LDLS C    A++P+++ NL SL  L L+ 
Sbjct: 200 LSSLIILDLSGCSTLTSLPNKLKNLFSLTRLDLSGCS-SLASLPNELANLSSLTSLNLSH 258

Query: 251 -NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---FVRANGCS 296
            +   +LP  ++ L +L  L L  C  L SLP    NL     +  +GCS
Sbjct: 259 CSRLTSLPNELANLSSLTILNLSCCSSLTSLPNEFANLSSLTILDLSGCS 308



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 1/133 (0%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+T +P+    L+ L+ L L GC +L S P  +++L  L  L LSGCS LK  P  +
Sbjct: 114 DCLSLTHLPNECTNLSSLKELVLSGCSSLISFPNELANLSFLTRLNLSGCSSLKSLPNEL 173

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           A++  L   YL G +S+  +P+ +  L  L +L L+ C  L  LP+ +  L SL  L+LS
Sbjct: 174 ANLSSLKAFYLSGCSSLTSLPNELANLSSLIILDLSGCSTLTSLPNKLKNLFSLTRLDLS 233

Query: 132 GCCKLENVPDTLG 144
           GC  L ++P+ L 
Sbjct: 234 GCSSLASLPNELA 246



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 5/158 (3%)

Query: 645 GNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
            +CSRL    +E  ++  +    LSD   +  L      L  L +L L+GC +L   P  
Sbjct: 89  NSCSRLISLPNELTNLYTLEALHLSDCLSLTHLPNECTNLSSLKELVLSGCSSLISFPNE 148

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           ++ L +L+ LNLSG S  +  P   ++   L   +L G +++  LP  +  LS  I+ +L
Sbjct: 149 LANLSFLTRLNLSGCSSLKSLPNELANLSSLKAFYLSGCSSLTSLPNELANLSSLIILDL 208

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             C  L SLP+ +  L SL  +  SGCS L ++   L 
Sbjct: 209 SGCSTLTSLPNKLKNLFSLTRLDLSGCSSLASLPNELA 246



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELEL 271
           T + SL  LD+S C     ++P+++ NL SL+ELYLN  ++ + LP  +  L  L +L+L
Sbjct: 6   TNITSLKTLDMSGCS-SLTSLPNELANLFSLEELYLNGCSSLINLPNELVNLSYLRKLDL 64

Query: 272 EDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
             C  L  LP    N   LQ +  N CS L++L
Sbjct: 65  SYCSSLTILPNKLANISSLQSLYLNSCSRLISL 97



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 1/121 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           LF L +L LNGC +L  LP  +  L YL  L+LS  S     P   ++   L  ++L   
Sbjct: 32  LFSLEELYLNGCSSLINLPNELVNLSYLRKLDLSYCSSLTILPNKLANISSLQSLYLNSC 91

Query: 740 A-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + +  LP  +  L      +L DC +L  LP+    L SL+ +  SGCS L +    L  
Sbjct: 92  SRLISLPNELTNLYTLEALHLSDCLSLTHLPNECTNLSSLKELVLSGCSSLISFPNELAN 151

Query: 799 V 799
           +
Sbjct: 152 L 152



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 5/163 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  +    LS  + ++ L   +  L  L    L+GC +L  LP  ++
Sbjct: 139 CSSLISFPNELANLSFLTRLNLSGCSSLKSLPNELANLSSLKAFYLSGCSSLTSLPNELA 198

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L  L+LSG S     P    +   L  + L G +++  LP  +  LS     NL  
Sbjct: 199 NLSSLIILDLSGCSTLTSLPNKLKNLFSLTRLDLSGCSSLASLPNELANLSSLTSLNLSH 258

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           C  L SLP+ +  L SL ++  S CS L ++      + SL +
Sbjct: 259 CSRLTSLPNELANLSSLTILNLSCCSSLTSLPNEFANLSSLTI 301


>gi|224133498|ref|XP_002328057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222837466|gb|EEE75845.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1187

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 181/418 (43%), Gaps = 65/418 (15%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           S ++L       + + ++ S  + L  L+ + L   + L+ LP  +S    L  + LSGC
Sbjct: 607 SAENLVQFDFSESKVEKLWSGKQNLLNLKAINLSSSRCLTELP-DLSKAINLEYINLSGC 665

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             LK+                       VPSS + L  L+ L L +C NL+ LP  I+  
Sbjct: 666 ESLKR-----------------------VPSSFQHLEKLKCLDLTDCHNLITLPRRIDS- 701

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK------------ 170
           K L+ L ++GC  + N P+T   +     LD+SGT++ +   SI L +            
Sbjct: 702 KCLEQLFITGCSNVRNCPETYADIGY---LDLSGTSVEKVPLSIKLRQISLIGCKNITKF 758

Query: 171 -----NLRSLYF--SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD- 222
                N+R L    +   E P+S  +   L    L    C     LPS   +C L  L+ 
Sbjct: 759 PVISENIRVLLLDRTAIEEVPSSIEFLTKLV--SLHMFDCKRLSKLPS--SICKLKFLEN 814

Query: 223 --LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
             LS C   E   P     + SLK LYL R     LP+SI    +L  LEL D   ++ L
Sbjct: 815 FYLSGCSKLE-TFPEIKRPMKSLKTLYLGRTAIKKLPSSIRHQKSLIFLEL-DGASMKEL 872

Query: 281 PQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL 340
            ++PP+L  + A  C SL T+         +  + NC        +N +   M    L++
Sbjct: 873 LELPPSLCILSARDCESLETISSGTLSQSIRLNLANCFR----FDQNAIMEDM---QLKI 925

Query: 341 QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP 398
           Q+  + G    I+ PGS+IP WF+ ++ GSS+ +  PS  + + K + F +     VP
Sbjct: 926 QS-GNIGDMFQILSPGSEIPHWFINRSWGSSVAIQLPSDCHKL-KAIAFCLIVHHTVP 981



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 51/90 (56%)

Query: 659 DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF 718
           +I  +L D T I E+  +IE L  LV L +  CK L +LP +I  LK+L    LSG SK 
Sbjct: 764 NIRVLLLDRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGCSKL 823

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASI 748
             FPEI      L  ++L  TAI+ LP+SI
Sbjct: 824 ETFPEIKRPMKSLKTLYLGRTAIKKLPSSI 853



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 19/138 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLS----------------TLNLSGLSKFREFPEITS 726
           L QL + GC N+   P T + + YL                  ++L G     +FP I+ 
Sbjct: 704 LEQLFITGCSNVRNCPETYADIGYLDLSGTSVEKVPLSIKLRQISLIGCKNITKFPVISE 763

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           +   LL   L+ TAI  +P+SIE L+  +  ++ DCK L  LPS+I  L+ L   Y SGC
Sbjct: 764 NIRVLL---LDRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLPSSICKLKFLENFYLSGC 820

Query: 787 SKLKNVTETLGKVESLEV 804
           SKL+   E    ++SL+ 
Sbjct: 821 SKLETFPEIKRPMKSLKT 838


>gi|22325729|ref|NP_179298.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251488|gb|AEC06582.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1195

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 217/503 (43%), Gaps = 98/503 (19%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            ++  L L+G   +  +P  ++ +  L  L L GC  L SLP     LK L+TL LS C  
Sbjct: 705  NIRRLNLEGCIELKTLPQEMQEMESLIYLNLGGCTRLVSLPEF--KLKSLKTLILSHCKN 762

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
             ++FP I   +E    LYL GT+I  +P+SIE                         L+ 
Sbjct: 763  FEQFPVISECLE---ALYLQGTAIKCIPTSIE------------------------NLQK 795

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLYFSGCNEP 183
            L  L+L  C  L ++PD LG + SL+EL +SG +  +    +   MK+++ L   G    
Sbjct: 796  LILLDLKDCEVLVSLPDCLGNLRSLQELILSGCSKLKFFPELKETMKSIKILLLDG---- 851

Query: 184  PASASWHLHLPFNLLGKSSCPVA-LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
              +A   + +    +      VA   LP+     SL+   L    L      +DI++LH 
Sbjct: 852  --TAIKQMPILLQCIQSQGHSVANKTLPN-----SLSDYYLPSSLLSLCLSGNDIESLH- 903

Query: 243  LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
                           A+IS L +L+ L+L++CK+L+S+  +PPNL+ + A+GC SL  + 
Sbjct: 904  ---------------ANISQLYHLKWLDLKNCKKLKSVSVLPPNLKCLDAHGCDSLEEVG 948

Query: 303  GALKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK------- 349
              L +          Y   NC    ++   N ++ +  +     Q +SD  ++       
Sbjct: 949  SPLAVLMVTGKIHCTYIFTNCNKLDQVAESNIISFTWRKS----QMMSDALNRYNGGFVL 1004

Query: 350  ---LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVP--KHSTGT 404
               +S  FPG ++P  F +Q  G+ +    P +  + +++ G A+C V   P  +H +  
Sbjct: 1005 ESLVSTCFPGCEVPASFDHQAYGALLQTKLPRHWCD-SRLTGIALCAVILFPDYQHQSNR 1063

Query: 405  YLFHSYPAHELECSMD-GSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRL 463
            +L        ++C+ + G+ +G  I F    G +   H     + +HG+        +R 
Sbjct: 1064 FL--------VKCTCEFGTEDGPCISFSSIVGDINKRH-----VEKHGNGCIPSKASLRF 1110

Query: 464  SFRSISDPTWK--VKRCGFHPIY 484
                 +       V +CGF  +Y
Sbjct: 1111 QVTDGASEVGNCHVLKCGFTLVY 1133



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 93/183 (50%), Gaps = 29/183 (15%)

Query: 648 SRLWEEADEFPDIVQV-------------LSDGTDIRELSL--AIEL---------LFGL 683
           +RLW+E+ E   +  V             L    +IR L+L   IEL         +  L
Sbjct: 671 TRLWKESKEISKLKWVDLSHSSELCDISGLIGAHNIRRLNLEGCIELKTLPQEMQEMESL 730

Query: 684 VQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
           + L L GC  L  LP     LK L TL LS    F +FP I+   + L   +L+GTAI+ 
Sbjct: 731 IYLNLGGCTRLVSLPEF--KLKSLKTLILSHCKNFEQFPVISECLEAL---YLQGTAIKC 785

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +P SIE L   IL +LKDC+ L SLP  +  LRSL+ +  SGCSKLK   E    ++S++
Sbjct: 786 IPTSIENLQKLILLDLKDCEVLVSLPDCLGNLRSLQELILSGCSKLKFFPELKETMKSIK 845

Query: 804 VRL 806
           + L
Sbjct: 846 ILL 848



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 25/164 (15%)

Query: 655 DEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           ++FP I + L      GT I+ +  +IE L  L+ L L  C+ L  LP  +  L+ L  L
Sbjct: 764 EQFPVISECLEALYLQGTAIKCIPTSIENLQKLILLDLKDCEVLVSLPDCLGNLRSLQEL 823

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL--SGNILSN------LKDC 762
            LSG SK + FPE+  +   +  + L+GTAI+ +P  ++ +   G+ ++N      L D 
Sbjct: 824 ILSGCSKLKFFPELKETMKSIKILLLDGTAIKQMPILLQCIQSQGHSVANKTLPNSLSDY 883

Query: 763 -------------KNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
                         +++SL + I+ L  L+ +    C KLK+V+
Sbjct: 884 YLPSSLLSLCLSGNDIESLHANISQLYHLKWLDLKNCKKLKSVS 927


>gi|386336196|ref|YP_006032366.1| POPC protein [Ralstonia solanacearum Po82]
 gi|334198646|gb|AEG71830.1| POPC protein [Ralstonia solanacearum Po82]
          Length = 894

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 142/297 (47%), Gaps = 42/297 (14%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L  +   + E+   IE L  LE L+LKG KNL +LP  +  L  L  L L     +K
Sbjct: 193 LKKLATEDCDLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLMETG-IK 251

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P +      L +L +D + + ++P+    LP L  L L++ K L  LPSS   L +LK
Sbjct: 252 TLPPM-GEASALQRLTIDNSPLEKLPTGFTALPQLANLSLSDTK-LHELPSSFGNLSALK 309

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           TL+L G  +LE++P + G++  L+ L ++G  IR    ++  M    SL     +E   +
Sbjct: 310 TLSLQGNPRLESLPQSFGQLSGLQALTLTGNHIR----ALPSMSGASSLQTLTVDE---A 362

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
           A   L   F+ LG                 +L  L LS+  L E  +P+DI NL +LK L
Sbjct: 363 ALEKLPADFSTLG-----------------NLAHLSLSNTKLRE--LPADIGNLQALKTL 403

Query: 247 YLNRNN--FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            L RNN     LPASI  L +LEEL L    R + LP +         NG S L TL
Sbjct: 404 TL-RNNEKLGALPASIKQLPHLEELTLS-GNRFRELPSL---------NGASGLKTL 449



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 142/326 (43%), Gaps = 81/326 (24%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++  L++L L  T + E+PSS   L+ L+ L+L+G   L SLP +   L  L+ L L+G 
Sbjct: 281 ALPQLANLSLSDTKLHELPSSFGNLSALKTLSLQGNPRLESLPQSFGQLSGLQALTLTG- 339

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           + ++  P +  +   L  L +D  ++ ++P+    L  L  L L+  K L  LP+ I  L
Sbjct: 340 NHIRALPSMSGA-SSLQTLTVDEAALEKLPADFSTLGNLAHLSLSNTK-LRELPADIGNL 397

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           ++LKTL L    KL  +P ++ ++  LEEL +SG   R                      
Sbjct: 398 QALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRE--------------------- 436

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                                     LPSL G   L  L + +  L  A++P+D D L  
Sbjct: 437 --------------------------LPSLNGASGLKTLTVENTSL--ASLPADFDALRK 468

Query: 243 -LKELYLNRNNFVTLPASISG-------------------------LLNLEELELEDCKR 276
            L +L L+    + LPAS+                           L N++ ++L DC R
Sbjct: 469 HLTQLTLSNTQLLELPASVGNLSSLTSLTLTKNARLEALPDDSIRRLKNVQMIDLSDCPR 528

Query: 277 LQSLPQ---IPPNLQFVRANGCSSLV 299
           L++LPQ     PNL+ +  +GC+SL 
Sbjct: 529 LRTLPQSIGALPNLRTLDLSGCTSLT 554



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 105/182 (57%), Gaps = 6/182 (3%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           +++ +L+ L L  T + E+P+ I  L  L+ LTL+  + L +LP +I  L  L  L LSG
Sbjct: 372 STLGNLAHLSLSNTKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG 431

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL-PGLELLYLNECKNLVRLPSSIN 120
            ++ ++ P +  +   L  L ++ TS+A +P+  + L   L  L L+  + L+ LP+S+ 
Sbjct: 432 -NRFRELPSLNGA-SGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQ-LLELPASVG 488

Query: 121 GLKSLKTLNLSGCCKLENVP-DTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
            L SL +L L+   +LE +P D++ ++++++ +D+S    +R    SI  + NLR+L  S
Sbjct: 489 NLSSLTSLTLTKNARLEALPDDSIRRLKNVQMIDLSDCPRLRTLPQSIGALPNLRTLDLS 548

Query: 179 GC 180
           GC
Sbjct: 549 GC 550



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 69/170 (40%), Gaps = 49/170 (28%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +REL   I  L  L  LTL   + L  LP +I  L +L  L LSG ++FRE P +  +
Sbjct: 385 TKLRELPADIGNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSG-NRFRELPSLNGA 443

Query: 728 -----------------------RDQLLEIHLEGTAIRGLPASI---------------- 748
                                  R  L ++ L  T +  LPAS+                
Sbjct: 444 SGLKTLTVENTSLASLPADFDALRKHLTQLTLSNTQLLELPASVGNLSSLTSLTLTKNAR 503

Query: 749 -ELLSGNILSNLK--------DCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            E L  + +  LK        DC  L++LP +I  L +LR +  SGC+ L
Sbjct: 504 LEALPDDSIRRLKNVQMIDLSDCPRLRTLPQSIGALPNLRTLDLSGCTSL 553



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL--SGLSKFREFPEITS 726
           D+ EL   IE LF L  L+L G KNL+ LP  +  L  LS L L  +G+       E ++
Sbjct: 202 DLHELQPEIENLFLLETLSLKGAKNLKALPDAVGRLPALSELTLMETGIKTLPPMGEASA 261

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
               L  + ++ + +  LP     L      +L D K L  LPS+   L +L+ +   G 
Sbjct: 262 ----LQRLTIDNSPLEKLPTGFTALPQLANLSLSDTK-LHELPSSFGNLSALKTLSLQGN 316

Query: 787 SKLKNVTETLGKVESLEV 804
            +L+++ ++ G++  L+ 
Sbjct: 317 PRLESLPQSFGQLSGLQA 334



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 12/205 (5%)

Query: 657 FPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
            P +  +    T + EL  +   L  L  L+L G   LE LP++   L  L  L L+G +
Sbjct: 282 LPQLANLSLSDTKLHELPSSFGNLSALKTLSLQGNPRLESLPQSFGQLSGLQALTLTG-N 340

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI----LSNLKDCKNLKSLPSTI 772
             R  P ++ +   L  + ++  A+  LPA    L GN+    LSN K    L+ LP+ I
Sbjct: 341 HIRALPSMSGA-SSLQTLTVDEAALEKLPADFSTL-GNLAHLSLSNTK----LRELPADI 394

Query: 773 NGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKL 832
             L++L+ +      KL  +  ++ ++  LE    S NR +     +        TV   
Sbjct: 395 GNLQALKTLTLRNNEKLGALPASIKQLPHLEELTLSGNRFRELPSLNGASGLKTLTVENT 454

Query: 833 AKAELLRDSDSWKKNVDKCMKLSTT 857
           + A L  D D+ +K++ + + LS T
Sbjct: 455 SLASLPADFDALRKHLTQ-LTLSNT 478


>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 577

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 139/279 (49%), Gaps = 7/279 (2%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           + +L  LYL  T +  +P S + L  LE L L G + L++LP +   L  L  L+LSG +
Sbjct: 179 LVNLERLYLSNTQLITLPESFDKLVNLEYLDLSGTQ-LTTLPESFDKLVNLEYLDLSG-T 236

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           +L   P+    + +L  LYL  T + ++P S   L  L+ LYL+  + L  LP S   L 
Sbjct: 237 QLTDLPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQ-LTDLPESFGELV 295

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           +L+ L LS   +L ++P++  K+ +L+ L++S T +     S   + NL+ LY S     
Sbjct: 296 NLQDLYLSNT-QLTDLPESFDKLVNLQRLNLSSTQLTALPESFGELVNLQRLYLSNTQLT 354

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
               S+   +    L  S+  +  +  S   + +L  L LSD  L   A+P   D L +L
Sbjct: 355 ALPESFDKLVNLQDLYLSNIQLTALPESFDKLVNLQHLYLSDTQL--TALPESFDKLVNL 412

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           + LYL+      LP S   L+NL+ L L    +L +LP+
Sbjct: 413 QHLYLSDTQLTALPESFGELVNLQHLNL-SSTQLTALPE 450



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 151/326 (46%), Gaps = 49/326 (15%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L  L L    +T +P S   L  LE L L G + L++ P + S L  L  L LS
Sbjct: 84  IGKLNNLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQ-LTTFPESFSELVNLERLYLS 142

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L  FP+    + +L  LYL  T +  +P S + L  LE LYL+  + L+ LP S +
Sbjct: 143 -STQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQ-LITLPESFD 200

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L+ L+LSG  +L  +P++  K+ +LE LD+SGT +     S   + NL+ LY S  
Sbjct: 201 KLVNLEYLDLSGT-QLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDT 259

Query: 181 N--EPPASASWHLHLP-------------------FNL--LGKSSCPVALMLPSLTGVCS 217
              + P S    ++L                     NL  L  S+  +  +  S   + +
Sbjct: 260 QLTDLPESFGELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQLTDLPESFDKLVN 319

Query: 218 LTKLDLSDCGL-------GE--------------AAIPSDIDNLHSLKELYLNRNNFVTL 256
           L +L+LS   L       GE               A+P   D L +L++LYL+      L
Sbjct: 320 LQRLNLSSTQLTALPESFGELVNLQRLYLSNTQLTALPESFDKLVNLQDLYLSNIQLTAL 379

Query: 257 PASISGLLNLEELELEDCKRLQSLPQ 282
           P S   L+NL+ L L D  +L +LP+
Sbjct: 380 PESFDKLVNLQHLYLSDT-QLTALPE 404



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 140/295 (47%), Gaps = 28/295 (9%)

Query: 11  YLD--GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           YLD  GT +T +P S + L  LE L L G + L+ LP +   L  L+ L LS  ++L   
Sbjct: 207 YLDLSGTQLTTLPESFDKLVNLEYLDLSGTQ-LTDLPESFGELVNLQDLYLSD-TQLTDL 264

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           P+    + +L +LYL  T + ++P S   L  L+ LYL+  + L  LP S + L +L+ L
Sbjct: 265 PESFGELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQ-LTDLPESFDKLVNLQRL 323

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
           NLS   +L  +P++ G++ +L+ L +S T +     S   + NL+ LY S         S
Sbjct: 324 NLS-STQLTALPESFGELVNLQRLYLSNTQLTALPESFDKLVNLQDLYLSNIQLTALPES 382

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL-------GE----------- 230
           +   +    L  S   +  +  S   + +L  L LSD  L       GE           
Sbjct: 383 FDKLVNLQHLYLSDTQLTALPESFDKLVNLQHLYLSDTQLTALPESFGELVNLQHLNLSS 442

Query: 231 ---AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
               A+P     L +L+ L L+     TLP S   L+NL+ L+L +  +L +LP+
Sbjct: 443 TQLTALPESFGELVNLQHLNLSSTQLTTLPESFGELVNLQNLDLSNT-QLTTLPK 496



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 29/275 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
              + +L DLYL  T +T++P S + L  L+ L L   + L++LP +   L  L+ L LS
Sbjct: 291 FGELVNLQDLYLSNTQLTDLPESFDKLVNLQRLNLSSTQ-LTALPESFGELVNLQRLYLS 349

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+    + +L  LYL    +  +P S + L  L+ LYL++ + L  LP S +
Sbjct: 350 N-TQLTALPESFDKLVNLQDLYLSNIQLTALPESFDKLVNLQHLYLSDTQ-LTALPESFD 407

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L+ L LS   +L  +P++ G++ +L+ L++S T +     S   + NL+       
Sbjct: 408 KLVNLQHLYLSDT-QLTALPESFGELVNLQHLNLSSTQLTALPESFGELVNLQ------- 459

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                    HL+L       SS  +  +  S   + +L  LDLS+  L    +P     L
Sbjct: 460 ---------HLNL-------SSTQLTTLPESFGELVNLQNLDLSNTQL--TTLPKSFGEL 501

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +L+ L L+   F TLP S   L+NL+ L+L + +
Sbjct: 502 VNLQNLDLSNTQFTTLPESFDELVNLKTLDLSNNQ 536



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 7/269 (2%)

Query: 14  GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
           G  ++ VP  I  L  L  L L   + L++LP +   L  L  L+LSG  +L  FP+  +
Sbjct: 74  GQGLSVVPDGIGKLNNLGGLDLSHNQ-LTTLPESFGKLVNLEYLDLSGA-QLTTFPESFS 131

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            + +L +LYL  T +   P S   L  L+ LYL+  + L+ LP S + L +L+ L LS  
Sbjct: 132 ELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQ-LITLPKSFDKLVNLERLYLSN- 189

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            +L  +P++  K+ +LE LD+SGT +     S   + NL  L  SG        S+   +
Sbjct: 190 TQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELV 249

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
               L  S   +  +  S   + +L +L LS+  L +  +P     L +L++LYL+    
Sbjct: 250 NLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTD--LPESFGELVNLQDLYLSNTQL 307

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQ 282
             LP S   L+NL+ L L    +L +LP+
Sbjct: 308 TDLPESFDKLVNLQRLNL-SSTQLTALPE 335


>gi|224151169|ref|XP_002337069.1| predicted protein [Populus trichocarpa]
 gi|222837951|gb|EEE76316.1| predicted protein [Populus trichocarpa]
          Length = 468

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/295 (35%), Positives = 151/295 (51%), Gaps = 36/295 (12%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +K L  L L+  S +  +P+SI  L  L  L L  C  L+SLP +I  LKCL TL+L
Sbjct: 162 IGELKCLVKLDLNSCSKLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGELKCLGTLDL 221

Query: 60  SGCSKLKKFPQIV--ASMED-LSKL--YLDGTS-----IAEVPSSIELLPGLELLYLNEC 109
           + CSKL   P  +  AS+ + + KL   +D +S     +A +P SI  L  L +L+LN C
Sbjct: 222 NSCSKLASLPDSIELASLPNSIGKLKCLVDASSWLLLKLARLPKSIGKLKCLVMLHLNHC 281

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFL 168
             L  LP SI  LKSL  L+LS C KL  +PD++G+++ L  L++   + + R   SI  
Sbjct: 282 SELACLPDSIGKLKSLVELHLSYCSKLAWLPDSIGELKCLVTLNLHHCSELARLPDSIGE 341

Query: 169 MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           +K L  L  + C++  +       LP N +GK                SL +L+LS C  
Sbjct: 342 LKCLVMLDLNSCSKLAS-------LP-NSIGKLK--------------SLAELNLSSCS- 378

Query: 229 GEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             A++P+ I  L  L  L LN  +   +LP SI  L +L EL L  C +L  LP 
Sbjct: 379 KLASLPNSIGELKCLGTLNLNCCSELASLPDSIGELKSLVELHLSSCSKLACLPN 433



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 151/312 (48%), Gaps = 23/312 (7%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC--SKLKKFPQIVAS 74
           +  +P SI  L  L  L    C  L+SLP +I  LKCL  L+L     +KL   P  +  
Sbjct: 57  LASLPDSIGKLKSLAELDFYYCLKLASLPDSIGELKCLPRLDLELLLKTKLASLPDSIGK 116

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           ++ L +L+L   S +A +P SI  L  L +L L+ C  L RLP SI  LK L  L+L+ C
Sbjct: 117 LKSLVELHLGYCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGELKCLVKLDLNSC 176

Query: 134 CKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPA-SASWHL 191
            KL ++P+++GK++SL EL +S  + +    +SI  +K L +L  + C++  +   S  L
Sbjct: 177 SKLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGELKCLGTLDLNSCSKLASLPDSIEL 236

Query: 192 HLPFNLLGKSSCPV----------ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
               N +GK  C V          A +  S+  +  L  L L+ C    A +P  I  L 
Sbjct: 237 ASLPNSIGKLKCLVDASSWLLLKLARLPKSIGKLKCLVMLHLNHCS-ELACLPDSIGKLK 295

Query: 242 SLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---FVRANGCSS 297
           SL EL+L+  +    LP SI  L  L  L L  C  L  LP     L+    +  N CS 
Sbjct: 296 SLVELHLSYCSKLAWLPDSIGELKCLVTLNLHHCSELARLPDSIGELKCLVMLDLNSCSK 355

Query: 298 LVTL---FGALK 306
           L +L    G LK
Sbjct: 356 LASLPNSIGKLK 367



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 2/153 (1%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +K L +L+L   S +  +P SI  L  L  L L  C  L+ LP +I  LKCL  L+L
Sbjct: 291 IGKLKSLVELHLSYCSKLAWLPDSIGELKCLVTLNLHHCSELARLPDSIGELKCLVMLDL 350

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           + CSKL   P  +  ++ L++L L   S +A +P+SI  L  L  L LN C  L  LP S
Sbjct: 351 NSCSKLASLPNSIGKLKSLAELNLSSCSKLASLPNSIGELKCLGTLNLNCCSELASLPDS 410

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
           I  LKSL  L+LS C KL  +P+ +GK++SL E
Sbjct: 411 IGELKSLVELHLSSCSKLACLPNRIGKLKSLAE 443



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 141/315 (44%), Gaps = 55/315 (17%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           + +  +P SI  L  L +L L  C  L+SLP +I  LK L+ L+L  C +L   P  +  
Sbjct: 7   SKLASLPDSIGKLKCLAMLDLNYCSKLTSLPDSIGELKYLKELKLHHCLELASLPDSIGK 66

Query: 75  MEDLSKL---------------------------YLDGTSIAEVPSSIELLPGLELLYLN 107
           ++ L++L                            L  T +A +P SI  L  L  L+L 
Sbjct: 67  LKSLAELDFYYCLKLASLPDSIGELKCLPRLDLELLLKTKLASLPDSIGKLKSLVELHLG 126

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSI 166
            C  L  LP SI  LK L  LNL  C +L  +PD++G+++ L +LD+ S + +    +SI
Sbjct: 127 YCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGELKCLVKLDLNSCSKLASLPNSI 186

Query: 167 FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT------- 219
             +K+L  LY S C++  +       LP N +G+  C   L L S + + SL        
Sbjct: 187 GKLKSLAELYLSSCSKLAS-------LP-NSIGELKCLGTLDLNSCSKLASLPDSIELAS 238

Query: 220 ------KLD-LSDCG----LGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLE 267
                 KL  L D      L  A +P  I  L  L  L+LN  +    LP SI  L +L 
Sbjct: 239 LPNSIGKLKCLVDASSWLLLKLARLPKSIGKLKCLVMLHLNHCSELACLPDSIGKLKSLV 298

Query: 268 ELELEDCKRLQSLPQ 282
           EL L  C +L  LP 
Sbjct: 299 ELHLSYCSKLAWLPD 313



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 124/255 (48%), Gaps = 28/255 (10%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEV 91
           L L  C  L+SLP +I  LKCL  L+L+ CSKL   P  +  ++ L +L L     +A +
Sbjct: 1   LNLGHCSKLASLPDSIGKLKCLAMLDLNYCSKLTSLPDSIGELKYLKELKLHHCLELASL 60

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC--CKLENVPDTLGKVESL 149
           P SI  L  L  L    C  L  LP SI  LK L  L+L      KL ++PD++GK++SL
Sbjct: 61  PDSIGKLKSLAELDFYYCLKLASLPDSIGELKCLPRLDLELLLKTKLASLPDSIGKLKSL 120

Query: 150 EELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            EL +   + +     SI  +K L  L    C+E          LP + +G+  C     
Sbjct: 121 VELHLGYCSKLASLPESIGKLKCLVMLNLHHCSELT-------RLPDS-IGELKC----- 167

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLE 267
                    L KLDL+ C    A++P+ I  L SL ELYL+  +   +LP SI  L  L 
Sbjct: 168 ---------LVKLDLNSCS-KLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGELKCLG 217

Query: 268 ELELEDCKRLQSLPQ 282
            L+L  C +L SLP 
Sbjct: 218 TLDLNSCSKLASLPD 232



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 1/126 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-I 741
           LV L L+ C  L RLP +I  LK L  L+L+  SK    P        L E++L   + +
Sbjct: 321 LVTLNLHHCSELARLPDSIGELKCLVMLDLNSCSKLASLPNSIGKLKSLAELNLSSCSKL 380

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP SI  L      NL  C  L SLP +I  L+SL  ++ S CSKL  +   +GK++S
Sbjct: 381 ASLPNSIGELKCLGTLNLNCCSELASLPDSIGELKSLVELHLSSCSKLACLPNRIGKLKS 440

Query: 802 LEVRLS 807
           L   LS
Sbjct: 441 LAEALS 446



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELL 751
            L RLP++I  LK L  L+L+  S+    P+       L+E+HL   + +  LP SI  L
Sbjct: 259 KLARLPKSIGKLKCLVMLHLNHCSELACLPDSIGKLKSLVELHLSYCSKLAWLPDSIGEL 318

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWN 810
              +  NL  C  L  LP +I  L+ L M+  + CSKL ++  ++GK++SL E+ LSS +
Sbjct: 319 KCLVTLNLHHCSELARLPDSIGELKCLVMLDLNSCSKLASLPNSIGKLKSLAELNLSSCS 378

Query: 811 R----PKMQNDFDCVEQSAVETVTKLA 833
           +    P    +  C+    +   ++LA
Sbjct: 379 KLASLPNSIGELKCLGTLNLNCCSELA 405



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 19/209 (9%)

Query: 645 GNCSRLW---EEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           G CS+L    E   +   +V + L   +++  L  +I  L  LV+L LN C  L  LP +
Sbjct: 126 GYCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGELKCLVKLDLNSCSKLASLPNS 185

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLS-GNILSN 758
           I  LK L+ L LS  SK    P        L  + L   + +  LP SIEL S  N +  
Sbjct: 186 IGKLKSLAELYLSSCSKLASLPNSIGELKCLGTLDLNSCSKLASLPDSIELASLPNSIGK 245

Query: 759 LK---DCKN-----LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSW 809
           LK   D  +     L  LP +I  L+ L M++ + CS+L  + +++GK++SL E+ LS  
Sbjct: 246 LKCLVDASSWLLLKLARLPKSIGKLKCLVMLHLNHCSELACLPDSIGKLKSLVELHLSYC 305

Query: 810 NR----PKMQNDFDCVEQSAVETVTKLAK 834
           ++    P    +  C+    +   ++LA+
Sbjct: 306 SKLAWLPDSIGELKCLVTLNLHHCSELAR 334



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 6/154 (3%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELL 751
            L  LP +I  LK L  L+L   SK    PE       L+ ++L   + +  LP SI  L
Sbjct: 106 KLASLPDSIGKLKSLVELHLGYCSKLASLPESIGKLKCLVMLNLHHCSELTRLPDSIGEL 165

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWN 810
              +  +L  C  L SLP++I  L+SL  +Y S CSKL ++  ++G+++ L  + L+S +
Sbjct: 166 KCLVKLDLNSCSKLASLPNSIGKLKSLAELYLSSCSKLASLPNSIGELKCLGTLDLNSCS 225

Query: 811 RPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSW 844
             K+ +  D +E +++     + K + L D+ SW
Sbjct: 226 --KLASLPDSIELASLP--NSIGKLKCLVDASSW 255



 Score = 42.7 bits (99), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 27/147 (18%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL------ 736
           L  L LN C  L  LP +I  LKYL  L L    +    P+       L E+        
Sbjct: 22  LAMLDLNYCSKLTSLPDSIGELKYLKELKLHHCLELASLPDSIGKLKSLAELDFYYCLKL 81

Query: 737 ---------------------EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
                                  T +  LP SI  L   +  +L  C  L SLP +I  L
Sbjct: 82  ASLPDSIGELKCLPRLDLELLLKTKLASLPDSIGKLKSLVELHLGYCSKLASLPESIGKL 141

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESL 802
           + L M+    CS+L  + +++G+++ L
Sbjct: 142 KCLVMLNLHHCSELTRLPDSIGELKCL 168



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 648 SRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           +RL +   E   +V + L+  + +  L  +I  L  L +L L+ C  L  LP +I  LK 
Sbjct: 333 ARLPDSIGELKCLVMLDLNSCSKLASLPNSIGKLKSLAELNLSSCSKLASLPNSIGELKC 392

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
           L TLNL+  S+    P+       L+E+HL   +
Sbjct: 393 LGTLNLNCCSELASLPDSIGELKSLVELHLSSCS 426


>gi|222619838|gb|EEE55970.1| hypothetical protein OsJ_04699 [Oryza sativa Japonica Group]
          Length = 763

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 134/279 (48%), Gaps = 15/279 (5%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           +D   +T +P S++ LT L  L L GCK L  LP  +  L  L    ++ C KL   P+ 
Sbjct: 440 IDCPKLTFLPESMKNLTALIELRLDGCKGLEILPEGLGLLISLEKFIINNCPKLTFLPES 499

Query: 72  VASMEDLSKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
           + ++  L +L+LDG    E+ P  + LL  LE   + +C  L  LP S+  L +L  L L
Sbjct: 500 MKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTFLPESMKNLTALIRLLL 559

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRS---LYFSGCNEPPA 185
            GC  LE +P+ LG + SLEE  +         P+S    MKNL +   L   GC     
Sbjct: 560 DGCKGLEILPEWLGMLVSLEEFIIIDCPKLTFLPSS----MKNLTAITELRLDGCKGLEI 615

Query: 186 -SASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                 LH+P      + CP+   LP L G + +L  LD+         +P  + NL +L
Sbjct: 616 LPEGLGLHIPLKRFVINDCPMLTFLPELLGHLTALKCLDIQSSP-NLTYLPESMKNLTAL 674

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +EL+L    F +LP  I   + L+E+ + D   L SLP+
Sbjct: 675 EELWL--EGFNSLPEWIGQFIYLKEISIFDSPNLTSLPE 711



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 150/319 (47%), Gaps = 39/319 (12%)

Query: 11  YLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQ 70
           +++   +T +P+S++ LT L  L L+GCK L +LP  +  L  L    +  C KL   P+
Sbjct: 247 FINCPVLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPE 306

Query: 71  IVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            + ++  L +L+LDG   +  +P  + LL  L+   ++ C  L  LP S+  L +L  L 
Sbjct: 307 SMKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELR 366

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRR--PTSSIFLMKNL---RSLYFSGCNEPP 184
           L GC +LE +P  LG + SL+++ ++   +    P S    MKNL   + LY  GC E  
Sbjct: 367 LDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPES----MKNLTAMKVLYLYGCKE-- 420

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                               + ++   L  + SL K  L DC      +P  + NL +L 
Sbjct: 421 --------------------LEILPEGLGMLISLEKFVLIDCP-KLTFLPESMKNLTALI 459

Query: 245 ELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF---VRANGCSSLVT 300
           EL L+       LP  +  L++LE+  + +C +L  LP+   NL     +  +GC  L  
Sbjct: 460 ELRLDGCKGLEILPEGLGLLISLEKFIINNCPKLTFLPESMKNLTALIELWLDGCKGLEI 519

Query: 301 LFGALKL--CRSKYTIINC 317
           L   L L  C  K+ I++C
Sbjct: 520 LPEGLGLLICLEKFIIMDC 538



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 158/341 (46%), Gaps = 43/341 (12%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           + +D   +T +P S++ LT L  L L GCK L +LP  +  L  L+   +S C KL   P
Sbjct: 294 IIMDCPKLTFLPESMKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLP 353

Query: 70  QIVASMEDLSKLYLDGTSIAE-VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           + +  +  L +L LDG    E +P  + LL  L+ + +N    L  LP S+  L ++K L
Sbjct: 354 ESMKKLATLIELRLDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLTAMKVL 413

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL---MKNLRSLY---FSGCNE 182
            L GC +LE +P+ LG + SLE+       I  P  + FL   MKNL +L      GC  
Sbjct: 414 YLYGCKELEILPEGLGMLISLEKF----VLIDCPKLT-FLPESMKNLTALIELRLDGCK- 467

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                           G    P  L L     + SL K  +++C      +P  + NL +
Sbjct: 468 ----------------GLEILPEGLGL-----LISLEKFIINNCP-KLTFLPESMKNLTA 505

Query: 243 LKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL-QFVR--ANGCSSL 298
           L EL+L+       LP  +  L+ LE+  + DC +L  LP+   NL   +R   +GC  L
Sbjct: 506 LIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTFLPESMKNLTALIRLLLDGCKGL 565

Query: 299 VTLFGALKLCRS--KYTIINC--IDSLKLLRKNGLAISMLR 335
             L   L +  S  ++ II+C  +  L    KN  AI+ LR
Sbjct: 566 EILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAITELR 606



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 141/316 (44%), Gaps = 39/316 (12%)

Query: 1   MASMKDLSDLYLDGTSITE-VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M ++  L +L+LDG    E +P  + LL  L+   +  C  L+ LP ++  L  L  L L
Sbjct: 308 MKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELRL 367

Query: 60  SGCSKLKKFPQIVA---------------------SMEDLSK---LYLDGTSIAEV-PSS 94
            GC +L+  P+ +                      SM++L+    LYL G    E+ P  
Sbjct: 368 DGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLTAMKVLYLYGCKELEILPEG 427

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           + +L  LE   L +C  L  LP S+  L +L  L L GC  LE +P+ LG + SLE+  +
Sbjct: 428 LGMLISLEKFVLIDCPKLTFLPESMKNLTALIELRLDGCKGLEILPEGLGLLISLEKFII 487

Query: 155 SGTA--IRRPTSSIFLMKNLRSL---YFSGCNEPPA-SASWHLHLPFNLLGKSSCPVALM 208
           +        P S    MKNL +L   +  GC           L +         CP    
Sbjct: 488 NNCPKLTFLPES----MKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTF 543

Query: 209 LP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE-LYLNRNNFVTLPASISGLLNL 266
           LP S+  + +L +L L  C  G   +P  +  L SL+E + ++      LP+S+  L  +
Sbjct: 544 LPESMKNLTALIRLLLDGCK-GLEILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAI 602

Query: 267 EELELEDCKRLQSLPQ 282
            EL L+ CK L+ LP+
Sbjct: 603 TELRLDGCKGLEILPE 618



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 137/322 (42%), Gaps = 41/322 (12%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEV- 91
           + +  CK    + V    L  +   ++ GCS L+ FP I+ S   L +LYL      E+ 
Sbjct: 173 VVINNCKYPPDMWVRFQHLATIEIFQVEGCSGLRTFPDILQSFVSLRELYLCSWENLEIL 232

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
           P  +  L  LE++    C  L  LP+S+  L SL+ L L GC  LE +P+ +G++ SLE+
Sbjct: 233 PEWLGQLICLEVIEFINCPVLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEK 292

Query: 152 LDVSGTA--IRRPTSSIFLMKNLRS---LYFSGCNE-PPASASWHLHLPFNLLGKSSCPV 205
             +         P S    MKNL +   L+  GC           L +       S+CP 
Sbjct: 293 FIIMDCPKLTFLPES----MKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPK 348

Query: 206 ALMLP-SLTGVCSLTKLDLSDCGLGEAA-----------------------IPSDIDNLH 241
              LP S+  + +L +L L  C   E                         +P  + NL 
Sbjct: 349 LTYLPESMKKLATLIELRLDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLT 408

Query: 242 SLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF---VRANGCSS 297
           ++K LYL        LP  +  L++LE+  L DC +L  LP+   NL     +R +GC  
Sbjct: 409 AMKVLYLYGCKELEILPEGLGMLISLEKFVLIDCPKLTFLPESMKNLTALIELRLDGCKG 468

Query: 298 LVTLFGALKLCRS--KYTIINC 317
           L  L   L L  S  K+ I NC
Sbjct: 469 LEILPEGLGLLISLEKFIINNC 490



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 11/200 (5%)

Query: 1   MASMKDLSDLYLDGTSITEV-PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M ++  L +L+LDG    E+ P  + LL  LE   +  C  L+ LP ++ +L  L  L L
Sbjct: 500 MKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTFLPESMKNLTALIRLLL 559

Query: 60  SGCSKLKKFPQIVASMEDLSK-LYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GC  L+  P+ +  +  L + + +D   +  +PSS++ L  +  L L+ CK L  LP  
Sbjct: 560 DGCKGLEILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAITELRLDGCKGLEILPEG 619

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV--SGTAIRRPTSSIFLMKNLRS-- 174
           +     LK   ++ C  L  +P+ LG + +L+ LD+  S      P S    MKNL +  
Sbjct: 620 LGLHIPLKRFVINDCPMLTFLPELLGHLTALKCLDIQSSPNLTYLPES----MKNLTALE 675

Query: 175 -LYFSGCNEPPASASWHLHL 193
            L+  G N  P      ++L
Sbjct: 676 ELWLEGFNSLPEWIGQFIYL 695



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 1/142 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           ++ D   +  L  +++ L  L++L L+GCK LE LP  +  L  L    +S   K    P
Sbjct: 294 IIMDCPKLTFLPESMKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLP 353

Query: 723 EITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           E       L+E+ L+G   +  LP  + LL       + +   L  LP ++  L +++++
Sbjct: 354 ESMKKLATLIELRLDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLTAMKVL 413

Query: 782 YPSGCSKLKNVTETLGKVESLE 803
           Y  GC +L+ + E LG + SLE
Sbjct: 414 YLYGCKELEILPEGLGMLISLE 435



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 1/142 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL D   +  L  +++ L  L++L L+GCK LE LP  +  L  L    ++   K    P
Sbjct: 438 VLIDCPKLTFLPESMKNLTALIELRLDGCKGLEILPEGLGLLISLEKFIINNCPKLTFLP 497

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           E   +   L+E+ L+G   +  LP  + LL       + DC  L  LP ++  L +L  +
Sbjct: 498 ESMKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTFLPESMKNLTALIRL 557

Query: 782 YPSGCSKLKNVTETLGKVESLE 803
              GC  L+ + E LG + SLE
Sbjct: 558 LLDGCKGLEILPEWLGMLVSLE 579



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 1/132 (0%)

Query: 673 LSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLL 732
           L  +++ L  L +L L GCK LE LP  +  L  L    +    K    PE   +   L+
Sbjct: 256 LPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPESMKNLTALI 315

Query: 733 EIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           E+HL+G   +  LP  + LL       + +C  L  LP ++  L +L  +   GC +L+ 
Sbjct: 316 ELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELRLDGCKRLET 375

Query: 792 VTETLGKVESLE 803
           + + LG + SL+
Sbjct: 376 LPKWLGLLISLK 387



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 1/119 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           L L GCK LE LP  +  L  L    L    K    PE   +   L+E+ L+G   +  L
Sbjct: 413 LYLYGCKELEILPEGLGMLISLEKFVLIDCPKLTFLPESMKNLTALIELRLDGCKGLEIL 472

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           P  + LL       + +C  L  LP ++  L +L  ++  GC  L+ + E LG +  LE
Sbjct: 473 PEGLGLLISLEKFIINNCPKLTFLPESMKNLTALIELWLDGCKGLEILPEGLGLLICLE 531



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 1/120 (0%)

Query: 685 QLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRG 743
           ++ +N CK    +      L  +    + G S  R FP+I  S   L E++L     +  
Sbjct: 172 RVVINNCKYPPDMWVRFQHLATIEIFQVEGCSGLRTFPDILQSFVSLRELYLCSWENLEI 231

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LP  +  L    +    +C  L +LP+++  L SLR +   GC  L+ + E +G++ SLE
Sbjct: 232 LPEWLGQLICLEVIEFINCPVLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLE 291



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 72/181 (39%), Gaps = 42/181 (23%)

Query: 657 FPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           FPDI+Q       +REL L                +NLE LP  +  L  L  +      
Sbjct: 208 FPDILQSF---VSLRELYLC-------------SWENLEILPEWLGQLICLEVIEFINCP 251

Query: 717 KFREFP----EITSSRDQLLE---------------IHLEGTAIRG------LPASIELL 751
                P     +TS R+ LL                I LE   I        LP S++ L
Sbjct: 252 VLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPESMKNL 311

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSWN 810
           +  I  +L  CK L++LP  +  L SL+    S C KL  + E++ K+ +L E+RL    
Sbjct: 312 TALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELRLDGCK 371

Query: 811 R 811
           R
Sbjct: 372 R 372


>gi|302818895|ref|XP_002991120.1| hypothetical protein SELMODRAFT_132799 [Selaginella moellendorffii]
 gi|300141214|gb|EFJ07928.1| hypothetical protein SELMODRAFT_132799 [Selaginella moellendorffii]
          Length = 550

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 146/319 (45%), Gaps = 33/319 (10%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TSITE+P S+  L  LE + L  C  L +LP +I  L  L+ ++L+GC  L   P  +  
Sbjct: 58  TSITELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGE 117

Query: 75  MEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN---- 129
           + +L +L L G  S+ E+P  I  L  L  L ++ C+ L+ LP  I  L  L+ LN    
Sbjct: 118 LRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWC 177

Query: 130 --------------------LSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFL 168
                               LS C  L  +P T+GK+  L+ L + G A ++     I  
Sbjct: 178 EKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGG 237

Query: 169 MKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDC 226
           +K+LR L  + C      A     L    +L    C     LP+ + G+ SL +L+  +C
Sbjct: 238 LKSLRCLSLAECVSLTTLAVPRGSLASLEILDLVGCSSLTELPAGVAGMSSLERLNCREC 297

Query: 227 GLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ--- 282
                A+P  +  L  L+ LYL + +    LP  I  L  LE L+L+ C  L SLP    
Sbjct: 298 T-ALKALPPQVGELTRLQALYLQQCSTLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIG 356

Query: 283 IPPNLQFVRANGCSSLVTL 301
           +   L+F+  N C+ +  L
Sbjct: 357 MLSRLKFLHLNACTGIKQL 375



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 149/324 (45%), Gaps = 37/324 (11%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +++L +L L G  S+ E+P  I  LT L  L +  C+ L  LP  I +L  LR L +
Sbjct: 115 IGELRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNM 174

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C KL   P  V  + +L+ L L D  ++ E+P +I  L  L+ L+L  C +L  LP  
Sbjct: 175 MWCEKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPE 234

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG---------------------- 156
           I GLKSL+ L+L+ C  L  +    G + SLE LD+ G                      
Sbjct: 235 IGGLKSLRCLSLAECVSLTTLAVPRGSLASLEILDLVGCSSLTELPAGVAGMSSLERLNC 294

Query: 157 ---TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALML 209
              TA++     +  +  L++LY   C+     PP      +      L    C     L
Sbjct: 295 RECTALKALPPQVGELTRLQALYLQQCSTLKELPPQIGKLSM---LERLDLKKCGGLTSL 351

Query: 210 PSLTGVCSLTK-LDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLE 267
           PS  G+ S  K L L+ C  G   +P+++ ++ SL EL L    +   LPA +  L +LE
Sbjct: 352 PSEIGMLSRLKFLHLNACT-GIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLE 410

Query: 268 ELELEDCKRLQSLPQIPPNLQFVR 291
            L L+ C  L SLP    NL+ ++
Sbjct: 411 NLGLDGCTGLASLPADVGNLESLK 434



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 152/339 (44%), Gaps = 44/339 (12%)

Query: 4   MKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + +L+DL L D  ++ E+P +I  L+ L+ L L+GC +L  LP  I  LK LR L L+ C
Sbjct: 190 LHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGGLKSLRCLSLAEC 249

Query: 63  SKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
             L        S+  L  L L G +S+ E+P+ +  +  LE L   EC  L  LP  +  
Sbjct: 250 VSLTTLAVPRGSLASLEILDLVGCSSLTELPAGVAGMSSLERLNCRECTALKALPPQVGE 309

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSG 179
           L  L+ L L  C  L+ +P  +GK+  LE LD+   G     P S I ++  L+ L+ + 
Sbjct: 310 LTRLQALYLQQCSTLKELPPQIGKLSMLERLDLKKCGGLTSLP-SEIGMLSRLKFLHLNA 368

Query: 180 CN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPS 235
           C    + PA       L    LG   C     LP+  G + SL  L L  C  G A++P+
Sbjct: 369 CTGIKQLPAEVGDMRSLVE--LGLEGCTSLKGLPAQVGQLRSLENLGLDGCT-GLASLPA 425

Query: 236 DIDNLHSLKELYLNR-------------------------NNFVTLPASISGLLNLEELE 270
           D+ NL SLK L L +                          +   +PA +  +  L  L 
Sbjct: 426 DVGNLESLKRLSLAKCAALEGLPREVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLG 485

Query: 271 LEDCKRLQSLPQIP-----PNLQFVRANGCSSLVTLFGA 304
           LE C  L S+P  P     PNL+ +    C+ L    G+
Sbjct: 486 LEGCTSLSSIP--PGIFRLPNLELLDLRRCTLLAQDVGS 522



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 137/280 (48%), Gaps = 15/280 (5%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLD-GTSIAEV 91
           L L  C  L  LP +I SLK L +L +  C  L+  P  +  +  L +L L   TSI E+
Sbjct: 4   LELDNCVKLVELPRSIGSLKWLHSLHMHNCHSLRALPDSIGGLVMLQELVLSVCTSITEL 63

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
           P S+  L  LE + L  C  L+ LP SI  L +LK ++L+GC  L ++P  +G++ +L E
Sbjct: 64  PQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGELRNLRE 123

Query: 152 LDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVA 206
           L ++G  +++     I  + +L +L  S C +    P    +       N++      +A
Sbjct: 124 LVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWCEK--LA 181

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLN 265
            + P +  +  LT L+LSDC      +P  I  L  LK L+L    +   LP  I GL +
Sbjct: 182 ALPPQVGFLHELTDLELSDCK-NLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGGLKS 240

Query: 266 LEELELEDCKRLQSLPQIP----PNLQFVRANGCSSLVTL 301
           L  L L +C  L +L  +P     +L+ +   GCSSL  L
Sbjct: 241 LRCLSLAECVSLTTL-AVPRGSLASLEILDLVGCSSLTEL 279



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 27/280 (9%)

Query: 2   ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            S+  L  L L G +S+TE+P+ +  ++ LE L  + C  L +LP  +  L  L+ L L 
Sbjct: 260 GSLASLEILDLVGCSSLTELPAGVAGMSSLERLNCRECTALKALPPQVGELTRLQALYLQ 319

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            CS LK+ P  +  +  L +L L     +  +PS I +L  L+ L+LN C  + +LP+ +
Sbjct: 320 QCSTLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQLPAEV 379

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
             ++SL  L L GC  L+ +P  +G++ SLE L + G T +    + +  +++L+ L  +
Sbjct: 380 GDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLASLPADVGNLESLKRLSLA 439

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
            C                            LP   G     KL   D     + +P+++ 
Sbjct: 440 KCAALEG-----------------------LPREVGRLPKLKLLRLDGCTSMSEVPAELG 476

Query: 239 NLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRL 277
           ++ +L  L L    +  ++P  I  L NLE L+L  C  L
Sbjct: 477 HVQTLVNLGLEGCTSLSSIPPGIFRLPNLELLDLRRCTLL 516



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD  ++ EL + I  L  L +L L GC +L+ LP  I  LK L  L+L+          
Sbjct: 198 LSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGGLKSLRCLSLAECVSLTTLAV 257

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S   L  + L G +++  LPA +  +S     N ++C  LK+LP  +  L  L+ +Y
Sbjct: 258 PRGSLASLEILDLVGCSSLTELPAGVAGMSSLERLNCRECTALKALPPQVGELTRLQALY 317

Query: 783 PSGCSKLKNVTETLGKVESLE 803
              CS LK +   +GK+  LE
Sbjct: 318 LQQCSTLKELPPQIGKLSMLE 338



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-G 738
           L  L +L L GC +L+ LP  I +L +L+ L++S   +    P+   +   L E+++   
Sbjct: 118 LRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWC 177

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L       L DCKNL  LP TI  L  L+ ++  GC+ LK +   +G 
Sbjct: 178 EKLAALPPQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGG 237

Query: 799 VESL 802
           ++SL
Sbjct: 238 LKSL 241



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L   + ++EL   I  L  L +L L  C  L  LP  I  L  L  L+L+  +  ++ P 
Sbjct: 318 LQQCSTLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGMLSRLKFLHLNACTGIKQLPA 377

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                  L+E+ LEG T+++GLPA +  L       L  C  L SLP+ +  L SL+ + 
Sbjct: 378 EVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLASLPADVGNLESLKRLS 437

Query: 783 PSGCSKLKNVTETLG 797
            + C+ L+ +   +G
Sbjct: 438 LAKCAALEGLPREVG 452



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAI 741
           LV+L L+ C  L  LPR+I +LK+L +L++      R  P+       L E+ L   T+I
Sbjct: 1   LVELELDNCVKLVELPRSIGSLKWLHSLHMHNCHSLRALPDSIGGLVMLQELVLSVCTSI 60

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP S+  L      +L  C  L +LP +I  L +L++M  +GC  L ++   +G++ +
Sbjct: 61  TELPQSLGNLHDLEYVDLAACFKLMALPRSIGRLMALKVMDLTGCESLTSLPPEIGELRN 120

Query: 802 L 802
           L
Sbjct: 121 L 121



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 26/140 (18%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  M+ L +L L+G TS+  +P+ +  L  LE L L GC  L+SLP  + +L+ L+ L L
Sbjct: 379 VGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGCTGLASLPADVGNLESLKRLSL 438

Query: 60  S------------------------GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSS 94
           +                        GC+ + + P  +  ++ L  L L+G TS++ +P  
Sbjct: 439 AKCAALEGLPREVGRLPKLKLLRLDGCTSMSEVPAELGHVQTLVNLGLEGCTSLSSIPPG 498

Query: 95  IELLPGLELLYLNECKNLVR 114
           I  LP LELL L  C  L +
Sbjct: 499 IFRLPNLELLDLRRCTLLAQ 518



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 2/141 (1%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L   +  L  L  L L  C  L+ LP  I  L  L  L+L         P     
Sbjct: 298 TALKALPPQVGELTRLQALYLQQCSTLKELPPQIGKLSMLERLDLKKCGGLTSLPSEIGM 357

Query: 728 RDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
             +L  +HL   T I+ LPA +  +   +   L+ C +LK LP+ +  LRSL  +   GC
Sbjct: 358 LSRLKFLHLNACTGIKQLPAEVGDMRSLVELGLEGCTSLKGLPAQVGQLRSLENLGLDGC 417

Query: 787 SKLKNVTETLGKVESLEVRLS 807
           + L ++   +G +ESL+ RLS
Sbjct: 418 TGLASLPADVGNLESLK-RLS 437



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 1/143 (0%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL+    ++EL   I  L  L  L ++ C+ L  LP+ I  L  L  LN+    K    P
Sbjct: 125 VLAGCGSLKELPPEIGSLTHLTNLDVSHCEQLMLLPQQIGNLTGLRELNMMWCEKLAALP 184

Query: 723 EITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
                  +L ++ L     +  LP +I  LS     +L+ C +LK LP  I GL+SLR +
Sbjct: 185 PQVGFLHELTDLELSDCKNLPELPVTIGKLSCLKRLHLRGCAHLKVLPPEIGGLKSLRCL 244

Query: 782 YPSGCSKLKNVTETLGKVESLEV 804
             + C  L  +    G + SLE+
Sbjct: 245 SLAECVSLTTLAVPRGSLASLEI 267



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 70/165 (42%), Gaps = 11/165 (6%)

Query: 646 NCSRLWEEADEFPDIVQ----VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NC  L    D    +V     VLS  T I EL  ++  L  L  + L  C  L  LPR+I
Sbjct: 32  NCHSLRALPDSIGGLVMLQELVLSVCTSITELPQSLGNLHDLEYVDLAACFKLMALPRSI 91

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLK 760
             L  L  ++L+G       P        L E+ L G  +++ LP  I  L+     ++ 
Sbjct: 92  GRLMALKVMDLTGCESLTSLPPEIGELRNLRELVLAGCGSLKELPPEIGSLTHLTNLDVS 151

Query: 761 DCKNLKSLPSTIN---GLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            C+ L  LP  I    GLR L MM+   C KL  +   +G +  L
Sbjct: 152 HCEQLMLLPQQIGNLTGLRELNMMW---CEKLAALPPQVGFLHEL 193


>gi|30692151|ref|NP_190034.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644385|gb|AEE77906.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1194

 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 173/378 (45%), Gaps = 54/378 (14%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L +L L + +S+ E+PSSIE LT L++L L+ C +L  LP   ++ K LR L+L
Sbjct: 733  LSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATK-LRELKL 791

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              CS L + P  + +  +L +L + G +S+ ++PSSI  +  LE+  L+ C +LV LPSS
Sbjct: 792  QNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSS 851

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
            I  L++L  L + GC KLE +P  +  ++SL+ L+++  +  +    I    +   L  +
Sbjct: 852  IGNLQNLCKLIMRGCSKLEALPININ-LKSLDTLNLTDCSQLKSFPEISTHISELRLKGT 910

Query: 179  GCNEPPAS-ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
               E P S  SW    P      S     +  P    +  +TKL LS             
Sbjct: 911  AIKEVPLSIMSWS---PLADFQISYFESLMEFPHAFDI--ITKLHLS------------- 952

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
                          +   +P  +  +  L +L L +C  L SLPQ+  +L ++ A+ C S
Sbjct: 953  -------------KDIQEVPPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKS 999

Query: 298  LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
            L  L         +     C       + N  A  ++               +  +FPG+
Sbjct: 1000 LERLDCCFNNPEIRLYFPKC------FKLNQEARDLIMHTC-----------IDAMFPGT 1042

Query: 358  QIPKWFMYQ-NEGSSITV 374
            Q+P  F+++   G S+ +
Sbjct: 1043 QVPACFIHRATSGDSLKI 1060



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + + + EL L+I     L QL ++GC +L +LP +I  +  L   +LS  S     P 
Sbjct: 791 LQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPS 850

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
              +   L ++ + G + +  LP +I L S + L NL DC  LKS P     +  LR+
Sbjct: 851 SIGNLQNLCKLIMRGCSKLEALPININLKSLDTL-NLTDCSQLKSFPEISTHISELRL 907


>gi|5823585|emb|CAB53784.1| disease resistance protein rps4-RLD [Arabidopsis thaliana]
          Length = 1217

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 169/381 (44%), Gaps = 78/381 (20%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            L+ L L+GC  L + P  +  +K L  L L GC+ L+  P++  ++  L  L L G ++ 
Sbjct: 685  LQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTF 742

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             E P    +   +E LYL+    + +LP ++  L+ L  LN+  C  LE +P  +G++++
Sbjct: 743  KEFPL---ISDNIETLYLDGTA-ISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKA 798

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L+EL +S               NL+         P    S+   L   LL  ++  V   
Sbjct: 799  LQELILSDCL------------NLKIF-------PEIDISF---LNILLLDGTAIEVMPQ 836

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
            LPS+  +C                               L+RN  ++ LP  IS L  L+
Sbjct: 837  LPSVQYLC-------------------------------LSRNAKISCLPVGISQLSQLK 865

Query: 268  ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINCIDSL 321
             L+L+ C  L S+P+ PPNLQ + A+GCSSL T+   L          S +   NC ++L
Sbjct: 866  WLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC-ENL 924

Query: 322  KLLRKNGLAISMLREYLELQAVSDPGHK--------LSIVFPGSQIPKWFMYQNEGSSIT 373
            +   K  +  S  +   +L + +   H          S  FPG ++P WF ++  GS + 
Sbjct: 925  EQAAKEEIT-SYAQRKCQLLSYARKRHNGGLVSESLFSTCFPGCEVPSWFCHETVGSELE 983

Query: 374  VTRPSYLYNVNKVVGFAICCV 394
            V    + ++  K+ G A+C V
Sbjct: 984  VKLLPHWHD-KKLAGIALCAV 1003



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 8/160 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  + L  L L+G T++   P  ++ +  L  L LKGC +L SLP    +L  L+TL L
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTL 736

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS  K+FP I  ++E    LYLDGT+I+++P ++E L  L +L + +CK L  +P  +
Sbjct: 737 SGCSTFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRV 793

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             LK+L+ L LS C  L+  P+    +  L  L + GTAI
Sbjct: 794 GELKALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI 831



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 8/184 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  LYLDGT+I+++P ++E L  L +L +K CK L  +P  +  LK L+ L LS C  L
Sbjct: 751 NIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNL 810

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K FP+I  S   L+ L LDGT+I  +P     LP ++ L L+    +  LP  I+ L  L
Sbjct: 811 KIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIF-LMKNLRSLYFSGCNEP 183
           K L+L  C  L +VP+    ++ L+    S    + +P + I    +N  +  F+ C   
Sbjct: 865 KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENL 924

Query: 184 PASA 187
             +A
Sbjct: 925 EQAA 928



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 5/108 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L GC +LE LP     L  L TL LSG S F+EFP I+   D +  ++L+GTAI 
Sbjct: 709 LAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLIS---DNIETLYLDGTAIS 763

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            LP ++E L   ++ N+KDCK L+ +P  +  L++L+ +  S C  LK
Sbjct: 764 QLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 27/200 (13%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP    +I  +  DGT I +L + +E L  LV L +  CK LE +P  +  LK L  L 
Sbjct: 744 EFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELI 803

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP-------------ASIELLSGNI--L 756
           LS     + FPEI  S   +L   L+GTAI  +P             A I  L   I  L
Sbjct: 804 LSDCLNLKIFPEIDISFLNIL--LLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQL 861

Query: 757 SNLK--DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKM 814
           S LK  D K   SL S      +L+ +   GCS LK V++ L ++   E   S++     
Sbjct: 862 SQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC 921

Query: 815 QNDFDCVEQSAVETVTKLAK 834
           +N    +EQ+A E +T  A+
Sbjct: 922 EN----LEQAAKEEITSYAQ 937


>gi|297794871|ref|XP_002865320.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297311155|gb|EFH41579.1| hypothetical protein ARALYDRAFT_330904 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1156

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 196/456 (42%), Gaps = 78/456 (17%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++ K+L  L L+G TS+ ++P  +E +  L  L ++GCK+L+ L     +L  L  L L
Sbjct: 724  LSNAKNLERLNLEGCTSLLKLPKEMENMESLVFLNMRGCKSLTFLHRM--NLSSLTILIL 781

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            S CSKL++F  I    E+L  LYLDGT+I  +P ++  L  L +L +  C  L  LP  +
Sbjct: 782  SDCSKLEEFEVI---SENLEALYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPECL 838

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
               K+L+ L LS C KLE+VP  +  ++ L  L + GT I+                   
Sbjct: 839  GKQKALEELILSNCSKLESVPKAVKNMKKLRILLLDGTRIK------------------- 879

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
             + P  ++   L L  N+       +  +  SL+G  +L  + + +C      +PS   +
Sbjct: 880  -DIPKINSLERLSLSRNI------AMIHLQDSLSGFSNLKCVVMKNCE-NLRYLPSLPRS 931

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            L  L      R   V  P    G  N+ +LE           +I     F   N      
Sbjct: 932  LEYLNVYGCERLETVENPLVFRGFFNVIQLE-----------KIRSTFLFTNCN------ 974

Query: 300  TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
             LF   K   S Y    C         + LA+    +  +L  VS  G   +  +PG  +
Sbjct: 975  NLFQDAKESISSYAKWKC---------HRLAL----DCYQLGIVS--GAFFNTCYPGFIV 1019

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
            P WF YQ  GS       S+  N N + G A+C V  V  H     +  S+    ++C++
Sbjct: 1020 PSWFHYQAVGSVFEPRLKSHWCN-NMLYGIALCAV--VSFHENQDPIIDSF---SVKCTL 1073

Query: 420  DGSGE-GHYIYFR------GKFGHVVSDHLWLLFLP 448
                E G  I F        K G + +DH+++ ++P
Sbjct: 1074 QFENEDGSRIRFDCDIGSLTKPGRIGADHVFIGYVP 1109



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 5/146 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + +L   +E +  LV L + GCK+L  L R    L  L+ L LS  SK  EF  I+ +
Sbjct: 739 TSLLKLPKEMENMESLVFLNMRGCKSLTFLHRM--NLSSLTILILSDCSKLEEFEVISEN 796

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + L   +L+GTAI+GLP ++  L    + N+K C  L+SLP  +   ++L  +  S CS
Sbjct: 797 LEAL---YLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPECLGKQKALEELILSNCS 853

Query: 788 KLKNVTETLGKVESLEVRLSSWNRPK 813
           KL++V + +  ++ L + L    R K
Sbjct: 854 KLESVPKAVKNMKKLRILLLDGTRIK 879



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 25/172 (14%)

Query: 646 NCSRLWEEADEFPDIVQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           +CS+L EE +   + ++ L  DGT I+ L   +  L  L  L + GC  LE LP  +   
Sbjct: 783 DCSKL-EEFEVISENLEALYLDGTAIKGLPPTVRDLKRLAILNMKGCTELESLPECLGKQ 841

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL----LSGNI----- 755
           K L  L LS  SK    P+   +  +L  + L+GT I+ +P    L    LS NI     
Sbjct: 842 KALEELILSNCSKLESVPKAVKNMKKLRILLLDGTRIKDIPKINSLERLSLSRNIAMIHL 901

Query: 756 ------LSNL-----KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
                  SNL     K+C+NL+ LPS     RSL  +   GC +L+ V   L
Sbjct: 902 QDSLSGFSNLKCVVMKNCENLRYLPSLP---RSLEYLNVYGCERLETVENPL 950


>gi|7635470|emb|CAB88530.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1220

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 174/378 (46%), Gaps = 54/378 (14%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L +L L + +S+ E+PSSIE LT L++L L+ C +L  LP   ++ K LR L+L
Sbjct: 733  LSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLENCSSLEKLPAIENATK-LRELKL 791

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              CS L + P  + +  +L +L + G +S+ ++PSSI  +  LE+  L+ C +LV LPSS
Sbjct: 792  QNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPSS 851

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
            I  L++L  L + GC KLE +P  +  ++SL+ L+++  +  +    I    +   L  +
Sbjct: 852  IGNLQNLCKLIMRGCSKLEALPININ-LKSLDTLNLTDCSQLKSFPEISTHISELRLKGT 910

Query: 179  GCNEPPAS-ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
               E P S  SW    P      S     +  P    +  +TKL LS           DI
Sbjct: 911  AIKEVPLSIMSWS---PLADFQISYFESLMEFPHAFDI--ITKLHLS----------KDI 955

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
              +                P  +  +  L +L L +C  L SLPQ+  +L ++ A+ C S
Sbjct: 956  QEV----------------PPWVKRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKS 999

Query: 298  LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
            L  L         +     C       + N  A  ++               +  +FPG+
Sbjct: 1000 LERLDCCFNNPEIRLYFPKC------FKLNQEARDLIMHTC-----------IDAMFPGT 1042

Query: 358  QIPKWFMYQ-NEGSSITV 374
            Q+P  F+++   G S+ +
Sbjct: 1043 QVPACFIHRATSGDSLKI 1060



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + + + EL L+I     L QL ++GC +L +LP +I  +  L   +LS  S     P 
Sbjct: 791 LQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIGDITDLEVFDLSNCSSLVTLPS 850

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
              +   L ++ + G + +  LP +I L S + L NL DC  LKS P     +  LR+
Sbjct: 851 SIGNLQNLCKLIMRGCSKLEALPININLKSLDTL-NLTDCSQLKSFPEISTHISELRL 907


>gi|224131094|ref|XP_002328452.1| predicted protein [Populus trichocarpa]
 gi|222838167|gb|EEE76532.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 136/291 (46%), Gaps = 40/291 (13%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +K L+ L L G   +  +P +I  L  L  L +  C  L+SLP +I  L+ L  L +
Sbjct: 269 ICKLKCLAKLNLGGQPKLANLPDNIGELRSLAELNVYSCSKLASLPDSIGELRSLGALNV 328

Query: 60  SGCSKLKKFPQIVASMEDL--------------SKLYLDGTSIAEVPSSIELLPGLELLY 105
             C  L   P  +  +  L              ++ Y D   +A +P SI  L  L+ L 
Sbjct: 329 FSCLGLASLPDSIGGLRSLHCALYYLLLRTSKSTRQYCDSPGLASLPDSIGALKSLKWLD 388

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTS 164
           L+ C  L  LP SI  LKSLK L+LSGC  L ++PD++G ++SL+ LD+S +  +     
Sbjct: 389 LSCCSGLASLPDSIGALKSLKCLDLSGCSGLASLPDSIGALKSLKRLDLSDSPGLASLPD 448

Query: 165 SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
           SI  +K+L  L  SGC+                 G  S P      S+  + SL  LDL 
Sbjct: 449 SIGALKSLEWLDLSGCS-----------------GLVSLP-----DSICALKSLQLLDLI 486

Query: 225 DCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDC 274
            C  G A++P  I  L  L+ L L   +   +LP SI  L  LE L+L DC
Sbjct: 487 GCS-GLASLPDRIGELKYLESLELCGCSGLASLPDSIYELKCLEWLDLSDC 536



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 146/305 (47%), Gaps = 42/305 (13%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P +I+ L  L  L L  C  L  LP +I  LKCL  L L G  KL   P  +  +
Sbjct: 237 SLASLPDNIDELKSLVELDLYSCSKLVRLPNSICKLKCLAKLNLGGQPKLANLPDNIGEL 296

Query: 76  EDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL--------- 125
             L++L +   S +A +P SI  L  L  L +  C  L  LP SI GL+SL         
Sbjct: 297 RSLAELNVYSCSKLASLPDSIGELRSLGALNVFSCLGLASLPDSIGGLRSLHCALYYLLL 356

Query: 126 ----KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
                T        L ++PD++G ++SL+ LD+S  + +     SI  +K+L+ L  SGC
Sbjct: 357 RTSKSTRQYCDSPGLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKSLKCLDLSGC 416

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           +                 G +S P      S+  + SL +LDLSD   G A++P  I  L
Sbjct: 417 S-----------------GLASLP-----DSIGALKSLKRLDLSDSP-GLASLPDSIGAL 453

Query: 241 HSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCS 296
            SL+ L L+  +  V+LP SI  L +L+ L+L  C  L SLP     L+++ +    GCS
Sbjct: 454 KSLEWLDLSGCSGLVSLPDSICALKSLQLLDLIGCSGLASLPDRIGELKYLESLELCGCS 513

Query: 297 SLVTL 301
            L +L
Sbjct: 514 GLASL 518



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 144/278 (51%), Gaps = 26/278 (9%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           +P +I     L TLEL    + + F  + +S+  L+  + +  S+A +P +I+ L  L  
Sbjct: 199 IPSSIKYSTRLTTLELP---RFESFCTLPSSILRLNLSFCE--SLASLPDNIDELKSLVE 253

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRP 162
           L L  C  LVRLP+SI  LK L  LNL G  KL N+PD +G++ SL EL+V S + +   
Sbjct: 254 LDLYSCSKLVRLPNSICKLKCLAKLNLGGQPKLANLPDNIGELRSLAELNVYSCSKLASL 313

Query: 163 TSSIFLMKNLRSL-YFS--GCNEPPASA----SWHLHLPFNLLGKS-------SCPVALM 208
             SI  +++L +L  FS  G    P S     S H  L + LL  S         P    
Sbjct: 314 PDSIGELRSLGALNVFSCLGLASLPDSIGGLRSLHCALYYLLLRTSKSTRQYCDSPGLAS 373

Query: 209 LP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNL 266
           LP S+  + SL  LDLS C  G A++P  I  L SLK L L+  +   +LP SI  L +L
Sbjct: 374 LPDSIGALKSLKWLDLSCCS-GLASLPDSIGALKSLKCLDLSGCSGLASLPDSIGALKSL 432

Query: 267 EELELEDCKRLQSLPQ---IPPNLQFVRANGCSSLVTL 301
           + L+L D   L SLP       +L+++  +GCS LV+L
Sbjct: 433 KRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSL 470



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++K L  L L D   +  +P SI  L  LE L L GC  L SLP +I +LK L+ L+L
Sbjct: 426 IGALKSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQLLDL 485

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKN 111
            GCS L   P  +  ++ L  L L G S +A +P SI  L  LE L L++C +
Sbjct: 486 IGCSGLASLPDRIGELKYLESLELCGCSGLASLPDSIYELKCLEWLDLSDCSD 538



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D   +  L  +I  L  L  L L+ C  L  LP +I ALK L  L+LSG S     P+  
Sbjct: 367 DSPGLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKSLKCLDLSGCSGLASLPDSI 426

Query: 726 SSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
            +   L  + L +   +  LP SI  L      +L  C  L SLP +I  L+SL+++   
Sbjct: 427 GALKSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQLLDLI 486

Query: 785 GCSKLKNVTETLGKVESLE 803
           GCS L ++ + +G+++ LE
Sbjct: 487 GCSGLASLPDRIGELKYLE 505



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 1/103 (0%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           I+ L  LV+L L  C  L RLP +I  LK L+ LNL G  K    P+       L E+++
Sbjct: 245 IDELKSLVELDLYSCSKLVRLPNSICKLKCLAKLNLGGQPKLANLPDNIGELRSLAELNV 304

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
              + +  LP SI  L      N+  C  L SLP +I GLRSL
Sbjct: 305 YSCSKLASLPDSIGELRSLGALNVFSCLGLASLPDSIGGLRSL 347



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  L  L  L L+GC  L  LP +I ALK L  L+LS        P+   +   L  + 
Sbjct: 401 SIGALKSLKCLDLSGCSGLASLPDSIGALKSLKRLDLSDSPGLASLPDSIGALKSLEWLD 460

Query: 736 LEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L G + +  LP SI  L    L +L  C  L SLP  I  L+ L  +   GCS L ++ +
Sbjct: 461 LSGCSGLVSLPDSICALKSLQLLDLIGCSGLASLPDRIGELKYLESLELCGCSGLASLPD 520

Query: 795 TLGKVESLE 803
           ++ +++ LE
Sbjct: 521 SIYELKCLE 529



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELL 751
            L  LP +I ALK L  L+LS  S     P+   +   L  + L G + +  LP SI  L
Sbjct: 370 GLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKSLKCLDLSGCSGLASLPDSIGAL 429

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
                 +L D   L SLP +I  L+SL  +  SGCS L ++ +++  ++SL++
Sbjct: 430 KSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQL 482



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL-------- 731
           L  L +L +  C  L  LP +I  L+ L  LN+         P+       L        
Sbjct: 296 LRSLAELNVYSCSKLASLPDSIGELRSLGALNVFSCLGLASLPDSIGGLRSLHCALYYLL 355

Query: 732 ------LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
                    + +   +  LP SI  L      +L  C  L SLP +I  L+SL+ +  SG
Sbjct: 356 LRTSKSTRQYCDSPGLASLPDSIGALKSLKWLDLSCCSGLASLPDSIGALKSLKCLDLSG 415

Query: 786 CSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCV 821
           CS L ++ +++G ++SL+ RL   + P + +  D +
Sbjct: 416 CSGLASLPDSIGALKSLK-RLDLSDSPGLASLPDSI 450



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 1/102 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD   +  L  +I  L  L  L L+GC  L  LP +I ALK L  L+L G S     P+
Sbjct: 437 LSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPDSICALKSLQLLDLIGCSGLASLPD 496

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKN 764
                  L  + L G + +  LP SI  L      +L DC +
Sbjct: 497 RIGELKYLESLELCGCSGLASLPDSIYELKCLEWLDLSDCSD 538



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + +  L  +I  L  L +L L+    L  LP +I ALK L  L+LSG S     P+
Sbjct: 413 LSGCSGLASLPDSIGALKSLKRLDLSDSPGLASLPDSIGALKSLEWLDLSGCSGLVSLPD 472

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  + L G + +  LP  I  L       L  C  L SLP +I  L+ L  + 
Sbjct: 473 SICALKSLQLLDLIGCSGLASLPDRIGELKYLESLELCGCSGLASLPDSIYELKCLEWLD 532

Query: 783 PSGCS 787
            S CS
Sbjct: 533 LSDCS 537


>gi|12056928|gb|AAG48132.1|AF322632_1 putative resistance protein [Glycine max]
          Length = 1093

 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 190/438 (43%), Gaps = 55/438 (12%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
            +R L    C  L + P +          ++   ++ E+  S+  L  LE++    C  L 
Sbjct: 623  MRVLNFDRCEFLTRTPDLSGFPILKELFFVFCENLVEIHDSVGFLDKLEIMNFEGCSKLE 682

Query: 114  RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
              P     L SL+++NLS C  L + P+ LGK+E++  L +  TAI +  +SI  +  L+
Sbjct: 683  TFPPI--KLTSLESINLSHCSSLVSFPEILGKMENITHLSLEYTAISKLPNSIRELVRLQ 740

Query: 174  SLYFSGCNEPPASASWHLHLPFNLLGKSSCP-------------VALMLPSLTGVCSLTK 220
            SL    C      +S        +L    C               +L++PS      L +
Sbjct: 741  SLELHNCGMVQLPSSIVTLRELEVLSICQCEGLRFSKQDEDVKNKSLLMPS----SYLKQ 796

Query: 221  LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
            ++L  C + +  I + +    ++K L L+ NNF  LP+ I     L +L L+ C  L  +
Sbjct: 797  VNLWSCSISDEFIDTGLAWFANVKSLDLSANNFTILPSCIQECRLLRKLYLDYCTHLHEI 856

Query: 281  PQIPPNLQFVRANGCSSLVTLFGALKL------CRSKYTIINCIDSLKLLRKNGLAISML 334
              IPPNL+ + A  C+SL  L  A+ L      C  +  I++  ++L+ +R    +I  L
Sbjct: 857  RGIPPNLETLSAIRCTSLKDLDLAVPLESTKEGCCLRQLILDDCENLQEIRGIPPSIEFL 916

Query: 335  ------------REYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYN 382
                        R  L  Q + + G+K     PG++IP+WF + + G SI+       + 
Sbjct: 917  SATNCRSLTASCRRMLLKQELHEAGNK-RYSLPGTRIPEWFEHCSRGQSIS------FWF 969

Query: 383  VNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHL 442
             NK    ++C    + KH  G     S   ++++       +  + YF      V++DH+
Sbjct: 970  RNKFPVISLCLAGLMHKHPFGLKPIVSINGNKMKTEF----QRRWFYFEFP---VLTDHI 1022

Query: 443  WLLFLPRHGHNWQFESNL 460
             L+F  R     +FE N+
Sbjct: 1023 -LIFGER---QIKFEDNV 1036



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  ++  L  L  +   GC  LE  P     L  L ++NLS  S    FPEI    + +
Sbjct: 659 EIHDSVGFLDKLEIMNFEGCSKLETFPPI--KLTSLESINLSHCSSLVSFPEILGKMENI 716

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
             + LE TAI  LP SI  L       L +C  +  LPS+I  LR L ++    C  L+
Sbjct: 717 THLSLEYTAISKLPNSIRELVRLQSLELHNC-GMVQLPSSIVTLRELEVLSICQCEGLR 774



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 40/234 (17%)

Query: 591 ASHLMCC----INSMVSQAKAISQQGQFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGN 646
            +H  CC    I ++V ++  +  +   V+M  +        ++ GR+ VR++SP+ PG 
Sbjct: 459 GAHHGCCLKFHIGALVEKSLIMIDEHGRVQMHDL-------IQQMGREIVRQESPEHPGK 511

Query: 647 CSRLWEEADEFPDIVQVLSDGT---DIRELSLAIELLFGLVQL------------TLNGC 691
            SRLW       DIV VL D T    I+ + L       +VQ             TL   
Sbjct: 512 RSRLWSTE----DIVHVLEDNTGTCKIQSIILDFSKSEKVVQWDGMAFVKMISLRTLIIR 567

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREF-PEITSSRDQLLEIHLEGTAIRGLPASIEL 750
           K   + P+    LK L        S   +F PE    +  +L++   G     LP     
Sbjct: 568 KMFSKGPKNFQILKMLEWWGCPSKSLPSDFKPE----KLAILKLPYSGFMSLELP---NF 620

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           L   +L N   C+ L   P  ++G   L+ ++   C  L  + +++G ++ LE+
Sbjct: 621 LHMRVL-NFDRCEFLTRTPD-LSGFPILKELFFVFCENLVEIHDSVGFLDKLEI 672


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 140/281 (49%), Gaps = 30/281 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L++LYL G  +T VP+ I  LT L  L L G + L+S+P  +  L  LR L L 
Sbjct: 48  IGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGNQ-LTSVPAEVGQLTSLRELHLW 106

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L +L LD   +  VP+ I  L  LE LYL     L  +P+ I 
Sbjct: 107 N-NRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEIGQLTSLERLYLG-GNQLTSVPAEIG 164

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ LNL    +L +VP  +G++ SLE+L+++G  +    + I  + +L+ L  +G 
Sbjct: 165 RLTSLEELNLK-SNQLTSVPAEIGQLASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGN 223

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               +S P       +  +  L +L L D  L   ++P++I  L
Sbjct: 224 Q------------------LTSVPA-----DIGQLTDLKELGLRDNQL--TSVPAEIGQL 258

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            SL++LY+  N   ++PA I  L +LE LEL+D  +L S+P
Sbjct: 259 ASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDD-NQLTSVP 298



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 141/286 (49%), Gaps = 15/286 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  LY+ G  +T VP+ I  LT LE L L   + L+S+P  I  L  LR L L 
Sbjct: 255 IGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQ-LTSVPAEIWQLTSLRVLYLD 313

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L++LYL G  +  VP+ I  L  L+ L L + + L  +P  I 
Sbjct: 314 D-NQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQ-LTSVPEEIW 371

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ L L     L+ +P  +G++ SLEEL +    +    + I+ + +L  LY  GC
Sbjct: 372 QLTSLRVLYLDDNL-LDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYL-GC 429

Query: 181 NE---PPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
           N+    PA       L    L G     V   +  LT   SL  L L    L   ++P++
Sbjct: 430 NQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLT---SLRVLYLYGNQL--TSLPAE 484

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           I  L SL+ELYLN     ++PA I  L  L+EL+L D K L S+P+
Sbjct: 485 IGQLASLRELYLNGKQLTSVPAEIGQLTELKELDLRDNK-LTSVPE 529



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 138/286 (48%), Gaps = 33/286 (11%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYLD   +T VP+ I  LT L  L L G + L+S+P  I  L  L+ L L   ++L   P
Sbjct: 310 LYLDDNQLTSVPAEIGQLTSLTELYLSGNQ-LTSVPAEIGRLTELKELGLRD-NQLTSVP 367

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           + +  +  L  LYLD   + E+P+ I  L  LE L L E   L  +P+ I  L SL  L 
Sbjct: 368 EEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGL-ERNELTSVPAEIWQLTSLTELY 426

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           L GC +L +VP  +G++ SL +L +SGT +    + I  + +LR LY  G          
Sbjct: 427 L-GCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQ-------- 477

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
                      +S P       +  + SL +L L+   L   ++P++I  L  LKEL L 
Sbjct: 478 ----------LTSLPA-----EIGQLASLRELYLNGKQL--TSVPAEIGQLTELKELDLR 520

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
            N   ++P  I  L +L  L L+D +    L  +P  ++ ++A GC
Sbjct: 521 DNKLTSVPEEIWQLTSLRVLYLDDNQ----LTSVPAAIRELKAAGC 562



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 135/273 (49%), Gaps = 30/273 (10%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           +L LDG  +T VP+ I  LT LE+L L   + L+S+P  I  L  L  L L G ++L   
Sbjct: 10  ELALDGNELTSVPAEIGQLTSLEVLDLYNNQ-LTSVPAEIGQLTSLTELYLFG-NQLTSV 67

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           P  +  +  L+ L L G  +  VP+ +  L  L  L+L   + L  +P+ I  L SL+ L
Sbjct: 68  PAEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNR-LTSVPAEIGQLTSLEEL 126

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
            L    +L +VP  +G++ SLE L + G  +    + I  + +L                
Sbjct: 127 CLDDN-RLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLE--------------- 170

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
             L+L  N L  +S P       +  + SL KL+L+   L   ++P++I  L SLKEL L
Sbjct: 171 -ELNLKSNQL--TSVPA-----EIGQLASLEKLNLNGNQL--TSVPAEIGQLTSLKELDL 220

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           N N   ++PA I  L +L+EL L D  +L S+P
Sbjct: 221 NGNQLTSVPADIGQLTDLKELGLRD-NQLTSVP 252


>gi|218189697|gb|EEC72124.1| hypothetical protein OsI_05113 [Oryza sativa Indica Group]
          Length = 995

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 127/241 (52%), Gaps = 12/241 (4%)

Query: 11  YLD---GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
           YLD    +++ ++PSS+  L  L  L L GC  L  LP +I++LKCL+ L++SGC  L+K
Sbjct: 664 YLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQK 723

Query: 68  FPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            P    S+  LS + L   S + ++P S+  L  LE L L++C  L +LP  +  L  L+
Sbjct: 724 LPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYRLE 782

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L++S C +++ +P T  +++ L+ L++S     I+ P      +  L+SL  + C++  
Sbjct: 783 VLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLP-ECFGDLSELQSLNLTSCSK-L 840

Query: 185 ASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            S  W L   FNL  L  S C     LPS  G   L  LDL+ C      +P  I N+ S
Sbjct: 841 QSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGYLRLQVLDLTGC-YNMHGLPDSISNMSS 899

Query: 243 L 243
           L
Sbjct: 900 L 900



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 30/289 (10%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +++++  L L   S+  +P++I  L  L  L L    NL+ LP +++ L  L  L LSGC
Sbjct: 635 TLQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGC 694

Query: 63  SKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           +KL++ P+ + +++ L  L + G  ++ ++P     L  L  + L+ C  L +LP S+N 
Sbjct: 695 AKLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN- 753

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGC 180
           L+SL+ L LS C +LE +P+ LG +  LE LD+S     +     F  +K+L+ L  S C
Sbjct: 754 LESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDC 813

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
           +                         + LP   G +  L  L+L+ C   + ++P  + N
Sbjct: 814 HG-----------------------LIQLPECFGDLSELQSLNLTSCSKLQ-SLPWSLCN 849

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           + +LK L L+   +  +LP+S+ G L L+ L+L  C  +  LP    N+
Sbjct: 850 MFNLKHLNLSYCVSLESLPSSL-GYLRLQVLDLTGCYNMHGLPDSISNM 897



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 28/262 (10%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           LP +I  L  L  L++SG   +   P+   +++++  L L   S+  +P++I  L  L  
Sbjct: 606 LPSSIRRLMLLGYLDVSGFPIIS-LPKSFHTLQNMQSLILSNCSLEILPANIGSLQKLCY 664

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L L+   NL +LPSS+  L  L  LNLSGC KLE +P+++  ++ L+ LD+SG    +  
Sbjct: 665 LDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKL 724

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
              F   +L  L F                  NL   SSC     LP    + SL  L L
Sbjct: 725 PGKF--GSLAKLSF-----------------VNL---SSCSKLTKLPDSLNLESLEHLIL 762

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQ 282
           SDC   E  +P D+ NL+ L+ L ++    V  LP +   L +L+ L L DC  L  LP+
Sbjct: 763 SDCHELE-QLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPE 821

Query: 283 IPPN---LQFVRANGCSSLVTL 301
              +   LQ +    CS L +L
Sbjct: 822 CFGDLSELQSLNLTSCSKLQSL 843



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   + ++P  +  L  LE+L +  C  +  LP T   LK L+ L LS C  L + P+  
Sbjct: 764 DCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECF 823

Query: 73  ASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             + +L  L L   S +  +P S+  +  L+ L L+ C +L  LPSS+  L+ L+ L+L+
Sbjct: 824 GDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGYLR-LQVLDLT 882

Query: 132 GCCKLENVPDTLGKVESLEELDVS 155
           GC  +  +PD++  + SL  L+ +
Sbjct: 883 GCYNMHGLPDSISNMSSLTLLNTA 906



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L L+   NL +LP +++ L  L  LNLSG +K  E PE  ++   L  + + G  A+
Sbjct: 662 LCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCAL 721

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP     L+     NL  C  L  LP ++N L SL  +  S C +L+ + E LG +  
Sbjct: 722 QKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYR 780

Query: 802 LEV 804
           LEV
Sbjct: 781 LEV 783



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  +++ +L  ++  L  L  L L+GC  LE LP +I+ LK L  L++SG    ++ P 
Sbjct: 667 LSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPG 726

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S  +L  ++L   + +  LP S+ L S   L  L DC  L+ LP  +  L  L ++ 
Sbjct: 727 KFGSLAKLSFVNLSSCSKLTKLPDSLNLESLEHLI-LSDCHELEQLPEDLGNLYRLEVLD 785

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            S C +++ + +T  +++ L+
Sbjct: 786 MSDCYRVQVLPKTFCQLKHLK 806



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 2/141 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LSD  ++ +L   +  L+ L  L ++ C  ++ LP+T   LK+L  LNLS      + P
Sbjct: 761 ILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLP 820

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           E      +L  ++L   + ++ LP S+  +      NL  C +L+SLPS++  LR L+++
Sbjct: 821 ECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGYLR-LQVL 879

Query: 782 YPSGCSKLKNVTETLGKVESL 802
             +GC  +  + +++  + SL
Sbjct: 880 DLTGCYNMHGLPDSISNMSSL 900



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 686 LTLNGCKNLER-------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L L+G  N E+       LP +I  L  L  L++SG       P+   +   +  + L  
Sbjct: 588 LDLSGLSNEEQSTPSNPVLPSSIRRLMLLGYLDVSGFPII-SLPKSFHTLQNMQSLILSN 646

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            ++  LPA+I  L      +L    NL  LPS++  L  L  +  SGC+KL+ + E++  
Sbjct: 647 CSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINN 706

Query: 799 VESLE 803
           ++ L+
Sbjct: 707 LKCLQ 711


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 22/283 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L     T +P  +E L  L+ L L G   L++LP  I  LK LR LEL+
Sbjct: 88  IGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYL-GSNQLTTLPNEIGQLKNLRVLELT 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++ K  P+ +  +++L  L L    +  +P+ I  L  L+ LYL     L  LP+ I 
Sbjct: 147 -HNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLG-SNQLTALPNEIG 204

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY--FS 178
            L++L++L LS   +L  +P+ +G++++L+ L +    +    + I  +KNL++LY  ++
Sbjct: 205 QLQNLQSLYLS-TNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYN 263

Query: 179 GCNEPPASAS-----WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
                P           L L +N L          LP   G+  L  L   D G  +  I
Sbjct: 264 QFTTLPKEIGKLQNLQRLELNYNQLK--------TLPK--GIGQLQNLQWLDLGYNQFTI 313

Query: 234 -PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            P +I  L +L+ELYL  N   T+P  I  L NL+EL L D +
Sbjct: 314 LPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDNQ 356



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 105/251 (41%), Gaps = 35/251 (13%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           D+  L L       +P  I  L  L+ L LN+ + L  LP  I  LK+L+ LNL    + 
Sbjct: 47  DVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIGQLKNLRKLNLYD-NQF 104

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
             +P  + K+E+L+EL +    +    + I  +KNLR L  +             H  F 
Sbjct: 105 TILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELT-------------HNQFK 151

Query: 197 LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLHSLKELYLNRNNFVT 255
            + K              +  L  L   + G  +  A+P++I  L +L+ LYL  N    
Sbjct: 152 TIPKE-------------IGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTA 198

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALKLCRS 310
           LP  I  L NL+ L L    RL +LP     LQ     ++ +N  + L    G LK  ++
Sbjct: 199 LPNEIGQLQNLQSLYL-STNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQT 257

Query: 311 KYTIINCIDSL 321
            Y   N   +L
Sbjct: 258 LYLRYNQFTTL 268


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 19/318 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L++LYL    +  +P  I  L  +E L+L   + L++LP  I  LK LR L+L+
Sbjct: 59  IGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQ-LTTLPKDIGKLKKLRELDLT 117

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + L   P+ +  +++L +LYL    +  +P  I  L  L  LYL+  + L  LP  I 
Sbjct: 118 N-NLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQ-LKTLPKDIG 175

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L++L+ LNL G  +L+ +P  +GK+++L EL+++   +      I  +KNL  L    +
Sbjct: 176 QLQNLRELNLDGN-QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 234

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG     +   LP+  G + SL +L+LS   +    +P DI
Sbjct: 235 ELTTLPKEIGKLKNLQVLYLG----ALLTTLPNDIGYLKSLRELNLSGNQI--TTLPKDI 288

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR-----A 292
             L +L+ LYL+ N   TLP  I  L NL EL+L    ++ +LP+    LQ +R      
Sbjct: 289 GQLQNLQVLYLSENQLATLPKEIGQLQNLRELDL-SGNQITTLPKDIGELQSLRELNLSG 347

Query: 293 NGCSSLVTLFGALKLCRS 310
           N  ++L    G L+  R 
Sbjct: 348 NQITTLPKEIGKLQSLRE 365



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 13/277 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +  +P  I  L  L  L L   + L +LP  I  L+ LR L L 
Sbjct: 128 IGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQ-LKTLPKDIGQLQNLRELNLD 186

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL-ELLYLNECKNLVRLPSSI 119
           G ++LK  P+ +  +++L++L L    +  +P  I  L  L ELL +N    L  LP  I
Sbjct: 187 G-NQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN--NELTTLPKEI 243

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK+L+ L L     L  +P+ +G ++SL EL++SG  I      I  ++NL+ LY S 
Sbjct: 244 GKLKNLQVLYLGAL--LTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLS- 300

Query: 180 CNEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                A+    +    NL  L  S   +  +   +  + SL +L+LS   +    +P +I
Sbjct: 301 -ENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQI--TTLPKEI 357

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
             L SL+EL L  N   T+P  I  L NL+ L L+D 
Sbjct: 358 GKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDI 394



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 27/168 (16%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP  I  L++L  L LS   +L+ +P  +GK++ +E L +S   +      I  +K LR 
Sbjct: 55  LPKEIGELQNLTELYLS-SNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRE 113

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
           L  +                 NLL  ++ P       +  + +L +L L++  L    +P
Sbjct: 114 LDLTN----------------NLL--TTLP-----KDIGQLQNLRELYLTNNQL--KTLP 148

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            DI  L +L+ELYL+ N   TLP  I  L NL EL L D  +L++LP+
Sbjct: 149 KDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELNL-DGNQLKTLPK 195



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 34/191 (17%)

Query: 652 EEADEFPDIVQVLSDGTDIRELSL--------AIELLFGLVQLTLNGCKNLERLPRTISA 703
           +E   + ++ + L + TD+R LSL         I  L  L +L L+  + L+ LP+ I  
Sbjct: 26  QEIGTYHNLTEALQNPTDVRILSLHNNETLPKEIGELQNLTELYLSSNQ-LKTLPKEIGK 84

Query: 704 LKYLSTLNLSG------------LSKFRE----------FPEITSSRDQLLEIHLEGTAI 741
           L+ +  L+LS             L K RE           P+       L E++L    +
Sbjct: 85  LQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQL 144

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP  I  L  N+     D   LK+LP  I  L++LR +   G ++LK + + +GK+++
Sbjct: 145 KTLPKDIGQLQ-NLRELYLDNNQLKTLPKDIGQLQNLRELNLDG-NQLKTLPKDIGKLQN 202

Query: 802 LEVRLSSWNRP 812
           L   L+  N P
Sbjct: 203 L-TELNLTNNP 212


>gi|147858878|emb|CAN82897.1| hypothetical protein VITISV_026993 [Vitis vinifera]
          Length = 607

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 178/414 (42%), Gaps = 61/414 (14%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ ++L     L + P   +S+ +L+ L LDG T + ++  S+  L  L  L L  C NL
Sbjct: 137 LKYMDLRHSKYLTETPDF-SSVTNLNSLILDGCTQLCKIHPSLGDLDKLTWLSLENCINL 195

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              P  I+ L SL+TL LSGC KLE   D    +  L +L + GTAI    SSI     L
Sbjct: 196 EHFPG-ISQLVSLETLILSGCSKLEKFLDISQHMPCLRQLYLDGTAITELPSSIDYATKL 254

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEA 231
             L    C +               L  S C + L+   SL+G CS    DL  C     
Sbjct: 255 EILDLRNCRK------------LRSLPSSICKLTLLWCLSLSG-CS----DLGKCE---- 293

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
                           +N  N   LP ++  L +L+ L L++C  L++LP +P +L  + 
Sbjct: 294 ----------------VNSGNLDALPGTLDQLCSLKMLFLQNCWSLRALPALPSSLVILN 337

Query: 292 ANGCSSL--VTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISML---------REYLEL 340
           A+ C SL  ++      LCR      NC    K   +    +  +         R   E 
Sbjct: 338 ASNCESLEDISPQSVFSLCRGS-IFRNCSKLTKFQSRMERDLQSMAAKVDQEKWRSTFEE 396

Query: 341 QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKH 400
           Q  S+   + S VFPGS IP WF ++++       + S  +  +  +GFA+C V   PK 
Sbjct: 397 QN-SEVDVQFSTVFPGSGIPDWFKHRSKRWRKIDMKVSPNWYTSNFLGFALCAVV-APKK 454

Query: 401 STGTYLFHSYPAHELEC--SMDGSGEGHYI---YFRG-KFGHVVSDHLWLLFLP 448
            + T  + +Y   E     S   S    +I   + RG K   + SDH+WL ++P
Sbjct: 455 KSLTSSWSAYCDLEFRALNSKWKSNRSFHIFDVFTRGLKDITIGSDHVWLAYVP 508



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 88/150 (58%), Gaps = 2/150 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +S+ +L+ L LDG T + ++  S+  L  L  L+L+ C NL   P  IS L  L TL L
Sbjct: 154 FSSVTNLNSLILDGCTQLCKIHPSLGDLDKLTWLSLENCINLEHFP-GISQLVSLETLIL 212

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCSKL+KF  I   M  L +LYLDGT+I E+PSSI+    LE+L L  C+ L  LPSSI
Sbjct: 213 SGCSKLEKFLDISQHMPCLRQLYLDGTAITELPSSIDYATKLEILDLRNCRKLRSLPSSI 272

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
             L  L  L+LSGC  L       G +++L
Sbjct: 273 CKLTLLWCLSLSGCSDLGKCEVNSGNLDAL 302



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L+L  C NLE  P  IS L  L TL LSG SK  +F +I+     L +++L+GTAI 
Sbjct: 184 LTWLSLENCINLEHFP-GISQLVSLETLILSGCSKLEKFLDISQHMPCLRQLYLDGTAIT 242

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP+SI+  +   + +L++C+ L+SLPS+I  L  L  +  SGCS L       G +++L
Sbjct: 243 ELPSSIDYATKLEILDLRNCRKLRSLPSSICKLTLLWCLSLSGCSDLGKCEVNSGNLDAL 302


>gi|15235924|ref|NP_193422.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
 gi|75097884|sp|O23530.3|SNC1_ARATH RecName: Full=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1;
            Short=AtSNC1; AltName: Full=Disease resistance RPP5-like
            protein
 gi|5302803|emb|CAB46044.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268440|emb|CAB80960.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658420|gb|AEE83820.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
          Length = 1301

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 142/292 (48%), Gaps = 22/292 (7%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+  +PS+I  L  L  L +K C  L  LP  ++ L  L TL+LSGCS L+ FP I    
Sbjct: 808  SLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDVN-LSSLETLDLSGCSSLRSFPLIST-- 864

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
             ++  LYL+ T+I E+PS+I  L  L  L + +C  L  LP+ +N L SL+TL+LSGC  
Sbjct: 865  -NIVWLYLENTAIEEIPSTIGNLHRLVRLEMKKCTGLEVLPTDVN-LSSLETLDLSGCSS 922

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHL 191
            L + P      ES++ L +  TAI      +    NL++L  + C      P    +   
Sbjct: 923  LRSFPLI---SESIKWLYLENTAIEE-IPDLSKATNLKNLKLNNCKSLVTLPTTIGNLQK 978

Query: 192  HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
             + F +     C    +LP    + SL  LDLS C       P    N+  L   YL   
Sbjct: 979  LVSFEM---KECTGLEVLPIDVNLSSLMILDLSGCS-SLRTFPLISTNIVWL---YLENT 1031

Query: 252  NFVTLPASISGLLNLEELELEDCKRLQSLPQIP--PNLQFVRANGCSSLVTL 301
                +P++I  L  L +LE+++C  L+ LP      +L  +  +GCSSL T 
Sbjct: 1032 AIEEIPSTIGNLHRLVKLEMKECTGLEVLPTDVNLSSLMILDLSGCSSLRTF 1083



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 141/281 (50%), Gaps = 21/281 (7%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            LYL+ T+I E+PS+I  L  L  L +K C  L  LP  ++ L  L TL+LSGCS L+ FP
Sbjct: 869  LYLENTAIEEIPSTIGNLHRLVRLEMKKCTGLEVLPTDVN-LSSLETLDLSGCSSLRSFP 927

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             I    E +  LYL+ T+I E+P  +     L+ L LN CK+LV LP++I  L+ L +  
Sbjct: 928  LIS---ESIKWLYLENTAIEEIPD-LSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFE 983

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--SGCNEPPASA 187
            +  C  LE +P  +  + SL  LD+SG +  R  +   +  N+  LY   +   E P++ 
Sbjct: 984  MKECTGLEVLPIDVN-LSSLMILDLSGCSSLR--TFPLISTNIVWLYLENTAIEEIPSTI 1040

Query: 188  SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKEL 246
              +LH    L  K  C    +LP+   + SL  LDLS C  L    + S       ++ L
Sbjct: 1041 G-NLHRLVKLEMKE-CTGLEVLPTDVNLSSLMILDLSGCSSLRTFPLIST-----RIECL 1093

Query: 247  YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            YL       +P  I     L  L +  C+RL++   I PN+
Sbjct: 1094 YLQNTAIEEVPCCIEDFTRLTVLMMYCCQRLKT---ISPNI 1131



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 128/296 (43%), Gaps = 55/296 (18%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            L  L ++G K+   L   I SL  L  ++LS    L + P       DLSK         
Sbjct: 752  LAFLNVRGYKH-EKLWEGIQSLGSLEGMDLSESENLTEIP-------DLSKA-------- 795

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
                       LE L LN CK+LV LPS+I  L  L  L +  C  LE +P  +  + SL
Sbjct: 796  ---------TKLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDVN-LSSL 845

Query: 150  EELDVSGTAIRRPTSSIFLMKNLRSLYF--SGCNEPPASASWHLHLPFNLLGKSSCPVAL 207
            E LD+SG +  R  S   +  N+  LY   +   E P++   +LH    L  K  C    
Sbjct: 846  ETLDLSGCSSLR--SFPLISTNIVWLYLENTAIEEIPSTIG-NLHRLVRLEMKK-CTGLE 901

Query: 208  MLPSLTGVCSLTKLDLSDCG----------------LGEAAIPS--DIDNLHSLKELYLN 249
            +LP+   + SL  LDLS C                 L   AI    D+    +LK L LN
Sbjct: 902  VLPTDVNLSSLETLDLSGCSSLRSFPLISESIKWLYLENTAIEEIPDLSKATNLKNLKLN 961

Query: 250  R-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
               + VTLP +I  L  L   E+++C  L+ LP I  N   L  +  +GCSSL T 
Sbjct: 962  NCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLP-IDVNLSSLMILDLSGCSSLRTF 1016



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 4/124 (3%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            LYL+ T+I E+PS+I  L  L  L +K C  L  LP  ++ L  L  L+LSGCS L+ FP
Sbjct: 1026 LYLENTAIEEIPSTIGNLHRLVKLEMKECTGLEVLPTDVN-LSSLMILDLSGCSSLRTFP 1084

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             I   +E    LYL  T+I EVP  IE    L +L +  C+ L  +  +I  L  L+  +
Sbjct: 1085 LISTRIE---CLYLQNTAIEEVPCCIEDFTRLTVLMMYCCQRLKTISPNIFRLTRLELAD 1141

Query: 130  LSGC 133
             + C
Sbjct: 1142 FTDC 1145



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 153/367 (41%), Gaps = 75/367 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S+K+++  Y    ++ E+P  + L   LE L L GCK+L +LP +I +   L  L++S
Sbjct: 612 LGSLKEMNLRY--SNNLKEIPD-LSLAINLEELDLVGCKSLVTLPSSIQNATKLIYLDMS 668

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-------TSIAEVPSSIELLPGLELLYLNECKNLV 113
            C KL+ FP  + ++E L  L L G        +I    S ++   G   + + +C    
Sbjct: 669 DCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNK 727

Query: 114 RLPSSINGL-------------KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
            LP+ ++ L             + L  LN+ G  K E + + +  + SLE +D+S +   
Sbjct: 728 NLPAGLDYLDCLTRCMPCEFRPEQLAFLNVRGY-KHEKLWEGIQSLGSLEGMDLSESENL 786

Query: 161 RPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
                +     L SL  + C      P    + H  +   +     C    +LP+   + 
Sbjct: 787 TEIPDLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRLEM---KECTGLEVLPTDVNLS 843

Query: 217 SLTKLDLSDCG----------------LGEAAI---PSDIDNLHSLKELYLNR-NNFVTL 256
           SL  LDLS C                 L   AI   PS I NLH L  L + +      L
Sbjct: 844 SLETLDLSGCSSLRSFPLISTNIVWLYLENTAIEEIPSTIGNLHRLVRLEMKKCTGLEVL 903

Query: 257 PASISGLLNLEELELEDCKRLQSLP-----------------QIP-----PNLQFVRANG 294
           P  ++ L +LE L+L  C  L+S P                 +IP      NL+ ++ N 
Sbjct: 904 PTDVN-LSSLETLDLSGCSSLRSFPLISESIKWLYLENTAIEEIPDLSKATNLKNLKLNN 962

Query: 295 CSSLVTL 301
           C SLVTL
Sbjct: 963 CKSLVTL 969



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 12/147 (8%)

Query: 652 EEADEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           E   E PD+ +       +L++   +  L   I  L  LV+L +  C  LE LP  ++ L
Sbjct: 784 ENLTEIPDLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDVN-L 842

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
             L TL+LSG S  R FP I+++   ++ ++LE TAI  +P++I  L   +   +K C  
Sbjct: 843 SSLETLDLSGCSSLRSFPLISTN---IVWLYLENTAIEEIPSTIGNLHRLVRLEMKKCTG 899

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKN 791
           L+ LP+ +N L SL  +  SGCS L++
Sbjct: 900 LEVLPTDVN-LSSLETLDLSGCSSLRS 925



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 50/331 (15%)

Query: 3   SMKDLSDL-YLDGTSITEVPSSIELLT-GLELLTLKGCKNLSSLPVTISSLKCLR-TLEL 59
           S K + +L YL+     ++P S+  L   L LL    C  L SLP T  +   +   ++ 
Sbjct: 541 SFKGMRNLQYLEIGYYGDLPQSLVYLPLKLRLLDWDDCP-LKSLPSTFKAEYLVNLIMKY 599

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S   KL +    + S+++++  Y    ++ E+P  + L   LE L L  CK+LV LPSSI
Sbjct: 600 SKLEKLWEGTLPLGSLKEMNLRY--SNNLKEIPD-LSLAINLEELDLVGCKSLVTLPSSI 656

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-------TAIRRPTSSIFLMKNL 172
                L  L++S C KLE+ P  L  +ESLE L+++G        AI+   S +   +  
Sbjct: 657 QNATKLIYLDMSDCKKLESFPTDLN-LESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGR 715

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSC----------PVALMLPSLTG-------- 214
             +    C        W+ +LP   L    C          P  L   ++ G        
Sbjct: 716 NEIVVEDC-------FWNKNLPAG-LDYLDCLTRCMPCEFRPEQLAFLNVRGYKHEKLWE 767

Query: 215 ----VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEEL 269
               + SL  +DLS+       IP D+     L+ L LN   + VTLP++I  L  L  L
Sbjct: 768 GIQSLGSLEGMDLSESE-NLTEIP-DLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRL 825

Query: 270 ELEDCKRLQSLPQIP--PNLQFVRANGCSSL 298
           E+++C  L+ LP      +L+ +  +GCSSL
Sbjct: 826 EMKECTGLEVLPTDVNLSSLETLDLSGCSSL 856



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 20/159 (12%)

Query: 655  DEFPDIVQVLSDGTDIRELSL-----------AIELLFGLVQLTLNGCKNLERLPRTISA 703
            +E PD    LS  T+++ L L            I  L  LV   +  C  LE LP  ++ 
Sbjct: 944  EEIPD----LSKATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLPIDVN- 998

Query: 704  LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
            L  L  L+LSG S  R FP I+++   ++ ++LE TAI  +P++I  L   +   +K+C 
Sbjct: 999  LSSLMILDLSGCSSLRTFPLISTN---IVWLYLENTAIEEIPSTIGNLHRLVKLEMKECT 1055

Query: 764  NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             L+ LP+ +N L SL ++  SGCS L+       ++E L
Sbjct: 1056 GLEVLPTDVN-LSSLMILDLSGCSSLRTFPLISTRIECL 1093



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 4/110 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV L +   K LE+L      L  L  +NL   +  +E P+++ + + L E+ L G  ++
Sbjct: 592 LVNLIMKYSK-LEKLWEGTLPLGSLKEMNLRYSNNLKEIPDLSLAIN-LEELDLVGCKSL 649

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
             LP+SI+  +  I  ++ DCK L+S P+ +N L SL  +  +GC  L+N
Sbjct: 650 VTLPSSIQNATKLIYLDMSDCKKLESFPTDLN-LESLEYLNLTGCPNLRN 698


>gi|57899196|dbj|BAD87306.1| putative blight resistance protein [Oryza sativa Japonica Group]
          Length = 1213

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 127/241 (52%), Gaps = 12/241 (4%)

Query: 11  YLD---GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
           YLD    +++ ++PSS+  L  L  L L GC  L  LP +I++LKCL+ L++SGC  L+K
Sbjct: 664 YLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQK 723

Query: 68  FPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            P    S+  LS + L   S + ++P S+  L  LE L L++C  L +LP  +  L  L+
Sbjct: 724 LPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYRLE 782

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L++S C +++ +P T  +++ L+ L++S     I+ P      +  L+SL  + C++  
Sbjct: 783 VLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLP-ECFGDLSELQSLNLTSCSK-L 840

Query: 185 ASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            S  W L   FNL  L  S C     LPS  G   L  LDL+ C      +P  I N+ S
Sbjct: 841 QSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLRLQVLDLTGC-YNMHGLPDSISNMSS 899

Query: 243 L 243
           L
Sbjct: 900 L 900



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 30/289 (10%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +++++  L L   S+  +P++I  L  L  L L    NL+ LP +++ L  L  L LSGC
Sbjct: 635 TLQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGC 694

Query: 63  SKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           +KL++ P+ + +++ L  L + G  ++ ++P     L  L  + L+ C  L +LP S+N 
Sbjct: 695 AKLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN- 753

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGC 180
           L+SL+ L LS C +LE +P+ LG +  LE LD+S     +     F  +K+L+ L  S C
Sbjct: 754 LESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDC 813

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
           +                         + LP   G +  L  L+L+ C   + ++P  + N
Sbjct: 814 HG-----------------------LIQLPECFGDLSELQSLNLTSCSKLQ-SLPWSLCN 849

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           + +LK L L+   +  +LP+S+ G L L+ L+L  C  +  LP    N+
Sbjct: 850 MFNLKHLNLSYCVSLESLPSSL-GDLRLQVLDLTGCYNMHGLPDSISNM 897



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 28/262 (10%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           LP +I  L  L  L++SG   +   P+   +++++  L L   S+  +P++I  L  L  
Sbjct: 606 LPSSIRRLMLLGYLDVSGFPIIS-LPKSFHTLQNMQSLILSNCSLEILPANIGSLQKLCY 664

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L L+   NL +LPSS+  L  L  LNLSGC KLE +P+++  ++ L+ LD+SG    +  
Sbjct: 665 LDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKL 724

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
              F   +L  L F                  NL   SSC     LP    + SL  L L
Sbjct: 725 PGKF--GSLAKLSF-----------------VNL---SSCSKLTKLPDSLNLESLEHLIL 762

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQ 282
           SDC   E  +P D+ NL+ L+ L ++    V  LP +   L +L+ L L DC  L  LP+
Sbjct: 763 SDCHELE-QLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPE 821

Query: 283 IPPN---LQFVRANGCSSLVTL 301
              +   LQ +    CS L +L
Sbjct: 822 CFGDLSELQSLNLTSCSKLQSL 843



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   + ++P  +  L  LE+L +  C  +  LP T   LK L+ L LS C  L + P+  
Sbjct: 764 DCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECF 823

Query: 73  ASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             + +L  L L   S +  +P S+  +  L+ L L+ C +L  LPSS+  L+ L+ L+L+
Sbjct: 824 GDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLDLT 882

Query: 132 GCCKLENVPDTLGKVESLEELDVS 155
           GC  +  +PD++  + SL  L+ +
Sbjct: 883 GCYNMHGLPDSISNMSSLTLLNTA 906



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L L+   NL +LP +++ L  L  LNLSG +K  E PE  ++   L  + + G  A+
Sbjct: 662 LCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCAL 721

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP     L+     NL  C  L  LP ++N L SL  +  S C +L+ + E LG +  
Sbjct: 722 QKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYR 780

Query: 802 LEV 804
           LEV
Sbjct: 781 LEV 783



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  +++ +L  ++  L  L  L L+GC  LE LP +I+ LK L  L++SG    ++ P 
Sbjct: 667 LSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPG 726

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S  +L  ++L   + +  LP S+ L S   L  L DC  L+ LP  +  L  L ++ 
Sbjct: 727 KFGSLAKLSFVNLSSCSKLTKLPDSLNLESLEHLI-LSDCHELEQLPEDLGNLYRLEVLD 785

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            S C +++ + +T  +++ L+
Sbjct: 786 MSDCYRVQVLPKTFCQLKHLK 806



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 2/141 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LSD  ++ +L   +  L+ L  L ++ C  ++ LP+T   LK+L  LNLS      + P
Sbjct: 761 ILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLP 820

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           E      +L  ++L   + ++ LP S+  +      NL  C +L+SLPS++  LR L+++
Sbjct: 821 ECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVL 879

Query: 782 YPSGCSKLKNVTETLGKVESL 802
             +GC  +  + +++  + SL
Sbjct: 880 DLTGCYNMHGLPDSISNMSSL 900



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 686 LTLNGCKNLER-------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L L+G  N E+       LP +I  L  L  L++SG       P+   +   +  + L  
Sbjct: 588 LDLSGLSNEEQSTPSNPVLPSSIRRLMLLGYLDVSGFPII-SLPKSFHTLQNMQSLILSN 646

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            ++  LPA+I  L      +L    NL  LPS++  L  L  +  SGC+KL+ + E++  
Sbjct: 647 CSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINN 706

Query: 799 VESLE 803
           ++ L+
Sbjct: 707 LKCLQ 711


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 138/280 (49%), Gaps = 18/280 (6%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L    + +VP  I  L  L++L L G   + +LP  I SLK L+ L+L G  K+   P
Sbjct: 55  LSLKNKGLKKVPKEIGKLKKLQMLDL-GLNQIDTLPPCIGSLKFLQILDLWG-DKIAYLP 112

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             + ++  L  LY+D   + ++P SI+ L  L+++ L E   L R+PS I  LKSL+ L+
Sbjct: 113 DTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDL-EGNKLTRIPSEIGALKSLRVLD 171

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEPPASA 187
           L     +  +P  LG +  LE LD+    I++   +I  +++L+ LY      +  P   
Sbjct: 172 LEKNG-ISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDEL 230

Query: 188 S-----WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                  HL++  N L  S          L  + SL  LDLS   L    +P DI  L +
Sbjct: 231 KNMVKLEHLYVSNNRLDSSFAKSRF----LGKLQSLKTLDLSKNKL--VRLPQDIVQLKN 284

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           LK L L+ N    LP S+  + NLEEL+L +  +L  LP+
Sbjct: 285 LKTLILHNNQLQALPDSLGEIENLEELDLRN-NQLTVLPK 323



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 46/272 (16%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL--SGCSKLKK 67
           LY+D   + ++P SI+ LT L+++ L+G K L+ +P  I +LK LR L+L  +G S +  
Sbjct: 124 LYMDYNKLVKLPKSIKKLTQLQVIDLEGNK-LTRIPSEIGALKSLRVLDLEKNGISTI-- 180

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV-RLPSSINGLKSLK 126
            P  + ++  L  L LD   I ++P +I  L  L+ LYL    NL+  LP  +  +  L+
Sbjct: 181 -PSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRN--NLIDSLPDELKNMVKLE 237

Query: 127 TLNLSGCCKLENVPDT-------LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            L +S      N  D+       LGK++SL+ LD+S   + R    I  +KNL++L    
Sbjct: 238 HLYVSN-----NRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHN 292

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            N+  A       LP                SL  + +L +LDL +  L    +P  +  
Sbjct: 293 -NQLQA-------LP---------------DSLGEIENLEELDLRNNQL--TVLPKSVLQ 327

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L  LK+L L  N    LP  I+ + NL+EL+L
Sbjct: 328 LAKLKKLILRNNQLTVLPEEIAQMKNLKELDL 359


>gi|449452168|ref|XP_004143832.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1217

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 144/289 (49%), Gaps = 34/289 (11%)

Query: 27   LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQ--IVASME--DLSKLY 82
            L  L +L L+GCKNL  LP +    K L+ L L  C  L++     + +++E  DL+  +
Sbjct: 753  LDKLIILDLEGCKNLERLPTSHLKFKSLKVLNLRNCLNLEEIIDFSMASNLEILDLNTCF 812

Query: 83   LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
                S+  +  SI  L  L  L L+ C NL +LPSS+  LKSL +L+ + C KLE +P+ 
Sbjct: 813  ----SLRIIHESIGSLDKLITLQLDLCHNLEKLPSSLK-LKSLDSLSFTNCYKLEQLPEF 867

Query: 143  LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASW-----HLHLP 194
               ++SL  ++++GTAIR   SSI  +  L +L  + C      P    W      LHL 
Sbjct: 868  DENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHL- 926

Query: 195  FNLLGKSSCPVALMLPSLTGV--------CSLTKLDLSDCGLGEAAIPSDIDNL-HSLKE 245
                    C    M P  + +          LT LDL +C +  +     + N+  SL++
Sbjct: 927  ------RGCSKLDMFPPRSSLNFSQESSYFKLTVLDLKNCNISNSDFLETLSNVCTSLEK 980

Query: 246  LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
            L L+ N F  LP S+    +L  LEL +CK LQ++ ++P +L  V A+G
Sbjct: 981  LNLSGNTFSCLP-SLQNFKSLRFLELRNCKFLQNIIKLPHHLARVNASG 1028



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 129/280 (46%), Gaps = 18/280 (6%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
           LE L L+GC +L  +  +++SL  L TL+L GC  L+KFP     ++ L  L L     I
Sbjct: 660 LEKLYLRGCTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKI 719

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSI-NGLKSLKTLNLSGCCKLENVPDTLGKVE 147
            E+P  +     L+ LYL EC  L  +  SI   L  L  L+L GC  LE +P +  K +
Sbjct: 720 EEIP-DLSASSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPTSHLKFK 778

Query: 148 SLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC------NEPPASASWHLHLPFNLLGKS 201
           SL+ L++             +  NL  L  + C      +E   S    + L  +L    
Sbjct: 779 SLKVLNLRNCLNLEEIIDFSMASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDL---- 834

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
            C     LPS   + SL  L  ++C   E  +P   +N+ SL+ + LN      LP+SI 
Sbjct: 835 -CHNLEKLPSSLKLKSLDSLSFTNCYKLE-QLPEFDENMKSLRVMNLNGTAIRVLPSSIG 892

Query: 262 GLLNLEELELEDCKRLQSLP---QIPPNLQFVRANGCSSL 298
            L+ LE L L DC  L +LP       +L+ +   GCS L
Sbjct: 893 YLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKL 932



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R +  +I  L  L+ L L+ C NLE+LP ++  LK L +L+ +   K  + PE   +  
Sbjct: 814 LRIIHESIGSLDKLITLQLDLCHNLEKLPSSLK-LKSLDSLSFTNCYKLEQLPEFDENMK 872

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L  ++L GTAIR LP+SI  L G    NL DC NL +LP+ I+ L+SL  ++  GCSKL
Sbjct: 873 SLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKL 932



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 3/129 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ +  ++  L  LV L L GC NLE+ P +   LK L  LNLS   K  E P++++S
Sbjct: 669 TSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSAS 728

Query: 728 RDQLLEIHL-EGTAIRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            + L E++L E   +R +  SI   L   I+ +L+ CKNL+ LP++    +SL+++    
Sbjct: 729 SN-LKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPTSHLKFKSLKVLNLRN 787

Query: 786 CSKLKNVTE 794
           C  L+ + +
Sbjct: 788 CLNLEEIID 796



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 646 NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NC +L E+  EF + ++ L     +GT IR L  +I  L GL  L LN C NL  LP  I
Sbjct: 857 NCYKL-EQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEI 915

Query: 702 SALKYLSTLNLSGLSKFREFP 722
             LK L  L+L G SK   FP
Sbjct: 916 HWLKSLEELHLRGCSKLDMFP 936



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 5/137 (3%)

Query: 683 LVQLTLNGCKNLERLPR-TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TA 740
           LV L + G  N  + PR      K +  ++LS     +E P  +++ + L +++L G T+
Sbjct: 614 LVGLVMKGVVN--KQPRIAFENCKTMKHVDLSYCGTLKETPNFSATLN-LEKLYLRGCTS 670

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           ++ +  S+  LS  +  +L+ C NL+  PS+   L+SL ++  S C K++ + +      
Sbjct: 671 LKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSN 730

Query: 801 SLEVRLSSWNRPKMQND 817
             E+ L   +R ++ +D
Sbjct: 731 LKELYLRECDRLRIIHD 747


>gi|297836030|ref|XP_002885897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331737|gb|EFH62156.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 591

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 146/299 (48%), Gaps = 26/299 (8%)

Query: 28  TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGT 86
           T L+ L L  C  L  LP +I +   + TL+LS C+ L K P  + +  +L +L L + +
Sbjct: 281 TSLKYLILCSCSTLVELPSSIGNAINIGTLDLSECTSLVKLPISIGNATNLERLVLAECS 340

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+ E+PSSI  +  L++L L  C +LV LPSSI  + +L+ L+LS C KL  +P +    
Sbjct: 341 SLMELPSSIGNVINLQILDLGGCSSLVELPSSIGNIINLQKLDLSRCSKLVELPCSFCNA 400

Query: 147 ESLEELDVSGTAIRRPTSS---------IFLMKNLRSLY-----FSGCNEPPASASWHLH 192
            +LEE     T +  P S+         I +++ L SL       +  N   +S    L+
Sbjct: 401 NNLEEYQRCITQVEPPHSNWHATNLQEWILIVEKLSSLTENDFCLNMSNSYSSSPGDLLY 460

Query: 193 -----LPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                +   +L  S C   + LP SL    +L  L L  C      +PS I N + L+EL
Sbjct: 461 AIGSAVCLKILDLSECSSLVKLPSSLRNAINLQVLRLQRCS-SLVELPSSIGNAYFLQEL 519

Query: 247 YLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
            L    + V LP SI  ++NLE+L L  C  L  LP    N   L+ ++   CSSLV L
Sbjct: 520 NLGGCLSLVELPTSIGNIINLEKLNLGGCSSLVELPSSIGNIIDLKKLKFANCSSLVEL 578



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 98/304 (32%), Positives = 143/304 (47%), Gaps = 35/304 (11%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DG 85
           L  L+ + L    NL  L   +S+   L+ L L  CS L + P  + +  ++  L L + 
Sbjct: 257 LKNLKFMNLSFSTNLKELH-DLSTATSLKYLILCSCSTLVELPSSIGNAINIGTLDLSEC 315

Query: 86  TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
           TS+ ++P SI     LE L L EC +L+ LPSSI  + +L+ L+L GC  L  +P ++G 
Sbjct: 316 TSLVKLPISIGNATNLERLVLAECSSLMELPSSIGNVINLQILDLGGCSSLVELPSSIGN 375

Query: 146 VESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHL---------- 191
           + +L++LD+S  +  +  P S  F   N    Y       EPP S +WH           
Sbjct: 376 IINLQKLDLSRCSKLVELPCS--FCNANNLEEYQRCITQVEPPHS-NWHATNLQEWILIV 432

Query: 192 ---------HLPFNLLGK-SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
                        N+    SS P  L+    + VC L  LDLS+C      +PS + N  
Sbjct: 433 EKLSSLTENDFCLNMSNSYSSSPGDLLYAIGSAVC-LKILDLSECS-SLVKLPSSLRNAI 490

Query: 242 SLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP---NLQFVRANGCSS 297
           +L+ L L R ++ V LP+SI     L+EL L  C  L  LP       NL+ +   GCSS
Sbjct: 491 NLQVLRLQRCSSLVELPSSIGNAYFLQELNLGGCLSLVELPTSIGNIINLEKLNLGGCSS 550

Query: 298 LVTL 301
           LV L
Sbjct: 551 LVEL 554



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 1/116 (0%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SI 88
           L++L L  C +L  LP ++ +   L+ L L  CS L + P  + +   L +L L G  S+
Sbjct: 468 LKILDLSECSSLVKLPSSLRNAINLQVLRLQRCSSLVELPSSIGNAYFLQELNLGGCLSL 527

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLG 144
            E+P+SI  +  LE L L  C +LV LPSSI  +  LK L  + C  L  +P ++G
Sbjct: 528 VELPTSIGNIINLEKLNLGGCSSLVELPSSIGNIIDLKKLKFANCSSLVELPSSIG 583



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L L+ C +L +LP ++     L  L L   S   E P    +   L E++L G  ++  L
Sbjct: 471 LDLSECSSLVKLPSSLRNAINLQVLRLQRCSSLVELPSSIGNAYFLQELNLGGCLSLVEL 530

Query: 745 PASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           P SI    GNI++    NL  C +L  LPS+I  +  L+ +  + CS L  +  ++G
Sbjct: 531 PTSI----GNIINLEKLNLGGCSSLVELPSSIGNIIDLKKLKFANCSSLVELPSSIG 583



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 7   LSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L +L L G  S+ E+P+SI  +  LE L L GC +L  LP +I ++  L+ L+ + CS L
Sbjct: 516 LQELNLGGCLSLVELPTSIGNIINLEKLNLGGCSSLVELPSSIGNIIDLKKLKFANCSSL 575

Query: 66  KKFPQIVAS 74
            + P  + +
Sbjct: 576 VELPSSIGN 584



 Score = 39.3 bits (90), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 23/170 (13%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           ++ +LS A  L +    L L  C  L  LP +I     + TL+LS  +   + P    + 
Sbjct: 273 ELHDLSTATSLKY----LILCSCSTLVELPSSIGNAINIGTLDLSECTSLVKLPISIGNA 328

Query: 729 DQLLEIHL-EGTAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYP 783
             L  + L E +++  LP+SI    GN+++    +L  C +L  LPS+I  + +L+ +  
Sbjct: 329 TNLERLVLAECSSLMELPSSI----GNVINLQILDLGGCSSLVELPSSIGNIINLQKLDL 384

Query: 784 SGCSKL----------KNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQ 823
           S CSKL           N+ E    +  +E   S+W+   +Q     VE+
Sbjct: 385 SRCSKLVELPCSFCNANNLEEYQRCITQVEPPHSNWHATNLQEWILIVEK 434


>gi|357515077|ref|XP_003627827.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355521849|gb|AET02303.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1266

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 205/511 (40%), Gaps = 117/511 (22%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            +  V +SI  L  L  L L  CKNL SL ++ + L  LR LEL GCS LK+F     + E
Sbjct: 666  LRHVHASILSLQKLVNLNLVWCKNLKSL-LSNTPLNSLRILELYGCSSLKEFS---VTSE 721

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            +++ L L  T+I E                        LP S+  L  L  L LS C +L
Sbjct: 722  EMTYLDLRCTAINE------------------------LPPSVKYLGRLMNLELSSCVRL 757

Query: 137  ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
             N+P+    ++SL  L +S   +   ++   L   LRSL +                   
Sbjct: 758  RNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGY------------------- 798

Query: 197  LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
                           L   C+LT+L            P +I  L SL  L L+ +N   +
Sbjct: 799  -------------LCLDNCCNLTEL------------PHNISLLSSLYYLSLSGSNVKNI 833

Query: 257  PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA------LKLCRS 310
            P SI  L  LE L+L  C  +Q LP++PP+++ +    C+SL T+F        L+  + 
Sbjct: 834  PKSIKHLSQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKV 893

Query: 311  KYTIINCIDSLKLLRKNGLAISM---LRE-------------------YLELQAVSDPGH 348
              +  NC++ L    +NG+ +     L+E                   + + +A S   H
Sbjct: 894  FISFKNCVE-LNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHH 952

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF--QVPKHSTGTYL 406
              +++ PGS++P WF Y++  +SIT+         + + GF  C +    +P      + 
Sbjct: 953  PPTVICPGSRVPDWFHYRSTEASITIELSVSHSPQSNIFGFIFCLILPQSLPNEKNLNWK 1012

Query: 407  FHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFR 466
                     EC M+G               +VSDH++L +      N+ F+        R
Sbjct: 1013 IGC------ECYMEGGENIRNTSMCSFATGLVSDHVYLWY----DENFCFDMFNTTGKSR 1062

Query: 467  SISDPTWK----VKRCGFHPIYMHEVEEFDE 493
            +  D + K    +K CG   IY  E   F E
Sbjct: 1063 TNDDYSDKMNVVIKECGICQIYGSEYLSFVE 1093



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS    +R +  +I  L  LV L L  CKNL+ L    + L  L  L L G S  +EF  
Sbjct: 660 LSRCVRLRHVHASILSLQKLVNLNLVWCKNLKSLLSN-TPLNSLRILELYGCSSLKEFS- 717

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +TS  +++  + L  TAI  LP S++ L   +   L  C  L++LP+  + L+SL  +  
Sbjct: 718 VTS--EEMTYLDLRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVL 775

Query: 784 SGCSKL 789
           S C+ L
Sbjct: 776 SDCTLL 781



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 66/245 (26%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQ----------VLSDGTDIRELSLAIE 678
           ++ GR+ VR++S ++PG  SRL++  +E  D+++          +  D + I++++L+ +
Sbjct: 493 QEMGREIVRQESTKDPGRRSRLYDH-EEVYDVLKNNMGTSAIEGISLDVSQIKDMNLSSD 551

Query: 679 LLFGLVQLTL----------------NGCKN--------------LERLPRTISA----- 703
           +   ++ L                   G K+              L+ LP + S      
Sbjct: 552 IFVKMINLRFLKFYSRSGERCSVSLPAGLKSFSNKLRYLHWSAYPLKSLPSSFSPEKLVE 611

Query: 704 -----------------LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLP 745
                            L  L  ++LS      E P+ + + + L  ++L     +R + 
Sbjct: 612 LYMPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELPDFSMASN-LQTVNLSRCVRLRHVH 670

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
           ASI  L   +  NL  CKNLKSL S    L SLR++   GCS LK  + T  ++  L++R
Sbjct: 671 ASILSLQKLVNLNLVWCKNLKSLLSN-TPLNSLRILELYGCSSLKEFSVTSEEMTYLDLR 729

Query: 806 LSSWN 810
            ++ N
Sbjct: 730 CTAIN 734


>gi|15242354|ref|NP_199338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5459305|emb|CAB50708.1| disease resistance protein RPS4 [Arabidopsis thaliana]
 gi|10176996|dbj|BAB10246.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007838|gb|AED95221.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 169/382 (44%), Gaps = 80/382 (20%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            L+ L L+GC  L + P  +  +K L  L L GC+ L+  P++  ++  L  L L G ++ 
Sbjct: 685  LQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTF 742

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             E P    +   +E LYL+    + +LP ++  L+ L  LN+  C  LE +P  +G++++
Sbjct: 743  KEFPL---ISDNIETLYLDGTA-ISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKA 798

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L+EL +S               NL+         P    S+   L   LL  ++  V   
Sbjct: 799  LQELILSDCL------------NLKIF-------PEIDISF---LNILLLDGTAIEVMPQ 836

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
            LPS+  +C                               L+RN  ++ LP  IS L  L+
Sbjct: 837  LPSVQYLC-------------------------------LSRNAKISCLPVGISQLSQLK 865

Query: 268  ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINCIDSL 321
             L+L+ C  L S+P+ PPNLQ + A+GCSSL T+   L          S +   NC ++L
Sbjct: 866  WLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC-ENL 924

Query: 322  KLLRKNGLA---------ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSI 372
            +   K  +          +S  R+      VS+     S  FPG ++P WF ++  GS +
Sbjct: 925  EQAAKEEITSYAQRKCQLLSYARKRYNGGLVSES--LFSTCFPGCEVPSWFCHETVGSEL 982

Query: 373  TVTRPSYLYNVNKVVGFAICCV 394
             V    + ++  K+ G A+C V
Sbjct: 983  EVKLLPHWHD-KKLAGIALCAV 1003



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 8/160 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  + L  L L+G T++   P  ++ +  L  L LKGC +L SLP    +L  L+TL L
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTL 736

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS  K+FP I  ++E    LYLDGT+I+++P ++E L  L +L + +CK L  +P  +
Sbjct: 737 SGCSTFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRV 793

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             LK+L+ L LS C  L+  P+    +  L  L + GTAI
Sbjct: 794 GELKALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI 831



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 8/184 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  LYLDGT+I+++P ++E L  L +L +K CK L  +P  +  LK L+ L LS C  L
Sbjct: 751 NIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNL 810

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K FP+I  S   L+ L LDGT+I  +P     LP ++ L L+    +  LP  I+ L  L
Sbjct: 811 KIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIF-LMKNLRSLYFSGCNEP 183
           K L+L  C  L +VP+    ++ L+    S    + +P + I    +N  +  F+ C   
Sbjct: 865 KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENL 924

Query: 184 PASA 187
             +A
Sbjct: 925 EQAA 928



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 5/108 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L GC +LE LP     L  L TL LSG S F+EFP I+   D +  ++L+GTAI 
Sbjct: 709 LAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLIS---DNIETLYLDGTAIS 763

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            LP ++E L   ++ N+KDCK L+ +P  +  L++L+ +  S C  LK
Sbjct: 764 QLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 27/200 (13%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP    +I  +  DGT I +L + +E L  LV L +  CK LE +P  +  LK L  L 
Sbjct: 744 EFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELI 803

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP-------------ASIELLSGNI--L 756
           LS     + FPEI  S   +L   L+GTAI  +P             A I  L   I  L
Sbjct: 804 LSDCLNLKIFPEIDISFLNIL--LLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQL 861

Query: 757 SNLK--DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKM 814
           S LK  D K   SL S      +L+ +   GCS LK V++ L ++   E   S++     
Sbjct: 862 SQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC 921

Query: 815 QNDFDCVEQSAVETVTKLAK 834
           +N    +EQ+A E +T  A+
Sbjct: 922 EN----LEQAAKEEITSYAQ 937


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 136/292 (46%), Gaps = 15/292 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L    +T +P  IE L  L+ L L   + L++LP  I  L+ L+ L L 
Sbjct: 144 IGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNR-LANLPEEIGKLQNLQKLNL- 201

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ +  ++ L +LYL    +  +P  IE L  L  LYL E   L  L   I 
Sbjct: 202 GVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYL-EGNQLTTLSKEIG 260

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L G  +L  +P  +GK++ L+ L + G+ +      I  ++NLR LY    
Sbjct: 261 KLQNLRDLYLGGN-QLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENN 319

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                            L  SS  +  +   +  +  L +LDLS   L    +P +I  L
Sbjct: 320 QLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKL--TTLPKEIGKL 377

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL---------EDCKRLQSLPQI 283
             L+ LYL+ N   TLP  I  L +LE L L         E+  +LQ L Q+
Sbjct: 378 QKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGKLQKLQQL 429



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 22/331 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L DL L    +  +P  I  L  L+ L L   + L++LP  I  L+ L+ L L 
Sbjct: 75  IGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNR-LANLPEEIGKLQNLQELHLE 133

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L +L L    +  +P  IE L  L+ L+L   + L  LP  I 
Sbjct: 134 N-NQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNR-LANLPEEIG 191

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ LNL G  +L  +P  + K++ L++L +    +      I  ++NLR LY  G 
Sbjct: 192 KLQNLQKLNL-GVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGN 250

Query: 181 NEPPASASWHLHLPFNL----LGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPS 235
                + S  +    NL    LG +       LP   G +  L  L L    L    +P 
Sbjct: 251 Q--LTTLSKEIGKLQNLRDLYLGGNQLTT---LPKEIGKLQKLQTLHLEGSQL--TTLPK 303

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR---- 291
            I+ L +L++LYL  N   TLP  I  L NL+EL L   K L +LP+    LQ ++    
Sbjct: 304 GIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNK-LTTLPEEIEKLQKLQRLDL 362

Query: 292 -ANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
             N  ++L    G L+  R  Y   N + +L
Sbjct: 363 SKNKLTTLPKEIGKLQKLRGLYLDHNQLKTL 393



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 4/179 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L DLYL G  +T +P  I  L  L+ L L+G + L++LP  I  L+ LR L L 
Sbjct: 259 IGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQ-LTTLPKGIEKLQNLRDLYLE 317

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L +LYL    +  +P  IE L  L+ L L++ K L  LP  I 
Sbjct: 318 N-NQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNK-LTTLPKEIG 375

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            L+ L+ L L    +L+ +P+ +G ++SLE L++ G ++      I  ++ L+ LY  G
Sbjct: 376 KLQKLRGLYLD-HNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGKLQKLQQLYLGG 433



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 51/230 (22%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           +LP  I  L+ LR L+LS  ++L   P+ +  ++ L KL L    +A +P  I  L  L+
Sbjct: 70  TLPKEIGKLQNLRDLDLS-SNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQ 128

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
            L+L E   L  LP  I  L++L+ LNL G  +L  +P  + K++ L+EL +    +   
Sbjct: 129 ELHL-ENNQLTTLPEEIGKLQNLQELNL-GFNQLTALPKGIEKLQKLQELHLYSNRLANL 186

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              I  ++NL+ L                                      GV  LT   
Sbjct: 187 PEEIGKLQNLQKLNL------------------------------------GVNQLT--- 207

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
                    A+P  I+ L  L++LYL  N    LP  I  L NL +L LE
Sbjct: 208 ---------ALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLE 248



 Score = 43.1 bits (100), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 24/196 (12%)

Query: 139 VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPASASWH----L 191
           +P  +GK+++L +LD+S   +      I  ++ L+ L  +     N P           L
Sbjct: 71  LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQEL 130

Query: 192 HLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
           HL  N L          LP   G + +L +L+L    L   A+P  I+ L  L+EL+L  
Sbjct: 131 HLENNQLT--------TLPEEIGKLQNLQELNLGFNQL--TALPKGIEKLQKLQELHLYS 180

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGAL 305
           N    LP  I  L NL++L L    +L +LP+    LQ     ++ +N  ++L      L
Sbjct: 181 NRLANLPEEIGKLQNLQKLNL-GVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKL 239

Query: 306 KLCRSKYTIINCIDSL 321
           +  R  Y   N + +L
Sbjct: 240 QNLRDLYLEGNQLTTL 255



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 11/111 (9%)

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           LP+ I  L+ L  LNL+  ++    PE       L E+HLE   +  LP  I       L
Sbjct: 94  LPKEIGKLQKLQKLNLTR-NRLANLPEEIGKLQNLQELHLENNQLTTLPEEI-----GKL 147

Query: 757 SNLKDC----KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            NL++       L +LP  I  L+ L+ ++    ++L N+ E +GK+++L+
Sbjct: 148 QNLQELNLGFNQLTALPKGIEKLQKLQELHLY-SNRLANLPEEIGKLQNLQ 197



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 12/131 (9%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           IE L  L  L L G + L  L + I  L+ L  L L G ++    P+      +L  +HL
Sbjct: 236 IEKLQNLRDLYLEGNQ-LTTLSKEIGKLQNLRDLYLGG-NQLTTLPKEIGKLQKLQTLHL 293

Query: 737 EGTAIRGLPASIELLSGNILSNLKDC----KNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           EG+ +  LP  IE      L NL+D       L +LP  I  L++L+ +Y S  +KL  +
Sbjct: 294 EGSQLTTLPKGIE-----KLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLS-SNKLTTL 347

Query: 793 TETLGKVESLE 803
            E + K++ L+
Sbjct: 348 PEEIEKLQKLQ 358


>gi|296089460|emb|CBI39279.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/118 (51%), Positives = 80/118 (67%), Gaps = 1/118 (0%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++  +P++I  LT L  L L+ C+NL SLP TI  LK L+TL L  CS ++ FP+I+  M
Sbjct: 43  NLRSLPNTIGHLTRLSTLNLEECRNLRSLPNTICGLKSLKTLGLDSCSSVEAFPEIMEDM 102

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-LPSSINGLKSLKTLNLSG 132
           E L +L L GT I+E+PSSIE L GL  L LN+C+ LVR +PS +  L SLK LNLSG
Sbjct: 103 EHLEELNLCGTDISELPSSIEHLRGLWHLQLNKCEKLVREIPSDLWCLSSLKFLNLSG 160



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 119/289 (41%), Gaps = 93/289 (32%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           LDG +I  +P SI  LT L+ L LK C+NL S                            
Sbjct: 15  LDGVAIKGLPCSISHLTQLDYLCLKNCRNLRS---------------------------- 46

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
                              +P++I  L  L  L L EC+NL  LP++I GLKSLKTL L 
Sbjct: 47  -------------------LPNTIGHLTRLSTLNLEECRNLRSLPNTICGLKSLKTLGLD 87

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            C  +E  P+ +  +E LEEL++ GT I    SSI   ++LR L             WHL
Sbjct: 88  SCSSVEAFPEIMEDMEHLEELNLCGTDISELPSSI---EHLRGL-------------WHL 131

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                                          L+ C      IPSD+  L SLK L L+ N
Sbjct: 132 Q------------------------------LNKCEKLVREIPSDLWCLSSLKFLNLSGN 161

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
           +   +P  I  L  L  L +  C  L+ + ++P +L ++RA+GC  L T
Sbjct: 162 HIRCVPVGIIQLSRLFTLFVNHCPMLEEIGELPSSLGWIRAHGCPCLET 210



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L +  ++R L   I  L  L  L L  C+NL  LP TI  LK L TL L   S    FPE
Sbjct: 38  LKNCRNLRSLPNTIGHLTRLSTLNLEECRNLRSLPNTICGLKSLKTLGLDSCSSVEAFPE 97

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL-KSLPSTINGLRSLRMMY 782
           I    + L E++L GT I  LP+SIE L G     L  C+ L + +PS +  L SL+ + 
Sbjct: 98  IMEDMEHLEELNLCGTDISELPSSIEHLRGLWHLQLNKCEKLVREIPSDLWCLSSLKFLN 157

Query: 783 PSG 785
            SG
Sbjct: 158 LSG 160



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 10/127 (7%)

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L+G AI+GLP SI  L+      LK+C+NL+SLP+TI  L  L  +    C  L+++  T
Sbjct: 15  LDGVAIKGLPCSISHLTQLDYLCLKNCRNLRSLPNTIGHLTRLSTLNLEECRNLRSLPNT 74

Query: 796 LGKVESLE-VRLSSWNR----PKMQNDFDCVEQSAV--ETVTKLAKA-ELLRDSDSWKKN 847
           +  ++SL+ + L S +     P++  D + +E+  +    +++L  + E LR    W   
Sbjct: 75  ICGLKSLKTLGLDSCSSVEAFPEIMEDMEHLEELNLCGTDISELPSSIEHLR--GLWHLQ 132

Query: 848 VDKCMKL 854
           ++KC KL
Sbjct: 133 LNKCEKL 139



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNL-SSLPVTISSLKCLRTLEL 59
           M  M+ L +L L GT I+E+PSSIE L GL  L L  C+ L   +P  +  L  L+ L L
Sbjct: 99  MEDMEHLEELNLCGTDISELPSSIEHLRGLWHLQLNKCEKLVREIPSDLWCLSSLKFLNL 158

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT----SIAEVPSSI 95
           SG + ++  P  +  +  L  L+++       I E+PSS+
Sbjct: 159 SG-NHIRCVPVGIIQLSRLFTLFVNHCPMLEEIGELPSSL 197


>gi|5823587|emb|CAB53785.1| disease resistance protein RPS4-Ler [Arabidopsis thaliana]
          Length = 1217

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 169/383 (44%), Gaps = 80/383 (20%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            L+ L L+GC  L + P  +  +K L  L L GC+ L+  P++  ++  L  L L G ++ 
Sbjct: 685  LQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTF 742

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             E P    +   +E LYL+    + +LP ++  L+ L  LN+  C  LE +P  +G++++
Sbjct: 743  KEFPL---ISDNIETLYLDGTA-ISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKA 798

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L+EL +S               NL+         P    S+   L   LL  ++  V   
Sbjct: 799  LQELILSDCL------------NLKIF-------PEIDISF---LNILLLDGTAIEVMPQ 836

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
            LPS+  +C                               L+RN  ++ LP  IS L  L+
Sbjct: 837  LPSVQYLC-------------------------------LSRNAKISCLPVGISQLSQLK 865

Query: 268  ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINCIDSL 321
             L+L+ C  L S+P+ PPNLQ + A+GCSSL T+   L          S +   NC ++L
Sbjct: 866  WLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC-ENL 924

Query: 322  KLLRKNGLA---------ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSI 372
            +   K  +          +S  R+      VS+     S  FPG ++P WF ++  GS +
Sbjct: 925  EQAAKEEITSYAQRKCQLLSYARKRYNGGLVSES--LFSTCFPGCEVPSWFCHETVGSEL 982

Query: 373  TVTRPSYLYNVNKVVGFAICCVF 395
             V    + ++  K+ G A+C V 
Sbjct: 983  EVKLLPHWHD-KKLAGIALCAVI 1004



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 8/160 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  + L  L L+G T++   P  ++ +  L  L LKGC +L SLP    +L  L+TL L
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTL 736

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS  K+FP I  ++E    LYLDGT+I+++P ++E L  L +L + +CK L  +P  +
Sbjct: 737 SGCSTFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRV 793

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             LK+L+ L LS C  L+  P+    +  L  L + GTAI
Sbjct: 794 GELKALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI 831



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 8/184 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  LYLDGT+I+++P ++E L  L +L +K CK L  +P  +  LK L+ L LS C  L
Sbjct: 751 NIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNL 810

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K FP+I  S   L+ L LDGT+I  +P     LP ++ L L+    +  LP  I+ L  L
Sbjct: 811 KIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIF-LMKNLRSLYFSGCNEP 183
           K L+L  C  L +VP+    ++ L+    S    + +P + I    +N  +  F+ C   
Sbjct: 865 KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENL 924

Query: 184 PASA 187
             +A
Sbjct: 925 EQAA 928



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 5/108 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L GC +LE LP     L  L TL LSG S F+EFP I+   D +  ++L+GTAI 
Sbjct: 709 LAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLIS---DNIETLYLDGTAIS 763

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            LP ++E L   ++ N+KDCK L+ +P  +  L++L+ +  S C  LK
Sbjct: 764 QLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 27/200 (13%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP    +I  +  DGT I +L + +E L  LV L +  CK LE +P  +  LK L  L 
Sbjct: 744 EFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELI 803

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP-------------ASIELLSGNI--L 756
           LS     + FPEI  S   +L   L+GTAI  +P             A I  L   I  L
Sbjct: 804 LSDCLNLKIFPEIDISFLNIL--LLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQL 861

Query: 757 SNLK--DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKM 814
           S LK  D K   SL S      +L+ +   GCS LK V++ L ++   E   S++     
Sbjct: 862 SQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC 921

Query: 815 QNDFDCVEQSAVETVTKLAK 834
           +N    +EQ+A E +T  A+
Sbjct: 922 EN----LEQAAKEEITSYAQ 937


>gi|237769815|dbj|BAH59426.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1217

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 169/382 (44%), Gaps = 80/382 (20%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
            L+ L L+GC  L + P  +  +K L  L L GC+ L+  P++  ++  L  L L G ++ 
Sbjct: 685  LQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTF 742

Query: 89   AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
             E P    +   +E LYL+    + +LP ++  L+ L  LN+  C  LE +P  +G++++
Sbjct: 743  KEFPL---ISDNIETLYLDGTA-ISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKA 798

Query: 149  LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
            L+EL +S               NL+         P    S+   L   LL  ++  V   
Sbjct: 799  LQELILSDCL------------NLKIF-------PEIDISF---LNILLLDGTAIEVMPQ 836

Query: 209  LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
            LPS+  +C                               L+RN  ++ LP  IS L  L+
Sbjct: 837  LPSVQYLC-------------------------------LSRNAKISCLPVGISQLSQLK 865

Query: 268  ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC------RSKYTIINCIDSL 321
             L+L+ C  L S+P+ PPNLQ + A+GCSSL T+   L          S +   NC ++L
Sbjct: 866  WLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC-ENL 924

Query: 322  KLLRKNGLA---------ISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSI 372
            +   K  +          +S  R+      VS+     S  FPG ++P WF ++  GS +
Sbjct: 925  EQAAKEEITSYAQRKCQLLSYARKRYNGGLVSES--LFSTCFPGCEVPSWFCHETVGSEL 982

Query: 373  TVTRPSYLYNVNKVVGFAICCV 394
             V    + ++  K+ G A+C V
Sbjct: 983  EVKLLPHWHD-KKLAGIALCAV 1003



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 93/160 (58%), Gaps = 8/160 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  + L  L L+G T++   P  ++ +  L  L LKGC +L SLP    +L  L+TL L
Sbjct: 679 LSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTL 736

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS  K+FP I  ++E    LYLDGT+I+++P ++E L  L +L + +CK L  +P  +
Sbjct: 737 SGCSTFKEFPLISDNIE---TLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRV 793

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             LK+L+ L LS C  L+  P+    +  L  L + GTAI
Sbjct: 794 GELKALQELILSDCLNLKIFPEI--DISFLNILLLDGTAI 831



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 8/184 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  LYLDGT+I+++P ++E L  L +L +K CK L  +P  +  LK L+ L LS C  L
Sbjct: 751 NIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNL 810

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K FP+I  S   L+ L LDGT+I  +P     LP ++ L L+    +  LP  I+ L  L
Sbjct: 811 KIFPEIDISF--LNILLLDGTAIEVMPQ----LPSVQYLCLSRNAKISCLPVGISQLSQL 864

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIF-LMKNLRSLYFSGCNEP 183
           K L+L  C  L +VP+    ++ L+    S    + +P + I    +N  +  F+ C   
Sbjct: 865 KWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNCENL 924

Query: 184 PASA 187
             +A
Sbjct: 925 EQAA 928



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 5/108 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L GC +LE LP     L  L TL LSG S F+EFP I+   D +  ++L+GTAI 
Sbjct: 709 LAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLIS---DNIETLYLDGTAIS 763

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
            LP ++E L   ++ N+KDCK L+ +P  +  L++L+ +  S C  LK
Sbjct: 764 QLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 811



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 27/200 (13%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP    +I  +  DGT I +L + +E L  LV L +  CK LE +P  +  LK L  L 
Sbjct: 744 EFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELI 803

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP-------------ASIELLSGNI--L 756
           LS     + FPEI  S   +L   L+GTAI  +P             A I  L   I  L
Sbjct: 804 LSDCLNLKIFPEIDISFLNIL--LLDGTAIEVMPQLPSVQYLCLSRNAKISCLPVGISQL 861

Query: 757 SNLK--DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKM 814
           S LK  D K   SL S      +L+ +   GCS LK V++ L ++   E   S++     
Sbjct: 862 SQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPLARIMPTEQNHSTFIFTNC 921

Query: 815 QNDFDCVEQSAVETVTKLAK 834
           +N    +EQ+A E +T  A+
Sbjct: 922 EN----LEQAAKEEITSYAQ 937


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 29/269 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 66  IGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPNEIEQLKNLQVLDL- 123

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +P+ IE L  L++L L     L  LP  I 
Sbjct: 124 GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLG-SNQLTVLPQEIE 182

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+ L L    +L  +P+ + ++++L+ LD+    +      I  +KNL+ LY    
Sbjct: 183 QLKNLQLLYLRSN-RLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLY---- 237

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                     LH         S  +  +   +  + +L  LDLS+  L    +P++I+ L
Sbjct: 238 ----------LH---------SNRLTTLSKDIEQLQNLKSLDLSNNQL--TTLPNEIEQL 276

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEEL 269
            +LK LYL+ N F T P  I  L NL+ L
Sbjct: 277 KNLKSLYLSENQFATFPKEIGQLQNLKVL 305



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 22/274 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 158 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPNEIEQLKNLQVLDL- 215

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 216 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 274

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 275 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 333

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
                P           L L +N L         +LP   G + +L  LDL +  L    
Sbjct: 334 QLITLPKEIEQLKNLKSLDLSYNQLT--------ILPKEVGQLENLQTLDLRNNQL--KT 383

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
           +P +I+ L +L+ L+L+ N   TLP  I  L NL
Sbjct: 384 LPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNL 417



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 52/273 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +   IE L  L+ L L   + L++LP  I  LK L++L LS
Sbjct: 227 IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIEQLKNLKSLYLS 285

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++   FP+ +  +++L  L+L+   I  +P+ I  L  L+ LYL++ + L+ LP  I 
Sbjct: 286 E-NQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ-LITLPKEIE 343

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L+LS   +L  +P  +G++E+L+ LD+    ++     I  +KNL++L+ S  
Sbjct: 344 QLKNLKSLDLS-YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 402

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                                LT             +P +I  L
Sbjct: 403 ------------------------------------QLT------------TLPQEIGQL 414

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +L  L L  N   TLP  I  L NL+ L L +
Sbjct: 415 QNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 447



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 8/228 (3%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 50  RVLDLSR-QELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 107

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP+ I  LK+L+ L+L G  +L  +P  + ++++L+ L +    +    + I  +KNL+ 
Sbjct: 108 LPNEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQV 166

Query: 175 LYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           L   G N+          L    LL   S  +  +   +  + +L  LDL    L    +
Sbjct: 167 LDL-GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQL--TVL 223

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           P +I+ L +L+ LYL+ N   TL   I  L NL+ L+L +  +L +LP
Sbjct: 224 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN-NQLTTLP 270


>gi|357513659|ref|XP_003627118.1| Disease resistance protein [Medicago truncatula]
 gi|355521140|gb|AET01594.1| Disease resistance protein [Medicago truncatula]
          Length = 913

 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 177/411 (43%), Gaps = 52/411 (12%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +++L  ++I  +   ++ L  LE + L+  K L  LP  +S  + L+ L LSGC  L 
Sbjct: 527 LVEIHLPRSNIKYLWHGMQKLVHLEKVDLRESKQLMKLP-DLSGAEKLKWLYLSGCESLH 585

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
           +    V S + L  L LDG                       CK L  L S  N L SL+
Sbjct: 586 EVQPSVFSKDTLVTLLLDG-----------------------CKKLEILVSE-NHLTSLQ 621

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEP 183
            +++SGC  L     +    +S+EELD+S T I    SSI  M  L  L   G    N P
Sbjct: 622 KIDVSGCSSLREFSLS---SDSIEELDLSNTGIEILHSSIGRMSMLWRLDLQGLRLKNLP 678

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
              +S       +L   +    + +     G+ SL  L L DCG     +P +ID+L  L
Sbjct: 679 KEMSSMRSLTEIDLSNCNVVTKSKLEALFGGLESLIILYLKDCG-NLLELPVNIDSLSLL 737

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFG 303
            EL L+ +N   LP S   L  L  L L++CK+L  L ++PP+++ +  N C SLV +  
Sbjct: 738 YELRLDGSNVKMLPTSFKNLSRLRILYLDNCKKLGCLSEVPPHIEELHVNNCISLVKVSS 797

Query: 304 ALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF--------- 354
              L  S       I     ++ +  +++ + E + L   S   H   IV+         
Sbjct: 798 LKALSHSMKGWKKEISFKNTIKLDAPSLNRITEDVILTMKSAAFHNTIIVYDVHGWSYNG 857

Query: 355 -----PGSQIPKWFMYQNEG--SSITVTRPSYLYNVNKVVGFAICCVFQVP 398
                PG  +P  F ++  G  SSIT+  P     ++K VGF    V   P
Sbjct: 858 VHFWLPGCTVPSQFKFRAIGSSSSITIKIPP----LSKDVGFIYSVVVLHP 904



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 27/248 (10%)

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTII 315
           LP S   L  L  L L++CK+L  L ++PP+++ +  N C SLV +     L  S     
Sbjct: 2   LPTSFKNLSRLRILYLDNCKKLGCLSEVPPHIEELHVNNCISLVKVSSLKALSHSMKGWK 61

Query: 316 NCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF--------------PGSQIPK 361
             I     ++ +  +++ + E + L   S   H   IV+              PG  +P 
Sbjct: 62  KEISFKNTIKLDAPSLNRITEDVILTMKSAAFHNTIIVYDLHGWSYNGVHFWLPGCTVPS 121

Query: 362 WFMYQNEG--SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
            F ++  G  SSIT+  P    +V  +    +   FQ+ +H     +   Y +       
Sbjct: 122 QFKFRAIGSSSSITIKIPPLSKDVGFIYSVVVSPSFQMEEHGNNLEIRFKYYSE------ 175

Query: 420 DGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCG 479
             SG+ ++I        V  DH+++ +   H     FE ++  LS     + ++ +K CG
Sbjct: 176 --SGDLNFINSHS-IKDVSLDHVFMCYNEPHFIGNAFEFSVTNLS--GDLNGSYILKECG 230

Query: 480 FHPIYMHE 487
            +PIY  E
Sbjct: 231 IYPIYYSE 238



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 14/124 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLE---LLTLKGCKNLSSLPVTISSLKCLRTL 57
           M+SM+ L+++ L   ++        L  GLE   +L LK C NL  LPV I SL  L  L
Sbjct: 681 MSSMRSLTEIDLSNCNVVTKSKLEALFGGLESLIILYLKDCGNLLELPVNIDSLSLLYEL 740

Query: 58  ELSGCSKLKKFPQIVASMEDLSKLYLDGTS----IAEVPSSIELLPGLELLYLNECKNLV 113
            L G S +K  P    ++  L  LYLD       ++EVP      P +E L++N C +LV
Sbjct: 741 RLDG-SNVKMLPTSFKNLSRLRILYLDNCKKLGCLSEVP------PHIEELHVNNCISLV 793

Query: 114 RLPS 117
           ++ S
Sbjct: 794 KVSS 797



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 7/162 (4%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS L E +     I ++    T I  L  +I  +  L +L L G + L+ LP+ +S+++ 
Sbjct: 628 CSSLREFSLSSDSIEELDLSNTGIEILHSSIGRMSMLWRLDLQGLR-LKNLPKEMSSMRS 686

Query: 707 LSTLNLSGLSKF--REFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLK-DC 762
           L+ ++LS  +     +   +    + L+ ++L+    +  LP +I+ LS  +L  L+ D 
Sbjct: 687 LTEIDLSNCNVVTKSKLEALFGGLESLIILYLKDCGNLLELPVNIDSLS--LLYELRLDG 744

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            N+K LP++   L  LR++Y   C KL  ++E    +E L V
Sbjct: 745 SNVKMLPTSFKNLSRLRILYLDNCKKLGCLSEVPPHIEELHV 786


>gi|168005435|ref|XP_001755416.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693544|gb|EDQ79896.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 624

 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 15/280 (5%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEV 91
           L++KGC  L+SLP  +++LK L T ++SGC  L   P+ + ++  L+ LY+ G  ++  +
Sbjct: 4   LSIKGCDRLTSLPKELNNLKSLTTFDISGCMNLTSLPKELGNLTTLTSLYMSGCANLTSL 63

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
           P  +  L  L    +  C+NL  LP  +  L SL   N+S C  L ++P  LG + +L  
Sbjct: 64  PKELGNLTSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELGNLTTLTV 123

Query: 152 LDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVA 206
           L +SG    T++ +   ++     L SLY SGC    +      +L    +   S C   
Sbjct: 124 LYMSGCENLTSLPKELGNL---TTLTSLYISGCENLTSLPKELGNLTSLTIFYMSYCKNL 180

Query: 207 LMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLL 264
             LP  L  + SLT  ++S C     ++P ++ NL SL   Y++   N  +LP  +  L 
Sbjct: 181 TSLPKELGNLTSLTSFNMSYCK-NMTSLPKELGNLTSLTIFYMSYCKNLTSLPKGLGNLT 239

Query: 265 NLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           +L    +  CK + SLP+   NL  +     N C +L +L
Sbjct: 240 SLTSFNMSYCKNMTSLPKELGNLTSLTTFYMNRCKNLTSL 279



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 33/294 (11%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+  Y++   ++T +P  ++ +T L LL + GC NL+SLP  + +L  L +L +
Sbjct: 355 LGNLTSLTKFYIERCENLTSLPKELDNITSLTLLCMSGCANLTSLPKELGNLTSLISLYM 414

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC+ L   P+ + ++  L    +    ++  +P  +  L  L  LY++ C NL  LP  
Sbjct: 415 SGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTSLTSLYMSRCANLTSLPKE 474

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRS 174
           +  L SL +L +SGC  L ++P  LG + SL+  D+S     T++ +   ++     L S
Sbjct: 475 LGNLTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNL---TTLTS 531

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
           LY SGC                        + L+   L+ + SLT  D+  C     ++P
Sbjct: 532 LYMSGC----------------------VNLTLLPKELSNLTSLTTFDIERCE-NLTSLP 568

Query: 235 SDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            ++ NL SL +  ++R  N   L   +  L +L    +  C+ L SLP+   NL
Sbjct: 569 KELGNLTSLTKFNMSRCKNLTLLSKELGNLTSLTSFHISGCENLTSLPKELGNL 622



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 32/278 (11%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++T +P  +  LT L    +  CKNL+SLP  + +L  L  L +SGC  L   P+ + ++
Sbjct: 83  NLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELGNLTTLTVLYMSGCENLTSLPKELGNL 142

Query: 76  EDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+ LY+ G  ++  +P  +  L  L + Y++ CKNL  LP  +  L SL + N+S C 
Sbjct: 143 TTLTSLYISGCENLTSLPKELGNLTSLTIFYMSYCKNLTSLPKELGNLTSLTSFNMSYCK 202

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM---KNLRSLYFSGCNEPPASASWHL 191
            + ++P  LG + SL               +IF M   KNL SL       P    +   
Sbjct: 203 NMTSLPKELGNLTSL---------------TIFYMSYCKNLTSL-------PKGLGNLTS 240

Query: 192 HLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
              FN+   S C     LP  L  + SLT   ++ C     ++P ++ NL SL   +++ 
Sbjct: 241 LTSFNM---SYCKNMTSLPKELGNLTSLTTFYMNRCK-NLTSLPKELVNLTSLTSFHISG 296

Query: 251 -NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
             N  +LP  +  L +L   ++E C+ L SLP+   NL
Sbjct: 297 CENLTSLPKELGNLTSLTTFDIERCENLTSLPKELGNL 334



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 31/293 (10%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ LY+ G  ++T +P  +  LT L    ++ C+NL+SLP  + +L  L    +
Sbjct: 43  LGNLTTLTSLYMSGCANLTSLPKELGNLTSLTTFDIERCENLTSLPKELGNLTSLTKFNM 102

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C  L   P+ + ++  L+ LY+ G  ++  +P  +  L  L  LY++ C+NL  LP  
Sbjct: 103 SRCKNLTSLPKELGNLTTLTVLYMSGCENLTSLPKELGNLTTLTSLYISGCENLTSLPKE 162

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL--- 175
           +  L SL    +S C  L ++P  LG + SL   ++S    +  TS    + NL SL   
Sbjct: 163 LGNLTSLTIFYMSYCKNLTSLPKELGNLTSLTSFNMS--YCKNMTSLPKELGNLTSLTIF 220

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
           Y S C    +       LP                 L  + SLT  ++S C     ++P 
Sbjct: 221 YMSYCKNLTS-------LP---------------KGLGNLTSLTSFNMSYCK-NMTSLPK 257

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           ++ NL SL   Y+NR  N  +LP  +  L +L    +  C+ L SLP+   NL
Sbjct: 258 ELGNLTSLTTFYMNRCKNLTSLPKELVNLTSLTSFHISGCENLTSLPKELGNL 310



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 145/308 (47%), Gaps = 30/308 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+  Y++   ++T +P  +  LT L    + GC+NL+SLP  + +L  L T ++
Sbjct: 259 LGNLTSLTTFYMNRCKNLTSLPKELVNLTSLTSFHISGCENLTSLPKELGNLTSLTTFDI 318

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  L   P+ + ++  L+   +    ++  +P  +  L  L   Y+  C+NL  LP  
Sbjct: 319 ERCENLTSLPKELGNLTSLTIFNMSRCKNLTSLPEELGNLTSLTKFYIERCENLTSLPKE 378

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           ++ + SL  L +SGC  L ++P  LG + SL  L +SG A    TS    + NL SL   
Sbjct: 379 LDNITSLTLLCMSGCANLTSLPKELGNLTSLISLYMSGCA--NLTSLPKELGNLTSLKI- 435

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                    SW             C     LP  L  + SLT L +S C     ++P ++
Sbjct: 436 ------FDMSW-------------CENLTSLPKELGNLTSLTSLYMSRCA-NLTSLPKEL 475

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---N 293
            NL SL  LY++   N  +LP  +  L +L+  ++  C+ L SLP+   NL  + +   +
Sbjct: 476 GNLTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTTLTSLYMS 535

Query: 294 GCSSLVTL 301
           GC +L  L
Sbjct: 536 GCVNLTLL 543



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 2/150 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L  LY+ G  ++T +P  +  LT L++  +  C+NL+SLP  + +L  L +L +
Sbjct: 475 LGNLTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTTLTSLYM 534

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC  L   P+ ++++  L+   ++   ++  +P  +  L  L    ++ CKNL  L   
Sbjct: 535 SGCVNLTLLPKELSNLTSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTLLSKE 594

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVES 148
           +  L SL + ++SGC  L ++P  LG + S
Sbjct: 595 LGNLTSLTSFHISGCENLTSLPKELGNLIS 624



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 1/131 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L    +  C+NL  LP+ +  L  L+  N+S        PE   +   L + ++E  
Sbjct: 310 LTSLTTFDIERCENLTSLPKELGNLTSLTIFNMSRCKNLTSLPEELGNLTSLTKFYIERC 369

Query: 740 A-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  ++ ++   L  +  C NL SLP  +  L SL  +Y SGC+ L ++ + LG 
Sbjct: 370 ENLTSLPKELDNITSLTLLCMSGCANLTSLPKELGNLTSLISLYMSGCANLTSLPKELGN 429

Query: 799 VESLEVRLSSW 809
           + SL++   SW
Sbjct: 430 LTSLKIFDMSW 440



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 671 RELSLAIEL--LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           R  SL  EL  L  L    ++GC NL  LP+ +  L  L++L +SG +     P+   + 
Sbjct: 11  RLTSLPKELNNLKSLTTFDISGCMNLTSLPKELGNLTTLTSLYMSGCANLTSLPKELGNL 70

Query: 729 DQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             L    +E    +  LP  +  L+     N+  CKNL SLP  +  L +L ++Y SGC 
Sbjct: 71  TSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELGNLTTLTVLYMSGCE 130

Query: 788 KLKNVTETLGKVESL 802
            L ++ + LG + +L
Sbjct: 131 NLTSLPKELGNLTTL 145



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 16/178 (8%)

Query: 641 PQEPGNCSRLW----EEADEFPDIVQVLSDGTDIREL---------SLAIEL--LFGLVQ 685
           P+E GN + L     E  +    + + L + T + +          SL  EL  L  L  
Sbjct: 64  PKELGNLTSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELGNLTTLTV 123

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGL 744
           L ++GC+NL  LP+ +  L  L++L +SG       P+   +   L   ++     +  L
Sbjct: 124 LYMSGCENLTSLPKELGNLTTLTSLYISGCENLTSLPKELGNLTSLTIFYMSYCKNLTSL 183

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P  +  L+     N+  CKN+ SLP  +  L SL + Y S C  L ++ + LG + SL
Sbjct: 184 PKELGNLTSLTSFNMSYCKNMTSLPKELGNLTSLTIFYMSYCKNLTSLPKGLGNLTSL 241



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 1/128 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAI 741
           L  L ++GC NL  LP+ +  L  L +L +SG +     P+   +   L    +     +
Sbjct: 385 LTLLCMSGCANLTSLPKELGNLTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENL 444

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP  +  L+      +  C NL SLP  +  L SL  +Y SGC+ L ++ + LG + S
Sbjct: 445 TSLPKELGNLTSLTSLYMSRCANLTSLPKELGNLTSLISLYMSGCANLTSLPKELGNLTS 504

Query: 802 LEVRLSSW 809
           L++   SW
Sbjct: 505 LKIFDMSW 512



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 5/168 (2%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           C RL     E  ++  +    +S   ++  L   +  L  L  L ++GC NL  LP+ + 
Sbjct: 9   CDRLTSLPKELNNLKSLTTFDISGCMNLTSLPKELGNLTTLTSLYMSGCANLTSLPKELG 68

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKD 761
            L  L+T ++         P+   +   L + ++     +  LP  +  L+   +  +  
Sbjct: 69  NLTSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTSLPKELGNLTTLTVLYMSG 128

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
           C+NL SLP  +  L +L  +Y SGC  L ++ + LG + SL +   S+
Sbjct: 129 CENLTSLPKELGNLTTLTSLYISGCENLTSLPKELGNLTSLTIFYMSY 176



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L +  ++ CKNL  LP+ +  L  L+ L +SG       P+   +   L  +++ G 
Sbjct: 94  LTSLTKFNMSRCKNLTSLPKELGNLTTLTVLYMSGCENLTSLPKELGNLTTLTSLYISGC 153

Query: 740 A-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L+   +  +  CKNL SLP  +  L SL     S C  + ++ + LG 
Sbjct: 154 ENLTSLPKELGNLTSLTIFYMSYCKNLTSLPKELGNLTSLTSFNMSYCKNMTSLPKELGN 213

Query: 799 VESLEVRLSSW 809
           + SL +   S+
Sbjct: 214 LTSLTIFYMSY 224



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 641 PQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P+E GN + L          +  +S   ++  L   +  L  L    ++ CKN+  LP+ 
Sbjct: 208 PKELGNLTSL---------TIFYMSYCKNLTSLPKGLGNLTSLTSFNMSYCKNMTSLPKE 258

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNL 759
           +  L  L+T  ++        P+   +   L   H+ G   +  LP  +  L+     ++
Sbjct: 259 LGNLTSLTTFYMNRCKNLTSLPKELVNLTSLTSFHISGCENLTSLPKELGNLTSLTTFDI 318

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           + C+NL SLP  +  L SL +   S C  L ++ E LG + SL
Sbjct: 319 ERCENLTSLPKELGNLTSLTIFNMSRCKNLTSLPEELGNLTSL 361



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIE 749
           C+NL  LP+ +  L  L++L +S  +     P+   +   L+ +++ G A +  LP  + 
Sbjct: 441 CENLTSLPKELGNLTSLTSLYMSRCANLTSLPKELGNLTSLISLYMSGCANLTSLPKELG 500

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
            L+   + ++  C+NL SLP  +  L +L  +Y SGC  L  + + L  + SL       
Sbjct: 501 NLTSLKIFDMSWCENLTSLPKELGNLTTLTSLYMSGCVNLTLLPKELSNLTSLTT----- 555

Query: 810 NRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVDKCMKLS 855
                   FD +E+   E +T L K EL   +   K N+ +C  L+
Sbjct: 556 --------FD-IER--CENLTSLPK-ELGNLTSLTKFNMSRCKNLT 589



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L+ L ++GC NL  LP+ +  L  L   ++S        P+   +   L  +++ G 
Sbjct: 478 LTSLISLYMSGCANLTSLPKELGNLTSLKIFDMSWCENLTSLPKELGNLTTLTSLYMSGC 537

Query: 740 A-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L+     +++ C+NL SLP  +  L SL     S C  L  +++ LG 
Sbjct: 538 VNLTLLPKELSNLTSLTTFDIERCENLTSLPKELGNLTSLTKFNMSRCKNLTLLSKELGN 597

Query: 799 VESL 802
           + SL
Sbjct: 598 LTSL 601



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIE 749
           C+NL  LP+ +  L  L++L +SG       P+  S+   L    +E    +  LP  + 
Sbjct: 513 CENLTSLPKELGNLTTLTSLYMSGCVNLTLLPKELSNLTSLTTFDIERCENLTSLPKELG 572

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            L+     N+  CKNL  L   +  L SL   + SGC  L ++ + LG + S
Sbjct: 573 NLTSLTKFNMSRCKNLTLLSKELGNLTSLTSFHISGCENLTSLPKELGNLIS 624



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L    ++ CKN+  LP+ +  L  L+   +S        P+   +   L   ++   
Sbjct: 190 LTSLTSFNMSYCKNMTSLPKELGNLTSLTIFYMSYCKNLTSLPKGLGNLTSLTSFNMSYC 249

Query: 740 A-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L+      +  CKNL SLP  +  L SL   + SGC  L ++ + LG 
Sbjct: 250 KNMTSLPKELGNLTSLTTFYMNRCKNLTSLPKELVNLTSLTSFHISGCENLTSLPKELGN 309

Query: 799 VESL 802
           + SL
Sbjct: 310 LTSL 313



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 9/175 (5%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIE 749
           CKNL  LP+ +  L  L++ N+S        P+   +   L   ++     +  LP  + 
Sbjct: 225 CKNLTSLPKGLGNLTSLTSFNMSYCKNMTSLPKELGNLTSLTTFYMNRCKNLTSLPKELV 284

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
            L+     ++  C+NL SLP  +  L SL       C  L ++ + LG + SL +    +
Sbjct: 285 NLTSLTSFHISGCENLTSLPKELGNLTSLTTFDIERCENLTSLPKELGNLTSLTI----F 340

Query: 810 NRPKMQNDFDCVEQSAVETVTKLAKAELLR--DSDSWKKNVDKCMKLSTTATSAC 862
           N  + +N     E+  +  +T L K  + R  +  S  K +D    L+    S C
Sbjct: 341 NMSRCKNLTSLPEE--LGNLTSLTKFYIERCENLTSLPKELDNITSLTLLCMSGC 393


>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
 gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
          Length = 1059

 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 145/313 (46%), Gaps = 32/313 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LY+    +TEVPS +  L  LELLT+ G   LS+ P  +  L+ LR L + 
Sbjct: 193 VEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTV-GNNKLSAFPPGVEKLQKLRELYIY 251

Query: 61  GC----SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           G     +KL  FP  V  ++ L +LY+    + EVPS +  LP LELL +   K L + P
Sbjct: 252 GVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNK-LSKFP 310

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
             +  L+ L+ L + G  +L  VP ++  + +LE L V    +      +  ++ LR LY
Sbjct: 311 PGVEKLQKLRKLYIYGN-QLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELY 369

Query: 177 FSG--CNEPPASASWHLHLP----FNLLGKSSCPVALMLPSL--------------TGVC 216
                  E P+      HL     +N    +  P    L  L              +GVC
Sbjct: 370 IQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVC 429

Query: 217 SLTKLDLSDCGLGE-AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           SL  L+L   G  + +  P  ++ L  L++LY+  N    +P+S+  L NLE L + + K
Sbjct: 430 SLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNK 489

Query: 276 RLQSLPQIPPNLQ 288
               L   PP ++
Sbjct: 490 ----LSTFPPGVE 498



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 142/302 (47%), Gaps = 33/302 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++S++ L  LY+   +++E+P  +E L  LE L +K  K L+ LP  I S  CL  +   
Sbjct: 78  ISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNK-LTKLPTKIFS--CLNLVNFD 134

Query: 61  GC-SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
              +KL  FP  V  ++ L +LY+ G  + EVPS +  LP LE L ++  K L   P  +
Sbjct: 135 ASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSNNK-LSTFPPGV 193

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L+ L+ L +    +L  VP  +  +  LE L V    +      +  ++ LR LY  G
Sbjct: 194 EKLQKLRELYIQD-NQLTEVPSGVCSLPHLELLTVGNNKLSAFPPGVEKLQKLRELYIYG 252

Query: 180 --CNE------PPASASWH----LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
             C+       PP          L++  N L +        +PS  GVCSL  L+L   G
Sbjct: 253 VKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTE--------VPS--GVCSLPHLELLTVG 302

Query: 228 LGE-AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
             + +  P  ++ L  L++LY+  N    +P+S+  L NLE L + + K    L   PP 
Sbjct: 303 NNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNK----LSTFPPG 358

Query: 287 LQ 288
           ++
Sbjct: 359 VE 360



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 27/277 (9%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L    +T +P  +  +T LE+L +   K + S+P  I  L+ L  L+ +  + L   P
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEILDVSNNK-IISIPEAICRLQKLYRLD-AYSNMLTSLP 75

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           Q ++S++ L KLY+   +++E+P  +E L  LE L++ + K L +LP+ I    +L   +
Sbjct: 76  QAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNK-LTKLPTKIFSCLNLVNFD 134

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPAS 186
            S   KL   P  + K++ L EL + G  +    S +  + NL  L  S       PP  
Sbjct: 135 ASN-NKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSNNKLSTFPPGV 193

Query: 187 ASWH----LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLH 241
                   L++  N L +        +PS  GVCSL  L+L   G  + +A P  ++ L 
Sbjct: 194 EKLQKLRELYIQDNQLTE--------VPS--GVCSLPHLELLTVGNNKLSAFPPGVEKLQ 243

Query: 242 SLKELYL-----NRNNFVTLPASISGLLNLEELELED 273
            L+ELY+     + N   T P  +  L  L EL ++D
Sbjct: 244 KLRELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQD 280



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 49/226 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LY+    +TEVPS +  L  LELLT+ G   LS  P  +  L+ LR L + 
Sbjct: 405 VEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTV-GNNKLSKFPPGVEKLQKLRKLYIY 463

Query: 61  G----------CS------------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           G          CS            KL  FP  V  ++ L  L +  +   E P  +  L
Sbjct: 464 GNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLKSLSVPASQFDEFPRQVLQL 523

Query: 99  PGLELLYLNEC------------------------KNLVR-LPSSINGLKSLKTLNLSGC 133
             LE LY  +                          NL+R LPS+++ L +L+ + L   
Sbjct: 524 KTLEELYAGQAGGRKFDIVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRVVQLWN- 582

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            K +  P+ L ++ ++E+LD+    I R  +++     L+ L  SG
Sbjct: 583 NKFDTFPEVLCELPAMEKLDIRNNNITRLPTALHRADKLKDLDVSG 628



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 30/192 (15%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LY+ G  +TEVPSS+  L  LE+L++   K LS+ P  +  L+ L++L + 
Sbjct: 451 VEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNK-LSTFPPGVEKLQKLKSLSVP 509

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD---GTSIAEVPSSIELLPGLELLYLNECKNLVR-LP 116
             S+  +FP+ V  ++ L +LY     G     VP  +  L  L  L L    NL+R LP
Sbjct: 510 A-SQFDEFPRQVLQLKTLEELYAGQAGGRKFDIVPDEVGNLQHLWFLALE--NNLLRTLP 566

Query: 117 SSINGLKSLKTLNL---------SGCCKLE-------------NVPDTLGKVESLEELDV 154
           S+++ L +L+ + L            C+L               +P  L + + L++LDV
Sbjct: 567 STMSHLHNLRVVQLWNNKFDTFPEVLCELPAMEKLDIRNNNITRLPTALHRADKLKDLDV 626

Query: 155 SGTAIRRPTSSI 166
           SG  +  P   +
Sbjct: 627 SGNPLTYPPQDV 638



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 25/188 (13%)

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           + L  +P  +  +  L+ L++S   K+ ++P+ + +++ L  LD     +     +I  +
Sbjct: 23  QGLTSIPEEVFDITDLEILDVSNN-KIISIPEAICRLQKLYRLDAYSNMLTSLPQAISSL 81

Query: 170 KNLRSLYFSGCN--------EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTK 220
           + L+ LY    N        E      W L +  N L K        LP+    C +L  
Sbjct: 82  QGLKKLYVHSNNLSELPDGLEDLQKLEW-LWVKDNKLTK--------LPTKIFSCLNLVN 132

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
            D S+  L  +A P  ++ L  L+ELY+  N    +P+ +  L NLEEL++ + K    L
Sbjct: 133 FDASNNKL--SAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSNNK----L 186

Query: 281 PQIPPNLQ 288
              PP ++
Sbjct: 187 STFPPGVE 194


>gi|215261579|gb|ACJ64859.1| disease resistance protein RPP1-like protein R5 [Arabidopsis
            thaliana]
          Length = 1202

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 79/379 (20%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L DL L + +S+  +P SIE  T L++L L  C NL  LP +I +   L  L L
Sbjct: 775  LSTATNLEDLILRNCSSLVRIPCSIENATNLQILDLSDCSNLVELP-SIGNATRLEELNL 833

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            + CS L K P  + +  +L KL+L   S + E+P+ IE    L++L L+ C +L+ LP S
Sbjct: 834  NNCSSLVKLPSSINAT-NLQKLFLRNCSRVVELPA-IENATNLQVLDLHNCSSLLELPPS 891

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL--- 175
            I    +LK L++SGC +L+  P+    +E +  ++   TAI+    SI     L      
Sbjct: 892  IASATNLKKLDISGCSQLKCFPEISTNIEIVNLIE---TAIKEVPLSIMSWSRLSYFGMS 948

Query: 176  YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
            YF   NE P +                                  LD+            
Sbjct: 949  YFESLNEFPHA----------------------------------LDI------------ 962

Query: 236  DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
                   + +L L R +   +P  + G+  L  L L DCK L SLPQ+  NL+++ A+ C
Sbjct: 963  -------ITDLVLIREDIQEIPPWVKGMSRLGVLRLYDCKNLVSLPQLSDNLEYIVADNC 1015

Query: 296  SSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFP 355
             SL      L  C +   I        L+  N   ++     L +   +D G+    +F 
Sbjct: 1016 QSL----ERLDCCFNNREI-------HLIFPNCFNLNQEARDLIMHTSTD-GYA---IFS 1060

Query: 356  GSQIPKWFMYQNEGSSITV 374
            G+Q+P  F ++    S+ +
Sbjct: 1061 GTQVPACFNHRATSDSLKI 1079



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           AIE    L  L L+ C +L  LP +I++   L  L++SG S+ + FPEI+++ +    ++
Sbjct: 867 AIENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSQLKCFPEISTNIEI---VN 923

Query: 736 LEGTAIRGLPASI 748
           L  TAI+ +P SI
Sbjct: 924 LIETAIKEVPLSI 936



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 38/159 (23%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD +++ EL  +I     L +L LN C +L +LP +I+A   L  L L   S+  E P 
Sbjct: 810 LSDCSNLVELP-SIGNATRLEELNLNNCSSLVKLPSSINATN-LQKLFLRNCSRVVELPA 867

Query: 724 ITSSRD-QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           I ++ + Q+L++H                         +C +L  LP +I    +L+ + 
Sbjct: 868 IENATNLQVLDLH-------------------------NCSSLLELPPSIASATNLKKLD 902

Query: 783 PSGCSKLKNVTETLGKVESL--------EVRLS--SWNR 811
            SGCS+LK   E    +E +        EV LS  SW+R
Sbjct: 903 ISGCSQLKCFPEISTNIEIVNLIETAIKEVPLSIMSWSR 941


>gi|15237438|ref|NP_199457.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177582|dbj|BAB10813.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008004|gb|AED95387.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1123

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 133/259 (51%), Gaps = 26/259 (10%)

Query: 32  LLTLKGCKN-LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIA 89
           L+ L+ C++ L  L   + SL  LR ++L G   LK+ P +  +  +L KL +   TS+ 
Sbjct: 607 LVKLQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPDLSLAT-NLKKLDVSNCTSLV 665

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           E+ S+I+ L  LE L +  C+NL  LP  IN L+SL  LNL+GC KL + PD      ++
Sbjct: 666 ELSSTIQNLNQLEELQMERCENLENLPIGIN-LESLYCLNLNGCSKLRSFPDI---STTI 721

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
            EL +S TAI    + +    +L +LY+ G  +  +   W    P         P+  ML
Sbjct: 722 SELYLSETAIEEFPTEL----HLENLYYLGLYDMKSEKLWKRVQPLT-------PLMTML 770

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEE 268
                  SLTKL LSD       +PS   NLH+L+ L + R  N  TLP  ++  L LE+
Sbjct: 771 SP-----SLTKLFLSDIP-SLVELPSSFQNLHNLEHLNIARCTNLETLPTGVNLEL-LEQ 823

Query: 269 LELEDCKRLQSLPQIPPNL 287
           L+   C RL+S P I  N+
Sbjct: 824 LDFSGCSRLRSFPDISTNI 842



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 133/270 (49%), Gaps = 52/270 (19%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ E+ S+I+ L  LE L ++ C+NL +LP+ I+ L+ L  L L+GCSKL+ FP I  +
Sbjct: 662 TSLVELSSTIQNLNQLEELQMERCENLENLPIGIN-LESLYCLNLNGCSKLRSFPDISTT 720

Query: 75  MEDLSKLYLDGTSIAEVPSSIELL------------------------------PGLELL 104
              +S+LYL  T+I E P+ + L                               P L  L
Sbjct: 721 ---ISELYLSETAIEEFPTELHLENLYYLGLYDMKSEKLWKRVQPLTPLMTMLSPSLTKL 777

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
           +L++  +LV LPSS   L +L+ LN++ C  LE +P T   +E LE+LD SG +  R   
Sbjct: 778 FLSDIPSLVELPSSFQNLHNLEHLNIARCTNLETLP-TGVNLELLEQLDFSGCSRLRSFP 836

Query: 165 SIFLMKNLRSLYF--SGCNEPPASASWHLHLPF-NLLGKSSCP-VALMLPSLTGVCSLTK 220
            I    N+ SL    +G  E P        L F +++G ++   V+L +  L     L  
Sbjct: 837 DI--STNIFSLVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNISKLE---KLET 891

Query: 221 LDLSDC-GLGEA---AIPSDI----DNLHS 242
           +D SDC  L  A    IPS +    +N+HS
Sbjct: 892 VDFSDCEALSHANWDTIPSAVAMATENIHS 921



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 53/190 (27%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           +S+ T + ELS  I+ L  L +L +  C+NLE LP  I+ L+ L  LNL+G SK R FP+
Sbjct: 658 VSNCTSLVELSSTIQNLNQLEELQMERCENLENLPIGIN-LESLYCLNLNGCSKLRSFPD 716

Query: 724 ITSSRDQLL-----------EIHLEGTAIRGL-----------------------PASIE 749
           I+++  +L            E+HLE     GL                       P+  +
Sbjct: 717 ISTTISELYLSETAIEEFPTELHLENLYYLGLYDMKSEKLWKRVQPLTPLMTMLSPSLTK 776

Query: 750 LLSGNILS-----------------NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           L   +I S                 N+  C NL++LP+ +N L  L  +  SGCS+L++ 
Sbjct: 777 LFLSDIPSLVELPSSFQNLHNLEHLNIARCTNLETLPTGVN-LELLEQLDFSGCSRLRSF 835

Query: 793 TETLGKVESL 802
            +    + SL
Sbjct: 836 PDISTNIFSL 845



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 28/141 (19%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD   + EL  + + L  L  L +  C NLE LP  ++ L+ L  L+ SG S+ R FP+
Sbjct: 779 LSDIPSLVELPSSFQNLHNLEHLNIARCTNLETLPTGVN-LELLEQLDFSGCSRLRSFPD 837

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           I+++   +  + L+GT I  +P  IE                            L  +  
Sbjct: 838 ISTN---IFSLVLDGTGIEEVPWWIE------------------------DFYRLSFLSM 870

Query: 784 SGCSKLKNVTETLGKVESLEV 804
            GC+ L+ V+  + K+E LE 
Sbjct: 871 IGCNNLQGVSLNISKLEKLET 891



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 32/56 (57%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L LDGT I EVP  IE    L  L++ GC NL  + + IS L+ L T++ S C  L
Sbjct: 845 LVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNISKLEKLETVDFSDCEAL 900



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 37/67 (55%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CSRL    D   +I  ++ DGT I E+   IE  + L  L++ GC NL+ +   IS L+ 
Sbjct: 829 CSRLRSFPDISTNIFSLVLDGTGIEEVPWWIEDFYRLSFLSMIGCNNLQGVSLNISKLEK 888

Query: 707 LSTLNLS 713
           L T++ S
Sbjct: 889 LETVDFS 895


>gi|399920216|gb|AFP55563.1| lrr [Rosa rugosa]
          Length = 407

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 131/312 (41%), Gaps = 76/312 (24%)

Query: 200 KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
           +S  P+  ++ SL  +  L  L L+DC L E  IP+DI +L SL  L L  NNFV+LPAS
Sbjct: 110 ESPHPLIPLIASLKHLSYLRTLKLNDCNLCEGEIPNDIGSLSSLWMLELRGNNFVSLPAS 169

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQF-VRANGCSSLVTLFGALKLCRSKYTIINCI 318
           I  L  L  +++E+CKRLQ LP++P N    V+ N C+SL        L R    +++C+
Sbjct: 170 IHLLSKLRVIDVENCKRLQHLPELPVNDSLHVKTNNCTSLQVFPDPPDLYRLSTFLLSCV 229

Query: 319 DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
                   N L+    R +          +    V PGS+IP WF  Q+ G S+     S
Sbjct: 230 --------NCLSKETHRSF----------YYFRFVIPGSEIPGWFNNQSVGDSVMR---S 268

Query: 379 YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY-FRGKFGHV 437
           YL                                             H I  FR K  ++
Sbjct: 269 YL-------------------------------------------RMHVINGFRAK-QNI 284

Query: 438 VSDHLWLLFLPRHGHNW-----QFESNLIRLSFRSI----SDPTWKVKRCGFHPIYMHEV 488
           VSDH  L+ LP H         +   N +   FRS     ++   ++K+CG   +Y H+ 
Sbjct: 285 VSDHFLLVVLPNHFRRPEDCLDEDTCNEVNFVFRSSGTAGNNRCLQIKKCGARVLYEHDT 344

Query: 489 EEFDETTKQSTR 500
           EE      Q  R
Sbjct: 345 EELISKMNQYPR 356



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLP 99
           L  L  ++  L  LRTL+L+ C+  + + P  + S+  L  L L G +   +P+SI LL 
Sbjct: 115 LIPLIASLKHLSYLRTLKLNDCNLCEGEIPNDIGSLSSLWMLELRGNNFVSLPASIHLLS 174

Query: 100 GLELLYLNECKNLVRLPS-SINGLKSLKTLNLSGCCKLENVPD 141
            L ++ +  CK L  LP   +N    +KT N   C  L+  PD
Sbjct: 175 KLRVIDVENCKRLQHLPELPVNDSLHVKTNN---CTSLQVFPD 214



 Score = 39.3 bits (90), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 1   MASMKDLS---DLYLDGTSITE--VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR 55
           +AS+K LS    L L+  ++ E  +P+ I  L+ L +L L+G  N  SLP +I  L  LR
Sbjct: 119 IASLKHLSYLRTLKLNDCNLCEGEIPNDIGSLSSLWMLELRG-NNFVSLPASIHLLSKLR 177

Query: 56  TLELSGCSKLKKFPQI 71
            +++  C +L+  P++
Sbjct: 178 VIDVENCKRLQHLPEL 193


>gi|297741887|emb|CBI33322.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 9/171 (5%)

Query: 14  GTSITEVPSSIELLT--------GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           G  + ++  S+ L+          LE+LTL+GC NL  LP  I  LK L+TL  +GCSKL
Sbjct: 24  GNKVIDLSYSVHLIKIPDFSSVPNLEILTLEGCVNLELLPRGIYKLKHLQTLSCNGCSKL 83

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           ++FP+I  +M  L  L L G +I ++PSSI  L GL+ L L +C  L ++P  I  L SL
Sbjct: 84  ERFPKIKGNMGKLRVLDLSGIAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSL 143

Query: 126 KTLNLSGCCKLE-NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           + L+L  C  +E  +P  +  + SL++L++ G       ++I  +  L++L
Sbjct: 144 EVLDLGNCNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKAL 194



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 106/215 (49%), Gaps = 33/215 (15%)

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL--------PGLELLYLNECKNLVRLPS 117
           K   +++    ++ +L+  G  + ++  S+ L+        P LE+L L  C NL  LP 
Sbjct: 6   KNLVELLLRNNNIKQLW-RGNKVIDLSYSVHLIKIPDFSSVPNLEILTLEGCVNLELLPR 64

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            I  LK L+TL+ +GC KLE  P   G +  L  LD+SG AI    SSI  +  L++L  
Sbjct: 65  GIYKLKHLQTLSCNGCSKLERFPKIKGNMGKLRVLDLSGIAIMDLPSSISHLNGLQTLLL 124

Query: 178 SGCNEPPASASWHLH-LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
             C++        LH +P ++   SS  V               LDL +C + E  IPSD
Sbjct: 125 EDCSK--------LHKIPIHICHLSSLEV---------------LDLGNCNIMEGGIPSD 161

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           I +L SL++L L   +F  +PA+I+ L  L+ L L
Sbjct: 162 ICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNL 196



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 19/187 (10%)

Query: 661 VQVLSDGTDIRELSLAIELLF--------GLVQLTLNGCKNLERLPRTISALKYLSTLNL 712
           ++ L  G  + +LS ++ L+          L  LTL GC NLE LPR I  LK+L TL+ 
Sbjct: 18  IKQLWRGNKVIDLSYSVHLIKIPDFSSVPNLEILTLEGCVNLELLPRGIYKLKHLQTLSC 77

Query: 713 SGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
           +G SK   FP+I  +  +L  + L G AI  LP+SI  L+G     L+DC  L  +P  I
Sbjct: 78  NGCSKLERFPKIKGNMGKLRVLDLSGIAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHI 137

Query: 773 NGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQ-NDFDCVEQSAVETVTK 831
             L SL ++    C    N+ E  G + S    LSS  +  ++   F C+      T+ +
Sbjct: 138 CHLSSLEVLDLGNC----NIME--GGIPSDICHLSSLQKLNLEGGHFSCIP----ATINQ 187

Query: 832 LAKAELL 838
           L++ + L
Sbjct: 188 LSRLKAL 194



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            +M  L  L L G +I ++PSSI  L GL+ L L+ C  L  +P+ I  L  L  L+L  
Sbjct: 91  GNMGKLRVLDLSGIAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGN 150

Query: 62  CSKLK-KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL 106
           C+ ++   P  +  +  L KL L+G   + +P++I  L  L+ L L
Sbjct: 151 CNIMEGGIPSDICHLSSLQKLNLEGGHFSCIPATINQLSRLKALNL 196


>gi|255564962|ref|XP_002523474.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537302|gb|EEF38933.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1091

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 201/483 (41%), Gaps = 72/483 (14%)

Query: 75   MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            ME+L +L +  ++I ++ +  E  P L  L L++  NL RLP  ++   +L ++ L GC 
Sbjct: 606  MENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLPD-LSSTTNLTSIELWGCE 664

Query: 135  KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
             L  +P ++ K + L  L++      R   S+  +++L                      
Sbjct: 665  SLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLIQLESL---------------------- 702

Query: 195  FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE--AAIPSDIDNLHSLKELYLNRNN 252
             ++L  + CP   MLP +     +  L L D GL E  +++PS +DNL      +    N
Sbjct: 703  -SILSLACCPNLKMLPDIPR--GVKDLSLHDSGLEEWPSSVPS-LDNLTFFSVAFCK--N 756

Query: 253  FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKY 312
              +LP S+    +L +++L  C  L+ LP+IP             L    G L+  R  Y
Sbjct: 757  LRSLP-SLLQWKSLRDIDLSGCSNLKVLPEIP------------DLPWQVGILQGSRKDY 803

Query: 313  T---IINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEG 369
                 +NC++     R N +A +  R  ++  A +   +  ++   GS+ P+WF YQ+ G
Sbjct: 804  CRFHFLNCVNLGWYARLNIMACAQQR--IKEIASAKTRNYFAVALAGSKTPEWFSYQSLG 861

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY 429
             SIT++ P+  +N    +GFA C V +       +   H Y A E             + 
Sbjct: 862  CSITISLPTCSFNT-MFLGFAFCAVLEFEFPLVISRNSHFYIACESRFENTNDDIRDDLS 920

Query: 430  FRGKFGHVV--SDH--LWLLFLPRHGHNW-------------QFESNLIRLSFRSISDPT 472
            F       +  SDH  LW  F     ++W             +F++    LS    S   
Sbjct: 921  FSASSLETIPESDHVFLWYRFNSSDLNSWLIQNCCILRKASFEFKAQYRFLSNHHPSTEK 980

Query: 473  W--KVKRCGFHPIYMHEVEEF---DETTKQSTRFTSCNLNEVHHDFVGSNMEVAQASGSG 527
            W  KVKRCG H IY   V+     D+   Q    T+ N      D+  +   +    GSG
Sbjct: 981  WEVKVKRCGVHLIYNENVQNAIAGDKNQWQQVTETNSNNKRSRDDYCSNQTNIIADGGSG 1040

Query: 528  SSQ 530
             ++
Sbjct: 1041 YAE 1043



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 78/142 (54%), Gaps = 6/142 (4%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++S  +L+ + L G  S+ E+PSS++    L  L L  CK L SLP  I  L+ L  L L
Sbjct: 649 LSSTTNLTSIELWGCESLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLIQ-LESLSILSL 707

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C  LK  P I   ++DLS   L  + + E PSS+  L  L    +  CKNL  LPS +
Sbjct: 708 ACCPNLKMLPDIPRGVKDLS---LHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLPSLL 764

Query: 120 NGLKSLKTLNLSGCCKLENVPD 141
              KSL+ ++LSGC  L+ +P+
Sbjct: 765 Q-WKSLRDIDLSGCSNLKVLPE 785



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 7/179 (3%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M++L +L +  ++I ++ +  E    L  L L    NL  LP  +SS   L ++EL GC 
Sbjct: 606 MENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKRLP-DLSSTTNLTSIELWGCE 664

Query: 64  KLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            L + P  V   + L  L LD    +  +PS I+ L  L +L L  C NL  LP    G+
Sbjct: 665 SLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLIQ-LESLSILSLACCPNLKMLPDIPRGV 723

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           K L +L+ SG   LE  P ++  +++L    V+     R   S+   K+LR +  SGC+
Sbjct: 724 KDL-SLHDSG---LEEWPSSVPSLDNLTFFSVAFCKNLRSLPSLLQWKSLRDIDLSGCS 778



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           + + DL L  + + E PSS+  L  L   ++  CKNL SLP ++   K LR ++LSGCS 
Sbjct: 721 RGVKDLSLHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLP-SLLQWKSLRDIDLSGCSN 779

Query: 65  LKKFPQI 71
           LK  P+I
Sbjct: 780 LKVLPEI 786



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 23/170 (13%)

Query: 646 NCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           N  +LW + +  P + ++ LS   +++ L   +     L  + L GC++L  +P ++   
Sbjct: 618 NIEQLWNDNEGPPKLRRLDLSKSVNLKRLP-DLSSTTNLTSIELWGCESLLEIPSSVQKC 676

Query: 705 KYLSTLNLSGLSKFREFPEITSSRD--------------------QLLEIHLEGTAIRGL 744
           K L +LNL    + R  P +                          + ++ L  + +   
Sbjct: 677 KKLYSLNLDNCKELRSLPSLIQLESLSILSLACCPNLKMLPDIPRGVKDLSLHDSGLEEW 736

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           P+S+  L      ++  CKNL+SLPS +   +SLR +  SGCS LK + E
Sbjct: 737 PSSVPSLDNLTFFSVAFCKNLRSLPSLLQ-WKSLRDIDLSGCSNLKVLPE 785


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 21/293 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L+++G  +TEVPS +  L  LE+L++   K LS+ P  +  L+ LR L++ 
Sbjct: 209 VEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNK-LSTFPPGVEKLQKLRQLDIY 267

Query: 61  GC----SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           G     +KL  FP  V  ++ L +L + G  +AEVP  +  LP LE+L ++  K L   P
Sbjct: 268 GVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCSLPNLEVLDVSNSK-LSTFP 326

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
             +  L+ L+ L+++G  +L  VP  +  + +LEEL V    +      +  ++ LR LY
Sbjct: 327 PGVEKLQKLRQLHINGN-QLTEVPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLY 385

Query: 177 FSG---CNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
             G      PP   S    LP   +L   +  ++   P +  +  L +L + D  L E  
Sbjct: 386 IYGNQLTEVPPGVCS----LPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTE-- 439

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
           +PS + +L +L+ +Y+N N   T P  +  L  L EL +        L +IPP
Sbjct: 440 VPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLRELHVHG----NQLTEIPP 488



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 30/291 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  L+++G  +TEVPS +  L  LE L++   K LS+ P  +  L+ LR L + 
Sbjct: 329 VEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNK-LSTFPPGVEKLQKLRQLYIY 387

Query: 61  G----------CS------------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           G          CS            KL  FP  V  ++ L +LY+    + EVPS +  L
Sbjct: 388 GNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSL 447

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE++Y+N  K L   P  +  L+ L+ L++ G  +L  +P  +  + +LE L +S   
Sbjct: 448 PNLEVVYVNNNK-LSTFPPGVERLQKLRELHVHG-NQLTEIPPVVCYLTNLEVLIISDNP 505

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           IR     +  +  L++LY SGC  P              L    C   ++   +  +  L
Sbjct: 506 IRHLPDGVRRLTRLKTLYVSGCQFPGQVLQLKT---LEKLHAGGCKFDMLPDEVGNLQHL 562

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
             L LS   L    +PS + +LH+L+E++L++N F T P  +  L  +E+L
Sbjct: 563 WFLSLSSNLL--RTLPSTMSHLHNLREVHLDKNKFDTFPEVLCDLPAMEKL 611



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 49/303 (16%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L+++G  +TEVPS +  L  LE+L++                         
Sbjct: 163 LTELQKLRELHINGNQLTEVPSGVCSLPNLEVLSVSN----------------------- 199

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL  FP  V  ++ L +L+++G  + EVPS +  LP LE+L +   K L   P  + 
Sbjct: 200 --NKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNK-LSTFPPGVE 256

Query: 121 GLKSLKTLNLSGC-C---KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
            L+ L+ L++ G  C   KL   P  + K++ L EL + G  +      +  + NL  L 
Sbjct: 257 KLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCSLPNLEVLD 316

Query: 177 FSG---CNEPPASASW----HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL-DLSDCGL 228
            S       PP          LH+  N L +        +PS  GVCSL  L +LS    
Sbjct: 317 VSNSKLSTFPPGVEKLQKLRQLHINGNQLTE--------VPS--GVCSLPNLEELSVYNN 366

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
             +  P  ++ L  L++LY+  N    +P  +  L NLE L + + K L + P     LQ
Sbjct: 367 KLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNK-LSTFPPGVEKLQ 425

Query: 289 FVR 291
            +R
Sbjct: 426 KLR 428



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 39/290 (13%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++  L  L L    +T +P  +  +T LE L +   + L+S+P  I  L+ L  L+  G 
Sbjct: 11  TVDGLLTLDLSNQGLTSIPEEVFDITDLEFLGVSNNR-LTSIPEAIGRLQKLSRLDAHG- 68

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           + L + PQ + S++ L+ LY+    +A +P  IE L  L LL + + + L  +P  +  L
Sbjct: 69  NMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNR-LTEVPPGVFLL 127

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            +L+ L++S   KL   P     VE L++L V G    + T     ++ LR L+ +G   
Sbjct: 128 PNLEVLDVSN-NKLSTFPPG---VEKLQKLRVLGIYDNQLTE----LQKLRELHING--- 176

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLGEAAIPSDIDNLH 241
                        N L +        +PS  GVCSL  L+ LS      +  P  ++ L 
Sbjct: 177 -------------NQLTE--------VPS--GVCSLPNLEVLSVSNNKLSTFPPGVEKLQ 213

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            L+EL++N N    +P+ +  L NLE L + + K L + P     LQ +R
Sbjct: 214 KLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNK-LSTFPPGVEKLQKLR 262



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 30/186 (16%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           ++ L +L++ G  +TE+P  +  LT LE+L +     +  LP  +  L  L+TL +SGC 
Sbjct: 470 LQKLRELHVHGNQLTEIPPVVCYLTNLEVLIISD-NPIRHLPDGVRRLTRLKTLYVSGC- 527

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-LPSSINGL 122
              +FP  V  ++ L KL+  G     +P  +  L    L +L+   NL+R LPS+++ L
Sbjct: 528 ---QFPGQVLQLKTLEKLHAGGCKFDMLPDEVGNL--QHLWFLSLSSNLLRTLPSTMSHL 582

Query: 123 KSLKTLNLSG---------CCKLE-------------NVPDTLGKVESLEELDVSGTAIR 160
            +L+ ++L            C L               +P  L + + L++LDVSG  + 
Sbjct: 583 HNLREVHLDKNKFDTFPEVLCDLPAMEKLFISNNNITRLPTALHRADKLKDLDVSGNPLT 642

Query: 161 RPTSSI 166
            P   +
Sbjct: 643 YPPQDV 648


>gi|297740948|emb|CBI31260.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 4/102 (3%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           I++ PS    +  L++L LKGCK L SLP +I  LKCL  L  SGCS L+ FP+I   ME
Sbjct: 643 ISKFPS----MPALKILRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKME 698

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           +L +L+LD T+I E+PSSI  L  LE L L  CKNLV LPS+
Sbjct: 699 NLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNLVSLPSA 740



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 51/86 (59%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GCK L  LP +I  LK L  L  SG S    FPEIT   + L E+HL+ TAI+ LP
Sbjct: 655 LRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKELHLDETAIKELP 714

Query: 746 ASIELLSGNILSNLKDCKNLKSLPST 771
           +SI  L+     NL+ CKNL SLPS 
Sbjct: 715 SSIYHLTALEFLNLEHCKNLVSLPSA 740



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           I++ PS    +P L++L L  CK L  LPSSI  LK L+ L  SGC  LE  P+   K+E
Sbjct: 643 ISKFPS----MPALKILRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKME 698

Query: 148 SLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHL--HLPFNLLGKS 201
           +L+EL +  TAI+   SSI+ +  L  L    C      P AS  + +    P +LL   
Sbjct: 699 NLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNLVSLPSASIKYRVCRCTPLHLLEDF 758

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLG 229
           +  + + +        +  + + + G+G
Sbjct: 759 AVSIIVAMEEADMAFCVQLIQMGNSGVG 786



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/42 (59%), Positives = 32/42 (76%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP 45
           M++L +L+LD T+I E+PSSI  LT LE L L+ CKNL SLP
Sbjct: 697 MENLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNLVSLP 738



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 6/138 (4%)

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
           +SL  LD+S + IR+       + NL+ +  S C      + +       +L    C   
Sbjct: 604 DSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSMPALKILRLKGCKKL 663

Query: 207 LMLPSLTGVCSLTKLDL---SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGL 263
             LPS   +C L  L+    S C   EA  P   + + +LKEL+L+      LP+SI  L
Sbjct: 664 RSLPS--SICELKCLECLWCSGCSNLEA-FPEITEKMENLKELHLDETAIKELPSSIYHL 720

Query: 264 LNLEELELEDCKRLQSLP 281
             LE L LE CK L SLP
Sbjct: 721 TALEFLNLEHCKNLVSLP 738



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LK CK L+SLPS+I  L+ L  ++ SGCS L+   E   K+E+L+
Sbjct: 657 LKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLK 701


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 33/273 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LYL G  + EVP+ +  L  L+ L L G + L  +P  +  L+ L+ L LS
Sbjct: 50  LGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQ-LREVPAELGQLRSLQELYLS 108

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +  L +LYL G  + EVP+ +  L  L +L L+    L  +P+ + 
Sbjct: 109 G-NQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLS-GNQLREVPAELG 166

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L+ L  L+LSG  +L  VP  LG++  LE+L ++G  +R   + +  ++ L+ LY SG 
Sbjct: 167 QLRDLHMLDLSG-NQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSGN 225

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
              E P             LG+              +  L +LDLS   L    IP+++ 
Sbjct: 226 QLREVPTE-----------LGQ--------------LRDLQELDLSGNQL--TGIPTELG 258

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L  L++LYL  N    +PA +  L +L  L+L
Sbjct: 259 QLCGLQDLYLAGNQLREVPAELGQLRDLHMLDL 291



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 105/188 (55%), Gaps = 6/188 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LYL G  + EVP+ +  L  L +L L G + L  +P  +  L+ L  L+LS
Sbjct: 119 LGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQ-LREVPAELGQLRDLHMLDLS 177

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L++ P  +  +  L KLYL G  + EVP+ +  L GL+ LYL+    L  +P+ + 
Sbjct: 178 G-NQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLS-GNQLREVPTELG 235

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L+ L+ L+LSG  +L  +P  LG++  L++L ++G  +R   + +  +++L  L  SG 
Sbjct: 236 QLRDLQELDLSG-NQLTGIPTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGN 294

Query: 180 -CNEPPAS 186
              E PA 
Sbjct: 295 QLREVPAE 302



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 26/185 (14%)

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           K L ++P+ +  L+SL+ L L G  +L  VP  LG++ SL+EL ++G  +R   + +  +
Sbjct: 41  KGLTQVPAELGQLRSLQELYLFGN-QLREVPAELGQLRSLQELYLAGNQLREVPAELGQL 99

Query: 170 KNLRSLYFS---------------GCNEPPASASWHLHLP--------FNLLGKSSCPVA 206
           ++L+ LY S               G  E   S +    +P         ++L  S   + 
Sbjct: 100 RSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLR 159

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            +   L  +  L  LDLS   L E  +P+++  L  L++LYL  N    +PA +  L  L
Sbjct: 160 EVPAELGQLRDLHMLDLSGNQLRE--VPAELGQLSRLEKLYLAGNQLREVPAELGQLRGL 217

Query: 267 EELEL 271
           +EL L
Sbjct: 218 QELYL 222



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LYL G  + EVP+ +  L  L+ L L G + L+ +P  +  L  L+ L L+
Sbjct: 211 LGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQ-LTGIPTELGQLCGLQDLYLA 269

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           G ++L++ P  +  + DL  L L G  + EVP+ +  L  L    + +   L+  PS I
Sbjct: 270 G-NQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDNDQLLTPPSEI 327



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 5/120 (4%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
            L  +P  +  L+ L  L L+G ++ RE P        L E++L G  + G+P  +  L 
Sbjct: 65  QLREVPAELGQLRSLQELYLAG-NQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLR 123

Query: 753 GNILSNLKDCKN-LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
           G  L  L    N L+ +P+ +  LR L M+  SG ++L+ V   LG++  L +   S N+
Sbjct: 124 G--LQELYLSGNQLREVPTELGQLRDLHMLDLSG-NQLREVPAELGQLRDLHMLDLSGNQ 180



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 27/245 (11%)

Query: 575 NSRAYDVFDDMPTKERASHLMCCINSMVSQAKAISQQ---GQFVKMISVDSGCMSCYKKW 631
           N   YD   ++ T + +   +  + + + Q +++ +    G  ++ +  + G +   ++ 
Sbjct: 23  NDVKYDDLGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQEL 82

Query: 632 ---GRQTVRRQSPQEPGNCSRLWE-------------EADEFPDIVQVLSDGTDIRELSL 675
              G Q   R+ P E G    L E             E  +   + ++   G  +RE+  
Sbjct: 83  YLAGNQL--REVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPT 140

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
            +  L  L  L L+G + L  +P  +  L+ L  L+LSG ++ RE P       +L +++
Sbjct: 141 ELGQLRDLHMLDLSGNQ-LREVPAELGQLRDLHMLDLSG-NQLREVPAELGQLSRLEKLY 198

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKN-LKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           L G  +R +PA +  L G  L  L    N L+ +P+ +  LR L+ +  SG ++L  +  
Sbjct: 199 LAGNQLREVPAELGQLRG--LQELYLSGNQLREVPTELGQLRDLQELDLSG-NQLTGIPT 255

Query: 795 TLGKV 799
            LG++
Sbjct: 256 ELGQL 260


>gi|168068939|ref|XP_001786264.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661795|gb|EDQ48924.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 313

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 143/284 (50%), Gaps = 12/284 (4%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+  +P SI+ L  L  L L  C +L +L  +I +L  L  L L GC  LK   + +
Sbjct: 27  DCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIGNLNSLVKLNLYGCGSLKALLESI 86

Query: 73  ASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            ++  L KL L G  S+  +P SI  L  L  L LN C++L  LP SI  L S   LNL 
Sbjct: 87  GNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSPMKLNLG 146

Query: 132 GCCKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNE----PPAS 186
            C  LE +P+++G + SL +LD+    +++    SI  + +L  L   GC      P + 
Sbjct: 147 VCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEALPKSI 206

Query: 187 ASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
            + +  +  NL G   C     LP S+  + SL  LDL  CG    A+P  I NL+SL +
Sbjct: 207 GNLNSLVDLNLYG---CVSLKALPESIGNLNSLVDLDLYTCG-SLKALPESIGNLNSLVK 262

Query: 246 LYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           L L    +   LP SI  L +L +L+L  C+ L++LP+   NL 
Sbjct: 263 LNLGDCQSLEALPKSIGNLNSLVDLDLFRCRSLKALPESIGNLN 306



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 127/259 (49%), Gaps = 26/259 (10%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +  SI  L  L  L L GC +L +LP +I +L  L  L+L+ C  LK  P+ + ++
Sbjct: 78  SLKALLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNL 137

Query: 76  EDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
               KL L    S+  +P SI  L  L  L L  CK+L  LP SI  L SL  LNL GC 
Sbjct: 138 NSPMKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCR 197

Query: 135 KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            LE +P ++G + SL +L++ G  +++    SI  + +L  L    C    A       L
Sbjct: 198 SLEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKA-------L 250

Query: 194 PFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NN 252
           P                S+  + SL KL+L DC   E A+P  I NL+SL +L L R  +
Sbjct: 251 P---------------ESIGNLNSLVKLNLGDCQSLE-ALPKSIGNLNSLVDLDLFRCRS 294

Query: 253 FVTLPASISGLLNLEELEL 271
              LP SI  L +L +L+L
Sbjct: 295 LKALPESIGNLNSLVDLDL 313



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 1/134 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV+L L GC++LE LP++I  L  L  LNL G    +  PE   + +
Sbjct: 175 LKALPESIGNLNSLVKLNLYGCRSLEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLN 234

Query: 730 QLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L+++ L    +++ LP SI  L+  +  NL DC++L++LP +I  L SL  +    C  
Sbjct: 235 SLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVDLDLFRCRS 294

Query: 789 LKNVTETLGKVESL 802
           LK + E++G + SL
Sbjct: 295 LKALPESIGNLNSL 308



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+  +P SI  L  L  L L +C++L  LP SI+ L SL  L+L  C  L+ + +++G +
Sbjct: 6   SLKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIGNL 65

Query: 147 ESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
            SL +L++ G  +++    SI  + +L  L   GC    A       LP           
Sbjct: 66  NSLVKLNLYGCGSLKALLESIGNLNSLVKLNLYGCGSLKA-------LP----------- 107

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLL 264
                S+  + SL  LDL+ C     A+P  I NL+S  +L L    +   LP SI  L 
Sbjct: 108 ----ESIGNLNSLVDLDLNICR-SLKALPKSIGNLNSPMKLNLGVCQSLEALPESIGNLN 162

Query: 265 NLEELELEDCKRLQSLPQIPPNLQ-FVRAN--GCSSLVTL 301
           +L +L+L  CK L++LP+   NL   V+ N  GC SL  L
Sbjct: 163 SLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGCRSLEAL 202



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)

Query: 645 GNCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           G+   L E       +V++ L     ++ L  +I  L  LV L LN C++L+ LP++I  
Sbjct: 77  GSLKALLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGN 136

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDC 762
           L     LNL         PE   + + L+++ L    +++ LP SI  L+  +  NL  C
Sbjct: 137 LNSPMKLNLGVCQSLEALPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSLVKLNLYGC 196

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           ++L++LP +I  L SL  +   GC  LK + E++G + SL
Sbjct: 197 RSLEALPKSIGNLNSLVDLNLYGCVSLKALPESIGNLNSL 236



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 3/162 (1%)

Query: 650 LWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           L E  D    +V + L     ++ L  +I  L  LV+L L GC +L+ L  +I  L  L 
Sbjct: 34  LPESIDNLNSLVDLDLYTCGSLKALRESIGNLNSLVKLNLYGCGSLKALLESIGNLNSLV 93

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            LNL G    +  PE   + + L+++ L    +++ LP SI  L+  +  NL  C++L++
Sbjct: 94  KLNLYGCGSLKALPESIGNLNSLVDLDLNICRSLKALPKSIGNLNSPMKLNLGVCQSLEA 153

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
           LP +I  L SL  +    C  LK + E++G + SL V+L+ +
Sbjct: 154 LPESIGNLNSLVKLDLRVCKSLKALPESIGNLNSL-VKLNLY 194



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV+L L  C++LE LP +I  L  L  L+L      +   E   + +
Sbjct: 7   LKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESIGNLN 66

Query: 730 QLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L++++L G  +++ L  SI  L+  +  NL  C +LK+LP +I  L SL  +  + C  
Sbjct: 67  SLVKLNLYGCGSLKALLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSLVDLDLNICRS 126

Query: 789 LKNVTETLGKVES 801
           LK + +++G + S
Sbjct: 127 LKALPKSIGNLNS 139



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASI 748
           GC +L+ LP +I  L  L  LNL         PE   + + L+++ L    +++ L  SI
Sbjct: 3   GCGSLKALPESIGNLNSLVKLNLRDCQSLEALPESIDNLNSLVDLDLYTCGSLKALRESI 62

Query: 749 ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             L+  +  NL  C +LK+L  +I  L SL  +   GC  LK + E++G + SL
Sbjct: 63  GNLNSLVKLNLYGCGSLKALLESIGNLNSLVKLNLYGCGSLKALPESIGNLNSL 116


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 144/275 (52%), Gaps = 10/275 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +   IE L  L+ L L   + L++LP  I  LK L++L LS
Sbjct: 136 IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIEQLKNLKSLYLS 194

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++   FP+ +  +++L  L+L+   I  +P+ I  L  L+ LYL++ + L+ LP  I 
Sbjct: 195 E-NQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ-LITLPKEIE 252

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+TL+LS   + + +P  +G++E+L+ LD+    ++     I  +KNL++L+ S  
Sbjct: 253 QLKNLQTLDLS-YNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLS-- 309

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALM-LPSLTGVCSLTKLDLSDCGLGE-AAIPSDID 238
           N         +    NLL  S     L  LP+   +  L  L + + G  +   +  +I 
Sbjct: 310 NNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN--EIEQLKNLQVLNFGSNQITTLSQEIG 367

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            L +LK L+LN N   TLP  I  L NL++L L +
Sbjct: 368 QLQNLKVLFLNNNQLTTLPKEIGQLKNLKKLYLNN 402



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 133/284 (46%), Gaps = 40/284 (14%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R LELS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L 
Sbjct: 50  VRVLELSR-QELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LT 107

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLE 150
            LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+
Sbjct: 108 TLPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 166

Query: 151 ELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALM 208
            LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   
Sbjct: 167 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI--- 223

Query: 209 LPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
           LP+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N F  +P  I  L NL+
Sbjct: 224 LPNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQ 281

Query: 268 ELELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
            L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 282 TLDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 324


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 142/282 (50%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++ +L+ L L    ITE+P +I  LT L  L L G   ++ +P  I++L  L  L+L 
Sbjct: 168 IANLTNLTHLILFSNQITEIPEAIANLTNLTQLDL-GDNQITEIPKAIANLTNLTQLDL- 225

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +++ + P+ +A++ +L+ L L    I E+P +I  L  L  L L+    +  +P +I 
Sbjct: 226 GDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLS-YNQITEIPKAIA 284

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L LS   K+  +P+ +  + +L +LD+S   I     +I  + NL  LYF+  
Sbjct: 285 NLTNLTQLVLSDN-KITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFN-- 341

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                         +N + + +  +A        + +LT+L LS   + +  IP  I NL
Sbjct: 342 --------------YNKITQIAEAIA-------KLTNLTELHLSSNQITQ--IPEAIANL 378

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L ELYLN N    +  +I+ L NL EL L D  ++  +P+
Sbjct: 379 TNLTELYLNYNKITQIAEAIAKLTNLTELHL-DGNQITQIPE 419



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 144/333 (43%), Gaps = 60/333 (18%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLK-----------------GCKNLSSL 44
           A+ +   +L L G  +TE+P  I  L  LE L L                     NL +L
Sbjct: 13  AATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKTL 72

Query: 45  PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELL 104
           P+ +  L  LR L++SG + L++ P +V  +  L +L L    I E+P +I  L  L  L
Sbjct: 73  PLELLGLPNLRKLDISG-NPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHL 131

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLS---------GCCKLEN-------------VPDT 142
            L     +   P +I  L +L  L+LS             L N             +P+ 
Sbjct: 132 ILF-SNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEA 190

Query: 143 LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASW----HLHLP 194
           +  + +L +LD+    I     +I  + NL  L   G N+    P A A+     HL L 
Sbjct: 191 IANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDL-GDNQITEIPKAIANLTNLTHLILF 249

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
            N +  +  P A     +  + +L +LDLS   + E  IP  I NL +L +L L+ N   
Sbjct: 250 SNQI--TEIPEA-----IANLTNLMQLDLSYNQITE--IPKAIANLTNLTQLVLSDNKIT 300

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            +P +I+ L NL +L+L D K +  +P+   NL
Sbjct: 301 EIPEAIANLTNLTQLDLSDNK-ITEIPETIANL 332



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++ +L++LY +   IT++  +I  LT L  L L     ++ +P  I++L  L  L L+
Sbjct: 329 IANLTNLTELYFNYNKITQIAEAIAKLTNLTELHL-SSNQITQIPEAIANLTNLTELYLN 387

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL 106
             +K+ +  + +A + +L++L+LDG  I ++P ++E LP LE L L
Sbjct: 388 -YNKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLPKLEKLDL 432



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 48/193 (24%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L++L+LDG  IT++P ++E L  LE L L+G    + LP++             
Sbjct: 398 IAKLTNLTELHLDGNQITQIPEALESLPKLEKLDLRG----NPLPIS------------- 440

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
                   P+I+ S+ ++        S+ E+ + + LL   E+  LNE K L+    S+ 
Sbjct: 441 --------PEILGSVYEVG-------SVEEIFNYLRLLRSGEVRPLNEAKLLLIGQGSVG 485

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG-KVES-----------LEELDVSGTAIRRPTSSIFL 168
               ++ L  +   K  N P T G  VE+           L   D  G  I   T   FL
Sbjct: 486 KTSLIERLIHNKYDK--NQPQTNGLNVETWNVQVNSKDIRLNVWDFGGQEIYHATHQFFL 543

Query: 169 MKNLRSLYFSGCN 181
            K  RSLY   CN
Sbjct: 544 TK--RSLYLLVCN 554


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 155/335 (46%), Gaps = 53/335 (15%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L     T +P  +E L  L+ L L G   L++LP  I  LK LR LEL+
Sbjct: 88  IGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYL-GSNRLTTLPNEIGQLKNLRVLELT 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++ K  P+ +  +++L  LYL    +  +P+ I  +  L+ LYL   + L  LP  I 
Sbjct: 147 -HNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNR-LTILPKEIG 204

Query: 121 GLKSLKTLNLS----------------------GCCKLENVPDTLGKVESLEELDVSGTA 158
            LK+L+ LNL                       G  +L  +P+ +G++++L  L+++   
Sbjct: 205 QLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQ 264

Query: 159 IRRPTSSIFLMKNLRSLY--FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-V 215
            +  +  I  +KNL++L   ++     P       +L    LG +       LP+  G +
Sbjct: 265 FKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTA---LPNEIGQL 321

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL------ 269
            +L  L L +  L   A+P++I  L  L+ELYL+ N   TLP  I  L NL+EL      
Sbjct: 322 QNLQSLYLGNNQL--TALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQ 379

Query: 270 ------ELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
                 E+   K LQ+L        ++R+N  ++L
Sbjct: 380 LTILPNEIGQLKNLQTL--------YLRSNRLTTL 406



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 6/275 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T +P+ I  L  L +L L   +   ++   I  LK L+TL L 
Sbjct: 226 VEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQ-FKTISKEIGQLKNLQTLNL- 283

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +++L  LYL    +  +P+ I  L  L+ LYL   + L  LP+ I 
Sbjct: 284 GYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQ-LTALPNEIG 342

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L LS   +L  +P+ +G++++L+EL +    +    + I  +KNL++LY    
Sbjct: 343 QLQKLQELYLS-TNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSN 401

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S           L   +  +      +  + +L  LDL    L    +P +I  L
Sbjct: 402 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQL--TTLPKEIGQL 459

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +L+   LN N   TLP  I  L NL+EL L D +
Sbjct: 460 KNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQ 494



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 33/221 (14%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS----- 131
           D+  L L       +P  I  L  L+ L LN+ + L  LP  I  LK+L+ LNL      
Sbjct: 47  DVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 132 -----------------GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
                            G  +L  +P+ +G++++L  L+++    +     I  +KNL++
Sbjct: 106 ILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQT 165

Query: 175 LYFSGCNE---PPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGE 230
           LY  G N+    P       +L F  LG +   +   LP   G + +L KL+L D     
Sbjct: 166 LYL-GNNQLTALPNEIGQIQNLQFLYLGSNRLTI---LPKEIGQLKNLRKLNLYDNQF-- 219

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
             +P +++ L +LKELYL  N   TLP  I  L NL  LEL
Sbjct: 220 TILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLEL 260



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 10/161 (6%)

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFSGCNE 182
           ++ LNLS   + + +P  +GK+++L+EL+++   +      I  +KNLR  +LY +    
Sbjct: 48  VRVLNLS-ANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTI 106

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLH 241
            P       +L    LG +       LP+  G + +L  L+L+        IP +I  L 
Sbjct: 107 LPKEVEKLENLKELYLGSNRLTT---LPNEIGQLKNLRVLELTHNQF--KTIPKEIGQLK 161

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +L+ LYL  N    LP  I  + NL+ L L    RL  LP+
Sbjct: 162 NLQTLYLGNNQLTALPNEIGQIQNLQFLYL-GSNRLTILPK 201


>gi|307135797|gb|ADN33676.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 556

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 93/170 (54%), Gaps = 5/170 (2%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           ++ T++  +  S+  L  L +L L GC NL  LP     L  L  L LS C  LKK P  
Sbjct: 344 INCTNLRMIDKSVFSLNKLNVLNLYGCSNLKKLPRGYFMLSSLNELNLSYCKNLKKIPDF 403

Query: 72  VASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            A+ + L   YL   S +  +  S+  L  LE L L +C NLV+LPS +  LKSL+ L+L
Sbjct: 404 SAAFKSL---YLQKCSNLRMIHESVGSLKKLEQLNLRQCTNLVKLPSYLR-LKSLEYLSL 459

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           SGCCKLE+ P     ++SL ELD+  TAI+   SSI  +  L  L  +GC
Sbjct: 460 SGCCKLESFPTIAENMKSLYELDLDFTAIKELPSSIGYLTKLSILKLNGC 509



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 2/134 (1%)

Query: 10  LYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           LYL   S +  +  S+  L  LE L L+ C NL  LP  +  LK L  L LSGC KL+ F
Sbjct: 410 LYLQKCSNLRMIHESVGSLKKLEQLNLRQCTNLVKLPSYLR-LKSLEYLSLSGCCKLESF 468

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           P I  +M+ L +L LD T+I E+PSSI  L  L +L LN C NL+ LP++I  L++L+ L
Sbjct: 469 PTIAENMKSLYELDLDFTAIKELPSSIGYLTKLSILKLNGCTNLISLPNTIYLLRNLENL 528

Query: 129 NLSGCCKLENVPDT 142
            LSGC      P T
Sbjct: 529 LLSGCSIFGMFPHT 542



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 1/124 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L   +++R +  ++  L  L QL L  C NL +LP  +  LK L  L+LSG  K   FP 
Sbjct: 412 LQKCSNLRMIHESVGSLKKLEQLNLRQCTNLVKLPSYLR-LKSLEYLSLSGCCKLESFPT 470

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           I  +   L E+ L+ TAI+ LP+SI  L+   +  L  C NL SLP+TI  LR+L  +  
Sbjct: 471 IAENMKSLYELDLDFTAIKELPSSIGYLTKLSILKLNGCTNLISLPNTIYLLRNLENLLL 530

Query: 784 SGCS 787
           SGCS
Sbjct: 531 SGCS 534



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 103/230 (44%), Gaps = 30/230 (13%)

Query: 54  LRTLELSGCSKLKKFPQIVAS--MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN 111
           L+ ++LS  + L+  P   A+  +E+L+   ++ T++  +  S+  L  L +L L  C N
Sbjct: 315 LKHVDLSYSTLLENIPDFSAASNLEELN--LINCTNLRMIDKSVFSLNKLNVLNLYGCSN 372

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L +LP     L SL  LNLS C  L+ +PD     +SL     S   +R    S+  +K 
Sbjct: 373 LKKLPRGYFMLSSLNELNLSYCKNLKKIPDFSAAFKSLYLQKCSN--LRMIHESVGSLKK 430

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA 231
           L  L    C               NL+          LPS   + SL  L LS C   E 
Sbjct: 431 LEQLNLRQCT--------------NLVK---------LPSYLRLKSLEYLSLSGCCKLE- 466

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           + P+  +N+ SL EL L+      LP+SI  L  L  L+L  C  L SLP
Sbjct: 467 SFPTIAENMKSLYELDLDFTAIKELPSSIGYLTKLSILKLNGCTNLISLP 516



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 43/68 (63%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +MK L +L LD T+I E+PSSI  LT L +L L GC NL SLP TI  L+ L  L LSGC
Sbjct: 474 NMKSLYELDLDFTAIKELPSSIGYLTKLSILKLNGCTNLISLPNTIYLLRNLENLLLSGC 533

Query: 63  SKLKKFPQ 70
           S    FP 
Sbjct: 534 SIFGMFPH 541



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 16/177 (9%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L + T++R +  ++  L  L  L L GC NL++LPR    L  L+ LNLS     ++ P+
Sbjct: 343 LINCTNLRMIDKSVFSLNKLNVLNLYGCSNLKKLPRGYFMLSSLNELNLSYCKNLKKIPD 402

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
            +++   L   +L+  + +R +  S+  L      NL+ C NL  LPS +  L+SL  + 
Sbjct: 403 FSAAFKSL---YLQKCSNLRMIHESVGSLKKLEQLNLRQCTNLVKLPSYLR-LKSLEYLS 458

Query: 783 PSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQ--SAVETVTKLAKAEL 837
            SGC KL++       ++SL          ++  DF  +++  S++  +TKL+  +L
Sbjct: 459 LSGCCKLESFPTIAENMKSLY---------ELDLDFTAIKELPSSIGYLTKLSILKL 506


>gi|297791255|ref|XP_002863512.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309347|gb|EFH39771.1| hypothetical protein ARALYDRAFT_356517 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 991

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 181/404 (44%), Gaps = 103/404 (25%)

Query: 10  LYLDG-TSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
           L L+G TS+ E+   I + +  L LL L+GC  L SLP    SL  L+ L LSGCSK +K
Sbjct: 531 LNLEGCTSLEELSGEILQNMKNLILLNLRGCTGLVSLPKI--SLCSLKILILSGCSKFQK 588

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           F Q+++  E+L  LYL+GT+I                         RLP S+  L+ L  
Sbjct: 589 F-QVIS--ENLETLYLNGTAID------------------------RLPPSVGNLQRLIL 621

Query: 128 LNLSGCCKLENVPD--TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
           L+L  C  LE + D   LG + SL+EL +SG +  +  S    ++NLR+L   G      
Sbjct: 622 LDLKDCKNLETLSDCTNLGNMRSLQELKLSGCS--KLKSFPKNIENLRNLLLEGT----- 674

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
                                          ++TK+            P +I+ +  L+ 
Sbjct: 675 -------------------------------AITKM------------PQNINGMSLLRR 691

Query: 246 LYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
           L L+R++ + TL  + + L +L+ LEL  CK L SL  +PPNLQF+ A+GC+SL T+   
Sbjct: 692 LCLSRSDEIYTLQFNTNELYHLKWLELMYCKNLTSLLGLPPNLQFLYAHGCTSLKTVSSP 751

Query: 305 LKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ 358
           L L        S +   NC   L+ + KN +          + ++ +  H  S      +
Sbjct: 752 LALLISTEQIHSTFIFTNC-HELEQVSKNDI----------MSSIQNTRHPTSYDQYNRE 800

Query: 359 IPK-WFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS 401
           +P+ W+  +  G ++ V      Y  ++  G  + C F+   H+
Sbjct: 801 LPRHWYEGRVNGLALCVAVSFNNYK-DQNNGLQVKCTFEFTDHA 843



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 9/149 (6%)

Query: 658 PDIVQVLSDG-TDIRELSLAI-ELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
           P+++++  +G T + ELS  I + +  L+ L L GC  L  LP+   +L  L  L LSG 
Sbjct: 526 PNLLRLNLEGCTSLEELSGEILQNMKNLILLNLRGCTGLVSLPKI--SLCSLKILILSGC 583

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTIN-- 773
           SKF++F  I+ + + L   +L GTAI  LP S+  L   IL +LKDCKNL++L    N  
Sbjct: 584 SKFQKFQVISENLETL---YLNGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDCTNLG 640

Query: 774 GLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +RSL+ +  SGCSKLK+  + +  + +L
Sbjct: 641 NMRSLQELKLSGCSKLKSFPKNIENLRNL 669



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 76/165 (46%), Gaps = 34/165 (20%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLP--RTISALKYLSTLNLSGLSKFREFPE 723
           +GT I  L  ++  L  L+ L L  CKNLE L     +  ++ L  L LSG SK + FP+
Sbjct: 602 NGTAIDRLPPSVGNLQRLILLDLKDCKNLETLSDCTNLGNMRSLQELKLSGCSKLKSFPK 661

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLS-------------------GNILSNLK---- 760
              +   LL   LEGTAI  +P +I  +S                    N L +LK    
Sbjct: 662 NIENLRNLL---LEGTAITKMPQNINGMSLLRRLCLSRSDEIYTLQFNTNELYHLKWLEL 718

Query: 761 -DCKNLKSLPSTINGL-RSLRMMYPSGCSKLKNVTETLGKVESLE 803
             CKNL SL     GL  +L+ +Y  GC+ LK V+  L  + S E
Sbjct: 719 MYCKNLTSLL----GLPPNLQFLYAHGCTSLKTVSSPLALLISTE 759


>gi|222619836|gb|EEE55968.1| hypothetical protein OsJ_04697 [Oryza sativa Japonica Group]
          Length = 1710

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 127/241 (52%), Gaps = 12/241 (4%)

Query: 11  YLD---GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
           YLD    +++ ++PSS+  L  L  L L GC  L  LP +I++LKCL+ L++SGC  L+K
Sbjct: 664 YLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQK 723

Query: 68  FPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            P    S+  LS + L   S + ++P S+  L  LE L L++C  L +LP  +  L  L+
Sbjct: 724 LPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYRLE 782

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L++S C +++ +P T  +++ L+ L++S     I+ P      +  L+SL  + C++  
Sbjct: 783 VLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLP-ECFGDLSELQSLNLTSCSK-L 840

Query: 185 ASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            S  W L   FNL  L  S C     LPS  G   L  LDL+ C      +P  I N+ S
Sbjct: 841 QSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLRLQVLDLTGC-YNMHGLPDSISNMSS 899

Query: 243 L 243
           L
Sbjct: 900 L 900



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 30/289 (10%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +++++  L L   S+  +P++I  L  L  L L    NL+ LP +++ L  L  L LSGC
Sbjct: 635 TLQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGC 694

Query: 63  SKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           +KL++ P+ + +++ L  L + G  ++ ++P     L  L  + L+ C  L +LP S+N 
Sbjct: 695 AKLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN- 753

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGC 180
           L+SL+ L LS C +LE +P+ LG +  LE LD+S     +     F  +K+L+ L  S C
Sbjct: 754 LESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDC 813

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
           +                         + LP   G +  L  L+L+ C   + ++P  + N
Sbjct: 814 HG-----------------------LIQLPECFGDLSELQSLNLTSCSKLQ-SLPWSLCN 849

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           + +LK L L+   +  +LP+S+ G L L+ L+L  C  +  LP    N+
Sbjct: 850 MFNLKHLNLSYCVSLESLPSSL-GDLRLQVLDLTGCYNMHGLPDSISNM 897



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 28/262 (10%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           LP +I  L  L  L++SG   +   P+   +++++  L L   S+  +P++I  L  L  
Sbjct: 606 LPSSIRRLMLLGYLDVSGFPIIS-LPKSFHTLQNMQSLILSNCSLEILPANIGSLQKLCY 664

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L L+   NL +LPSS+  L  L  LNLSGC KLE +P+++  ++ L+ LD+SG    +  
Sbjct: 665 LDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKL 724

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
              F   +L  L F                  NL   SSC     LP    + SL  L L
Sbjct: 725 PGKF--GSLAKLSF-----------------VNL---SSCSKLTKLPDSLNLESLEHLIL 762

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQ 282
           SDC   E  +P D+ NL+ L+ L ++    V  LP +   L +L+ L L DC  L  LP+
Sbjct: 763 SDCHELE-QLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPE 821

Query: 283 IPPN---LQFVRANGCSSLVTL 301
              +   LQ +    CS L +L
Sbjct: 822 CFGDLSELQSLNLTSCSKLQSL 843



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 2/144 (1%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   + ++P  +  L  LE+L +  C  +  LP T   LK L+ L LS C  L + P+  
Sbjct: 764 DCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPECF 823

Query: 73  ASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             + +L  L L   S +  +P S+  +  L+ L L+ C +L  LPSS+  L+ L+ L+L+
Sbjct: 824 GDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVLDLT 882

Query: 132 GCCKLENVPDTLGKVESLEELDVS 155
           GC  +  +PD++  + SL  L+ +
Sbjct: 883 GCYNMHGLPDSISNMSSLTLLNTA 906



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L L+   NL +LP +++ L  L  LNLSG +K  E PE  ++   L  + + G  A+
Sbjct: 662 LCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCAL 721

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP     L+     NL  C  L  LP ++N L SL  +  S C +L+ + E LG +  
Sbjct: 722 QKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYR 780

Query: 802 LEV 804
           LEV
Sbjct: 781 LEV 783



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  +++ +L  ++  L  L  L L+GC  LE LP +I+ LK L  L++SG    ++ P 
Sbjct: 667 LSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPG 726

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S  +L  ++L   + +  LP S+ L S   L  L DC  L+ LP  +  L  L ++ 
Sbjct: 727 KFGSLAKLSFVNLSSCSKLTKLPDSLNLESLEHLI-LSDCHELEQLPEDLGNLYRLEVLD 785

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            S C +++ + +T  +++ L+
Sbjct: 786 MSDCYRVQVLPKTFCQLKHLK 806



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 2/141 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LSD  ++ +L   +  L+ L  L ++ C  ++ LP+T   LK+L  LNLS      + P
Sbjct: 761 ILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLP 820

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
           E      +L  ++L   + ++ LP S+  +      NL  C +L+SLPS++  LR L+++
Sbjct: 821 ECFGDLSELQSLNLTSCSKLQSLPWSLCNMFNLKHLNLSYCVSLESLPSSLGDLR-LQVL 879

Query: 782 YPSGCSKLKNVTETLGKVESL 802
             +GC  +  + +++  + SL
Sbjct: 880 DLTGCYNMHGLPDSISNMSSL 900



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 686 LTLNGCKNLER-------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L L+G  N E+       LP +I  L  L  L++SG       P+   +   +  + L  
Sbjct: 588 LDLSGLSNEEQSTPSNPVLPSSIRRLMLLGYLDVSGFPII-SLPKSFHTLQNMQSLILSN 646

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            ++  LPA+I  L      +L    NL  LPS++  L  L  +  SGC+KL+ + E++  
Sbjct: 647 CSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINN 706

Query: 799 VESLE 803
           ++ L+
Sbjct: 707 LKCLQ 711


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 145/308 (47%), Gaps = 49/308 (15%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L+ LYL G  I  +P+    +T L  L L G   L+ +P  + SL  L  L  S
Sbjct: 91  LAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGL-GNSGLAEIPELVFSLTNLTYLGFS 149

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + L+  P+ ++++++L KL L G S++++P SI LL  LE LY+ E K L  +P +I 
Sbjct: 150 E-NNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENK-LTEIPQAIG 207

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL +LNL G  ++  +P  +GK+ SL  L +    I     +I    NL SL     
Sbjct: 208 KLTSLTSLNL-GENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAI---GNLTSL----- 258

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE---------- 230
                            LG SS  +A++  ++  + SLT LDLS   + E          
Sbjct: 259 ---------------TALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTS 303

Query: 231 -----------AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
                      A +P  I NL SL  L+L RN    LP +I  L +L  L L +  ++  
Sbjct: 304 LTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSN-NQIAE 362

Query: 280 LPQIPPNL 287
           LPQ   NL
Sbjct: 363 LPQTIGNL 370



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 149/310 (48%), Gaps = 34/310 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++  L+ L L    I E+P +I  LT L  L+L+  + ++ LP TI +L  L  L L 
Sbjct: 275 IGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQ-IAELPQTIGNLTSLTNLFL- 332

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +K+ + PQ + ++  L+ LYL    IAE+P +I  L  L  L L+    +  LP +I 
Sbjct: 333 GRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLS-FNQIAELPQTIG 391

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS--LYFS 178
            L SL +LNL    ++  +P T+G + SL  L +S   I     +I  + +L S  L+ +
Sbjct: 392 NLTSLTSLNLYN-NQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSN 450

Query: 179 GCNEPPASAS-----WHLHLPFNLLGK----------------SSCPVALMLPSLTGVCS 217
              E P +         L L FN + +                S   +A +L ++  + S
Sbjct: 451 QIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTS 510

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L+ LDLS+  + E  +P  I NL SL +L L  N    +P     L NLE+L+L    R 
Sbjct: 511 LSDLDLSNNQIAE--LPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDL----RG 564

Query: 278 QSLPQIPPNL 287
             +P IPP +
Sbjct: 565 NPVP-IPPEI 573



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLA-------IELLFGLVQLTLNGC--KNLER 696
           N ++L+   ++   +    S+ T + EL L         EL+F L  LT  G    NL+ 
Sbjct: 96  NLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQV 155

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           LP +IS LK L  L+L G +   + PE  +   +L E+++    +  +P +I  L+    
Sbjct: 156 LPESISNLKNLKKLSLGG-NSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTS 214

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            NL + + +  LP  I  L SL  +     +++  + E +G + SL
Sbjct: 215 LNLGENQ-IAELPQMIGKLTSLTSL-KLWSNQIAIIPEAIGNLTSL 258


>gi|357471111|ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355506895|gb|AES88037.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1264

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 207/522 (39%), Gaps = 124/522 (23%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            +  V +SI  L  L  L L  CKNL SL ++ + L  LR LEL GCS LK+F     + E
Sbjct: 666  LRHVHASILSLQKLVNLNLVWCKNLKSL-LSNTPLNSLRILELYGCSSLKEFS---VTSE 721

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            +++ L L  T+I E                        LP S+  L  L  L LS C +L
Sbjct: 722  EMTYLDLRCTAINE------------------------LPPSVKYLGRLMNLELSSCVRL 757

Query: 137  ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
             N+P+    ++SL  L +S   +   ++   L   LRSL +                   
Sbjct: 758  RNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGY------------------- 798

Query: 197  LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
                           L   C+LT+L            P +I  L SL  L L+ +N   +
Sbjct: 799  -------------LCLDNCCNLTEL------------PHNISLLSSLYYLSLSGSNVKNI 833

Query: 257  PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA------LKLCRS 310
            P SI  L  LE L+L  C  +Q LP++PP+++ +    C+SL T+F        L+  + 
Sbjct: 834  PKSIKHLSQLESLDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTCPAIDELLQEHKV 893

Query: 311  KYTIINCIDSLKLLRKNGLAISM---LRE-------------------YLELQAVSDPGH 348
              +  NC++ L    +NG+ +     L+E                   + + +A S   H
Sbjct: 894  FISFKNCVE-LNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFFFKSEATSSYHH 952

Query: 349  KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF--QVPKHSTGTYL 406
              +++ PGS++P WF Y++  +SIT+         + + GF  C +    +P      + 
Sbjct: 953  PPTVICPGSRVPDWFHYRSTEASITIELSVSHSPQSNIFGFIFCLILPQSLPNEKNLNWK 1012

Query: 407  FHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLF-----------LPRHGHNWQ 455
                     EC M+G               +VSDH++L +             +   N  
Sbjct: 1013 IGC------ECYMEGGENIRNTSMCSFATGLVSDHVYLWYDENFCFDMFNTTGKSRTNDD 1066

Query: 456  FESNLIRLSFRSISDPTWK----VKRCGFHPIYMHEVEEFDE 493
            + +   +LSF+   +   K    +K CG   IY  E   F E
Sbjct: 1067 YSAYKPKLSFQFFVETEDKMNVVIKECGICQIYGSEYLSFVE 1108



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS    +R +  +I  L  LV L L  CKNL+ L    + L  L  L L G S  +EF  
Sbjct: 660 LSRCVRLRHVHASILSLQKLVNLNLVWCKNLKSLLSN-TPLNSLRILELYGCSSLKEFS- 717

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +TS  +++  + L  TAI  LP S++ L   +   L  C  L++LP+  + L+SL  +  
Sbjct: 718 VTS--EEMTYLDLRCTAINELPPSVKYLGRLMNLELSSCVRLRNLPNEFSCLKSLGRLVL 775

Query: 784 SGCSKL 789
           S C+ L
Sbjct: 776 SDCTLL 781



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 25/151 (16%)

Query: 660 IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR 719
           +V++    + ++ L   ++ L  L ++ L+ C+NL  LP   S    L T+NLS   + R
Sbjct: 609 LVELYMPNSRVKRLWEGVQDLTNLKKMDLSCCENLIELP-DFSMASNLQTVNLSRCVRLR 667

Query: 720 EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
                         +H          ASI  L   +  NL  CKNLKSL S    L SLR
Sbjct: 668 H-------------VH----------ASILSLQKLVNLNLVWCKNLKSLLSN-TPLNSLR 703

Query: 780 MMYPSGCSKLKNVTETLGKVESLEVRLSSWN 810
           ++   GCS LK  + T  ++  L++R ++ N
Sbjct: 704 ILELYGCSSLKEFSVTSEEMTYLDLRCTAIN 734


>gi|110741708|dbj|BAE98800.1| hypothetical protein [Arabidopsis thaliana]
          Length = 574

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 181/410 (44%), Gaps = 75/410 (18%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           DG  I ++P  +E    L +L  +   N    P      + L  L +   SKL+   Q  
Sbjct: 176 DGNDIMDIPKRMEFPRRLRILKWEAYPN-KCFPPKFHP-EYLVELVMKN-SKLEYLWQGT 232

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             +++L ++ L G+S  +   ++     +E+L L++CK+LV +PSS + L+ L+ L L G
Sbjct: 233 QPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSDCKSLVEIPSSFSHLQRLEKLRLRG 292

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS------ 186
           C  LE +P  +  +E L +LD+ G +  R   +I +M     LYF   +E          
Sbjct: 293 CISLEVIPADMN-LEFLYDLDMRGCSRLR---NIPVMST--RLYFLNISETAVEDVSASI 346

Query: 187 ASWH--LHLPFNLLGKSSCPVALMLPSLTGVCSLTK----LDLSDCGLGEAAIPSDIDNL 240
            SWH   HL  N   K           L G+  L +    LDLS  G+    IP+ I + 
Sbjct: 347 TSWHHVTHLSINSSAK-----------LRGLTHLPRPVEFLDLSYSGI--ERIPNCIKDR 393

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
           + LK L            +ISG           C+RL SLP++P +L+F+ A+ C SL T
Sbjct: 394 YLLKSL------------TISG-----------CRRLTSLPELPASLKFLVADDCESLET 430

Query: 301 LFGALKLCRS-KYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           +F   K  +   + I    +  KL ++   AI           +  P    + + PG ++
Sbjct: 431 VFCPFKTSKCWPFNIFEFTNCFKLDQEARRAI-----------IQRPFFHGTTLLPGREV 479

Query: 360 PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
           P  F ++  G+++T+  P       + VGF   CV   P H   T  FHS
Sbjct: 480 PAEFDHRGRGNTLTI--PLERKRSYRGVGF---CVVISPNHQI-TEKFHS 523


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 144/290 (49%), Gaps = 16/290 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L +    + E+P  I  LT L+ L L GC  +  LP  I  L  L++L+L 
Sbjct: 72  IGQLHQLEELQIALNQLQELPPEILQLTSLQSLNL-GCNKIQELPPEIGQLTSLQSLDLR 130

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +K+++ P  +  +  L  L L G +I E+P  I  L  L+ L L+   N+  LP  I 
Sbjct: 131 -YNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIF 189

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY--FS 178
            L SL++L+LS   K++ +P  + ++ SL+ L +S   I+   + I  + +L+SL+  F+
Sbjct: 190 QLTSLQSLHLS-FNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFN 248

Query: 179 GCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
              E PA     L L     L   S  +  + P +  + SL  L+L    + E  +P +I
Sbjct: 249 KIQELPAEI---LQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQE--LPPEI 303

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
             L SL+ L L  NN   LP  I  L NL++L+L    R   LP IPP +
Sbjct: 304 LQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDL----RSNPLP-IPPEI 348



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 3/142 (2%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++EL   I  L  L  L L GC  ++ LP  I  L  L +L+L   +K +E P       
Sbjct: 88  LQELPPEILQLTSLQSLNL-GCNKIQELPPEIGQLTSLQSLDLR-YNKIQELPPEIGQLT 145

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L  ++L G  I+ LP  I  L+     +L    N++ LP  I  L SL+ ++ S  +K+
Sbjct: 146 SLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLS-FNKI 204

Query: 790 KNVTETLGKVESLEVRLSSWNR 811
           + +   + ++ SL+    S+N+
Sbjct: 205 QELPAEILQLTSLQSLHLSFNK 226



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           I+EL   I  L  L  L L+G  N++ LP  I  L  L +L+LS  +  +E P       
Sbjct: 134 IQELPPEIGQLTSLQSLNLSG-NNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLT 192

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN-LKSLPSTINGLRSLRMMYPSGCSK 788
            L  +HL    I+ LPA I  L+   L +L    N ++ LP+ I  L SL+ ++ S  +K
Sbjct: 193 SLQSLHLSFNKIQELPAEILQLTS--LQSLHLSFNKIQELPAEILQLTSLQSLHLS-FNK 249

Query: 789 LKNVTETLGKVESLE 803
           ++ +   + ++ SL+
Sbjct: 250 IQELPAEILQLTSLQ 264


>gi|359495272|ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 197/456 (43%), Gaps = 88/456 (19%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           LR L   G S LK  P+   S + L +L +  + I ++   I++L  L+ + L+  K L+
Sbjct: 591 LRYLYWHGYS-LKSLPKDF-SPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYLI 648

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNL 172
           + P   +G+ +L+ L L GC  L  V  +LG ++ L  L +   T +RR  SS   +K+L
Sbjct: 649 QTPD-FSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKSL 707

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
            +   SGC++           P N           ML  L     +  LDLS C + + A
Sbjct: 708 ETFILSGCSKFE-------EFPENFGNLE------MLKELHA-DGIVNLDLSYCNISDGA 753

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
             S +  L SL+ L L+ NNFVTLP ++SGL +LE L L +CKRL++L Q+P +++ + A
Sbjct: 754 NVSGLGFLVSLEWLNLSGNNFVTLP-NMSGLSHLETLRLGNCKRLEALSQLPSSIRSLNA 812

Query: 293 NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI 352
             C+SL T      L  +K       DS                               +
Sbjct: 813 KNCTSLGTTELLNLLLTTK-------DS----------------------------TFGV 837

Query: 353 VFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVF--QVP------------ 398
           V PGS+IP W  YQ+  + I    P  L      +GFA+  VF  + P            
Sbjct: 838 VIPGSRIPDWIRYQSSRNVIEADLP--LNWSTNCLGFALALVFGGRFPVAYDDWFWARVF 895

Query: 399 -KHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFE 457
               T    F +  +  +E S+   G                DH+ L F P        +
Sbjct: 896 LDFGTCRRSFETGISFPMENSVFAEG----------------DHVVLTFAPVQPSLSPHQ 939

Query: 458 SNLIRLSFRSISDPT-WKVKRCGFHPIYMHEVEEFD 492
              I+ +F  +S P  +++KRCG   +Y++E   F+
Sbjct: 940 VIHIKATFAIMSVPNYYEIKRCGLGLMYVNEEVNFN 975



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 113/241 (46%), Gaps = 22/241 (9%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           DL  LY  G S+  +P        +EL       ++  L   I  L+ L++++LS    L
Sbjct: 590 DLRYLYWHGYSLKSLPKDFSPKHLVELSM--PYSHIKKLWKGIKVLERLKSIDLSHSKYL 647

Query: 66  KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            + P   + + +L +L L+G  ++ +V  S+ +L  L  L L  C  L RLPSS   LKS
Sbjct: 648 IQTPDF-SGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKS 706

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEP 183
           L+T  LSGC K E  P+  G +E L+EL   G   +     +I    N+  L F      
Sbjct: 707 LETFILSGCSKFEEFPENFGNLEMLKELHADGIVNLDLSYCNISDGANVSGLGF------ 760

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA--AIPSDIDNLH 241
             S  W      NL G +     + LP+++G+  L  L L +C   EA   +PS I +L+
Sbjct: 761 LVSLEW-----LNLSGNN----FVTLPNMSGLSHLETLRLGNCKRLEALSQLPSSIRSLN 811

Query: 242 S 242
           +
Sbjct: 812 A 812



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 28/138 (20%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA----- 740
           L+L  C  L RLP +  +LK L T  LSG SKF EFPE   + + L E+H +G       
Sbjct: 686 LSLKNCTMLRRLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELHADGIVNLDLS 745

Query: 741 ---------IRGLPASIEL----LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                    + GL   + L    LSGN         N  +LP+ ++GL  L  +    C 
Sbjct: 746 YCNISDGANVSGLGFLVSLEWLNLSGN---------NFVTLPN-MSGLSHLETLRLGNCK 795

Query: 788 KLKNVTETLGKVESLEVR 805
           +L+ +++    + SL  +
Sbjct: 796 RLEALSQLPSSIRSLNAK 813


>gi|357486935|ref|XP_003613755.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515090|gb|AES96713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 790

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 139/317 (43%), Gaps = 73/317 (23%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M+  ++L  L+LD   ++ EV  S+  L  LE L L  C +L  LP  I+ L  L+T+  
Sbjct: 405 MSGAQNLKKLHLDSFKNLVEVHDSVGFLGKLEDLNLNRCTSLRVLPHGIN-LPSLKTMSF 463

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             C+ LK FP+I+  ME+ + L L  T I+E+P SI LL GL  L ++ CK L+ LPSSI
Sbjct: 464 RNCASLKSFPEILGKMENTTYLGLSDTGISELPFSIGLLEGLATLTIDRCKELLELPSSI 523

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L  L+TL    C  L  +    G+V                              +SG
Sbjct: 524 FMLPKLETLEAYSCKDLARIKKCKGQVH--------------------------ETMYSG 557

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                        + FN    S   +A +LP L  V +L+ LD     +    +PS I+ 
Sbjct: 558 AKSV---------VDFNFCHLSDEFLATLLPCLHYVRNLS-LDY----IIITILPSCINE 603

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
            HSLKEL  N                       +C  L+ +  +PPN++ + A  C+SL 
Sbjct: 604 CHSLKELTFN-----------------------NCMELREIRGLPPNIKHISAINCTSLT 640

Query: 300 TLFGALKLCRSKYTIIN 316
           +        +SK T++N
Sbjct: 641 S--------QSKDTLLN 649



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 1/129 (0%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  ++  L  L  L LN C +L  LP  I+ L  L T++    +  + FPEI    +  
Sbjct: 424 EVHDSVGFLGKLEDLNLNRCTSLRVLPHGIN-LPSLKTMSFRNCASLKSFPEILGKMENT 482

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
             + L  T I  LP SI LL G     +  CK L  LPS+I  L  L  +    C  L  
Sbjct: 483 TYLGLSDTGISELPFSIGLLEGLATLTIDRCKELLELPSSIFMLPKLETLEAYSCKDLAR 542

Query: 792 VTETLGKVE 800
           + +  G+V 
Sbjct: 543 IKKCKGQVH 551



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 59/223 (26%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSD--GTDIRELSLAIELLFGLVQLTLN 689
           GR+ VR +SP +PG  SRLW     + DI+ V  +  G+D  E+ +   +    VQ   N
Sbjct: 265 GREIVRLESPAKPGERSRLW----FYKDILNVFKENKGSDKTEIIMLHLVKDKEVQWDGN 320

Query: 690 GCKNLE-----------------RLPRTISALKY----------------LSTLNL---- 712
             K +E                  LP+++  LK+                L  L+L    
Sbjct: 321 ALKKMENLKILVIEKARFSIGPNHLPKSLRVLKWRDYPESSLPVHFDPKKLVILDLSMSC 380

Query: 713 ----------SGLSKFREF---PEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSN 758
                     S +SK+ +    P+++ +++ L ++HL+    +  +  S+  L      N
Sbjct: 381 ITFNNQVIIVSMVSKYVDIYLVPDMSGAQN-LKKLHLDSFKNLVEVHDSVGFLGKLEDLN 439

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           L  C +L+ LP  IN L SL+ M    C+ LK+  E LGK+E+
Sbjct: 440 LNRCTSLRVLPHGIN-LPSLKTMSFRNCASLKSFPEILGKMEN 481



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 34/169 (20%)

Query: 646 NCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           NC+ L      FP+I+  + +        T I EL  +I LL GL  LT++ CK L  LP
Sbjct: 465 NCASL----KSFPEILGKMENTTYLGLSDTGISELPFSIGLLEGLATLTIDRCKELLELP 520

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL----LSGN 754
            +I  L  L TL        ++   I   + Q+ E     T   G  + ++     LS  
Sbjct: 521 SSIFMLPKLETLEAYSC---KDLARIKKCKGQVHE-----TMYSGAKSVVDFNFCHLSDE 572

Query: 755 ILSNLKDC----KNLK-------SLPSTINGLRSLRMMYPSGCSKLKNV 792
            L+ L  C    +NL         LPS IN   SL+ +  + C +L+ +
Sbjct: 573 FLATLLPCLHYVRNLSLDYIIITILPSCINECHSLKELTFNNCMELREI 621


>gi|21655195|gb|AAM28912.1| NBS/LRR [Pinus taeda]
          Length = 363

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 139/298 (46%), Gaps = 23/298 (7%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + ++P  +  L  ++ + ++ C  L  LP    +L  L+ + +SGC  L++ P    ++ 
Sbjct: 67  LKQLPDDLGNLANMQXIDMRQCWGLKQLPDVFGNLANLQHIXMSGCXGLEQLPDGFGNLA 126

Query: 77  DLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           +L  +++     + ++P     L  L+ ++++ C  L +LP     L +L+ +++S C +
Sbjct: 127 NLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCWALKQLPDGFGNLANLQHIDMSDCSE 186

Query: 136 LENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGC----NEPPASAS-- 188
           L+ +PD  G + +L+ +++SG   + + T+    + NL+ +  S C      P    +  
Sbjct: 187 LKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSDCWGLKQLPDGFGNLA 246

Query: 189 --WHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
              H+H+       S C     LP   G + +L  +D+S C  G   +P    NL +L+ 
Sbjct: 247 NLQHIHM-------SHCSGLKQLPDGFGNLANLQHIDMSKC-RGLEQLPDGFGNLANLQH 298

Query: 246 LYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGCSSLV 299
           + ++       LP     L NL+ + +  C  L+ LP       NLQ +  +GCS  +
Sbjct: 299 INMSHCPGLKQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHIDMSGCSGFL 356



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 56/301 (18%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSK------------------------LKKFPQIVA 73
           C+ L  LP    +L   + + +S C                          LK+ P +  
Sbjct: 40  CEELEQLPDAFGNLANXQHINMSRCWXLKQLPDDLGNLANMQXIDMRQCWGLKQLPDVFG 99

Query: 74  SMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
           ++ +L  + + G   + ++P     L  L+ ++++ C  L +LP     L +L+ +++S 
Sbjct: 100 NLANLQHIXMSGCXGLEQLPDGFGNLANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSH 159

Query: 133 CCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
           C  L+ +PD  G + +L+ +D+S  + +++       + NL+ +  SGC        W L
Sbjct: 160 CWALKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGC--------WRL 211

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR- 250
               N  G               + +L  +D+SDC  G   +P    NL +L+ ++++  
Sbjct: 212 EQLTNGFGN--------------LANLQHIDMSDC-WGLKQLPDGFGNLANLQHIHMSHC 256

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGCSSLVTL---FGA 304
           +    LP     L NL+ +++  C+ L+ LP       NLQ +  + C  L  L   FG 
Sbjct: 257 SGLKQLPDGFGNLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGN 316

Query: 305 L 305
           L
Sbjct: 317 L 317



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 2/170 (1%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D + + ++P     L  L+ + + GC  L  L     +L  L+ +++S C  LK+ P   
Sbjct: 183 DCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSDCWGLKQLPDGF 242

Query: 73  ASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            ++ +L  +++   S + ++P     L  L+ + +++C+ L +LP     L +L+ +N+S
Sbjct: 243 GNLANLQHIHMSHCSGLKQLPDGFGNLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMS 302

Query: 132 GCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGC 180
            C  L+ +PD  G + +L+ +++S    +++       + NL+ +  SGC
Sbjct: 303 HCPGLKQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHIDMSGC 352



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 83/167 (49%), Gaps = 2/167 (1%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++ ++P     L  L+ + +  C  L  LP    +L  L+ + +SGC +L++      ++
Sbjct: 162 ALKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNL 221

Query: 76  EDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            +L  + + D   + ++P     L  L+ ++++ C  L +LP     L +L+ +++S C 
Sbjct: 222 ANLQHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCSGLKQLPDGFGNLANLQHIDMSKCR 281

Query: 135 KLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGC 180
            LE +PD  G + +L+ +++S    +++       + NL+ +  S C
Sbjct: 282 GLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHINMSHC 328



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 10/167 (5%)

Query: 646 NCSRLWEEADEFPDIVQVLSD--GTDIRELSLAIEL--LFG----LVQLTLNGCKNLERL 697
           N SR W    + PD +  L++    D+R+     +L  +FG    L  + ++GC  LE+L
Sbjct: 60  NMSRCWX-LKQLPDDLGNLANMQXIDMRQCWGLKQLPDVFGNLANLQHIXMSGCXGLEQL 118

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNIL 756
           P     L  L  +++S   + ++ P+   +   L  IH+    A++ LP     L+    
Sbjct: 119 PDGFGNLANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCWALKQLPDGFGNLANLQH 178

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            ++ DC  LK LP     L +L+ +  SGC +L+ +T   G + +L+
Sbjct: 179 IDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQ 225



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 5/163 (3%)

Query: 646 NCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           +C  L +  D F ++  +    +SD +++++L      L  L  + ++GC  LE+L    
Sbjct: 159 HCWALKQLPDGFGNLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGF 218

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK 760
             L  L  +++S     ++ P+   +   L  IH+   + ++ LP     L+     ++ 
Sbjct: 219 GNLANLQHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCSGLKQLPDGFGNLANLQHIDMS 278

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            C+ L+ LP     L +L+ +  S C  LK + +  G + +L+
Sbjct: 279 KCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQ 321



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 9/165 (5%)

Query: 646 NCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           +CS L +  D+F ++  +    +S    + +L+     L  L  + ++ C  L++LP   
Sbjct: 183 DCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSDCWGLKQLPDGF 242

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL---PASIELLSGNILSN 758
             L  L  +++S  S  ++ P+   +   L   H++ +  RGL   P     L+     N
Sbjct: 243 GNLANLQHIHMSHCSGLKQLPDGFGNLANL--QHIDMSKCRGLEQLPDGFGNLANLQHIN 300

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           +  C  LK LP     L +L+ +  S C  LK + +  G + +L+
Sbjct: 301 MSHCPGLKQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQ 345



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           C  L +  D F ++  +    +S    +++L      L  L  + ++ C  L++LP    
Sbjct: 112 CXGLEQLPDGFGNLANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCWALKQLPDGFG 171

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKD 761
            L  L  +++S  S+ ++ P+   +   L  I++ G   +  L      L+     ++ D
Sbjct: 172 NLANLQHIDMSDCSELKKLPDDFGNLANLQHINMSGCWRLEQLTNGFGNLANLQHIDMSD 231

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           C  LK LP     L +L+ ++ S CS LK + +  G + +L+
Sbjct: 232 CWGLKQLPDGFGNLANLQHIHMSHCSGLKQLPDGFGNLANLQ 273



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 21/175 (12%)

Query: 630 KWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLN 689
           +W RQ+    +      C    EE ++ PD    L++   I                 ++
Sbjct: 23  RWXRQSSTSATHXHVXAC----EELEQLPDAFGNLANXQHI----------------NMS 62

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASI 748
            C  L++LP  +  L  +  +++      ++ P++  +   L  I + G   +  LP   
Sbjct: 63  RCWXLKQLPDDLGNLANMQXIDMRQCWGLKQLPDVFGNLANLQHIXMSGCXGLEQLPDGF 122

Query: 749 ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             L+     ++  C  LK LP     L +L+ ++ S C  LK + +  G + +L+
Sbjct: 123 GNLANLQHIHMSRCWRLKQLPDGFGNLANLQHIHMSHCWALKQLPDGFGNLANLQ 177



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 5/146 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           C RL +  + F ++  +    +SD   +++L      L  L  + ++ C  L++LP    
Sbjct: 208 CWRLEQLTNGFGNLANLQHIDMSDCWGLKQLPDGFGNLANLQHIHMSHCSGLKQLPDGFG 267

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKD 761
            L  L  +++S      + P+   +   L  I++     ++ LP     L+     N+  
Sbjct: 268 NLANLQHIDMSKCRGLEQLPDGFGNLANLQHINMSHCPGLKQLPDGFGNLANLQHINMSH 327

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCS 787
           C  LK LP     L +L+ +  SGCS
Sbjct: 328 CPGLKQLPDGFGNLANLQHIDMSGCS 353


>gi|168041854|ref|XP_001773405.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675281|gb|EDQ61778.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 895

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 133/306 (43%), Gaps = 52/306 (16%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLT-GLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M  M+ L  L L  + IT + +     T  L+ L L  CK L  LP +I+  K LR L L
Sbjct: 624 MYDMRKLVVLDLASSKITHLWNVDSTATVWLQTLILDDCKELRELPDSINGSKDLRNLHL 683

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CS L+  P+ +  +  L  L L G T +  +P ++  L  L  LYL +C NLV +P S
Sbjct: 684 EKCSSLESLPETIGDLSKLEVLRLRGCTKLKHLPEALGSLTNLWSLYLTDCTNLVSIPES 743

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I   ++L  L+L  C  LE +P++ GK                       + NLR+    
Sbjct: 744 IGNCRNLSNLSLGRCYNLEAIPESTGK-----------------------LCNLRTF--- 777

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
              E P                 SC      P L     + K     CG     +PS I 
Sbjct: 778 ---ESP-----------------SCDKISHFPELMKDLFVLKTLKVGCG-SLTTLPSFIS 816

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGC 295
           +L  L+EL L  + FVTLP++I  L  L++L+L  C  L+SLP+     Q +R     GC
Sbjct: 817 HLTGLQELSLCLSRFVTLPSAICALTRLQDLKLIGCDVLESLPENMGAFQELRILSLVGC 876

Query: 296 SSLVTL 301
            SL  L
Sbjct: 877 VSLKRL 882



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 24/176 (13%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + S+ +L  LYL D T++  +P SI     L  L+L  C NL ++P +   L  LRT E 
Sbjct: 720 LGSLTNLWSLYLTDCTNLVSIPESIGNCRNLSNLSLGRCYNLEAIPESTGKLCNLRTFES 779

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELL--------------- 104
             C K+  FP+++  +  L  L +   S+  +PS I  L GL+ L               
Sbjct: 780 PSCDKISHFPELMKDLFVLKTLKVGCGSLTTLPSFISHLTGLQELSLCLSRFVTLPSAIC 839

Query: 105 --------YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
                    L  C  L  LP ++   + L+ L+L GC  L+ +PD++G+++ LEEL
Sbjct: 840 ALTRLQDLKLIGCDVLESLPENMGAFQELRILSLVGCVSLKRLPDSVGELKYLEEL 895



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +L D  ++REL  +I     L  L L  C +LE LP TI  L  L  L L G +K +  P
Sbjct: 658 ILDDCKELRELPDSINGSKDLRNLHLEKCSSLESLPETIGDLSKLEVLRLRGCTKLKHLP 717

Query: 723 EITSSRDQLLEIHL-EGTAIRGLPASIELLSGNI--LSNLK--DCKNLKSLPSTINGLRS 777
           E   S   L  ++L + T +  +P SI    GN   LSNL    C NL+++P +   L +
Sbjct: 718 EALGSLTNLWSLYLTDCTNLVSIPESI----GNCRNLSNLSLGRCYNLEAIPESTGKLCN 773

Query: 778 LRMMYPSGCSKLKNVTETL 796
           LR      C K+ +  E +
Sbjct: 774 LRTFESPSCDKISHFPELM 792



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L L+ CK L  LP +I+  K L  L+L   S     PE      +L  + L G T +
Sbjct: 654 LQTLILDDCKELRELPDSINGSKDLRNLHLEKCSSLESLPETIGDLSKLEVLRLRGCTKL 713

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           + LP ++  L+      L DC NL S+P +I   R+L  +    C  L+ + E+ GK+
Sbjct: 714 KHLPEALGSLTNLWSLYLTDCTNLVSIPESIGNCRNLSNLSLGRCYNLEAIPESTGKL 771



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK 760
           +A  +L TL L    + RE P+  +    L  +HLE  +++  LP +I  LS   +  L+
Sbjct: 649 TATVWLQTLILDDCKELRELPDSINGSKDLRNLHLEKCSSLESLPETIGDLSKLEVLRLR 708

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            C  LK LP  +  L +L  +Y + C+ L ++ E++G   +L
Sbjct: 709 GCTKLKHLPEALGSLTNLWSLYLTDCTNLVSIPESIGNCRNL 750



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 635 TVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL 694
           T  +  P+  G+ + LW            L+D T++  +  +I     L  L+L  C NL
Sbjct: 711 TKLKHLPEALGSLTNLWS---------LYLTDCTNLVSIPESIGNCRNLSNLSLGRCYNL 761

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGN 754
           E +P +   L  L T       K   FPE+      L  + +   ++  LP+ I  L+G 
Sbjct: 762 EAIPESTGKLCNLRTFESPSCDKISHFPELMKDLFVLKTLKVGCGSLTTLPSFISHLTG- 820

Query: 755 ILSNLKDC-KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            L  L  C     +LPS I  L  L+ +   GC  L+++ E +G  + L +
Sbjct: 821 -LQELSLCLSRFVTLPSAICALTRLQDLKLIGCDVLESLPENMGAFQELRI 870



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           L DCK L+ LP +ING + LR ++   CS L+++ ET+G +  LEV
Sbjct: 659 LDDCKELRELPDSINGSKDLRNLHLEKCSSLESLPETIGDLSKLEV 704



 Score = 43.9 bits (102), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 3/111 (2%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL--EGTAIRGLPASIELL 751
           LE++P  +  ++ L  L+L+  SK      + S+    L+  +  +   +R LP SI   
Sbjct: 617 LEKIPCEMYDMRKLVVLDLAS-SKITHLWNVDSTATVWLQTLILDDCKELRELPDSINGS 675

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                 +L+ C +L+SLP TI  L  L ++   GC+KLK++ E LG + +L
Sbjct: 676 KDLRNLHLEKCSSLESLPETIGDLSKLEVLRLRGCTKLKHLPEALGSLTNL 726


>gi|13517468|gb|AAK28805.1|AF310960_1 resistance-like protein P2-A [Linum usitatissimum]
          Length = 1196

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 216/505 (42%), Gaps = 87/505 (17%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISS--LKCLR--TLELSGCSKLKKFPQ 70
             S+ EVP  ++ LT L  L +  CKNL  LP  + S  LK +R   LE++ C      P+
Sbjct: 710  VSLVEVPFHVQYLTKLVTLDINYCKNLKRLPPKLDSKLLKHVRMKNLEVTCC------PE 763

Query: 71   IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            I +   +L +  L GTS+ E+PS+I  +    +L L+  KN+ + P     LK  K L+L
Sbjct: 764  IDS--RELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG-KNITKFPGITTILKRFK-LSL 819

Query: 131  SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
            SG               S+ E+D++    +  TS   L+    +L  +G  +     +  
Sbjct: 820  SGT--------------SIREIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSI 865

Query: 191  LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             ++    L   S P+   LP ++  + +LT L +  C     +IP+ I NL SL  L L 
Sbjct: 866  WNMISEELFICSSPLIESLPEISEPMSTLTSLHVF-CCRSLTSIPTSISNLRSLISLCLV 924

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQ------------------------SLPQIPP 285
                 +LP+SI  L  L  ++L DCK L+                        SLP++PP
Sbjct: 925  ETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPP 984

Query: 286  NLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD 345
            NL+ +  +GC SL  L      C+  Y      D    L +  +    +  +L + A   
Sbjct: 985  NLKTLNVSGCKSLQAL--PSNTCKLLYLNTIHFDGCPQLDQ-AIPGEFVANFL-VHASLS 1040

Query: 346  PGHKLSIVFPGSQIPKWFMYQN----EGSSITVTRPSYLYNVNK----VVGFAICCVFQV 397
            P ++  +   GS++PKWF Y++    + S++ V  P  L N +     + G A  CV+  
Sbjct: 1041 PSYERQVRCSGSELPKWFSYRSMEDEDCSTVKVELP--LANDSPDHPMIKGIAFGCVY-- 1096

Query: 398  PKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHV--VSDHLWLLFLPRHGHNWQ 455
               S  +Y + +       C +  +    ++      GH    S+ +WL+F   H +   
Sbjct: 1097 ---SCDSYYWMNMGC---RCEVGNTTVASWVSTEILMGHEENSSEKVWLVF---HKNLSG 1147

Query: 456  FESNLIRLSFRSISDPTWKVKRCGF 480
             E      S  S  D  W VK  GF
Sbjct: 1148 TE------SMGSEEDEAWYVKYGGF 1166



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 10/176 (5%)

Query: 9    DLYLDGTSITEV-PSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKL 65
            +L L G    EV P+SI  +   EL     C +  + SLP     +  L +L +  C  L
Sbjct: 849  NLSLTGNRQLEVLPNSIWNMISEELFI---CSSPLIESLPEISEPMSTLTSLHVFCCRSL 905

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
               P  ++++  L  L L  T I  +PSSI+ L  L  + L +CK+L  +P+SI+ L  L
Sbjct: 906  TSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKL 965

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
             TL++SGC  + ++P+      +L+ L+VSG  +++   S+   +  L +++F GC
Sbjct: 966  VTLSMSGCEIIISLPEL---PPNLKTLNVSGCKSLQALPSNTCKLLYLNTIHFDGC 1018



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 26/139 (18%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +++++ L  L L  T I  +PSSI+ L  L  + L+ CK+L S+P +I  L  L TL +S
Sbjct: 912  ISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMS 971

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            GC  +   P                          EL P L+ L ++ CK+L  LPS+  
Sbjct: 972  GCEIIISLP--------------------------ELPPNLKTLNVSGCKSLQALPSNTC 1005

Query: 121  GLKSLKTLNLSGCCKLENV 139
             L  L T++  GC +L+  
Sbjct: 1006 KLLYLNTIHFDGCPQLDQA 1024



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 39/188 (20%)

Query: 656 EFPDIVQVLS------DGTDIRELSLAIE----------LLFGLVQLTLNGCKNLERLPR 699
           +FP I  +L        GT IRE+ LA            LL     L+L G + LE LP 
Sbjct: 804 KFPGITTILKRFKLSLSGTSIREIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPN 863

Query: 700 TI-----------------------SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           +I                         +  L++L++         P   S+   L+ + L
Sbjct: 864 SIWNMISEELFICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCL 923

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
             T I+ LP+SI+ L      +L+DCK+L+S+P++I+ L  L  +  SGC  + ++ E  
Sbjct: 924 VETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELP 983

Query: 797 GKVESLEV 804
             +++L V
Sbjct: 984 PNLKTLNV 991



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 22/264 (8%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS- 63
            ++L +  L GTS+ E+PS+I  +    +L L G KN++  P   + LK  + L LSG S 
Sbjct: 767  RELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG-KNITKFPGITTILKRFK-LSLSGTSI 824

Query: 64   ---KLKKFPQIVASMEDL-----SKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVR 114
                L  + Q   + + L       L L G    EV P+SI  +   E L++     +  
Sbjct: 825  REIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSIWNMIS-EELFICSSPLIES 883

Query: 115  LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
            LP     + +L +L++  C  L ++P ++  + SL  L +  T I+   SSI  ++ L S
Sbjct: 884  LPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFS 943

Query: 175  LYFSGCNE-PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
            +    C        S H       L  S C + + LP L    +L  L++S C     A+
Sbjct: 944  IDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPP--NLKTLNVSGCK-SLQAL 1000

Query: 234  PSDIDNLHSLKELYLNRNNFVTLP 257
            PS+     + K LYLN  +F   P
Sbjct: 1001 PSN-----TCKLLYLNTIHFDGCP 1019



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 26/122 (21%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I+ L  +I+ L  L  + L  CK+LE +P +I  L  L TL++SG       PE    
Sbjct: 926  TGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPE---- 981

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                            LP +++ L      N+  CK+L++LPS    L  L  ++  GC 
Sbjct: 982  ----------------LPPNLKTL------NVSGCKSLQALPSNTCKLLYLNTIHFDGCP 1019

Query: 788  KL 789
            +L
Sbjct: 1020 QL 1021



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISA--LKYLSTLNLSGLSKFREFPEITSSRD 729
           E+   ++ L  LV L +N CKNL+RLP  + +  LK++   NL    +    PEI S   
Sbjct: 714 EVPFHVQYLTKLVTLDINYCKNLKRLPPKLDSKLLKHVRMKNL----EVTCCPEIDSR-- 767

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           +L E  L GT++  LP++I  +  N +  L   KN+   P     L+  ++
Sbjct: 768 ELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG-KNITKFPGITTILKRFKL 817


>gi|297734779|emb|CBI17013.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 3/140 (2%)

Query: 19  EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
           E  S   L  GL   +L  CKNL SLP  I  L+ L TL+L+ CS L+ FP+I+  M++L
Sbjct: 5   EESSKQHLWVGLLFFSLCFCKNLRSLPSNICRLESLTTLDLNHCSNLETFPEIMEDMQEL 64

Query: 79  SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
             L L GT+I E+PSS++ +  L  L L+ CKNL  LP +I  L+ L  L   GC KL+ 
Sbjct: 65  KNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKK 124

Query: 139 VPDTLGKVE---SLEELDVS 155
            P  +G ++   SLE LD+S
Sbjct: 125 FPRNMGNLKGLRSLENLDLS 144



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 100/208 (48%), Gaps = 28/208 (13%)

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
           GL    L  CKNL  LPS+I  L+SL TL+L+ C  LE  P+ +  ++ L+ LD+ GTAI
Sbjct: 15  GLLFFSLCFCKNLRSLPSNICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAI 74

Query: 160 RRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL-LGKSSCPVALMLP----SLTG 214
           +   SS+  +K LR L  S C            L F + L    CP     P    +L G
Sbjct: 75  KELPSSVQRIKRLRYLDLSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGNLKG 134

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           + SL  LDLS C   E AI SDI   + L+EL ++                        C
Sbjct: 135 LRSLENLDLSYCDGMEGAIFSDIGQFYKLRELNISH-----------------------C 171

Query: 275 KRLQSLPQIPPNLQFVRANGCSSLVTLF 302
           K LQ +P+ P  L+ + A+ C++L TLF
Sbjct: 172 KLLQEIPEFPSTLREIDAHDCTALETLF 199



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 69/124 (55%)

Query: 679 LLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L  GL+  +L  CKNL  LP  I  L+ L+TL+L+  S    FPEI     +L  + L G
Sbjct: 12  LWVGLLFFSLCFCKNLRSLPSNICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRG 71

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           TAI+ LP+S++ +      +L +CKNL++LP TI  L  L  +   GC KLK     +G 
Sbjct: 72  TAIKELPSSVQRIKRLRYLDLSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGN 131

Query: 799 VESL 802
           ++ L
Sbjct: 132 LKGL 135



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 10/145 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M  M++L +L L GT+I E+PSS++ +  L  L L  CKNL +LP TI  L+ L  L   
Sbjct: 58  MEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNLETLPHTIYDLEFLVDLTAH 117

Query: 61  GCSKLKKFPQIVA------SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           GC KLKKFP+ +       S+E+L   Y DG   A + S I     L  L ++ CK L  
Sbjct: 118 GCPKLKKFPRNMGNLKGLRSLENLDLSYCDGMEGA-IFSDIGQFYKLRELNISHCKLLQE 176

Query: 115 LPSSINGLKSLKTLNLSGCCKLENV 139
           +P   +   +L+ ++   C  LE +
Sbjct: 177 IPEFPS---TLREIDAHDCTALETL 198



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 646 NCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           +CS L    + FP+I++ + +       GT I+EL  +++ +  L  L L+ CKNLE LP
Sbjct: 47  HCSNL----ETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLRYLDLSNCKNLETLP 102

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI-HLEGTAIRGLPASIELLSGNILS 757
            TI  L++L  L   G  K ++FP    +   L  + +L+ +   G+  +I    G    
Sbjct: 103 HTIYDLEFLVDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLSYCDGMEGAIFSDIGQFYK 162

Query: 758 ----NLKDCKNLKSLPSTINGLRSL 778
               N+  CK L+ +P   + LR +
Sbjct: 163 LRELNISHCKLLQEIPEFPSTLREI 187


>gi|449486541|ref|XP_004157327.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1248

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 148/316 (46%), Gaps = 57/316 (18%)

Query: 27   LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL--------KKFPQIVA----- 73
            L  L +L L+GCKNL  LP+  + L+ L  L L+ C KL        +KFP  +      
Sbjct: 753  LDKLIILDLEGCKNLERLPIYTNKLESLELLNLASCLKLETFFDSSFRKFPSHLKFKSLK 812

Query: 74   --------SMEDLSKLYLDGT----------SIAEVPSSIELLPGLELLYLNECKNLVRL 115
                    ++E+++   +             S+  +  SI  L  L  L L+ C NL +L
Sbjct: 813  VLNLRDCLNLEEITDFSMASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDLCHNLEKL 872

Query: 116  PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
            PSS+  LKSL +L+ + C KLE +P+    ++SL  ++++GTAIR   SSI  +  L +L
Sbjct: 873  PSSLK-LKSLDSLSFTNCYKLEQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENL 931

Query: 176  YFSGC---NEPPASASW-----HLHLPFNLLGKSSCPVALMLPSLTGV--------CSLT 219
              + C      P    W      LHL         C    M P  + +          LT
Sbjct: 932  NLNDCANLTALPNEIHWLKSLEELHL-------RGCSKLDMFPPRSSLNFSQESSYFKLT 984

Query: 220  KLDLSDCGLGEAAIPSDIDNL-HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
             LDL +C +  +     + N+  SL++L L+ N F  LP S+    +L  LEL +CK LQ
Sbjct: 985  VLDLKNCNISNSDFLETLSNVCTSLEKLNLSGNTFSCLP-SLQNFKSLRFLELRNCKFLQ 1043

Query: 279  SLPQIPPNLQFVRANG 294
            ++ ++P +L  V A+G
Sbjct: 1044 NIIKLPHHLARVNASG 1059



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 136/311 (43%), Gaps = 49/311 (15%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
           LE L L+GC +L  +  +++SL  L TL+L GC  L+KFP     ++ L  L L     I
Sbjct: 660 LEKLYLRGCTSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKI 719

Query: 89  AEVPSSIELLPGLELLYLNE-------------------------CKNLVRLPSSINGLK 123
            E+P  +     L+ LYL E                         CKNL RLP   N L+
Sbjct: 720 EEIP-DLSASSNLKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPIYTNKLE 778

Query: 124 SLKTLNLSGCCKLENVPDTLG-------KVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           SL+ LNL+ C KLE   D+         K +SL+ L++         +   +  NL  L 
Sbjct: 779 SLELLNLASCLKLETFFDSSFRKFPSHLKFKSLKVLNLRDCLNLEEITDFSMASNLEILD 838

Query: 177 FSGC------NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
            + C      +E   S    + L  +L     C     LPS   + SL  L  ++C   E
Sbjct: 839 LNTCFSLRIIHESIGSLDKLITLQLDL-----CHNLEKLPSSLKLKSLDSLSFTNCYKLE 893

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNL 287
             +P   +N+ SL+ + LN      LP+SI  L+ LE L L DC  L +LP       +L
Sbjct: 894 -QLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSL 952

Query: 288 QFVRANGCSSL 298
           + +   GCS L
Sbjct: 953 EELHLRGCSKL 963



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R +  +I  L  L+ L L+ C NLE+LP ++  LK L +L+ +   K  + PE   +  
Sbjct: 845 LRIIHESIGSLDKLITLQLDLCHNLEKLPSSLK-LKSLDSLSFTNCYKLEQLPEFDENMK 903

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L  ++L GTAIR LP+SI  L G    NL DC NL +LP+ I+ L+SL  ++  GCSKL
Sbjct: 904 SLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKL 963



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 3/130 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ +  ++  L  LV L L GC NLE+ P +   LK L  LNLS   K  E P++++S
Sbjct: 669 TSLKVIHESVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSAS 728

Query: 728 RDQLLEIHL-EGTAIRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            + L E++L E   +R +  SI   L   I+ +L+ CKNL+ LP   N L SL ++  + 
Sbjct: 729 SN-LKELYLRECDRLRIIHDSIGRSLDKLIILDLEGCKNLERLPIYTNKLESLELLNLAS 787

Query: 786 CSKLKNVTET 795
           C KL+   ++
Sbjct: 788 CLKLETFFDS 797



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 19/164 (11%)

Query: 646  NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
            NC +L E+  EF + ++ L     +GT IR L  +I  L GL  L LN C NL  LP  I
Sbjct: 888  NCYKL-EQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALPNEI 946

Query: 702  SALKYLSTLNLSGLSKFREFPEIT-------SSRDQLLEIHLEGTAIRGLPASIELLSGN 754
              LK L  L+L G SK   FP  +       SS  +L  + L+   I      +E LS N
Sbjct: 947  HWLKSLEELHLRGCSKLDMFPPRSSLNFSQESSYFKLTVLDLKNCNISN-SDFLETLS-N 1004

Query: 755  ILSNLKDC----KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
            + ++L+           LPS  N  +SLR +    C  L+N+ +
Sbjct: 1005 VCTSLEKLNLSGNTFSCLPSLQN-FKSLRFLELRNCKFLQNIIK 1047



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 32/153 (20%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGL--------SKFREFP--------EITS 726
           L+ L L GCKNLERLP   + L+ L  LNL+          S FR+FP        ++ +
Sbjct: 756 LIILDLEGCKNLERLPIYTNKLESLELLNLASCLKLETFFDSSFRKFPSHLKFKSLKVLN 815

Query: 727 SRDQL-------------LEIHLEGT--AIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
            RD L             LEI    T  ++R +  SI  L   I   L  C NL+ LPS+
Sbjct: 816 LRDCLNLEEITDFSMASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDLCHNLEKLPSS 875

Query: 772 INGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +  L+SL  +  + C KL+ + E    ++SL V
Sbjct: 876 LK-LKSLDSLSFTNCYKLEQLPEFDENMKSLRV 907


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 139/285 (48%), Gaps = 13/285 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             ++  L+ LYL    +  +P +   LT L  L L   + +++LP +I +L  L +L+LS
Sbjct: 58  FGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNNNQ-INALPESIGNLTSLTSLDLS 116

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+   ++  L+ L L+   +  +P S+  L  L+ LYLN  + L  LP S  
Sbjct: 117 -ANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQ-LKALPDSAG 174

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L SL  L+LS   +L  +P+  G + SL  L +SG  I     SI  + NLR LY   +
Sbjct: 175 NLTSLTFLDLSEN-QLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNN 233

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
             N  P S     +L    L ++       LP   G + SLT L LS   L   A+P   
Sbjct: 234 QLNTLPESIVNLTNLTDLYLSENQLNA---LPETFGNLSSLTDLYLSGNQLN--ALPETF 288

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            NL SL  LYLN N    LP SI  L  L+EL L D K L +LPQ
Sbjct: 289 GNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLL-TLPQ 332



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 33/283 (11%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           + L LSG   L + P  + ++  L+ LYL+   ++ +P +   L  L  LYL+    L  
Sbjct: 19  KELNLSGMD-LSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLS-ANQLNA 76

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP +   L SL+ L L+   ++  +P+++G + SL  LD+S   +     +     NL S
Sbjct: 77  LPEAFGNLTSLRYLKLNN-NQINALPESIGNLTSLTSLDLSANQLNALPEA---FGNLTS 132

Query: 175 LYFSGCNEPP----------ASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDL 223
           L F   N  P           ++  HL+L  N L          LP   G + SLT LDL
Sbjct: 133 LTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLK--------ALPDSAGNLTSLTFLDL 184

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
           S+  L   A+P    NL SL  LYL+ N    LP SI  L NL  L L +  +L +LP+ 
Sbjct: 185 SENQLN--ALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWN-NQLNTLPES 241

Query: 284 PPNLQ-----FVRANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
             NL      ++  N  ++L   FG L      Y   N +++L
Sbjct: 242 IVNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNAL 284


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 137/276 (49%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T  P  I  L  L+ L L     + ++P  I  L+ L++L L 
Sbjct: 112 IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-SANQIKTIPKEIEKLQKLQSLYLP 170

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  LYL    I  +P  IE L  L+ LYL++ + L  LP  I 
Sbjct: 171 N-NQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQ-LTTLPQEIE 228

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L+ L++L L    +L  +P  +G++++L+ L ++   +      I  ++NL+ LY   +
Sbjct: 229 KLQKLESLGLDNN-QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 287

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +   +   LP   G + +L +L LS+  L    IP +I
Sbjct: 288 QLTTIPKEIGQLQNLQMLDLGNNQLTI---LPKEIGKLQNLQELYLSNNQL--TTIPKEI 342

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L +L+ELYL+ N   T+P  I  L NL+EL L +
Sbjct: 343 GQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN 378



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 35/266 (13%)

Query: 82  YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
           Y D T   + P  + +L       L+E K L  LP  I  LK+L+ L+LS   +L  +P 
Sbjct: 36  YQDLTKALQNPLDVRVLD------LSEQK-LKALPKKIGQLKNLQMLDLSDN-QLIILPK 87

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPASASWH----LHLP 194
            + ++++L+ LD+    +      I  ++NL+ LY S       P           L+L 
Sbjct: 88  EIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLS 147

Query: 195 FNLLGKSSCPV-------ALMLPS--LTG----VCSLTKLDLSDCGLGE-AAIPSDIDNL 240
            N +      +       +L LP+  LT     +  L KL        +   +P +I+ L
Sbjct: 148 ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKL 207

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGC 295
             L+ LYL++N   TLP  I  L  LE L L D  +L +LPQ    LQ     F+  N  
Sbjct: 208 QKLQWLYLHKNQLTTLPQEIEKLQKLESLGL-DNNQLTTLPQEIGQLQNLKVLFLNNNQL 266

Query: 296 SSLVTLFGALKLCRSKYTIINCIDSL 321
           +++    G L+  +  Y + N + ++
Sbjct: 267 TTIPQEIGHLQNLQDLYLVSNQLTTI 292


>gi|255555357|ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542096|gb|EEF43640.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 186/400 (46%), Gaps = 76/400 (19%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D  ++ EV SSI+ L  LE L L  C  L  LP  I S K L+ L+L G +++K+ P+  
Sbjct: 681  DCDNLEEVHSSIQYLNKLEFLNLWHCNKLRRLPRRIDS-KVLKVLKL-GSTRVKRCPEFQ 738

Query: 73   ASMEDLSKLYLDGTSIAEVPSSI-ELLPGLEL--LYLNECKNLVRLPSSINGLKSLKTLN 129
             +   L  ++L   +I  V  ++  +L    L  L++  C+ L  LPSS   LKSLK+L+
Sbjct: 739  GNQ--LEDVFLYCPAIKNVTLTVLSILNSSRLVHLFVYRCRRLSILPSSFYKLKSLKSLD 796

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            L  C KLE+ P+ L  + ++ ++D+S              +NL+S         P S S 
Sbjct: 797  LLHCSKLESFPEILEPMYNIFKIDMS------------YCRNLKSF--------PNSISN 836

Query: 190  HLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
             + L + NL G +   +  M  S+  +  L  LDL DC                    YL
Sbjct: 837  LISLTYLNLAGTA---IKQMPSSIEHLSQLDFLDLKDCK-------------------YL 874

Query: 249  NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL--VTLFGALK 306
            +     +LP SI  L  LEE+ L  C+ L SLP++P +L+ +RA  C SL  VT +  L 
Sbjct: 875  D-----SLPVSIRELPQLEEMYLTSCESLHSLPELPSSLKKLRAENCKSLERVTSYKNL- 928

Query: 307  LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK-LSIVFPGSQIPKWFMY 365
                + T  NC+     L +    I+ LR       V +  +K   +++PGS++P  F  
Sbjct: 929  ---GEATFANCLR----LDQKSFQITDLR-------VPECIYKERYLLYPGSEVPGCFSS 974

Query: 366  QNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY 405
            Q+ GSS+T+       N       A C VF+  K S   +
Sbjct: 975  QSMGSSVTMQSS---LNEKLFKDAAFCVVFEFKKSSDCVF 1011



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
           C  LE  P  +  +  +  +++S     + FP   S+   L  ++L GTAI+ +P+SIE 
Sbjct: 800 CSKLESFPEILEPMYNIFKIDMSYCRNLKSFPNSISNLISLTYLNLAGTAIKQMPSSIEH 859

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           LS     +LKDCK L SLP +I  L  L  MY + C  L ++ E
Sbjct: 860 LSQLDFLDLKDCKYLDSLPVSIRELPQLEEMYLTSCESLHSLPE 903



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 50/78 (64%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++++  L+ L L GT+I ++PSSIE L+ L+ L LK CK L SLPV+I  L  L  + L+
Sbjct: 834 ISNLISLTYLNLAGTAIKQMPSSIEHLSQLDFLDLKDCKYLDSLPVSIRELPQLEEMYLT 893

Query: 61  GCSKLKKFPQIVASMEDL 78
            C  L   P++ +S++ L
Sbjct: 894 SCESLHSLPELPSSLKKL 911


>gi|357449875|ref|XP_003595214.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355484262|gb|AES65465.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1362

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 187/420 (44%), Gaps = 59/420 (14%)

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
             P LE L L  C+ LV L  SI  L+ L  LNL  C  L ++P+ +  + SLE L++   
Sbjct: 648  FPNLEWLNLEGCERLVELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNM--- 704

Query: 158  AIRRPTSSIFLMKNLRSLYFSGCNE--PPASAS----WHLHLPFNLLGKSSCPVALMLPS 211
               R    +F   N R L   G +E  P   ++     H+ LP +L   +  P    L S
Sbjct: 705  ---RCCFKVF--TNSRHLTTPGISESVPRVRSTSGVFKHVMLPHHLPFLAP-PTNTYLHS 758

Query: 212  LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L     L ++D+S C L +  +P  I+ LH ++ L L  N+F TLP S+  L  L  L L
Sbjct: 759  LY---CLREVDISFCRLSQ--VPDTIECLHWVERLNLGGNDFATLP-SLRKLSKLVYLNL 812

Query: 272  EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYT-----IINCIDSLKLLRK 326
            + CK L+SLPQ+P               T  G  ++    Y      I NC    +    
Sbjct: 813  QHCKLLESLPQLP-------------FPTAIGRERVEGGYYRPTGLFIFNCPKLGERECY 859

Query: 327  NGLAISMLREYLELQAVSDPGH--KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVN 384
            + +  S + ++++    ++P +  ++ IV PGS+IP W   ++ G SI + + S + + N
Sbjct: 860  SSMTFSWMMQFIK----ANPFYLNRIHIVSPGSEIPSWINNKSVGDSIRIDQ-SPIKHDN 914

Query: 385  KVVGFAICCVFQVPKH------STGTYLFHSYPAHELEC--SMDGSGEGHYIYFRGKFGH 436
             ++GF  C VF +  H      S    L   YP ++ +   S+        +   G    
Sbjct: 915  NIIGFVCCAVFSMAPHRGRFPSSAHMELVLKYPFNKRKSDKSLSRITVSVPVILNGSLVT 974

Query: 437  VV--SDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
            +   S H+W+++     ++   E   IR           +VK CG+  +   +++EF+ T
Sbjct: 975  ITTKSSHIWIIYFHCESYHAFRE---IRFEIFEGQALGMEVKSCGYRWVCKQDLQEFNLT 1031



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 15/114 (13%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSK------FREFPEITSSRDQLLEIHL 736
           LV+L L+G  N++ L +    L  L  L+LS   K      F EFP        L  ++L
Sbjct: 605 LVELILDG-SNIKNLWKNKKYLPNLRRLDLSDSRKLEKIMDFGEFP-------NLEWLNL 656

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           EG   +  L  SI LL   +  NLKDC NL S+P+ I  L SL  +    C K+
Sbjct: 657 EGCERLVELDPSIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRCCFKV 710


>gi|224150150|ref|XP_002336911.1| predicted protein [Populus trichocarpa]
 gi|222837116|gb|EEE75495.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 147/311 (47%), Gaps = 31/311 (9%)

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
           C +L  LP SI  +KSL+TLN+SGC +LE +P+ +G +ESL EL   G    +  SSI  
Sbjct: 2   CWSLKTLPESIGNVKSLETLNISGCSQLEKLPERMGDMESLTELLADGIENEQFLSSIGQ 61

Query: 169 MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           +K++R L        P S+S    +   +L     P      S     S+ +L+LS+ GL
Sbjct: 62  LKHVRRLSLCRNRSAPPSSSL---ISAGVLNWKRWPPT----SFIEWISVKRLELSNGGL 114

Query: 229 GEAAIPS-DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            + A    D   L +L+ L L+ N F +LP+ +  L  L  L ++ CK L S+P +P +L
Sbjct: 115 SDRATNCVDFRGLSALEHLDLDGNKFSSLPSGLGFLPKLRWLSVQACKYLVSIPDLPSSL 174

Query: 288 QFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK-NGLAISMLREYLELQAVSDP 346
            F+ A  C SL  +    +  +  Y  +    SL+ ++   GL+ S    Y+ +   ++ 
Sbjct: 175 DFLFAAHCKSLKRVRIPSEPKKELYIGLENSHSLEEIQGIEGLSNSFW--YIRVDKHNNS 232

Query: 347 GHKLS----------------IVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFA 390
            +KL                    PG ++P W  Y  EG  ++   P     +  VV F 
Sbjct: 233 PNKLPKNVIEAFCNGCYRYFIYCLPG-KMPNWMSYSGEGCPLSFHIPPVFQGL--VVWF- 288

Query: 391 ICCVFQVPKHS 401
           +C + +V +HS
Sbjct: 289 VCSLEKVHRHS 299



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 23/164 (14%)

Query: 37  GCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
           GC +L +LP +I ++K L TL +SGCS+L+K P+ +  ME L++L  DG    +  SSI 
Sbjct: 1   GCWSLKTLPESIGNVKSLETLNISGCSQLEKLPERMGDMESLTELLADGIENEQFLSSIG 60

Query: 97  LLPGLELLYLNECKNLVRLPSS-------INGLK----------SLKTLNLSGCC---KL 136
            L  +  L L  C+N    PSS       +N  +          S+K L LS      + 
Sbjct: 61  QLKHVRRLSL--CRNRSAPPSSSLISAGVLNWKRWPPTSFIEWISVKRLELSNGGLSDRA 118

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            N  D  G + +LE LD+ G       S +  +  LR L    C
Sbjct: 119 TNCVDFRG-LSALEHLDLDGNKFSSLPSGLGFLPKLRWLSVQAC 161



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 107/269 (39%), Gaps = 57/269 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP--------------- 45
           M  M+ L++L  DG    +  SSI  L  +  L+L  C+N S+ P               
Sbjct: 36  MGDMESLTELLADGIENEQFLSSIGQLKHVRRLSL--CRNRSAPPSSSLISAGVLNWKRW 93

Query: 46  --VTISSLKCLRTLELSGCSKLKKFPQIV--ASMEDLSKLYLDGTSIAEVPSSIELLPGL 101
              +      ++ LELS      +    V    +  L  L LDG   + +PS +  LP L
Sbjct: 94  PPTSFIEWISVKRLELSNGGLSDRATNCVDFRGLSALEHLDLDGNKFSSLPSGLGFLPKL 153

Query: 102 ELLYLNECKNLVR---LPSSINGL-----KSLKTLNLSGCCK------LENVPDTLGKVE 147
             L +  CK LV    LPSS++ L     KSLK + +    K      LEN   +L +++
Sbjct: 154 RWLSVQACKYLVSIPDLPSSLDFLFAAHCKSLKRVRIPSEPKKELYIGLENS-HSLEEIQ 212

Query: 148 SLEELDVSGTAIR---RPTSSIFLMKNLRSLYFSGCNE------PPASASWHLHLPFNLL 198
            +E L  S   IR      S   L KN+   + +GC        P    +W  +      
Sbjct: 213 GIEGLSNSFWYIRVDKHNNSPNKLPKNVIEAFCNGCYRYFIYCLPGKMPNWMSY------ 266

Query: 199 GKSSCPVALMLPSLTG------VCSLTKL 221
               CP++  +P +        VCSL K+
Sbjct: 267 SGEGCPLSFHIPPVFQGLVVWFVCSLEKV 295



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           GC +L+ LP +I  +K L TLN+SG S+  + PE     + L E+  +G       +SI 
Sbjct: 1   GCWSLKTLPESIGNVKSLETLNISGCSQLEKLPERMGDMESLTELLADGIENEQFLSSIG 60

Query: 750 LLSGNILSNLKDCKNLKSLPST 771
            L    +  L  C+N  + PS+
Sbjct: 61  QLKH--VRRLSLCRNRSAPPSS 80



 Score = 39.3 bits (90), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 29/41 (70%)

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           C +LK+LP +I  ++SL  +  SGCS+L+ + E +G +ESL
Sbjct: 2   CWSLKTLPESIGNVKSLETLNISGCSQLEKLPERMGDMESL 42


>gi|168057243|ref|XP_001780625.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667893|gb|EDQ54511.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 277

 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 137/277 (49%), Gaps = 33/277 (11%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEV 91
           L +  C  L +LP ++ +L  L  L ++ C  LK  PQ + +   L KL L G  S+  +
Sbjct: 12  LNVAECVYLEALPESMGNLNSLVVLYVNECGSLKALPQSIGNSNSLVKLNLYGCGSLKAL 71

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
           P  +  L  L  L L  C  L  LP S+  L SL  LNL+GC  LE +P ++G + SL E
Sbjct: 72  PEGMGNLNSLVELNLYGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVE 131

Query: 152 LDVS--GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           LD+S  G+    P S    M NL SL                 +  NL G   C     L
Sbjct: 132 LDLSSCGSLKALPKS----MGNLNSL-----------------VELNLNG---CVYLEAL 167

Query: 210 P-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLE 267
           P S+  + SL +LDLS CG    A+P  +DNL+SL EL LN   ++  LP S+  L +L 
Sbjct: 168 PKSMGNLNSLVELDLSSCG-SLKALPKSMDNLNSLVELNLNGCVYLEALPKSMGNLNSLV 226

Query: 268 ELELEDCKRLQSLPQIPPNLQ-FVRAN--GCSSLVTL 301
           EL L  C  L++LP+   NL   V+ +  GC SL  L
Sbjct: 227 ELNLNGCVYLEALPKSMGNLNCLVQLDLRGCKSLEAL 263



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 140/297 (47%), Gaps = 53/297 (17%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M ++  L  LY++   S+  +P SI     L  L L GC +L +LP  + +L  L  L L
Sbjct: 27  MGNLNSLVVLYVNECGSLKALPQSIGNSNSLVKLNLYGCGSLKALPEGMGNLNSLVELNL 86

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAE-VPSSIELLPGLELLYLNECKNLVRLPSS 118
            GC  L+  P+ + ++  L +L L+G    E +P S+  L  L  L L+ C +L  LP S
Sbjct: 87  YGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSLKALPKS 146

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLY 176
           +  L SL  LNL+GC  LE +P ++G + SL ELD+S  G+    P S    M NL    
Sbjct: 147 MGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSLKALPKS----MDNLN--- 199

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
                                                   SL +L+L+ C   E A+P  
Sbjct: 200 ----------------------------------------SLVELNLNGCVYLE-ALPKS 218

Query: 237 IDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           + NL+SL EL LN   ++  LP S+  L  L +L+L  CK L++LP+   NL+ ++ 
Sbjct: 219 MGNLNSLVELNLNGCVYLEALPKSMGNLNCLVQLDLRGCKSLEALPKSIGNLKNLKV 275



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 6/147 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-I 741
           LV+L LNGC  LE LP+++  L  L  L+LS     +  P+   + + L+E++L G   +
Sbjct: 105 LVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSLKALPKSMGNLNSLVELNLNGCVYL 164

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP S+  L+  +  +L  C +LK+LP +++ L SL  +  +GC  L+ + +++G + S
Sbjct: 165 EALPKSMGNLNSLVELDLSSCGSLKALPKSMDNLNSLVELNLNGCVYLEALPKSMGNLNS 224

Query: 802 L-EVRLSSW----NRPKMQNDFDCVEQ 823
           L E+ L+        PK   + +C+ Q
Sbjct: 225 LVELNLNGCVYLEALPKSMGNLNCLVQ 251



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 1/142 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS    ++ L  ++  L  LV+L LNGC  LE LP+++  L  L  L+LS     +  P+
Sbjct: 134 LSSCGSLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSLKALPK 193

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              + + L+E++L G   +  LP S+  L+  +  NL  C  L++LP ++  L  L  + 
Sbjct: 194 SMDNLNSLVELNLNGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNCLVQLD 253

Query: 783 PSGCSKLKNVTETLGKVESLEV 804
             GC  L+ + +++G +++L+V
Sbjct: 254 LRGCKSLEALPKSIGNLKNLKV 275



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 2/133 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-I 741
           LV+L L GC +L+ LP  +  L  L  LNL G       P+   + + L+E++L G   +
Sbjct: 57  LVKLNLYGCGSLKALPEGMGNLNSLVELNLYGCVYLEALPKSMGNLNSLVELNLNGCVYL 116

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP S+  L+  +  +L  C +LK+LP ++  L SL  +  +GC  L+ + +++G + S
Sbjct: 117 EALPKSMGNLNSLVELDLSSCGSLKALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNS 176

Query: 802 L-EVRLSSWNRPK 813
           L E+ LSS    K
Sbjct: 177 LVELDLSSCGSLK 189



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           LV+L L GC  LE LP+++  L  L  LNL+G       P+   + + L+E+ L    ++
Sbjct: 81  LVELNLYGCVYLEALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSL 140

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP S+  L+  +  NL  C  L++LP ++  L SL  +  S C  LK + +++  + S
Sbjct: 141 KALPKSMGNLNSLVELNLNGCVYLEALPKSMGNLNSLVELDLSSCGSLKALPKSMDNLNS 200

Query: 802 L 802
           L
Sbjct: 201 L 201


>gi|108738504|gb|ABG00785.1| disease resistance protein [Arabidopsis thaliana]
          Length = 558

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 145/302 (48%), Gaps = 21/302 (6%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS++++P SI  L  L+ L + G   +  LP+  SSL  L       C  LK+ P  +  
Sbjct: 228 TSLSKIPDSINELKSLKKLFING-SAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGR 286

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           +  L +L L  T I  +P  I  L  +  L L  CK L  LP SI  + +L +LNL G  
Sbjct: 287 LNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEG-S 345

Query: 135 KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF--SGCNEPPASAS--- 188
            +E +P+  GK+E L EL +S    ++R   S   +K+L  LY   +  +E P S     
Sbjct: 346 NIEELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLS 405

Query: 189 -----WHLHLPF------NLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSD 236
                  L  P       N+ G S  P  + +P S + +  L +LD     +    IP D
Sbjct: 406 NLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDD 464

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           ++ L  L +L L  N F +LP+S+  L NL+EL L DC+ L+ LP +P  L+ +    C 
Sbjct: 465 LEKLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCF 524

Query: 297 SL 298
           SL
Sbjct: 525 SL 526



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 128/300 (42%), Gaps = 42/300 (14%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG-- 132
           M  L +L LDGT+I  +P SI  L  LE L L                            
Sbjct: 147 MTXLKELLLDGTAIKNLPXSIXRLQNLEXLSLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 206

Query: 133 --------------------CCKLENVPDTLGKVESLEELDVSGTAIR----RPTSSIFL 168
                               C  L  +PD++ +++SL++L ++G+A+     +P+S    
Sbjct: 207 XXXXXXXXXXXXXXXXXXXRCTSLSKIPDSINELKSLKKLFINGSAVEELPLKPSS---- 262

Query: 169 MKNLRSLY-FSGCN-----EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              L SLY FS  +     + P+S      L    L  +  P+  +   +  +  + +L+
Sbjct: 263 ---LPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSST--PIEALPEEIGALHFIRELE 317

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L +C   +  +P  I ++ +L  L L  +N   LP     L  L EL + +CK L+ LP+
Sbjct: 318 LRNCKFLK-FLPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 376



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 3/229 (1%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ + L GC  L+  P + ++ E L KL  +  T + +VP S+  L  L  L    C  L
Sbjct: 55  LKVVILRGCHSLEAIPDL-SNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
                 ++GLK L+ L LSGC  L  +P+ +G +  L+EL + GTAI+    SI  ++NL
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTXLKELLLDGTAIKNLPXSIXRLQNL 173

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
             L                                                  C    + 
Sbjct: 174 EXLSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCT-SLSK 232

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           IP  I+ L SLK+L++N +    LP   S L +L +    DCK L+ +P
Sbjct: 233 IPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 281



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 54/249 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M  L  L L+G++I E+P                             L+ L  L +S
Sbjct: 331 IGDMDTLYSLNLEGSNIEELPEE------------------------FGKLEKLVELRMS 366

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL-------------- 106
            C  LK+ P+    ++ L +LY+  T ++E+P S   L  L +L +              
Sbjct: 367 NCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVP 426

Query: 107 --NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
             +E    V +P+S + L  L+ L+         +PD L K+  L +L++         S
Sbjct: 427 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPS 486

Query: 165 SIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSL 218
           S+  + NL+ L    C E    PP        LP  L  L  ++C     +  L+ +  L
Sbjct: 487 SLVKLSNLQELSLRDCRELKRLPP--------LPCKLEQLNLANCFSLESVSDLSELTIL 538

Query: 219 TKLDLSDCG 227
           T L+L++C 
Sbjct: 539 TDLNLTNCA 547



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 32/66 (48%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L    C  L      +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 102 LIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTXLKELLLDGTAIK 161

Query: 743 GLPASI 748
            LP SI
Sbjct: 162 NLPXSI 167



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 27/151 (17%)

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEEL--DVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           ++LK + L GC  LE +PD L   E+LE+L  +     ++ P S    + NLR L     
Sbjct: 53  ENLKVVILRGCHSLEAIPD-LSNHEALEKLVFEQCTLLVKVPKS----VGNLRKL----- 102

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                     +HL F    K    ++  L  ++G+  L KL LS C    + +P +I  +
Sbjct: 103 ----------IHLDFRRCSK----LSEFLVDVSGLKLLEKLFLSGCS-DLSVLPENIGAM 147

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL 271
             LKEL L+      LP SI  L NLE L L
Sbjct: 148 TXLKELLLDGTAIKNLPXSIXRLQNLEXLSL 178


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 138/278 (49%), Gaps = 14/278 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L  LYLD   +  +P  I  L  L++L L   + L +LP  I  L+ LR L+ S
Sbjct: 105 IGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQ-LKTLPKEIEYLQKLRELD-S 162

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + L   P+ +  +++L +L L    +  +P  I  L  L++LYL     L  LP+ I 
Sbjct: 163 TNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLG-ADLLTTLPNDIG 221

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            LK+L+ L L+   +L  +P+ +G +++L+EL +S   ++   + I  +KNL+ L+ SG 
Sbjct: 222 YLKNLQKLYLN-TGRLTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGN 280

Query: 180 --CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSD 236
                P            NL G         LP   G + SL +L+LS   L    +P +
Sbjct: 281 QLTTLPKEFGKLQSLRELNLSGNQLT----TLPKEFGKLQSLRELNLSGNQL--TTLPKE 334

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           I  L SL+EL L+ N   TLP  I  L NL+EL L+D 
Sbjct: 335 IGKLQSLRELNLSGNQLTTLPKEIGHLKNLQELYLDDI 372



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 129/276 (46%), Gaps = 36/276 (13%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
           L +LP  I  LK L+ L L+  ++L   P  +  ++ L  LYLD   +  +P  I  L  
Sbjct: 75  LQALPKEIGKLKKLQVLTLNN-NQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKK 133

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           L++LYLN+ + L  LP  I  L+ L+ L+ S    L  +P  +G +++LEEL +S   + 
Sbjct: 134 LQVLYLNDNQ-LKTLPKEIEYLQKLRELD-STNNPLTTLPKEIGYLKNLEELILSNNELT 191

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLT 219
                I  +KNL+ LY                            +   LP+  G + +L 
Sbjct: 192 TLPKEIGKLKNLQVLYL------------------------GADLLTTLPNDIGYLKNLQ 227

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
           KL L+   L    +P+DI  L +L+ELYL+ N   TLP  I  L NL+ L L    +L +
Sbjct: 228 KLYLNTGRL--TTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHL-SGNQLTT 284

Query: 280 LPQIPPNLQFVR-----ANGCSSLVTLFGALKLCRS 310
           LP+    LQ +R      N  ++L   FG L+  R 
Sbjct: 285 LPKEFGKLQSLRELNLSGNQLTTLPKEFGKLQSLRE 320


>gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana]
          Length = 1189

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 158/332 (47%), Gaps = 44/332 (13%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L +L L + +S+ E+PSSIE LT L++L L+GC +L  LP   ++ K L  L L
Sbjct: 686  LSTATNLEELNLRNCSSLVELPSSIEKLTSLQILDLQGCSSLVELPSFGNATK-LEILYL 744

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
              C  L+K P  + +  +L KL L   S I E+P+ IE    L  L L  C +L+ LP S
Sbjct: 745  DYCRSLEKLPPSINA-NNLQKLSLRNCSRIVELPA-IENATNLWELNLLNCSSLIELPLS 802

Query: 119  INGLKSL--KTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRS 174
            I   ++L  K LN+SGC  L  +P ++G + +L+E D+S  +  +  P SSI  ++NL  
Sbjct: 803  IGTARNLFLKELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVELP-SSIGNLQNLCK 861

Query: 175  LYFSGCNEPPASASWHLHLPFNL-------LGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
            L   GC++  A       LP N+       L  + C      P ++    +  L L+   
Sbjct: 862  LIMRGCSKLEA-------LPININLKSLDTLNLTDCSQLKSFPEIS--THIKYLRLTGTA 912

Query: 228  LGEAAI---------PSDIDNLHSLKELYLNRNNFVTLPAS---------ISGLLNLEEL 269
            + E  +            I    SLKE     +    L  S         +  +  L   
Sbjct: 913  IKEVPLSIMSWSPLAEFQISYFESLKEFPHAFDIITELQLSKDIQEVTPWVKRMSRLRYF 972

Query: 270  ELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
             L +C  L SLPQ+P +L ++ A+ C SL  L
Sbjct: 973  RLNNCNNLVSLPQLPDSLAYLYADNCKSLEKL 1004



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 35/264 (13%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           SKL+K  +    + +L  + L  +S  +   ++     LE L L  C +LV LPSSI  L
Sbjct: 654 SKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELNLRNCSSLVELPSSIEKL 713

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLE--ELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            SL+ L+L GC  L  +P + G    LE   LD   +  + P S      NL+ L    C
Sbjct: 714 TSLQILDLQGCSSLVELP-SFGNATKLEILYLDYCRSLEKLPPS--INANNLQKLSLRNC 770

Query: 181 N---EPPASAS----WHLH---------LPFNL----------LGKSSCPVALMLPSLTG 214
           +   E PA  +    W L+         LP ++          L  S C   + LPS  G
Sbjct: 771 SRIVELPAIENATNLWELNLLNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIG 830

Query: 215 -VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELE 272
            + +L + DLS+C      +PS I NL +L +L +   +    LP +I+ L +L+ L L 
Sbjct: 831 DMTNLKEFDLSNCS-NLVELPSSIGNLQNLCKLIMRGCSKLEALPININ-LKSLDTLNLT 888

Query: 273 DCKRLQSLPQIPPNLQFVRANGCS 296
           DC +L+S P+I  +++++R  G +
Sbjct: 889 DCSQLKSFPEISTHIKYLRLTGTA 912



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 77/183 (42%), Gaps = 53/183 (28%)

Query: 1    MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +  M +L +  L   S + E+PSSI  L  L  L ++GC  L +LP+ I+ LK L TL L
Sbjct: 829  IGDMTNLKEFDLSNCSNLVELPSSIGNLQNLCKLIMRGCSKLEALPININ-LKSLDTLNL 887

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI------------------------ 95
            + CS+LK FP+I   ++    L L GT+I EVP SI                        
Sbjct: 888  TDCSQLKSFPEISTHIK---YLRLTGTAIKEVPLSIMSWSPLAEFQISYFESLKEFPHAF 944

Query: 96   -------------ELLP------GLELLYLNECKNLVRLPSSINGLKSL-----KTLNLS 131
                         E+ P       L    LN C NLV LP   + L  L     K+L   
Sbjct: 945  DIITELQLSKDIQEVTPWVKRMSRLRYFRLNNCNNLVSLPQLPDSLAYLYADNCKSLEKL 1004

Query: 132  GCC 134
             CC
Sbjct: 1005 DCC 1007



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 5/120 (4%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGL 744
           L L+ C++LE+LP +I+A   L  L+L   S+  E P I ++ + L E++L   +++  L
Sbjct: 742 LYLDYCRSLEKLPPSINA-NNLQKLSLRNCSRIVELPAIENATN-LWELNLLNCSSLIEL 799

Query: 745 PASIELLSGNILS--NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P SI       L   N+  C +L  LPS+I  + +L+    S CS L  +  ++G +++L
Sbjct: 800 PLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQNL 859


>gi|147778859|emb|CAN73697.1| hypothetical protein VITISV_038484 [Vitis vinifera]
          Length = 784

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 38/243 (15%)

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
           C + + A    +  L SL++L L+ NNFVTLP++I  L  L+ L LE+CKRLQ+LP++P 
Sbjct: 555 CNISDGATLDSLGFLSSLEDLDLSENNFVTLPSNIXRLPXLKMLGLENCKRLQALPELPT 614

Query: 286 NLQFVRANGCSSLVTL----FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ 341
           +++ + A  C+SL T+    FG+L +       I C      + ++GL +          
Sbjct: 615 SIRSIMARNCTSLETISNQSFGSLLMTVRLKEHIYCP-----INRDGLLVP--------- 660

Query: 342 AVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHS 401
                   LS V  GS+IP W  YQ+ G  +    P   +B N  +G A+C V  VP+  
Sbjct: 661 -------ALSAVXFGSRIPDWIRYQSSGXEVKAELPPNWFBSN-FLGLALCVV-TVPRXG 711

Query: 402 TGTYLFHSYPAHELECSMDGSGEGHYIYFRGKF-------GHVVSDHLWLLF--LPRHGH 452
             + L   +      C++  S   H     G +       G V SDHLWL++  LP H  
Sbjct: 712 LVS-LADFFGLFWRSCTLFYSTSNHASSSLGVYTCPNHLKGKVESDHLWLVYVLLP-HFI 769

Query: 453 NWQ 455
           NW+
Sbjct: 770 NWE 772



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 17/187 (9%)

Query: 629 KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGT---DIRELSLAIELLFGLVQ 685
           +K GR+ VR  SP+EPG  SRLW       D+  VL+  T   D+  +SL +  L   + 
Sbjct: 443 QKMGREIVREASPKEPGKXSRLWIH----DDVNHVLTKNTGTKDVEGISLDLSSL-KEIN 497

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSG---LSKFREFPEITSSRDQLLEIHLEGTAIR 742
            T      + RL R +  L+ L  +NL     L++  +F  +T+         L  +A  
Sbjct: 498 FTNEAFAPMNRL-RLLKVLENLKFMNLKHSKFLTETLDFSRVTNLERLSSLKTLSLSAC- 555

Query: 743 GLPASIELLSGNILSNLKDC----KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            +     L S   LS+L+D      N  +LPS I  L  L+M+    C +L+ + E    
Sbjct: 556 NISDGATLDSLGFLSSLEDLDLSENNFVTLPSNIXRLPXLKMLGLENCKRLQALPELPTS 615

Query: 799 VESLEVR 805
           + S+  R
Sbjct: 616 IRSIMAR 622


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 143/271 (52%), Gaps = 6/271 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L+ L L    +T+VP SI  L  L  L L G + L+ +  +IS L  L  L LS
Sbjct: 64  ITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQ-LTQVSESISQLVNLTQLSLS 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L +FP+ ++ + +L++L L    + +VP SI  L  L  L L+    L ++P SI+
Sbjct: 123 G-NQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLS-YNQLTQVPESIS 180

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L+LS   KL  VP+++ ++ +L +L++S   + + + SI  + NL  L  SG 
Sbjct: 181 QLVNLTQLDLS-VNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGN 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S S    +    L  S   +  +  S++ + +LT+L LSD  L + +    I  L
Sbjct: 240 KLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVS--ESISQL 297

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            +L +L L+ N    +  SIS L+NL +L+L
Sbjct: 298 VNLTQLDLSSNQLTQVSESISQLVNLTQLDL 328



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 146/284 (51%), Gaps = 10/284 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++ + +L+ L L G  +T+ P SI  L  L  L+L   + L+ +P +IS L  L  L LS
Sbjct: 110 ISQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQ-LTQVPESISQLVNLTQLNLS 168

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L + P+ ++ + +L++L L    + +VP SI  L  L  L L+    L ++  SI+
Sbjct: 169 -YNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLS-YNQLTQVSESIS 226

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L+LSG  KL  V +++ ++ +L +L +SG  + +   SI  + NL  L  S  
Sbjct: 227 QLVNLTQLSLSGN-KLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDN 285

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S S    +    L  SS  +  +  S++ + +LT+LDLS   L + +    I  L
Sbjct: 286 QLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVS--ESISQL 343

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
            +L +L L+ N    +P SIS L+NL  L L D +    L Q+P
Sbjct: 344 VNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQ----LTQVP 383



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 142/271 (52%), Gaps = 6/271 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++ + +L+ L L    +T+VP SI  L  L  L L     L+ +P +IS L  L  L+LS
Sbjct: 133 ISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNL-SYNQLTQVPESISQLVNLTQLDLS 191

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL + P+ ++ + +L++L L    + +V  SI  L  L  L L+  K L ++  SI+
Sbjct: 192 -VNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGNK-LTQVSESIS 249

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L+LSG  KL  VP+++ ++ +L +L +S   + + + SI  + NL  L  S  
Sbjct: 250 QLVNLTQLSLSGN-KLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQLDLSSN 308

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S S    +    L  SS  +  +  S++ + +LT+L+LS   L +  +P  I  L
Sbjct: 309 QLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQ--VPESISQL 366

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            +L  L L+ N    +P SIS L+NL +L+L
Sbjct: 367 VNLTWLNLSDNQLTQVPESISQLVNLTQLDL 397



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 141/278 (50%), Gaps = 29/278 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++ + +L+ L L    +T+VP SI  L  L  L L     L+ +P +IS L  L  L LS
Sbjct: 41  ISQLVNLTQLDLSHNQLTQVPESITQLVNLTKLNL-SVNQLTQVPESISQLVNLTKLNLS 99

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L +  + ++ + +L++L L G  + + P SI  L  L  L L+  + L ++P SI+
Sbjct: 100 G-NQLTQVSESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQ-LTQVPESIS 157

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  LNLS   +L  VP+++ ++ +L +LD+S   + +   SI  + NL        
Sbjct: 158 QLVNLTQLNLS-YNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLT------- 209

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                     L+L +N L + S        S++ + +LT+L LS   L + +    I  L
Sbjct: 210 ---------QLNLSYNQLTQVS-------ESISQLVNLTQLSLSGNKLTQVS--ESISQL 251

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
            +L +L L+ N    +P SIS L+NL +L L D +  Q
Sbjct: 252 VNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQ 289



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 139/271 (51%), Gaps = 6/271 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++ + +L+ L L    +T+VP SI  L  L  L L   K L+ +P +IS L  L  L LS
Sbjct: 156 ISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNK-LTQVPESISQLVNLTQLNLS 214

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L +  + ++ + +L++L L G  + +V  SI  L  L  L L+  K L ++P SI+
Sbjct: 215 -YNQLTQVSESISQLVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNK-LTQVPESIS 272

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L+LS   +L  V +++ ++ +L +LD+S   + + + SI  + NL  L  S  
Sbjct: 273 QLVNLTQLSLSDN-QLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSN 331

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S S    +    L  S   +  +  S++ + +LT L+LSD  L +  +P  I  L
Sbjct: 332 QLTQVSESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQ--VPESISQL 389

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            +L +L L  N    +P  +  L NL+EL+L
Sbjct: 390 VNLTQLDLFGNKITEIPDWLEELPNLKELDL 420



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 27/194 (13%)

Query: 78  LSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
           +++L L G  + +VP SI  L  L  L L+    L ++P SI+ L +L  L+LS   +L 
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLS-VNQLTQVPESISQLVNLTQLDLSHN-QLT 58

Query: 138 NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL 197
            VP+++ ++ +L +L++S   + +   SI  + NL  L  SG                N 
Sbjct: 59  QVPESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSG----------------NQ 102

Query: 198 LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
           L + S        S++ + +LT+L LS   L +   P  I  L +L +L L+RN    +P
Sbjct: 103 LTQVS-------ESISQLVNLTQLSLSGNQLTQ--FPESISQLVNLTQLSLSRNQLTQVP 153

Query: 258 ASISGLLNLEELEL 271
            SIS L+NL +L L
Sbjct: 154 ESISQLVNLTQLNL 167



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 11/162 (6%)

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCNE 182
           +  LNLSG  +L  VP+++ ++ +L ELD+S   + +   SI  + NL  L  S     +
Sbjct: 1   MTQLNLSGN-QLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQ 59

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            P S +  ++L    L  S   +  +  S++ + +LTKL+LS   L + +    I  L +
Sbjct: 60  VPESITQLVNL--TKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVS--ESISQLVN 115

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
           L +L L+ N     P SIS L+NL +L L   +    L Q+P
Sbjct: 116 LTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQ----LTQVP 153



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 2/108 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++ + +L+ L L    +T+V  SI  L  L  L L   K L+ +P +IS L  L  L LS
Sbjct: 317 ISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINK-LTQVPESISQLVNLTWLNLS 375

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNE 108
             ++L + P+ ++ + +L++L L G  I E+P  +E LP L+ L L +
Sbjct: 376 D-NQLTQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDLRQ 422


>gi|77696205|gb|ABB00837.1| disease resistance protein [Arabidopsis thaliana]
 gi|77696211|gb|ABB00840.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 164/386 (42%), Gaps = 101/386 (26%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +LY+  + + ++    + LT L+ + L   ++L  LP  +S+   L  L+LS C    
Sbjct: 101 LVELYMPSSQLEKLWEGTQPLTHLKKMNLFASRHLKELP-DLSNATNLARLDLSYCE--- 156

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                               S+ E+PSS   L  LE L +N C NL  +P+ +N L SL+
Sbjct: 157 --------------------SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-LASLE 195

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           T+N+ GC +L N+P       ++ +L VS TA+     SI     L  L  S   +    
Sbjct: 196 TVNMRGCSRLRNIPVM---STNITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSGK---- 248

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                     L G +  P+           SL +LDL D         SDI+        
Sbjct: 249 ----------LKGITHLPI-----------SLKQLDLID---------SDIE-------- 270

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
                   T+P  I  L  L  L L  C+RL SLP++P +L+F+ A+ C SL T+F  L 
Sbjct: 271 --------TIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLN 322

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             +++    NC    K  ++  +  S+L                + + PG ++P  F +Q
Sbjct: 323 TPKAELNFTNCFKLGKQAQRAIVQRSLLLG--------------TALLPGREVPAEFDHQ 368

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAIC 392
            +G+++T+ RP          GF +C
Sbjct: 369 GKGNTLTI-RPG--------TGFVVC 385



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 22/138 (15%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGC---KNLSSLPVTISSLKCLRTLELSGC 62
           +++ LY+  T++ E+P SI   + LE L++      K ++ LP+++  L  +        
Sbjct: 214 NITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDLID------- 266

Query: 63  SKLKKFPQIVASMEDLSKLYLDG----TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S ++  P+ + S+  L  L L G     S+ E+PSS      L  L  ++C++L  +   
Sbjct: 267 SDIETIPECIKSLHLLYILNLSGCRRLASLPELPSS------LRFLMADDCESLETVFCP 320

Query: 119 INGLKSLKTLNLSGCCKL 136
           +N  K+   LN + C KL
Sbjct: 321 LNTPKA--ELNFTNCFKL 336


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 137/276 (49%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T  P  I  L  L+ L L     + ++P  I  L+ L++L L 
Sbjct: 115 IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-SANQIKTIPKEIEKLQKLQSLYLP 173

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  LYL    I  +P  IE L  L+ LYL++ + L  LP  I 
Sbjct: 174 N-NQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQ-LTTLPQEIE 231

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L+ L++L L    +L  +P  +G++++L+ L ++   +      I  ++NL+ LY   +
Sbjct: 232 KLQKLESLGLDNN-QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 290

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +   +   LP   G + +L +L LS+  L    IP +I
Sbjct: 291 QLTTIPKEIGQLQNLQMLDLGNNQLTI---LPKEIGKLQNLQELYLSNNQL--TTIPKEI 345

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L +L+ELYL+ N   T+P  I  L NL+EL L +
Sbjct: 346 GQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN 381



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 45/199 (22%)

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+ +P  +G++++L+ LD+S   +      I L K +R L                   
Sbjct: 38  KLKALPKKIGQLKNLQMLDLSDNQL------IILPKEIRQLKN----------------- 74

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
             +L   S  + ++   +  + +L  LDL    L    +P +I  L +L+ELYL+ N   
Sbjct: 75  LQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQL--TILPKEIGKLQNLQELYLSNNQLT 132

Query: 255 TLPASISGLLNLEEL------------ELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF 302
           T P  I  L  L+ L            E+E  ++LQSL        ++  N  ++L    
Sbjct: 133 TFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL--------YLPNNQLTTLPQEI 184

Query: 303 GALKLCRSKYTIINCIDSL 321
           G L+  +  Y   N I +L
Sbjct: 185 GKLQKLQWLYLSYNQIKTL 203


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 143/297 (48%), Gaps = 16/297 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L    L G  +T VP+ I  LT L+ L L   + L+S+P  I  L  L  L L+
Sbjct: 226 IGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDNR-LASVPADIGQLTSLEGLGLN 284

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +  L  L L G  +  VP+ I  L  L  L LN  + L  +P+ I 
Sbjct: 285 G-NQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQ-LTSVPAEIW 342

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L SL+ L L G  +L +VP  +G++ SL EL+++   +    + I+ + +LR L+  G 
Sbjct: 343 QLTSLRGLFLGGN-RLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGN 401

Query: 180 -CNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                PA       L    L G     V   +  LT   +LT+L L    L   ++P++I
Sbjct: 402 RLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQLT---ALTELSLQRNKL--KSVPAEI 456

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
             L +LKEL+LN N   ++PA I  L  L  L L D  RL S   +P  ++ +RA G
Sbjct: 457 GQLATLKELWLNDNLLTSVPAEIGQLRALTSLNL-DRNRLTS---VPAAIRELRAAG 509



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 106/225 (47%), Gaps = 28/225 (12%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           LEL         P  V  +  L +L L+G  +  VP  I  L  L    L     L  +P
Sbjct: 188 LELEDVGLTGAVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLG-GNELTSVP 246

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           + I  L SL+ L+LS   +L +VP  +G++ SLE L ++G  +    + I+ + +L+ L 
Sbjct: 247 AEIGQLTSLQWLDLSD-NRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLG 305

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
             G                N L  +S P       +  + SL++L+L++  L   ++P++
Sbjct: 306 LRG----------------NQL--TSVPA-----EIGQLTSLSELNLNNNQL--TSVPAE 340

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           I  L SL+ L+L  N   ++PA I  L +L EL L +  +L S+P
Sbjct: 341 IWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNN-NQLTSVP 384


>gi|298378158|gb|ADI80539.1| recognition of Peronospora parasitica 1 [Arabidopsis thaliana]
          Length = 1154

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 146/306 (47%), Gaps = 41/306 (13%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L +L L   +S+ E+PS     T LE L L+ C++L  LP   ++ K LR L+L
Sbjct: 727 LSTATNLEELRLSNCSSLVELPS-FGNATKLEKLDLENCRSLVKLPAIENATK-LRKLKL 784

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CS L + P  + +  +L KL ++G +S+  +PSSI  +  LE   L+ C NLV LPSS
Sbjct: 785 EDCSSLIELPLSIGTATNLKKLDMNGCSSLVRLPSSIGDMTSLEGFDLSNCSNLVELPSS 844

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  L+ L  L + GC KLE +P  +  + SL  LD++  +  R  S   +  ++ SLY  
Sbjct: 845 IGNLRKLALLLMRGCSKLETLPTNINLI-SLRILDLTDCS--RLKSFPEISTHIDSLYLI 901

Query: 179 GC--NEPPAS-ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
           G    E P S  SW     F +   S        P    +  +TKL LS           
Sbjct: 902 GTAIKEVPLSIMSWSPLADFQI---SYFESLKEFPHAFDI--ITKLQLS----------K 946

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
           DI  +                P  +  +  L +L L +C  L SLPQ+P +L ++ A+ C
Sbjct: 947 DIQEV----------------PPWVKRMSRLRDLRLNNCNNLVSLPQLPDSLAYLYADNC 990

Query: 296 SSLVTL 301
            SL  L
Sbjct: 991 KSLERL 996



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 76/168 (45%), Gaps = 52/168 (30%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +++ E+PSSI  L  L LL ++GC  L +LP  I+ L  LR L+L+ CS+LK FP+I   
Sbjct: 836 SNLVELPSSIGNLRKLALLLMRGCSKLETLPTNIN-LISLRILDLTDCSRLKSFPEISTH 894

Query: 75  MEDLSKLYLDGTSIAEVPSSI------------------------ELLPGLEL------- 103
           ++ L   YL GT+I EVP SI                        +++  L+L       
Sbjct: 895 IDSL---YLIGTAIKEVPLSIMSWSPLADFQISYFESLKEFPHAFDIITKLQLSKDIQEV 951

Query: 104 ------------LYLNECKNLVRLPSSINGLKSL-----KTLNLSGCC 134
                       L LN C NLV LP   + L  L     K+L    CC
Sbjct: 952 PPWVKRMSRLRDLRLNNCNNLVSLPQLPDSLAYLYADNCKSLERLDCC 999



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 12/201 (5%)

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
           Y N C     LPS+ N  + L  L++S   KL N+ +   ++ +L+ +D+S ++  +   
Sbjct: 673 YQNIC-----LPSTFNP-EFLVELDMS-FSKLWNLWEGTKQLRNLKWMDLSYSSYLKELP 725

Query: 165 SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
           ++    NL  L  S C+      S+        L   +C   + LP++     L KL L 
Sbjct: 726 NLSTATNLEELRLSNCSSLVELPSFGNATKLEKLDLENCRSLVKLPAIENATKLRKLKLE 785

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
           DC      +P  I    +LK+L +N  ++ V LP+SI  + +LE  +L +C  L  LP  
Sbjct: 786 DCS-SLIELPLSIGTATNLKKLDMNGCSSLVRLPSSIGDMTSLEGFDLSNCSNLVELPSS 844

Query: 284 PPNLQ---FVRANGCSSLVTL 301
             NL+    +   GCS L TL
Sbjct: 845 IGNLRKLALLLMRGCSKLETL 865



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 40/206 (19%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D + + EL L+I     L +L +NGC +L RLP +I  +  L   +LS  S   E   
Sbjct: 784 LEDCSSLIELPLSIGTATNLKKLDMNGCSSLVRLPSSIGDMTSLEGFDLSNCSNLVE--- 840

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                               LP+SI  L    L  ++ C  L++LP+ IN L SLR++  
Sbjct: 841 --------------------LPSSIGNLRKLALLLMRGCSKLETLPTNIN-LISLRILDL 879

Query: 784 SGCSKLKNVTETLGKVESL--------EVRLS--SWNRPKMQNDFDCVEQ-----SAVET 828
           + CS+LK+  E    ++SL        EV LS  SW+ P         E       A + 
Sbjct: 880 TDCSRLKSFPEISTHIDSLYLIGTAIKEVPLSIMSWS-PLADFQISYFESLKEFPHAFDI 938

Query: 829 VTKLAKAELLRDSDSWKKNVDKCMKL 854
           +TKL  ++ +++   W K + +   L
Sbjct: 939 ITKLQLSKDIQEVPPWVKRMSRLRDL 964



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 12/140 (8%)

Query: 664 LSDGTDIRELSLA-----IEL-LFG----LVQLTLNGCKNLERLPRTISALKYLSTLNLS 713
           LS  T++ EL L+     +EL  FG    L +L L  C++L +LP   +A K L  L L 
Sbjct: 727 LSTATNLEELRLSNCSSLVELPSFGNATKLEKLDLENCRSLVKLPAIENATK-LRKLKLE 785

Query: 714 GLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
             S   E P    +   L ++ + G +++  LP+SI  ++     +L +C NL  LPS+I
Sbjct: 786 DCSSLIELPLSIGTATNLKKLDMNGCSSLVRLPSSIGDMTSLEGFDLSNCSNLVELPSSI 845

Query: 773 NGLRSLRMMYPSGCSKLKNV 792
             LR L ++   GCSKL+ +
Sbjct: 846 GNLRKLALLLMRGCSKLETL 865


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 143/283 (50%), Gaps = 10/283 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L  LYL    ITE+P ++  LT L  L L   + +  +P  ++ L  L  L+L+
Sbjct: 467 LAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQ-IIKIPKALAKLSNLTQLDLN 525

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +K+ + P+ +A + +L++LYL    I E+P ++  L  L  L L    N+  +P +I 
Sbjct: 526 R-NKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPEAIT 584

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L +L  LNL+   ++  +P+ + K+ +L +L+++   I     +I  + NL  L  +  
Sbjct: 585 KLTNLTQLNLT-SSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSN 643

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
              E P + +   +L    L  +S  +  +  ++  + +LT+L LS   + E  IP  I 
Sbjct: 644 QITEIPEAIAKLTNL--TQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITE--IPEAIA 699

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            L +L +L L  N    +P +I+ L NL +L+L    R+  +P
Sbjct: 700 KLTNLTQLILTSNQITEIPDAITKLTNLTQLDL-SYNRISEIP 741



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 153/303 (50%), Gaps = 11/303 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L+ L L    IT++P ++  LT L  L L   + ++ +P  I+ L  L  L+LS
Sbjct: 306 LAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQ-ITEIPEVIAKLTNLTQLDLS 364

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++ K P+ +A + +L++L L    I+E+P ++  L  L  + L+  + +  +P ++ 
Sbjct: 365 -YNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNR-ISEIPEALA 422

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS-- 178
            L +L  L+LS   ++  +P+ L K+ +L ++ +    I     ++  + NLR LY S  
Sbjct: 423 KLTNLTQLDLS-YNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYN 481

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
              E P + +   +L    L  S   +  +  +L  + +LT+LDL+   + E  IP  + 
Sbjct: 482 RITEIPEALAKLTNL--TQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITE--IPEALA 537

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL-QFVRANGCSS 297
            L +L +LYL  N    +P +++ L NL +L+L     +  +P+    L    + N  SS
Sbjct: 538 KLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSS 597

Query: 298 LVT 300
            +T
Sbjct: 598 QIT 600



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 20/278 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L +L++    ITE+P +I  L+ L  L +     ++ +P  I+ L  LR L++S
Sbjct: 168 IAKLSNLRELHVSSNQITEIPEAIANLSNLRELHV-SSNQITEIPEAIAKLINLRELQVS 226

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +K+ + P+++A + +L KLYL    I E+P  I  L  L  L L+    + ++  ++ 
Sbjct: 227 -SNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLS-YNQITKISEALA 284

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS--LYFS 178
            L +L  + L    K+  +PD L K+ +L +LD+S   I +   ++  + NL    LY +
Sbjct: 285 KLINLTQIILHN-NKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSN 343

Query: 179 GCNEPPASAS-----WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
              E P   +       L L +N + K   P A     L  + +LT+L L    + E  I
Sbjct: 344 QITEIPEVIAKLTNLTQLDLSYNQITK--IPEA-----LAKLTNLTQLILYSNRISE--I 394

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           P  +  L +L ++ L+ N    +P +++ L NL +L+L
Sbjct: 395 PEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDL 432



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 28/287 (9%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCK------------------NLSSLPVTISS 50
           +L L G  +TE+P  I  L  LE L L G K                  NL +LP+ +  
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLIL-GKKLEGYERVGSRILEKVSGNNLKTLPLELLG 78

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           L  LR L++SG + L+  P +V  +  L +L L    + E+P +I  L  L  LY N   
Sbjct: 79  LPNLRKLDISG-NPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFN-SN 136

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
           ++ ++P  I  L +L+ L++S   K+  +P+ + K+ +L EL VS   I     +I  + 
Sbjct: 137 HISKIPELIAKLSNLRELHVS-SNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLS 195

Query: 171 NLRSLYFSG--CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           NLR L+ S     E P + +  ++L    L  SS  +  +   +  + +L KL L +  +
Sbjct: 196 NLRELHVSSNQITEIPEAIAKLINL--RELQVSSNKITEIPEVIAKLTNLRKLYLRNNQI 253

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            E  IP  I  L +L +L L+ N    +  +++ L+NL ++ L + K
Sbjct: 254 TE--IPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNK 298



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 29/294 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L  L + G  +  +P  +  +  LE L L   + L+ +P  I++L  L  L  +
Sbjct: 76  LLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVE-LTEIPEAIANLSNLTQLYFN 134

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + + K P+++A + +L +L++    I E+P +I  L  L  L+++    +  +P +I 
Sbjct: 135 -SNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVS-SNQITEIPEAIA 192

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L +L+ L++S   ++  +P+ + K+ +L EL VS   I      I  + NLR LY   +
Sbjct: 193 NLSNLRELHVS-SNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNN 251

Query: 179 GCNEPPASAS-----WHLHLPFNLLGKSSCPVALML----------------PSLTGVCS 217
              E P   +       L L +N + K S  +A ++                 +L  + +
Sbjct: 252 QITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLIN 311

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           LT+LDLS   +    IP  +  L +L +L L  N    +P  I+ L NL +L+L
Sbjct: 312 LTQLDLSYNQI--TKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDL 363



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 39/245 (15%)

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNE-----------------CKNLVRL 115
           A  E   +L L G  + E+P  I  L  LE L L +                   NL  L
Sbjct: 13  AVAEGWRELDLSGQELTELPGEIGKLQQLESLILGKKLEGYERVGSRILEKVSGNNLKTL 72

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           P  + GL +L+ L++SG   LE++PD + ++  LEEL +    +     +I  + NL  L
Sbjct: 73  PLELLGLPNLRKLDISGNP-LESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQL 131

Query: 176 YFSGCNEPPASASWHLHLPFNLLGK---------SSCPVALMLPSLTGVCSLTKLDLSDC 226
           YF+         S H+     L+ K         SS  +  +  ++  + +L +L +S  
Sbjct: 132 YFN---------SNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSN 182

Query: 227 GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
            + E  IP  I NL +L+EL+++ N    +P +I+ L+NL EL++   K +  +P++   
Sbjct: 183 QITE--IPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNK-ITEIPEVIAK 239

Query: 287 LQFVR 291
           L  +R
Sbjct: 240 LTNLR 244



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 19/159 (11%)

Query: 655 DEFPDIV-------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +  PD+V       +++    ++ E+  AI  L  L QL  N   ++ ++P  I+ L  L
Sbjct: 93  ESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFN-SNHISKIPELIAKLSNL 151

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKD----CK 763
             L++S  +K  E PE  +    L E+H+    I  +P +I     N LSNL++      
Sbjct: 152 RELHVSS-NKITEIPEAIAKLSNLRELHVSSNQITEIPEAI----AN-LSNLRELHVSSN 205

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +  +P  I  L +LR +  S  +K+  + E + K+ +L
Sbjct: 206 QITEIPEAIAKLINLRELQVS-SNKITEIPEVIAKLTNL 243


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  LS L L    +  +P+ I  LT L  L L     L+S+P  I  L  LR L L 
Sbjct: 82  IGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELS-SNQLTSVPAEIGLLTSLRQLHLI 140

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C++L   P  +  +  L +L L GT +  +P+ I  L  LE+L L +  +L  +P+ I 
Sbjct: 141 -CNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLEL-QNNHLTSVPAEIG 198

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ L+L G  +L +VP  +G++ SL+ LD+S   +    + I  + +L  L+    
Sbjct: 199 QLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDN 258

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               +S P       +  + SL +L L    L   ++PS+I  L
Sbjct: 259 Q------------------FTSVPA-----EIGQLTSLRELRLGGNQL--TSVPSEIGQL 293

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            SLKEL+L  N   ++PA +  L +L++L L D      L  +P  ++ +RA GC+
Sbjct: 294 TSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRD----NLLTSVPTVVRELRAAGCT 345



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 122/249 (48%), Gaps = 28/249 (11%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP 92
           L L+G   + +LP  I  L  L TL L+  +KL+  P  +  +  L +L L    +  VP
Sbjct: 67  LELEGFGLIGALPAEIGRLNALSTLNLT-SNKLRSLPAEIGQLTSLRRLELSSNQLTSVP 125

Query: 93  SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
           + I LL  L  L+L  C  L  +P+ I  L SLK L+L+G  +L ++P  + ++ SLE L
Sbjct: 126 AEIGLLTSLRQLHLI-CNQLTSVPAEIGQLTSLKELSLAGT-ELRSLPAEIWQLTSLEVL 183

Query: 153 DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSL 212
           ++    +    + I  + +LR L+  G        +W L         +S P       +
Sbjct: 184 ELQNNHLTSVPAEIGQLTSLRELHLGG--------NWRL---------TSVPA-----EI 221

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
             + SL  LDLS   L  A  P++I  L SL EL+L+ N F ++PA I  L +L EL L 
Sbjct: 222 GQLTSLQVLDLSRNQLTSA--PAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRL- 278

Query: 273 DCKRLQSLP 281
              +L S+P
Sbjct: 279 GGNQLTSVP 287



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           +V+L L G   +  LP  I  L  LSTLNL+  +K R  P        L  + L    + 
Sbjct: 64  VVELELEGFGLIGALPAEIGRLNALSTLNLTS-NKLRSLPAEIGQLTSLRRLELSSNQLT 122

Query: 743 GLPASIELLSGNILSNLK-DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
            +PA I LL+   L  L   C  L S+P+ I  L SL+ +  +G ++L+++   + ++ S
Sbjct: 123 SVPAEIGLLTS--LRQLHLICNQLTSVPAEIGQLTSLKELSLAG-TELRSLPAEIWQLTS 179

Query: 802 LEV 804
           LEV
Sbjct: 180 LEV 182



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R L   I  L  L +L L+    L  +P  I  L  L  L+L   ++    P       
Sbjct: 98  LRSLPAEIGQLTSLRRLELS-SNQLTSVPAEIGLLTSLRQLHLI-CNQLTSVPAEIGQLT 155

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L E+ L GT +R LPA I  L+   +  L++  +L S+P+ I  L SLR ++  G  +L
Sbjct: 156 SLKELSLAGTELRSLPAEIWQLTSLEVLELQN-NHLTSVPAEIGQLTSLRELHLGGNWRL 214

Query: 790 KNVTETLGKVESLEV 804
            +V   +G++ SL+V
Sbjct: 215 TSVPAEIGQLTSLQV 229


>gi|168050612|ref|XP_001777752.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670853|gb|EDQ57414.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 710

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 124/273 (45%), Gaps = 51/273 (18%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           VP S E LT LE L L  C NL  L   +  +K LR L LSGC  LK+ P  + ++  L+
Sbjct: 382 VPRSFEHLTCLEELYLNDCINLKKLDAILVGMKALRILSLSGCENLKEMPLGLKNLSKLT 441

Query: 80  KLYLDGTS----IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            L L   S    +  VP S E L  +E LYL++C NL +L ++  G+K+L+ L+LSGC  
Sbjct: 442 SLNLLALSGCDQLEVVPKSFEHLTCIEELYLDDCINLKKLDATCAGMKALRILSLSGCEN 501

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           LE++P  L  +  LE+ +                       FS C +   +     H  F
Sbjct: 502 LEDIPLRLKNLSKLEKFN-----------------------FSNCKKLKIA-----HDAF 533

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFV 254
                             G+ SL  L LS C   E  +P   ++L  LKELYLN   N  
Sbjct: 534 E-----------------GLTSLNLLALSGCDQLE-VVPRSFEDLTYLKELYLNDCINLK 575

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            L A+  G+  L  L L  C+ L+ +P    NL
Sbjct: 576 KLDATCVGMKALRILSLLGCENLEEMPLRLKNL 608



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 131/281 (46%), Gaps = 21/281 (7%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL- 78
           VP S E L  LE L  + C NL  L  T + +K LR L L GC  L++ P  + ++  L 
Sbjct: 69  VPKSFEHLICLEELYFEDCINLKKLDATCADIKALRILSLLGCENLEEMPLGLKNLSKLE 128

Query: 79  SKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
            KL L G  ++ E+P  ++ L  LELL+   CK L  +  +  GL SL  L + GC KLE
Sbjct: 129 KKLSLSGCENLEEMPLGLKNLSKLELLWFTNCKKLKIVHDAFEGLISLNALCIKGCEKLE 188

Query: 138 NVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGCNEPPASASWHLHLPFN 196
            VP +   +  LEEL ++     +   + F+ M+ LR L F GC            +P  
Sbjct: 189 VVPKSFEHLTCLEELYLNDCINLKKLDATFVGMRALRVLSFFGCENLE-------EIPLG 241

Query: 197 L--------LGKSSC-PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
           L        L  ++C  + +      G+ SL  L LS C   E  +P   ++L  L+ELY
Sbjct: 242 LKNLSKLEKLWLTNCKKLKITHDIFEGLTSLNLLALSGCVQLE-VVPRSFEHLTCLEELY 300

Query: 248 LNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           LN   N   L A +  +  L  L    C+ L+ +P    NL
Sbjct: 301 LNDCINLKKLDAILVDMKALRILSFSRCENLEEMPLRLKNL 341



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 150/332 (45%), Gaps = 37/332 (11%)

Query: 2   ASMKDLSDLYLDGT-SITEVPSSIELLTGLEL-LTLKGCKNLSSLPVTISSLKCLRTLEL 59
           A +K L  L L G  ++ E+P  ++ L+ LE  L+L GC+NL  +P+ + +L  L  L  
Sbjct: 98  ADIKALRILSLLGCENLEEMPLGLKNLSKLEKKLSLSGCENLEEMPLGLKNLSKLELLWF 157

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVRLPSS 118
           + C KLK        +  L+ L + G    EV P S E L  LE LYLN+C NL +L ++
Sbjct: 158 TNCKKLKIVHDAFEGLISLNALCIKGCEKLEVVPKSFEHLTCLEELYLNDCINLKKLDAT 217

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYF 177
             G+++L+ L+  GC  LE +P  L  +  LE+L ++     + T  IF  + +L  L  
Sbjct: 218 FVGMRALRVLSFFGCENLEEIPLGLKNLSKLEKLWLTNCKKLKITHDIFEGLTSLNLLAL 277

Query: 178 SGCNEPPASASWHLHL-------------------------PFNLLGKSSCPVALMLP-S 211
           SGC +         HL                            +L  S C     +P  
Sbjct: 278 SGCVQLEVVPRSFEHLTCLEELYLNDCINLKKLDAILVDMKALRILSFSRCENLEEMPLR 337

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDI-DNLHSLKELYLNRN-NFVTLPASISGLLNLEEL 269
           L  +C L KL  ++C   +  I  DI + L SL  L L        +P S   L  LEEL
Sbjct: 338 LKNLCKLEKLWFTNC--KKLNITHDIFEGLTSLNLLTLRECVQLEVVPRSFEHLTCLEEL 395

Query: 270 ELEDCKRLQSLPQIPPNLQFVRA---NGCSSL 298
            L DC  L+ L  I   ++ +R    +GC +L
Sbjct: 396 YLNDCINLKKLDAILVGMKALRILSLSGCENL 427



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 3/179 (1%)

Query: 7   LSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           + +LYLD   ++ ++ ++   +  L +L+L GC+NL  +P+ + +L  L     S C KL
Sbjct: 467 IEELYLDDCINLKKLDATCAGMKALRILSLSGCENLEDIPLRLKNLSKLEKFNFSNCKKL 526

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAE-VPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           K        +  L+ L L G    E VP S E L  L+ LYLN+C NL +L ++  G+K+
Sbjct: 527 KIAHDAFEGLTSLNLLALSGCDQLEVVPRSFEDLTYLKELYLNDCINLKKLDATCVGMKA 586

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGCNE 182
           L+ L+L GC  LE +P  L  +  LE L ++           F  + +L  L  SGC E
Sbjct: 587 LRILSLLGCENLEEMPLRLKNLSKLENLSLTNCKKLNIIHDAFEGLSSLIMLVISGCEE 645



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 2/148 (1%)

Query: 7   LSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L +LYL D  ++ ++ ++   +  L +L+L GC+NL  +P+ + +L  L  L L+ C KL
Sbjct: 563 LKELYLNDCINLKKLDATCVGMKALRILSLLGCENLEEMPLRLKNLSKLENLSLTNCKKL 622

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPS-SIELLPGLELLYLNECKNLVRLPSSINGLKS 124
                    +  L  L + G    EV S S E L  LE LYL++C NL +L ++  G+K+
Sbjct: 623 NIIHDAFEGLSSLIMLVISGCEELEVVSRSFECLTCLEQLYLDDCINLKKLDATYIGMKA 682

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEEL 152
           L+ ++LSGC  LE +P  L  +  LE++
Sbjct: 683 LRIISLSGCENLEEMPLELKNLSKLEKI 710



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 9/181 (4%)

Query: 646 NCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NC +L    D F  +  +    L +   +  +  + E L  L +L LN C NL++L   +
Sbjct: 351 NCKKLNITHDIFEGLTSLNLLTLRECVQLEVVPRSFEHLTCLEELYLNDCINLKKLDAIL 410

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA----IRGLPASIELLSGNILS 757
             +K L  L+LSG    +E P    +  +L  ++L   +    +  +P S E L+     
Sbjct: 411 VGMKALRILSLSGCENLKEMPLGLKNLSKLTSLNLLALSGCDQLEVVPKSFEHLTCIEEL 470

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE-VRLSSWNRPKMQN 816
            L DC NLK L +T  G+++LR++  SGC  L+++   L  +  LE    S+  + K+ +
Sbjct: 471 YLDDCINLKKLDATCAGMKALRILSLSGCENLEDIPLRLKNLSKLEKFNFSNCKKLKIAH 530

Query: 817 D 817
           D
Sbjct: 531 D 531



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 105/243 (43%), Gaps = 31/243 (12%)

Query: 75  MEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +++L  L L G+ ++ E+P  I+    L  L    CKN+  +     GL SL  LN+SGC
Sbjct: 4   LKELKILNLKGSKNLKEMPLGIKNFSKLNKLSFKNCKNMKIVQDVFEGLSSLNVLNMSGC 63

Query: 134 CKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCN----------- 181
            +LE VP +   +  LEEL       +++  ++   +K LR L   GC            
Sbjct: 64  EQLEMVPKSFEHLICLEELYFEDCINLKKLDATCADIKALRILSLLGCENLEEMPLGLKN 123

Query: 182 ----EPPASASWHLHL-----------PFNLLGKSSC-PVALMLPSLTGVCSLTKLDLSD 225
               E   S S   +L              LL  ++C  + ++  +  G+ SL  L +  
Sbjct: 124 LSKLEKKLSLSGCENLEEMPLGLKNLSKLELLWFTNCKKLKIVHDAFEGLISLNALCIKG 183

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
           C   E  +P   ++L  L+ELYLN   N   L A+  G+  L  L    C+ L+ +P   
Sbjct: 184 CEKLE-VVPKSFEHLTCLEELYLNDCINLKKLDATFVGMRALRVLSFFGCENLEEIPLGL 242

Query: 285 PNL 287
            NL
Sbjct: 243 KNL 245



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 12/141 (8%)

Query: 685 QLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG- 743
           +L+L+GC+NLE +P     LK LS L L   +  ++   +  + + L  I L    I+G 
Sbjct: 130 KLSLSGCENLEEMPL---GLKNLSKLELLWFTNCKKLKIVHDAFEGL--ISLNALCIKGC 184

Query: 744 -----LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
                +P S E L+      L DC NLK L +T  G+R+LR++   GC  L+ +   L  
Sbjct: 185 EKLEVVPKSFEHLTCLEELYLNDCINLKKLDATFVGMRALRVLSFFGCENLEEIPLGLKN 244

Query: 799 VESLE-VRLSSWNRPKMQNDF 818
           +  LE + L++  + K+ +D 
Sbjct: 245 LSKLEKLWLTNCKKLKITHDI 265



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           C +L      F D+  +    L+D  ++++L      +  L  L+L GC+NLE +P  + 
Sbjct: 547 CDQLEVVPRSFEDLTYLKELYLNDCINLKKLDATCVGMKALRILSLLGCENLEEMPLRLK 606

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKD 761
            L  L  L+L+   K     +       L+ + + G   +  +  S E L+      L D
Sbjct: 607 NLSKLENLSLTNCKKLNIIHDAFEGLSSLIMLVISGCEELEVVSRSFECLTCLEQLYLDD 666

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           C NLK L +T  G+++LR++  SGC  L+ +   L  +  LE
Sbjct: 667 CINLKKLDATYIGMKALRIISLSGCENLEEMPLELKNLSKLE 708



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 9/182 (4%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L+D  ++++L   +  +  L  L+ + C+NLE +P  +  L  L  L  +   K     +
Sbjct: 301 LNDCINLKKLDAILVDMKALRILSFSRCENLEEMPLRLKNLCKLEKLWFTNCKKLNITHD 360

Query: 724 ITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           I      L  + L E   +  +P S E L+      L DC NLK L + + G+++LR++ 
Sbjct: 361 IFEGLTSLNLLTLRECVQLEVVPRSFEHLTCLEELYLNDCINLKKLDAILVGMKALRILS 420

Query: 783 PSGCSKLKNV---TETLGKVESLE-VRLSSWNR----PKMQNDFDCVEQSAVETVTKLAK 834
            SGC  LK +    + L K+ SL  + LS  ++    PK      C+E+  ++    L K
Sbjct: 421 LSGCENLKEMPLGLKNLSKLTSLNLLALSGCDQLEVVPKSFEHLTCIEELYLDDCINLKK 480

Query: 835 AE 836
            +
Sbjct: 481 LD 482



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 23/144 (15%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L    +++E+ L I+    L +L+   CKN++ +      L  L+ LN+SG  +    P+
Sbjct: 12  LKGSKNLKEMPLGIKNFSKLNKLSFKNCKNMKIVQDVFEGLSSLNVLNMSGCEQLEMVPK 71

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                  L E++ E                       DC NLK L +T   +++LR++  
Sbjct: 72  SFEHLICLEELYFE-----------------------DCINLKKLDATCADIKALRILSL 108

Query: 784 SGCSKLKNVTETLGKVESLEVRLS 807
            GC  L+ +   L  +  LE +LS
Sbjct: 109 LGCENLEEMPLGLKNLSKLEKKLS 132



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 4/143 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L+D  ++++L      +  L  L+  GC+NLE +P  +  L  L  L L+   K +   +
Sbjct: 205 LNDCINLKKLDATFVGMRALRVLSFFGCENLEEIPLGLKNLSKLEKLWLTNCKKLKITHD 264

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           I      L  + L G   +  +P S E L+      L DC NLK L + +  +++LR++ 
Sbjct: 265 IFEGLTSLNLLALSGCVQLEVVPRSFEHLTCLEELYLNDCINLKKLDAILVDMKALRILS 324

Query: 783 PSGCSKLKNV---TETLGKVESL 802
            S C  L+ +    + L K+E L
Sbjct: 325 FSRCENLEEMPLRLKNLCKLEKL 347



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 33/224 (14%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L+D  ++++L   +  +  L  L+L+GC+NL+ +P  +  L  L++LNL  LS   +   
Sbjct: 397 LNDCINLKKLDAILVGMKALRILSLSGCENLKEMPLGLKNLSKLTSLNLLALSGCDQLEV 456

Query: 724 ITSSRDQLL---EIHLEGTA-IRGLPA------SIELLSGNILSNLKD------------ 761
           +  S + L    E++L+    ++ L A      ++ +LS +   NL+D            
Sbjct: 457 VPKSFEHLTCIEELYLDDCINLKKLDATCAGMKALRILSLSGCENLEDIPLRLKNLSKLE 516

Query: 762 ------CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSW-NRPK 813
                 CK LK       GL SL ++  SGC +L+ V  +   +  L E+ L+   N  K
Sbjct: 517 KFNFSNCKKLKIAHDAFEGLTSLNLLALSGCDQLEVVPRSFEDLTYLKELYLNDCINLKK 576

Query: 814 MQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKNVDKCMKLSTT 857
           +  D  CV   A+  ++ L   E L +     KN+ K   LS T
Sbjct: 577 L--DATCVGMKALRILSLLG-CENLEEMPLRLKNLSKLENLSLT 617


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 25/285 (8%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L L    I E+P S+  L  L+ L L     +  +P ++S+L  L+ L+LS   ++K
Sbjct: 94  LKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIK 153

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC----------------- 109
           + P  +A++ +L +L L G  I E+P  +  L  L+ L+LN+                  
Sbjct: 154 EIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQ 213

Query: 110 -----KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
                  +  +P S+  L +L+ L L+   +++ +PD+L K+ SL++LD++   I     
Sbjct: 214 LYLYNNQIKEIPDSLAALSNLQRLQLN-FNRIKKIPDSLAKLASLQQLDLNINQISEIPD 272

Query: 165 SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
           S   +KNL+ L            S+        L   S  +  +  S   + SL +L+LS
Sbjct: 273 SFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLS 332

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
              + E  IP     L +L++LYL  N    +P S++ L+NL++L
Sbjct: 333 HNKIEE--IPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQL 375



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 47/329 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++ +L  LYL    I E+P S+  L+ L+ L L                         
Sbjct: 205 LAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQL------------------------- 239

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++KK P  +A +  L +L L+   I+E+P S   L  L+ L L     + ++P S  
Sbjct: 240 NFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLG-SNQIKKIPDSFG 298

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ LNL G  +++ +PD+ GK+ SL++L++S   I     S   + NL+ LY    
Sbjct: 299 KLASLQQLNL-GSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYL--Y 355

Query: 181 NEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           N P       L    NL  LG SS  +  +  SL  + +L +LD+S   + E  IP  + 
Sbjct: 356 NNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKE--IPDSLA 413

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            L  L+ L L+      +P  +S L+NL++L L        + +IP +  FV+       
Sbjct: 414 ALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNL----SFNQIKKIPDS--FVK------- 460

Query: 299 VTLFGALKLCRSKYTII-NCIDSLKLLRK 326
           +    AL LC ++ T I + +++L  L+K
Sbjct: 461 LASLQALYLCSNQITKIPSFLENLPALQK 489



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 142/278 (51%), Gaps = 13/278 (4%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTL------KGCKNLSSLPVTISSLKCLR 55
           A+ ++ ++L L G ++  +P +I  L  LE L L          NL +LP   + L+ L+
Sbjct: 13  AAAEEWTELDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLK 72

Query: 56  TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRL 115
            LE   C+ L+  P I+     L +L L    I E+P S+  L  L+ L L+    +  +
Sbjct: 73  RLEWP-CNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEI 131

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           P S++ L +L+ L+LS   +++ +PD+L  + +L++L + G  I+     +  + +L+ L
Sbjct: 132 PDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQL 191

Query: 176 YF--SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           +   +G  E P S +  ++L    L  +   +  +  SL  + +L +L L+   + +  I
Sbjct: 192 HLNDTGIKEIPDSLAALVNLQQLYLYNNQ--IKEIPDSLAALSNLQRLQLNFNRIKK--I 247

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           P  +  L SL++L LN N    +P S + L NL++L+L
Sbjct: 248 PDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDL 285



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 37/286 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A +  L  L L+   I+E+P S   L  L+ L L G   +  +P +   L  L+ L L 
Sbjct: 251 LAKLASLQQLDLNINQISEIPDSFATLKNLQKLDL-GSNQIKKIPDSFGKLASLQQLNL- 308

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--NECKNLVRLPSS 118
           G +++KK P     +  L +L L    I E+P S   L  L+ LYL  N  K    +P S
Sbjct: 309 GSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIK---EVPDS 365

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  L +L+ L  S   +++ +PD+L  + +L++LD+S   I+    S+  + +L++    
Sbjct: 366 LATLVNLQQLGFS-SNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQN---- 420

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                              LG SS  +  +   L+ + +L +L+LS   + +  IP    
Sbjct: 421 -------------------LGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKK--IPDSFV 459

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
            L SL+ LYL  N    +P+ +  L  L++L+L    RL  +P  P
Sbjct: 460 KLASLQALYLCSNQITKIPSFLENLPALQKLDL----RLNPIPVSP 501



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 2/158 (1%)

Query: 656 EFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
           +FP + Q+      I+E+  ++  L  L QL L+    ++ +P ++SAL  L  L+LS  
Sbjct: 90  KFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSAN 149

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
            + +E P+  ++   L ++ L G  I+ +P  +  L      +L D   +K +P ++  L
Sbjct: 150 HQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDT-GIKEIPDSLAAL 208

Query: 776 RSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPK 813
            +L+ +Y    +++K + ++L  + +L+    ++NR K
Sbjct: 209 VNLQQLYLYN-NQIKEIPDSLAALSNLQRLQLNFNRIK 245


>gi|21655201|gb|AAM28915.1| NBS [Pinus taeda]
          Length = 416

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 140/314 (44%), Gaps = 64/314 (20%)

Query: 17  ITEVPSSIELLTGLELLT----LKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           ++ +P SI  L  LE       L G  NL+ LPV    L+ L+ L L+ CSK+K  P+  
Sbjct: 147 LSNIPGSIGRLKHLERFVVGKYLSGQVNLTELPVEFCHLQSLKALVLTECSKIKSLPEFG 206

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           A +  L  + L    ++  +P S+  L  L L+ L++C +LV LP +I  L+ L+ ++L 
Sbjct: 207 ALLMWLRHIDLSFCRNLERLPDSLHYLSHLRLINLSDCHDLVTLPDNIGRLRCLQHIDLQ 266

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
           GC  LE +PD+ G++  L  +++SG   ++R   S   ++ L+ +   GC+         
Sbjct: 267 GCHNLERLPDSFGELTDLRHINLSGCHDLQRLPDSFGKLRYLQHIDLHGCHSLEG----- 321

Query: 191 LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
             LP                S   + +L  ++LS+C                        
Sbjct: 322 --LPI---------------SFGDLMNLEYINLSNC------------------------ 340

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQFVRANGCSSLVTLFGALKL 307
           +N   LP SI  L +L  ++L  C  L+ LP   +    L+++   GCS+L+        
Sbjct: 341 HNLERLPESIGNLSDLRHIDLSGCHNLERLPDNFRELEELRYLDVEGCSNLII------- 393

Query: 308 CRSKYTIINCIDSL 321
              ++ II   D+L
Sbjct: 394 --DRFEIIGISDNL 405



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   +  +P +I  L  L+ + L+GC NL  LP +   L  LR + LSGC  L++ P   
Sbjct: 243 DCHDLVTLPDNIGRLRCLQHIDLQGCHNLERLPDSFGELTDLRHINLSGCHDLQRLPDSF 302

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             +  L  + L G  S+  +P S   L  LE + L+ C NL RLP SI  L  L+ ++LS
Sbjct: 303 GKLRYLQHIDLHGCHSLEGLPISFGDLMNLEYINLSNCHNLERLPESIGNLSDLRHIDLS 362

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTA 158
           GC  LE +PD   ++E L  LDV G +
Sbjct: 363 GCHNLERLPDNFRELEELRYLDVEGCS 389



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 2/167 (1%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++  +P S+  L+ L L+ L  C +L +LP  I  L+CL+ ++L GC  L++ P     +
Sbjct: 222 NLERLPDSLHYLSHLRLINLSDCHDLVTLPDNIGRLRCLQHIDLQGCHNLERLPDSFGEL 281

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            DL  + L G   +  +P S   L  L+ + L+ C +L  LP S   L +L+ +NLS C 
Sbjct: 282 TDLRHINLSGCHDLQRLPDSFGKLRYLQHIDLHGCHSLEGLPISFGDLMNLEYINLSNCH 341

Query: 135 KLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGC 180
            LE +P+++G +  L  +D+SG   + R   +   ++ LR L   GC
Sbjct: 342 NLERLPESIGNLSDLRHIDLSGCHNLERLPDNFRELEELRYLDVEGC 388



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 2/148 (1%)

Query: 11  YLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           YL G  ++TE+P     L  L+ L L  C  + SLP   + L  LR ++LS C  L++ P
Sbjct: 168 YLSGQVNLTELPVEFCHLQSLKALVLTECSKIKSLPEFGALLMWLRHIDLSFCRNLERLP 227

Query: 70  QIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
             +  +  L  + L D   +  +P +I  L  L+ + L  C NL RLP S   L  L+ +
Sbjct: 228 DSLHYLSHLRLINLSDCHDLVTLPDNIGRLRCLQHIDLQGCHNLERLPDSFGELTDLRHI 287

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSG 156
           NLSGC  L+ +PD+ GK+  L+ +D+ G
Sbjct: 288 NLSGCHDLQRLPDSFGKLRYLQHIDLHG 315



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 2/169 (1%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           + I  +P    LL  L  + L  C+NL  LP ++  L  LR + LS C  L   P  +  
Sbjct: 197 SKIKSLPEFGALLMWLRHIDLSFCRNLERLPDSLHYLSHLRLINLSDCHDLVTLPDNIGR 256

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L  + L G  ++  +P S   L  L  + L+ C +L RLP S   L+ L+ ++L GC
Sbjct: 257 LRCLQHIDLQGCHNLERLPDSFGELTDLRHINLSGCHDLQRLPDSFGKLRYLQHIDLHGC 316

Query: 134 CKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCN 181
             LE +P + G + +LE +++S    + R   SI  + +LR +  SGC+
Sbjct: 317 HSLEGLPISFGDLMNLEYINLSNCHNLERLPESIGNLSDLRHIDLSGCH 365



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 1/140 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD  D+  L   I  L  L  + L GC NLERLP +   L  L  +NLSG    +  P+
Sbjct: 241 LSDCHDLVTLPDNIGRLRCLQHIDLQGCHNLERLPDSFGELTDLRHINLSGCHDLQRLPD 300

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                  L  I L G  ++ GLP S   L      NL +C NL+ LP +I  L  LR + 
Sbjct: 301 SFGKLRYLQHIDLHGCHSLEGLPISFGDLMNLEYINLSNCHNLERLPESIGNLSDLRHID 360

Query: 783 PSGCSKLKNVTETLGKVESL 802
            SGC  L+ + +   ++E L
Sbjct: 361 LSGCHNLERLPDNFRELEEL 380



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  ++ L  + L G  ++  +P S   LT L  + L GC +L  LP +   L+ L+ ++L
Sbjct: 254 IGRLRCLQHIDLQGCHNLERLPDSFGELTDLRHINLSGCHDLQRLPDSFGKLRYLQHIDL 313

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GC  L+  P     + +L  + L    ++  +P SI  L  L  + L+ C NL RLP +
Sbjct: 314 HGCHSLEGLPISFGDLMNLEYINLSNCHNLERLPESIGNLSDLRHIDLSGCHNLERLPDN 373

Query: 119 INGLKSLKTLNLSGCCKL 136
              L+ L+ L++ GC  L
Sbjct: 374 FRELEELRYLDVEGCSNL 391



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 23/141 (16%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL++ + I+ L     LL  L  + L+ C+NLERLP ++  L +L  +NLS        P
Sbjct: 192 VLTECSKIKSLPEFGALLMWLRHIDLSFCRNLERLPDSLHYLSHLRLINLSDCHDLVTLP 251

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           +       L  I L+G                       C NL+ LP +   L  LR + 
Sbjct: 252 DNIGRLRCLQHIDLQG-----------------------CHNLERLPDSFGELTDLRHIN 288

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            SGC  L+ + ++ GK+  L+
Sbjct: 289 LSGCHDLQRLPDSFGKLRYLQ 309



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 5/158 (3%)

Query: 650 LWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLT----LNGCKNLERLPRTISALK 705
           LWE+  + P  ++ L     +  +  +I  L  L +      L+G  NL  LP     L+
Sbjct: 127 LWEDDSQPPLQLRELEINAPLSNIPGSIGRLKHLERFVVGKYLSGQVNLTELPVEFCHLQ 186

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKN 764
            L  L L+  SK +  PE  +    L  I L     +  LP S+  LS   L NL DC +
Sbjct: 187 SLKALVLTECSKIKSLPEFGALLMWLRHIDLSFCRNLERLPDSLHYLSHLRLINLSDCHD 246

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L +LP  I  LR L+ +   GC  L+ + ++ G++  L
Sbjct: 247 LVTLPDNIGRLRCLQHIDLQGCHNLERLPDSFGELTDL 284


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 141/282 (50%), Gaps = 21/282 (7%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L++LYL G  +T VP+ I  L  L  L L     L+++P  I  L+  R   LSG ++L 
Sbjct: 428 LTELYLYGNQLTSVPAEIGQLRSLTELNLS-SNQLTNVPAEIGQLRSRREFGLSG-NQLT 485

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P  +  +  L +  L G  +  VP+ I  L  LE L+L + K L  +P+ I  L++L+
Sbjct: 486 SVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNK-LTSVPAEIGRLRALE 544

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEPP 184
            L L G  +L +VP  +G++ SLE+LD+    +      +  + +L SL          P
Sbjct: 545 WLYLHGN-QLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVP 603

Query: 185 A-----SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           A     ++ W L L  N L  +S P  +       + SL +L L+   L   ++P++I  
Sbjct: 604 AEIGQLTSLWELWLHDNEL--TSVPAEIW-----QLTSLRELSLAVNQL--TSVPAEIGQ 654

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L SLK L L  N   ++PA I  L +LE L+L+D K L S+P
Sbjct: 655 LTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNK-LTSVP 695



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 148/308 (48%), Gaps = 34/308 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL G  +T VP+ +  LT LE L L+    L+S+PV +  L  L +L L 
Sbjct: 537 IGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQ-HNQLTSVPVEVGQLTSLMSLNL- 594

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +  L +L+L    +  VP+ I  L  L  L L     L  +P+ I 
Sbjct: 595 GNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSL-AVNQLTSVPAEIG 653

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSG 179
            L SLKTL L G  +L +VP  +G++ SLE LD+    +   P   +  + +L SL   G
Sbjct: 654 QLTSLKTLELGGN-QLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLEL-G 711

Query: 180 CNEPPASASW-----------HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCG 227
            N      SW            L L  N L  S       +P+  G + SL  LDL    
Sbjct: 712 DNH---LTSWPEEIGQLTSLKELTLRGNKLTTS-------VPAEIGQLTSLKTLDLRCNQ 761

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           L   ++P++I  L SL+ L+LN N   ++PA +  L +LE L L+  +    L  +P  +
Sbjct: 762 L--TSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKGNQ----LTIVPAEI 815

Query: 288 QFVRANGC 295
           + ++A GC
Sbjct: 816 RELKAAGC 823



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 140/292 (47%), Gaps = 10/292 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L + G ++T VP+ I LLT L  L L G + L+S+P  I  L  +  L L+
Sbjct: 261 VGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNR-LTSVPEEIGQLTAMTELYLN 319

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L  L L G  +  VP+ I  L  L+ L LN  + L  +P+ I 
Sbjct: 320 -ANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQ-LTSVPAEIG 377

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL +L+L G  +L +VP  +G++ ++ EL ++   +    + I+ +  L  LY  G 
Sbjct: 378 QLTSLISLHL-GKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGN 436

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                 A          L  SS  +  +   +  + S  +  LS   L   ++P++I  L
Sbjct: 437 QLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQL--TSVPAEIGQL 494

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            SL+E  L+ N   ++PA I  L +LE L LED K    L  +P  +  +RA
Sbjct: 495 TSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNK----LTSVPAEIGRLRA 542



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 141/299 (47%), Gaps = 31/299 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLEL 59
           +  +  L  L L G  +T VP+ I  LT LE L L   K L+S+P  I   L  L +LEL
Sbjct: 652 IGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNK-LTSVPADILQQLTSLESLEL 710

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSI-AEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            G + L  +P+ +  +  L +L L G  +   VP+ I  L  L+ L L  C  L  +P+ 
Sbjct: 711 -GDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLR-CNQLTSVPAE 768

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  L SL+ L L+   +L +VP  LG++ SLE L + G  +        +   +R L  +
Sbjct: 769 IGQLTSLRWLWLND-NRLTSVPAELGQLTSLEGLWLKGNQL------TIVPAEIRELKAA 821

Query: 179 GC-------------NEPPASASWHLHLPFNLLG---KSSCPVALMLPSLTGVCSLTKLD 222
           GC             ++  A  +W    P +L G   +   P      ++     + +L+
Sbjct: 822 GCRVDLDDGVTMDEGDDARALRTWRAMCP-DLQGMWPEDEQPEDWYRVTMENDGRVVQLE 880

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L   GL   A+P+++  L +L+ L L+ N   +LPA I  L +LE L L +  +L S+P
Sbjct: 881 LEVFGL-TGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTE-NQLTSVP 937



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 29/254 (11%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           ++P  +  L  LR L + G + L   P  +  +  L +L+L G  +  VP  I  L  + 
Sbjct: 256 AVPAEVGRLTALREL-VVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMT 314

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
            LYLN    L  LP  I  L+SL+ L L G  +L +VP  + ++ SL+ LD++   +   
Sbjct: 315 ELYLN-ANQLTSLPVEIGQLRSLEMLQLGGN-QLTSVPAEIRQLTSLKCLDLNNNQLTSV 372

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
            + I  + +L SL                HL  N L  +S P       +  + ++T+L 
Sbjct: 373 PAEIGQLTSLISL----------------HLGKNQL--TSVPA-----EIGQLTAMTELY 409

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L+   L   ++P++I  L  L ELYL  N   ++PA I  L +L EL L    +L ++P 
Sbjct: 410 LNANQL--TSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNL-SSNQLTNVPA 466

Query: 283 IPPNLQFVRANGCS 296
               L+  R  G S
Sbjct: 467 EIGQLRSRREFGLS 480



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  +  L  LYL    +T VP+ I  LT L  L L   + L+S+P  I  L  L  LEL 
Sbjct: 917  IGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQ-LTSVPAEIGQLTALARLELR 975

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
              ++L   P  +  +  L KL LD   +  VP+ I  L  L+ L L++   L  +P+ I 
Sbjct: 976  D-NQLTSLPAEIGQLAALEKLSLDSNQLTSVPAEIGQLTSLKTLGLSD-NMLTSVPADIG 1033

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
             L SLK L L G  +L +VP+ +G++ SL+ L
Sbjct: 1034 QLTSLKELRLGG-NQLTSVPEEIGQLTSLQGL 1064



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 110/266 (41%), Gaps = 60/266 (22%)

Query: 30   LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
            LE+  L G     ++P  +  L  LR L L G +++   P  +  +  L  LYL    + 
Sbjct: 881  LEVFGLTG-----AVPAELGRLSALRWLSLHG-NQVTSLPAEIGQLTSLEVLYLTENQLT 934

Query: 90   EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
             VP+ I  L  L  LYL E + L  +P+ I  L +L  L L    +L ++P  +G++ +L
Sbjct: 935  SVPAEIGQLTSLRELYLYENQ-LTSVPAEIGQLTALARLELRD-NQLTSLPAEIGQLAAL 992

Query: 150  EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
            E+L +    +    + I  + +L++L  S                 N+L           
Sbjct: 993  EKLSLDSNQLTSVPAEIGQLTSLKTLGLSD----------------NML----------- 1025

Query: 210  PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
                                  ++P+DI  L SLKEL L  N   ++P  I  L +L+ L
Sbjct: 1026 ---------------------TSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGL 1064

Query: 270  ELEDCKRLQSLPQIPPNLQFVRANGC 295
             L   +    L  +P  ++ +RA GC
Sbjct: 1065 YLWQNR----LTSVPAAIRELRAVGC 1086



 Score = 39.3 bits (90), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 82/200 (41%), Gaps = 40/200 (20%)

Query: 641 PQEPGNCSRLWE---EADEFPDIVQVLSDGTDIRELSLA----------IELLFGLVQLT 687
           P E G  + LWE     +E   +   +   T +RELSLA          I  L  L  L 
Sbjct: 603 PAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLE 662

Query: 688 LNGCKNLERLPRTISALKYLSTLNLS-----------------------GLSKFREFPEI 724
           L G + L  +P  I  L  L TL+L                        G +    +PE 
Sbjct: 663 LGGNQ-LTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEE 721

Query: 725 TSSRDQLLEIHLEGTAI-RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                 L E+ L G  +   +PA I  L+     +L+ C  L S+P+ I  L SLR ++ 
Sbjct: 722 IGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLR-CNQLTSVPAEIGQLTSLRWLWL 780

Query: 784 SGCSKLKNVTETLGKVESLE 803
           +  ++L +V   LG++ SLE
Sbjct: 781 ND-NRLTSVPAELGQLTSLE 799


>gi|13517464|gb|AAK28803.1|AF310958_1 resistance-like protein P1-A [Linum usitatissimum]
          Length = 1200

 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 179/381 (46%), Gaps = 59/381 (15%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ EVPS ++ LT L  L +  CKNL  LP  + S K L+ + + G   + + P+I +  
Sbjct: 714  SLVEVPSDVQYLTKLVTLDISHCKNLKPLPPKLDS-KLLKHVRMQGLG-ITRCPEIDS-- 769

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS-LKTLNLSGCC 134
             +L +  L GTS+ E+PS+I  +    +L L+  KN+ + P    G+ + LK  +L G  
Sbjct: 770  RELEEFGLSGTSLGELPSAIYNVKQNGVLRLH-GKNITKFP----GITTILKFFSLGGT- 823

Query: 135  KLENVPDTLGKVESLEELD-VSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHL 191
                         S+ E+D  +    +  TS   L+    +L+ +G    E   ++ W++
Sbjct: 824  -------------SIREIDHFADYHQQHQTSDGLLLPRFHNLWLTGNRQLEVLPNSIWNM 870

Query: 192  HLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                  + +S  P+   LP ++  + +LT L++ DC     +IP+ I NL SL+ LYL  
Sbjct: 871  ISEGLFICRS--PLIESLPEISEPMNTLTSLEVVDCR-SLTSIPTSISNLRSLRSLYLVE 927

Query: 251  NNFVTLPASISGLLNLEELELEDCKRLQ------------------------SLPQIPPN 286
                +LP+SI  L  L  ++L DCK L+                        SLP++PPN
Sbjct: 928  TGIKSLPSSIQELRQLYSIDLRDCKSLESIPNSIHKLSKLVTFSMSGCESIPSLPELPPN 987

Query: 287  LQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP 346
            L+ +  + C SL  L      C+  Y  +N I   +  + +  + + L     + A   P
Sbjct: 988  LKELDVSRCKSLQAL--PSNTCKLWY--LNRIYFEECPQLDQTSPAELMANFLVHASLSP 1043

Query: 347  GHKLSIVFPGSQIPKWFMYQN 367
             ++  +   GS++P+WF Y++
Sbjct: 1044 SYERQVRCSGSELPEWFSYRS 1064



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 10/176 (5%)

Query: 9    DLYLDGTSITEV-PSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKL 65
            +L+L G    EV P+SI  +    L     C++  + SLP     +  L +LE+  C  L
Sbjct: 851  NLWLTGNRQLEVLPNSIWNMISEGLFI---CRSPLIESLPEISEPMNTLTSLEVVDCRSL 907

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
               P  ++++  L  LYL  T I  +PSSI+ L  L  + L +CK+L  +P+SI+ L  L
Sbjct: 908  TSIPTSISNLRSLRSLYLVETGIKSLPSSIQELRQLYSIDLRDCKSLESIPNSIHKLSKL 967

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
             T ++SGC   E++P       +L+ELDVS   +++   S+   +  L  +YF  C
Sbjct: 968  VTFSMSGC---ESIPSLPELPPNLKELDVSRCKSLQALPSNTCKLWYLNRIYFEEC 1020



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +++++ L  LYL  T I  +PSSI+ L  L  + L+ CK+L S+P +I  L  L T  +S
Sbjct: 914  ISNLRSLRSLYLVETGIKSLPSSIQELRQLYSIDLRDCKSLESIPNSIHKLSKLVTFSMS 973

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL 112
            GC  +   P++  ++++L        S+  +PS+   L  L  +Y  EC  L
Sbjct: 974  GCESIPSLPELPPNLKELD--VSRCKSLQALPSNTCKLWYLNRIYFEECPQL 1023



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 15/167 (8%)

Query: 653 EADEFPDIVQV--LSDG-----------TDIRELSLAIELLFGLVQLTLNGCKN--LERL 697
           E D F D  Q    SDG           T  R+L +    ++ ++   L  C++  +E L
Sbjct: 827 EIDHFADYHQQHQTSDGLLLPRFHNLWLTGNRQLEVLPNSIWNMISEGLFICRSPLIESL 886

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P     +  L++L +         P   S+   L  ++L  T I+ LP+SI+ L      
Sbjct: 887 PEISEPMNTLTSLEVVDCRSLTSIPTSISNLRSLRSLYLVETGIKSLPSSIQELRQLYSI 946

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +L+DCK+L+S+P++I+ L  L     SGC  + ++ E    ++ L+V
Sbjct: 947 DLRDCKSLESIPNSIHKLSKLVTFSMSGCESIPSLPELPPNLKELDV 993



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 26/126 (20%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I+ L  +I+ L  L  + L  CK+LE +P +I  L  L T ++SG       PE    
Sbjct: 928  TGIKSLPSSIQELRQLYSIDLRDCKSLESIPNSIHKLSKLVTFSMSGCESIPSLPE---- 983

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                            LP +++ L      ++  CK+L++LPS    L  L  +Y   C 
Sbjct: 984  ----------------LPPNLKEL------DVSRCKSLQALPSNTCKLWYLNRIYFEECP 1021

Query: 788  KLKNVT 793
            +L   +
Sbjct: 1022 QLDQTS 1027


>gi|297811235|ref|XP_002873501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319338|gb|EFH49760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 161/375 (42%), Gaps = 94/375 (25%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  ++ E+P      T L+ L L  C +L  LP +I +   L+ L L  CS + +F    
Sbjct: 603 DSANLKELPD-FSTATNLQKLNLSYCSSLIKLPSSIGNATNLKKLNLRRCSNIMEF---- 657

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
                              PS IE    LE+L L+ C NLV LP  I  L+ L+ L L G
Sbjct: 658 -------------------PSFIEKATNLEILDLSSCSNLVELPLFIKNLQKLQKLRLGG 698

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASW 189
           C KL+ +P  +  +ESL ELD++  +  +    I    N+R L  S       PP+ A W
Sbjct: 699 CSKLQVLPTNIN-LESLVELDLTDCSALKLFPEI--STNVRVLKLSETAIEEVPPSIAFW 755

Query: 190 ----HLHLPF--NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                LH+ +  NL      P AL        CS+T L LSD  + E             
Sbjct: 756 PRLDELHMSYFENL---KELPHAL--------CSITDLYLSDTEIQE------------- 791

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-- 301
                       +P+ +  +  L+ L L+ C++L+SLPQIP +L  + A  C SL  L  
Sbjct: 792 ------------VPSLVKRISRLDRLVLKGCRKLESLPQIPESLSIIDAEDCESLERLDC 839

Query: 302 -FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIP 360
            F   K+         C+   K  + N  A  ++        +  P  + +I+ PG ++P
Sbjct: 840 SFHNPKI---------CLKFAKCFKLNQEAKDLI--------IQTPTSEHAIL-PGGEVP 881

Query: 361 KWFMYQN-EGSSITV 374
            +F +++  G S+T+
Sbjct: 882 SYFTHRSTSGGSLTI 896



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 40/195 (20%)

Query: 656 EFPDIVQV--------LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           EFP  ++         LS  +++ EL L I+ L  L +L L GC  L+ LP  I+ L+ L
Sbjct: 656 EFPSFIEKATNLEILDLSSCSNLVELPLFIKNLQKLQKLRLGGCSKLQVLPTNIN-LESL 714

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL------LSGNILSNLKD 761
             L+L+  S  + FPEI+++   L    L  TAI  +P SI        L  +   NLK+
Sbjct: 715 VELDLTDCSALKLFPEISTNVRVL---KLSETAIEEVPPSIAFWPRLDELHMSYFENLKE 771

Query: 762 CKN--------------LKSLPSTINGLRSLRMMYPSGCSKLKN---VTETLGKV----- 799
             +              ++ +PS +  +  L  +   GC KL++   + E+L  +     
Sbjct: 772 LPHALCSITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIPESLSIIDAEDC 831

Query: 800 ESLEVRLSSWNRPKM 814
           ESLE    S++ PK+
Sbjct: 832 ESLERLDCSFHNPKI 846



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 11/105 (10%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           ++DLYL  T I EVPS ++ ++ L+ L LKGC+ L SLP    SL     ++   C  L+
Sbjct: 779 ITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIPESLS---IIDAEDCESLE 835

Query: 67  KF------PQIVASMEDLSKLYLDGTS-IAEVPSSIE-LLPGLEL 103
           +       P+I        KL  +    I + P+S   +LPG E+
Sbjct: 836 RLDCSFHNPKICLKFAKCFKLNQEAKDLIIQTPTSEHAILPGGEV 880



 Score = 46.2 bits (108), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%)

Query: 660 IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR 719
           +V+++ D + + +L   I+ L  L ++ +    NL+ LP   S    L  LNLS  S   
Sbjct: 573 LVELIMDNSKLEKLWEGIKPLRNLKRMDMRDSANLKELP-DFSTATNLQKLNLSYCSSLI 631

Query: 720 EFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           + P    +   L +++L   + I   P+ IE  +   + +L  C NL  LP  I  L+ L
Sbjct: 632 KLPSSIGNATNLKKLNLRRCSNIMEFPSFIEKATNLEILDLSSCSNLVELPLFIKNLQKL 691

Query: 779 RMMYPSGCSKLK 790
           + +   GCSKL+
Sbjct: 692 QKLRLGGCSKLQ 703



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 57/146 (39%), Gaps = 43/146 (29%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L  T+I EVP SI     L+ L +   +NL  LP  + S                   
Sbjct: 738 LKLSETAIEEVPPSIAFWPRLDELHMSYFENLKELPHALCS------------------- 778

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
                   ++ LYL  T I EVPS ++ +  L+ L L  C+ L  LP      +SL  ++
Sbjct: 779 --------ITDLYLSDTEIQEVPSLVKRISRLDRLVLKGCRKLESLPQIP---ESLSIID 827

Query: 130 LSGCCKLENVPDTLGKVESLEELDVS 155
              C             ESLE LD S
Sbjct: 828 AEDC-------------ESLERLDCS 840


>gi|30684793|ref|NP_849410.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658793|gb|AEE84193.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 5/177 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++  K+L  L L+G +  ++  S++ +  L  L L+ C +L SLP     +K L+TL LS
Sbjct: 650 LSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILS 708

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GC KLK F  I  S+E    L+L+GT+I  V   IE L  L LL L  C+ L  LP+ + 
Sbjct: 709 GCLKLKDFHIISESIE---SLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLY 765

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            LKSL+ L LSGC  LE++P    K+E LE L + GT+I++ T  +  + NL+   F
Sbjct: 766 KLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQ-TPEMSCLSNLKICSF 821



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 4/139 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L  C +LE LP+    +K L TL LSG  K ++F  I+ S + L   HLEGTAI 
Sbjct: 679 LIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIESL---HLEGTAIE 734

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +   IE L   IL NLK+C+ LK LP+ +  L+SL+ +  SGCS L+++     K+E L
Sbjct: 735 RVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECL 794

Query: 803 EVRLSSWNRPKMQNDFDCV 821
           E+ L      K   +  C+
Sbjct: 795 EILLMDGTSIKQTPEMSCL 813



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 10/137 (7%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           +  L+L+GT+I  V   IE L  L LL LK C+ L  LP  +  LK L+ L LSGCS L+
Sbjct: 723 IESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALE 782

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P I   ME L  L +DGTSI + P  +  L  L++     C+ ++   + +       
Sbjct: 783 SLPPIKEKMECLEILLMDGTSIKQTP-EMSCLSNLKICSF--CRPVIDDSTGL------- 832

Query: 127 TLNLSGCCKLENVPDTL 143
            L+  GC  LENV   L
Sbjct: 833 YLDAHGCGSLENVSKPL 849



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 61/331 (18%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           L LSG S+ K          +L +L L+G +  ++  S++ +  L  L L +C +L  LP
Sbjct: 645 LNLSGLSRAK----------NLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLP 694

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
                +KSLKTL LSGC KL++        ES+E L + GTAI R    I   ++L SL 
Sbjct: 695 KGFK-IKSLKTLILSGCLKLKDFHII---SESIESLHLEGTAIERVVEHI---ESLHSLI 747

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
                               LL   +C     LP+ L  + SL +L LS C   E+ +P 
Sbjct: 748 --------------------LLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALES-LPP 786

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRANG 294
             + +  L+ L ++  +    P  +S L NL+      C+     P I  +   ++ A+G
Sbjct: 787 IKEKMECLEILLMDGTSIKQTP-EMSCLSNLKICSF--CR-----PVIDDSTGLYLDAHG 838

Query: 295 CSSLVTLFGALKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH 348
           C SL  +   L +        + +   +C    +  +++ +A + L+  L  +      H
Sbjct: 839 CGSLENVSKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHNH 898

Query: 349 K-------LSIVFPGSQIPKWFMYQNEGSSI 372
           K       +++ FPG  IP WF +Q  GS I
Sbjct: 899 KGLLLDPLVAVCFPGHDIPSWFSHQKMGSLI 929



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 26/176 (14%)

Query: 646 NCSRLWEEADEFPDIV----------QVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLE 695
            CS++    D FPD +            L    D +EL + + L +  ++      KN E
Sbjct: 576 QCSKV---PDHFPDELVYLHWQGYPYDCLPSDFDPKEL-VDLSLRYSHIKQLWEDEKNTE 631

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
            L R +   +    LNLSGLS+ +           L  + LEG     L  S++ ++  I
Sbjct: 632 SL-RWVDLGQSKDLLNLSGLSRAK----------NLERLDLEGCTSLDLLGSVKQMNELI 680

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
             NL+DC +L+SLP     ++SL+ +  SGC KLK+       +ESL +  ++  R
Sbjct: 681 YLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIESLHLEGTAIER 735


>gi|15235064|ref|NP_193688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2853080|emb|CAA16930.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268749|emb|CAB78955.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|332658795|gb|AEE84195.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1167

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 45/354 (12%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           LR ++L+  SKL+    +  ++ +L +L L+G T++  +    E +  L  L L  C  L
Sbjct: 667 LRWVDLNHSSKLENLSGLSQAL-NLERLNLEGCTALKTLLLGPENMASLVFLNLKGCTGL 725

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP  IN L+SLKTL LS C  LE   +     E+L  L + GTAI+     +  + +L
Sbjct: 726 ESLPK-IN-LRSLKTLILSNCSNLE---EFWVISETLYTLYLDGTAIKTLPQDMVKLTSL 780

Query: 173 RSLYFSGCNEPPASASWHLHLP-----FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
             LY   C          + LP       +L +  C     L SL  V  +  +      
Sbjct: 781 VKLYMKDC-------EMLVKLPEEFDKLKVLQELVCSGCKRLSSLPDV--MKNMQCLQIL 831

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLPQIPPN 286
           L +    + I ++ SL+ L L+RN  ++ L   I  L  L+ L+L+ C +L S+P++P N
Sbjct: 832 LLDGTAITKIPHISSLERLCLSRNEKISCLSNDIRLLSQLKWLDLKYCTKLVSIPELPTN 891

Query: 287 LQFVRANGCSSLVTLFGAL------KLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL 340
           LQ + ANGC SL T+   L      +   S +   NC D L    K G            
Sbjct: 892 LQCLDANGCESLTTVANPLATHLPTEQIHSTFIFTNC-DKLDRTAKEGFV---------- 940

Query: 341 QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
                P    S  FPG ++P WF ++  GS + +    + +N N+ VG A+C V
Sbjct: 941 -----PEALFSTCFPGCEVPSWFCHEAVGSVLKLNLLPH-WNENRFVGIALCAV 988



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 6/157 (3%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L L+G T++  +    E +  L  L LKGC  L SLP    +L+ L+TL LS CS 
Sbjct: 689 NLERLNLEGCTALKTLLLGPENMASLVFLNLKGCTGLESLPKI--NLRSLKTLILSNCSN 746

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L++F  I    E L  LYLDGT+I  +P  +  L  L  LY+ +C+ LV+LP   + LK 
Sbjct: 747 LEEFWVIS---ETLYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEFDKLKV 803

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           L+ L  SGC +L ++PD +  ++ L+ L + GTAI +
Sbjct: 804 LQELVCSGCKRLSSLPDVMKNMQCLQILLLDGTAITK 840



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 12/186 (6%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  LYLDGT+I  +P  +  LT L  L +K C+ L  LP     LK L+ L  SGC +L 
Sbjct: 757 LYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEFDKLKVLQELVCSGCKRLS 816

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P ++ +M+ L  L LDGT+I ++P     +  LE L L+  + +  L + I  L  LK
Sbjct: 817 SLPDVMKNMQCLQILLLDGTAITKIPH----ISSLERLCLSRNEKISCLSNDIRLLSQLK 872

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLY-FSGCN 181
            L+L  C KL ++P+      +L+ LD +G    T +  P ++    + + S + F+ C+
Sbjct: 873 WLDLKYCTKLVSIPEL---PTNLQCLDANGCESLTTVANPLATHLPTEQIHSTFIFTNCD 929

Query: 182 EPPASA 187
           +   +A
Sbjct: 930 KLDRTA 935



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L L  E +  LV L L GC  LE LP+    L+ L TL LS  S   EF  I+ +
Sbjct: 699 TALKTLLLGPENMASLVFLNLKGCTGLESLPKI--NLRSLKTLILSNCSNLEEFWVISET 756

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L  ++L+GTAI+ LP  +  L+  +   +KDC+ L  LP   + L+ L+ +  SGC 
Sbjct: 757 ---LYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEFDKLKVLQELVCSGCK 813

Query: 788 KLKNVTETLGKVESLEVRL 806
           +L ++ + +  ++ L++ L
Sbjct: 814 RLSSLPDVMKNMQCLQILL 832



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 71/176 (40%), Gaps = 31/176 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NCS L    +EF  I + L     DGT I+ L   +  L  LV+L +  C+ L +LP   
Sbjct: 743 NCSNL----EEFWVISETLYTLYLDGTAIKTLPQDMVKLTSLVKLYMKDCEMLVKLPEEF 798

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA--------------- 746
             LK L  L  SG  +    P++  +   L  + L+GTAI  +P                
Sbjct: 799 DKLKVLQELVCSGCKRLSSLPDVMKNMQCLQILLLDGTAITKIPHISSLERLCLSRNEKI 858

Query: 747 -----SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
                 I LLS     +LK C  L S+P     L+ L     +GC  L  V   L 
Sbjct: 859 SCLSNDIRLLSQLKWLDLKYCTKLVSIPELPTNLQCLD---ANGCESLTTVANPLA 911



 Score = 39.3 bits (90), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M +M+ L  L LDGT+IT++P     ++ LE L L   + +S L   I  L  L+ L+L 
Sbjct: 822 MKNMQCLQILLLDGTAITKIPH----ISSLERLCLSRNEKISCLSNDIRLLSQLKWLDLK 877

Query: 61  GCSKLKKFPQIVASME 76
            C+KL   P++  +++
Sbjct: 878 YCTKLVSIPELPTNLQ 893


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 150/300 (50%), Gaps = 23/300 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L DL L    +  +P  I  L  L+ L L   + L++LP  I  L+ L+ L+L 
Sbjct: 131 IGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNR-LANLPEEIGKLQNLQELDLE 189

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ + ++++L  L L+G  +  +P  I  L  L+ LYL   + L   P  I 
Sbjct: 190 G-NQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNR-LTTFPKEIE 247

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++LK L+L G  +L  +P  +GK+++L+E+  S   +      I  ++NL+ LY +  
Sbjct: 248 DLQNLKILSL-GNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLA-H 305

Query: 181 NEPPASAS--------WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           N+  A             L+L  N L  ++ P+      +  + +L  L L +  L   A
Sbjct: 306 NQLTALPKEIGNLQNLQQLYLYGNQL--TTLPI-----EIGNLQNLQGLHLGNNKL--TA 356

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            P +I NL  LK L LN+N   T+P  I  L NL+EL L    +L ++P+   NLQ ++ 
Sbjct: 357 FPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNL-SSNQLTTIPKEIENLQNLQV 415



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 30/302 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  LYL    +T  P  IE L  L++L+L G   L++LP  +  L+ L+ ++ S
Sbjct: 223 IGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSL-GNNQLTTLPKEVGKLQNLQEMK-S 280

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ + ++++L +LYL    +  +P  I  L  L+ LYL     L  LP  I 
Sbjct: 281 SKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYL-YGNQLTTLPIEIG 339

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L G  KL   P  +G ++ L+ L ++   +      I  ++NL+ L  S  
Sbjct: 340 NLQNLQGLHL-GNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLS-- 396

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                S  +  +   +  + +L  LDL++  L   A+P +I NL
Sbjct: 397 ---------------------SNQLTTIPKEIENLQNLQVLDLNNNQL--TALPKEIGNL 433

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            +LKEL L  N   TLP  I  L +LE L+L +   L S P+    LQ ++     ++ T
Sbjct: 434 QNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNP-LTSFPEEIGKLQHLKRLRLENIPT 492

Query: 301 LF 302
           L 
Sbjct: 493 LL 494



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 34/216 (15%)

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L+ LP  I  L+ L+ LNL+   +L N+P+ +GK+++L+ELD+ G  +      I  ++N
Sbjct: 147 LMTLPKEIGKLQKLQKLNLTRN-RLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNLQN 205

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGE 230
           L++L   G                             LP   G + +L KL L +  L  
Sbjct: 206 LQTLDLEGNQ------------------------LTTLPKEIGKLQNLKKLYLYNNRL-- 239

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-- 288
              P +I++L +LK L L  N   TLP  +  L NL+E++     +L +LP+   NLQ  
Sbjct: 240 TTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMK-SSKNQLTTLPKEIGNLQNL 298

Query: 289 ---FVRANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
              ++  N  ++L    G L+  +  Y   N + +L
Sbjct: 299 QELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTL 334



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 32/212 (15%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP  I  L++L+ L+LS   +L  +P  +GK++ L++L+++   +      I  ++NL+ 
Sbjct: 127 LPKEIGKLQNLRDLDLS-SNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQE 185

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
           L   G                         +A +   +  + +L  LDL    L    +P
Sbjct: 186 LDLEGNQ-----------------------LATLPEEIGNLQNLQTLDLEGNQL--TTLP 220

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR--- 291
            +I  L +LK+LYL  N   T P  I  L NL+ L L +  +L +LP+    LQ ++   
Sbjct: 221 KEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSLGN-NQLTTLPKEVGKLQNLQEMK 279

Query: 292 --ANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
              N  ++L    G L+  +  Y   N + +L
Sbjct: 280 SSKNQLTTLPKEIGNLQNLQELYLAHNQLTAL 311


>gi|168047550|ref|XP_001776233.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672466|gb|EDQ59003.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 610

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 138/294 (46%), Gaps = 35/294 (11%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +T +P+ +  LT L  L L GC NL+SLP  + +   L  L L  C KL   P  + ++ 
Sbjct: 343 LTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNFTSLAMLNLRRCWKLISLPNELGNLT 402

Query: 77  DLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            L  L L   S +  +P+ +  L  L  L L+ C  L  LP+ +  L SL +LNLS C  
Sbjct: 403 SLISLNLSECSRLTSLPNELGNLISLTFLNLSGCSRLTLLPNELGNLTSLISLNLSECSS 462

Query: 136 LENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
           L ++P  LGK+ SL ELD+ G    T++ +   +I     L SL   GC       S   
Sbjct: 463 LTSLPKELGKLSSLIELDIGGCESLTSLPKELGNI---TTLISLNLEGC-------SSLT 512

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR- 250
            LP                 L  + SLTKLD+  C     ++P ++ NL SL    L   
Sbjct: 513 SLP---------------KELGNLTSLTKLDIRKCS-SLISLPKELGNLTSLSTCNLEGC 556

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           ++ ++LP  +  L +L  L LE C  L SLP    N   L  +R N CS+L +L
Sbjct: 557 SSLISLPKELGNLTSLNTLNLEGCSSLTSLPNELFNFTSLTILRINDCSNLTSL 610



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 1/141 (0%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P  +  L+ L  L + GC++L+SLP  + ++  L +L L GCS L   P+ + +
Sbjct: 461 SSLTSLPKELGKLSSLIELDIGGCESLTSLPKELGNITTLISLNLEGCSSLTSLPKELGN 520

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+KL +   +S+  +P  +  L  L    L  C +L+ LP  +  L SL TLNL GC
Sbjct: 521 LTSLTKLDIRKCSSLISLPKELGNLTSLSTCNLEGCSSLISLPKELGNLTSLNTLNLEGC 580

Query: 134 CKLENVPDTLGKVESLEELDV 154
             L ++P+ L    SL  L +
Sbjct: 581 SSLTSLPNELFNFTSLTILRI 601



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 148/342 (43%), Gaps = 59/342 (17%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK---------- 66
           +T +P+ +  LT L  L L GC NL+SLP  + +L  L  L LS CS+L           
Sbjct: 103 LTSLPNKLGNLTSLTSLNLSGCSNLTSLPNGLGNLTSLIFLNLSRCSRLTLLPNALGNLT 162

Query: 67  --------------KFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKN 111
                           P  + ++  L+ L ++   S+A +P+ +  L  L  L L+ C  
Sbjct: 163 SLTLLNLSECFRLISLPNQLGNLTSLTTLDVENCQSLASLPNELGNLTSLTFLNLSGCSR 222

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPT------ 163
           L  LP+ +  L SL  LNLSGC  L ++P+ LG + SL  +++S     I  P       
Sbjct: 223 LTLLPNELGNLTSLTLLNLSGCSNLTSLPNELGNLTSLTSINLSECLNLISLPNKLGNLT 282

Query: 164 ----------SSIFLMKNLRSLYFSGCNEPPASASWHL-HLP--------FNLLGKSSCP 204
                     S + L+ N              S  W L  LP          LL  S C 
Sbjct: 283 SLTLLNLSECSRLILLPNELG-NLKSLTLLKLSRCWKLISLPNELGNLTSLILLNLSECS 341

Query: 205 VALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISG 262
               LP+ L  + SLT L+LS C     ++P+++ N  SL  L L R    ++LP  +  
Sbjct: 342 RLTSLPNELGNLTSLTSLNLSGCS-NLTSLPNELGNFTSLAMLNLRRCWKLISLPNELGN 400

Query: 263 LLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           L +L  L L +C RL SLP    N   L F+  +GCS L  L
Sbjct: 401 LTSLISLNLSECSRLTSLPNELGNLISLTFLNLSGCSRLTLL 442



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 48/251 (19%)

Query: 58  ELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLP 116
           E++ CSKL   P  + +   L+ L L   S +  +P+ +  L  L  + L+EC NL  LP
Sbjct: 48  EVTKCSKLTSLPNELGNRTSLTSLNLSRCSNLTSLPNELGNLISLIFVNLSECLNLTSLP 107

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           + +  L SL +LNLSGC  L ++P+ LG + SL  L++S        S + L+ N     
Sbjct: 108 NKLGNLTSLTSLNLSGCSNLTSLPNGLGNLTSLIFLNLSR------CSRLTLLPNALGNL 161

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            S      +     + LP N LG               + SLT LD+ +C    A++P++
Sbjct: 162 TSLTLLNLSECFRLISLP-NQLGN--------------LTSLTTLDVENCQ-SLASLPNE 205

Query: 237 IDNLHSLKELYLNR-------------------------NNFVTLPASISGLLNLEELEL 271
           + NL SL  L L+                          +N  +LP  +  L +L  + L
Sbjct: 206 LGNLTSLTFLNLSGCSRLTLLPNELGNLTSLTLLNLSGCSNLTSLPNELGNLTSLTSINL 265

Query: 272 EDCKRLQSLPQ 282
            +C  L SLP 
Sbjct: 266 SECLNLISLPN 276



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 2/117 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L  L L+G +S+T +P  +  LT L  L ++ C +L SLP  + +L  L T  L
Sbjct: 494 LGNITTLISLNLEGCSSLTSLPKELGNLTSLTKLDIRKCSSLISLPKELGNLTSLSTCNL 553

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRL 115
            GCS L   P+ + ++  L+ L L+G +S+  +P+ +     L +L +N+C NL  L
Sbjct: 554 EGCSSLISLPKELGNLTSLNTLNLEGCSSLTSLPNELFNFTSLTILRINDCSNLTSL 610



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 16/180 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CSRL    +E  ++  +    LS+ + +  L   +  L  L++
Sbjct: 419 PNELGNLISLTFLNLSGCSRLTLLPNELGNLTSLISLNLSECSSLTSLPKELGKLSSLIE 478

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGL 744
           L + GC++L  LP+ +  +  L +LNL G S     P+   +   L ++ + + +++  L
Sbjct: 479 LDIGGCESLTSLPKELGNITTLISLNLEGCSSLTSLPKELGNLTSLTKLDIRKCSSLISL 538

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P  +  L+     NL+ C +L SLP  +  L SL  +   GCS L ++   L    SL +
Sbjct: 539 PKELGNLTSLSTCNLEGCSSLISLPKELGNLTSLNTLNLEGCSSLTSLPNELFNFTSLTI 598



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L+ L L+ C  L  LP  +  L  L++LNLSG S     P    +   L  ++L   
Sbjct: 329 LTSLILLNLSECSRLTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNFTSLAMLNLRRC 388

Query: 740 -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L+  I  NL +C  L SLP+ +  L SL  +  SGCS+L  +   LG 
Sbjct: 389 WKLISLPNELGNLTSLISLNLSECSRLTSLPNELGNLISLTFLNLSGCSRLTLLPNELGN 448

Query: 799 VESL 802
           + SL
Sbjct: 449 LTSL 452



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTD--IRELSLAIEL--LFGLVQ 685
           P E GN           C +L    +E  ++  ++S       R  SL  EL  L  L  
Sbjct: 371 PNELGNFTSLAMLNLRRCWKLISLPNELGNLTSLISLNLSECSRLTSLPNELGNLISLTF 430

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L L+GC  L  LP  +  L  L +LNLS  S     P+       L+E+ + G  ++  L
Sbjct: 431 LNLSGCSRLTLLPNELGNLTSLISLNLSECSSLTSLPKELGKLSSLIELDIGGCESLTSL 490

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P  +  ++  I  NL+ C +L SLP  +  L SL  +    CS L ++ + LG + SL  
Sbjct: 491 PKELGNITTLISLNLEGCSSLTSLPKELGNLTSLTKLDIRKCSSLISLPKELGNLTSLST 550



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 18/167 (10%)

Query: 641 PQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P E GN + L         I+  LS+ + +  L   +  L  L  L L+GC NL  LP  
Sbjct: 323 PNELGNLTSL---------ILLNLSECSRLTSLPNELGNLTSLTSLNLSGCSNLTSLPNE 373

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS-- 757
           +     L+ LNL    K    P    +   L+ ++L E + +  LP  +    GN++S  
Sbjct: 374 LGNFTSLAMLNLRRCWKLISLPNELGNLTSLISLNLSECSRLTSLPNEL----GNLISLT 429

Query: 758 --NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             NL  C  L  LP+ +  L SL  +  S CS L ++ + LGK+ SL
Sbjct: 430 FLNLSGCSRLTLLPNELGNLTSLISLNLSECSSLTSLPKELGKLSSL 476



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 16/173 (9%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CS L    +E  +++ +    LS+  ++  L   +  L  L  
Sbjct: 59  PNELGNRTSLTSLNLSRCSNLTSLPNELGNLISLIFVNLSECLNLTSLPNKLGNLTSLTS 118

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEIHLEGTAIRGL 744
           L L+GC NL  LP  +  L  L  LNLS  S+    P  + +     L    E   +  L
Sbjct: 119 LNLSGCSNLTSLPNGLGNLTSLIFLNLSRCSRLTLLPNALGNLTSLTLLNLSECFRLISL 178

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           P  +  L+     ++++C++L SLP+ +  L SL  +  SGCS+L  +   LG
Sbjct: 179 PNQLGNLTSLTTLDVENCQSLASLPNELGNLTSLTFLNLSGCSRLTLLPNELG 231



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 716 SKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTING 774
           SK    P    +R  L  ++L   + +  LP  +  L   I  NL +C NL SLP+ +  
Sbjct: 53  SKLTSLPNELGNRTSLTSLNLSRCSNLTSLPNELGNLISLIFVNLSECLNLTSLPNKLGN 112

Query: 775 LRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L SL  +  SGCS L ++   LG + SL
Sbjct: 113 LTSLTSLNLSGCSNLTSLPNGLGNLTSL 140


>gi|2853078|emb|CAA16928.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268747|emb|CAB78953.1| TMV resistance protein N-like [Arabidopsis thaliana]
          Length = 1164

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 101/173 (58%), Gaps = 5/173 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++  K+L  L L+G +  ++  S++ +  L  L L+ C +L SLP     +K L+TL LS
Sbjct: 657 LSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILS 715

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GC KLK F  I  S+E    L+L+GT+I  V   IE L  L LL L  C+ L  LP+ + 
Sbjct: 716 GCLKLKDFHIISESIE---SLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLY 772

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            LKSL+ L LSGC  LE++P    K+E LE L + GT+I++ T  +  + NL+
Sbjct: 773 KLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQ-TPEMSCLSNLK 824



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 4/139 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L L  C +LE LP+    +K L TL LSG  K ++F  I+ S + L   HLEGTAI 
Sbjct: 686 LIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDFHIISESIESL---HLEGTAIE 741

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +   IE L   IL NLK+C+ LK LP+ +  L+SL+ +  SGCS L+++     K+E L
Sbjct: 742 RVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECL 801

Query: 803 EVRLSSWNRPKMQNDFDCV 821
           E+ L      K   +  C+
Sbjct: 802 EILLMDGTSIKQTPEMSCL 820



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 70/137 (51%), Gaps = 10/137 (7%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           +  L+L+GT+I  V   IE L  L LL LK C+ L  LP  +  LK L+ L LSGCS L+
Sbjct: 730 IESLHLEGTAIERVVEHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALE 789

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P I   ME L  L +DGTSI + P  +  L  L++     C+ ++   + +       
Sbjct: 790 SLPPIKEKMECLEILLMDGTSIKQTP-EMSCLSNLKICSF--CRPVIDDSTGL------- 839

Query: 127 TLNLSGCCKLENVPDTL 143
            L+  GC  LENV   L
Sbjct: 840 YLDAHGCGSLENVSKPL 856



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 61/331 (18%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           L LSG S+ K          +L +L L+G +  ++  S++ +  L  L L +C +L  LP
Sbjct: 652 LNLSGLSRAK----------NLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLP 701

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
                +KSLKTL LSGC KL++        ES+E L + GTAI R    I   ++L SL 
Sbjct: 702 KGFK-IKSLKTLILSGCLKLKDFHII---SESIESLHLEGTAIERVVEHI---ESLHSLI 754

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
                               LL   +C     LP+ L  + SL +L LS C   E+ +P 
Sbjct: 755 --------------------LLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALES-LPP 793

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRANG 294
             + +  L+ L ++  +    P  +S L NL+      C+     P I  +   ++ A+G
Sbjct: 794 IKEKMECLEILLMDGTSIKQTP-EMSCLSNLKICSF--CR-----PVIDDSTGLYLDAHG 845

Query: 295 CSSLVTLFGALKL------CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH 348
           C SL  +   L +        + +   +C    +  +++ +A + L+  L  +      H
Sbjct: 846 CGSLENVSKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRHHNH 905

Query: 349 K-------LSIVFPGSQIPKWFMYQNEGSSI 372
           K       +++ FPG  IP WF +Q  GS I
Sbjct: 906 KGLLLDPLVAVCFPGHDIPSWFSHQKMGSLI 936



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLP 769
           LNLSGLS+ +           L  + LEG     L  S++ ++  I  NL+DC +L+SLP
Sbjct: 652 LNLSGLSRAK----------NLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCTSLESLP 701

Query: 770 STINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
                ++SL+ +  SGC KLK+       +ESL +  ++  R
Sbjct: 702 KGFK-IKSLKTLILSGCLKLKDFHIISESIESLHLEGTAIER 742


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 5/279 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L+L    +T +P  I  L  L+ L   G   L +LP  I  LK L+ L+LS
Sbjct: 285 IGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLS 344

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++LK  P+ +  ++ L  L LD   +  +P  I  L  L++L L+  + L  LP  I 
Sbjct: 345 G-NQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQ-LKTLPKDIG 402

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L L    +L+ +P  +G+++ L+EL++S   +      I  ++NL+ L  +  
Sbjct: 403 QLQKLRVLELYNN-QLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNN 461

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           +L  S   +  +   +  + +L +L L++  L    +P DI+ L
Sbjct: 462 QLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQL--TTLPKDIEKL 519

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
            +L+ELYL  N   TLP  I  L  LE L L+D   L+S
Sbjct: 520 QNLQELYLTNNQLTTLPKEIRYLKGLEVLHLDDIPALRS 558



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 29/305 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L+   +  +P  I  L  L+ L L+  + L++LP  I  L+ L+ L+LS
Sbjct: 193 IGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQ-LTTLPNEIGKLQNLQKLDLS 251

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK---------- 110
           G ++LK  P+ +  +++L +LYL G  +  +P  I  L  L++L+L++ K          
Sbjct: 252 G-NQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQ 310

Query: 111 -------------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
                         L  LP  I  LK L+ L+LSG  +L+ +P  +G+++ L++L++   
Sbjct: 311 LQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSG-NQLKTLPKDIGQLQKLQDLELDSN 369

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
            ++     I  ++NL+ L  S                  +L   +  +  +   +  +  
Sbjct: 370 QLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQK 429

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L +L+LS   L    +P DI+ L +L+ L L  N   TLP  I  L NL+ L L   K L
Sbjct: 430 LQELNLSHNKL--TTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNK-L 486

Query: 278 QSLPQ 282
            +LP+
Sbjct: 487 TTLPK 491



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 135/308 (43%), Gaps = 63/308 (20%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS--GCS 63
           D+  L L+   +T +P  I  L  L+ L L   + L+++P  I  LK L+ L LS    +
Sbjct: 38  DVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQ-LTTIPKEIGYLKELQELNLSRNQLT 96

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L   P  +  ++   KLYLD   +  +P  I  L  L+ LYL   + L  LP  I  LK
Sbjct: 97  TLT-LPNKIGQLQ---KLYLDNNQLKTLPKEIGKLQNLQELYLTNNQ-LKTLPKEIGYLK 151

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            L+ L+L    +L  +P+ +GK+++L++LD+SG  ++     I  ++NLR          
Sbjct: 152 ELQDLDLRDN-QLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRE--------- 201

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                                                LDL+D  L    +P +I  L  L
Sbjct: 202 -------------------------------------LDLNDNQL--KTLPKEIGYLKEL 222

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSL 298
           ++L L  N   TLP  I  L NL++L+L    +L++LP+    LQ     ++  N   +L
Sbjct: 223 QDLDLRDNQLTTLPNEIGKLQNLQKLDL-SGNQLKTLPKEIGKLQNLQELYLYGNQLKTL 281

Query: 299 VTLFGALK 306
               G LK
Sbjct: 282 PKEIGYLK 289



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 39/274 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--NECKNL 112
           R L+L+  ++L   P+ +  +++L KL L    +  +P  I  L  L+ L L  N+   L
Sbjct: 40  RYLDLNN-NQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQLTTL 98

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP+ I  L+ L   N     +L+ +P  +GK+++L+EL ++   ++     I  +K L
Sbjct: 99  T-LPNKIGQLQKLYLDN----NQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKEL 153

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           + L            +    LP N +GK              + +L KLDLS   L    
Sbjct: 154 QDLDLRD--------NQLTTLP-NEIGK--------------LQNLQKLDLSGNQL--KT 188

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR- 291
           +P +I  L +L+EL LN N   TLP  I  L  L++L+L D  +L +LP     LQ ++ 
Sbjct: 189 LPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDN-QLTTLPNEIGKLQNLQK 247

Query: 292 ----ANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
                N   +L    G L+  +  Y   N + +L
Sbjct: 248 LDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTL 281



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 4/142 (2%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G   L+ LP+ I  LK L  L+LSG ++ +  P+      +L ++ L+   ++ LP  I 
Sbjct: 321 GDNQLKTLPKDIGYLKELQLLDLSG-NQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIG 379

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
            L    + NL + + LK+LP  I  L+ LR++     ++LK + + +G+++ L E+ LS 
Sbjct: 380 KLQNLQVLNLSNNQ-LKTLPKDIGQLQKLRVLELYN-NQLKTLPKEIGQLQKLQELNLSH 437

Query: 809 WNRPKMQNDFDCVEQSAVETVT 830
                +  D + ++   V  +T
Sbjct: 438 NKLTTLPKDIEKLQNLQVLNLT 459


>gi|224284251|gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 122/233 (52%), Gaps = 12/233 (5%)

Query: 25   ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLD 84
            +L+ GL+ LTL  CK++  LP +IS L+ LR L +  CS L K P+ + S+  L +L   
Sbjct: 773  DLVNGLQELTLSYCKSIKELPPSISKLQLLRVLRMDYCSSLMKVPEGLGSLNSLQELNFQ 832

Query: 85   G-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
            G T++ ++P+S+  L  L +L L+ C+ L  LP  I  L SL  L+   C  L ++P+++
Sbjct: 833  GCTNLRKLPNSLGKLFSLRILDLSSCEKLKELPHGIENLTSLVNLSFHKCASLRSIPESI 892

Query: 144  GKVESLE-ELDVSGTAIRRPTSSIFL-MKNLRSLYFSGCNE----PPASASWHLHLPFNL 197
            G+++S    +D+S  +  R   ++F+ + NLR L  S C      P         +  NL
Sbjct: 893  GRLKSSAFSMDMSCCSSLRELPNLFVELGNLRELNLSDCTSLEKLPKGFTQLKYLVKLNL 952

Query: 198  LGKSSC-PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
               S C  +  +      + SL  LDLS C + E  +P D   L +L+ LYL+
Sbjct: 953  ---SKCGALKELCNEFHCLLSLEILDLSGCKMLE-ELPPDFHCLTALENLYLS 1001



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 130/264 (49%), Gaps = 23/264 (8%)

Query: 54   LRTLELSGCSKLKKFPQ----IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC 109
            LR L+L+  +KLKK  +    +V  +++L+  Y    SI E+P SI  L  L +L ++ C
Sbjct: 753  LRILKLTRFAKLKKLSENLGDLVNGLQELTLSYC--KSIKELPPSISKLQLLRVLRMDYC 810

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFL 168
             +L+++P  +  L SL+ LN  GC  L  +P++LGK+ SL  LD+S    ++     I  
Sbjct: 811  SSLMKVPEGLGSLNSLQELNFQGCTNLRKLPNSLGKLFSLRILDLSSCEKLKELPHGIEN 870

Query: 169  MKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSL-TGVCSLTKLDLS 224
            + +L +L F  C      P S        F+ +  S C     LP+L   + +L +L+LS
Sbjct: 871  LTSLVNLSFHKCASLRSIPESIGRLKSSAFS-MDMSCCSSLRELPNLFVELGNLRELNLS 929

Query: 225  DCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
            DC   E  +P     L  L +L L++      L      LL+LE L+L  CK L+ L   
Sbjct: 930  DCTSLE-KLPKGFTQLKYLVKLNLSKCGALKELCNEFHCLLSLEILDLSGCKMLEEL--- 985

Query: 284  PPNLQFVRA------NGCSSLVTL 301
            PP+   + A      +GC SL  L
Sbjct: 986  PPDFHCLTALENLYLSGCESLQKL 1009



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 27/193 (13%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ +VP  +  L  L+ L  +GC NL  LP ++  L  LR L+LS C KLK+ P  + +
Sbjct: 811  SSLMKVPEGLGSLNSLQELNFQGCTNLRKLPNSLGKLFSLRILDLSSCEKLKELPHGIEN 870

Query: 75   MEDLSKLYLDG--------------------------TSIAEVPSSIELLPGLELLYLNE 108
            +  L  L                              +S+ E+P+    L  L  L L++
Sbjct: 871  LTSLVNLSFHKCASLRSIPESIGRLKSSAFSMDMSCCSSLRELPNLFVELGNLRELNLSD 930

Query: 109  CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF- 167
            C +L +LP     LK L  LNLS C  L+ + +    + SLE LD+SG  +       F 
Sbjct: 931  CTSLEKLPKGFTQLKYLVKLNLSKCGALKELCNEFHCLLSLEILDLSGCKMLEELPPDFH 990

Query: 168  LMKNLRSLYFSGC 180
             +  L +LY SGC
Sbjct: 991  CLTALENLYLSGC 1003



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 3/126 (2%)

Query: 678 ELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE 737
           +L+ GL +LTL+ CK+++ LP +IS L+ L  L +   S   + PE   S + L E++ +
Sbjct: 773 DLVNGLQELTLSYCKSIKELPPSISKLQLLRVLRMDYCSSLMKVPEGLGSLNSLQELNFQ 832

Query: 738 G-TAIRGLPASI-ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           G T +R LP S+ +L S  IL +L  C+ LK LP  I  L SL  +    C+ L+++ E+
Sbjct: 833 GCTNLRKLPNSLGKLFSLRIL-DLSSCEKLKELPHGIENLTSLVNLSFHKCASLRSIPES 891

Query: 796 LGKVES 801
           +G+++S
Sbjct: 892 IGRLKS 897



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 26/151 (17%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKC----------------------- 53
            + E+P  IE LT L  L+   C +L S+P +I  LK                        
Sbjct: 861  LKELPHGIENLTSLVNLSFHKCASLRSIPESIGRLKSSAFSMDMSCCSSLRELPNLFVEL 920

Query: 54   --LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECK 110
              LR L LS C+ L+K P+    ++ L KL L    ++ E+ +    L  LE+L L+ CK
Sbjct: 921  GNLRELNLSDCTSLEKLPKGFTQLKYLVKLNLSKCGALKELCNEFHCLLSLEILDLSGCK 980

Query: 111  NLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
             L  LP   + L +L+ L LSGC  L+ + +
Sbjct: 981  MLEELPPDFHCLTALENLYLSGCESLQKLTE 1011



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 23/127 (18%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            + +REL      L  L +L L+ C +LE+LP+  + LKYL  LNLS     +E       
Sbjct: 908  SSLRELPNLFVELGNLRELNLSDCTSLEKLPKGFTQLKYLVKLNLSKCGALKELCN---- 963

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                 E H              LLS  IL +L  CK L+ LP   + L +L  +Y SGC 
Sbjct: 964  -----EFHC-------------LLSLEIL-DLSGCKMLEELPPDFHCLTALENLYLSGCE 1004

Query: 788  KLKNVTE 794
             L+ +TE
Sbjct: 1005 SLQKLTE 1011



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITS 726
           T++R+L  ++  LF L  L L+ C+ L+ LP  I  L  L  L+    +  R  PE I  
Sbjct: 835 TNLRKLPNSLGKLFSLRILDLSSCEKLKELPHGIENLTSLVNLSFHKCASLRSIPESIGR 894

Query: 727 SRDQLLEIHLE-GTAIRGLP-ASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMYP 783
            +     + +   +++R LP   +EL  GN+   NL DC +L+ LP     L+ L  +  
Sbjct: 895 LKSSAFSMDMSCCSSLRELPNLFVEL--GNLRELNLSDCTSLEKLPKGFTQLKYLVKLNL 952

Query: 784 SGCSKLKNVTETLGKVESLEV 804
           S C  LK +      + SLE+
Sbjct: 953 SKCGALKELCNEFHCLLSLEI 973


>gi|168042943|ref|XP_001773946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674790|gb|EDQ61294.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 157/299 (52%), Gaps = 13/299 (4%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D + +T +P+ +  L+ L  L +  C++L+SLP  + +L  L +L LSGC +L   P  +
Sbjct: 5   DCSRLTSLPNELGNLSSLTTLNMSKCRSLASLPNELGNLTSLTSLNLSGCWELTSLPNEL 64

Query: 73  ASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            ++  L+ L L D + +  +P+ +  L  L  L +++C  L  LP+ +  L SL +LNLS
Sbjct: 65  GNLTSLTSLNLCDCSRLTSLPNELGNLTSLTSLDMSKCPYLTSLPNELGNLASLTSLNLS 124

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTS---SIFLMKNLRSLYFSGCNEPPASAS 188
           GC KL ++P+ LG + SL  L++   +  R TS    +  +  L SL  SGC +  +  +
Sbjct: 125 GCWKLTSLPNELGNLTSLAFLNLCDCS--RLTSLPNELGNLTTLTSLNISGCLKLTSLPN 182

Query: 189 WHLHLP-FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
              +L     L  S C   + LP+ L  + SLT L+LS C     ++P+D++NL SL  L
Sbjct: 183 ELGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNLSGCW-ELTSLPNDLNNLTSLVSL 241

Query: 247 YLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
            L    + + LP  +  L  L  L + +C +L SLP    NL  + +   +GC  L +L
Sbjct: 242 NLFECPSLIILPNELGNLTTLTSLNISECLKLTSLPNELGNLTSLTSLNLSGCWDLTSL 300



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 150/296 (50%), Gaps = 27/296 (9%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L L D + +T +P+ +  LT L  L +  C  L+SLP  + +L  L +L L
Sbjct: 64  LGNLTSLTSLNLCDCSRLTSLPNELGNLTSLTSLDMSKCPYLTSLPNELGNLASLTSLNL 123

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC KL   P  + ++  L+ L L D + +  +P+ +  L  L  L ++ C  L  LP+ 
Sbjct: 124 SGCWKLTSLPNELGNLTSLAFLNLCDCSRLTSLPNELGNLTTLTSLNISGCLKLTSLPNE 183

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  L SL +LNLS C KL ++P+ LG + SL  L++SG      TS    + NL SL   
Sbjct: 184 LGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNLSG--CWELTSLPNDLNNLTSLV-- 239

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                            NL     CP  ++LP+ L  + +LT L++S+C L   ++P+++
Sbjct: 240 ---------------SLNLF---ECPSLIILPNELGNLTTLTSLNISEC-LKLTSLPNEL 280

Query: 238 DNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            NL SL  L L+   +  +LP  +  +  L  L +  C++L SLP    NL  + +
Sbjct: 281 GNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPNELGNLTTLTS 336



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 132/275 (48%), Gaps = 29/275 (10%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEV 91
           L L+ C  L+SLP  + +L  L TL +S C  L   P  + ++  L+ L L G   +  +
Sbjct: 1   LNLRDCSRLTSLPNELGNLSSLTTLNMSKCRSLASLPNELGNLTSLTSLNLSGCWELTSL 60

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
           P+ +  L  L  L L +C  L  LP+ +  L SL +L++S C  L ++P+ LG + SL  
Sbjct: 61  PNELGNLTSLTSLNLCDCSRLTSLPNELGNLTSLTSLDMSKCPYLTSLPNELGNLASLTS 120

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS 211
           L++SG    + TS    + NL SL F                    L    C     LP+
Sbjct: 121 LNLSG--CWKLTSLPNELGNLTSLAF--------------------LNLCDCSRLTSLPN 158

Query: 212 -LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEEL 269
            L  + +LT L++S C L   ++P+++ NL SL  L L+R    ++LP  +  L++L  L
Sbjct: 159 ELGNLTTLTSLNISGC-LKLTSLPNELGNLTSLTSLNLSRCWKLISLPNELGNLISLTSL 217

Query: 270 ELEDCKRLQSLPQIPPNL-QFVRAN--GCSSLVTL 301
            L  C  L SLP    NL   V  N   C SL+ L
Sbjct: 218 NLSGCWELTSLPNDLNNLTSLVSLNLFECPSLIIL 252



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 32/282 (11%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +T +P+ +  LT L  L L GC +L+SLP  + ++  L +L +SGC KL   P  + ++ 
Sbjct: 273 LTSLPNELGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPNELGNLT 332

Query: 77  DLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            L+ L +     +  +P+ +  L  L  + L +C  L  LP+ ++ L +L + N+SGC K
Sbjct: 333 TLTSLNISRCQKLTSLPNELGNLTSLTSINLCDCSRLKSLPNELSNLTTLTSSNISGCLK 392

Query: 136 LENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
           L ++P+ LG + SL  L++SG    T++R    +   + +L SL  SGC +  +      
Sbjct: 393 LTSLPNELGNLISLISLNLSGCWELTSLRNELGN---LTSLTSLNISGCQKLTS------ 443

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
            LP N LG               + SLT ++L  C     ++P+++ NL SL  L ++  
Sbjct: 444 -LP-NELGN--------------LTSLTSINLRHCS-RLKSLPNELGNLTSLTSLNISGC 486

Query: 252 -NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
               +LP  +  L +L  L L  C  L SLP    NL  + +
Sbjct: 487 WELTSLPNELGNLTSLISLNLSRCWELTSLPNKLSNLTSLTS 528



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 156/344 (45%), Gaps = 55/344 (15%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D + +T +P+ +  LT L  L + GC  L+SLP  + +L  L +L LS C KL   P  +
Sbjct: 149 DCSRLTSLPNELGNLTTLTSLNISGCLKLTSLPNELGNLTSLTSLNLSRCWKLISLPNEL 208

Query: 73  ASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            ++  L+ L L G   +  +P+ +  L  L  L L EC +L+ LP+ +  L +L +LN+S
Sbjct: 209 GNLISLTSLNLSGCWELTSLPNDLNNLTSLVSLNLFECPSLIILPNELGNLTTLTSLNIS 268

Query: 132 GCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
            C KL ++P+ LG + SL  L++SG   +    + +  M  L SL  SGC +  +  +  
Sbjct: 269 ECLKLTSLPNELGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPNEL 328

Query: 191 LHLP-FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCG--------------------- 227
            +L     L  S C     LP+ L  + SLT ++L DC                      
Sbjct: 329 GNLTTLTSLNISRCQKLTSLPNELGNLTSLTSINLCDCSRLKSLPNELSNLTTLTSSNIS 388

Query: 228 --LGEAAIPSDIDNLHSLKELYLN--------RN-----------------NFVTLPASI 260
             L   ++P+++ NL SL  L L+        RN                    +LP  +
Sbjct: 389 GCLKLTSLPNELGNLISLISLNLSGCWELTSLRNELGNLTSLTSLNISGCQKLTSLPNEL 448

Query: 261 SGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
             L +L  + L  C RL+SLP    NL  + +   +GC  L +L
Sbjct: 449 GNLTSLTSINLRHCSRLKSLPNELGNLTSLTSLNISGCWELTSL 492



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 148/308 (48%), Gaps = 30/308 (9%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L + G   +T +P+ +  LT L  L L  C  L SLP  + +L  L +L L
Sbjct: 160 LGNLTTLTSLNISGCLKLTSLPNELGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNL 219

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC +L   P  + ++  L  L L +  S+  +P+ +  L  L  L ++EC  L  LP+ 
Sbjct: 220 SGCWELTSLPNDLNNLTSLVSLNLFECPSLIILPNELGNLTTLTSLNISECLKLTSLPNE 279

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  L SL +LNLSGC  L ++P+ LG + +L  L++SG   ++ TS    + NL +L   
Sbjct: 280 LGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISG--CQKLTSLPNELGNLTTLTS- 336

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                              L  S C     LP+ L  + SLT ++L DC     ++P+++
Sbjct: 337 -------------------LNISRCQKLTSLPNELGNLTSLTSINLCDCS-RLKSLPNEL 376

Query: 238 DNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---N 293
            NL +L    ++      +LP  +  L++L  L L  C  L SL     NL  + +   +
Sbjct: 377 SNLTTLTSSNISGCLKLTSLPNELGNLISLISLNLSGCWELTSLRNELGNLTSLTSLNIS 436

Query: 294 GCSSLVTL 301
           GC  L +L
Sbjct: 437 GCQKLTSL 444



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 2/157 (1%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ + L D + +  +P+ +  LT L    + GC  L+SLP  + +L  L +L L
Sbjct: 352 LGNLTSLTSINLCDCSRLKSLPNELSNLTTLTSSNISGCLKLTSLPNELGNLISLISLNL 411

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC +L      + ++  L+ L + G   +  +P+ +  L  L  + L  C  L  LP+ 
Sbjct: 412 SGCWELTSLRNELGNLTSLTSLNISGCQKLTSLPNELGNLTSLTSINLRHCSRLKSLPNE 471

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
           +  L SL +LN+SGC +L ++P+ LG + SL  L++S
Sbjct: 472 LGNLTSLTSLNISGCWELTSLPNELGNLTSLISLNLS 508



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 3/142 (2%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-G 738
           L  L  L L+GC +L  LP  +  +  L++LN+SG  K    P    +   L  +++   
Sbjct: 283 LTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPNELGNLTTLTSLNISRC 342

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L+     NL DC  LKSLP+ ++ L +L     SGC KL ++   LG 
Sbjct: 343 QKLTSLPNELGNLTSLTSINLCDCSRLKSLPNELSNLTTLTSSNISGCLKLTSLPNELGN 402

Query: 799 VESL-EVRLSS-WNRPKMQNDF 818
           + SL  + LS  W    ++N+ 
Sbjct: 403 LISLISLNLSGCWELTSLRNEL 424



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 16/178 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           C +L    +E  ++  +    LS   D+  L   +  +  L  
Sbjct: 253 PNELGNLTTLTSLNISECLKLTSLPNELGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTS 312

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGL 744
           L ++GC+ L  LP  +  L  L++LN+S   K    P    +   L  I+L + + ++ L
Sbjct: 313 LNISGCQKLTSLPNELGNLTTLTSLNISRCQKLTSLPNELGNLTSLTSINLCDCSRLKSL 372

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P  +  L+    SN+  C  L SLP+ +  L SL  +  SGC +L ++   LG + SL
Sbjct: 373 PNELSNLTTLTSSNISGCLKLTSLPNELGNLISLISLNLSGCWELTSLRNELGNLTSL 430



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 38/177 (21%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTD--IRELSLAIEL--LFGLVQ 685
           P E GN           CSRL    +E  ++  + S      ++  SL  EL  L  L+ 
Sbjct: 349 PNELGNLTSLTSINLCDCSRLKSLPNELSNLTTLTSSNISGCLKLTSLPNELGNLISLIS 408

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L+GC  L  L   +  L  L++LN+SG  K    P    +   L  I           
Sbjct: 409 LNLSGCWELTSLRNELGNLTSLTSLNISGCQKLTSLPNELGNLTSLTSI----------- 457

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                       NL+ C  LKSLP+ +  L SL  +  SGC +L ++   LG + SL
Sbjct: 458 ------------NLRHCSRLKSLPNELGNLTSLTSLNISGCWELTSLPNELGNLTSL 502



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L L  C  L  LP  +  L  L++L++S        P    +   L  ++L G 
Sbjct: 67  LTSLTSLNLCDCSRLTSLPNELGNLTSLTSLDMSKCPYLTSLPNELGNLASLTSLNLSGC 126

Query: 740 -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L+     NL DC  L SLP+ +  L +L  +  SGC KL ++   LG 
Sbjct: 127 WKLTSLPNELGNLTSLAFLNLCDCSRLTSLPNELGNLTTLTSLNISGCLKLTSLPNELGN 186

Query: 799 VESL 802
           + SL
Sbjct: 187 LTSL 190



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 25/240 (10%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           C +L    +E  ++  +    L D + +  L   +  L  L  
Sbjct: 109 PNELGNLASLTSLNLSGCWKLTSLPNELGNLTSLAFLNLCDCSRLTSLPNELGNLTTLTS 168

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L ++GC  L  LP  +  L  L++LNLS   K    P    +   L  ++L G   +  L
Sbjct: 169 LNISGCLKLTSLPNELGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNLSGCWELTSL 228

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-E 803
           P  +  L+  +  NL +C +L  LP+ +  L +L  +  S C KL ++   LG + SL  
Sbjct: 229 PNDLNNLTSLVSLNLFECPSLIILPNELGNLTTLTSLNISECLKLTSLPNELGNLTSLTS 288

Query: 804 VRLSS-WNRPKMQND------FDCVEQSAVETVTKLAKAELLRDSDSWKKNVDKCMKLST 856
           + LS  W+   + N+         +  S  + +T L   EL   +     N+ +C KL++
Sbjct: 289 LNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPN-ELGNLTTLTSLNISRCQKLTS 347



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 9/128 (7%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  L ++ C++L  LP  +  L  L++LNLSG  +    P    +   L  ++L + 
Sbjct: 19  LSSLTTLNMSKCRSLASLPNELGNLTSLTSLNLSGCWELTSLPNELGNLTSLTSLNLCDC 78

Query: 739 TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           + +  LP  +    GN+ S    ++  C  L SLP+ +  L SL  +  SGC KL ++  
Sbjct: 79  SRLTSLPNEL----GNLTSLTSLDMSKCPYLTSLPNELGNLASLTSLNLSGCWKLTSLPN 134

Query: 795 TLGKVESL 802
            LG + SL
Sbjct: 135 ELGNLTSL 142



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 51/234 (21%)

Query: 610 QQGQFVKMISVD-SGCMSCYKKWGRQTVRRQSPQEPGN-----------CSRLWEEADEF 657
           + G    + S++ SGC      W   ++    P E GN           CSRL    +E 
Sbjct: 111 ELGNLASLTSLNLSGC------WKLTSL----PNELGNLTSLAFLNLCDCSRLTSLPNEL 160

Query: 658 PDIVQVLSDGTD--IRELSLAIEL--LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLS 713
            ++  + S      ++  SL  EL  L  L  L L+ C  L  LP  +  L  L++LNLS
Sbjct: 161 GNLTTLTSLNISGCLKLTSLPNELGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNLS 220

Query: 714 GLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLS-------------------- 752
           G  +    P   ++   L+ ++L E  ++  LP  +  L+                    
Sbjct: 221 GCWELTSLPNDLNNLTSLVSLNLFECPSLIILPNELGNLTTLTSLNISECLKLTSLPNEL 280

Query: 753 GNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           GN+ S    NL  C +L SLP+ +  + +L  +  SGC KL ++   LG + +L
Sbjct: 281 GNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPNELGNLTTL 334


>gi|145326644|ref|NP_001077769.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324936|gb|AAG52415.1|AC011622_3 putative disease resistance protein; 17840-13447 [Arabidopsis
           thaliana]
 gi|332196021|gb|AEE34142.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1131

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 82/374 (21%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           LK L+ ++L+    LK+ P + ++  +L   YLD   S+ E+PSS   L  LE L +N C
Sbjct: 629 LKNLKYMDLTESKNLKELPDL-SNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNC 687

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            NL  +P+ +N L S+K +N+ GC +L   P     +E+L   D+S              
Sbjct: 688 INLQVIPAHMN-LTSVKQVNMKGCSRLRKFPVISRHIEAL---DISDNT----------- 732

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS--DCG 227
             L  +       P + ASW                          C L  LD+S  +  
Sbjct: 733 -ELEDM-------PASIASW--------------------------CHLVYLDMSHNEKL 758

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            G   +P+      SL+ L L+  +  ++P  I  L  LEEL L  C RL SLP +P ++
Sbjct: 759 QGLTQLPT------SLRHLNLSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSI 812

Query: 288 QFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
           + + A  C SL ++   L    ++ +  NC       +  G A    RE +  ++    G
Sbjct: 813 KALEAEDCESLESVSSPLYTPSARLSFTNC------FKLGGEA----REAIIRRSSDSTG 862

Query: 348 HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
              S++ PG ++P  F ++ +G+S+++  P     +     F +C V   P+H       
Sbjct: 863 ---SVLLPGREVPAEFDHRAQGNSLSILLP-----LGGNSQFMVCVVIS-PRHDITKMSN 913

Query: 408 HSYPAHELECSMDG 421
            S    EL C ++G
Sbjct: 914 ES----ELLCRING 923



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 23/153 (15%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+  +   L  L  L +N C NL+ +P  ++ L  +  +N+ G S+ R+FP + S   + 
Sbjct: 668 EIPSSFAHLHKLEWLEMNNCINLQVIPAHMN-LTSVKQVNMKGCSRLRKFP-VISRHIEA 725

Query: 732 LEIHLEGTAIRGLPASI--------------ELLSG--NILSNLKDCK----NLKSLPST 771
           L+I  + T +  +PASI              E L G   + ++L+       +++S+P  
Sbjct: 726 LDIS-DNTELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTSLRHLNLSYTDIESIPDC 784

Query: 772 INGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           I  L  L  +  SGC++L ++ +    +++LE 
Sbjct: 785 IKALHQLEELCLSGCTRLASLPDLPCSIKALEA 817


>gi|168032887|ref|XP_001768949.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679861|gb|EDQ66303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 538

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 152/300 (50%), Gaps = 23/300 (7%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +T +P+ +  LT L  L ++ C +L+SLP  + +L  L TL ++ CS L   P  + ++ 
Sbjct: 7   LTSLPNELGNLTSLTTLDIRRCSSLTSLPNELGNLISLTTLRMNECSSLTSLPNELGNLT 66

Query: 77  DLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            L+ L +   +S+  +P+ +  L  L    L+ C +L  LP+ +  L SL T ++ GC  
Sbjct: 67  SLTTLDIRRCSSLTSLPNELGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGCLS 126

Query: 136 LENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           L ++P+ LG + SL  L++ G +++    + +  + +L +L    C+   +       LP
Sbjct: 127 LTSLPNELGNLTSLTTLNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTS-------LP 179

Query: 195 FNL--------LGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
           + L        L    C    +LP+ L  + SLT +D+  C     ++P+++DNL SL  
Sbjct: 180 YELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWCS-SLTSLPNELDNLTSLTN 238

Query: 246 LYLN-RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           L +   ++ ++LP  +  L +L  L ++ C  L SLP    N   L  +R N CSSL +L
Sbjct: 239 LNIQWYSSLISLPNELDNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSL 298



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 148/305 (48%), Gaps = 16/305 (5%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L    L GC +L+SLP  + +L  L T ++ GC  L   P  + +
Sbjct: 77  SSLTSLPNELGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGN 136

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L +DG +S+  +P+ +  L  L  L +  C +L  LP  +  L SL TLN+  C
Sbjct: 137 LTSLTTLNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPYELGNLTSLTTLNMECC 196

Query: 134 CKLENVPDTLGKVESLEELDV----SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
             L  +P+ LG + SL  +D+    S T++     ++  + NL   ++S     P     
Sbjct: 197 SSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTNLNIQWYSSLISLPNELDN 256

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
              L    L    C     LP+ +G + SLT L +++C     ++P+++ NL SL    +
Sbjct: 257 LTSLTT--LNIQWCSSLTSLPNESGNLISLTTLRMNECS-SLTSLPNELGNLTSLTTFDI 313

Query: 249 NR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL--- 301
            R ++  +LP  +  L +L  L +E C  L SLP    NL  +       CSSL +L   
Sbjct: 314 GRCSSLTSLPNELGNLTSLTTLNIEWCSSLISLPSELGNLTILTTFNIGRCSSLTSLSNE 373

Query: 302 FGALK 306
            G LK
Sbjct: 374 LGNLK 378



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 14/297 (4%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+  +P+ ++ LT L  L ++ C +L+SLP    +L  L TL ++ CS L   P  + +
Sbjct: 245 SSLISLPNELDNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNELGN 304

Query: 75  MEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+   +   +S+  +P+ +  L  L  L +  C +L+ LPS +  L  L T N+  C
Sbjct: 305 LTSLTTFDIGRCSSLTSLPNELGNLTSLTTLNIEWCSSLISLPSELGNLTILTTFNIGRC 364

Query: 134 CKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASAS 188
             L ++ + LG ++SL   D+   +++    +    + +L +     C+     P  S +
Sbjct: 365 SSLTSLSNELGNLKSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNESDN 424

Query: 189 WHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                 F+L G   C     LP+ L  + SLT L++  C     ++P++  NL SL  L 
Sbjct: 425 LTSLTSFDLSGW--CSSLTSLPNELGNLTSLTTLNIQWCS-SLTSLPNESGNLISLTTLR 481

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVT 300
           +N  ++  +LP  +  L +L    +  C  L SLP    NL  +      GCSSL +
Sbjct: 482 MNECSSLTSLPNELGNLTSLTTFYIGRCSSLTSLPNELGNLTSLTTFDLRGCSSLTS 538



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 29/246 (11%)

Query: 62  CSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           CS+L   P  + ++  L+ L +   +S+  +P+ +  L  L  L +NEC +L  LP+ + 
Sbjct: 4   CSRLTSLPNELGNLTSLTTLDIRRCSSLTSLPNELGNLISLTTLRMNECSSLTSLPNELG 63

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL TL++  C  L ++P+ LG + SL   D+SG +    TS    + NL SL     
Sbjct: 64  NLTSLTTLDIRRCSSLTSLPNELGNLTSLTTFDLSGCS--SLTSLPNELGNLTSLT---- 117

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                         F++ G   C     LP+ L  + SLT L++ D      ++P+++ N
Sbjct: 118 -------------TFDIQG---CLSLTSLPNELGNLTSLTTLNI-DGWSSLTSLPNELGN 160

Query: 240 LHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGC 295
           L SL  L +   ++  +LP  +  L +L  L +E C  L  LP    N   L  +    C
Sbjct: 161 LTSLTTLNMEYCSSLTSLPYELGNLTSLTTLNMECCSSLTLLPNELGNLTSLTIIDIGWC 220

Query: 296 SSLVTL 301
           SSL +L
Sbjct: 221 SSLTSL 226



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 27/209 (12%)

Query: 636 VRRQS-----PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL 679
           +RR S     P E GN           CS L    +E  ++  + +   DIR  S    L
Sbjct: 25  IRRCSSLTSLPNELGNLISLTTLRMNECSSLTSLPNELGNLTSLTT--LDIRRCSSLTSL 82

Query: 680 ------LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE 733
                 L  L    L+GC +L  LP  +  L  L+T ++ G       P    +   L  
Sbjct: 83  PNELGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTT 142

Query: 734 IHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           ++++G +++  LP  +  L+     N++ C +L SLP  +  L SL  +    CS L  +
Sbjct: 143 LNIDGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPYELGNLTSLTTLNMECCSSLTLL 202

Query: 793 TETLGKVESLEVRLSSW--NRPKMQNDFD 819
              LG + SL +    W  +   + N+ D
Sbjct: 203 PNELGNLTSLTIIDIGWCSSLTSLPNELD 231



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPA 746
           +N C  L  LP  +  L  L+TL++   S     P    +   L  + + E +++  LP 
Sbjct: 1   MNECSRLTSLPNELGNLTSLTTLDIRRCSSLTSLPNELGNLISLTTLRMNECSSLTSLPN 60

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            +  L+     +++ C +L SLP+ +  L SL     SGCS L ++   LG + SL  
Sbjct: 61  ELGNLTSLTTLDIRRCSSLTSLPNELGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTT 118


>gi|168064075|ref|XP_001783991.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664498|gb|EDQ51216.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 527

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 156/351 (44%), Gaps = 65/351 (18%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ LYL G S +T +P+ +  LT L  L L GC NL+SLP  + +   L +L L
Sbjct: 86  LGNLTSLTSLYLSGCSNLTSLPNELGNLTSLTSLYLSGCLNLTSLPNELGNFTSLTSLWL 145

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-------------------------IAEVPSS 94
           + C KL   P  + ++  L+ LYL G S                         +  +P+ 
Sbjct: 146 NECFKLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLISLTSLNICDCSRLTSLPNE 205

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
              L  L  L +++C++L  LP+ +  L SL +LNL  C KL + P+ LG + SL  LDV
Sbjct: 206 FGNLLSLTTLDMSKCQSLAALPNELGNLTSLTSLNLCDCSKLTSFPNALGNLSSLTTLDV 265

Query: 155 S----------------------GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
           S                       +   + TS +  + NL SL          S  W L 
Sbjct: 266 SECQSLESLPNELENLSSLTSLNLSGCWKLTSFLNELGNLTSLT-----SLNLSGYWKLT 320

Query: 193 LPFNLLGK---------SSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
              N LG          S C    +LP+  G + SLT L+LS C     ++P+++ NL S
Sbjct: 321 SLPNELGNLTSLTSLDLSGCSNLTLLPNELGKLISLTSLNLSGCW-KLTSLPNELGNLTS 379

Query: 243 LKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           L  L L+   N  +LP  +  L +L  L L +C +L SLP    NL  + +
Sbjct: 380 LTSLNLSGCLNLTSLPNELGNLTSLTSLNLSECWKLTSLPNELGNLTSLTS 430



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 27/286 (9%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L L D + +T  P+++  L+ L  L +  C++L SLP  + +L  L +L L
Sbjct: 230 LGNLTSLTSLNLCDCSKLTSFPNALGNLSSLTTLDVSECQSLESLPNELENLSSLTSLNL 289

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGC KL  F   + ++  L+ L L G   +  +P+ +  L  L  L L+ C NL  LP+ 
Sbjct: 290 SGCWKLTSFLNELGNLTSLTSLNLSGYWKLTSLPNELGNLTSLTSLDLSGCSNLTLLPNE 349

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYF 177
           +  L SL +LNLSGC KL ++P+ LG + SL  L++SG   +    + +  + +L SL  
Sbjct: 350 LGKLISLTSLNLSGCWKLTSLPNELGNLTSLTSLNLSGCLNLTSLPNELGNLTSLTSLNL 409

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           S C        W L    N LG               + SLT L+L  C     ++P+++
Sbjct: 410 SEC--------WKLTSLPNELGN--------------LTSLTSLNLKRCS-WLTSLPNEL 446

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           DNL SL  L L+  +N  +LP  +  L +L  L+L +C +L SLP 
Sbjct: 447 DNLTSLTSLDLSGCSNLTSLPNELGNLTSLTSLDLSECWKLTSLPN 492



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 121/234 (51%), Gaps = 6/234 (2%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L T E+  CSKL   P  +  +  L+ L L G  ++  +P+ +  L  L  LYL+ C NL
Sbjct: 44  LTTCEIIKCSKLISLPNELGKLISLTSLNLSGFLNLTSLPNELGNLTSLTSLYLSGCSNL 103

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKN 171
             LP+ +  L SL +L LSGC  L ++P+ LG   SL  L ++    +    + +  + +
Sbjct: 104 TSLPNELGNLTSLTSLYLSGCLNLTSLPNELGNFTSLTSLWLNECFKLTSLPNELGNLTS 163

Query: 172 LRSLYFSGCNEPPASASWHLHL-PFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLG 229
           L SLY SGC+   +  +   +L     L    C     LP+  G + SLT LD+S C   
Sbjct: 164 LTSLYLSGCSNLTSLPNELGNLISLTSLNICDCSRLTSLPNEFGNLLSLTTLDMSKCQ-S 222

Query: 230 EAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            AA+P+++ NL SL  L L + +   + P ++  L +L  L++ +C+ L+SLP 
Sbjct: 223 LAALPNELGNLTSLTSLNLCDCSKLTSFPNALGNLSSLTTLDVSECQSLESLPN 276



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +  L+ L L G   +T +P+ +  LT L  L L GC NL+SLP  + +L  L +L L
Sbjct: 350 LGKLISLTSLNLSGCWKLTSLPNELGNLTSLTSLNLSGCLNLTSLPNELGNLTSLTSLNL 409

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C KL   P  + ++  L+ L L   S +  +P+ ++ L  L  L L+ C NL  LP+ 
Sbjct: 410 SECWKLTSLPNELGNLTSLTSLNLKRCSWLTSLPNELDNLTSLTSLDLSGCSNLTSLPNE 469

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
           +  L SL +L+LS C KL ++P+ LG +  L    + G
Sbjct: 470 LGNLTSLTSLDLSECWKLTSLPNELGNLIPLTRFRLLG 507



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  L L+GC  L  LP  +  L  L++LNLSG       P    +   L  ++L E 
Sbjct: 353 LISLTSLNLSGCWKLTSLPNELGNLTSLTSLNLSGCLNLTSLPNELGNLTSLTSLNLSEC 412

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
             +  LP  +  L+     NLK C  L SLP+ ++ L SL  +  SGCS L ++   LG 
Sbjct: 413 WKLTSLPNELGNLTSLTSLNLKRCSWLTSLPNELDNLTSLTSLDLSGCSNLTSLPNELGN 472

Query: 799 VESL 802
           + SL
Sbjct: 473 LTSL 476



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 9/128 (7%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L L+G  NL  LP  +  L  L++L LSG S     P    +   L  ++L G 
Sbjct: 65  LISLTSLNLSGFLNLTSLPNELGNLTSLTSLYLSGCSNLTSLPNELGNLTSLTSLYLSGC 124

Query: 740 A-IRGLPASIELLSGNILSN----LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
             +  LP  +    GN  S     L +C  L SLP+ +  L SL  +Y SGCS L ++  
Sbjct: 125 LNLTSLPNEL----GNFTSLTSLWLNECFKLTSLPNELGNLTSLTSLYLSGCSNLTSLPN 180

Query: 795 TLGKVESL 802
            LG + SL
Sbjct: 181 ELGNLISL 188



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 1/121 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L L+GC NL  LP  +  L  L++LNLS   K    P    +   L  ++L+  
Sbjct: 377 LTSLTSLNLSGCLNLTSLPNELGNLTSLTSLNLSECWKLTSLPNELGNLTSLTSLNLKRC 436

Query: 740 A-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + +  LP  ++ L+     +L  C NL SLP+ +  L SL  +  S C KL ++   LG 
Sbjct: 437 SWLTSLPNELDNLTSLTSLDLSGCSNLTSLPNELGNLTSLTSLDLSECWKLTSLPNELGN 496

Query: 799 V 799
           +
Sbjct: 497 L 497



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 23/112 (20%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL 750
           C  L  LP  +  L  L++LNLSG       P    +   L  ++L G            
Sbjct: 52  CSKLISLPNELGKLISLTSLNLSGFLNLTSLPNELGNLTSLTSLYLSG------------ 99

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                      C NL SLP+ +  L SL  +Y SGC  L ++   LG   SL
Sbjct: 100 -----------CSNLTSLPNELGNLTSLTSLYLSGCLNLTSLPNELGNFTSL 140


>gi|357513721|ref|XP_003627149.1| Disease resistance protein [Medicago truncatula]
 gi|355521171|gb|AET01625.1| Disease resistance protein [Medicago truncatula]
          Length = 1630

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 229/521 (43%), Gaps = 94/521 (18%)

Query: 12   LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
            L  ++I  +   ++ +  LE++ L  CK   SLP    +LK L+ L LSGC +L +    
Sbjct: 689  LPHSNIEHLWHGMQEVVNLEVIDLSECKKFRSLPDLSGALK-LKQLRLSGCEELCELQPS 747

Query: 72   VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS-SINGLKSLKTLNL 130
              S + L  L LD                ++L  L   K+L  L   S+ G KSLK  +L
Sbjct: 748  AFSKDTLDTLLLDRC--------------IKLESLMGEKHLTSLKYFSVKGCKSLKEFSL 793

Query: 131  SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASAS 188
            S               +S+  LD+S T I+    S+  M NL  L     N    P   S
Sbjct: 794  SS--------------DSINRLDLSKTGIKILHPSLGDMNNLIWLNLEDLNLTNLPIELS 839

Query: 189  WHLHLPFNLLGKSSCPVAL---MLPSLTGVCSLTKLDLSD-CGLGEAAIPSDIDNLHSLK 244
             HL      L  S C V     +     G+  L  L L D C L E  +P++I +L SL 
Sbjct: 840  -HLR-SLTELRVSKCNVVTKSKLEALFDGLTLLRLLHLKDCCNLIE--LPANISSLESLH 895

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT---- 300
            EL L+ ++   LPASI  L  LE   L++C +L+ LP++P +++  +A+ C+SL+T    
Sbjct: 896  ELRLDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSLITVSTL 955

Query: 301  ------LFGALKLCRSKYTI--------INCI--DSLKLLRKNGLAISMLREYLELQAVS 344
                  + G  K    K +I        ++CI  D++  ++       ++R+Y   Q  S
Sbjct: 956  KTFSINMIGQKKYISFKNSIMLELDGPSLDCITEDAVLTMKSAAFHNVLVRKY-RFQTHS 1014

Query: 345  DPGHKLSIVFPGSQIPKWFMYQN-EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTG 403
               ++  +  PG ++P+ F +++   SSITV       N++K +G    C+F V    + 
Sbjct: 1015 FNYNRAEVCLPGRRVPREFKHRSTTSSSITV-------NISKSLG----CIFAVVVSPSK 1063

Query: 404  TYLFHSY-PAHELEC-SMDGSGEGHYIYFRGKFGH-----VVSDHLWLLFLPRHGHNWQF 456
                H Y      +C + DGS E   + ++ K+ H     +  DH+++ + P H ++   
Sbjct: 1064 RTQQHGYFVGMRCQCYTEDGSRE---VGYKSKWDHKPITNLNMDHIFVWYDPYH-YDSIL 1119

Query: 457  ESNLIRLSFR----------SISDPTWKVKRCGFHPIYMHE 487
             S   ++SF+             D    +K CG  PIY  E
Sbjct: 1120 SSIGRKISFKFCIKTYTSSGRELDGLLSIKECGVCPIYYSE 1160


>gi|168042657|ref|XP_001773804.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674919|gb|EDQ61421.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 147/295 (49%), Gaps = 16/295 (5%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           VP+ ++ +T L++L LK CK L SLP +I +L  L+ + +  CS L   P  + ++  L+
Sbjct: 2   VPNDLQYMTSLKILNLKDCKQLHSLPTSIGNLLYLKNINIGRCSSLTSLPNELGNLTSLT 61

Query: 80  KLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
            L + G +S+  +P+ +  L  L  L +  C +L  LP+ +  L SL TL++S C  L +
Sbjct: 62  TLNIGGCSSMTSLPNELGNLTSLTTLIMWRCSSLTSLPNELGNLTSLTTLDVSECSSLTS 121

Query: 139 VPDTLGKVESLEELDVSGTAIRRPTSSIFL---MKNLRSLYFSGCNEPPASASWHLHL-- 193
           +P+ LG + SL  L++S   +   +S   L   + NL SL     N+  +  S    L  
Sbjct: 122 LPNELGNLTSLTTLNIS--DVNECSSLTLLPNELANLTSLTTLDVNKCSSLTSLPNELGN 179

Query: 194 --PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                 L    C     LP+ L  + SLT L++  C     ++P+++ NL SL  L +  
Sbjct: 180 LTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNIGGCS-SMTSLPNELGNLTSLTTLKIGG 238

Query: 251 -NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
            ++  +LP  +  L +L  L +  C  + SLP    NL  +     +GCSSL +L
Sbjct: 239 CSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNISGCSSLTSL 293



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 154/306 (50%), Gaps = 33/306 (10%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L + G +S+T +P+ +  LT L  L +  C +L+SLP  + +L  L TL++
Sbjct: 54  LGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLIMWRCSSLTSLPNELGNLTSLTTLDV 113

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL----DGTSIAEVPSSIELLPGLELLYLNECKNLVRL 115
           S CS L   P  + ++  L+ L +    + +S+  +P+ +  L  L  L +N+C +L  L
Sbjct: 114 SECSSLTSLPNELGNLTSLTTLNISDVNECSSLTLLPNELANLTSLTTLDVNKCSSLTSL 173

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRS 174
           P+ +  L SL TLN+ GC  + ++P+ LG + SL  L++ G +++    + +  + +L +
Sbjct: 174 PNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTT 233

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
           L   GC       S    LP N LG               + SLT L++  C     ++P
Sbjct: 234 LKIGGC-------SSLTSLP-NELGN--------------LTSLTTLNIGGCS-SMTSLP 270

Query: 235 SDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA- 292
           +++ NL SL  L ++  ++  +LP  +  L +L  L +  C  L SLP    NL  +   
Sbjct: 271 NELGNLTSLTTLNISGCSSLTSLPNELGNLTSLTTLNISGCSSLTSLPNELGNLTSLTTL 330

Query: 293 --NGCS 296
             +GCS
Sbjct: 331 NISGCS 336



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 5/163 (3%)

Query: 647 CSRLWEEADEFPDIVQV--LSDGTDIRELSLAIEL--LFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  +  L+ G      SL  EL  L  L  L + GC ++  LP  + 
Sbjct: 167 CSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNIGGCSSMTSLPNELG 226

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L+TL + G S     P    +   L  +++ G +++  LP  +  L+     N+  
Sbjct: 227 NLTSLTTLKIGGCSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNISG 286

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           C +L SLP+ +  L SL  +  SGCS L ++   LG + SL  
Sbjct: 287 CSSLTSLPNELGNLTSLTTLNISGCSSLTSLPNELGNLTSLTT 329



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 5/148 (3%)

Query: 645 GNCSRLWEEADEFPDIVQV--LSDGTDIRELSLAIEL--LFGLVQLTLNGCKNLERLPRT 700
           G CS +    +E  ++  +  L+ G      SL  EL  L  L  L + GC +L  LP  
Sbjct: 189 GGCSSMTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLKIGGCSSLTSLPNE 248

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           +  L  L+TLN+ G S     P    +   L  +++ G +++  LP  +  L+     N+
Sbjct: 249 LGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNISGCSSLTSLPNELGNLTSLTTLNI 308

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             C +L SLP+ +  L SL  +  SGCS
Sbjct: 309 SGCSSLTSLPNELGNLTSLTTLNISGCS 336



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 27/187 (14%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CS L    +E  ++  +    +SD  +   L+L    L  L  
Sbjct: 99  PNELGNLTSLTTLDVSECSSLTSLPNELGNLTSLTTLNISDVNECSSLTLLPNELANLTS 158

Query: 686 LT---LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LT   +N C +L  LP  +  L  L+TLN+ G S     P    +   L  +++ G +++
Sbjct: 159 LTTLDVNKCSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLNIGGCSSM 218

Query: 742 RGLPASIELLSGNI--LSNLK--DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             LP  +    GN+  L+ LK   C +L SLP+ +  L SL  +   GCS + ++   LG
Sbjct: 219 TSLPNEL----GNLTSLTTLKIGGCSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELG 274

Query: 798 KVESLEV 804
            + SL  
Sbjct: 275 NLTSLTT 281



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 8/168 (4%)

Query: 645 GNCSRLWEEADEFPDIVQV--LSDGTDIRELSLAIEL--LFGLVQLTLNGCKNLERLPRT 700
           G CS L    +E  ++  +  L+ G      SL  EL  L  L  L +  C +L  LP  
Sbjct: 42  GRCSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTTLIMWRCSSLTSLPNE 101

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL----EGTAIRGLPASIELLSGNIL 756
           +  L  L+TL++S  S     P    +   L  +++    E +++  LP  +  L+    
Sbjct: 102 LGNLTSLTTLDVSECSSLTSLPNELGNLTSLTTLNISDVNECSSLTLLPNELANLTSLTT 161

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            ++  C +L SLP+ +  L SL  +   GCS + ++   LG + SL  
Sbjct: 162 LDVNKCSSLTSLPNELGNLTSLTTLNIGGCSSMTSLPNELGNLTSLTT 209



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 1/120 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           L L  CK L  LP +I  L YL  +N+   S     P    +   L  +++ G +++  L
Sbjct: 15  LNLKDCKQLHSLPTSIGNLLYLKNINIGRCSSLTSLPNELGNLTSLTTLNIGGCSSMTSL 74

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P  +  L+      +  C +L SLP+ +  L SL  +  S CS L ++   LG + SL  
Sbjct: 75  PNELGNLTSLTTLIMWRCSSLTSLPNELGNLTSLTTLDVSECSSLTSLPNELGNLTSLTT 134


>gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana]
          Length = 1217

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 171/393 (43%), Gaps = 76/393 (19%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKC------ 53
            +++  +L +L L   +S+ E+PSSIE LT L++L L+ C +L  LP   ++ K       
Sbjct: 726  LSTATNLEELKLSNCSSLVELPSSIEKLTSLQILDLQSCSSLVELPSFGNATKLEILDLD 785

Query: 54   ----------------LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIE 96
                            L+ L L  CS+L + P  + +  +L KL + G +S+ ++PSSI 
Sbjct: 786  YCSSLVKLPPSINANNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGCSSLVKLPSSIG 845

Query: 97   LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             +  LE+L L+ C NLV LPSSI  L+ L  L + GC KLE +P  +             
Sbjct: 846  DITDLEVLDLSNCSNLVELPSSIGNLQKLIVLTMHGCSKLETLPININ------------ 893

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS---CPVALMLPSLT 213
                        +K L +LY + C+          ++ +  L  ++    P+++M  S  
Sbjct: 894  ------------LKALSTLYLTDCSRLKRFPEISTNIKYLWLTGTAIKEVPLSIMSWSRL 941

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
                ++  +     L E     DI     + +L L++ +   +P  +  +  L  L L +
Sbjct: 942  AEFRISYFE----SLKEFPHAFDI-----ITKLQLSK-DIQEVPPWVKRMSRLRVLSLNN 991

Query: 274  CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISM 333
            C  L SLPQ+  +L ++ A+ C SL  L         +    NC               +
Sbjct: 992  CNNLVSLPQLSDSLDYIHADNCKSLEKLDCCFNNPDIRLNFPNC-------------FKL 1038

Query: 334  LREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             +E  +L   + P   +  + PG+Q+P  F ++
Sbjct: 1039 NQEARDLIMHTSPC--IDAMLPGTQVPACFNHR 1069



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 16/242 (6%)

Query: 63  SKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           SKL+K  +    + +L  + L     + E+P+ +     LE L L+ C +LV LPSSI  
Sbjct: 694 SKLQKLWEGTKQLRNLKWMSLSYSIDLKELPN-LSTATNLEELKLSNCSSLVELPSSIEK 752

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLE--ELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           L SL+ L+L  C  L  +P + G    LE  +LD   + ++ P S      NL+ L    
Sbjct: 753 LTSLQILDLQSCSSLVELP-SFGNATKLEILDLDYCSSLVKLPPS--INANNLQELSLRN 809

Query: 180 CN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPS 235
           C+   E P S     +L    L    C   + LPS  G +  L  LDLS+C      +PS
Sbjct: 810 CSRLIELPLSIGTATNL--KKLNMKGCSSLVKLPSSIGDITDLEVLDLSNCS-NLVELPS 866

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
            I NL  L  L ++  +   TLP +I+ L  L  L L DC RL+  P+I  N++++   G
Sbjct: 867 SIGNLQKLIVLTMHGCSKLETLPININ-LKALSTLYLTDCSRLKRFPEISTNIKYLWLTG 925

Query: 295 CS 296
            +
Sbjct: 926 TA 927



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 27/166 (16%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L +      DI  +    LS+ +++ EL  +I  L  L+ LT++GC  LE LP  I+
Sbjct: 834 CSSLVKLPSSIGDITDLEVLDLSNCSNLVELPSSIGNLQKLIVLTMHGCSKLETLPININ 893

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG--------- 753
            LK LSTL L+  S+ + FPEI+++   L    L GTAI+ +P SI   S          
Sbjct: 894 -LKALSTLYLTDCSRLKRFPEISTNIKYLW---LTGTAIKEVPLSIMSWSRLAEFRISYF 949

Query: 754 ----------NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
                     +I++ L+  K+++ +P  +  +  LR++  + C+ L
Sbjct: 950 ESLKEFPHAFDIITKLQLSKDIQEVPPWVKRMSRLRVLSLNNCNNL 995



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 5/158 (3%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   +  ++  + LS   D++EL   +     L +L L+ C +L  LP +I  L  L
Sbjct: 698 KLWEGTKQLRNLKWMSLSYSIDLKELP-NLSTATNLEELKLSNCSSLVELPSSIEKLTSL 756

Query: 708 STLNLSGLSKFREFPEI-TSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
             L+L   S   E P    +++ ++L++    + ++ LP SI   +   LS L++C  L 
Sbjct: 757 QILDLQSCSSLVELPSFGNATKLEILDLDYCSSLVK-LPPSINANNLQELS-LRNCSRLI 814

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
            LP +I    +L+ +   GCS L  +  ++G +  LEV
Sbjct: 815 ELPLSIGTATNLKKLNMKGCSSLVKLPSSIGDITDLEV 852



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 38/198 (19%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           EL L+I     L +L + GC +L +LP +I  +  L  L+LS  S   E           
Sbjct: 815 ELPLSIGTATNLKKLNMKGCSSLVKLPSSIGDITDLEVLDLSNCSNLVE----------- 863

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
                       LP+SI  L   I+  +  C  L++LP  IN L++L  +Y + CS+LK 
Sbjct: 864 ------------LPSSIGNLQKLIVLTMHGCSKLETLPININ-LKALSTLYLTDCSRLKR 910

Query: 792 VTETLGKVESL--------EVRLS--SWNRPK--MQNDFDCVEQ--SAVETVTKLAKAEL 837
             E    ++ L        EV LS  SW+R      + F+ +++   A + +TKL  ++ 
Sbjct: 911 FPEISTNIKYLWLTGTAIKEVPLSIMSWSRLAEFRISYFESLKEFPHAFDIITKLQLSKD 970

Query: 838 LRDSDSWKKNVDKCMKLS 855
           +++   W K + +   LS
Sbjct: 971 IQEVPPWVKRMSRLRVLS 988


>gi|297790452|ref|XP_002863116.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308940|gb|EFH39375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1090

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 51/335 (15%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLE 102
           LP +I +L  L+ L+LS  S L + P  + ++ +L +L L   S + E+P SI     LE
Sbjct: 657 LPSSIGNLINLKELDLSSLSCLVELPSSIGNLINLKELDLSSLSCLVELPFSIGNATNLE 716

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
           +L L +C +LV+LP SI  L+ L+TL L GC KLE++P  + K+ SL ELD++   + + 
Sbjct: 717 VLNLRQCSSLVKLPFSIGNLQKLQTLTLRGCSKLEDLPANI-KLGSLGELDLTDCLLLKR 775

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
              I        L  +   E P+S                            + S ++L+
Sbjct: 776 FPEISTNVEFLRLDGTAIEEVPSS----------------------------IKSWSRLN 807

Query: 223 LSDCGLGE--AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
             D    E     P   D    + EL++        P  +     L  L L+ CK+L SL
Sbjct: 808 EVDMSYSENLKNFPHAFD---IITELHMTNTEIQEFPPWVKKFSRLTVLILKGCKKLVSL 864

Query: 281 PQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLEL 340
           PQIP ++ ++ A  C SL       +L  S +    C+   K  + N  A  ++      
Sbjct: 865 PQIPDSITYIYAEDCESLE------RLDCSFHNPNICLKFAKCFKLNQEARDLI------ 912

Query: 341 QAVSDPGHKLSIVFPGSQIPKWFMYQN-EGSSITV 374
             +  P    + V PG ++P +F +Q+  G S+T+
Sbjct: 913 --IQTPTSNYA-VLPGREVPAYFTHQSTTGGSLTI 944



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 55/207 (26%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++ +L +L L   S + E+P SI   T LE+L L+ C +L  LP +I +L+ L+TL L
Sbjct: 685 IGNLINLKELDLSSLSCLVELPFSIGNATNLEVLNLRQCSSLVKLPFSIGNLQKLQTLTL 744

Query: 60  SGCSK-----------------------LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
            GCSK                       LK+FP+I  ++E L    LDGT+I EVPSSI+
Sbjct: 745 RGCSKLEDLPANIKLGSLGELDLTDCLLLKRFPEISTNVEFLR---LDGTAIEEVPSSIK 801

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLN--------------------LSGCCK- 135
               L  + ++  +NL   P + + +  L   N                    L GC K 
Sbjct: 802 SWSRLNEVDMSYSENLKNFPHAFDIITELHMTNTEIQEFPPWVKKFSRLTVLILKGCKKL 861

Query: 136 --LENVPDTLGKV-----ESLEELDVS 155
             L  +PD++  +     ESLE LD S
Sbjct: 862 VSLPQIPDSITYIYAEDCESLERLDCS 888



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGN 754
           +LP +I  L  L  L+LS LS   E P    +   L E+ L   + +  LP SI   +  
Sbjct: 656 KLPSSIGNLINLKELDLSSLSCLVELPSSIGNLINLKELDLSSLSCLVELPFSIGNATNL 715

Query: 755 ILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            + NL+ C +L  LP +I  L+ L+ +   GCSKL+++
Sbjct: 716 EVLNLRQCSSLVKLPFSIGNLQKLQTLTLRGCSKLEDL 753



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L+G   +E +P +I +   L+ +++S     + FP    + D + E+H+  T I+  P
Sbjct: 786 LRLDGTA-IEEVPSSIKSWSRLNEVDMSYSENLKNFPH---AFDIITELHMTNTEIQEFP 841

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
             ++  S   +  LK CK L SLP   +   S+  +Y   C  L+ +
Sbjct: 842 PWVKKFSRLTVLILKGCKKLVSLPQIPD---SITYIYAEDCESLERL 885


>gi|342365828|gb|AEL30361.1| NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1119

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 171/408 (41%), Gaps = 58/408 (14%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L ++ L  + I ++    ++L  L  L L  CK L  +P  +S    L+TL+L GC +L
Sbjct: 393 ELVEIDLSHSKIVQLWDGKKVLKKLVHLNLSYCKELKEMP-DLSGAPNLKTLDLDGCEEL 451

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
             F   +A  + L +L L G    E       +  LE L L  C +L RLP     +K L
Sbjct: 452 NYFHPSLAHHKSLVELNLRGCERLETLGDKLEMSSLERLDLECCSSLRRLPEFGKCMKQL 511

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLR--SLYFSG 179
             L L     +E +P TLG +  + ELD++G    T++  P      +K LR   L    
Sbjct: 512 SILILKRT-GIEELPTTLGNLAGMSELDLTGCYKLTSLPFPLGCFVGLKKLRLSRLVELS 570

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALML--PSLTGVCSLTKLDL-------SDCGLGE 230
           C            +P++  G  S  V      P++ G+                 C    
Sbjct: 571 C------------VPYSTHGLESLTVKDYSGSPNIVGLLCSLSHLTSLSSLKLQGCFSTS 618

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
               +D   L SL +L L+ NNF+ +P SI  L  L  L+L +C+RL+ LP++P +L+ +
Sbjct: 619 REESTDFGRLASLTDLDLSENNFLRVPISIHELPRLTRLKLNNCRRLKVLPELPLSLREL 678

Query: 291 RANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL 350
           +A  C                       DSL     N + +     + E  A  D     
Sbjct: 679 QARDC-----------------------DSLDASNANDVILKACCGFAE-SASQDREDLF 714

Query: 351 SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNV--NKVVGFAICCVFQ 396
            + F   +IP WF +  EG+ ++V   S+ +N    + +  A+C + Q
Sbjct: 715 QMWFSRKKIPAWFEHHEEGNGVSV---SFSHNCPSTETIALALCFLLQ 759



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 27/164 (16%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           MK LS L L  T I E+P+++  L G+  L L GC  L+SLP  +     L+ L LS   
Sbjct: 508 MKQLSILILKRTGIEELPTTLGNLAGMSELDLTGCYKLTSLPFPLGCFVGLKKLRLSRLV 567

Query: 64  KLKKFPQIVASMEDLS-KLYLDGTSIA-------------------------EVPSSIEL 97
           +L   P     +E L+ K Y    +I                          E  +    
Sbjct: 568 ELSCVPYSTHGLESLTVKDYSGSPNIVGLLCSLSHLTSLSSLKLQGCFSTSREESTDFGR 627

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
           L  L  L L+E  N +R+P SI+ L  L  L L+ C +L+ +P+
Sbjct: 628 LASLTDLDLSE-NNFLRVPISIHELPRLTRLKLNNCRRLKVLPE 670



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 1/123 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L L GC+ LE L   +  +  L  L+L   S  R  PE      QL  + L+ T I 
Sbjct: 464 LVELNLRGCERLETLGDKLE-MSSLERLDLECCSSLRRLPEFGKCMKQLSILILKRTGIE 522

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP ++  L+G    +L  C  L SLP  +     L+ +  S   +L  V  +   +ESL
Sbjct: 523 ELPTTLGNLAGMSELDLTGCYKLTSLPFPLGCFVGLKKLRLSRLVELSCVPYSTHGLESL 582

Query: 803 EVR 805
            V+
Sbjct: 583 TVK 585


>gi|168010570|ref|XP_001757977.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690854|gb|EDQ77219.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 294

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 53/300 (17%)

Query: 35  LKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPS 93
           + GC +L+SLP  +++L  LR+L L+ C+ L   P  +  +  L +LYL D +S+  +P+
Sbjct: 1   MSGCTSLTSLPNEMANLSSLRSLHLNWCTSLLSLPNDLRKISSLKELYLVDCSSLKSLPN 60

Query: 94  SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK-LENVPDTLGKVESLEEL 152
            ++ L  LE L L+ C +L  LP+ +  L SLK LNLS C   L ++P+ L  + SL+ L
Sbjct: 61  ELKNLSSLERLDLSHCSSLTSLPNELENLSSLKILNLSHCSSFLTSLPNDLANLSSLKRL 120

Query: 153 DVS--GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP 210
           D+S   + I  P      M NL SL                    NL G   C   + LP
Sbjct: 121 DLSHCSSLICLPND----MANLSSLK-----------------KLNLSG---CLSLICLP 156

Query: 211 S-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR------------------- 250
           + +  + SL KLDLS C L   ++P+ + NL SL +L LN                    
Sbjct: 157 NDMANLSSLIKLDLSGC-LSLNSLPNILKNLSSLTKLSLNSCSSYDLAILSSLTTLSLIC 215

Query: 251 -NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR---ANGCSSLVTLFGALK 306
            ++ ++LP  ++ L +L  L+L  C  L SLP    NL  ++    +GCSSL +L   LK
Sbjct: 216 CSSLISLPNELANLSSLIRLDLSGCLSLTSLPNELTNLSSLKRLDLSGCSSLTSLPNELK 275



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 5/167 (2%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+  +P+ +  L+ L+ L L GC +L  LP  +++L  L  L+LSGC  L   P I+ +
Sbjct: 126 SSLICLPNDMANLSSLKKLNLSGCLSLICLPNDMANLSSLIKLDLSGCLSLNSLPNILKN 185

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           +  L+KL L+  S  +    + +L  L  L L  C +L+ LP+ +  L SL  L+LSGC 
Sbjct: 186 LSSLTKLSLNSCSSYD----LAILSSLTTLSLICCSSLISLPNELANLSSLIRLDLSGCL 241

Query: 135 KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
            L ++P+ L  + SL+ LD+SG +++    + +  + +LR L  S C
Sbjct: 242 SLTSLPNELTNLSSLKRLDLSGCSSLTSLPNELKNLSSLRRLTLSCC 288



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 4/124 (3%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L++L L+GC +L  LP  +  L  L+ L+L+  S +     I SS   L  I    +
Sbjct: 162 LSSLIKLDLSGCLSLNSLPNILKNLSSLTKLSLNSCSSYDL--AILSSLTTLSLIC--CS 217

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           ++  LP  +  LS  I  +L  C +L SLP+ +  L SL+ +  SGCS L ++   L  +
Sbjct: 218 SLISLPNELANLSSLIRLDLSGCLSLTSLPNELTNLSSLKRLDLSGCSSLTSLPNELKNL 277

Query: 800 ESLE 803
            SL 
Sbjct: 278 SSLR 281


>gi|110741602|dbj|BAE98749.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 82/374 (21%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           LK L+ ++L+    LK+ P + ++  +L   YLD   S+ E+PSS   L  LE L +N C
Sbjct: 462 LKNLKYMDLTESKNLKELPDL-SNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNC 520

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            NL  +P+ +N L S+K +N+ GC +L   P     +E+L   D+S              
Sbjct: 521 INLQVIPAHMN-LTSVKQVNMKGCSRLRKFPVISRHIEAL---DISDNT----------- 565

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS--DCG 227
             L  +       P + ASW                          C L  LD+S  +  
Sbjct: 566 -ELEDM-------PASIASW--------------------------CHLVYLDMSHNEKL 591

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            G   +P+      SL+ L L+  +  ++P  I  L  LEEL L  C RL SLP +P ++
Sbjct: 592 QGLTQLPT------SLRHLNLSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSI 645

Query: 288 QFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
           + + A  C SL ++   L    ++ +  NC       +  G A    RE +  ++    G
Sbjct: 646 KALEAEDCESLESVSSPLYTPSARLSFTNC------FKLGGEA----REAIIRRSSDSTG 695

Query: 348 HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
              S++ PG ++P  F ++ +G+S+++  P     +     F +C V   P+H       
Sbjct: 696 ---SVLLPGREVPAEFDHRAQGNSLSILLP-----LGGNSQFMVCVVIS-PRHDITKMSN 746

Query: 408 HSYPAHELECSMDG 421
            S    EL C ++G
Sbjct: 747 ES----ELLCRING 756



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 23/145 (15%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L +N C NL+ +P  ++ L  +  +N+ G S+ R+FP + S   + L+I  + T
Sbjct: 509 LHKLEWLEMNNCINLQVIPAHMN-LTSVKQVNMKGCSRLRKFP-VISRHIEALDIS-DNT 565

Query: 740 AIRGLPASI--------------ELLSG--NILSNLKDCK----NLKSLPSTINGLRSLR 779
            +  +PASI              E L G   + ++L+       +++S+P  I  L  L 
Sbjct: 566 ELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTSLRHLNLSYTDIESIPDCIKALHQLE 625

Query: 780 MMYPSGCSKLKNVTETLGKVESLEV 804
            +  SGC++L ++ +    +++LE 
Sbjct: 626 ELCLSGCTRLASLPDLPCSIKALEA 650


>gi|223403523|gb|ACM89261.1| disease resistance protein (TIR-NBS-LRR class) [Arabidopsis thaliana]
          Length = 1163

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 214/518 (41%), Gaps = 127/518 (24%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSL-PVTISSLKCLRTLE 58
            +++ K+L  L L+G TS+ ++P  +E +  L  L ++ C +L+ L  + +SSLK L    
Sbjct: 720  LSNAKNLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKILI--- 776

Query: 59   LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            LS CSKL++F  I    E+L +LYLDGT+I                          LP +
Sbjct: 777  LSDCSKLEEFEVI---SENLEELYLDGTAIK------------------------GLPPA 809

Query: 119  INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
               L  L  LN+ GC +LE++P  LGK ++L+E                       L  S
Sbjct: 810  AGDLTRLVVLNMEGCTELESLPKRLGKQKALQE-----------------------LVLS 846

Query: 179  GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
            GC++  +                       +P++       ++ L D G     IP    
Sbjct: 847  GCSKLES-----------------------VPTVVQDMKHLRILLLD-GTRIRKIPK--- 879

Query: 239  NLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             + SLK L L+RN   V L  ++     L+ L +++C+ L+ LP +P  L+++   GC  
Sbjct: 880  -IKSLKCLCLSRNIAMVNLQDNLKDFYYLKCLVMKNCENLRYLPSLPKCLEYLNVYGCER 938

Query: 298  LVTL----------FGALKLCRSKYTIINC-------IDSLKLLRK---NGLAISMLREY 337
            L ++             L+  RS +   NC        DS+    K   + LA+    E 
Sbjct: 939  LESVENPLVSDRLFLDGLEKLRSTFLFTNCHNLFQDAKDSISTYAKWKCHRLAV----EC 994

Query: 338  LELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV 397
             E   VS  G   +  +PG  +P WF +Q  GS +      + YN   + G A+C V  V
Sbjct: 995  YEQDKVS--GAFFNTCYPGYIVPSWFDHQAVGSVLEPRLEPHWYNT-MLSGIALCAV--V 1049

Query: 398  PKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFR---GKF---GHVVSDHLWLLF----- 446
              H     +  S+    ++C++    E   + F    G F   G + +DH+++ +     
Sbjct: 1050 SFHENQDPIIGSF---SVKCTLQFENEDGSLRFDCDIGCFNEPGMIEADHVFIGYVTCSR 1106

Query: 447  LPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIY 484
            L  H          +++ F        KV  CGF  +Y
Sbjct: 1107 LKDHHSIPIHHPTTVKMKFHLTDACKSKVVDCGFRLMY 1144



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 25/146 (17%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLN----------------------LSGLSKFRE 720
           L +L L GC +L +LP+ +  +K L  LN                      LS  SK  E
Sbjct: 726 LERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKILILSDCSKLEE 785

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           F  I+   + L E++L+GTAI+GLP +   L+  ++ N++ C  L+SLP  +   ++L+ 
Sbjct: 786 FEVIS---ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQE 842

Query: 781 MYPSGCSKLKNVTETLGKVESLEVRL 806
           +  SGCSKL++V   +  ++ L + L
Sbjct: 843 LVLSGCSKLESVPTVVQDMKHLRILL 868



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 23/171 (13%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           +CS+L E      ++ ++  DGT I+ L  A   L  LV L + GC  LE LP+ +   K
Sbjct: 779 DCSKLEEFEVISENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQK 838

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL----LSGNIL----- 756
            L  L LSG SK    P +      L  + L+GT IR +P    L    LS NI      
Sbjct: 839 ALQELVLSGCSKLESVPTVVQDMKHLRILLLDGTRIRKIPKIKSLKCLCLSRNIAMVNLQ 898

Query: 757 SNLKD-----------CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            NLKD           C+NL+ LPS    L  L +    GC +L++V   L
Sbjct: 899 DNLKDFYYLKCLVMKNCENLRYLPSLPKCLEYLNVY---GCERLESVENPL 946



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 89/227 (39%), Gaps = 57/227 (25%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E+L  L L  +SI +V   ++  P L+   L+    L  L    N  K+L+ LNL GC  
Sbjct: 678 ENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLGLSNA-KNLERLNLEGCTS 736

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L  +P                            M+N++SL F                  
Sbjct: 737 LLKLPQE--------------------------MENMKSLVF------------------ 752

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRNNFV 254
             L    C     L S+  V SL  L LSDC  L E  + S+     +L+ELYL+     
Sbjct: 753 --LNMRRCTSLTCLQSIK-VSSLKILILSDCSKLEEFEVISE-----NLEELYLDGTAIK 804

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSL 298
            LP +   L  L  L +E C  L+SLP+       LQ +  +GCS L
Sbjct: 805 GLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQELVLSGCSKL 851


>gi|297794745|ref|XP_002865257.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311092|gb|EFH41516.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1838

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 182/403 (45%), Gaps = 78/403 (19%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L DL ++ + +  + S ++LL  L++++L+   +L  +P  +S    L  L+L  CS LK
Sbjct: 1339 LVDLIMEASKLETLWSGLKLLNSLKVMSLRCSLDLREIP-DLSLATNLERLDLGHCSSLK 1397

Query: 67   KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                                    +PSSI  L  L+ L +  C  L  LP+ IN LKSL 
Sbjct: 1398 M-----------------------LPSSIGHLHKLKDLDMEFCTYLEALPTGIN-LKSLY 1433

Query: 127  TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
             LNL+GC +L + P       ++ +L + GTAI    + I  + +L  L  +GC +    
Sbjct: 1434 YLNLNGCSQLRSFPQI---STNISDLYLDGTAIEEVPTWIENISSLSYLSMNGCKK---- 1486

Query: 187  ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC-GLGEAAIPSDIDNLH-SLK 244
                       L K S       P+++ +  L ++D S+C  L E + P+    +  S+ 
Sbjct: 1487 -----------LKKIS-------PNISKLKLLAEVDFSECTALTEDSWPNHPGGIFTSIM 1528

Query: 245  ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
             + ++ N+F +LP + + +   ++L   +C+ L SLP++P +L  + AN C SL  L G+
Sbjct: 1529 RVDMSGNSFKSLPDTWTSI-QPKDLIFNNCRNLASLPELPASLSMLMANNCGSLENLNGS 1587

Query: 305  LKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFM 364
                +     INC              S+  +  EL   SD  +    + PG ++P  F 
Sbjct: 1588 FDYPQMALQFINC-------------FSLNHQARELILQSDCAYA---ILPGGELPAHFT 1631

Query: 365  YQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
            ++  GS +T+    YL+   K   F  C V +     +G++ F
Sbjct: 1632 HRAYGSVLTI----YLF--KKFPTFKACIVVE---SRSGSFTF 1665



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 98/159 (61%), Gaps = 22/159 (13%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L +LYL GT++ +V    +L   LELL   G + L SLP  +++L+ L+ L+LSGCS+
Sbjct: 785 RNLKELYLVGTAVRQVA---QLPQSLELLNAHGSR-LRSLP-NMANLELLKVLDLSGCSR 839

Query: 65  L---KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           L   + FP+      +L +LYL GT++ +VP     LP   L ++N   + +R  S++  
Sbjct: 840 LATIQSFPR------NLKELYLAGTAVRQVPQ----LPQ-SLEFMNAHGSRLRSLSNMAN 888

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           L+ LK L+LSGC +L+ +    G   +L+ELD++GT++R
Sbjct: 889 LELLKVLDLSGCSRLDTIK---GLPRNLKELDIAGTSVR 924



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 137/310 (44%), Gaps = 79/310 (25%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL---KKFPQIV 72
           S+ E   S + L  L  L LK C  L SLP  +++L+ L+ L+LSGCS+L   + FP+  
Sbjct: 729 SLQESSLSCQDLGKLICLDLKDCFLLRSLP-NMANLELLKVLDLSGCSRLNTIQSFPR-- 785

Query: 73  ASMEDLSKLYLDGTS---IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
               +L +LYL GT+   +A++P S+ELL             L  LP+  N L+ LK L+
Sbjct: 786 ----NLKELYLVGTAVRQVAQLPQSLELLNA-------HGSRLRSLPNMAN-LELLKVLD 833

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           LSGC +L  +        +L+EL ++GTA+R+      L ++L  +   G      S   
Sbjct: 834 LSGCSRLATIQSF---PRNLKELYLAGTAVRQVPQ---LPQSLEFMNAHGSRLRSLSNMA 887

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
           +L L                        L  LDLS C        S +D +  L      
Sbjct: 888 NLEL------------------------LKVLDLSGC--------SRLDTIKGLPR---- 911

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
                          NL+EL++     ++ LPQ+P +L+ + ++GC SL ++    +   
Sbjct: 912 ---------------NLKELDIAGTS-VRGLPQLPQSLELLNSHGCVSLTSIRLDFEKLP 955

Query: 310 SKYTIINCID 319
             Y   NC D
Sbjct: 956 MHYNFSNCFD 965



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 7/137 (5%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            ++SDLYLDGT+I EVP+ IE ++ L  L++ GCK L  +   IS LK L  ++ S C+ L
Sbjct: 1452 NISDLYLDGTAIEEVPTWIENISSLSYLSMNGCKKLKKISPNISKLKLLAEVDFSECTAL 1511

Query: 66   KK--FPQIVASM-EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
             +  +P     +   + ++ + G S   +P +   +   +L++ N C+NL  LP      
Sbjct: 1512 TEDSWPNHPGGIFTSIMRVDMSGNSFKSLPDTWTSIQPKDLIF-NNCRNLASLPELP--- 1567

Query: 123  KSLKTLNLSGCCKLENV 139
             SL  L  + C  LEN+
Sbjct: 1568 ASLSMLMANNCGSLENL 1584



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 15/153 (9%)

Query: 647  CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            CS+L        +I  +  DGT I E+   IE +  L  L++NGCK L+++   IS LK 
Sbjct: 1440 CSQLRSFPQISTNISDLYLDGTAIEEVPTWIENISSLSYLSMNGCKKLKKISPNISKLKL 1499

Query: 707  LSTLNLSGLSKFRE--FPE----ITSSRDQLLEIHLEGTAIRGLPAS-IELLSGNILSNL 759
            L+ ++ S  +   E  +P     I +S   ++ + + G + + LP +   +   +++ N 
Sbjct: 1500 LAEVDFSECTALTEDSWPNHPGGIFTS---IMRVDMSGNSFKSLPDTWTSIQPKDLIFN- 1555

Query: 760  KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
             +C+NL SLP       SL M+  + C  L+N+
Sbjct: 1556 -NCRNLASLPELP---ASLSMLMANNCGSLENL 1584



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 29/141 (20%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            + ++ L  +I  L  L  L +  C  LE LP  I+ LK L  LNL+G S+ R FP+I+++
Sbjct: 1394 SSLKMLPSSIGHLHKLKDLDMEFCTYLEALPTGIN-LKSLYYLNLNGCSQLRSFPQISTN 1452

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
               + +++L+GTAI  +P  IE +S                        SL  +  +GC 
Sbjct: 1453 ---ISDLYLDGTAIEEVPTWIENIS------------------------SLSYLSMNGCK 1485

Query: 788  KLKNVTETLGKVESL-EVRLS 807
            KLK ++  + K++ L EV  S
Sbjct: 1486 KLKKISPNISKLKLLAEVDFS 1506



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 18/179 (10%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++E SL+ + L  L+ L L  C  L  LP  ++ L+ L  L+LSG S+      I S   
Sbjct: 730 LQESSLSCQDLGKLICLDLKDCFLLRSLP-NMANLELLKVLDLSGCSRLNT---IQSFPR 785

Query: 730 QLLEIHLEGTAIRG---LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            L E++L GTA+R    LP S+ELL+ +          L+SLP+  N L  L+++  SGC
Sbjct: 786 NLKELYLVGTAVRQVAQLPQSLELLNAH-------GSRLRSLPNMAN-LELLKVLDLSGC 837

Query: 787 SKLKNVTETLGKVESLEVRLSSWNR-PKMQN--DFDCVEQSAVETVTKLAKAELLRDSD 842
           S+L  +      ++ L +  ++  + P++    +F     S + +++ +A  ELL+  D
Sbjct: 838 SRLATIQSFPRNLKELYLAGTAVRQVPQLPQSLEFMNAHGSRLRSLSNMANLELLKVLD 896



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 11/97 (11%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L +LYL GT++ +VP   +L   LE +   G + L SL   +++L+ L+ L+LSGCS+
Sbjct: 848 RNLKELYLAGTAVRQVP---QLPQSLEFMNAHGSR-LRSLS-NMANLELLKVLDLSGCSR 902

Query: 65  LKKFPQIVASMEDLSKLYLDGTSI---AEVPSSIELL 98
           L     I     +L +L + GTS+    ++P S+ELL
Sbjct: 903 LDT---IKGLPRNLKELDIAGTSVRGLPQLPQSLELL 936


>gi|145326642|ref|NP_001077768.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145337141|ref|NP_176562.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196019|gb|AEE34140.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196020|gb|AEE34141.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 964

 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 82/374 (21%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           LK L+ ++L+    LK+ P + ++  +L   YLD   S+ E+PSS   L  LE L +N C
Sbjct: 462 LKNLKYMDLTESKNLKELPDL-SNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNC 520

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            NL  +P+ +N L S+K +N+ GC +L   P     +E+L   D+S              
Sbjct: 521 INLQVIPAHMN-LTSVKQVNMKGCSRLRKFPVISRHIEAL---DISDNT----------- 565

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS--DCG 227
             L  +       P + ASW                          C L  LD+S  +  
Sbjct: 566 -ELEDM-------PASIASW--------------------------CHLVYLDMSHNEKL 591

Query: 228 LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            G   +P+      SL+ L L+  +  ++P  I  L  LEEL L  C RL SLP +P ++
Sbjct: 592 QGLTQLPT------SLRHLNLSYTDIESIPDCIKALHQLEELCLSGCTRLASLPDLPCSI 645

Query: 288 QFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG 347
           + + A  C SL ++   L    ++ +  NC       +  G A    RE +  ++    G
Sbjct: 646 KALEAEDCESLESVSSPLYTPSARLSFTNC------FKLGGEA----REAIIRRSSDSTG 695

Query: 348 HKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLF 407
              S++ PG ++P  F ++ +G+S+++  P     +     F +C V   P+H       
Sbjct: 696 ---SVLLPGREVPAEFDHRAQGNSLSILLP-----LGGNSQFMVCVVIS-PRHDITKMSN 746

Query: 408 HSYPAHELECSMDG 421
            S    EL C ++G
Sbjct: 747 ES----ELLCRING 756



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 23/145 (15%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L +N C NL+ +P  ++ L  +  +N+ G S+ R+FP + S   + L+I  + T
Sbjct: 509 LHKLEWLEMNNCINLQVIPAHMN-LTSVKQVNMKGCSRLRKFP-VISRHIEALDIS-DNT 565

Query: 740 AIRGLPASI--------------ELLSG--NILSNLKDCK----NLKSLPSTINGLRSLR 779
            +  +PASI              E L G   + ++L+       +++S+P  I  L  L 
Sbjct: 566 ELEDMPASIASWCHLVYLDMSHNEKLQGLTQLPTSLRHLNLSYTDIESIPDCIKALHQLE 625

Query: 780 MMYPSGCSKLKNVTETLGKVESLEV 804
            +  SGC++L ++ +    +++LE 
Sbjct: 626 ELCLSGCTRLASLPDLPCSIKALEA 650


>gi|13517472|gb|AAK28808.1|AF310961_1 resistance-like protein P3-A [Linum usitatissimum]
          Length = 1110

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 184/418 (44%), Gaps = 70/418 (16%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISS--LKCLR--TLELSGCSKLKKFPQ 70
             S+ EVP  ++ LT L  L +  CKNL  LP  + S  LK +R   LE++ C      P+
Sbjct: 710  VSLVEVPFHVQYLTKLVTLDINYCKNLKRLPPKLDSKLLKHVRMKNLEVTCC------PE 763

Query: 71   IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            I +   +L +  L GTS+ E+PS+I  +    +L L+  KN+ + P     LK  K   L
Sbjct: 764  IDS--RELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG-KNITKFPGITTILKRFK---L 817

Query: 131  SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
            SG               S+ E+D++    +  TS   L+    +L  +G  +     +  
Sbjct: 818  SGT--------------SIREIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSI 863

Query: 191  LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             ++    L   S P+   LP ++  + +LT L +  C     +IP+ I NL SL  L L 
Sbjct: 864  WNMISEELFICSSPLIESLPEISEPMSTLTSLHVF-CCRSLTSIPTSISNLRSLISLCLV 922

Query: 250  RNNFVTLPASISGLLNLEELELEDCKRLQ------------------------SLPQIPP 285
                 +LP+SI  L  L  ++L DCK L+                        SLP++PP
Sbjct: 923  ETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPP 982

Query: 286  NLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSD 345
            NL+ +  +GC SL  L      C+  Y      D    L +  +    +  +L + A   
Sbjct: 983  NLKTLNVSGCKSLQAL--PSNTCKLLYLNTIHFDGCPQLDQ-AIPGEFVANFL-VHASLS 1038

Query: 346  PGHKLSIVFPGSQIPKWFMYQN----EGSSITVTRPSYLYNVNK----VVGFAICCVF 395
            P ++  +   GS++PKWF Y++    + S++ V  P  L N +     + G A  CVF
Sbjct: 1039 PSYERQVRCSGSELPKWFSYRSMEDEDCSTVKVELP--LANDSPDHPMIKGIAFGCVF 1094



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 10/176 (5%)

Query: 9    DLYLDGTSITEV-PSSIELLTGLELLTLKGCKN--LSSLPVTISSLKCLRTLELSGCSKL 65
            +L L G    EV P+SI  +   EL     C +  + SLP     +  L +L +  C  L
Sbjct: 847  NLSLTGNRQLEVLPNSIWNMISEELFI---CSSPLIESLPEISEPMSTLTSLHVFCCRSL 903

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
               P  ++++  L  L L  T I  +PSSI+ L  L  + L +CK+L  +P+SI+ L  L
Sbjct: 904  TSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKL 963

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
             TL++SGC  + ++P+      +L+ L+VSG  +++   S+   +  L +++F GC
Sbjct: 964  VTLSMSGCEIIISLPEL---PPNLKTLNVSGCKSLQALPSNTCKLLYLNTIHFDGC 1016



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 26/139 (18%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +++++ L  L L  T I  +PSSI+ L  L  + L+ CK+L S+P +I  L  L TL +S
Sbjct: 910  ISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMS 969

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            GC  +   P                          EL P L+ L ++ CK+L  LPS+  
Sbjct: 970  GCEIIISLP--------------------------ELPPNLKTLNVSGCKSLQALPSNTC 1003

Query: 121  GLKSLKTLNLSGCCKLENV 139
             L  L T++  GC +L+  
Sbjct: 1004 KLLYLNTIHFDGCPQLDQA 1022



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 37/186 (19%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIE----------LLFGLVQLTLNGCKNLERLPRTI 701
           +FP I  +L      GT IRE+ LA            LL     L+L G + LE LP +I
Sbjct: 804 KFPGITTILKRFKLSGTSIREIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSI 863

Query: 702 -----------------------SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
                                    +  L++L++         P   S+   L+ + L  
Sbjct: 864 WNMISEELFICSSPLIESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVE 923

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T I+ LP+SI+ L      +L+DCK+L+S+P++I+ L  L  +  SGC  + ++ E    
Sbjct: 924 TGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPN 983

Query: 799 VESLEV 804
           +++L V
Sbjct: 984 LKTLNV 989



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 24/264 (9%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS- 63
            ++L +  L GTS+ E+PS+I  +    +L L G KN++  P   + LK     +LSG S 
Sbjct: 767  RELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG-KNITKFPGITTILK---RFKLSGTSI 822

Query: 64   ---KLKKFPQIVASMEDL-----SKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVR 114
                L  + Q   + + L       L L G    EV P+SI  +   E L++     +  
Sbjct: 823  REIDLADYHQQHQTSDGLLLPKFHNLSLTGNRQLEVLPNSIWNMIS-EELFICSSPLIES 881

Query: 115  LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
            LP     + +L +L++  C  L ++P ++  + SL  L +  T I+   SSI  ++ L S
Sbjct: 882  LPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFS 941

Query: 175  LYFSGCNE-PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
            +    C        S H       L  S C + + LP L    +L  L++S C     A+
Sbjct: 942  IDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPELPP--NLKTLNVSGCK-SLQAL 998

Query: 234  PSDIDNLHSLKELYLNRNNFVTLP 257
            PS+     + K LYLN  +F   P
Sbjct: 999  PSN-----TCKLLYLNTIHFDGCP 1017



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 26/122 (21%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I+ L  +I+ L  L  + L  CK+LE +P +I  L  L TL++SG       PE    
Sbjct: 924  TGIKSLPSSIQELRQLFSIDLRDCKSLESIPNSIHKLSKLVTLSMSGCEIIISLPE---- 979

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                            LP +++ L      N+  CK+L++LPS    L  L  ++  GC 
Sbjct: 980  ----------------LPPNLKTL------NVSGCKSLQALPSNTCKLLYLNTIHFDGCP 1017

Query: 788  KL 789
            +L
Sbjct: 1018 QL 1019



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISA--LKYLSTLNLSGLSKFREFPEITSSRD 729
           E+   ++ L  LV L +N CKNL+RLP  + +  LK++   NL    +    PEI S   
Sbjct: 714 EVPFHVQYLTKLVTLDINYCKNLKRLPPKLDSKLLKHVRMKNL----EVTCCPEIDSR-- 767

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           +L E  L GT++  LP++I  +  N +  L   KN+   P     L+  ++
Sbjct: 768 ELEEFDLSGTSLGELPSAIYNVKQNGVLRLHG-KNITKFPGITTILKRFKL 817


>gi|242069265|ref|XP_002449909.1| hypothetical protein SORBIDRAFT_05g025470 [Sorghum bicolor]
 gi|241935752|gb|EES08897.1| hypothetical protein SORBIDRAFT_05g025470 [Sorghum bicolor]
          Length = 1219

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 137/267 (51%), Gaps = 18/267 (6%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P  I  L+ L+ L + G   +S+LP +I  L CL+ L +SGCS + K P+    ++ + 
Sbjct: 405 LPECITELSKLQYLNINGSSKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKCMV 464

Query: 80  KLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
            L + G T I E+P S+  L  L+LL L+ C NL  +P S+ GL  L+ LNLS C  L+ 
Sbjct: 465 ILDMSGCTGITELPDSLGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQ 524

Query: 139 VPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLP 194
           +P T+G +  L+ L +S  + + +   S   +K +  L    C    E P S    ++L 
Sbjct: 525 LPKTIGMLGCLKYLSLSSCSGMSKLPESFGDLKCMVHLDMPNCAGIMELPDSLGNLMNLQ 584

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTK---LDLSDCGLGEAAIPSDIDNLHSLKELYLNR- 250
           +  L  S C     +P    +C+LTK   L+LS C   +  IP  I NL +LK  YLN  
Sbjct: 585 Y--LQLSGCSNLKAIPE--SLCTLTKLQYLNLSSCFFLD-RIPEAIGNLIALK--YLNMS 637

Query: 251 --NNFVTLPASISGLLNLEELELEDCK 275
             +    LP S+  L NL  L+L  C+
Sbjct: 638 SCDKIRELPESLMKLQNLLHLDLSRCR 664



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 9/256 (3%)

Query: 47  TISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL 106
             S  K LRTL  S CS +   P  +  ++ L  L         +P  I  L  L+ L +
Sbjct: 362 AFSFAKYLRTLNFSECSGIL-LPASIGKLKQLRCLIAPRMQNESLPECITELSKLQYLNI 420

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSS 165
           N    +  LP SI  L  LK L++SGC  +  +P++ G ++ +  LD+SG T I     S
Sbjct: 421 NGSSKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKCMVILDMSGCTGITELPDS 480

Query: 166 IFLMKNLRSLYFSGCNEPPA-SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK-LDL 223
           +  + NL+ L  SGC+   A   S +       L  S C     LP   G+    K L L
Sbjct: 481 LGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQLPKTIGMLGCLKYLSL 540

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           S C  G + +P    +L  +  L + N    + LP S+  L+NL+ L+L  C  L+++P+
Sbjct: 541 SSCS-GMSKLPESFGDLKCMVHLDMPNCAGIMELPDSLGNLMNLQYLQLSGCSNLKAIPE 599

Query: 283 ---IPPNLQFVRANGC 295
                  LQ++  + C
Sbjct: 600 SLCTLTKLQYLNLSSC 615



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           ++  + I  L  +I  L  L  L ++GC N+ +LP +   LK +  L++SG +   E P+
Sbjct: 420 INGSSKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKCMVILDMSGCTGITELPD 479

Query: 724 ITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  + L G + ++ +P S+  L+     NL  C+NL  LP TI  L  L+ + 
Sbjct: 480 SLGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQLPKTIGMLGCLKYLS 539

Query: 783 PSGCSKLKNVTETLGKVESL 802
            S CS +  + E+ G ++ +
Sbjct: 540 LSSCSGMSKLPESFGDLKCM 559



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L +L + G  +T VP S+  L  LE+L L+ C  +S+LP  +  L  L++L +SGC  +K
Sbjct: 1089 LRELRISGYELTSVPESMRRLASLEMLELEWCDGISALPEWLDELSSLKSLVISGCKSIK 1148

Query: 67   KFPQIVASMEDLSKLYL 83
              P  +  +  L KL++
Sbjct: 1149 SLPPCIQHLTKLQKLHI 1165



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L +NG   +  LP +I  L  L  L++SG S   + PE       ++ + + G T I
Sbjct: 415 LQYLNINGSSKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKCMVILDMSGCTGI 474

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP S+  L+   L  L  C NLK++P ++ GL  L+ +  S C  L  + +T+G +  
Sbjct: 475 TELPDSLGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNLDQLPKTIGMLGC 534

Query: 802 LE 803
           L+
Sbjct: 535 LK 536



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPD----IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS + +  + F D    ++  +S  T I EL  ++  L  L  L L+GC NL+ +P ++ 
Sbjct: 447 CSNISKLPESFGDLKCMVILDMSGCTGITELPDSLGNLTNLQLLQLSGCSNLKAIPESLY 506

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L  LNLS      + P+       L  + L   + +  LP S   L   +  ++ +
Sbjct: 507 GLTQLQYLNLSFCRNLDQLPKTIGMLGCLKYLSLSSCSGMSKLPESFGDLKCMVHLDMPN 566

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           C  +  LP ++  L +L+ +  SGCS LK + E+L  +  L+
Sbjct: 567 CAGIMELPDSLGNLMNLQYLQLSGCSNLKAIPESLCTLTKLQ 608



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 28/156 (17%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK--------- 67
           +  +P +I  L  L+ L +  C  +  LP ++  L+ L  L+LS C   +K         
Sbjct: 618 LDRIPEAIGNLIALKYLNMSSCDKIRELPESLMKLQNLLHLDLSRCRGFRKGSLGALCGL 677

Query: 68  ---------------FPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLELLYLN-ECK 110
                             +   +E+L+KL YL  + I  +P SI  L  LE L L+  C 
Sbjct: 678 TTLQHLDMSQLRSIDLEDLSDVLENLTKLKYLRLSLIDSLPESIGNLTNLEHLDLSGNC- 736

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
            L  LP SI  LK L TL+LS C  L+++P+++G +
Sbjct: 737 -LPCLPQSIGNLKRLHTLDLSYCFGLKSLPESIGAL 771



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 6/146 (4%)

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSG 753
           E LP  I+ L  L  LN++G SK    PE       L  +H+ G + I  LP S   L  
Sbjct: 403 ESLPECITELSKLQYLNINGSSKISALPESIGKLGCLKYLHMSGCSNISKLPESFGDLKC 462

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR-- 811
            ++ ++  C  +  LP ++  L +L+++  SGCS LK + E+L  +  L+    S+ R  
Sbjct: 463 MVILDMSGCTGITELPDSLGNLTNLQLLQLSGCSNLKAIPESLYGLTQLQYLNLSFCRNL 522

Query: 812 ---PKMQNDFDCVEQSAVETVTKLAK 834
              PK      C++  ++ + + ++K
Sbjct: 523 DQLPKTIGMLGCLKYLSLSSCSGMSK 548



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 78   LSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
            L +L + G  +  VP S+  L  LE+L L  C  +  LP  ++ L SLK+L +SGC  ++
Sbjct: 1089 LRELRISGYELTSVPESMRRLASLEMLELEWCDGISALPEWLDELSSLKSLVISGCKSIK 1148

Query: 138  NVPDTLGKVESLEELDV 154
            ++P  +  +  L++L +
Sbjct: 1149 SLPPCIQHLTKLQKLHI 1165



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 21/171 (12%)

Query: 646 NCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NC+ + E  D   +++ +    LS  ++++ +  ++  L  L  L L+ C  L+R+P  I
Sbjct: 566 NCAGIMELPDSLGNLMNLQYLQLSGCSNLKAIPESLCTLTKLQYLNLSSCFFLDRIPEAI 625

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL-PASIELLSGNI----- 755
             L  L  LN+S   K RE PE       LL  HL+ +  RG    S+  L G       
Sbjct: 626 GNLIALKYLNMSSCDKIRELPESLMKLQNLL--HLDLSRCRGFRKGSLGALCGLTTLQHL 683

Query: 756 -LSNLK--DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +S L+  D ++L  +   +  L+ LR+      S + ++ E++G + +LE
Sbjct: 684 DMSQLRSIDLEDLSDVLENLTKLKYLRL------SLIDSLPESIGNLTNLE 728


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 23/299 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L+L     T +P  I+ L  L+ L L   +  ++LP  I +L+ L+ L L+
Sbjct: 223 IGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNR-FTTLPKEIGNLQKLQKLSLA 281

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  ++ L +L L G  +  +P  I  L  L+ L L + + L  +P  I 
Sbjct: 282 H-NQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQ-LTTIPKEIG 339

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFS 178
            L+SL++L L G  +L  +P  +GK++SL+EL +    +      I+ ++ L+  SL F+
Sbjct: 340 KLQSLQSLTLWGN-QLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFN 398

Query: 179 GCNEPPASAS-----WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AA 232
                P           LHL  N L          LP   G  +L KL   D G  +  A
Sbjct: 399 QLTAIPKEIEKLQNLQKLHLRNNQLT--------TLPKEIG--NLQKLQELDLGYNQLTA 448

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           +P +I  L +LK+LYLN N   TLP  I  L  L++L L + K L +LP+    LQ ++
Sbjct: 449 LPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNK-LTTLPKEIEKLQKLK 506



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 139 VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS-WHLHLPFNL 197
           +P  +GK+++L +LD+S   +      I  ++NL+ L  +           W+L     L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKL 186

Query: 198 -LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
            LG++       LP   G     K +L   G     +P +I  L  LKEL+L  N F TL
Sbjct: 187 SLGRNQLTT---LPEEIGKLQKLK-ELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTL 242

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           P  I  L NL+ L L D  R  +LP+   NLQ
Sbjct: 243 PKEIKKLQNLQWLNL-DSNRFTTLPKEIGNLQ 273



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 30/183 (16%)

Query: 112 LVRLPSSINGLKSLKTLNLS----------------------GCCKLENVPDTLGKVESL 149
           L  LP  I  L++L+ LNL+                      G  +L  +P+ +GK++ L
Sbjct: 147 LTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKL 206

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE---PPASASWHLHLPFNLLGKSSCPVA 206
           +EL + G         I  ++ L+ L+  G N     P       +L +  L   S    
Sbjct: 207 KELHLDGNQFTTLPKEIGKLQKLKELHL-GSNRFTTLPKEIKKLQNLQW--LNLDSNRFT 263

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            +   +  +  L KL L+   L    +P +I  L SL+ L L  N   TLP  I  L +L
Sbjct: 264 TLPKEIGNLQKLQKLSLAHNQL--TTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSL 321

Query: 267 EEL 269
           +EL
Sbjct: 322 QEL 324


>gi|215261577|gb|ACJ64857.1| disease resistance protein RPP1-like protein R3 [Arabidopsis
           thaliana]
          Length = 1193

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 161/345 (46%), Gaps = 72/345 (20%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L +L L + +S+ E+PSSIE LT L+ L L+GC +L  LP   ++ K L+ L+L
Sbjct: 683 LSTATNLEELKLRNCSSLVELPSSIEKLTSLQRLDLQGCSSLVELPSFGNATK-LKKLDL 741

Query: 60  SGCSKLKKFPQIVAS--MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
             CS L K P  + +  +++LS   ++ + + ++P+ IE    L  L L  C +L+ LP 
Sbjct: 742 GNCSSLVKLPPSINANNLQELS--LINCSRVVKLPA-IENATKLRELKLQNCSSLIELPL 798

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSL 175
           SI    +L  L++SGC  L  +P ++G + SLE  D+S  +  +  P+S    + NLR L
Sbjct: 799 SIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSS----IGNLRKL 854

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA--AI 233
                                LL    C     LP+   + SL  LDL+DC   ++   I
Sbjct: 855 --------------------TLLLMRGCSKLETLPTNINLISLRILDLTDCSRLKSFPEI 894

Query: 234 PSDIDNLH----SLKELYLN---------------------------------RNNFVTL 256
            + ID+L+    ++KE+ L+                                   +   +
Sbjct: 895 STHIDSLYLIGTAIKEVPLSIMSWSRLAVYKMSYFESLNEFPHALDIITELQLSKDIQEV 954

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           P  +  +  L  L L +C  L SLPQ+  +L ++ A+ C SL  L
Sbjct: 955 PPWVKRMSRLRVLRLNNCNNLVSLPQLSDSLDYIYADNCKSLERL 999



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 35/254 (13%)

Query: 63  SKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           SKL+K  +    + +L  + L     + E+P+ +     LE L L  C +LV LPSSI  
Sbjct: 651 SKLQKLWEGTKQLRNLKWMDLSYSIDLQELPN-LSTATNLEELKLRNCSSLVELPSSIEK 709

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSG 179
           L SL+ L+L GC  L  +P + G    L++LD+    + ++ P S      NL+ L    
Sbjct: 710 LTSLQRLDLQGCSSLVELP-SFGNATKLKKLDLGNCSSLVKLPPS--INANNLQELSLIN 766

Query: 180 CNEP---PA-------------SASWHLHLPFNL--------LGKSSCPVALMLPSLTG- 214
           C+     PA             + S  + LP ++        L  S C   + LPS  G 
Sbjct: 767 CSRVVKLPAIENATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSLVKLPSSIGD 826

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELED 273
           + SL   DLS+C      +PS I NL  L  L +   +   TLP +I+ L++L  L+L D
Sbjct: 827 MTSLEGFDLSNCS-NLVELPSSIGNLRKLTLLLMRGCSKLETLPTNIN-LISLRILDLTD 884

Query: 274 CKRLQSLPQIPPNL 287
           C RL+S P+I  ++
Sbjct: 885 CSRLKSFPEISTHI 898



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 52/168 (30%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +++ E+PSSI  L  L LL ++GC  L +LP  I+ L  LR L+L+ CS+LK FP+I   
Sbjct: 839  SNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNIN-LISLRILDLTDCSRLKSFPEISTH 897

Query: 75   MEDLSKLYLDGTSIAEVPSSI--------------------------------------- 95
            ++ L   YL GT+I EVP SI                                       
Sbjct: 898  IDSL---YLIGTAIKEVPLSIMSWSRLAVYKMSYFESLNEFPHALDIITELQLSKDIQEV 954

Query: 96   ----ELLPGLELLYLNECKNLVRLPSSINGLKSL-----KTLNLSGCC 134
                + +  L +L LN C NLV LP   + L  +     K+L    CC
Sbjct: 955  PPWVKRMSRLRVLRLNNCNNLVSLPQLSDSLDYIYADNCKSLERLDCC 1002



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 34/231 (14%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSL----------AIELLFGLVQLTLNGCKNL 694
           GNCS L +     P I     +  +++ELSL          AIE    L +L L  C +L
Sbjct: 742 GNCSSLVKLP---PSI-----NANNLQELSLINCSRVVKLPAIENATKLRELKLQNCSSL 793

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSG 753
             LP +I     L  L++SG S   + P        L    L   + +  LP+SI  L  
Sbjct: 794 IELPLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLRK 853

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL--------EVR 805
             L  ++ C  L++LP+ IN L SLR++  + CS+LK+  E    ++SL        EV 
Sbjct: 854 LTLLLMRGCSKLETLPTNIN-LISLRILDLTDCSRLKSFPEISTHIDSLYLIGTAIKEVP 912

Query: 806 LS--SWNRPKM--QNDFDCVEQ--SAVETVTKLAKAELLRDSDSWKKNVDK 850
           LS  SW+R  +   + F+ + +   A++ +T+L  ++ +++   W K + +
Sbjct: 913 LSIMSWSRLAVYKMSYFESLNEFPHALDIITELQLSKDIQEVPPWVKRMSR 963



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 26/179 (14%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   +  ++  + LS   D++EL   +     L +L L  C +L  LP +I  L  L
Sbjct: 655 KLWEGTKQLRNLKWMDLSYSIDLQELP-NLSTATNLEELKLRNCSSLVELPSSIEKLTSL 713

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS--------- 757
             L+L G S   E P   ++  +L ++ L   +++  LP SI   +   LS         
Sbjct: 714 QRLDLQGCSSLVELPSFGNA-TKLKKLDLGNCSSLVKLPPSINANNLQELSLINCSRVVK 772

Query: 758 -------------NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
                         L++C +L  LP +I    +L  +  SGCS L  +  ++G + SLE
Sbjct: 773 LPAIENATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLE 831


>gi|302125463|emb|CBI35550.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 140/271 (51%), Gaps = 27/271 (9%)

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
           E  I + + +L  L+ L L+RN  V++PA IS L NL+ L +  C++LQ +P++PP+++ 
Sbjct: 2   EGTIDNKLCHLELLEVLNLSRNYMVSIPADISRLSNLKVLLVRQCEKLQKIPKLPPSIKL 61

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINC-IDSLKLLRKN--GL---AISMLREYLELQAV 343
             A GC++L +L    ++   ++ +++  +  ++ +  N  GL    ++M  E L  +  
Sbjct: 62  FDACGCTALRSLPTPSRMISLQHRLVSTWLRPVEFMLWNCSGLYQDHVAMALETLHRELF 121

Query: 344 SDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTG 403
            + G+  SIV PG  IPKW  ++N G+S++ T P +  + N  +G A+C VF + +  T 
Sbjct: 122 PEIGY--SIVIPGRGIPKWPWHENMGASVSATLPPHWLD-NNFLGVALCAVFALEEGKTI 178

Query: 404 TYLFHSYPAHELECSMDGSGEGHYIYFRGKFGH-----VVSDHLWLLFLPRHGH-----N 453
                  P  E+ C+ +   EG Y      + H     V +DH+ +++ PR         
Sbjct: 179 -----QRPG-EIRCNFE-CREGPYFSHSITWTHSGDRVVETDHVCMMYQPRSQFVKSKST 231

Query: 454 WQFESNLIRLSFRSISDPTWKVKRCGFHPIY 484
           +      I+ SF S+S  + +VK+C    IY
Sbjct: 232 YASVFKHIKASF-SLSGASHEVKKCAIRLIY 261


>gi|342365826|gb|AEL30360.1| TIR-NBS-LRR-TIR type disease resistance protein [Arachis hypogaea]
          Length = 849

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 160/391 (40%), Gaps = 52/391 (13%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L ++ L  + I E+    ++L  LE L L  CK L   P  +S    L+ L L GC +L
Sbjct: 417 ELVEINLSKSQIAELWDGKKVLENLEHLYLSWCKQLKQTP-DLSGAPNLKKLNLRGCEEL 475

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
                 +A  + L +L L+     E       +  LE L L+ C +L RLP     +K L
Sbjct: 476 DYIHPSLAHHKRLVELNLEDCKRLETLGDKLEMSSLEKLDLDSCSSLRRLPEFGECMKKL 535

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
             LNL     +E +P TLG +  + EL++SG   I     S+     L+ L         
Sbjct: 536 SILNLRNT-GIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKKLVLRA----- 589

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                   LP    G  S  V                        E+ +  DI +L SL 
Sbjct: 590 --------LPQKTDGLESLTVRADYDDSDSSSR-----------EESTLSYDIAHLASLT 630

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGA 304
            L L+RN F+ +P SI  L  L  L+L  C  L+ LP++P +L+ + A GC SL   +  
Sbjct: 631 YLDLSRNRFLRVPISIHQLPRLTHLKLSFCDELEVLPELPSSLRELDAQGCYSLDKSY-- 688

Query: 305 LKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFM 364
                        +D +      G A S         A  D    L ++  G +IP WF 
Sbjct: 689 -------------VDDVISKTCCGFAES---------ASQDREDFLQMMITGEEIPAWFE 726

Query: 365 YQNEGSSITVTRPSYLYNVNKVVGFAICCVF 395
           +Q E   ++V+ P    +  ++V  A+C +F
Sbjct: 727 HQEEDEGVSVSFPLNCPST-EMVALALCFLF 756



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           MK LS L L  T I E+P ++  L G+  L L GC  ++ L +++     L+ L      
Sbjct: 532 MKKLSILNLRNTGIEELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKKL------ 585

Query: 64  KLKKFPQIVASMEDLS----KLYLDGTSIAEVPSSIELLPGLELLYLNECKN-LVRLPSS 118
            L+  PQ    +E L+        D +S  E   S ++     L YL+  +N  +R+P S
Sbjct: 586 VLRALPQKTDGLESLTVRADYDDSDSSSREESTLSYDIAHLASLTYLDLSRNRFLRVPIS 645

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
           I+ L  L  L LS C +LE +P+      SL ELD  G
Sbjct: 646 IHQLPRLTHLKLSFCDELEVLPEL---PSSLRELDAQG 680



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L L  CK LE L   +  +  L  L+L   S  R  PE      +L  ++L  T I 
Sbjct: 488 LVELNLEDCKRLETLGDKLE-MSSLEKLDLDSCSSLRRLPEFGECMKKLSILNLRNTGIE 546

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP ++  L+G    NL  C  +  L  ++     L+ +       L+ + +    +ESL
Sbjct: 547 ELPPTLGNLAGVSELNLSGCDKITGLLLSLGCFVGLKKLV------LRALPQKTDGLESL 600

Query: 803 EVR 805
            VR
Sbjct: 601 TVR 603


>gi|82542037|gb|ABB82026.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1070

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 156/369 (42%), Gaps = 71/369 (19%)

Query: 21  PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSK 80
           PS I L   L +L ++   NL  L      L  L+ + LS    L K P + +S   L K
Sbjct: 595 PSDITL-DNLAVLDMQ-YSNLKELWKGEKILNKLKIINLSHSQNLVKTPNLHSS--SLEK 650

Query: 81  LYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
           L L+G S         L+ G        C  L  LP SI  +KSLK++N+SGC +LE +P
Sbjct: 651 LILEGCS--------SLVKG--------CWRLKILPESIGNVKSLKSMNISGCSQLEKLP 694

Query: 141 DTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN---EPPASASW----HLHL 193
           + +  +ESL EL   G    +  SSI  +K +R L   G N     P+S  W        
Sbjct: 695 EHMDDMESLIELLADGIENEQFLSSIRQLKYIRRLSLRGYNFSQNSPSSTFWLSPSSTFW 754

Query: 194 PFNLLGKSSCPVALM---LPSLTGVCSLTK-LDLSDCGLGEAAIP-SDIDNLHSLKELYL 248
           P ++    S  V  +   LP       L K L+L D GL +      D   L SL+ L L
Sbjct: 755 PPSISSFISASVLCLKRSLPKAFIDWRLVKSLELPDAGLSDHTTNCVDFRGLSSLEVLDL 814

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
           +RN F +LP+ I+ L NL  L +  C  L S+P +P NL ++ A  C SL        +C
Sbjct: 815 SRNKFSSLPSGIAFLPNLGSLIVVGCNNLVSIPDLPSNLGYLGATYCKSL-----ERAMC 869

Query: 309 RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNE 368
                             NG  I          A   PG          ++PKW  Y+ E
Sbjct: 870 ------------------NGGHI------YHFHAERIPG----------EMPKWLSYRGE 895

Query: 369 GSSITVTRP 377
           G S++   P
Sbjct: 896 GCSLSFHIP 904



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 53/232 (22%)

Query: 617 MISVDSGCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIREL 673
           +I V  G ++ +   +  GR+ VR  SP+EPG  +R+W + D +  + Q    GTD+ E 
Sbjct: 479 LIKVLGGTITMHDLLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQ--QKGTDVVE- 535

Query: 674 SLAIELLFGLVQ-LTLNGCKNLERLP-RTISALKYLSTLNLSGLSK-----------FRE 720
            LA+++     + L+      ++RL    I+ +    +L L  LSK            + 
Sbjct: 536 GLALDVRASEAKSLSAGSFAKMKRLNLLQINGVHLTGSLKL--LSKVLMWICWHECPLKY 593

Query: 721 FP-EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNL-------------------- 759
           FP +IT   D L  + ++ + ++ L    ++L+   + NL                    
Sbjct: 594 FPSDIT--LDNLAVLDMQYSNLKELWKGEKILNKLKIINLSHSQNLVKTPNLHSSSLEKL 651

Query: 760 ---------KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                    K C  LK LP +I  ++SL+ M  SGCS+L+ + E +  +ESL
Sbjct: 652 ILEGCSSLVKGCWRLKILPESIGNVKSLKSMNISGCSQLEKLPEHMDDMESL 703


>gi|108738474|gb|ABG00770.1| disease resistance protein [Arabidopsis thaliana]
          Length = 559

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 143/300 (47%), Gaps = 21/300 (7%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           ++++P SI  L  L+ L + G   +  LP+  SSL  L       C  LK+ P  +  + 
Sbjct: 230 LSKIPDSINELKSLKKLFING-SAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLN 288

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
            L +L L  T I  +P  I  L  +  L L  CK L  LP SI  + +L +LNL G   +
Sbjct: 289 SLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEG-SNI 347

Query: 137 ENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF--SGCNEPPASAS----- 188
           E +P+  GK+E L EL +S    ++R   S   +K+L  LY   +  +E P S       
Sbjct: 348 EELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNL 407

Query: 189 ---WHLHLPF------NLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                L  P       N+ G S  P  + +P S + +  L +LD     +    IP D++
Sbjct: 408 MVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRIS-GKIPDDLE 466

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            L  L +L L  N F +LP+S+  L NL+EL L DC+ L+ LP +P  L+ +    C SL
Sbjct: 467 KLSCLMKLNLGNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSL 526



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 36/230 (15%)

Query: 648 SRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNL------------- 694
           S++ +  +E   + ++  +G+ + EL L    L  L   +   CK L             
Sbjct: 231 SKIPDSINELKSLKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSL 290

Query: 695 ----------ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
                     E LP  I AL ++  L L      +  P+     D L  ++LEG+ I  L
Sbjct: 291 LQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIEEL 350

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P     L   +   + +CK LK LP +   L+SL  +Y    + +  + E+ G + +L V
Sbjct: 351 PEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKE-TLVSELPESFGNLSNLMV 409

Query: 805 ---------RLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWK 845
                    R+S  N P    +   VE     + +KL K E L D+ SW+
Sbjct: 410 LEMLKKPLFRISESNVPGTSEEPRFVE--VPNSFSKLLKLEEL-DACSWR 456



 Score = 46.6 bits (109), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 54/249 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M  L  L L+G++I E+P                             L+ L  L +S
Sbjct: 331 IGDMDTLYSLNLEGSNIEELPEE------------------------FGKLEKLVELRMS 366

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL-------------- 106
            C  LK+ P+    ++ L +LY+  T ++E+P S   L  L +L +              
Sbjct: 367 NCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKPLFRISESNVP 426

Query: 107 --NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
             +E    V +P+S + L  L+ L+         +PD L K+  L +L++         S
Sbjct: 427 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGNNYFHSLPS 486

Query: 165 SIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSL 218
           S+  + NL+ L    C E    PP        LP  L  L  ++C     +  L+ +  L
Sbjct: 487 SLVKLSNLQELSLRDCRELKRLPP--------LPCKLEQLNLANCFSLESVSDLSELTIL 538

Query: 219 TKLDLSDCG 227
           T L+L++C 
Sbjct: 539 TDLNLTNCA 547



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L+ + L GC  L+  P + ++ E L KL  +  T + +VP S+  L  L  L    C  L
Sbjct: 55  LKVVILRGCHSLEAIPDL-SNHEALEKLVFEXCTLLVKVPKSVGNLRKLIHLDFRRCSKL 113

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
                 ++GLK L+ L LSGC  L  +P+ +G +
Sbjct: 114 SEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAM 147



 Score = 39.3 bits (90), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 32/61 (52%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           T + +VP S+  L  L  L  + C  LS   V +S LK L  L LSGCS L   P+ + +
Sbjct: 87  TLLVKVPKSVGNLRKLIHLDFRRCSKLSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGA 146

Query: 75  M 75
           M
Sbjct: 147 M 147


>gi|168016438|ref|XP_001760756.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688116|gb|EDQ74495.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 511

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 145/309 (46%), Gaps = 31/309 (10%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L+ L L D +S+T + + +  L+ L  L   GC +L+SL   +++L  L  L+ 
Sbjct: 9   LANLSSLTRLDLSDCSSLTSLSNDLTNLSSLTRLDFSGCSSLTSLTNDLTNLSSLTRLDF 68

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           SGCS L      + ++  L+ LY  G +S+  +P+    L  L  LY +    L+ LP+ 
Sbjct: 69  SGCSSLTSLTNDLTNLSSLTILYFCGCSSLTSLPNDFANLSSLTTLYFSSFSRLISLPND 128

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYF 177
           +  L SL TLN SGC  L ++P+    + SL  L  SG   +   T+ +  + +L  L+ 
Sbjct: 129 LKNLSSLTTLNFSGCSSLISLPNDSANLSSLTTLYFSGCLYLTSLTNDLINLASLIKLHL 188

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSD 236
           SGC                      C   L LP+ L  +  LT L+ S       ++P+D
Sbjct: 189 SGC----------------------CSRLLSLPNDLKNLSFLTTLNFSGSS-SLISLPND 225

Query: 237 IDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---FVRA 292
           + NL SL  LY +  +  +TL      L +L  L L  C  L SLP    NL     +  
Sbjct: 226 LANLSSLTTLYFSSCSRLITLRNDFVNLFSLRSLYLSGCLNLTSLPNDLANLSSSTTLYF 285

Query: 293 NGCSSLVTL 301
           + CS L++L
Sbjct: 286 SSCSRLISL 294



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 26/319 (8%)

Query: 1   MASMKDLSDLYLDG--TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLE 58
           + ++  L  L+L G  + +  +P+ ++ L+ L  L   G  +L SLP  +++L  L TL 
Sbjct: 177 LINLASLIKLHLSGCCSRLLSLPNDLKNLSFLTTLNFSGSSSLISLPNDLANLSSLTTLY 236

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
            S CS+L        ++  L  LYL G  ++  +P+ +  L     LY + C  L+ L +
Sbjct: 237 FSSCSRLITLRNDFVNLFSLRSLYLSGCLNLTSLPNDLANLSSSTTLYFSSCSRLISLTN 296

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSL 175
            +  L S  +L  SG  +L ++ + L  + S + L+ SG++  I  P + +  + +L +L
Sbjct: 297 DLANLSSWTSLYFSGFSRLISLTNDLKNLSSWKTLNFSGSSSLISLP-NDLANLSSLTTL 355

Query: 176 YFSGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLPS-LTGVCSLTKLDLSDC 226
           YFS C+           LP NL        LG   C     LP+ L  + SL +L+LS C
Sbjct: 356 YFSSCSRLTT------FLPKNLRNLSTLRRLGLKGCSSLACLPNKLPNLFSLIELNLSGC 409

Query: 227 GLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
                 +P+D+ NL  L+ L L+  ++  +LP  ++ L +L  L+L DC  L SLP+   
Sbjct: 410 S-SLIQLPNDLVNLSFLRTLNLHHCSSLTSLPNELANLSSLTTLDLSDCSSLISLPKELA 468

Query: 286 NL-QFVRAN--GCSSLVTL 301
           NL  F   N   C SL++L
Sbjct: 469 NLSSFTTLNLYHCLSLISL 487



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 9/223 (4%)

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+  +P+ +  L  L  L L++C +L  L + +  L SL  L+ SGC  L ++ + L  +
Sbjct: 1   SLISLPNDLANLSSLTRLDLSDCSSLTSLSNDLTNLSSLTRLDFSGCSSLTSLTNDLTNL 60

Query: 147 ESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL-PFNLLGKSSCP 204
            SL  LD SG +++   T+ +  + +L  LYF GC+   +  +   +L     L  SS  
Sbjct: 61  SSLTRLDFSGCSSLTSLTNDLTNLSSLTILYFCGCSSLTSLPNDFANLSSLTTLYFSSFS 120

Query: 205 VALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISG 262
             + LP+ L  + SLT L+ S C     ++P+D  NL SL  LY +   ++T L   +  
Sbjct: 121 RLISLPNDLKNLSSLTTLNFSGCS-SLISLPNDSANLSSLTTLYFSGCLYLTSLTNDLIN 179

Query: 263 LLNLEELELED-CKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           L +L +L L   C RL SLP    NL F+     +G SSL++L
Sbjct: 180 LASLIKLHLSGCCSRLLSLPNDLKNLSFLTTLNFSGSSSLISL 222



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 1/111 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           LF L++L L+GC +L +LP  +  L +L TLNL   S     P   ++   L  + L + 
Sbjct: 398 LFSLIELNLSGCSSLIQLPNDLVNLSFLRTLNLHHCSSLTSLPNELANLSSLTTLDLSDC 457

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           +++  LP  +  LS     NL  C +L SL + +  L SL M+  SGCS L
Sbjct: 458 SSLISLPKELANLSSFTTLNLYHCLSLISLSNELANLSSLIMLNLSGCSSL 508



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 680 LFGLVQLTLNGC-KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L  L++L L+GC   L  LP  +  L +L+TLN SG S     P   ++   L  ++   
Sbjct: 180 LASLIKLHLSGCCSRLLSLPNDLKNLSFLTTLNFSGSSSLISLPNDLANLSSLTTLYFSS 239

Query: 739 TA--IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            +  I      + L S   L  L  C NL SLP+ +  L S   +Y S CS+L ++T  L
Sbjct: 240 CSRLITLRNDFVNLFSLRSLY-LSGCLNLTSLPNDLANLSSSTTLYFSSCSRLISLTNDL 298

Query: 797 GKVES 801
             + S
Sbjct: 299 ANLSS 303



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 5/165 (3%)

Query: 643 EPGNCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           +  +CS L   +++  ++  +     S  + +  L+  +  L  L +L  +GC +L  L 
Sbjct: 19  DLSDCSSLTSLSNDLTNLSSLTRLDFSGCSSLTSLTNDLTNLSSLTRLDFSGCSSLTSLT 78

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
             ++ L  L+ L   G S     P   ++   L  ++    + +  LP  ++ LS     
Sbjct: 79  NDLTNLSSLTILYFCGCSSLTSLPNDFANLSSLTTLYFSSFSRLISLPNDLKNLSSLTTL 138

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           N   C +L SLP+    L SL  +Y SGC  L ++T  L  + SL
Sbjct: 139 NFSGCSSLISLPNDSANLSSLTTLYFSGCLYLTSLTNDLINLASL 183



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE--ITSSRDQLLEIHLEGTA 740
           L +L L GC +L  LP  +  L  L  LNLSG S   + P   +  S  + L +H   ++
Sbjct: 377 LRRLGLKGCSSLACLPNKLPNLFSLIELNLSGCSSLIQLPNDLVNLSFLRTLNLH-HCSS 435

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  LP  +  LS     +L DC +L SLP  +  L S   +    C  L +++  L  + 
Sbjct: 436 LTSLPNELANLSSLTTLDLSDCSSLISLPKELANLSSFTTLNLYHCLSLISLSNELANLS 495

Query: 801 SL 802
           SL
Sbjct: 496 SL 497


>gi|168035738|ref|XP_001770366.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678397|gb|EDQ64856.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 643

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 161/335 (48%), Gaps = 52/335 (15%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ LYL G +S+T  P  I  L+ L ++ L  C +L+SLP  I++L  L  L+L
Sbjct: 327 LINLSSLTKLYLSGCSSLTSFPHEITNLSSLRIVNLSDCSHLTSLPNEIANLSSLTKLDL 386

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-------------------------TSIAEVPSS 94
           + CS L   P  +A++  L+KL L G                         +S+  +P  
Sbjct: 387 TNCSILTSLPHEIANLSSLTKLDLRGCSSLTSLSHEITNLFSLIKLDLRGCSSLTSLPHE 446

Query: 95  IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           I     L    L  C +L+ LP  I  L SL +L+LSGC  L ++P  +  + S+ +LD+
Sbjct: 447 IAKFSSLTKFDLRTCSSLISLPHKIKNLSSLTSLHLSGCSSLTSLPYEIINLSSMTKLDL 506

Query: 155 SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
           SG +    TS    + NL SL                   FNL G S+  + ++L  +  
Sbjct: 507 SGYS--SLTSLPKELANLSSLNL-----------------FNLNGCSN--LIILLHEIKN 545

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELED 273
           + SLTKLDLS C L  A++  +I NL  LK L L+R +NF +L   IS L +L+ L L+ 
Sbjct: 546 LSSLTKLDLSGC-LSLASLLYEITNLSYLKWLKLSRYSNFTSLSHEISNLSSLKWLNLKR 604

Query: 274 CKRLQSLPQIPPN---LQFVRANGCSSLVTLFGAL 305
           C    SL     N   L+ +  + CSSL  L   L
Sbjct: 605 CSSFISLLHKIANLSSLKILDLSRCSSLKNLLKEL 639



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 155/322 (48%), Gaps = 39/322 (12%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +   +  LT L  L L GC +L SLP  IS+L  L  L+LS CS L   P  + +
Sbjct: 102 SSLTSLQHELANLTSLIELDLSGCSSLISLPQKISNLSSLIKLDLSRCSSLTSLPHELKN 161

Query: 75  MEDLSKLY-LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L K+Y ++ +S+  +P  +  L  L  L L  C +L  +P  +  L SL  L+LS C
Sbjct: 162 LSSLIKVYFMNWSSLTSLPKELANLSSLTKLNLTGCSSLTNMPHELANLSSLTILDLSEC 221

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL-------YFSGCNEP--- 183
            +L ++P  +  + SL  LD++  +    T+  + ++NL SL       + S  N P   
Sbjct: 222 LRLTSLPYEITNLSSLIILDLNNCS--SLTNLSYEIENLSSLTKVYLVNWSSLTNLPHEL 279

Query: 184 -------------PASASWHLHLPFNL-------LGKSSCPVALMLPSLTGVCSLTKLDL 223
                         +S    LH   NL       L + S  ++L    L  + SLTKL L
Sbjct: 280 TNLSSLTILSLSRCSSLRSLLHEIANLSSLTEFDLNECSSLISLS-HELINLSSLTKLYL 338

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           S C     + P +I NL SL+ + L+  ++  +LP  I+ L +L +L+L +C  L SLP 
Sbjct: 339 SGCS-SLTSFPHEITNLSSLRIVNLSDCSHLTSLPNEIANLSSLTKLDLTNCSILTSLPH 397

Query: 283 IPPNLQFVRA---NGCSSLVTL 301
              NL  +      GCSSL +L
Sbjct: 398 EIANLSSLTKLDLRGCSSLTSL 419



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 159/364 (43%), Gaps = 60/364 (16%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +A++  L+ L L G +S+T +P  +  L+ L +L L  C  L+SLP  I++L  L  L+L
Sbjct: 183 LANLSSLTKLNLTGCSSLTNMPHELANLSSLTILDLSECLRLTSLPYEITNLSSLIILDL 242

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-------------------------------- 87
           + CS L      + ++  L+K+YL   S                                
Sbjct: 243 NNCSSLTNLSYEIENLSSLTKVYLVNWSSLTNLPHELTNLSSLTILSLSRCSSLRSLLHE 302

Query: 88  IAEVPSSIEL-----------------LPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
           IA + S  E                  L  L  LYL+ C +L   P  I  L SL+ +NL
Sbjct: 303 IANLSSLTEFDLNECSSLISLSHELINLSSLTKLYLSGCSSLTSFPHEITNLSSLRIVNL 362

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPT-SSIFLMKNLRSLYFSGCNEPPASASW 189
           S C  L ++P+ +  + SL +LD++  +I       I  + +L  L   GC+    S S 
Sbjct: 363 SDCSHLTSLPNEIANLSSLTKLDLTNCSILTSLPHEIANLSSLTKLDLRGCSSL-TSLSH 421

Query: 190 HLHLPFNL--LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
            +   F+L  L    C     LP  +    SLTK DL  C     ++P  I NL SL  L
Sbjct: 422 EITNLFSLIKLDLRGCSSLTSLPHEIAKFSSLTKFDLRTCS-SLISLPHKIKNLSSLTSL 480

Query: 247 YLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL---QFVRANGCSSLVTLF 302
           +L+  ++  +LP  I  L ++ +L+L     L SLP+   NL        NGCS+L+ L 
Sbjct: 481 HLSGCSSLTSLPYEIINLSSMTKLDLSGYSSLTSLPKELANLSSLNLFNLNGCSNLIILL 540

Query: 303 GALK 306
             +K
Sbjct: 541 HEIK 544



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 20/256 (7%)

Query: 81  LYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
           L LDG     +P +I+ L  L  L L    NL  +   +  L SL +L+LSGC  L ++ 
Sbjct: 1   LNLDGIEFKVLPKAIKNLKSLSNLSLQSNSNLKIISDKLTNLYSLTSLDLSGCTSLTSLV 60

Query: 141 DTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL-- 197
             L  + SL  L++SG +++R  +  +  + +L SL  S C    +S +   H   NL  
Sbjct: 61  HELANLSSLTSLNLSGCSSLRSLSKKLANLSSLTSLNLSKC----SSLTSLQHELANLTS 116

Query: 198 ---LGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY-LNRNN 252
              L  S C   + LP  ++ + SL KLDLS C     ++P ++ NL SL ++Y +N ++
Sbjct: 117 LIELDLSGCSSLISLPQKISNLSSLIKLDLSRCS-SLTSLPHELKNLSSLIKVYFMNWSS 175

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKY 312
             +LP  ++ L +L +L L  C  L ++P    NL  +      +++ L   L+L    Y
Sbjct: 176 LTSLPKELANLSSLTKLNLTGCSSLTNMPHELANLSSL------TILDLSECLRLTSLPY 229

Query: 313 TIINCIDSLKLLRKNG 328
            I N + SL +L  N 
Sbjct: 230 EITN-LSSLIILDLNN 244



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 6/169 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L     E  ++  +    LS  + +  L   I  L  L++L L+ C +L  LP  + 
Sbjct: 101 CSSLTSLQHELANLTSLIELDLSGCSSLISLPQKISNLSSLIKLDLSRCSSLTSLPHELK 160

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L  +     S     P+  ++   L +++L G +++  +P  +  LS   + +L +
Sbjct: 161 NLSSLIKVYFMNWSSLTSLPKELANLSSLTKLNLTGCSSLTNMPHELANLSSLTILDLSE 220

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSW 809
           C  L SLP  I  L SL ++  + CS L N++  +  + SL +V L +W
Sbjct: 221 CLRLTSLPYEITNLSSLIILDLNNCSSLTNLSYEIENLSSLTKVYLVNW 269



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 5/151 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CS L     E  ++  +    LSD + +  L   I  L  L +L L  C  L  LP  I+
Sbjct: 341 CSSLTSFPHEITNLSSLRIVNLSDCSHLTSLPNEIANLSSLTKLDLTNCSILTSLPHEIA 400

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L+ L+L G S         ++   L+++ L G +++  LP  I   S     +L+ 
Sbjct: 401 NLSSLTKLDLRGCSSLTSLSHEITNLFSLIKLDLRGCSSLTSLPHEIAKFSSLTKFDLRT 460

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           C +L SLP  I  L SL  ++ SGCS L ++
Sbjct: 461 CSSLISLPHKIKNLSSLTSLHLSGCSSLTSL 491



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 5/149 (3%)

Query: 646 NCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NCS L     E  ++  +    L   + +  LS  I  LF L++L L GC +L  LP  I
Sbjct: 388 NCSILTSLPHEIANLSSLTKLDLRGCSSLTSLSHEITNLFSLIKLDLRGCSSLTSLPHEI 447

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLK 760
           +    L+  +L   S     P    +   L  +HL G +++  LP  I  LS     +L 
Sbjct: 448 AKFSSLTKFDLRTCSSLISLPHKIKNLSSLTSLHLSGCSSLTSLPYEIINLSSMTKLDLS 507

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
              +L SLP  +  L SL +   +GCS L
Sbjct: 508 GYSSLTSLPKELANLSSLNLFNLNGCSNL 536


>gi|297791233|ref|XP_002863501.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309336|gb|EFH39760.1| hypothetical protein ARALYDRAFT_916966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1064

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 5/137 (3%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  + L+G TS+ +V SSI  L  L  L LK C  L +LPV I  L+ L  L LSGCS 
Sbjct: 451 NLEHIDLEGCTSLVKVSSSIHHLDKLVFLNLKDCSRLRTLPVMIH-LESLEVLNLSGCSD 509

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LK   +I     +L +LYL GT+I E+PSSIE L  L  L L+ C  L +LP  ++ LK+
Sbjct: 510 LK---EIQDFSPNLKELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGMSNLKA 566

Query: 125 LKTLNLSGCCKLENVPD 141
           + TL LSGC  L+++P+
Sbjct: 567 MVTLKLSGCSNLKSLPN 583



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 239/584 (40%), Gaps = 110/584 (18%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            +L +LYL GT+I E+PSSIE LT L  L L  C  L  LP  +S+LK + TL+LSGCS L
Sbjct: 519  NLKELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGMSNLKAMVTLKLSGCSNL 578

Query: 66   KKFPQIVASMEDLSKLYLDGTS------IAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            K  P       +L  +YL GT         EVP S+     +    L+ C+ L +L    
Sbjct: 579  KSLP-------NLDAIYLRGTQHLNTEITMEVPKSLVHHSSIHQSRLDHCETLDKL---- 627

Query: 120  NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
                               +PD   K  ++++      ++ R  + I       +  +S 
Sbjct: 628  -------------------IPDLCLKNAAIQK--SLAASVYRQIAGI----RQENWQWST 662

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                P S        F+ L  +S   AL+   L+  C L  L    CGL    I      
Sbjct: 663  IKLQPLSI-------FHFL--ASRLYALVSLCLSNAC-LVDLPKEICGLPSVNI------ 706

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
                  L L  N F  +P SI  L  L  L L  CK L+SLP++P +L  +  +GC S+ 
Sbjct: 707  ------LDLGGNGFSKIPESIKLLPKLHSLRLRHCKNLKSLPELPQSLVLLNVHGCVSMK 760

Query: 300  TLFGALKLCRSKYTIINCID-SLKLLRKN-----GLAISMLRE---------YLELQAVS 344
            ++  + +  R + T  NC + S +++R+      G+  +M RE            + A +
Sbjct: 761  SVPWSFE--RLQCTFSNCFNLSPEVIRRFLAKALGIVKNMNREKHQKLITVTAFSICAPA 818

Query: 345  DPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV--FQVPKHST 402
              G K S     S+  K  M QN GS + +   S L      +GFA+  V  F+   ++ 
Sbjct: 819  SVGLKSSTDVLASEGLKSSM-QN-GSFVVIHLTSSLRKT--FLGFAMSVVVSFRDNYYNA 874

Query: 403  GTYLFHSYPAHELECSMDGSGEGHYIYFRGK-FGHVVSDHLWLLF------LPRHGHN-W 454
              +        +++  +    E  + ++  K    +  DH+++ +        R G+N +
Sbjct: 875  AGFSIRCTCIRKMKNGLSHRLERVFQFWAPKEASKIKKDHIFVFYDTIIPSYAREGNNVY 934

Query: 455  QFESNLIRLSFRSISDP------TWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLNE 508
                 L+   F  +++       + +VK CG + +    V    +T+    RF+  N   
Sbjct: 935  NIFDELVGFEFYPVNNQNEVLADSCEVKNCGVYVVTDASV----DTSLVKKRFSPTNRER 990

Query: 509  VHHDFVGSNMEVAQASGSGS-----SQWKWLKPVEVAVVMIMMR 547
            +    + S M+    S          + ++ + VE A++ I  R
Sbjct: 991  IGKRPLASAMDPRGFSSYREPLPRFKRGRYRRSVETAILKIRKR 1034



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 73/125 (58%), Gaps = 4/125 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + ++S +I  L  LV L L  C  L  LP  I  L+ L  LNLSG S  +E  + + +
Sbjct: 461 TSLVKVSSSIHHLDKLVFLNLKDCSRLRTLPVMIH-LESLEVLNLSGCSDLKEIQDFSPN 519

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L E++L GTAIR LP+SIE L+  +  +L +C  L+ LP  ++ L+++  +  SGCS
Sbjct: 520 ---LKELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGMSNLKAMVTLKLSGCS 576

Query: 788 KLKNV 792
            LK++
Sbjct: 577 NLKSL 581



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 8/143 (5%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLP 99
           L SLP    +L+ L+ + LS   +L K P++  ++ +L  + L+G TS+ +V SSI  L 
Sbjct: 418 LRSLPR--ENLEKLKKIILSHSRQLIKIPRLSKAL-NLEHIDLEGCTSLVKVSSSIHHLD 474

Query: 100 GLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            L  L L +C  L  LP  I+ L+SL+ LNLSGC  L+ + D      +L+EL ++GTAI
Sbjct: 475 KLVFLNLKDCSRLRTLPVMIH-LESLEVLNLSGCSDLKEIQDF---SPNLKELYLAGTAI 530

Query: 160 RRPTSSIFLMKNLRSLYFSGCNE 182
           R   SSI  +  L +L    CN+
Sbjct: 531 RELPSSIEKLTRLVTLDLDNCNQ 553



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 7/93 (7%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS L E  D  P++ ++   GT IREL  +IE L  LV L L+ C  L++LP+ +S LK 
Sbjct: 507 CSDLKEIQDFSPNLKELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGMSNLKA 566

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           + TL LSG S  +  P + +       I+L GT
Sbjct: 567 MVTLKLSGCSNLKSLPNLDA-------IYLRGT 592



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 40/188 (21%)

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
           L+ LK + LS   +L  +P  L K  +LE +D+ G T++ + +SSI    +L  L F   
Sbjct: 426 LEKLKKIILSHSRQLIKIP-RLSKALNLEHIDLEGCTSLVKVSSSI---HHLDKLVF--- 478

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                            L    C     LP +  + SL  L+LS C        SD+  +
Sbjct: 479 -----------------LNLKDCSRLRTLPVMIHLESLEVLNLSGC--------SDLKEI 513

Query: 241 H----SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV---RAN 293
                +LKELYL       LP+SI  L  L  L+L++C +LQ LPQ   NL+ +   + +
Sbjct: 514 QDFSPNLKELYLAGTAIRELPSSIEKLTRLVTLDLDNCNQLQKLPQGMSNLKAMVTLKLS 573

Query: 294 GCSSLVTL 301
           GCS+L +L
Sbjct: 574 GCSNLKSL 581


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 149/309 (48%), Gaps = 37/309 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++ +L+ L L    IT++P +I  L+ L +L     K ++ +P  I++L  L  L LS
Sbjct: 122 IANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNK-ITQIPEAIANLTNLTRLNLS 180

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK---------- 110
             +++ + P+++A + +L+ LYL G  I E+P +I  L  L LL L++ K          
Sbjct: 181 -SNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQ 239

Query: 111 ------------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
                        + ++P +I  L +LK L LS   ++  +P+ L  + +L +L +S   
Sbjct: 240 STNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSD-NQITEIPEALANLTNLMQLHLSSNQ 298

Query: 159 IRRPTSSIFLMKNLRSLYFSG--CNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGV 215
           I     ++  + NL  LY SG    E P + +   +LP    L   S  +  +  +L  +
Sbjct: 299 ITEIPEALANLTNLTQLYLSGNQITEIPEALA---NLPNLTRLYLYSNQITEIPEALANL 355

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +L +L L    + E  IP  + NL +L +L L  N    +P +++ L NL  L+L    
Sbjct: 356 TNLIQLVLFSNQIAE--IPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDL---- 409

Query: 276 RLQSLPQIP 284
           R   + QIP
Sbjct: 410 RFNQITQIP 418



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 154/312 (49%), Gaps = 26/312 (8%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L+ L L    IT++P +I  LT L+LL L   + ++ +P  +++L  L  L LS  +++
Sbjct: 242 NLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQ-ITEIPEALANLTNLMQLHLS-SNQI 299

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
            + P+ +A++ +L++LYL G  I E+P ++  LP L  LYL     +  +P ++  L +L
Sbjct: 300 TEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLY-SNQITEIPEALANLTNL 358

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFSGCNEP 183
             L L    ++  +P+TL  + +L +L +    I     ++  + NL    L F+   + 
Sbjct: 359 IQLVLF-SNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQI 417

Query: 184 PASAS-----WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           P   +       LHL       SS  +  +  +L  + +LT+L  S   + +  IP  I 
Sbjct: 418 PKVIANLTNLTELHL-------SSNQITQIPEALANLTNLTQLYFSSNQITQ--IPGAIA 468

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            L +L +L L+ N    +P +I  L  LE+L+L    R   LP I P +    ++   S+
Sbjct: 469 KLTNLTQLDLSGNQITEIPEAIESLSKLEKLDL----RGNPLP-ISPEI-LGSSDDVGSV 522

Query: 299 VTLFGALKLCRS 310
             +F  L+L RS
Sbjct: 523 EDIFNYLQLLRS 534



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 29/299 (9%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCK------------------NLSSLPVTISS 50
           +L L G  +TE+P  I  L  LE L L G K                  NL +LP+ +  
Sbjct: 20  ELDLSGQELTELPVEIGKLQQLESLIL-GKKVEGYERVGDHFLEKVSGNNLKTLPLELLG 78

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
           L  LR L++SG + L+  P +V  +  L +L L    + E+P +I  L  L  L L+   
Sbjct: 79  LPNLRKLDISG-NPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILS-YN 136

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
            + ++P +I  L +L  L  S   K+  +P+ +  + +L  L++S   I +    I  + 
Sbjct: 137 QITQIPEAIAKLSNLTVLIFSD-NKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLT 195

Query: 171 NLRSLYFSG--CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
           NL  LY SG    E P + +   +L   LL  S   +  +  ++T   +LT LDLS   +
Sbjct: 196 NLTLLYLSGNQITEIPEAIAQLTNL--TLLDLSDNKITEIPEAITQSTNLTVLDLSSNQI 253

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
               IP  I  L +LK LYL+ N    +P +++ L NL +L L    ++  +P+   NL
Sbjct: 254 --TKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHL-SSNQITEIPEALANL 309



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 4/144 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++ +L  L L    I E+P ++  LT L  L L+    ++ +P  I++L  L  L LS
Sbjct: 375 LANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLR-FNQITQIPKVIANLTNLTELHLS 433

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++ + P+ +A++ +L++LY     I ++P +I  L  L  L L+    +  +P +I 
Sbjct: 434 -SNQITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLS-GNQITEIPEAIE 491

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG 144
            L  L+ L+L G   L   P+ LG
Sbjct: 492 SLSKLEKLDLRG-NPLPISPEILG 514



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNE-----------------CKNLVRL 115
           A  E   +L L G  + E+P  I  L  LE L L +                   NL  L
Sbjct: 13  AVAEGWRELDLSGQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFLEKVSGNNLKTL 72

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           P  + GL +L+ L++SG   LE++PD + ++  LEEL +    +     +I  + NL  L
Sbjct: 73  PLELLGLPNLRKLDISGN-PLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQL 131

Query: 176 YFS--GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
             S     + P + +   +L   +L  S   +  +  ++  + +LT+L+LS   + +  I
Sbjct: 132 ILSYNQITQIPEAIAKLSNL--TVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQ--I 187

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           P  I  L +L  LYL+ N    +P +I+ L NL  L+L D K
Sbjct: 188 PEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNK 229



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 25/193 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++ +L+ LY     IT++P +I  LT L  L L G + ++ +P  I SL  L  L+L 
Sbjct: 444 LANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQ-ITEIPEAIESLSKLEKLDLR 502

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G + L   P+I+ S +D+        S+ ++ + ++LL   E+  LNE K L+    S+ 
Sbjct: 503 G-NPLPISPEILGSSDDVG-------SVEDIFNYLQLLRSGEVRPLNEAKLLLIGQGSVG 554

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG-KVES-----------LEELDVSGTAIRRPTSSIFL 168
               +K L  +     E  P T G  VE+           L   D  G  I   T   FL
Sbjct: 555 KTSLIKRLIRNEYD--EKQPQTDGLNVETWNVQVNSKDIRLNVWDFGGQEIYHATHQFFL 612

Query: 169 MKNLRSLYFSGCN 181
            K  RSLY   CN
Sbjct: 613 TK--RSLYLLVCN 623



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 86/173 (49%), Gaps = 17/173 (9%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSL----------AIELLFGLVQLTLNGCKNLE 695
           N +RL+  +++  +I + L++ T++ +L L           +  L  L+QL L     + 
Sbjct: 334 NLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVL-FSNQIA 392

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
            +P T++ L  L+ L+L   ++  + P++ ++   L E+HL    I  +P ++  L+   
Sbjct: 393 EIPETLAKLTNLTRLDLR-FNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTN-- 449

Query: 756 LSNLKDCKN-LKSLPSTINGLRSLRMMYPSG--CSKLKNVTETLGKVESLEVR 805
           L+ L    N +  +P  I  L +L  +  SG   +++    E+L K+E L++R
Sbjct: 450 LTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLR 502


>gi|167999638|ref|XP_001752524.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696424|gb|EDQ82763.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 539

 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 158/315 (50%), Gaps = 15/315 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S+K L+   +D  S+  +P SI+ L  LE L +KGC +L SLP  + +L  L TL++S
Sbjct: 25  LKSLKKLN--LIDCESLRILPMSIKSLNSLENLNMKGCYSLISLPNELGNLTSLTTLDIS 82

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C  L   P  + ++  L+ L +   +S+  +P+ +  L  L  LY+N+C +L  LP+ +
Sbjct: 83  YCLSLTSLPNELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTALYVNDCSSLTSLPNDL 142

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY--- 176
             L SL TL+LS C +L ++P+ LG +++L  LD+S    +R TS    + NL SL    
Sbjct: 143 GNLTSLITLDLSDCKRLTSLPNELGNLKALTTLDLSD--CKRLTSLPNELDNLTSLTTLD 200

Query: 177 FSGCNEPPASAS-WHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIP 234
            S C+      +   +      L    C   + LP+  G + SLT LD+S C     ++P
Sbjct: 201 ISDCSSLTLLPNKLGILTSLTTLNMRRCRSLISLPNEFGNLTSLTILDISYCS-SSTSLP 259

Query: 235 SDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFV 290
           +++ NL SL  L ++   + + LP  I     L  L +  C  L  LP    N   L  +
Sbjct: 260 NELGNLISLTTLNISYYPSLILLPNDIGNFTTLTTLNISYCSSLTLLPNELGNLTSLTIL 319

Query: 291 RANGCSSLVTLFGAL 305
                SSL++L   L
Sbjct: 320 DTTNFSSLISLVNKL 334



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 124/267 (46%), Gaps = 54/267 (20%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP 92
           L L+GC NL  LP TI  LK L+ L L  C  L+  P  + S+  L  L + G       
Sbjct: 7   LDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKG------- 59

Query: 93  SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
                           C +L+ LP+ +  L SL TL++S C  L ++P+ LG + SL  L
Sbjct: 60  ----------------CYSLISLPNELGNLTSLTTLDISYCLSLTSLPNELGNLTSLTTL 103

Query: 153 DVSGTAIRRPTSSIFLMKN-------LRSLYFSGCNEPPASASWHLHLPFNL-------- 197
           D+S        SS+ L+ N       L +LY + C       S    LP +L        
Sbjct: 104 DISY------CSSLTLLPNELGNLTSLTALYVNDC-------SSLTSLPNDLGNLTSLIT 150

Query: 198 LGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT- 255
           L  S C     LP+ L  + +LT LDLSDC     ++P+++DNL SL  L ++  + +T 
Sbjct: 151 LDLSDCKRLTSLPNELGNLKALTTLDLSDCK-RLTSLPNELDNLTSLTTLDISDCSSLTL 209

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQ 282
           LP  +  L +L  L +  C+ L SLP 
Sbjct: 210 LPNKLGILTSLTTLNMRRCRSLISLPN 236



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 160/351 (45%), Gaps = 65/351 (18%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ LY+ D +S+T +P+ +  LT L  L L  CK L+SLP  + +LK L TL+L
Sbjct: 118 LGNLTSLTALYVNDCSSLTSLPNDLGNLTSLITLDLSDCKRLTSLPNELGNLKALTTLDL 177

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C +L   P  + ++  L+ L + D +S+  +P+ + +L  L  L +  C++L+ LP+ 
Sbjct: 178 SDCKRLTSLPNELDNLTSLTTLDISDCSSLTLLPNKLGILTSLTTLNMRRCRSLISLPNE 237

Query: 119 INGLKSLK------------------------------------------------TLNL 130
              L SL                                                 TLN+
Sbjct: 238 FGNLTSLTILDISYCSSSTSLPNELGNLISLTTLNISYYPSLILLPNDIGNFTTLTTLNI 297

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--SGCNEPPASAS 188
           S C  L  +P+ LG + SL  LD +  +     S I L+  L +L F  + C    +S +
Sbjct: 298 SYCSSLTLLPNELGNLTSLTILDTTNFS-----SLISLVNKLDNLAFLTTLCITNWSSIT 352

Query: 189 WHLHLPFNL-----LGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
              +   NL     L  ++C     LP+ L  + SLT L +S+C      +P+++ NL S
Sbjct: 353 SLSNELGNLTSLTTLYITNCSSLTSLPNELGNLTSLTTLYISNCS-NLTLLPNELGNLTS 411

Query: 243 LKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           L  L + N ++ ++LP  +  L +L  L + DC  L SLP    NL  + +
Sbjct: 412 LTTLDISNCSSLISLPNELDNLTSLTALYIIDCSSLTSLPNELDNLTSLTS 462



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 120/248 (48%), Gaps = 33/248 (13%)

Query: 75  MEDLSKLYLDGTSIAE-VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           M  L +L L+G S  E +P++I+ L  L+ L L +C++L  LP SI  L SL+ LN+ GC
Sbjct: 1   MATLLELDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKGC 60

Query: 134 CKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             L ++P+ LG + SL  LD+S   +    P      + NL SL                
Sbjct: 61  YSLISLPNELGNLTSLTTLDISYCLSLTSLPNE----LGNLTSLTT-------------- 102

Query: 192 HLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                 L  S C    +LP+ L  + SLT L ++DC     ++P+D+ NL SL  L L+ 
Sbjct: 103 ------LDISYCSSLTLLPNELGNLTSLTALYVNDCS-SLTSLPNDLGNLTSLITLDLSD 155

Query: 251 -NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALK 306
                +LP  +  L  L  L+L DCKRL SLP    NL  +     + CSSL  L   L 
Sbjct: 156 CKRLTSLPNELGNLKALTTLDLSDCKRLTSLPNELDNLTSLTTLDISDCSSLTLLPNKLG 215

Query: 307 LCRSKYTI 314
           +  S  T+
Sbjct: 216 ILTSLTTL 223



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 2/157 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ LY+   +S+T +P+ +  LT L  L +  C NL+ LP  + +L  L TL++
Sbjct: 358 LGNLTSLTTLYITNCSSLTSLPNELGNLTSLTTLYISNCSNLTLLPNELGNLTSLTTLDI 417

Query: 60  SGCSKLKKFPQIVASMEDLSKLY-LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S CS L   P  + ++  L+ LY +D +S+  +P+ ++ L  L   Y+ +  NL+ L + 
Sbjct: 418 SNCSSLISLPNELDNLTSLTALYIIDCSSLTSLPNELDNLTSLTSFYICDYSNLILLSNE 477

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
           ++   SL  L++S C     +P  LG + SL  LD+S
Sbjct: 478 LSNFTSLTILDISYCSSFTLLPKKLGNLISLTTLDIS 514



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 114/270 (42%), Gaps = 50/270 (18%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P+ I   T L  L +  C +L+ LP  + +L  L  L+ +  S L      + ++
Sbjct: 278 SLILLPNDIGNFTTLTTLNISYCSSLTLLPNELGNLTSLTILDTTNFSSLISLVNKLDNL 337

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+ L +   +SI  + + +  L  L  LY+  C +L  LP+ +  L SL TL +S C 
Sbjct: 338 AFLTTLCITNWSSITSLSNELGNLTSLTTLYITNCSSLTSLPNELGNLTSLTTLYISNCS 397

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L  +P+ LG + SL  LD+S                                       
Sbjct: 398 NLTLLPNELGNLTSLTTLDISN-------------------------------------- 419

Query: 195 FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNN 252
                   C   + LP+ L  + SLT L + DC     ++P+++DNL SL   Y+ + +N
Sbjct: 420 --------CSSLISLPNELDNLTSLTALYIIDCS-SLTSLPNELDNLTSLTSFYICDYSN 470

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            + L   +S   +L  L++  C     LP+
Sbjct: 471 LILLSNELSNFTSLTILDISYCSSFTLLPK 500



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AI 741
           L++L L GC NLE LP TI  LK L  LNL      R  P    S + L  ++++G  ++
Sbjct: 4   LLELDLEGCSNLEMLPNTIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKGCYSL 63

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP  +  L+     ++  C +L SLP+ +  L SL  +  S CS L  +   LG + S
Sbjct: 64  ISLPNELGNLTSLTTLDISYCLSLTSLPNELGNLTSLTTLDISYCSSLTLLPNELGNLTS 123

Query: 802 L 802
           L
Sbjct: 124 L 124



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 16/178 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CS L    +E  ++  +    ++D + +  L   +  L  L+ 
Sbjct: 91  PNELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTALYVNDCSSLTSLPNDLGNLTSLIT 150

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGL 744
           L L+ CK L  LP  +  LK L+TL+LS   +    P    +   L  + + + +++  L
Sbjct: 151 LDLSDCKRLTSLPNELGNLKALTTLDLSDCKRLTSLPNELDNLTSLTTLDISDCSSLTLL 210

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P  + +L+     N++ C++L SLP+    L SL ++  S CS   ++   LG + SL
Sbjct: 211 PNKLGILTSLTTLNMRRCRSLISLPNEFGNLTSLTILDISYCSSSTSLPNELGNLISL 268



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  L ++ C +L  LP  +  L  L+TL++S  S     P    +   L  +++ + 
Sbjct: 73  LTSLTTLDISYCLSLTSLPNELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTALYVNDC 132

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+  I  +L DCK L SLP+ +  L++L  +  S C +L ++   L  
Sbjct: 133 SSLTSLPNDLGNLTSLITLDLSDCKRLTSLPNELGNLKALTTLDLSDCKRLTSLPNELDN 192

Query: 799 VESL 802
           + SL
Sbjct: 193 LTSL 196



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 3/159 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D   +R L ++I+ L  L  L + GC +L  LP  +  L  L+TL++S        P 
Sbjct: 33  LIDCESLRILPMSIKSLNSLENLNMKGCYSLISLPNELGNLTSLTTLDISYCLSLTSLPN 92

Query: 724 ITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              +   L  + +   +++  LP  +  L+      + DC +L SLP+ +  L SL  + 
Sbjct: 93  ELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTALYVNDCSSLTSLPNDLGNLTSLITLD 152

Query: 783 PSGCSKLKNVTETLGKVESL-EVRLSSWNR-PKMQNDFD 819
            S C +L ++   LG +++L  + LS   R   + N+ D
Sbjct: 153 LSDCKRLTSLPNELGNLKALTTLDLSDCKRLTSLPNELD 191



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 1/128 (0%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
            I+ L  L +L L  C++L  LP +I +L  L  LN+ G       P    +   L  + 
Sbjct: 21  TIKHLKSLKKLNLIDCESLRILPMSIKSLNSLENLNMKGCYSLISLPNELGNLTSLTTLD 80

Query: 736 LE-GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +    ++  LP  +  L+     ++  C +L  LP+ +  L SL  +Y + CS L ++  
Sbjct: 81  ISYCLSLTSLPNELGNLTSLTTLDISYCSSLTLLPNELGNLTSLTALYVNDCSSLTSLPN 140

Query: 795 TLGKVESL 802
            LG + SL
Sbjct: 141 DLGNLTSL 148


>gi|294461743|gb|ADE76430.1| unknown [Picea sitchensis]
          Length = 524

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 148/281 (52%), Gaps = 8/281 (2%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P S+  LT L+ + L  C++L  LP ++ +L  L++++L  C  L++ P+ ++++
Sbjct: 8   SLERLPESLGNLTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERLPESLSNL 67

Query: 76  EDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            +L  + L    S+  +P S+  L  L+ + L++C +L RLP S+  L +L+++ L  C 
Sbjct: 68  TNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCG 127

Query: 135 KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            LE +P++LG + +L+ +D+ G  ++ R   S+  + NL+S+    C           +L
Sbjct: 128 SLERLPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSMVLHSCESLERLPECLGNL 187

Query: 194 P-FNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                +    C     +P SL  + +L  + L  CG  E  +P  + NL +L+ + L   
Sbjct: 188 TNLQSMKLDYCESLERVPESLGNLTNLQSMVLHACGNLE-RLPESLGNLMNLQSMKLKSE 246

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
               LP S+  L NL+ + L +C RL+ LP+   NL  +++
Sbjct: 247 ---RLPESLGNLTNLQSMVLYECWRLERLPESLGNLMNLQS 284



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 160/314 (50%), Gaps = 18/314 (5%)

Query: 1   MASMKDLSDLYLD-GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++ +L  + LD   S+  VP S+  LT L+ + L  C NL  LP ++ +L  L++++L
Sbjct: 184 LGNLTNLQSMKLDYCESLERVPESLGNLTNLQSMVLHACGNLERLPESLGNLMNLQSMKL 243

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
               K ++ P+ + ++ +L  + L +   +  +P S+  L  L+ + L+ C++L RLP S
Sbjct: 244 ----KSERLPESLGNLTNLQSMVLYECWRLERLPESLGNLMNLQSMMLHWCESLERLPES 299

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYF 177
           +  L +L+++ L  C KLE++P++LG + +L+ + +     + R   S+  + NL+S+  
Sbjct: 300 LGNLMNLQSMVLHECSKLESLPESLGNLTNLQSMVLHECDHLERLPESLGNLTNLQSMEL 359

Query: 178 SGCNE----PPASASWHLHLPFNLLG-KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
             C      P +  +        LLG KS   +   L +L  + S+  L L         
Sbjct: 360 IYCKRLARLPKSLGNLTNLQSMQLLGLKSLKRLPKSLGNLMNLRSMQLLGLESL----ER 415

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP--PNLQFV 290
           +P  + NL +L+ + L+    +    SI  LL+LEEL + DC +L+S+P +     L+ +
Sbjct: 416 LPKSLGNLTNLQSMELSFLESLERLPSIKTLLSLEELRVLDCVKLKSIPDLAQLTKLRLL 475

Query: 291 RANGCSSLVTLFGA 304
              GC +L  L G 
Sbjct: 476 NVEGCHTLEELDGV 489



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRP 162
           + LN C++L RLP S+  L +L+++ L  C  LE +P++LG + +L+ + +    ++ R 
Sbjct: 1   MELNHCRSLERLPESLGNLTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERL 60

Query: 163 TSSIFLMKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSL 218
             S+  + NL+S+    C      P S     +L   +L K  C     LP SL  + +L
Sbjct: 61  PESLSNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHK--CGSLERLPESLGNLTNL 118

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLN-RNNFVTLPASISGLLNLEELELEDCKRL 277
             + L  CG  E  +P  + NL +L+ + L+   +   LP S+  L NL+ + L  C+ L
Sbjct: 119 QSMVLHKCGSLE-RLPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSMVLHSCESL 177

Query: 278 QSLPQI---PPNLQFVRANGCSSL 298
           + LP+      NLQ ++ + C SL
Sbjct: 178 ERLPECLGNLTNLQSMKLDYCESL 201



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 1/119 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           + LN C++LERLP ++  L  L ++ L         PE   +   L  + L+   ++  L
Sbjct: 1   MELNHCRSLERLPESLGNLTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERL 60

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           P S+  L+      L  C +L+ LP ++  L +L+ M    C  L+ + E+LG + +L+
Sbjct: 61  PESLSNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQ 119



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L  + L+ C +LERLP ++  L  L ++ L         PE   +   L  + L+G 
Sbjct: 91  LTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMDLDGL 150

Query: 739 TAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
            ++  LP S+    GN L+NL+      C++L+ LP  +  L +L+ M    C  L+ V 
Sbjct: 151 KSLERLPESL----GN-LTNLQSMVLHSCESLERLPECLGNLTNLQSMKLDYCESLERVP 205

Query: 794 ETLGKVESLE 803
           E+LG + +L+
Sbjct: 206 ESLGNLTNLQ 215



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 15/130 (11%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  + L+ C NLERLP ++  L  L ++ L    K    PE   +   L  + L E 
Sbjct: 211 LTNLQSMVLHACGNLERLPESLGNLMNLQSMKL----KSERLPESLGNLTNLQSMVLYEC 266

Query: 739 TAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
             +  LP S+    GN++ NL+      C++L+ LP ++  L +L+ M    CSKL+++ 
Sbjct: 267 WRLERLPESL----GNLM-NLQSMMLHWCESLERLPESLGNLMNLQSMVLHECSKLESLP 321

Query: 794 ETLGKVESLE 803
           E+LG + +L+
Sbjct: 322 ESLGNLTNLQ 331



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 13/131 (9%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL--LEIHLE 737
           L  L  + L+ C++LERLP ++  L  L ++ L         PE  S+   L  + +H  
Sbjct: 19  LTNLQSMKLDHCRSLERLPESLGNLTNLQSMKLDDCRSLERLPESLSNLTNLQSMVLHKC 78

Query: 738 GTAIRGLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           G+  R LP S+    GN L+NL+      C +L+ LP ++  L +L+ M    C  L+ +
Sbjct: 79  GSLER-LPESL----GN-LTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERL 132

Query: 793 TETLGKVESLE 803
            E+LG + +L+
Sbjct: 133 PESLGNLTNLQ 143



 Score = 42.7 bits (99), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 10/169 (5%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDG-TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           G+  RL E      ++  +  DG   +  L  ++  L  L  + L+ C++LERLP  +  
Sbjct: 127 GSLERLPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSMVLHSCESLERLPECLGN 186

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDC 762
           L  L ++ L         PE   +   L  + L     +  LP S+    GN++ NL+  
Sbjct: 187 LTNLQSMKLDYCESLERVPESLGNLTNLQSMVLHACGNLERLPESL----GNLM-NLQSM 241

Query: 763 KNLKS--LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
           K LKS  LP ++  L +L+ M    C +L+ + E+LG + +L+  +  W
Sbjct: 242 K-LKSERLPESLGNLTNLQSMVLYECWRLERLPESLGNLMNLQSMMLHW 289



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 3/142 (2%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D   +  L  ++  L  L  + L+ C +LERLP ++  L  L ++ L         PE
Sbjct: 51  LDDCRSLERLPESLSNLTNLQSMVLHKCGSLERLPESLGNLTNLQSMVLHKCGSLERLPE 110

Query: 724 ITSSRDQL--LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
              +   L  + +H  G+  R LP S+  L+     +L   K+L+ LP ++  L +L+ M
Sbjct: 111 SLGNLTNLQSMVLHKCGSLER-LPESLGNLTNLQSMDLDGLKSLERLPESLGNLTNLQSM 169

Query: 782 YPSGCSKLKNVTETLGKVESLE 803
               C  L+ + E LG + +L+
Sbjct: 170 VLHSCESLERLPECLGNLTNLQ 191



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 32/199 (16%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL + + +  L  ++  L  L  + L+ C +LERLP ++  L  L ++ L    +    P
Sbjct: 310 VLHECSKLESLPESLGNLTNLQSMVLHECDHLERLPESLGNLTNLQSMELIYCKRLARLP 369

Query: 723 EITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRS 777
           +   +   L  + L G  +++ LP S+    GN+++     L   ++L+ LP ++  L +
Sbjct: 370 KSLGNLTNLQSMQLLGLKSLKRLPKSL----GNLMNLRSMQLLGLESLERLPKSLGNLTN 425

Query: 778 LRMMYPSGCSKLKNV--TETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKA 835
           L+ M  S    L+ +   +TL  +E L V              DCV+  ++  + +L K 
Sbjct: 426 LQSMELSFLESLERLPSIKTLLSLEELRV-------------LDCVKLKSIPDLAQLTKL 472

Query: 836 ELLRDSDSWKKNVDKCMKL 854
            LL        NV+ C  L
Sbjct: 473 RLL--------NVEGCHTL 483


>gi|13517469|gb|AAK28806.1|AF310960_2 P2 rust resistance protein [Linum usitatissimum]
          Length = 1211

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 131/529 (24%), Positives = 224/529 (42%), Gaps = 84/529 (15%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ EVP  ++ LT L  L +  CKNL  LP  + S K L+ + + G   + + P+I +  
Sbjct: 727  SLVEVPFHVQYLTKLVTLDISFCKNLKRLPPKLDS-KLLKHVRMQGLG-ITRCPEIDS-- 782

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
             +L K  L  TS+ E+PS+I  +    +L L+  KN+ + P     LK            
Sbjct: 783  RELEKFDLCFTSLGELPSAIYNVKQNGVLRLH-GKNITKFPGITTILKYF---------- 831

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHLHL 193
                  TL +  S+ E+D++    +  TS   L+   ++L+ +G    E   ++ W++  
Sbjct: 832  ------TLSRT-SIREIDLADYHQQHQTSDGLLLPRFQNLWLTGNRQLEVLPNSIWNMIS 884

Query: 194  PFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                +G+S  P+   LP ++  + +LT L +  C     +IP+ I NL SL+ L L    
Sbjct: 885  EELYIGRS--PLIESLPEISEPMSTLTSLHVF-CCRSLTSIPTSISNLRSLRSLRLVETG 941

Query: 253  FVTLPASISGLLNLEELELEDCKRLQ------------------------SLPQIPPNLQ 288
              +LP+SI  L  L  + L DCK L+                        SLP++PPNL+
Sbjct: 942  IKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMYGCESIPSLPELPPNLK 1001

Query: 289  FVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH 348
             +    C SL     AL     K   +N I   +  + +    +       + A   P +
Sbjct: 1002 ELEVRDCKSL----QALPSNTCKLLYLNRIYFEECPQVDQTIPAEFMANFLVHASLSPSY 1057

Query: 349  KLSIVFPGSQIPKWFMYQN----EGSSITVTRPSYLYNVNK----VVGFAICCVFQVPKH 400
            +  +   GS++PKWF Y++    + S++ V  P  L N +     + G A  CV     +
Sbjct: 1058 ERQVRCSGSELPKWFSYRSMEDEDCSTVKVELP--LANDSPDHPMIKGIAFGCV-----N 1110

Query: 401  STGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFG--HVVSDHLWLLFLPRHGHNWQFES 458
            S+  Y  +S+      C +  +    ++  +   G     S+ +WL+F      N    S
Sbjct: 1111 SSDPY--YSWMRMGCRCEVGNTTVASWVSNKKVMGPEEKSSETVWLVF------NKNLSS 1162

Query: 459  NLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLN 507
                 S  S  D  W VK  GF   +     ++D+   +  +   C ++
Sbjct: 1163 T---GSMGSEEDEAWYVKYGGFDVSFNFYFLDYDDEIIKKVKIKRCGVS 1208



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 4/175 (2%)

Query: 7    LSDLYLDGTSITEV-PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
              +L+L G    EV P+SI  +   EL   +    + SLP     +  L +L +  C  L
Sbjct: 861  FQNLWLTGNRQLEVLPNSIWNMISEELYIGRS-PLIESLPEISEPMSTLTSLHVFCCRSL 919

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
               P  ++++  L  L L  T I  +PSSI  L  L  + L +CK+L  +P+SI+ L  L
Sbjct: 920  TSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKL 979

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             T ++ GC  + ++P+    ++ LE  D        P+++  L+  L  +YF  C
Sbjct: 980  GTFSMYGCESIPSLPELPPNLKELEVRDCKSLQA-LPSNTCKLLY-LNRIYFEEC 1032



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +++++ L  L L  T I  +PSSI  L  L  + L+ CK+L S+P +I  L  L T  + 
Sbjct: 926  ISNLRSLRSLRLVETGIKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMY 985

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC 109
            GC  +   P++  ++++L     D  S+  +PS+   L  L  +Y  EC
Sbjct: 986  GCESIPSLPELPPNLKELE--VRDCKSLQALPSNTCKLLYLNRIYFEEC 1032



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            +E LP     +  L++L++         P   S+   L  + L  T I+ LP+SI  L  
Sbjct: 895  IESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQ 954

Query: 754  NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
                 L+DCK+L+S+P++I+ L  L      GC  + ++ E    ++ LEVR
Sbjct: 955  LHSICLRDCKSLESIPNSIHKLSKLGTFSMYGCESIPSLPELPPNLKELEVR 1006



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 26/122 (21%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I+ L  +I  L  L  + L  CK+LE +P +I  L  L T ++ G       PE    
Sbjct: 940  TGIKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMYGCESIPSLPE---- 995

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                            LP +++ L       ++DCK+L++LPS    L  L  +Y   C 
Sbjct: 996  ----------------LPPNLKEL------EVRDCKSLQALPSNTCKLLYLNRIYFEECP 1033

Query: 788  KL 789
            ++
Sbjct: 1034 QV 1035


>gi|238478954|ref|NP_001154443.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196039|gb|AEE34160.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1004

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 168/375 (44%), Gaps = 69/375 (18%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           DG  I ++P  +E    L +L  +   N    P      + L  L +   SKL+   Q  
Sbjct: 535 DGNDIMDIPKRMEFPRRLRILKWEAYPN-KCFPPKFHP-EYLVELVMKN-SKLEYLWQGT 591

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             +++L ++ L G+S  +   ++     +E+L L++CK+LV +PSS + L+ L+ L L G
Sbjct: 592 QPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSDCKSLVEIPSSFSHLQRLEKLRLRG 651

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS------ 186
           C  LE +P  +  +E L +LD+ G +  R   +I +M     LYF   +E          
Sbjct: 652 CISLEVIPADMN-LEFLYDLDMRGCSRLR---NIPVMST--RLYFLNISETAVEDVSASI 705

Query: 187 ASWH--LHLPFNLLGKSSCPVALMLPSLTGVCSLTK----LDLSDCGLGEAAIPSDIDNL 240
            SWH   HL  N   K           L G+  L +    LDLS  G+    IP+ I + 
Sbjct: 706 TSWHHVTHLSINSSAK-----------LRGLTHLPRPVEFLDLSYSGI--ERIPNCIKDR 752

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
           + LK L            +ISG           C+RL SLP++P +L+F+ A+ C SL T
Sbjct: 753 YLLKSL------------TISG-----------CRRLTSLPELPASLKFLVADDCESLET 789

Query: 301 LFGALKLCRS-KYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           +F   K  +   + I    +  KL ++   AI           +  P    + + PG ++
Sbjct: 790 VFCPFKTSKCWPFNIFEFTNCFKLDQEARRAI-----------IQRPFFHGTTLLPGREV 838

Query: 360 PKWFMYQNEGSSITV 374
           P  F ++  G+++T+
Sbjct: 839 PAEFDHRGRGNTLTI 853


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 137/283 (48%), Gaps = 11/283 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  L+LD   +T VP+ I  LT L  L L GC  L+S+P  I  L  L  LEL 
Sbjct: 47  IGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYL-GCNQLTSVPAWIGQLTSLTHLEL- 104

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL-EL-LYLNECKNLVRLPSS 118
             ++L   P  +  +  L KL+L+G  +  VP+ I  L  L EL LY N+   L  +P+ 
Sbjct: 105 WSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQ---LTSVPAE 161

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  L SL  L L GC +L +VP  +G++ SL+EL + G  +    + I  +  L+ L   
Sbjct: 162 IGQLTSLTDLYL-GCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLK 220

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                   A         LL  +   +  +   +  + SL  L L    L   ++P++I 
Sbjct: 221 DNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQL--TSVPAEIG 278

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            L SL++LYL+ N   ++P  I  L +L  LELE   +L S+P
Sbjct: 279 QLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEG-NQLTSVP 320



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 141/327 (43%), Gaps = 53/327 (16%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  LYLD   +T VP  I  LT L  L L+G + L+S+P  I  L  L+ L L 
Sbjct: 277 IGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQ-LTSVPAEIWQLTSLKWLNL- 334

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +  L +L L G  +  VP+ +  L  L  L L+  + L  LP+ I 
Sbjct: 335 GYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNR-LTSLPAEIG 393

Query: 121 GLKSLKTLNLSG----------------------CCKLENVPDTLGKVESLEELDVSGTA 158
            L SL+ L LS                         +L +VP  +G++ SL  L +    
Sbjct: 394 QLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNR 453

Query: 159 IRRPTSSIFLMKNLRSLYFS--GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-V 215
           +    + I  + +L  LY +       PA       L  +LLG +       +P+  G +
Sbjct: 454 LTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLT---SVPAEIGQL 510

Query: 216 CSLTKLDLSDCGLGEAA---------------------IPSDIDNLHSLKELYLNRNNFV 254
            SLT LDL D  L                         +P++I  L SLK LYL+ N   
Sbjct: 511 TSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELT 570

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
           ++PA I  L +L+EL L D  +L SLP
Sbjct: 571 SVPAEIGQLTSLQELWLND-NQLTSLP 596



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 139/318 (43%), Gaps = 56/318 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L L G  +T VP+ +  L+ L  L+L   + L+SLP  I  L  LR L LS
Sbjct: 346 IGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNR-LTSLPAEIGQLTSLRELRLS 404

Query: 61  G----------------------CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
                                   ++L   P  +  +  L  L+L    +  VP+ I  L
Sbjct: 405 DNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQL 464

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             LE LYL E + L  LP+ I  L SL   +L G  +L +VP  +G++ SL  LD+    
Sbjct: 465 TSLEWLYLAENQ-LTSLPAEIGQLTSLVE-SLLGGNQLTSVPAEIGQLTSLTHLDLVDNQ 522

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCS 217
           +    + +  +  LR L  S                 N L         +LP+  G + S
Sbjct: 523 LTSVPAEVGRLTALRELNVS----------------RNALT--------LLPAEIGRLTS 558

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L  L L +  L   ++P++I  L SL+EL+LN N   +LPA I  L+ L  L L   +  
Sbjct: 559 LKGLYLDENEL--TSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQ-- 614

Query: 278 QSLPQIPPNLQFVRANGC 295
             L  +P  ++ ++A GC
Sbjct: 615 --LTSMPAAIRKLKAAGC 630



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 37/266 (13%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           ++P  +  L  L+ L+L     L   P  +  +  L  L+LD   +  VP+ I  L  L 
Sbjct: 19  AVPAEVGRLSALKVLDLRNY-HLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLT 77

Query: 103 LLYL--NECKN--------------------LVRLPSSINGLKSLKTLNLSGCCKLENVP 140
            LYL  N+  +                    L  +P+ I  L SL+ L+L G  +L +VP
Sbjct: 78  HLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEG-NQLTSVP 136

Query: 141 DTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP----FN 196
             +G++ +L EL + G  +    + I  + +L  LY  GCN+  +  +W   L       
Sbjct: 137 AEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYL-GCNQLTSVPAWIGQLTSLKELT 195

Query: 197 LLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
           L G     V    P+  G + +L  L L D  L   ++P++I  L +LK L LN N   +
Sbjct: 196 LYGNQLTSV----PAEIGQLAALQWLSLKDNKL--TSVPAEIGQLRALKLLRLNGNQLTS 249

Query: 256 LPASISGLLNLEELELEDCKRLQSLP 281
           +PA I  L +LE L L    +L S+P
Sbjct: 250 VPAEIGQLASLENL-LLGHNQLTSVP 274



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 106/239 (44%), Gaps = 14/239 (5%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           LEL         P  V  +  L  L L    +  VP+ I  L  L +L+L+  + L  +P
Sbjct: 9   LELEEFDLTGAVPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQ-LTSVP 67

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           + I  L SL  L L GC +L +VP  +G++ SL  L++    +    + I  + +L  L+
Sbjct: 68  AEIGQLTSLTHLYL-GCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLH 126

Query: 177 FSG--CNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
             G      PA     + L    L G     V   +  LT   SLT L L    L   ++
Sbjct: 127 LEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLT---SLTDLYLGCNQL--TSV 181

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           P+ I  L SLKEL L  N   ++PA I  L  L+ L L+D K    L  +P  +  +RA
Sbjct: 182 PAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNK----LTSVPAEIGQLRA 236



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           +G  +  +   I  L  L +LTL G + L  +P  I  L  L+ L L G ++    P   
Sbjct: 128 EGNQLTSVPAEIGQLVALTELTLYGNQ-LTSVPAEIGQLTSLTDLYL-GCNQLTSVPAWI 185

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
                L E+ L G  +  +PA I  L+     +LKD K L S+P+ I  LR+L+++  +G
Sbjct: 186 GQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNK-LTSVPAEIGQLRALKLLRLNG 244

Query: 786 CSKLKNVTETLGKVESLE 803
            ++L +V   +G++ SLE
Sbjct: 245 -NQLTSVPAEIGQLASLE 261


>gi|238478956|ref|NP_001154444.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196040|gb|AEE34161.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 988

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 168/375 (44%), Gaps = 69/375 (18%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           DG  I ++P  +E    L +L  +   N    P      + L  L +   SKL+   Q  
Sbjct: 535 DGNDIMDIPKRMEFPRRLRILKWEAYPN-KCFPPKFHP-EYLVELVMKN-SKLEYLWQGT 591

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             +++L ++ L G+S  +   ++     +E+L L++CK+LV +PSS + L+ L+ L L G
Sbjct: 592 QPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSDCKSLVEIPSSFSHLQRLEKLRLRG 651

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS------ 186
           C  LE +P  +  +E L +LD+ G +  R   +I +M     LYF   +E          
Sbjct: 652 CISLEVIPADMN-LEFLYDLDMRGCSRLR---NIPVMST--RLYFLNISETAVEDVSASI 705

Query: 187 ASWH--LHLPFNLLGKSSCPVALMLPSLTGVCSLTK----LDLSDCGLGEAAIPSDIDNL 240
            SWH   HL  N   K           L G+  L +    LDLS  G+    IP+ I + 
Sbjct: 706 TSWHHVTHLSINSSAK-----------LRGLTHLPRPVEFLDLSYSGI--ERIPNCIKDR 752

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
           + LK L            +ISG           C+RL SLP++P +L+F+ A+ C SL T
Sbjct: 753 YLLKSL------------TISG-----------CRRLTSLPELPASLKFLVADDCESLET 789

Query: 301 LFGALKLCRS-KYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           +F   K  +   + I    +  KL ++   AI           +  P    + + PG ++
Sbjct: 790 VFCPFKTSKCWPFNIFEFTNCFKLDQEARRAI-----------IQRPFFHGTTLLPGREV 838

Query: 360 PKWFMYQNEGSSITV 374
           P  F ++  G+++T+
Sbjct: 839 PAEFDHRGRGNTLTI 853


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 160/325 (49%), Gaps = 14/325 (4%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           S++++++L L    +T +P  I  LT L+ L L   + LSSLP  I  L  L++L L   
Sbjct: 405 SLEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQ-LSSLPAEIGQLTNLQSLYLFN- 462

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           +KL   P  +  + +L  LYLD   ++ +P+ I  L  L+ LYL   K L  LP+ I  L
Sbjct: 463 NKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNK-LSSLPAEIGQL 521

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
            +L++  L     L ++P  +G++ +L+   +  T +    + I  + NL+S Y      
Sbjct: 522 TNLQSFYLYNTL-LSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLL 580

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
               A+         L  SS  ++++   +  + +L  L L +  L  +++P++I  L +
Sbjct: 581 SSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKL--SSLPAEIGQLTN 638

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP----QIPPNLQ--FVRANGCS 296
           L+ LYL  N   +LPA I  L NL+ L L + K L SLP    Q+  NLQ  ++  N  S
Sbjct: 639 LQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNK-LSSLPAEIGQL-TNLQTLYLFNNKLS 696

Query: 297 SLVTLFGALKLCRSKYTIINCIDSL 321
           SL    G L   ++ Y   N + SL
Sbjct: 697 SLPAEIGQLTNLQTLYLDNNQLSSL 721



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 32/282 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L   YLD T ++ +P++I  LT L+ L L   + LS L   I  L  L++L L 
Sbjct: 564 IGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQ-LSILQAEIGQLTNLQSLYLF 622

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL   P  +  + +L  LYL    ++ +P+ I  L  L+ LYL   K L  LP+ I 
Sbjct: 623 N-NKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNK-LSSLPAEIG 680

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L+TL L    KL ++P  +G++ +L+ L +    +    + I  + NL+SLY    
Sbjct: 681 QLTNLQTLYLFNN-KLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYL--- 736

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                         FN   K S      LP+  G + +L  L L +  L  +++P++I  
Sbjct: 737 --------------FN--NKLSS-----LPAEIGQLTNLQSLYLFNNQL--SSLPAEIGQ 773

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L +L+ LYL+ N   +LPA I  L NL+ L L D  +L SLP
Sbjct: 774 LTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYL-DNNQLSSLP 814



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 32/289 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L  LYL    ++ +P+ I  LT L+ L L   K LSSLP  I  L  L+TL L 
Sbjct: 610 IGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNK-LSSLPAEIGQLTNLQTLYLF 668

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL   P  +  + +L  LYL    ++ +P+ I  L  L+ LYL+  + L  LP+ I 
Sbjct: 669 N-NKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQ-LSSLPAEIG 726

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L++L L    KL ++P  +G++ +L+ L +    +    + I  + NL+SLY    
Sbjct: 727 QLTNLQSLYLFNN-KLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNN 785

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               SS P       +  + +L  L L +  L  +++P  I  L
Sbjct: 786 Q------------------LSSLPA-----EIGQLTNLQSLYLDNNQL--SSLPPGIGQL 820

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
            +L+ LYL+ N   +LP  I  L +  +  L D   L+SL   PP +Q+
Sbjct: 821 TNLQTLYLDNNQLNSLPTEIGRLNSSLKNLLLDGNPLKSL---PPEIQY 866


>gi|297791225|ref|XP_002863497.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309332|gb|EFH39756.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 846

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 8/160 (5%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++  + L  L L+G T++  +P  ++ +  L  L LKGC +L SLP    +L  L+TL L
Sbjct: 604 LSKAEKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTL 661

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           SGCS  K+FP I  ++E    LYLDGT+I+++P+++E L  L +L + +CK L  +P  +
Sbjct: 662 SGCSTFKEFPLISDNIE---TLYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRV 718

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
             LK+L+ L LS C  L+  P+    + SL  L + GTAI
Sbjct: 719 GELKALQELILSDCLNLKIFPEI--NMSSLNILLLDGTAI 756



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 81/136 (59%), Gaps = 6/136 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++  LYLDGT+I+++P+++E L  L +L +K CK L  +P  +  LK L+ L LS C  L
Sbjct: 676 NIETLYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCLNL 735

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K FP+I  +M  L+ L LDGT+I  +P     LP L+ L L+    +  LP  I+ L  L
Sbjct: 736 KIFPEI--NMSSLNILLLDGTAIEVMPQ----LPSLQYLCLSRNAKISYLPDGISQLSQL 789

Query: 126 KTLNLSGCCKLENVPD 141
           K L+L  C  L +VP+
Sbjct: 790 KWLDLKYCTSLTSVPE 805



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 61/274 (22%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSI 88
           L+ L L+GC  L +LP  +  +K L  L L GC+ L+  P++  ++  L  L L G ++ 
Sbjct: 610 LQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTF 667

Query: 89  AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
            E P    +   +E LYL+    + +LP+++  L+ L  LN+  C  LE +P  +G++++
Sbjct: 668 KEFPL---ISDNIETLYLDGTA-ISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELKA 723

Query: 149 LEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALM 208
           L+EL +S          IF   N+ SL                     LL  ++  V   
Sbjct: 724 LQELILSDCL----NLKIFPEINMSSLNIL------------------LLDGTAIEVMPQ 761

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
           LPSL  +C                               L+RN  ++ LP  IS L  L+
Sbjct: 762 LPSLQYLC-------------------------------LSRNAKISYLPDGISQLSQLK 790

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            L+L+ C  L S+P+ PPNLQ + A+GCSSL T+
Sbjct: 791 WLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTV 824



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 5/123 (4%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L   ++ +  L  L L GC +LE LP     L  L TL LSG S F+EFP I+  
Sbjct: 619 TTLKALPHDMKKMKMLAFLNLKGCTSLESLPEM--NLISLKTLTLSGCSTFKEFPLIS-- 674

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            D +  ++L+GTAI  LP ++E L   ++ N+KDCK L+ +P  +  L++L+ +  S C 
Sbjct: 675 -DNIETLYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELILSDCL 733

Query: 788 KLK 790
            LK
Sbjct: 734 NLK 736



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 74/163 (45%), Gaps = 23/163 (14%)

Query: 656 EFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP    +I  +  DGT I +L   +E L  LV L +  CK LE +P  +  LK L  L 
Sbjct: 669 EFPLISDNIETLYLDGTAISQLPTNMEKLQRLVVLNMKDCKMLEEIPGRVGELKALQELI 728

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP-------------ASIELLSGNI--L 756
           LS     + FPEI  S   +L   L+GTAI  +P             A I  L   I  L
Sbjct: 729 LSDCLNLKIFPEINMSSLNIL--LLDGTAIEVMPQLPSLQYLCLSRNAKISYLPDGISQL 786

Query: 757 SNLK--DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
           S LK  D K   SL S      +L+ +   GCS LK V++  G
Sbjct: 787 SQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVSKPPG 829


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 155/323 (47%), Gaps = 35/323 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISS---------- 50
           + ++  +  LYL   +I EVP SI  L  L+ L L G   +S LP  ++           
Sbjct: 217 IGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHL-GSNKISKLPARLTGKAKKSYLIHF 275

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
            K L  L+LS  +K+ + P+ +  + +L  L L    IA +  S + + GL++L L+  +
Sbjct: 276 QKNLTVLDLSN-NKITQIPKYITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLNQ 334

Query: 111 NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
            L   PS I  LKSLK L L+  CK+E++P  + ++ +LE L ++G  I     SI  + 
Sbjct: 335 QLGHFPSQILNLKSLKIL-LASFCKIESIPREISELTNLEVLILNGNKIPALPKSIKHLA 393

Query: 171 NLRSL--------YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKL 221
            LR L          S C E   + S  +    N + +        LP ++T + +L  L
Sbjct: 394 KLRILGLGRFGPENISDCEEYSRNESKKISDDRNRIKR--------LPDTITELQNLEIL 445

Query: 222 DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           +L   G+    +P +I  L  +K+L LN  NF  LP SI  + +L  L  + C+ L SLP
Sbjct: 446 NLD--GVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQIASLRILSCKSCRNLSSLP 503

Query: 282 ---QIPPNLQFVRANGCSSLVTL 301
               I  NL+ +  N C SL+ L
Sbjct: 504 SGLSILKNLKVLVLNKCYSLLGL 526



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 147/319 (46%), Gaps = 47/319 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLK--GCKNLSS--------------- 43
           ++ + +L  L L+G  I  +P SI+ L  L +L L   G +N+S                
Sbjct: 366 ISELTNLEVLILNGNKIPALPKSIKHLAKLRILGLGRFGPENISDCEEYSRNESKKISDD 425

Query: 44  ------LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
                 LP TI+ L+ L  L L G  +++  P+ +  ++ + KL L+  +  ++P SI  
Sbjct: 426 RNRIKRLPDTITELQNLEILNLDGV-EIEILPENIGRLQKMKKLILNCGNFKQLPESICQ 484

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           +  L +L    C+NL  LPS ++ LK+LK L L+ C  L  +   +G ++SL  L V   
Sbjct: 485 IASLRILSCKSCRNLSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNI 544

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNE---PPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
            +    SS   + NLR L  +  NE    P S         N++         ++   +G
Sbjct: 545 RLTELPSSFENLTNLRVLDLAS-NELSVLPDSLG-------NVVYSRDIKNNNVIECKSG 596

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELEL-- 271
           + SL  L+L    +   +I  ++ NL SL+ L L    N  +LP +   L NL++L++  
Sbjct: 597 LVSLRTLNLYHNPI--VSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICD 654

Query: 272 -------EDCKRLQSLPQI 283
                  ED  +LQSL Q+
Sbjct: 655 ANIQQLPEDFGKLQSLEQL 673



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 155/374 (41%), Gaps = 73/374 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ +  L L+  +  ++P SI  +  L +L+ K C+NLSSLP  +S LK L+ L L+
Sbjct: 459 IGRLQKMKKLILNCGNFKQLPESICQIASLRILSCKSCRNLSSLPSGLSILKNLKVLVLN 518

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN------------- 107
            C  L    + V  ++ L  L +    + E+PSS E L  L +L L              
Sbjct: 519 KCYSLLGLGRNVGDIKSLRVLRVRNIRLTELPSSFENLTNLRVLDLASNELSVLPDSLGN 578

Query: 108 -------------ECKN--------------LVRLPSSINGLKSLKTLNLSGCCKLENVP 140
                        ECK+              +V +  ++  L+SL+ LNL G   L ++P
Sbjct: 579 VVYSRDIKNNNVIECKSGLVSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLP 638

Query: 141 DT-----------------------LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
           DT                        GK++SLE+L +    + +   S   M NL+ L  
Sbjct: 639 DTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEV 698

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSD 236
                       +L +    L  S       LP +   + +L +L + +  +   A+P +
Sbjct: 699 RNTKVATLFGFENL-VNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKI--TALPEN 755

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVR-- 291
           I NL SL  L++  N    LP S   L +L EL + DC ++  LP       NL  +R  
Sbjct: 756 IGNLKSLAILWMQNNKINRLPGSFGELESLMEL-VADCNKIPLLPDSFGKLKNLSVLRLN 814

Query: 292 ANGCSSLVTLFGAL 305
           +N  +SL   FG L
Sbjct: 815 SNQITSLPDNFGKL 828



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 135/292 (46%), Gaps = 29/292 (9%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +M +L  L +  T +  +    E L  LE L L G KNL +LP    +L  L+ L +   
Sbjct: 689 NMANLKRLEVRNTKVATL-FGFENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQN- 746

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSING 121
           SK+   P+ + +++ L+ L++    I  +P S  EL   +EL+   +C  +  LP S   
Sbjct: 747 SKITALPENIGNLKSLAILWMQNNKINRLPGSFGELESLMELVA--DCNKIPLLPDSFGK 804

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC- 180
           LK+L  L L+   ++ ++PD  GK+ +L E  ++   + R   S   +K+LR L+     
Sbjct: 805 LKNLSVLRLNSN-QITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANR 863

Query: 181 ------NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-----------SLTKL-D 222
                 N    ++  HL L FN L K    + L L +LT              S+TKL +
Sbjct: 864 LESLPDNFIDLASLEHLFLDFNRLKKIPEKIGL-LKNLTKFSLAQNSLKIIPDSVTKLYE 922

Query: 223 LSDCGLGEAAI---PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L +  +   AI   P  + NL  L EL LN N    LP S+  L  L  L++
Sbjct: 923 LEELNMANNAIKRLPYCMGNLRKLMELNLNSNKLDNLPDSMKNLERLSILKI 974



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 27/239 (11%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
           L SLP+ I   K L  L LS  ++L K P+ +A +  L  L L    +  VP   E  P 
Sbjct: 32  LHSLPIGILKFKNLIVLSLSS-NQLNKLPKSIAELSHLKCLNLQCNMLEAVP---EFPPS 87

Query: 101 LELLYLNECKNLVR-LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA- 158
           +  L LN  KNL++ +P SI  LKS++ L L+    ++ +PD++ ++ +L+ L + G   
Sbjct: 88  IRTLNLN--KNLIKAIPKSIFNLKSIEKLYLNNNL-IDFLPDSIAELSTLKLLSMQGNQL 144

Query: 159 IRRPTSSIFLMKNLRSL--YFSGCNEPP--ASASWHLHLPFNLLGK--SSCPVALMLPSL 212
           I  P  S   + +LR L   F+   E P  +     L   FN + K  S C      PSL
Sbjct: 145 IELPDLSG--LPDLRHLDVAFNRIKELPRLSPKLATLTARFNSIAKIDSMCS-----PSL 197

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           +    L KLDL   G     IP++I NL+S++ LYL  NN V +P SI  L NL++L L
Sbjct: 198 S---YLKKLDL--LGNQIKTIPAEIGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHL 251



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 149/310 (48%), Gaps = 50/310 (16%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++K +  LYL+   I  +P SI  L+ L+LL+++G + L  LP  +S L  LR L+++  
Sbjct: 107 NLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQ-LIELP-DLSGLPDLRHLDVA-F 163

Query: 63  SKLKKFPQI-------------VASMED--------LSKLYLDGTSIAEVPSSIELLPGL 101
           +++K+ P++             +A ++         L KL L G  I  +P+ I  L  +
Sbjct: 164 NRIKELPRLSPKLATLTARFNSIAKIDSMCSPSLSYLKKLDLLGNQIKTIPAEIGNLNSV 223

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           E+LYL +  N+V +P SI  LK+LK L+L G  K+  +P  L           +G A  +
Sbjct: 224 EMLYL-QFNNIVEVPRSIFSLKNLKQLHL-GSNKISKLPARL-----------TGKA--K 268

Query: 162 PTSSIFLMKNLRSLYFSG--CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT 219
            +  I   KNL  L  S     + P   +  ++L   +L   S  +AL+  S   +  L 
Sbjct: 269 KSYLIHFQKNLTVLDLSNNKITQIPKYITELVNL--KVLNLRSNKIALLRGSFKKMKGLK 326

Query: 220 KLDLS-DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
            L LS +  LG    PS I NL SLK L  +     ++P  IS L NLE L L   K   
Sbjct: 327 VLKLSLNQQLGH--FPSQILNLKSLKILLASFCKIESIPREISELTNLEVLILNGNK--- 381

Query: 279 SLPQIPPNLQ 288
            +P +P +++
Sbjct: 382 -IPALPKSIK 390



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 6/176 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
              + +LS+  ++   +T +P S   L  L +L LK  + L SLP     L  L  L L 
Sbjct: 825 FGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANR-LESLPDNFIDLASLEHLFLD 883

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV-RLPSSI 119
             ++LKK P+ +  +++L+K  L   S+  +P S+  L  LE   LN   N + RLP  +
Sbjct: 884 -FNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELE--ELNMANNAIKRLPYCM 940

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
             L+ L  LNL+   KL+N+PD++  +E L  L +     RR +  ++ M NL+ +
Sbjct: 941 GNLRKLMELNLNSN-KLDNLPDSMKNLERLSILKIHTNQFRRLSDCVYEMTNLKEI 995



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI-ELLS 752
           ++RLP TI+ L+ L  LNL G+ +    PE      ++ ++ L     + LP SI ++ S
Sbjct: 429 IKRLPDTITELQNLEILNLDGV-EIEILPENIGRLQKMKKLILNCGNFKQLPESICQIAS 487

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             ILS  K C+NL SLPS ++ L++L+++  + C  L  +   +G ++SL V
Sbjct: 488 LRILS-CKSCRNLSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRV 538


>gi|168068753|ref|XP_001786194.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661953|gb|EDQ48994.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 517

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 136/275 (49%), Gaps = 26/275 (9%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +  +P SI  L  L  L L  C++L +LP +I +L     L L GC  LK  P+ + ++ 
Sbjct: 1   LKALPESIGNLNSLVDLDLFRCRSLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLN 60

Query: 77  DLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            L KL L D  S+  +P SI  L  L  L L  CK++  LP SI  L SL  LNL GC  
Sbjct: 61  SLVKLNLGDCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRS 120

Query: 136 LENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           LE + +++G + SL EL++ G  +++    SI  + +L  L    C    A       LP
Sbjct: 121 LEALSESIGNLNSLVELNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKA-------LP 173

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNF 253
                           S+  + SL KL+L DC   EA + S I NL+SL +L L R  + 
Sbjct: 174 ---------------ESIGNLNSLVKLNLGDCQSLEALLKS-IGNLNSLVDLDLFRCRSL 217

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
             LP SI+ L +L +L L  C+ L++L +   NL 
Sbjct: 218 KALPESIANLNSLVKLNLYGCRSLEALQESIGNLN 252



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 142/304 (46%), Gaps = 36/304 (11%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P SI  L  L  L L GC++L +L  +I +L  L  L LS C  LK     + ++
Sbjct: 216 SLKALPESIANLNSLVKLNLYGCRSLEALQESIGNLNSLVELNLSACVSLKALRDSIGNL 275

Query: 76  EDLSK--LYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             L    LY  G S+  +P SI  L  L  L L  C++L  LP SI  L SL  LNL GC
Sbjct: 276 NSLEDFDLYTCG-SLKALPESIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVDLNLYGC 334

Query: 134 CKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA------- 185
             L+ +P+++G + SL +LD+ +  +++    SI  + +L  L    C    A       
Sbjct: 335 VSLKALPESIGNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGN 394

Query: 186 -------------------SASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSD 225
                                + +  +  NL G   C     LP S+  + SL  L+L  
Sbjct: 395 LNSLLDLRVCKSLKALRESIGNLNSLVKLNLYG---CRSLEALPESIGNLISLVDLNLYG 451

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
           C +   A+P  I NL+SL +L LN   +   LP SI  L +L +L L DC+ L++LP+  
Sbjct: 452 C-VSLKALPESIGNLNSLVDLDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSI 510

Query: 285 PNLQ 288
            NL 
Sbjct: 511 DNLN 514



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 137/281 (48%), Gaps = 6/281 (2%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D  S+  +P SI  L  L  L L+ CK++ +LP +I +L  L  L L GC  L+   + +
Sbjct: 69  DCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRSLEALSESI 128

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            ++  L +L L G  S+  +P SI  L  L  L L  C +L  LP SI  L SL  LNL 
Sbjct: 129 GNLNSLVELNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLG 188

Query: 132 GCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASAS 188
            C  LE +  ++G + SL +LD+    +++    SI  + +L  L   GC   E    + 
Sbjct: 189 DCQSLEALLKSIGNLNSLVDLDLFRCRSLKALPESIANLNSLVKLNLYGCRSLEALQESI 248

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
            +L+    L   +   +  +  S+  + SL   DL  CG    A+P  I NL+SL +L L
Sbjct: 249 GNLNSLVELNLSACVSLKALRDSIGNLNSLEDFDLYTCG-SLKALPESIGNLNSLVKLNL 307

Query: 249 NR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
               +   LP SI  L +L +L L  C  L++LP+   NL 
Sbjct: 308 GVCQSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLN 348



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 148/296 (50%), Gaps = 13/296 (4%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P SI  L  L  L L  C++L +LP +I +L  L  L+L  C  +K  P+ + ++
Sbjct: 48  SLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGNL 107

Query: 76  EDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L KL L G  S+  +  SI  L  L  L L  C +L  LP SI  L SL  L+L  C 
Sbjct: 108 NSLVKLNLYGCRSLEALSESIGNLNSLVELNLYGCVSLKALPESIGNLNSLVDLDLYTCG 167

Query: 135 KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASW 189
            L+ +P+++G + SL +L++    ++     SI  + +L  L    C      P + A+ 
Sbjct: 168 SLKALPESIGNLNSLVKLNLGDCQSLEALLKSIGNLNSLVDLDLFRCRSLKALPESIANL 227

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
           +  +  NL G  S  +  +  S+  + SL +L+LS C +   A+   I NL+SL++  L 
Sbjct: 228 NSLVKLNLYGCRS--LEALQESIGNLNSLVELNLSAC-VSLKALRDSIGNLNSLEDFDLY 284

Query: 250 R-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRAN--GCSSLVTL 301
              +   LP SI  L +L +L L  C+ L++LP+   NL   V  N  GC SL  L
Sbjct: 285 TCGSLKALPESIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVDLNLYGCVSLKAL 340



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 144/287 (50%), Gaps = 13/287 (4%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P SI  L     L L GC +L +LP +I +L  L  L L  C  L+  P+ + ++
Sbjct: 24  SLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNL 83

Query: 76  EDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L KL L    S+  +P SI  L  L  L L  C++L  L  SI  L SL  LNL GC 
Sbjct: 84  NSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRSLEALSESIGNLNSLVELNLYGCV 143

Query: 135 KLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHL 191
            L+ +P+++G + SL +LD+ +  +++    SI  + +L  L    C   E    +  +L
Sbjct: 144 SLKALPESIGNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALLKSIGNL 203

Query: 192 HLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
           +   + L    C     LP S+  + SL KL+L  C   E A+   I NL+SL EL L+ 
Sbjct: 204 NSLVD-LDLFRCRSLKALPESIANLNSLVKLNLYGCRSLE-ALQESIGNLNSLVELNLSA 261

Query: 251 NNFVTLPA---SISGLLNLEELELEDCKRLQSLPQIPPNLQ-FVRAN 293
              V+L A   SI  L +LE+ +L  C  L++LP+   NL   V+ N
Sbjct: 262 --CVSLKALRDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLVKLN 306



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)

Query: 645 GNCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           G+   L E       +V++ L D   +  L  +I  L  LV+L L  CK+++ LP +I  
Sbjct: 47  GSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGN 106

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDC 762
           L  L  LNL G        E   + + L+E++L G  +++ LP SI  L+  +  +L  C
Sbjct: 107 LNSLVKLNLYGCRSLEALSESIGNLNSLVELNLYGCVSLKALPESIGNLNSLVDLDLYTC 166

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +LK+LP +I  L SL  +    C  L+ + +++G + SL
Sbjct: 167 GSLKALPESIGNLNSLVKLNLGDCQSLEALLKSIGNLNSL 206



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV L L  C++L+ LP +I  L     L L G    +  PE   + +
Sbjct: 1   LKALPESIGNLNSLVDLDLFRCRSLKALPESIGNLNSFVQLRLYGCGSLKALPESIGNLN 60

Query: 730 QLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L++++L +  ++  LP SI  L+  +  +L+ CK++K+LP +I  L SL  +   GC  
Sbjct: 61  SLVKLNLGDCQSLEALPKSIGNLNSLVKLDLRVCKSMKALPESIGNLNSLVKLNLYGCRS 120

Query: 789 LKNVTETLGKVESL 802
           L+ ++E++G + SL
Sbjct: 121 LEALSESIGNLNSL 134



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 1/110 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV+L L GC++LE LP +I  L  L  LNL G    +  PE   + +
Sbjct: 407 LKALRESIGNLNSLVKLNLYGCRSLEALPESIGNLISLVDLNLYGCVSLKALPESIGNLN 466

Query: 730 QLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
            L+++ L    +++ LP SI  L+  +  NL DC++L++LP +I+ L SL
Sbjct: 467 SLVDLDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSL 516



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 684 VQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIR 742
           VQL L GC +L+ LP +I  L  L  LNL         P+   + + L+++ L    +++
Sbjct: 39  VQLRLYGCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSLVKLDLRVCKSMK 98

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L+  +  NL  C++L++L  +I  L SL  +   GC  LK + E++G + SL
Sbjct: 99  ALPESIGNLNSLVKLNLYGCRSLEALSESIGNLNSLVELNLYGCVSLKALPESIGNLNSL 158



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV+L L GC++LE L  +I  L  L  LNLS     +   +   + +
Sbjct: 217 LKALPESIANLNSLVKLNLYGCRSLEALQESIGNLNSLVELNLSACVSLKALRDSIGNLN 276

Query: 730 QLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L +  L    +++ LP SI  L+  +  NL  C++L++LP +I  L SL  +   GC  
Sbjct: 277 SLEDFDLYTCGSLKALPESIGNLNSLVKLNLGVCQSLEALPESIGNLNSLVDLNLYGCVS 336

Query: 789 LKNVTETLGKVESL 802
           LK + E++G + SL
Sbjct: 337 LKALPESIGNLNSL 350



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 11/138 (7%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV+L L  C++LE LP++I  L   S L+L      +   E   + +
Sbjct: 361 LKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLN--SLLDLRVCKSLKALRESIGNLN 418

Query: 730 QLLEIHLEGT-AIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPS 784
            L++++L G  ++  LP SI    GN++S    NL  C +LK+LP +I  L SL  +  +
Sbjct: 419 SLVKLNLYGCRSLEALPESI----GNLISLVDLNLYGCVSLKALPESIGNLNSLVDLDLN 474

Query: 785 GCSKLKNVTETLGKVESL 802
            C  LK + E++G + SL
Sbjct: 475 TCGSLKALPESIGNLNSL 492



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 2/155 (1%)

Query: 650 LWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           L E       +V++ LS    ++ L  +I  L  L    L  C +L+ LP +I  L  L 
Sbjct: 244 LQESIGNLNSLVELNLSACVSLKALRDSIGNLNSLEDFDLYTCGSLKALPESIGNLNSLV 303

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKS 767
            LNL         PE   + + L++++L G  +++ LP SI  L+  +  +L  C +LK+
Sbjct: 304 KLNLGVCQSLEALPESIGNLNSLVDLNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKA 363

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           LP +I  L SL  +    C  L+ + +++G + SL
Sbjct: 364 LPESIGNLNSLVKLNLGDCQSLEALPKSIGNLNSL 398



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  LV L L  C +L+ LP +I  L  L  LNL         P+   + +
Sbjct: 337 LKALPESIGNLNSLVDLDLYTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIGNLN 396

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            LL++ +   +++ L  SI  L+  +  NL  C++L++LP +I  L SL  +   GC  L
Sbjct: 397 SLLDLRV-CKSLKALRESIGNLNSLVKLNLYGCRSLEALPESIGNLISLVDLNLYGCVSL 455

Query: 790 KNVTETLGKVESL 802
           K + E++G + SL
Sbjct: 456 KALPESIGNLNSL 468



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 25/159 (15%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +  LS +I  L  LV+L L GC +L+ LP +I  L  L  L+L      +  PE   + +
Sbjct: 121 LEALSESIGNLNSLVELNLYGCVSLKALPESIGNLNSLVDLDLYTCGSLKALPESIGNLN 180

Query: 730 QLLEIHLEGT-------------------------AIRGLPASIELLSGNILSNLKDCKN 764
            L++++L                            +++ LP SI  L+  +  NL  C++
Sbjct: 181 SLVKLNLGDCQSLEALLKSIGNLNSLVDLDLFRCRSLKALPESIANLNSLVKLNLYGCRS 240

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           L++L  +I  L SL  +  S C  LK + +++G + SLE
Sbjct: 241 LEALQESIGNLNSLVELNLSACVSLKALRDSIGNLNSLE 279



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           L L  CK+L+ L  +I  L  L  LNL G       PE   +   L++++L G  +++ L
Sbjct: 399 LDLRVCKSLKALRESIGNLNSLVKLNLYGCRSLEALPESIGNLISLVDLNLYGCVSLKAL 458

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P SI  L+  +  +L  C +LK+LP +I  L SL  +    C  L+ + +++  + SL
Sbjct: 459 PESIGNLNSLVDLDLNTCGSLKALPESIGNLNSLVKLNLGDCQSLEALPKSIDNLNSL 516


>gi|307135899|gb|ADN33763.1| melon resistance-like protein [Cucumis melo subsp. melo]
          Length = 534

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 178/430 (41%), Gaps = 94/430 (21%)

Query: 29  GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TS 87
            LE L L+ CK L  +  +I+SL  L TL+L GC  L+K P     ++ L  L L G   
Sbjct: 95  NLEKLYLRSCKRLEMIHGSIASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIK 154

Query: 88  IAEVP-----SSIE-------------------LLPGLELLYLNECKNLVRLPSSINGLK 123
           + E+P     SS++                    L  L +L    C+NL RLP  I+   
Sbjct: 155 LKEIPDLSASSSLKELHLRECYNLRIIHDSVGRFLDKLVILDFEGCRNLERLPRYISKSG 214

Query: 124 SLKTLNLSGCCKLENVPDTLG-------KVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           S++ LNL  C K+E + D          K ESL+ L++S     +  +      NL  L 
Sbjct: 215 SIEVLNLDSCRKIEQIFDNYFEKFPSHLKYESLKVLNLSYCQNLKGITDFSFASNLEILD 274

Query: 177 FSGC------NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC---- 226
             GC      +E   S    + L  +     SC +   LPS   + SL  L L++C    
Sbjct: 275 LRGCFSLRTIHESVGSLDKLIALKLD-----SCHLLEELPSCLRLKSLDSLSLTNCYKLE 329

Query: 227 ----------GLGEAAIPSDIDNLH----SLKELYLNRNNFVTLPASISGLLNLEELELE 272
                      L E  +   ++NL     +LKEL L+ N F +LP S+    +L  LEL 
Sbjct: 330 QLPEFDENMKSLREMNLKDFLENLSNFCTTLKELNLSGNKFCSLP-SLQNFSSLRHLELR 388

Query: 273 DCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAIS 332
           +CK L+++ +IP  L  V A+GC   V                        +  + +A  
Sbjct: 389 NCKFLRNIVKIPHCLTRVDASGCELFV------------------------ISPDYIADI 424

Query: 333 MLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVV-GFAI 391
           M R     Q +     K  ++   S+IPK+   Q   SS   T  S+  N + ++    +
Sbjct: 425 MFRN----QDLELRNFKRELIVAYSKIPKFCNNQTTESS---TSFSFQQNSDTIIPALVV 477

Query: 392 CCVFQVPKHS 401
           C VF+V + S
Sbjct: 478 CVVFKVDEDS 487



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 25/174 (14%)

Query: 651 WEEADEFPDIVQVLSDGTDIRELSLA----IELLFG-------LVQLTLNGCKNLERLPR 699
           W   +E PD     S   ++ +L L     +E++ G       LV L L GC+NLE+LP 
Sbjct: 81  WRLLEETPD----FSVALNLEKLYLRSCKRLEMIHGSIASLSKLVTLDLEGCENLEKLPS 136

Query: 700 TISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASI-ELLSGNILS 757
           +   LK L  LNLSG  K +E P++++S   L E+HL E   +R +  S+   L   ++ 
Sbjct: 137 SFLMLKSLEVLNLSGCIKLKEIPDLSAS-SSLKELHLRECYNLRIIHDSVGRFLDKLVIL 195

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG-------KVESLEV 804
           + + C+NL+ LP  I+   S+ ++    C K++ + +          K ESL+V
Sbjct: 196 DFEGCRNLERLPRYISKSGSIEVLNLDSCRKIEQIFDNYFEKFPSHLKYESLKV 249



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 17/121 (14%)

Query: 682 GLVQLTLNGCKNLERLPRTI-SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
           GLV L +NG  N  + P  I    K L  ++LS      E P+ + +      ++LE   
Sbjct: 49  GLVGLVINGVSN--KHPGIIFEDCKMLKHVDLSYWRLLEETPDFSVA------LNLEKLY 100

Query: 741 IRGLPASIELLSGNILS-------NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVT 793
           +R     +E++ G+I S       +L+ C+NL+ LPS+   L+SL ++  SGC KLK + 
Sbjct: 101 LRSC-KRLEMIHGSIASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIP 159

Query: 794 E 794
           +
Sbjct: 160 D 160


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 12/282 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L +L+LD   +T +P  IE L  L+ L L     L++LP  I  LK L+ L L 
Sbjct: 105 IEHLKELQELHLDYNQLTTLPKDIEHLKELQELHL-DYNQLTTLPKEIGYLKELQVLHLY 163

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L+L    +  +P  I  L  L++L+L + + L  LP  I 
Sbjct: 164 D-NQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQ-LTTLPKEIG 221

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L++L+ L L+   +L+ +P  +G++++L+ L++S   +    + I  ++NL+ LY +  
Sbjct: 222 KLQNLQVLELTNN-QLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNN 280

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P    +   L    L  +       LP   G + +L  L+LS   L    +P DI
Sbjct: 281 QLTTLPKDIGYLKELQILELTNNQLKT---LPKEIGQLQNLQVLNLSHNKL--TTLPKDI 335

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
             L +L+ELYL  N   TLP  I  L  L+ L L+D   L+S
Sbjct: 336 GKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLDDIPALRS 377



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            ++P DI++L  L+EL+L+ N   TLP  I  L  L+EL L D  +L +LP+
Sbjct: 99  TSLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHL-DYNQLTTLPK 149


>gi|168041140|ref|XP_001773050.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675597|gb|EDQ62090.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 356

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 145/290 (50%), Gaps = 11/290 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + S+  L DL ++   S+T +P+ +  LT L  L +KGC +L+SLP  + +L  L TL +
Sbjct: 22  IGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGCSSLTSLPNELGNLTSLTTLNI 81

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C  L   P  + +   L+ L ++  S +  +P+ +  L  L +L + EC +L  LP+ 
Sbjct: 82  SWCLSLTSLPNELGNHSSLTTLNMEECSRLTSLPNELGHLTSLTILNMMECSSLTSLPNE 141

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY-- 176
           +  L SL TLNL  C +L ++P+ LG + SL  L++      R TS    + NL SL   
Sbjct: 142 LGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNME--RCSRLTSLPNELGNLTSLTTL 199

Query: 177 -FSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAI 233
               C+   +  +   HL     L    C     LP+  G   SLT L++ +C     ++
Sbjct: 200 NMEECSRLTSLPNELGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNMEECS-SLTSL 258

Query: 234 PSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           P+++ NL SL  L +   ++  +LP  +  L +L  L +E C  L SLP 
Sbjct: 259 PNELGNLISLTTLNMGGCSSLTSLPKELGNLTSLTTLNMERCSSLSSLPN 308



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 2/158 (1%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L ++  S +T +P+ +  LT L  L +KGC +L+SLP  +     L TL +
Sbjct: 190 LGNLTSLTTLNMEECSRLTSLPNELGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNM 249

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CS L   P  + ++  L+ L + G +S+  +P  +  L  L  L +  C +L  LP+ 
Sbjct: 250 EECSSLTSLPNELGNLISLTTLNMGGCSSLTSLPKELGNLTSLTTLNMERCSSLSSLPNE 309

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
           +  L SL TLN+S C  L ++P+ L  + SL  L++ G
Sbjct: 310 LGNLTSLTTLNISWCLSLTSLPNELDNLTSLTTLNMEG 347



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 8/218 (3%)

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLE 150
           +P+SI  L  L+ L +  C++L  LP+ +  L SL +LN+ GC  L ++P+ LG + SL 
Sbjct: 18  LPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGCSSLTSLPNELGNLTSLT 77

Query: 151 ELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALM 208
            L++S   ++    + +    +L +L    C+   +  +   HL    +L    C     
Sbjct: 78  TLNISWCLSLTSLPNELGNHSSLTTLNMEECSRLTSLPNELGHLTSLTILNMMECSSLTS 137

Query: 209 LPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNL 266
           LP+ L  + SLT L+L  C     ++P+++ NL SL  L + R +   +LP  +  L +L
Sbjct: 138 LPNELGNLTSLTTLNLERCS-RLTSLPNELGNLTSLTTLNMERCSRLTSLPNELGNLTSL 196

Query: 267 EELELEDCKRLQSLPQI---PPNLQFVRANGCSSLVTL 301
             L +E+C RL SLP       +L  +   GCSSL +L
Sbjct: 197 TTLNMEECSRLTSLPNELGHLTSLTTLNMKGCSSLTSL 234



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 9/191 (4%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG- 156
           +  L++L L  C+ L  LP+SI  L SLK LN+  C  L ++P+ LG + SL  L++ G 
Sbjct: 1   MTSLKILNLQYCERLKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGC 60

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHLPFNLLGKSSCPVALMLPSLT 213
           +++    + +  + +L +L  S C      P     H  L    L    C     LP+  
Sbjct: 61  SSLTSLPNELGNLTSLTTLNISWCLSLTSLPNELGNHSSLTT--LNMEECSRLTSLPNEL 118

Query: 214 G-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELEL 271
           G + SLT L++ +C     ++P+++ NL SL  L L R +   +LP  +  L +L  L +
Sbjct: 119 GHLTSLTILNMMECS-SLTSLPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNM 177

Query: 272 EDCKRLQSLPQ 282
           E C RL SLP 
Sbjct: 178 ERCSRLTSLPN 188



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 80/139 (57%), Gaps = 2/139 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +  L+ L + G +S+T +P+ +   T L  L ++ C +L+SLP  + +L  L TL +
Sbjct: 214 LGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNMEECSSLTSLPNELGNLISLTTLNM 273

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS L   P+ + ++  L+ L ++  +S++ +P+ +  L  L  L ++ C +L  LP+ 
Sbjct: 274 GGCSSLTSLPKELGNLTSLTTLNMERCSSLSSLPNELGNLTSLTTLNISWCLSLTSLPNE 333

Query: 119 INGLKSLKTLNLSGCCKLE 137
           ++ L SL TLN+ G  K++
Sbjct: 334 LDNLTSLTTLNMEGVLKVD 352



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 26/201 (12%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTD--IRELSLAIEL--LFGLVQ 685
           P E GN           CSRL    +E  ++  + +   +   R  SL  EL  L  L  
Sbjct: 139 PNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNMERCSRLTSLPNELGNLTSLTT 198

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGL 744
           L +  C  L  LP  +  L  L+TLN+ G S     P        L  +++E  +++  L
Sbjct: 199 LNMEECSRLTSLPNELGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNMEECSSLTSL 258

Query: 745 PASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           P  +    GN++S    N+  C +L SLP  +  L SL  +    CS L ++   LG + 
Sbjct: 259 PNEL----GNLISLTTLNMGGCSSLTSLPKELGNLTSLTTLNMERCSSLSSLPNELGNLT 314

Query: 801 SLEVRLSSW--NRPKMQNDFD 819
           SL     SW  +   + N+ D
Sbjct: 315 SLTTLNISWCLSLTSLPNELD 335



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTD--IRELSLAIEL--LFGLVQLTLNGCKNLERLPRTIS 702
           CS L    +E  ++  + +   +   R  SL  EL  L  L  L +  C  L  LP  + 
Sbjct: 132 CSSLTSLPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNMERCSRLTSLPNELG 191

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKD 761
            L  L+TLN+   S+    P        L  ++++G +++  LP  +   +     N+++
Sbjct: 192 NLTSLTTLNMEECSRLTSLPNELGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNMEE 251

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           C +L SLP+ +  L SL  +   GCS L ++ + LG + SL
Sbjct: 252 CSSLTSLPNELGNLISLTTLNMGGCSSLTSLPKELGNLTSL 292



 Score = 43.9 bits (102), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 16/178 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CSRL    +E   +  +    + + + +  L   +  L  L  
Sbjct: 91  PNELGNHSSLTTLNMEECSRLTSLPNELGHLTSLTILNMMECSSLTSLPNELGNLTSLTT 150

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGL 744
           L L  C  L  LP  +  L  L+TLN+   S+    P    +   L  +++E  + +  L
Sbjct: 151 LNLERCSRLTSLPNELGNLTSLTTLNMERCSRLTSLPNELGNLTSLTTLNMEECSRLTSL 210

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P  +  L+     N+K C +L SLP+ +    SL  +    CS L ++   LG + SL
Sbjct: 211 PNELGHLTSLTTLNMKGCSSLTSLPNELGHFTSLTTLNMEECSSLTSLPNELGNLISL 268



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 1/134 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++ L  +I  L  L  L +  C++L  LP  +  L  L++LN+ G S     P    +  
Sbjct: 15  LKLLPTSIGSLISLKDLNIENCQSLTSLPNELGNLTSLTSLNMKGCSSLTSLPNELGNLT 74

Query: 730 QLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L  +++    ++  LP  +   S     N+++C  L SLP+ +  L SL ++    CS 
Sbjct: 75  SLTTLNISWCLSLTSLPNELGNHSSLTTLNMEECSRLTSLPNELGHLTSLTILNMMECSS 134

Query: 789 LKNVTETLGKVESL 802
           L ++   LG + SL
Sbjct: 135 LTSLPNELGNLTSL 148



 Score = 40.0 bits (92), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  L ++ C +L  LP  +     L+TLN+   S+    P        L  +++ E 
Sbjct: 73  LTSLTTLNISWCLSLTSLPNELGNHSSLTTLNMEECSRLTSLPNELGHLTSLTILNMMEC 132

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+     NL+ C  L SLP+ +  L SL  +    CS+L ++   LG 
Sbjct: 133 SSLTSLPNELGNLTSLTTLNLERCSRLTSLPNELGNLTSLTTLNMERCSRLTSLPNELGN 192

Query: 799 VESL 802
           + SL
Sbjct: 193 LTSL 196


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 147/318 (46%), Gaps = 18/318 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +  +   I  L  L  L L   + L +LP  I  L+ LR L+L 
Sbjct: 86  IGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNE-LETLPAAIGELENLRDLDL- 143

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++ + FP ++  +++L +L LD   +   P+ I  L  L+ L L   K L  LP  I 
Sbjct: 144 GDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNK-LKLLPDEIG 202

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+ LNLS   KLE++P  +G++++L+ L +    +     +I  ++NL+ LY    
Sbjct: 203 ELKNLQYLNLS-LNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRN 261

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           N               +L  S   +  +   +  +  L  L LS   L    +P  I  L
Sbjct: 262 NLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKL--ETLPVAIGEL 319

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP------NLQF--VRA 292
            +L++LYLN N   TLPA+I  L NL EL    C R   L  +P       +LQ+  ++ 
Sbjct: 320 ENLQKLYLNDNKLETLPAAIGELDNLREL----CLRNNKLKILPSEIGELGDLQYLDLKN 375

Query: 293 NGCSSLVTLFGALKLCRS 310
           N   +L    G LK  R 
Sbjct: 376 NKLETLPAAIGELKNLRE 393



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 130/266 (48%), Gaps = 12/266 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L LD   +   P+ I  L  L+ L L G K L  LP  I  LK L+ L LS
Sbjct: 155 IRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNK-LKLLPDEIGELKNLQYLNLS 213

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL+  P  +  +++L  L+L    +  +P +I  L  L+ LYL+   NL  LP  I 
Sbjct: 214 -LNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHR-NNLKTLPVEIE 271

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            LK L+ L LSG  KLE +P  + K++ L  L +SG  +     +I  ++NL+ LY +  
Sbjct: 272 KLKELRILQLSGN-KLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLNDN 330

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                PA+     +L    L  +   +   LPS  G +  L  LDL +  L    +P+ I
Sbjct: 331 KLETLPAAIGELDNLRELCLRNNKLKI---LPSEIGELGDLQYLDLKNNKL--ETLPAAI 385

Query: 238 DNLHSLKELYLNRNNFVTLPASISGL 263
             L +L+EL L+ N   TLP  I  L
Sbjct: 386 GELKNLRELNLSGNKLETLPIEIEKL 411



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 19/166 (11%)

Query: 657 FPDIVQVLS-------DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLST 709
           FP +++ L        D   +      I  L  L  L L G K L+ LP  I  LK L  
Sbjct: 151 FPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNK-LKLLPDEIGELKNLQY 209

Query: 710 LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC----KNL 765
           LNLS L+K    P        L  + L    +  LP +I       L NL+       NL
Sbjct: 210 LNLS-LNKLESLPPEIGELKNLQHLFLGDNKLEILPIAI-----GELENLQKLYLHRNNL 263

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
           K+LP  I  L+ LR++  SG +KL+ +   + K++ L +   S N+
Sbjct: 264 KTLPVEIEKLKELRILQLSG-NKLETLPVEIEKLKELRILQLSGNK 308


>gi|215261581|gb|ACJ64861.1| disease resistance protein RPP1-like protein R7 [Arabidopsis
           thaliana]
          Length = 1135

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 37/328 (11%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L +L L + +S+ E+PSSIE L  L++L L+ C +L  LP   ++ K L+ L+L
Sbjct: 665 LSTATNLEELKLRNCSSLVELPSSIEKLISLQILDLQDCSSLVELPSFGNTTK-LKKLDL 723

Query: 60  SGCSKLKKFPQIV-------------------ASMEDLSKL----YLDGTSIAEVPSSIE 96
             CS L K P  +                    ++E+ +KL      + +S+ E+P SI 
Sbjct: 724 GNCSSLVKLPPSINANNLQELSLINCSRVVELPAIENATKLRELELQNCSSLIELPLSIG 783

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
               L +L ++ C +LV+LPSSI  + SL+  +LS C  L  +P ++G ++ L  L + G
Sbjct: 784 TANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLQKLYMLRMCG 843

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH---LPFNLLGKSSCPVALMLPSLT 213
            +      +   + +LR L  + C++  +      H   L  N       P+++   S  
Sbjct: 844 CSKLETLPTNINLISLRILNLTDCSQLKSFPEISTHISELRLNGTAIKEVPLSITSWSRL 903

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            V  ++  +     L E     DI     + +L L   +   +P  +  +  L +L L +
Sbjct: 904 AVYEMSYFE----SLKEFPYALDI-----ITDLLLVSEDIQEVPPRVKRMSRLRDLRLNN 954

Query: 274 CKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           C  L SLPQ+  +L ++ A+ C SL  L
Sbjct: 955 CNNLVSLPQLSNSLAYIYADNCKSLERL 982



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 72/169 (42%), Gaps = 53/169 (31%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +++ E+PSSI  L  L +L + GC  L +LP  I+ L  LR L L+ CS+LK FP+I   
Sbjct: 821 SNLVELPSSIGNLQKLYMLRMCGCSKLETLPTNIN-LISLRILNLTDCSQLKSFPEISTH 879

Query: 75  MEDLSKLYLDGTSIAEVPSSI--------------------------------------- 95
              +S+L L+GT+I EVP SI                                       
Sbjct: 880 ---ISELRLNGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPYALDIITDLLLVSEDIQE 936

Query: 96  -----ELLPGLELLYLNECKNLVRLPSSINGLKSL-----KTLNLSGCC 134
                + +  L  L LN C NLV LP   N L  +     K+L    CC
Sbjct: 937 VPPRVKRMSRLRDLRLNNCNNLVSLPQLSNSLAYIYADNCKSLERLDCC 985



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 51/173 (29%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS+ +++ EL  +I  L  L  L + GC  LE LP  I+ +  L  LNL+  S+ + FPE
Sbjct: 817 LSNCSNLVELPSSIGNLQKLYMLRMCGCSKLETLPTNINLIS-LRILNLTDCSQLKSFPE 875

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIE------------------------------LLSG 753
           I++    + E+ L GTAI+ +P SI                               L+S 
Sbjct: 876 IST---HISELRLNGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPYALDIITDLLLVSE 932

Query: 754 NI---------LSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           +I         +S L+D     C NL SLP   N   SL  +Y   C  L+ +
Sbjct: 933 DIQEVPPRVKRMSRLRDLRLNNCNNLVSLPQLSN---SLAYIYADNCKSLERL 982



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 30/188 (15%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSL----------AIELLFGLVQLTLNGCKNL 694
           GNCS L +     P I     +  +++ELSL          AIE    L +L L  C +L
Sbjct: 724 GNCSSLVKLP---PSI-----NANNLQELSLINCSRVVELPAIENATKLRELELQNCSSL 775

Query: 695 ERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSG 753
             LP +I     L  L++SG S   + P        L    L   + +  LP+SI  L  
Sbjct: 776 IELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLQK 835

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL--------EVR 805
             +  +  C  L++LP+ IN L SLR++  + CS+LK+  E    +  L        EV 
Sbjct: 836 LYMLRMCGCSKLETLPTNIN-LISLRILNLTDCSQLKSFPEISTHISELRLNGTAIKEVP 894

Query: 806 LS--SWNR 811
           LS  SW+R
Sbjct: 895 LSITSWSR 902



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 38/179 (21%)

Query: 646 NCSRLWEEADEFPDIV--QVLSDGTDIRELSLAIEL-LFG----LVQLTLNGCKNLERLP 698
           NCS L E       ++  Q+L    D+++ S  +EL  FG    L +L L  C +L +LP
Sbjct: 678 NCSSLVELPSSIEKLISLQIL----DLQDCSSLVELPSFGNTTKLKKLDLGNCSSLVKLP 733

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE------------GTA------ 740
            +I+A   L  L+L   S+  E P I ++  +L E+ L+            GTA      
Sbjct: 734 PSINA-NNLQELSLINCSRVVELPAIENA-TKLRELELQNCSSLIELPLSIGTANNLWIL 791

Query: 741 -IRG------LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            I G      LP+SI  ++     +L +C NL  LPS+I  L+ L M+   GCSKL+ +
Sbjct: 792 DISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELPSSIGNLQKLYMLRMCGCSKLETL 850


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 146/305 (47%), Gaps = 23/305 (7%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D   +TE+P+ +  LT LE L L     +++LP  I+ L+ L TL LS  + +   P  +
Sbjct: 33  DKDKLTEIPAEVFALTWLEELDL-SRNEMTTLPDAIAKLQNLSTLYLSH-NGITTLPDAI 90

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
           A +++L+ L L    I  +P +I  L  L  L L+  K +  LP +I  L +L TLNLS 
Sbjct: 91  AQLQNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNK-ITTLPDAIAKLHNLTTLNLS- 148

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPASASW 189
             ++  +PD + K+ +L  L+++G  I     +I  + NL SL  SG      P A A  
Sbjct: 149 VNRIRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKL 208

Query: 190 HLHLPFNLL--GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
           H     +L   G ++ P A     +  + +LT LDLS  G     +P  I  L +L  L 
Sbjct: 209 HNLTSLSLWNNGITTLPDA-----IAKLHNLTSLDLS--GNRITTLPDAIAKLQNLSTLD 261

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
           L  N   TLP +I+ L NL  L+      L+  P   P L+ V+  G  ++   F  L+ 
Sbjct: 262 LRGNEITTLPDAIAQLHNLTSLD------LRRNPIEKPPLEVVKK-GIEAIRDYFRQLEA 314

Query: 308 CRSKY 312
             + Y
Sbjct: 315 EGTDY 319



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 29/251 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A +++LS LYL    IT +P +I  L  L  L L     +++LP  I+ L  L TL LS
Sbjct: 67  IAKLQNLSTLYLSHNGITTLPDAIAQLQNLNSLDL-SYNGITTLPDAIAKLHNLTTLNLS 125

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +K+   P  +A + +L+ L L    I  +P +I  L  L  L LN  + +  LP +I 
Sbjct: 126 -VNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLNLNGNR-ITTLPDAIA 183

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L +L+LSG  ++  +PD + K+ +L  L +    I     +I  + NL SL  SG 
Sbjct: 184 KLHNLTSLDLSGN-RITTLPDAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGN 242

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                   +  +  ++  + +L+ LDL   G     +P  I  L
Sbjct: 243 R-----------------------ITTLPDAIAKLQNLSTLDLR--GNEITTLPDAIAQL 277

Query: 241 HSLKELYLNRN 251
           H+L  L L RN
Sbjct: 278 HNLTSLDLRRN 288



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 4/162 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L+ L L    I  +P +I  L  L  L L G + +++LP  I+ L  L +L+LS
Sbjct: 136 IAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLNLNGNR-ITTLPDAIAKLHNLTSLDLS 194

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +++   P  +A + +L+ L L    I  +P +I  L  L  L L+  + +  LP +I 
Sbjct: 195 G-NRITTLPDAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNR-ITTLPDAIA 252

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
            L++L TL+L G  ++  +PD + ++ +L  LD+    I +P
Sbjct: 253 KLQNLSTLDLRGN-EITTLPDAIAQLHNLTSLDLRRNPIEKP 293


>gi|297813335|ref|XP_002874551.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297320388|gb|EFH50810.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 159/369 (43%), Gaps = 57/369 (15%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           + T++ ++P  +   + L LL L  C +L  LP +I +   L++L L+GCS L K P  +
Sbjct: 164 ESTNLKKLPD-LSTASNLILLYLNECTSLVELPSSIGNAINLKSLYLTGCSGLVKLPSSI 222

Query: 73  ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            +  +L  LY    +S+ E+P SI     L  LYL  C ++V LPSSI  L  L  LNL 
Sbjct: 223 GNATNLQNLYCHNCSSLVELPFSIGNATNLRCLYLVNCSSMVELPSSIGNLHQLVELNLK 282

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
           GC KLE +P  +  +ESL  LD++   + +    I    N++ L                
Sbjct: 283 GCSKLEVLPTKIN-LESLYILDLTDCLMFKSFPEI--STNIKVL---------------- 323

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL-HSL---KELY 247
                L+G +   V L +   + +C L           E +   ++  L H+L     LY
Sbjct: 324 ----KLMGTAIKEVPLSIKLWSRLCDL-----------EMSYNENLKELPHALGIITTLY 368

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL 307
           +       +P  +     L EL+L  CK+L SLPQ+  +L ++    C SL  L  +   
Sbjct: 369 IKNTEMREIPLWVKKSSCLRELKLIGCKKLVSLPQLSDSLLYLEVENCESLERLDCSFNN 428

Query: 308 CRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ- 366
            +      NCI   K  R   L I     Y               V P  ++P  F Y+ 
Sbjct: 429 PKISLKFFNCIKLNKEAR--DLIIKTSTNY--------------AVLPSREVPANFTYRA 472

Query: 367 NEGSSITVT 375
           N  S +T++
Sbjct: 473 NTRSFMTIS 481



 Score = 45.8 bits (107), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 2/172 (1%)

Query: 634 QTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKN 693
           + ++R    E  N  +L + +     I+  L++ T + EL  +I     L  L L GC  
Sbjct: 155 RNLKRMDLSESTNLKKLPDLSTASNLILLYLNECTSLVELPSSIGNAINLKSLYLTGCSG 214

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLS 752
           L +LP +I     L  L     S   E P    +   L  ++L   +++  LP+SI  L 
Sbjct: 215 LVKLPSSIGNATNLQNLYCHNCSSLVELPFSIGNATNLRCLYLVNCSSMVELPSSIGNLH 274

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
             +  NLK C  L+ LP+ IN L SL ++  + C   K+  E    ++ L++
Sbjct: 275 QLVELNLKGCSKLEVLPTKIN-LESLYILDLTDCLMFKSFPEISTNIKVLKL 325



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 11/125 (8%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L++   K L++L      L+ L  ++LS  +  ++ P+++++ + +L    E T++ 
Sbjct: 134 LVELSMRDSK-LQKLWEGNRPLRNLKRMDLSESTNLKKLPDLSTASNLILLYLNECTSLV 192

Query: 743 GLPASIELLSGNILSNLKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
            LP+SI    GN + NLK      C  L  LPS+I    +L+ +Y   CS L  +  ++G
Sbjct: 193 ELPSSI----GNAI-NLKSLYLTGCSGLVKLPSSIGNATNLQNLYCHNCSSLVELPFSIG 247

Query: 798 KVESL 802
              +L
Sbjct: 248 NATNL 252


>gi|15222556|ref|NP_176571.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325008|gb|AAG52450.1|AC010852_7 putative disease resistance protein; 28811-33581 [Arabidopsis
           thaliana]
 gi|332196041|gb|AEE34162.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1031

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 165/388 (42%), Gaps = 101/388 (26%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +LY+  + + ++    + LT L+ + L   ++L  LP  +S+   L  ++LS C    
Sbjct: 603 LVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELP-DLSNATNLERMDLSYCE--- 658

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                               S+ E+PSS   L  LE L +N C NL  +P+ +N L SL+
Sbjct: 659 --------------------SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-LASLE 697

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           T+N+ GC +L N+P       ++ +L VS TA+     SI     L  L  S   +    
Sbjct: 698 TVNMRGCSRLRNIPVM---STNITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGK---- 750

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                     L G +  P+           SL +LDL D         SDI+        
Sbjct: 751 ----------LKGITHLPI-----------SLKQLDLID---------SDIE-------- 772

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
                   T+P  I  L  L  L L  C+RL SLP++P +L+F+ A+ C SL T+F  L 
Sbjct: 773 --------TIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLN 824

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             +++    NC    KL ++   AI           V       + + PG ++P  F +Q
Sbjct: 825 TPKAELNFTNC---FKLGQQAQRAI-----------VQRSLLLGTTLLPGRELPAEFDHQ 870

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAICCV 394
            +G+++T+ RP          GF +C V
Sbjct: 871 GKGNTLTI-RPG--------TGFVVCIV 889



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 47/202 (23%)

Query: 656 EFPDIVQVLSDGTDIRELSLA-----IEL------LFGLVQLTLNGCKNLERLPRTISAL 704
           E PD    LS+ T++  + L+     +E+      L  L  L +N C NL+ +P  ++ L
Sbjct: 639 ELPD----LSNATNLERMDLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-L 693

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI------ELLSGNILSN 758
             L T+N+ G S+ R  P ++++  QL   ++  TA+ G+P SI      E LS +    
Sbjct: 694 ASLETVNMRGCSRLRNIPVMSTNITQL---YVSRTAVEGMPPSIRFCSRLERLSISSSGK 750

Query: 759 LKDCKNL--------------KSLPSTINGLRSLRMMYPSGCSKLKNVTE--------TL 796
           LK   +L              +++P  I  L  L ++  SGC +L ++ E          
Sbjct: 751 LKGITHLPISLKQLDLIDSDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMA 810

Query: 797 GKVESLEVRLSSWNRPKMQNDF 818
              ESLE      N PK + +F
Sbjct: 811 DDCESLETVFCPLNTPKAELNF 832


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 19/318 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L++LYL    +  +P  I  L  +E L+L   + L++LP  I  LK LR L+L+
Sbjct: 59  IGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQ-LTTLPKDIGKLKKLRELDLT 117

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + L   P+ +  +++L +L L    +  +P  I  L  L  LYL+  + L  LP  I 
Sbjct: 118 N-NLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQ-LKTLPKDIG 175

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L++L+ L L G  +L+ +P  +GK+++L EL+++   +      I  +KNL  L    +
Sbjct: 176 QLQNLRELYLDGN-QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINN 234

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L  + LG     +   LP+  G + SL +L+LS   +    +P DI
Sbjct: 235 ELTTLPKEIGKLKNLQVSYLG----ALLTTLPNDIGYLKSLRELNLSGNQI--TTLPKDI 288

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR-----A 292
             L +L+ LYL+ N   TLP  I  L NL EL+L    ++ +LP+    LQ +R      
Sbjct: 289 GQLQNLQVLYLSENQLATLPKEIGQLQNLRELDL-SGNQITTLPKDIGELQSLRELNLSG 347

Query: 293 NGCSSLVTLFGALKLCRS 310
           N  ++L    G L+  R 
Sbjct: 348 NLLTTLPKDIGKLQSLRE 365



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 130/275 (47%), Gaps = 32/275 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYLD   +  +P  I  L  L  L L G + L +LP  I  L+ L  L L+
Sbjct: 151 IGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQ-LKTLPKDIGKLQNLTELNLT 209

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + L   P+ + ++++L +L L    +  +P  I  L  L++ YL     L  LP+ I 
Sbjct: 210 N-NPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGAL--LTTLPNDIG 266

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LKSL+ LNLSG  ++  +P  +G++++L+ L +S   +      I  ++NLR L  SG 
Sbjct: 267 YLKSLRELNLSGN-QITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 325

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                                       LP   G + SL +L+LS   L    +P DI  
Sbjct: 326 Q------------------------ITTLPKDIGELQSLRELNLSGNLL--TTLPKDIGK 359

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           L SL+EL L  N   T+P  I  L NL+ L L+D 
Sbjct: 360 LQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDI 394



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 114/270 (42%), Gaps = 62/270 (22%)

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P+ +  +++L++LYL    +  +P  I  L  +E L L+  + L  LP  I  LK L+ 
Sbjct: 55  LPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQ-LTTLPKDIGKLKKLRE 113

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           L+L+    L  +P  +G++++L ELD++   ++     I  ++NLR LY           
Sbjct: 114 LDLTNNL-LTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDN-------- 164

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                   N L                                  +P DI  L +L+ELY
Sbjct: 165 --------NQL--------------------------------KTLPKDIGQLQNLRELY 184

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLF 302
           L+ N   TLP  I  L NL EL L +   L +LP+   NL+      +  N  ++L    
Sbjct: 185 LDGNQLKTLPKDIGKLQNLTELNLTNNP-LTTLPKDIGNLKNLGELLLINNELTTLPKEI 243

Query: 303 GALKLCRSKY------TIINCIDSLKLLRK 326
           G LK  +  Y      T+ N I  LK LR+
Sbjct: 244 GKLKNLQVSYLGALLTTLPNDIGYLKSLRE 273



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 34/191 (17%)

Query: 652 EEADEFPDIVQVLSDGTDIRELSL--------AIELLFGLVQLTLNGCKNLERLPRTISA 703
           +E   + ++ + L + TD+R LSL         I  L  L +L L+  + L+ LP+ I  
Sbjct: 26  QEIGTYHNLTEALQNPTDVRILSLHNNETLPKEIGELQNLTELYLSSNQ-LKTLPKEIGK 84

Query: 704 LKYLSTLNLSG------------LSKFRE----------FPEITSSRDQLLEIHLEGTAI 741
           L+ +  L+LS             L K RE           P+       L E+ L    +
Sbjct: 85  LQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQL 144

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP  I  L  N+     D   LK+LP  I  L++LR +Y  G ++LK + + +GK+++
Sbjct: 145 KTLPKDIGQLQ-NLRELYLDNNQLKTLPKDIGQLQNLRELYLDG-NQLKTLPKDIGKLQN 202

Query: 802 LEVRLSSWNRP 812
           L   L+  N P
Sbjct: 203 L-TELNLTNNP 212


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 150/311 (48%), Gaps = 28/311 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +     L +L+L G  +T VP  I  LT L  L L G   L+SLP  I  L  L  L L+
Sbjct: 93  IGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHL-GSNQLTSLPAEIGQLTALTELNLT 151

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L KL L    +  VP+    L  L  LYL++ + L  +P+ I 
Sbjct: 152 E-NQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNR-LTSVPADIG 209

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL  L L G  +L +VP  +G++ SLE L +S   +    + I  +++L  L  SG 
Sbjct: 210 QLTSLTWLGLYGN-QLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGN 268

Query: 181 NEPPA-------SASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
                       +A   L+L +N L          LP+  G + SL KL L D  L   +
Sbjct: 269 QLTSVPLEIGQLTAMTELYLSYNQLTS--------LPAEIGQLTSLEKLYLGDNRL--TS 318

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP----QIPPNLQ 288
           +P++I  L SL  LYLN N   ++PA I  L +LE  +LE   +L SLP    Q+   ++
Sbjct: 319 VPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLER-NQLTSLPTEVGQLTSLVE 377

Query: 289 F-VRANGCSSL 298
           F +R+N  +S+
Sbjct: 378 FRLRSNQLTSV 388



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L L G  +T VP+ I  LT LE L L G + L+S+P  I     L  L L 
Sbjct: 47  IGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGNR-LTSVPAEIGQFAALIELWLW 105

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +KL   P+ +  +  L+ L+L    +  +P+ I  L  L  L L E + L  +P+ I 
Sbjct: 106 G-NKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQ-LTNVPAEIG 163

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL  LNL+   +L NVP    ++ SL EL +    +    + I  + +L  L   G 
Sbjct: 164 QLTSLVKLNLTKN-QLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGN 222

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                 A         LL  SS  +  +   +  + SL +LDLS   L   ++P +I  L
Sbjct: 223 QLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQL--TSVPLEIGQL 280

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            ++ ELYL+ N   +LPA I  L +LE+L L D  RL S+P
Sbjct: 281 TAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGD-NRLTSVP 320



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
           + +L L+DCGL   A+P+++  L +L+EL + RN    LPA I  L +L EL
Sbjct: 6   VVELALADCGL-TGAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLREL 56


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 142/306 (46%), Gaps = 18/306 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +  +P  IE L  L+ L L G   L +LP  +  LK L+ L+L 
Sbjct: 86  IGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDL-GDNKLKALPYEVEELKNLQHLDL- 143

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++ + FP ++  +++L +L L+       P  I  L  L++LYL   K L  LP  I 
Sbjct: 144 GYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNK-LKLLPDEIG 202

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            +K L+ L L    +LE+ P  + ++  L+ LD+         + I  +KNL+ L+ +  
Sbjct: 203 EMKELRELGLDD-NELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDN 261

Query: 181 N---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                P            NL G     +  + P +  + +L  L+L    L   ++P  I
Sbjct: 262 KLKLLPDEIGELENLRELNLRGNK---LETLPPVIGELENLYVLELYKNNL--ESLPDVI 316

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             L +L  L L  N   TLPA+I  L NL EL L D K L++LP     ++  + +G   
Sbjct: 317 GKLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNK-LETLP-----VEIEKLSGSLR 370

Query: 298 LVTLFG 303
           L+ L G
Sbjct: 371 LLNLMG 376



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 45/180 (25%)

Query: 143 LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS 202
           +G++ +LE+LD+ G  ++     I  +KNL+                HL L  N L   S
Sbjct: 63  IGRLVNLEKLDLKGNNLKALPPEIGELKNLQ----------------HLDLRNNKL--ES 104

Query: 203 CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
            P     P +  + +L  LDL D  L   A+P +++ L +L+ L L  N F + P  I  
Sbjct: 105 LP-----PEIEELKNLQHLDLGDNKL--KALPYEVEELKNLQHLDLGYNQFESFPTVIRK 157

Query: 263 LLNLEEL------------ELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRS 310
           L NLE L            E+ + K+LQ L        ++R N    L    G +K  R 
Sbjct: 158 LKNLERLILNNNKFGLFPIEIAELKKLQIL--------YLRGNKLKLLPDEIGEMKELRE 209



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 29/242 (11%)

Query: 109 CKNLVR-LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
           C+  +R + S I  L +L+ L+L G   L+ +P  +G++++L+ LD+    +      I 
Sbjct: 52  CRQGIRFIGSDIGRLVNLEKLDLKGN-NLKALPPEIGELKNLQHLDLRNNKLESLPPEIE 110

Query: 168 LMKNLRSLYFSGCNEPPA--------SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT 219
            +KNL+ L   G N+  A            HL L +N     S P       +  + +L 
Sbjct: 111 ELKNLQHLDL-GDNKLKALPYEVEELKNLQHLDLGYNQF--ESFPTV-----IRKLKNLE 162

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
           +L L++   G    P +I  L  L+ LYL  N    LP  I  +  L EL L+D + L+S
Sbjct: 163 RLILNNNKFG--LFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNE-LES 219

Query: 280 LPQIPPNLQFVRA-----NGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISML 334
            P +   L+ ++      N   S  T+   +KL   +Y  +N  + LKLL      +  L
Sbjct: 220 FPTVIAELRKLQTLDLGYNEFESFPTVI--VKLKNLQYLFLND-NKLKLLPDEIGELENL 276

Query: 335 RE 336
           RE
Sbjct: 277 RE 278



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 19/151 (12%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           NLE LP  I  LK L  LNL G +K    P        L E++L    +  LP  IE LS
Sbjct: 308 NLESLPDVIGKLKNLGMLNL-GNNKIETLPAAIGELQNLRELYLSDNKLETLPVEIEKLS 366

Query: 753 GNI-LSNL--KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE------TLGKVES-L 802
           G++ L NL   +   +     T+ G R LR ++        ++ E      ++G V S L
Sbjct: 367 GSLRLLNLMGNNMSEVGDGERTV-GRRELRAIFGDRVVLDNDIVEYEEDEISVGDVYSEL 425

Query: 803 EVRLSSWN-------RPKMQNDFDCVEQSAV 826
           + +   WN       RP+   +  C E+  V
Sbjct: 426 KSKPMHWNFEMLRTLRPQSVPELKCSEEELV 456


>gi|167999915|ref|XP_001752662.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696193|gb|EDQ82533.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 1/171 (0%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K+L+ LYL  + IT +P+ I  L  LE L+L GC  L  LP  +  L  LR L + 
Sbjct: 141 IGNLKNLTHLYLGQSGITSLPAEIGKLCSLEDLSLTGCVRLEKLPPQVGQLTSLRRLNMG 200

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+ +K+ P  +  M  L KL L+  T++A +P  +  L  L+ L L+  K L  LP+ I
Sbjct: 201 SCTGIKELPSEIGGMVSLQKLVLNSCTALARLPDELFGLVNLQSLELDYMKLLAHLPAEI 260

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
             L+SL+ L+L+ C +L  +P  +G + +L+ L++ G    +P   + ++K
Sbjct: 261 GNLRSLQRLSLNCCTRLNRLPPEIGSLPALQVLNLVGCTGLKPELPMEILK 311



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 139/305 (45%), Gaps = 14/305 (4%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M+ L  L +      E+  +I+  + L+ LTL GC N+  +   I  L  L  L L GC+
Sbjct: 1   MERLKKLEMCILRAAEIDLTIKFPSQLKDLTLIGCNNMEVMHEHILQLTGLLELHLIGCN 60

Query: 64  KLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           KL       A M +L K  L+   SI  +  SI  L  +  L  + C N+  LP  +  +
Sbjct: 61  KLHDLTAEFAEMRNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGCTNIATLPPEVGNV 120

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           ++L  LNL  C  L  +P  +G +++L  L +  + I    + I  + +L  L  +GC  
Sbjct: 121 QTLLKLNLVLCKCLVRLPSEIGNLKNLTHLYLGQSGITSLPAEIGKLCSLEDLSLTGCVR 180

Query: 183 ----PPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
               PP             L   SC     LPS + G+ SL KL L+ C    A +P ++
Sbjct: 181 LEKLPPQVGQLT---SLRRLNMGSCTGIKELPSEIGGMVSLQKLVLNSCT-ALARLPDEL 236

Query: 238 DNLHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSL-PQIP--PNLQFVRAN 293
             L +L+ L L+    +  LPA I  L +L+ L L  C RL  L P+I   P LQ +   
Sbjct: 237 FGLVNLQSLELDYMKLLAHLPAEIGNLRSLQRLSLNCCTRLNRLPPEIGSLPALQVLNLV 296

Query: 294 GCSSL 298
           GC+ L
Sbjct: 297 GCTGL 301



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 2/176 (1%)

Query: 2   ASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           A M++L    L+   SI  +  SI  L  +  L   GC N+++LP  + +++ L  L L 
Sbjct: 70  AEMRNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGCTNIATLPPEVGNVQTLLKLNLV 129

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C  L + P  + ++++L+ LYL  + I  +P+ I  L  LE L L  C  L +LP  + 
Sbjct: 130 LCKCLVRLPSEIGNLKNLTHLYLGQSGITSLPAEIGKLCSLEDLSLTGCVRLEKLPPQVG 189

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSL 175
            L SL+ LN+  C  ++ +P  +G + SL++L + S TA+ R    +F + NL+SL
Sbjct: 190 QLTSLRRLNMGSCTGIKELPSEIGGMVSLQKLVLNSCTALARLPDELFGLVNLQSL 245



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 4/161 (2%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           C++L +   EF ++  +    L +   IR L  +I  L  + +L  +GC N+  LP  + 
Sbjct: 59  CNKLHDLTAEFAEMRNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGCTNIATLPPEVG 118

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            ++ L  LNL         P    +   L  ++L  + I  LPA I  L      +L  C
Sbjct: 119 NVQTLLKLNLVLCKCLVRLPSEIGNLKNLTHLYLGQSGITSLPAEIGKLCSLEDLSLTGC 178

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             L+ LP  +  L SLR +    C+ +K +   +G + SL+
Sbjct: 179 VRLEKLPPQVGQLTSLRRLNMGSCTGIKELPSEIGGMVSLQ 219



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 1/157 (0%)

Query: 649 RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           RL  E     ++  +    + I  L   I  L  L  L+L GC  LE+LP  +  L  L 
Sbjct: 136 RLPSEIGNLKNLTHLYLGQSGITSLPAEIGKLCSLEDLSLTGCVRLEKLPPQVGQLTSLR 195

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKS 767
            LN+   +  +E P        L ++ L   TA+  LP  +  L       L   K L  
Sbjct: 196 RLNMGSCTGIKELPSEIGGMVSLQKLVLNSCTALARLPDELFGLVNLQSLELDYMKLLAH 255

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           LP+ I  LRSL+ +  + C++L  +   +G + +L+V
Sbjct: 256 LPAEIGNLRSLQRLSLNCCTRLNRLPPEIGSLPALQV 292


>gi|357474807|ref|XP_003607689.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508744|gb|AES89886.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1043

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 183/411 (44%), Gaps = 52/411 (12%)

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            KNL+++P       +L+ L+L GC KL  +  +L  +  L  L++             L 
Sbjct: 637  KNLIKMPH-FGEFPNLERLDLEGCIKLVQLDPSLSLLTKLVYLNLKDCKCIIG----LLS 691

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-----LTGVCSLTKLDLS 224
             N R L     +    + S    L  N+L K S   +L  P+      + + SL +L+LS
Sbjct: 692  NNPRPLNIRASHSSSTTPS---SLKRNMLPKHS---SLQTPTTHTNLFSSLHSLCELNLS 745

Query: 225  DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
             C L +  IP+ I  L+ L+ L L  NNFVT+P S+  L  L  L LE CK L+SLP +P
Sbjct: 746  FCNLLQ--IPNAIGCLYWLEALNLGGNNFVTVP-SLRELSKLVYLSLEHCKLLKSLPVLP 802

Query: 285  PNLQF--------VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE 336
                         + A G    + LF           I NC    +  R + +  S + +
Sbjct: 803  SPTAIEHDLYKNNLPAFGTRWPIGLF-----------IFNCPKLGETERWSSMTFSWMIQ 851

Query: 337  YLEL--QAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLY-NVNKVVGFAICC 393
            +++   Q   D   ++ IV PGS++P WF  Q++G+ I +     ++ N N +VG   C 
Sbjct: 852  FIQANRQFSHDSSDRVQIVTPGSEMPSWFNNQSKGNLIRIDSSPIMHDNNNNIVGCVCCV 911

Query: 394  VFQVPKHSTGTYLFHSYPAHE----LECS------MDGSGEGHYIYFRGKFGHVVSDHLW 443
            VF +   S  T +  S P+ +    LE +      ++ S  G  +    +     S+H+W
Sbjct: 912  VFSMTPRSHPT-MRRSSPSRQTYLGLEFTDTHGRVIEKSNTGIQVTLNDRLITAKSNHIW 970

Query: 444  LLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDET 494
            L + P    +      L   + R  +D   +VK CG+  +Y  +++EF+ T
Sbjct: 971  LTYFPLDLSSDLLNRTLWVDTSRYENDLKIEVKNCGYRWVYKQDLQEFNLT 1021


>gi|357153349|ref|XP_003576423.1| PREDICTED: uncharacterized protein LOC100836991 [Brachypodium
           distachyon]
          Length = 1651

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 142/313 (45%), Gaps = 45/313 (14%)

Query: 26  LLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG 85
           LLT    L  +  +++         LK LR L LSG S + + P  V  ++ L  L +  
Sbjct: 548 LLTRARALHFRNTESIKLHTEAFKLLKHLRVLNLSG-SCIGEIPASVGHLKHLRYLDISD 606

Query: 86  TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
             I  +PSS+ +L  LE L L+   +L  LPS I  L++LK LNL GC  L+N+P  LG 
Sbjct: 607 LKIQTLPSSMSMLTKLEALDLSNT-SLRELPSFIGTLQNLKYLNLQGCHILQNLPPILGH 665

Query: 146 VESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
           + +LE L +S    +     S+  ++ LR L  S C E P                    
Sbjct: 666 LRTLEHLRLSCCYDVNELADSLCNLQGLRFLDLSSCTELP-------------------- 705

Query: 205 VALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN---FVTLPASI 260
               LP L G + +L  L+LS C      +P    NL  L+  YLN ++    + LP S+
Sbjct: 706 ---QLPPLFGDLTNLEDLNLSGC-FSIKQLPESFGNLCFLR--YLNISSCYELLQLPESL 759

Query: 261 SGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVT---------LFGALKLC 308
             L+ LE L L  C+RLQSLP    N+Q +R     GC +L            +  L+ C
Sbjct: 760 GNLMKLEVLILRRCRRLQSLPPSFWNIQDLRILDLAGCEALHVSTEMLTTNLQYLNLQQC 819

Query: 309 RSKYTIINCIDSL 321
           R  +T  NC  + 
Sbjct: 820 RKLHTQPNCFKNF 832



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 143/307 (46%), Gaps = 25/307 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M+ +  L  L L  TS+ E+PS I  L  L+ L L+GC  L +LP  +  L+ L  L LS
Sbjct: 616 MSMLTKLEALDLSNTSLRELPSFIGTLQNLKYLNLQGCHILQNLPPILGHLRTLEHLRLS 675

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL---LPGLELLYLNECKNLVRLPS 117
            C  + +    + +++ L   +LD +S  E+P    L   L  LE L L+ C ++ +LP 
Sbjct: 676 CCYDVNELADSLCNLQGLR--FLDLSSCTELPQLPPLFGDLTNLEDLNLSGCFSIKQLPE 733

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS---SIFLMKNLRS 174
           S   L  L+ LN+S C +L  +P++LG +  LE L +     RR  S   S + +++LR 
Sbjct: 734 SFGNLCFLRYLNISSCYELLQLPESLGNLMKLEVLILR--RCRRLQSLPPSFWNIQDLRI 791

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDC--GLGEA 231
           L  +GC     S    L      L    C      P+       LT L+LS+C       
Sbjct: 792 LDLAGCEALHVSTEM-LTTNLQYLNLQQCRKLHTQPNCFKNFTKLTFLNLSECHPNTDYL 850

Query: 232 AIPS---DIDNLHSLKEL----YLN-RNNFVTLPASISGLLNLEELELEDCKRLQ---SL 280
           ++P    +ID+  SL  L    YLN     + +P S   L  L  L+L  C  +     +
Sbjct: 851 SLPDCLPNIDHFQSLGYLINLEYLNLSQTILEIPVSFERLQKLHTLDLTGCVLMHPTSGI 910

Query: 281 PQIPPNL 287
           PQI P++
Sbjct: 911 PQILPDM 917



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           A +LL  L  L L+G   +  +P ++  LK+L  L++S L K +  P   S   +L  + 
Sbjct: 569 AFKLLKHLRVLNLSG-SCIGEIPASVGHLKHLRYLDISDL-KIQTLPSSMSMLTKLEALD 626

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           L  T++R LP+ I  L      NL+ C  L++LP  +  LR+L  +  S C  +  + ++
Sbjct: 627 LSNTSLRELPSFIGTLQNLKYLNLQGCHILQNLPPILGHLRTLEHLRLSCCYDVNELADS 686

Query: 796 LGKVESL 802
           L  ++ L
Sbjct: 687 LCNLQGL 693



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           D+ EL+ ++  L GL  L L+ C  L +LP     L  L  LNLSG    ++ PE   + 
Sbjct: 679 DVNELADSLCNLQGLRFLDLSSCTELPQLPPLFGDLTNLEDLNLSGCFSIKQLPESFGNL 738

Query: 729 DQLLEIHLEG-TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYP 783
             L  +++     +  LP S+    GN++      L+ C+ L+SLP +   ++ LR++  
Sbjct: 739 CFLRYLNISSCYELLQLPESL----GNLMKLEVLILRRCRRLQSLPPSFWNIQDLRILDL 794

Query: 784 SGCSKLKNVTETL 796
           +GC  L   TE L
Sbjct: 795 AGCEALHVSTEML 807



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 1/138 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +REL   I  L  L  L L GC  L+ LP  +  L+ L  L LS      E  +   +
Sbjct: 630 TSLRELPSFIGTLQNLKYLNLQGCHILQNLPPILGHLRTLEHLRLSCCYDVNELADSLCN 689

Query: 728 RDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
              L  + L   T +  LP     L+     NL  C ++K LP +   L  LR +  S C
Sbjct: 690 LQGLRFLDLSSCTELPQLPPLFGDLTNLEDLNLSGCFSIKQLPESFGNLCFLRYLNISSC 749

Query: 787 SKLKNVTETLGKVESLEV 804
            +L  + E+LG +  LEV
Sbjct: 750 YELLQLPESLGNLMKLEV 767


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTL----------------------KGC 38
           + +++ L++LY++G ++T +P  I  L  +++L L                         
Sbjct: 484 LCALQQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMAS 543

Query: 39  KNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
             L+S+P  IS LK ++ L L   +K+KK P  + +++ L++LY++G ++  +P  I  L
Sbjct: 544 NALTSIPDEISKLKSMKILNLDN-NKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKL 602

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             +E L L+  K + ++P S+  L+ L  LN+     L +VPD +GK++S++ L++S   
Sbjct: 603 KSMETLNLSFNK-IEKIPDSLCALEQLTELNMRSNA-LTSVPDEIGKLKSMKTLNLSSNK 660

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           I +  +S+  +  L  L                     +L   +  +  +  SL  +  L
Sbjct: 661 IEKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQL 720

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
           T+LD+    L   +IP +I  L S+K L L+ N    +P S+  L  L +L +E
Sbjct: 721 TELDIRSNAL--TSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNME 772



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 158/307 (51%), Gaps = 34/307 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLK-----GCKNLSSLPVTISSLKCLR 55
           ++ +K ++ L LD   + ++P S+  L  L  L +          L+S+P  IS LK ++
Sbjct: 409 ISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLKSMK 468

Query: 56  TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL--LYLNECKNLV 113
            L L   +K+KK P  + +++ L++LY++G ++  +P  I  L  +++  LY N+   + 
Sbjct: 469 ILNLDN-NKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKILNLYFNK---ID 524

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
           ++P S+  L+ L  LN++    L ++PD + K++S++ L++    +++  +S+  ++ L 
Sbjct: 525 KIPDSLCALEKLTELNMASNA-LTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLT 583

Query: 174 SLYFSGC------NEPPASASWH-LHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSD 225
            LY +G       +E     S   L+L FN + K        +P SL  +  LT+L++  
Sbjct: 584 ELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEK--------IPDSLCALEQLTELNMRS 635

Query: 226 CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
             L   ++P +I  L S+K L L+ N    +PAS+  L  L EL +    R  +L  IP 
Sbjct: 636 NAL--TSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIM----RSNALTAIPD 689

Query: 286 NLQFVRA 292
            +  +++
Sbjct: 690 EISKLKS 696



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 8/273 (2%)

Query: 22  SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKL 81
           S + L   L +L LK  + L+ +P  I     L+ L+LS  +K+ K P+ + ++E L++L
Sbjct: 200 SRLGLYKDLRILNLKHSE-LTIVPSEIGECHELQKLDLS-FNKISKIPESLYALEQLTEL 257

Query: 82  YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
            +   ++  VP  I  L  ++ L L+  K + ++P+S+  L+ L  LN+ G   L ++PD
Sbjct: 258 NMRSNALTSVPDEIGKLKSMKTLNLSSNK-IEKIPASLCALEKLTELNM-GSNALTSIPD 315

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
            +GK++S+E LD+S   I +   S+  ++ L  LY +                   L  S
Sbjct: 316 EIGKLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLS 375

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
           S  +  +  SL  +  LT+LD+    L   AIP +I  L S+  L L+ N    +P S+ 
Sbjct: 376 SNKIEKIPASLCTLEQLTELDMKYNAL--TAIPDEISKLKSMNILNLDNNKMEKIPDSLC 433

Query: 262 GLLNLEELELEDCKRLQS--LPQIPPNLQFVRA 292
            L  L EL++ D   + S  L  IP  +  +++
Sbjct: 434 ALQQLTELDMNDXXXMASNALTSIPDEISKLKS 466



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 160/321 (49%), Gaps = 26/321 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L++LY++  ++T VP  I  L  ++ L L   K +  +P ++ +L+ L  L++ 
Sbjct: 340 LCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNK-IEKIPASLCTLEQLTELDMK 398

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNE-----CKNLVRL 115
             + L   P  ++ ++ ++ L LD   + ++P S+  L  L  L +N+        L  +
Sbjct: 399 -YNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDXXXMASNALTSI 457

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR-- 173
           P  I+ LKS+K LNL    K++ +P +L  ++ L EL ++G A+      I  +K+++  
Sbjct: 458 PDEISKLKSMKILNLDN-NKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKIL 516

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           +LYF+  ++ P S      L    L  +S  +  +   ++ + S+  L+L +  + +  I
Sbjct: 517 NLYFNKIDKIPDSLCALEKLTE--LNMASNALTSIPDEISKLKSMKILNLDNNKMKK--I 572

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL----QF 289
           P+ +  L  L ELY+N N   ++P  I  L ++E L L        + +IP +L    Q 
Sbjct: 573 PASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLS----FNKIEKIPDSLCALEQL 628

Query: 290 ----VRANGCSSLVTLFGALK 306
               +R+N  +S+    G LK
Sbjct: 629 TELNMRSNALTSVPDEIGKLK 649



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 89/167 (53%), Gaps = 8/167 (4%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D   ++++  ++  L  L +L +NG   L  +P  IS LK +  LNL   +K  + P+  
Sbjct: 473 DNNKMKKIPASLCALQQLTELYMNG-NALTSIPDEISKLKSMKILNLY-FNKIDKIPDSL 530

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            + ++L E+++   A+  +P  I  L    + NL D   +K +P+++  L+ L  +Y +G
Sbjct: 531 CALEKLTELNMASNALTSIPDEISKLKSMKILNL-DNNKMKKIPASLCALQQLTELYMNG 589

Query: 786 CSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKL 832
            + L ++ + +GK++S+E    S+N+ +   D  C    A+E +T+L
Sbjct: 590 -NALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLC----ALEQLTEL 631



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 28/218 (12%)

Query: 48   ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
            + S K LR L L    +L   P  +     L KL L    IA++P S+  L  L  + + 
Sbjct: 928  LGSYKHLRMLNLEH-GELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMG 986

Query: 108  ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
                L  +P  I+ LKS+KTLNLS   K+  +PD+L  +E L  L+++G A+    ++I 
Sbjct: 987  S-NALTSIPDEISKLKSMKTLNLS-FNKIAKIPDSLCALEQLRILNMNGNAL----TAI- 1039

Query: 168  LMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG 227
                            P+    H  L  +  G S   +   +        L +L L+D  
Sbjct: 1040 ----------------PSVKLQHQTLDIDN-GASVFSLCFGMSERIKKLKLIRLQLNDNK 1082

Query: 228  LGEAAIP-SDIDNLHSLKELYLNRNNFVTLPASISGLL 264
            L E   P   I+ LHSL +L L  N   T+P  I  LL
Sbjct: 1083 LKE--FPWQIIEELHSLYKLSLCGNELQTVPDHIGRLL 1118



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 36/301 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++ +K +  L LD   + ++P S+  L  L  L ++    L+S+P  I  LK ++ L L 
Sbjct: 691 ISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRS-NALTSIPDEIGKLKSMKILNLD 749

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI- 119
             +K++K P  + ++E L+ L ++  ++  +P  I  L  +  L L+  K + ++P S+ 
Sbjct: 750 N-NKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNK-IEKIPDSLC 807

Query: 120 NGLKSLKTLNLS-GCCKLENVPDTLGKVESLEELDVSGTAIR---------------RPT 163
            G+K LK ++L     KL+  P  + +   L EL + G  ++               R  
Sbjct: 808 AGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHPCRKC 867

Query: 164 SSIFLMKNLRS-LYFS-----------GCNEPPASASWHLHLPFNLLGKSSCPVALMLPS 211
             + LM   ++ +YF            G     ++     H+   L        ++ L  
Sbjct: 868 KHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLSR 927

Query: 212 LTGVCSLTKLDLSDCGLGEAAI-PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELE 270
           L     L  L+L     GE  I PS+I   H L++L L+ N    +P S+  L  L E+ 
Sbjct: 928 LGSYKHLRMLNLEH---GELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEIN 984

Query: 271 L 271
           +
Sbjct: 985 M 985



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L  L L    I ++P S+  L  L  + + G   L+S+P  IS LK ++TL LS  +K+ 
Sbjct: 957  LQKLELSFNKIAKIPDSLCALEKLTEINM-GSNALTSIPDEISKLKSMKTLNLS-FNKIA 1014

Query: 67   KFPQIVASMEDLSKLYLDGTSIAEVPS 93
            K P  + ++E L  L ++G ++  +PS
Sbjct: 1015 KIPDSLCALEQLRILNMNGNALTAIPS 1041


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 23/316 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  L + GTS+  +P SI  L+ L+ L + G + L  LP +I  L  L+ L++S
Sbjct: 239 IGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTR-LQILPDSIVQLSSLQHLDVS 297

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             S +   P  +  + +L  L +  TS+  +P SI  L  L+ L +++  +L  LP +I 
Sbjct: 298 DTS-INNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDA-SLNTLPETIW 355

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ LNLSG   L  +P+ L ++ SL++L++SGT +     +I  + +L+ L  SG 
Sbjct: 356 RLSSLQDLNLSGTG-LTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGT 414

Query: 181 ---NEPPASASWHLHLPFNLLGK--SSCPVALMLPSLTGVCSLTKL-DLSDCGLGEAAIP 234
                P A    +     NL G   ++ P A        +C L  L DL+  G G   +P
Sbjct: 415 GLTTLPEAICQLNSLQDLNLSGTGLTTLPEA--------ICQLNSLQDLNLSGTGLTTLP 466

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVR 291
             I  L+SL++L L+     TLP +I  L NL  L +     L +LP       NL+F+ 
Sbjct: 467 GAICQLNSLQDLNLSGTGLTTLPETIGQLTNLNNL-MASNTALTTLPDTLGQLSNLEFLN 525

Query: 292 ANGCSSLVTLFGALKL 307
            +  +SLVTL  ++ L
Sbjct: 526 ISN-TSLVTLPDSIGL 540



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 51/298 (17%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L + GTS+ ++P  I  L GL+ L +     L++LP +I  L  LR L++S  S   
Sbjct: 84  LETLNISGTSLKKLPEFIGELVGLQSLYVSRTA-LTTLPNSIRQLSNLRRLDIS-FSGFI 141

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P  +  M +L  L +  T +  +P+SI  L  L+ L ++    L  LP SI  L  LK
Sbjct: 142 NLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSST-GLTSLPDSIGQLSMLK 200

Query: 127 TLNLSGC----------------------CKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
            L++SG                         L  +PD++G++ SL+ LDVSGT+++    
Sbjct: 201 HLDVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPD 260

Query: 165 SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
           SI  + +L+ L  SG                         + ++  S+  + SL  LD+S
Sbjct: 261 SIGQLSSLQHLDVSGTR-----------------------LQILPDSIVQLSSLQHLDVS 297

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           D  +    +P  I  L +L+ L ++  +  TLP SI  L NL+ LE+ D   L +LP+
Sbjct: 298 DTSINN--LPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDAS-LNTLPE 352



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 6/260 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L DL L GT +T +P +I  L  L+ L L G   L++LP  I  L  L+ L LS
Sbjct: 377 LCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGT-GLTTLPEAICQLNSLQDLNLS 435

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G   L   P+ +  +  L  L L GT +  +P +I  L  L+ L L+    L  LP +I 
Sbjct: 436 GTG-LTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGT-GLTTLPETIG 493

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L  L ++    L  +PDTLG++ +LE L++S T++     SI L+ +L+ L+ S  
Sbjct: 494 QLTNLNNL-MASNTALTTLPDTLGQLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDT 552

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           +      S        +L  S+  +  +  S+  + +L  L++S+  L   ++P  I  L
Sbjct: 553 DLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNTDL--TSLPESIGQL 610

Query: 241 HSLKELYLNRNNFVTLPASI 260
            SL +L ++     +LP SI
Sbjct: 611 KSLIKLNVSNTGLTSLPMSI 630



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 7/281 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A  +  S L L    ++ +P  +  LT L+ LT+     ++ LP  +  L  L TL +S
Sbjct: 32  LAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTI-ASNPITILPKWLECLTGLETLNIS 90

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G S LKK P+ +  +  L  LY+  T++  +P+SI  L  L  L ++     + LP SI 
Sbjct: 91  GTS-LKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDIS-FSGFINLPDSIG 148

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            + +L+ LN+S    L  +P ++G++  L+ LDVS T +     SI  +  L+ L  SG 
Sbjct: 149 EMPNLQDLNVS-STDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGT 207

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           +      S         L  SS  +  +  S+  + SL  LD+S   L    +P  I  L
Sbjct: 208 DLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSL--QTLPDSIGQL 265

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            SL+ L ++      LP SI  L +L+ L++ D   + +LP
Sbjct: 266 SSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTS-INNLP 305



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           GT +  L  AI  L  L  L L+G   L  LP  I  L  L  LNLSG +     PE   
Sbjct: 390 GTGLTTLPEAICQLNSLQDLNLSGT-GLTTLPEAICQLNSLQDLNLSG-TGLTTLPEAIC 447

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK-DCKNLKSLPSTINGLRSLRMMYPSG 785
             + L +++L GT +  LP +I  L  N L +L      L +LP TI  L +L  +  S 
Sbjct: 448 QLNSLQDLNLSGTGLTTLPGAICQL--NSLQDLNLSGTGLTTLPETIGQLTNLNNLMASN 505

Query: 786 CSKLKNVTETLGKVESLE 803
            + L  + +TLG++ +LE
Sbjct: 506 TA-LTTLPDTLGQLSNLE 522


>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
 gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1124

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 35/300 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +AS+  L  L L    +T++P +I  LT L+ L L   K L+ LP  I+SL  L+ L+LS
Sbjct: 39  IASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNK-LTQLPEAIASLARLQRLDLS 97

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L + P+ +AS+  L +L L    + E+P +I  L  L+ L L+    L  LP +I 
Sbjct: 98  N-NQLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSN-NQLTELPEAIA 155

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L  L++ +LS   +L  +P++L ++  LE  D     +R+  S I  +K L+ LY    
Sbjct: 156 SLTQLQSFDLSHN-ELTELPNSLSRLLYLEIFDCGSNLLRQVPSVIKELKGLKELYIY-A 213

Query: 181 NEPPASASW--HLH------------------------LPFNLLGKSSC--PVALMLPSL 212
           N+     SW   LH                        L F +LG      P++ + P +
Sbjct: 214 NDLEVIPSWICDLHVLEILSIGGNQISELPKSLDKLQSLEFIILGADDGGNPLSKLPPCI 273

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
             +  + ++  ++C L    +P  ++    L+ELYL  N    LPAS+  L +L++++L+
Sbjct: 274 QRIKQIRRIWANNCEL--HFLPDWLNEFPQLEELYLGSNCLTDLPASLGQLPHLDDIQLD 331



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 26/148 (17%)

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           +L  +P+ +  +  L++LD+S   + +   +I  +  L++L  S                
Sbjct: 31  ELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSN--------------- 75

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
            N L  +  P A     +  +  L +LDLS+  L E  +P  I +L  L+EL L  N   
Sbjct: 76  -NKL--TQLPEA-----IASLARLQRLDLSNNQLTE--LPEAIASLAQLQELNLRNNQLT 125

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQ 282
            LP +I+ L  L+ L+L +  +L  LP+
Sbjct: 126 ELPEAIASLTRLQRLDLSN-NQLTELPE 152


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 153/313 (48%), Gaps = 22/313 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L +L L+    T +P  I  L  L+ L L   + L++LP  I +L+ L+TL+L+
Sbjct: 124 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNR-LTTLPKEIGNLQKLQTLDLA 182

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  P+ +  ++ L  L+L    +  +P  IE L  LE L+L   + L  LP  I 
Sbjct: 183 -QNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNE-LTTLPKEIG 240

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL----- 175
            L++L+ LNL+   +   +P+ +G ++ L++L ++ + +      I  ++NL+ L     
Sbjct: 241 NLQNLQELNLN-SNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSN 299

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
            F+   E   +      L  N    ++ P       +  +  L KL L+   L    +P 
Sbjct: 300 QFTTLPEEIGNLQKLQKLDLNYSQLTTLP-----KEIGKLQKLQKLSLAQNQL--KTLPK 352

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FV 290
           +I  L +LK L L+ N   TLP  I  L NL+EL+L    +L +LP+   NLQ     F+
Sbjct: 353 EIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDL-GGNQLTTLPEKIGNLQKLQELFL 411

Query: 291 RANGCSSLVTLFG 303
             N   +L    G
Sbjct: 412 AGNRLKTLPKEIG 424



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 55/270 (20%)

Query: 14  GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
           G  +T +P  I  L  L+ L L      ++LP  I +L+ L+TL+LS  ++L   P+ + 
Sbjct: 114 GNKLTTLPKEIGNLQNLQELNL-NSNQFTTLPEEIGNLQKLQTLDLS-HNRLTTLPKEIG 171

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +++ L  L L    +  +P  IE L  LE L+L   + L  LP  I  L+ L+ L+L G 
Sbjct: 172 NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNE-LTTLPKEIEKLQKLEALHL-GN 229

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            +L  +P  +G +++L+EL                  NL S  F+               
Sbjct: 230 NELTTLPKEIGNLQNLQEL------------------NLNSNQFT--------------- 256

Query: 194 PFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                          LP   G +  L KL L+   L    +P +I NL +L+EL LN N 
Sbjct: 257 --------------TLPEEIGNLQKLQKLSLAHSRL--TTLPKEIGNLQNLQELNLNSNQ 300

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           F TLP  I  L  L++L+L +  +L +LP+
Sbjct: 301 FTTLPEEIGNLQKLQKLDL-NYSQLTTLPK 329



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 4/179 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L  L L+ + +T +P  I  L  L+ L+L     L +LP  I  L+ L+ L LS
Sbjct: 308 IGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSL-AQNQLKTLPKEIGKLQNLKNLSLS 366

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ + ++++L +L L G  +  +P  I  L  L+ L+L     L  LP  I 
Sbjct: 367 -HNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFL-AGNRLKTLPKEI- 423

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           G             +L  +P  +G ++SLE L++SG ++      I  ++ L+ LY  G
Sbjct: 424 GNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGG 482


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 137/281 (48%), Gaps = 33/281 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++++++L DLY   + +T VP+ I  LT LE L L  C  L+ +P  I  L  L  L L 
Sbjct: 26  LSALREL-DLY--NSQLTSVPAEIGQLTSLEKLNLY-CNQLTIVPAEIGQLALLERLRLG 81

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G SKL   P  +  +  L +L L G  +  VP+ I  L  LE L L  C  L  +P+ I 
Sbjct: 82  G-SKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLY-CNQLTIVPAEIG 139

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L  L+ LNL G  +L +VP  +G++ SL ELD+    +    + I+ + +L  L+  G 
Sbjct: 140 QLALLERLNLDG-NQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGN 198

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               +S P       +  + SL  LDL +  L   ++P++I  L
Sbjct: 199 Q------------------LTSVPA-----EIGQLASLKGLDLYNNQL--TSVPAEIGQL 233

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            SL++L L+ N   ++PA I  L +L E++L    RL S+P
Sbjct: 234 ASLEKLRLDNNQLASVPAEIGRLTSLTEVDL-SFNRLTSVP 273



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 33/295 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  L LD   +  VP+ I  LT L  + L     L+S+P  I  L  L  L L 
Sbjct: 230 IGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLS-FNRLTSVPAEIGQLTSLTELHLH 288

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL + P  +  +  L +L LD   +  VP+ I  L  LE L L     L  +P+ I 
Sbjct: 289 -INKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLG-GNQLTSVPAEIG 346

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ L L G  +L +VP  +G++ SLE L ++G  +    + I  + +L+ LY  G 
Sbjct: 347 QLASLERLLLYGN-QLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHG- 404

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           NE                  +S P       +  + SL +L L D  L    +P++I  L
Sbjct: 405 NE-----------------LTSVPA-----EIGQLTSLQRLYLGDNQL--TRVPAEIGQL 440

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGC 295
            SL  L LN N   +LPA I  L ++E L+L  C  L S   +P  ++ +RA  C
Sbjct: 441 TSLTVLGLNSNQLSSLPAEIGQLTSVERLDLR-CNELTS---VPAAIRELRAAPC 491



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 129/276 (46%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L++L L    +T +P+ I  LT L  L L+G   L+S+P  I  L  L+ L+L 
Sbjct: 161 IGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQG-NQLTSVPAEIGQLASLKGLDLY 219

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L KL LD   +A VP+ I  L  L  + L+    L  +P+ I 
Sbjct: 220 N-NQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLS-FNRLTSVPAEIG 277

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L SL  L+L    KL  VP  +G++ SL  L +    +    + I  + +L  L   G 
Sbjct: 278 QLTSLTELHLH-INKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGN 336

Query: 180 -CNEPPASASWHLHLPFNLL-GKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                PA       L   LL G     V   +  LT   SL  L L+   L   ++P++I
Sbjct: 337 QLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLT---SLEWLGLNGNIL--TSVPAEI 391

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L SLKELYL+ N   ++PA I  L +L+ L L D
Sbjct: 392 GQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGD 427



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 104/240 (43%), Gaps = 54/240 (22%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           ++P  I  L  LR L+L   S+L   P  +  +  L KL L    +  VP+ I  L  LE
Sbjct: 18  AVPAEIGRLSALRELDLYN-SQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLE 76

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
            L L   K L  +P+ I  L SL  LNL G  +L +VP  +G++ SLE+L+         
Sbjct: 77  RLRLGGSK-LTSVPAEIGQLTSLVELNLGGN-RLTSVPAEIGQLTSLEKLN--------- 125

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKL 221
                       LY   CN+                         ++P+  G +  L +L
Sbjct: 126 ------------LY---CNQ-----------------------LTIVPAEIGQLALLERL 147

Query: 222 DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           +L    L   ++P++I  L SL EL L RN   +LP  I  L +L  L L+   +L S+P
Sbjct: 148 NLDGNQL--TSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQG-NQLTSVP 204


>gi|168032282|ref|XP_001768648.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680147|gb|EDQ66586.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 313

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 133/290 (45%), Gaps = 52/290 (17%)

Query: 2   ASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            S+K L    L+   SI ++P +I  LT L+ + L GC N+++LP  I +L  L+ L LS
Sbjct: 39  GSLKSLCRFRLENCLSIRQLPKAIGQLTNLQEMDLSGCTNITTLPSEIGNLLGLQKLNLS 98

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C  L + P  + S+  L+   L  + I  +P  I  L  LE L+L  C  L +LP  I 
Sbjct: 99  RCKCLIRVPVELGSLTKLTTFNLSQSGITTLPQEIGKLRNLESLFLFGCSRLEKLPKDIG 158

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSLYFSG 179
            L SL  L+L  C  L+ +P  +GK+ESL++L + S T++ R    +F +  L++L    
Sbjct: 159 KLSSLLQLHLGSCTSLKEIPREIGKLESLQKLSLNSCTSLVRLPEEVFHIVTLQAL---- 214

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                                     DL  C L  A + S+I N
Sbjct: 215 ------------------------------------------DLDHCKL-LAHLSSEIRN 231

Query: 240 LHSLKELYLN-RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           L SL+ L LN       LP  I+ L +LE L L  C  L+  P++P +L+
Sbjct: 232 LKSLQRLSLNCCTRLNRLPLEIASLPSLEVLNLVGCTGLK--PELPKDLR 279



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 5/176 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S+  L+   L  + IT +P  I  L  LE L L GC  L  LP  I  L  L  L L 
Sbjct: 110 LGSLTKLTTFNLSQSGITTLPQEIGKLRNLESLFLFGCSRLEKLPKDIGKLSSLLQLHLG 169

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+ LK+ P+ +  +E L KL L+  TS+  +P  +  +  L+ L L+ CK L  L S I
Sbjct: 170 SCTSLKEIPREIGKLESLQKLSLNSCTSLVRLPEEVFHIVTLQALDLDHCKLLAHLSSEI 229

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
             LKSL+ L+L+ C +L  +P  +  + SLE L++ G    +P     L K+LR +
Sbjct: 230 RNLKSLQRLSLNCCTRLNRLPLEIASLPSLEVLNLVGCTGLKPE----LPKDLRKM 281



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 29/220 (13%)

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           ++ E+P +I +L  L  L+L  C  L  L      LKSL    L  C  +  +P  +G++
Sbjct: 6   NMDELPETILVLTSLLELHLISCNKLQDLTIGFGSLKSLCRFRLENCLSIRQLPKAIGQL 65

Query: 147 ESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
            +L+E+D+SG T I    S I  +  L+ L  S C                   K    V
Sbjct: 66  TNLQEMDLSGCTNITTLPSEIGNLLGLQKLNLSRC-------------------KCLIRV 106

Query: 206 ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLL 264
            + L SLT    LT  +LS  G+    +P +I  L +L+ L+L   +    LP  I  L 
Sbjct: 107 PVELGSLT---KLTTFNLSQSGI--TTLPQEIGKLRNLESLFLFGCSRLEKLPKDIGKLS 161

Query: 265 NLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSLVTL 301
           +L +L L  C  L+ +P+      +LQ +  N C+SLV L
Sbjct: 162 SLLQLHLGSCTSLKEIPREIGKLESLQKLSLNSCTSLVRL 201



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 64/140 (45%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L +   IR+L  AI  L  L ++ L+GC N+  LP  I  L  L  LNLS        P 
Sbjct: 49  LENCLSIRQLPKAIGQLTNLQEMDLSGCTNITTLPSEIGNLLGLQKLNLSRCKCLIRVPV 108

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
              S  +L   +L  + I  LP  I  L       L  C  L+ LP  I  L SL  ++ 
Sbjct: 109 ELGSLTKLTTFNLSQSGITTLPQEIGKLRNLESLFLFGCSRLEKLPKDIGKLSSLLQLHL 168

Query: 784 SGCSKLKNVTETLGKVESLE 803
             C+ LK +   +GK+ESL+
Sbjct: 169 GSCTSLKEIPREIGKLESLQ 188



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPA 746
           ++GC N++ LP TI  L  L  L+L   +K ++      S   L    LE   +IR LP 
Sbjct: 1   ISGCNNMDELPETILVLTSLLELHLISCNKLQDLTIGFGSLKSLCRFRLENCLSIRQLPK 60

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
           +I  L+     +L  C N+ +LPS I  L  L+ +  S C  L  V   LG +     +L
Sbjct: 61  AIGQLTNLQEMDLSGCTNITTLPSEIGNLLGLQKLNLSRCKCLIRVPVELGSL----TKL 116

Query: 807 SSWN 810
           +++N
Sbjct: 117 TTFN 120



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L  L L GC  LE+LP+ I  L  L  L+L   +  +E P      + L ++ L   
Sbjct: 136 LRNLESLFLFGCSRLEKLPKDIGKLSSLLQLHLGSCTSLKEIPREIGKLESLQKLSLNSC 195

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T++  LP  +  +      +L  CK L  L S I  L+SL+ +  + C++L  +   +  
Sbjct: 196 TSLVRLPEEVFHIVTLQALDLDHCKLLAHLSSEIRNLKSLQRLSLNCCTRLNRLPLEIAS 255

Query: 799 VESLEV 804
           + SLEV
Sbjct: 256 LPSLEV 261


>gi|418666318|ref|ZP_13227747.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410757932|gb|EKR19533.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 313

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 30/289 (10%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
            ++L  L LDG  +T +P  I  L  L +L L G +  +SLP  I  L+ L  L+L G +
Sbjct: 16  FQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQ-FTSLPKEIGQLQNLERLDLDG-N 73

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           +    P+ +  ++ L  L L G     +P  I  L  LE L L        LP  I  L+
Sbjct: 74  QFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDL-AGNQFTFLPKEIGQLQ 132

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            L+ LNL    +    P  + + +SL+ L +SG  ++     I L++NL+SL+  G    
Sbjct: 133 KLEALNLD-HNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQ-- 189

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                            +S P       +  + +L +L+L D  L    +P +I+ L +L
Sbjct: 190 ----------------LTSLP-----KEIGQLQNLFELNLQDNKL--KTLPKEIEQLQNL 226

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           + L+L+ N   +LP  I  L NL EL L+D K L++LP+    LQ ++ 
Sbjct: 227 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNK-LKTLPKEIEQLQNLQV 274



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 667 GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS 726
           G  ++ L   I LL  L  L L+G + L  LP+ I  L+ L  LNL   +K +  P+   
Sbjct: 164 GDQLKTLPKEILLLQNLQSLHLDGNQ-LTSLPKEIGQLQNLFELNLQD-NKLKTLPKEIE 221

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMM 781
               L  +HL+G  +  LP  I  L      NL+D K LK+LP  I  L++L+++
Sbjct: 222 QLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNK-LKTLPKEIEQLQNLQVL 275



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L    +  +P  IE L  L+ L L G + L+SLP  I  L+ L  L L 
Sbjct: 197 IGQLQNLFELNLQDNKLKTLPKEIEQLQNLQSLHLDGNQ-LTSLPKEIGQLQNLFELNLQ 255

Query: 61  GCSKLKKFPQIVASMEDLS--KLYLDGTSIAEVPSSIELLPGLELLYLNECK 110
             +KLK  P+ +  +++L   +LY +  S+ E     ELLP  E+ + +E K
Sbjct: 256 D-NKLKTLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLPNCEIDFESEGK 306



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           G   LE LPR I   + L  LNL G ++    P+       L  ++L G     LP  I 
Sbjct: 2   GLHELESLPRVIGLFQNLEKLNLDG-NQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEI- 59

Query: 750 LLSGNILSNLK----DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
                 L NL+    D     SLP  I  L+ LR++  +G ++  ++ + +G++++LE
Sbjct: 60  ----GQLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAG-NQFTSLPKEIGQLQNLE 112


>gi|357518005|ref|XP_003629291.1| Resistance protein [Medicago truncatula]
 gi|355523313|gb|AET03767.1| Resistance protein [Medicago truncatula]
          Length = 1039

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 159/383 (41%), Gaps = 85/383 (22%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI- 71
           D   +TE+P +  LL  LEL + K CKNL+++  ++  L+ L+ L   GC KL+KFP I 
Sbjct: 641 DAEFLTEIPDTSSLLN-LELFSFKRCKNLTTIHESVGFLEKLKVLSAQGCRKLRKFPPIK 699

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           + S+E+L+  +   T++   P  +  +  ++ L L E  +   +P+S   L  L+TL L 
Sbjct: 700 LISLEELNVSFC--TNLESFPEILGKMENMKNLVLEET-SFKEMPNSFQNLTHLQTLQLR 756

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            CC +  +P  +  +  L  +++ G                             S  W  
Sbjct: 757 -CCGVFKLPSCILTMPKL--VEIIGW---------------------------VSEGWQ- 785

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
              F    ++   V+ M+PS     ++  L L+ C L +  +P  +    ++KEL+L  N
Sbjct: 786 ---FPKSDEAEDKVSSMVPS-----NVESLRLTFCNLSDEFVPIILTWFVNVKELHLAHN 837

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
           NF  LP  I     L  L +++C  LQ +  I PNL+ + A GC SL             
Sbjct: 838 NFTILPECIKECHLLRVLCVDECHYLQEVRGIAPNLKILYARGCKSLTC----------- 886

Query: 312 YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
                                   E    Q + + G  +    P S+IP WF + +   S
Sbjct: 887 -----------------------TEMFMNQELHEAGSTM-FYLPRSRIPDWFEHCSSNGS 922

Query: 372 ITVTRPSYLYNVNKVVGFAICCV 394
                 S+ +  NK    A+C V
Sbjct: 923 ------SFFWFRNKFPAIALCLV 939


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T  P  I  L  L+ L L     + ++P  I  L+ L++L L 
Sbjct: 135 IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-SANQIKTIPKEIEKLQKLQSLYLP 193

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L L    I  +P  IE L  L+ LYL++ + L  LP  I 
Sbjct: 194 N-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQ-LTTLPQEIE 251

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L+ L++L L    +L  +P  +G++++L+ L ++   +      I  ++NL+ LY   +
Sbjct: 252 KLQKLESLGLDNN-QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 310

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +   +   LP   G + +L +L LS+  L    IP +I
Sbjct: 311 QLTTIPKEIGQLQNLQMLDLGNNQLTI---LPKEIGKLQNLQELYLSNNQL--TTIPKEI 365

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L +L+ELYL+ N   T+P  I  L NL+EL L +
Sbjct: 366 GQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN 401



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 29/273 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL    +T +P  I  L  L+ L L     + +LP  I  L+ L+ L L 
Sbjct: 181 IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNL-SYNQIKTLPQEIEKLQKLQWLYLH 239

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L LD   +  +P  I  L  L++L+LN  + L  +P  I 
Sbjct: 240 K-NQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQ-LTTIPQEIG 297

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P  +G++++L+ LD+    +      I  ++NL+ LY S  
Sbjct: 298 HLQNLQDLYLVSN-QLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNN 356

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               ++ P       +  + +L +L LS+  L    IP +I  L
Sbjct: 357 Q------------------LTTIP-----KEIGQLQNLQELYLSNNQL--TTIPKEIGQL 391

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +L+ELYL+ N  +T+P  I  L NL+ L L +
Sbjct: 392 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 424



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 39/159 (24%)

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+ +P  +G++++L+ LD+S   +      I  +KNL+ L  S                
Sbjct: 58  KLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQ------------- 104

Query: 195 FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                       ++LP  +  + +L  LDL    L    +P +I  L +L+ELYL+ N  
Sbjct: 105 -----------LIILPKEIRQLKNLQMLDLRSNQL--TILPKEIGKLQNLQELYLSNNQL 151

Query: 254 VTLPASISGLLNLEEL------------ELEDCKRLQSL 280
            T P  I  L  L+ L            E+E  ++LQSL
Sbjct: 152 TTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 190


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T  P  I  L  L+ L L     + ++P  I  L+ L++L L 
Sbjct: 115 IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-SANQIKTIPKEIEKLQKLQSLYLP 173

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L L    I  +P  IE L  L+ LYL++ + L  LP  I 
Sbjct: 174 N-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQ-LTTLPQEIE 231

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L+ L++L L    +L  +P  +G++++L+ L ++   +      I  ++NL+ LY   +
Sbjct: 232 KLQKLESLGLDNN-QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 290

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +   +   LP   G + +L +L LS+  L    IP +I
Sbjct: 291 QLTTIPKEIGQLQNLQMLDLGNNQLTI---LPKEIGKLQNLQELYLSNNQL--TTIPKEI 345

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L +L+ELYL+ N   T+P  I  L NL+EL L +
Sbjct: 346 GQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN 381



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 29/273 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL    +T +P  I  L  L+ L L     + +LP  I  L+ L+ L L 
Sbjct: 161 IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNL-SYNQIKTLPQEIEKLQKLQWLYLH 219

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L LD   +  +P  I  L  L++L+LN  + L  +P  I 
Sbjct: 220 K-NQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQ-LTTIPQEIG 277

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P  +G++++L+ LD+    +      I  ++NL+ LY S  
Sbjct: 278 HLQNLQDLYLVSN-QLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSN- 335

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                          N L  ++ P       +  + +L +L LS+  L    IP +I  L
Sbjct: 336 ---------------NQL--TTIP-----KEIGQLQNLQELYLSNNQL--TTIPKEIGQL 371

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +L+ELYL+ N  +T+P  I  L NL+ L L +
Sbjct: 372 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 404



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 47/185 (25%)

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+ +P  +G++++L+ LD+S   +      I  +KNL+ L  S                
Sbjct: 38  KLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQ------------- 84

Query: 195 FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                       ++LP  +  + +L  LDL    L    +P +I  L +L+ELYL+ N  
Sbjct: 85  -----------LIILPKEIRQLKNLQMLDLRSNQL--TILPKEIGKLQNLQELYLSNNQL 131

Query: 254 VTLPASISGLLNLEEL------------ELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            T P  I  L  L+ L            E+E  ++LQSL        ++  N  ++L   
Sbjct: 132 TTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL--------YLPNNQLTTLPQE 183

Query: 302 FGALK 306
            G L+
Sbjct: 184 IGKLQ 188


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 32/268 (11%)

Query: 39  KNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           + LSSLP TI     LR L L G   L++ P+ +  +++L  L L+ T I  +P+SI  L
Sbjct: 68  EELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQL 127

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L +L L  C+ L +LP  +  L++L+ LNLS   +LE +P ++G++++L+  D+S   
Sbjct: 128 QNLRILDLGNCQ-LQQLPEGLGQLQALEALNLS-ANQLEELPPSIGQLQALKMADLSSNR 185

Query: 159 IRRPTSSIFLMKNLRSLY-------FSGCNEPPASASWHLHLPFNLLGKSSCPVAL---- 207
           ++   +    +  L  L        F   N     A   L L  N L +   P +L    
Sbjct: 186 LQELPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQ--LPASLGQLK 243

Query: 208 -------------MLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
                         LP+  G + SL +LDLSD  L +  +P +I  L +LK L++  N  
Sbjct: 244 QLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQ--LPPEIGQLQALKSLFITENEL 301

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLP 281
             LPA  + L NL+EL+L++ K L +LP
Sbjct: 302 QQLPAEFAQLKNLQELQLQENK-LTALP 328



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 136/297 (45%), Gaps = 33/297 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L+ T I  +P+SI  L  L +L L  C+ L  LP  +  L+ L  L LS
Sbjct: 101 IGQLQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQ-LQQLPEGLGQLQALEALNLS 159

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L++ P  +  ++ L    L    + E+P+    L  LE L L E   L  LPS+  
Sbjct: 160 -ANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELAL-ENNLLSFLPSNFG 217

Query: 121 GLKSLKTLNLSGCC----------------------KLENVPDTLGKVESLEELDVSGTA 158
           GL +LKTL L+                          L  +P  +G+++SL ELD+S   
Sbjct: 218 GLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNF 277

Query: 159 IRRPTSSIFLMKNLRSLYFSG--CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
           +++    I  ++ L+SL+ +     + PA  +   +L    L ++       LP   G  
Sbjct: 278 LQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTA---LPRNFGKL 334

Query: 217 S-LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
           S L +L LS+  L   A+P  I  L  L  L L+ N     P + SG+ NL  L+LE
Sbjct: 335 SQLEELQLSENKL--EALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLE 389



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 8/154 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            A +K+L +L L    +T +P +   L+ LE L L   K L +LP +I  LK L +L LS
Sbjct: 308 FAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENK-LEALPKSIKRLKKLSSLNLS 366

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE--LLYLNECKNLVRLPSS 118
             +++  FP+  + +++L  L L+G  I E+P  I+ L  LE  +LY NE +N   LP  
Sbjct: 367 N-NEIYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRN---LPPY 422

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
           +  L +L+ L++S   + E  P+ L ++  L++L
Sbjct: 423 LQDLSALRRLDISD-NEFEAFPEVLYQMRQLKDL 455



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 3/133 (2%)

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELL 751
           + L  LP TI     L  L+L G     E PE       L  + L  T I+ LPASI  L
Sbjct: 68  EELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQL 127

Query: 752 SGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNR 811
               + +L +C+ L+ LP  +  L++L  +  S  ++L+ +  ++G++++L++   S NR
Sbjct: 128 QNLRILDLGNCQ-LQQLPEGLGQLQALEALNLS-ANQLEELPPSIGQLQALKMADLSSNR 185

Query: 812 -PKMQNDFDCVEQ 823
             ++ N+F  + Q
Sbjct: 186 LQELPNEFSQLTQ 198



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 11/119 (9%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           LE LP++I  LK LS+LNLS  ++   FP+  S    L+ + LEG  I  LP  I+ L  
Sbjct: 347 LEALPKSIKRLKKLSSLNLSN-NEIYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQN 405

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMM---------YPSGCSKLKNVTETLGKVESLE 803
                L D + L++LP  +  L +LR +         +P    +++ + + +  V+  E
Sbjct: 406 LEFLILYDNE-LRNLPPYLQDLSALRRLDISDNEFEAFPEVLYQMRQLKDLILNVDQFE 463


>gi|429962677|gb|ELA42221.1| hypothetical protein VICG_00620, partial [Vittaforma corneae ATCC
           50505]
          Length = 633

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 136/282 (48%), Gaps = 32/282 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L        P+ I  L  LE L L G K     P+ I+ LK L+ LEL 
Sbjct: 109 VEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNK-FGLFPIEIAELKKLQRLELH 167

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KLK  P  +  M++L  LYL        P+ I  L  L+ L+L   K L  LP  I 
Sbjct: 168 D-NKLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNK-LETLPVEIV 225

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LKSL+ LNL    + E  P+ +G++E+L+ L++S   +     +I  ++NL+ LY    
Sbjct: 226 KLKSLQKLNLLKN-RFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENLQELY---- 280

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                            L K+   +    P++ G + +L  L+LS+  L    +PS+I  
Sbjct: 281 -----------------LLKNRFEI---FPNVVGELENLKILNLSNNKL--KILPSEIGK 318

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L +L+ L L  N   TLPA+I  L NL EL L    +L++LP
Sbjct: 319 LENLQHLLLINNKLETLPAAIGELQNLRELNL-GGNKLETLP 359



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 651 WEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           + E + FP +++ L +       G       + I  L  L +L L+  K L+ LP  I  
Sbjct: 122 YNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNK-LKLLPDEIGG 180

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           +K L TL L G ++F  FP +      L  + L G  +  LP  I  L    L  L   K
Sbjct: 181 MKELQTLYL-GYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKS--LQKLNLLK 237

Query: 764 N-LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           N  +  P+ +  L +L+++  S  +KL+ + +T+G++E+L+
Sbjct: 238 NRFEIFPNVVGELENLKILNLSN-NKLETLPDTIGELENLQ 277


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 153/314 (48%), Gaps = 20/314 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L+ L L    ITE+P ++  LT L  L L+G +  + +P  ++ L  L  L LS
Sbjct: 168 LAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQR-TEIPEALAKLTNLTRLNLS 226

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--NECKNLVRLPSS 118
             ++  + P+ +A + +L++L L    I E+P +I  L  L  L L  N+ K    +P +
Sbjct: 227 -YNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIK---EIPET 282

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  L +L  L L G  +++ +P+ + K+ +L +L + G  I+    +I  + NL  L  S
Sbjct: 283 IAKLTNLTQLGLDG-NQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTHLILS 341

Query: 179 G--CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
           G    E P + +   +L    L  SS  +  +   L  + +LT+L LS   + +  IP  
Sbjct: 342 GNQIKEIPETIAKLTNL--TQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQ--IPEA 397

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           +  L +L  L+L  N    +P +I  L  LE L+L    R   LP  P  L  V   G  
Sbjct: 398 LAPLTNLTTLHLRVNQITQIPEAIESLPKLELLDL----RGNPLPISPEILGSVYQVG-- 451

Query: 297 SLVTLFGALKLCRS 310
           S+  +F  L+L RS
Sbjct: 452 SVEEIFNYLRLLRS 465



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 145/305 (47%), Gaps = 37/305 (12%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKG-----------------CKNLSSL 44
           A+ +   +L L G  +TE+P  I  L  LE L L                     NL +L
Sbjct: 13  AATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTL 72

Query: 45  PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELL 104
           P+ + SL  LR L++SG + L+  P +V  +  L +L L    + E+P ++  L  L  L
Sbjct: 73  PIELLSLPNLRKLDISG-NPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQL 131

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
            L++ + +  +P ++  L +L  LNLS   ++  +P+ L K+ +L +L++S   I     
Sbjct: 132 ILSDNQ-ITEIPEALAKLTNLTQLNLS-YNQITEIPEALAKLTNLTQLNLSYNQITEIPE 189

Query: 165 SIFLMKNLRSLYFSGCNE---PPASASW----HLHLPFNLLGKSSCPVALMLPSLTGVCS 217
           ++  + NL  L   G      P A A       L+L +N   ++  P A     L  + +
Sbjct: 190 ALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYN--QRTEIPEA-----LAKLTN 242

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           LT+L LSD  + E  IP  I  L +L  L L+ N    +P +I+ L NL +L L D  ++
Sbjct: 243 LTQLILSDNQIKE--IPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGL-DGNQI 299

Query: 278 QSLPQ 282
           + +P+
Sbjct: 300 KEIPE 304



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 17/175 (9%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSL----------AIELLFGLVQLTLNGCKNLE 695
           N ++L    ++  +I + L+  T++  L+L          A+  L  L QL L+  + ++
Sbjct: 196 NLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQ-IK 254

Query: 696 RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI 755
            +P TI+ L  L+ L LSG ++ +E PE  +    L ++ L+G  I+ +P +I  L+   
Sbjct: 255 EIPETIAKLTNLTHLILSG-NQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTN-- 311

Query: 756 LSNLK-DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
           L+ L  D   +K +P  I  L +L  +  SG +++K + ET+ K+ +L ++ LSS
Sbjct: 312 LTQLGLDGNQIKEIPEAITKLTNLTHLILSG-NQIKEIPETIAKLTNLTQLALSS 365



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 5/149 (3%)

Query: 659 DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF 718
           ++ Q+  DG  I+E+  AI  L  L QL L+G + ++ +P  I+ L  L+ L LSG ++ 
Sbjct: 288 NLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQ-IKEIPEAITKLTNLTHLILSG-NQI 345

Query: 719 REFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
           +E PE  +    L ++ L    I  +P  +  L+ N+         +  +P  +  L +L
Sbjct: 346 KEIPETIAKLTNLTQLALSSNQITEIPEVLAQLT-NLTQLFLSSNQITQIPEALAPLTNL 404

Query: 779 RMMY--PSGCSKLKNVTETLGKVESLEVR 805
             ++   +  +++    E+L K+E L++R
Sbjct: 405 TTLHLRVNQITQIPEAIESLPKLELLDLR 433



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 48/193 (24%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A + +L+ L+L    IT++P +IE L  LELL L+G    + LP++             
Sbjct: 398 LAPLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRG----NPLPIS------------- 440

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
                   P+I+ S+  +        S+ E+ + + LL   E+  LNE K L+    S+ 
Sbjct: 441 --------PEILGSVYQVG-------SVEEIFNYLRLLRSGEVRPLNEAKLLLVGQGSVG 485

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG-KVES-----------LEELDVSGTAIRRPTSSIFL 168
               ++ L  +   +  N P T G KVE+           L   D  G  I   T   FL
Sbjct: 486 KTSLIERLIHNKYDR--NQPQTDGLKVETWNVQVNSKDIRLNVWDFGGQEIYHATHQFFL 543

Query: 169 MKNLRSLYFSGCN 181
            K  RSLY   CN
Sbjct: 544 TK--RSLYLLVCN 554


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 152/312 (48%), Gaps = 37/312 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  I  L  L++L L   + L++LP  I  LK L+ L+L 
Sbjct: 88  IGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQ-LTTLPTEIRQLKNLQMLDL- 145

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ +  +++L +LYL    +  +P  I  L  L+LL L E + L  LP  I 
Sbjct: 146 GNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQ-LTTLPKEIG 204

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L    +L  +P  +GK+++L ELD+S   +      I  ++ L+       
Sbjct: 205 KLENLQLLSLYES-QLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQ------- 256

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                   W L+LP N L          LP   G + +L  L+LS   +    IP +I+ 
Sbjct: 257 --------W-LYLPKNQLT--------TLPQEIGQLKNLKSLNLSYNQI--KTIPKEIEK 297

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANG 294
           L  L+ LYL  N   TLP  I  L NL+ L+L    RL +LPQ   +LQ     ++ +N 
Sbjct: 298 LQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDL-STNRLTTLPQEIGHLQNLQDLYLVSNQ 356

Query: 295 CSSLVTLFGALK 306
            + L    G LK
Sbjct: 357 LTILPNEIGQLK 368



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 22/283 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L+L+   +T +P+ I  L  L++L L G   L+ LP  I  L+ L+ L LS
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDL-GNNQLTILPKEIGQLQNLQELYLS 169

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +E+L  L L  + +  +P  I  L  L+LL L E + L  LP  I 
Sbjct: 170 -YNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQ-LTILPQEIG 227

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS-- 178
            L++L  L+LS   +L  +P  +G+++ L+ L +    +      I  +KNL+SL  S  
Sbjct: 228 KLQNLHELDLSHN-QLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYN 286

Query: 179 GCNEPPASAS-----WHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
                P           L+LP N L          LP   G + +L  LDLS   L    
Sbjct: 287 QIKTIPKEIEKLQKLQSLYLPNNQLT--------TLPQEIGQLQNLQSLDLSTNRL--TT 336

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           +P +I +L +L++LYL  N    LP  I  L NL+ L L + +
Sbjct: 337 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR 379



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 143/318 (44%), Gaps = 46/318 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T +P  I  L  L+LL+L   + L++LP  I  L+ L+ L L 
Sbjct: 157 IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQ-LTTLPKEIGKLENLQLLSLY 215

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             S+L   PQ +  +++L +L L    +  +P  I  L  L+ LYL + + L  LP  I 
Sbjct: 216 E-SQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQ-LTTLPQEIG 273

Query: 121 GLKSLKTLNLS----------------------GCCKLENVPDTLGKVESLEELDVSGTA 158
            LK+LK+LNLS                         +L  +P  +G++++L+ LD+S   
Sbjct: 274 QLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNR 333

Query: 159 IRRPTSSIFLMKNLRSLYFSGC------NEPPASASWH-LHLPFNLLGKSSCPVALM--L 209
           +      I  ++NL+ LY          NE     +   L+L  N L   S  +  +  L
Sbjct: 334 LTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNL 393

Query: 210 PSL-----------TGVCSLTKLDLSDCGLGE-AAIPSDIDNLHSLKELYLNRNNFVTLP 257
            SL             +  L  L + D G  +   +P  I  L +L+ L L+ N   TLP
Sbjct: 394 KSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLP 453

Query: 258 ASISGLLNLEELELEDCK 275
             I  L NL+EL L + +
Sbjct: 454 QEIGQLQNLQELFLNNNQ 471



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 12/256 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L    +T +P  I  L  L+ L L   + L++LP  I  LK L++L LS
Sbjct: 226 IGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQ-LTTLPQEIGQLKNLKSLNLS 284

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++K  P+ +  ++ L  LYL    +  +P  I  L  L+ L L+  + L  LP  I 
Sbjct: 285 -YNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNR-LTTLPQEIG 342

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P+ +G++++L+ L++    +   +  I  ++NL+SL     
Sbjct: 343 HLQNLQDLYLV-SNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 401

Query: 181 NEP--PASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +       LP   G + +L  LDL    L    +P +I
Sbjct: 402 QLTIFPKEIGQLKNLQVLDLGSNQLTT---LPEGIGQLKNLQTLDLDSNQL--TTLPQEI 456

Query: 238 DNLHSLKELYLNRNNF 253
             L +L+EL+LN N  
Sbjct: 457 GQLQNLQELFLNNNQL 472



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFSGCNEPPASASWHLH 192
           KL  +P  + ++++L+ LD+    +      I  +KNL+   LY++     P       +
Sbjct: 57  KLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKN 116

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI-PSDIDNLHSLKELYLNRN 251
           L    L  +       LP  T +  L  L + D G  +  I P +I  L +L+ELYL+ N
Sbjct: 117 LKVLFLNNNQLTT---LP--TEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYN 171

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLP 281
              TLP  I  L NL+ L L +  +L +LP
Sbjct: 172 QLTTLPKEIGKLENLQLLSLYES-QLTTLP 200



 Score = 42.7 bits (99), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L    +T  P  I  L  L++L L G   L++LP  I  LK L+TL+L 
Sbjct: 387 IEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDL-GSNQLTTLPEGIGQLKNLQTLDLD 445

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
             ++L   PQ +  +++L +L+L+   ++
Sbjct: 446 -SNQLTTLPQEIGQLQNLQELFLNNNQLS 473


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 137/274 (50%), Gaps = 22/274 (8%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L    +T +P  I+ L  L+LL L G   L++LP  I  L+ L+ L+LS  S L
Sbjct: 49  DVRVLILSEQKLTTLPKEIKQLQNLKLLDL-GHNQLTALPKEIGQLRNLQELDLSFNS-L 106

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
              P+ V  +E+L +L L+   +  +P  I  L  L+ L L+   +L  LP  +  L++L
Sbjct: 107 TTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLS-FNSLTTLPKEVGQLENL 165

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEP 183
           + LNL+   KL  +P  +G++ +L+ELD+S  ++      +  ++NL+ L  +       
Sbjct: 166 QRLNLNSQ-KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTL 224

Query: 184 PASASW-----HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
           P           L L FN L          LP   G + +L +LDL    L  A +P +I
Sbjct: 225 PKEIGQLRNLQELDLSFNSLT--------TLPKEVGQLENLQRLDLHQNRL--ATLPMEI 274

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
             L +L+EL LN N   TLP  I  L NL+EL+L
Sbjct: 275 GQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDL 308



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 135/271 (49%), Gaps = 29/271 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L   S+T +P  +  L  L+ L L   K L++LP  I  L+ L+ L+LS
Sbjct: 90  IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK-LTTLPKEIGQLRNLQELDLS 148

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             S L   P+ V  +E+L +L L+   +  +P  I  L  L+ L L+   +L  LP  + 
Sbjct: 149 FNS-LTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLS-FNSLTTLPKEVG 206

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ LNL+   KL  +P  +G++ +L+ELD+S  ++      +  ++NL+ L     
Sbjct: 207 QLENLQRLNLNSQ-KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL----- 260

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                     LH            +A +   +  + +L +LDL+   L    +P +I  L
Sbjct: 261 ---------DLH---------QNRLATLPMEIGQLKNLQELDLNSNKL--TTLPKEIRQL 300

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            +L+EL L+RN   TLP  I  L NL+ L L
Sbjct: 301 RNLQELDLHRNQLTTLPKEIGQLQNLKTLNL 331



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 37/312 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L   S+T +P  +  L  L+ L L   K L++LP  I  L+ L+ L+LS
Sbjct: 182 IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK-LTTLPKEIGQLRNLQELDLS 240

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             S L   P+ V  +E+L +L L    +A +P  I  L  L+ L LN  K L  LP  I 
Sbjct: 241 FNS-LTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIR 298

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L    +L  +P  +G++++L+ L++  T +      I  ++NL++L     
Sbjct: 299 QLRNLQELDLHRN-QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL----- 352

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                          NLL          LP   G + +L  L L +  +   A+P +I  
Sbjct: 353 ---------------NLLDNQLT----TLPKEIGELQNLEILVLRENRI--TALPKEIGQ 391

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA-----NG 294
           L +L+ L L++N   TLP  I  L NL+EL L D  +L +LP+    LQ +R      N 
Sbjct: 392 LQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL-DENQLTTLPKEIEQLQNLRVLDLDNNQ 450

Query: 295 CSSLVTLFGALK 306
            ++L    G L+
Sbjct: 451 LTTLPKEIGQLQ 462



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 12/274 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L   S+T +P  +  L  L+ L L   + L++LP+ I  LK L+ L+L+
Sbjct: 228 IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNR-LATLPMEIGQLKNLQELDLN 286

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL   P+ +  + +L +L L    +  +P  I  L  L+ L L     L  LP  I 
Sbjct: 287 S-NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNL-IVTQLTTLPKEIG 344

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFS 178
            L++LKTLNL    +L  +P  +G++++LE L +    I      I  ++NL+   L+ +
Sbjct: 345 ELQNLKTLNLLDN-QLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQN 403

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    L ++       LP  +  + +L  LDL +  L    +P +I
Sbjct: 404 QLTTLPKEIGQLQNLQELCLDENQLTT---LPKEIEQLQNLRVLDLDNNQL--TTLPKEI 458

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
             L +L+EL L+ N   T P  I  L NL+EL L
Sbjct: 459 GQLQNLQELCLDENQLTTFPKEIRQLKNLQELHL 492


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 142/272 (52%), Gaps = 31/272 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L+ L L    +T++P+SI  L  LE L L+G + L+ LP++I  LK L+ L+L 
Sbjct: 219 IGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQ-LTILPISIGQLKSLKKLDL- 276

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +++L +L+L+  ++  +   I  L  L++L L   + L  LP+SI 
Sbjct: 277 GANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNR-LTTLPNSIG 335

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LKSL+ L+LS   KL  +P + G+++ LEEL++ G   +   + +  +K+L+ LY +  
Sbjct: 336 RLKSLRWLSLS-SNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASN 394

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL-TKLDLSDCGLGEAAIPSDIDN 239
           N           LP N +G+        LP L  +  +  KLD          +P  I  
Sbjct: 395 N--------LTTLPEN-IGQ--------LPELQYLTLVRNKLD---------RLPESIGQ 428

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L  L+ L L RN   TLP S+  L  LEEL +
Sbjct: 429 LQELQYLDLRRNRLSTLPESLGQLKKLEELNI 460



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 155/350 (44%), Gaps = 60/350 (17%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
           A +++L +L L     T +P+S+  L  LE L L    +L  LP  I  LK L+ L L+ 
Sbjct: 80  AKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTS 139

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNE------------- 108
              LKK P+ +  ++ L  L L+G+S   +P++I+L   L +L++N+             
Sbjct: 140 NLSLKKLPENITQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFSQL 199

Query: 109 ---------CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
                       LV LP++I  LK+L  LNL     L  +P ++G+++SLE+LD+ G  +
Sbjct: 200 HNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENY-LTKLPTSIGQLKSLEKLDLQGNQL 258

Query: 160 RRPTSSIFLMKNLRSLYFSGCNE---PPASAS-----WHLHLPFNLLGKSSCPVALMLPS 211
                SI  +K+L+ L   G N+    P S         L L  N L         +L  
Sbjct: 259 TILPISIGQLKSLKKLDL-GANQLTTLPTSIGQLKNLQQLFLEVNTLTS-------LLDD 310

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           +  +  L  L+L    L    +P+ I  L SL+ L L+ N    LP S   L  LEEL L
Sbjct: 311 IGKLKQLKVLNLRRNRL--TTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNL 368

Query: 272 EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
           E                    N   +++T+ G LK  +  Y   N + +L
Sbjct: 369 E-------------------GNYFQTMLTILGQLKSLKKLYLASNNLTTL 399



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 159/302 (52%), Gaps = 26/302 (8%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
           L++LP  I  LK L+ L L   ++L   P   A +++L +L L       +P+S+  L  
Sbjct: 49  LTTLPANIGELKNLKKLNLE-YNQLTTLPASFAKLQNLEELNLTRNKFTTLPASVTKLQN 107

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           LE L L +  +L +LP +I  LK+L+ LNL+    L+ +P+ + +++ L+ L+++G++  
Sbjct: 108 LEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSRI 167

Query: 161 RPTSSIFLMKNLRSLYFSG---CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VC 216
              ++I L ++LR L+ +       P   +  H     NL  KSS  VA  LP+  G + 
Sbjct: 168 ILPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNL--KSSGLVA--LPNNIGQLK 223

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
           +LT L+L +  L    +P+ I  L SL++L L  N    LP SI  L +L++L+L    +
Sbjct: 224 NLTILNLRENYL--TKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDL-GANQ 280

Query: 277 LQSLP----QIPPNLQ--FVRANGCSSLVTLFGALK------LCRSKYTII-NCIDSLKL 323
           L +LP    Q+  NLQ  F+  N  +SL+   G LK      L R++ T + N I  LK 
Sbjct: 281 LTTLPTSIGQL-KNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKS 339

Query: 324 LR 325
           LR
Sbjct: 340 LR 341



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 47/314 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L+L+  ++T +   I  L  L++L L+  + L++LP +I  LK LR L LS
Sbjct: 288 IGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNR-LTTLPNSIGRLKSLRWLSLS 346

Query: 61  GCSKLKKFPQ-----------------------IVASMEDLSKLYLDGTSIAEVPSSIEL 97
             +KL + P+                       I+  ++ L KLYL   ++  +P +I  
Sbjct: 347 -SNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQ 405

Query: 98  LPGLELLYLNECKN-LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
           LP  EL YL   +N L RLP SI  L+ L+ L+L    +L  +P++LG+++ LEEL++  
Sbjct: 406 LP--ELQYLTLVRNKLDRLPESIGQLQELQYLDLRRN-RLSTLPESLGQLKKLEELNIGA 462

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS--------WHLHLPFNLLGKSSCPVALM 208
             +    +SI  +KNL+ LY +  N+ P S +          L+L  N L   + P ++ 
Sbjct: 463 NPLVTLPNSIGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVNRL--DTLPTSIQ 520

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
                   +L    +S        +P  I  L +L+ L L  N    L  +I  L ++  
Sbjct: 521 KLKNLKKLNLLYNQIS-------IVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILR 573

Query: 269 LELEDCKRLQSLPQ 282
           L+L   K L +LPQ
Sbjct: 574 LDLSSNK-LTTLPQ 586



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 55/266 (20%)

Query: 108 ECKNLVRLPSSINGLKSLKTLNL---------SGCCKLEN-------------VPDTLGK 145
           E   L  LP++I  LK+LK LNL         +   KL+N             +P ++ K
Sbjct: 45  EHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPASVTK 104

Query: 146 VESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFS---GCNEPPASASWHLHLP-FNLLGK 200
           +++LEEL+++   ++++   +I  +KNL+ L  +      + P + +    L   NL G 
Sbjct: 105 LQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGS 164

Query: 201 SSC--PVALMLP------------------SLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           S    P  + LP                  + + + +L  L+L   GL   A+P++I  L
Sbjct: 165 SRIILPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGL--VALPNNIGQL 222

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR-----ANGC 295
            +L  L L  N    LP SI  L +LE+L+L+   +L  LP     L+ ++     AN  
Sbjct: 223 KNLTILNLRENYLTKLPTSIGQLKSLEKLDLQ-GNQLTILPISIGQLKSLKKLDLGANQL 281

Query: 296 SSLVTLFGALKLCRSKYTIINCIDSL 321
           ++L T  G LK  +  +  +N + SL
Sbjct: 282 TTLPTSIGQLKNLQQLFLEVNTLTSL 307



 Score = 39.3 bits (90), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 24/162 (14%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF----- 718
           L+D   +++L   IE L  L +L L    +L++LP  I+ LK L  LNL+G S+      
Sbjct: 113 LTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSRIILPAN 172

Query: 719 REFPE---ITSSRDQLL--------EIH------LEGTAIRGLPASIELLSGNILSNLKD 761
            + PE   I    D LL        ++H      L+ + +  LP +I  L    + NL++
Sbjct: 173 IQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRE 232

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
              L  LP++I  L+SL  +   G ++L  +  ++G+++SL+
Sbjct: 233 NY-LTKLPTSIGQLKSLEKLDLQG-NQLTILPISIGQLKSLK 272


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 135/276 (48%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T  P  I  L  L+ L L     + ++P  I  L+ L++L L 
Sbjct: 136 IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-SANQIKTIPKEIEKLQKLQSLYLP 194

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L L    I  +P  IE L  L+ LYL++ + L  LP  I 
Sbjct: 195 N-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQ-LTTLPQEIE 252

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L+ L++L L    +L  +P  +G++++L+ L ++   +      I  ++NL+ LY   +
Sbjct: 253 KLQKLESLGLDNN-QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 311

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +   +   LP   G + +L  L LS+  L    IP +I
Sbjct: 312 QLTTIPKEIGQLQNLQMLDLGNNQLTI---LPKEIGKLQNLQTLYLSNNQL--TTIPKEI 366

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L +L+ELYL+ N   T+P  I  L NL+EL L +
Sbjct: 367 GQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN 402



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 29/273 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL    +T +P  I  L  L+ L L     + +LP  I  L+ L+ L L 
Sbjct: 182 IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNL-SYNQIKTLPQEIEKLQKLQWLYLH 240

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L LD   +  +P  I  L  L++L+LN  + L  +P  I 
Sbjct: 241 K-NQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQ-LTTIPQEIG 298

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P  +G++++L+ LD+    +      I  ++NL++LY S  
Sbjct: 299 HLQNLQDLYLVSN-QLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNN 357

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               ++ P       +  + +L +L LS+  L    IP +I  L
Sbjct: 358 ------------------QLTTIP-----KEIGQLQNLQELYLSNNQL--TTIPKEIGQL 392

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +L+ELYL+ N  +T+P  I  L NL+ L L +
Sbjct: 393 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRN 425



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 37/158 (23%)

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           KL+ +P  +G++++L+ LD+S   +      I  +KNL+ L               LH  
Sbjct: 59  KLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQML--------------DLH-- 102

Query: 195 FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                  S  + ++   +  + +L  LDL    L    +P +I  L +L+ELYL+ N   
Sbjct: 103 -------SNQLIILPKEIRQLKNLQMLDLRSNQL--TILPKEIGKLQNLQELYLSNNQLT 153

Query: 255 TLPASISGLLNLEEL------------ELEDCKRLQSL 280
           T P  I  L  L+ L            E+E  ++LQSL
Sbjct: 154 TFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 191


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 144/300 (48%), Gaps = 34/300 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPNEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 240

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
                P           L L +N L         +LP   G + +L  LDL +  L    
Sbjct: 241 QLITLPKEIEQLKNLQTLDLSYNQLT--------ILPKEVGQLENLQTLDLRNNQL--KT 290

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL------------ELEDCKRLQSL 280
           +P +I+ L +L+ L+LN N    LP  I  L NL  L            E+E  K LQ+L
Sbjct: 291 LPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTL 350



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 132/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP+ I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPNEIEQLKNLQVLDL-GSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLK 322



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 25/130 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A +K L  LYL    +  +P  IE L  L+ L L     L+ LP  +  L+ L+TL+L 
Sbjct: 226 IAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDL-SYNQLTILPKEVGQLENLQTLDLR 284

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIA-----------------------EVPSSIEL 97
             ++LK  P+ +  +++L  L+L+   +                         +P+ IE 
Sbjct: 285 N-NQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQ 343

Query: 98  LPGLELLYLN 107
           L  L+ LYLN
Sbjct: 344 LKNLQTLYLN 353


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 10/273 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L  L +    ITE+P  I  LT L  L L     ++ +P  I  L  L+ L LS
Sbjct: 59  IGQLTNLKKLIIGKNKITEIPGCISQLTNLRFLGLWE-NQITEIPEFIGQLTNLKKLSLS 117

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++ + P+ +  + +L  L L    I E+P  I  L  L+ LYL++ K +  +P  I 
Sbjct: 118 A-NQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNK-ITEIPECIG 175

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L +L+ L L G  ++  +P+ +GK+ +L+ L ++G  I      I  + NL+ LYF G 
Sbjct: 176 QLTNLQNLVLIGN-QITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGN 234

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
              E P       +L    L K+   +  M   +  + +L  L+L    + E  IP  I 
Sbjct: 235 QITEMPECIGQLNNLQILNLWKNQ--ITEMPECIGQLNNLQILNLWKNQITE--IPECIG 290

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            L++L+EL L+ N    +P  I  L+NL+EL L
Sbjct: 291 QLNNLQELDLDDNKITEIPECIGQLINLQELSL 323



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 7/155 (4%)

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--SGC 180
           + +  L+LSG    E +P+ +G++ +L+ELD+    I      I  + NL+ L    +  
Sbjct: 17  EGVTELDLSGKGITE-IPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKI 75

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            E P   S   +L F  LG     +  +   +  + +L KL LS   + E  IP  I  L
Sbjct: 76  TEIPGCISQLTNLRF--LGLWENQITEIPEFIGQLTNLKKLSLSANQITE--IPKFIGYL 131

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           ++L+ L L+RN    +P  IS L NL+ L L D K
Sbjct: 132 NNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNK 166


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 150/308 (48%), Gaps = 24/308 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L LD   +T +P+ I  L  L+ L L   + L  LP  I+ L+ LR L LS
Sbjct: 88  IGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQ-LVILPKEINQLQNLRVLGLS 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-LPSSI 119
             ++LK  P+ +  +E+L  L L    +  +P+ I  L  L+ L L   KN++  LP  I
Sbjct: 147 N-NQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDL--SKNILTILPKEI 203

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK+L+ L LS   +L+ +P  +G++E+L+ L +S   +    + I  +KNL  LY   
Sbjct: 204 GQLKNLRELYLS-SNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGK 262

Query: 180 --CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE---AAIP 234
                 P       +LP   L  +       LP   G       +L +  LG     A+P
Sbjct: 263 NLLTTLPKEVGQLKNLPTLDLSNNRLTT---LPKEIGQLK----NLRELYLGTNQFTALP 315

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----F 289
            +I  L +L+ L+LN N   TLP  I  L NL+ L+L D  +L++LP+    LQ     +
Sbjct: 316 KEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLND-NQLKTLPKEIEKLQNLQRLY 374

Query: 290 VRANGCSS 297
           ++ N  SS
Sbjct: 375 LQYNQLSS 382



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 120/253 (47%), Gaps = 31/253 (12%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL------- 106
           +R L+LS   KLK  P  +  +++L  LYL    +  +P+ I  L  L+ L L       
Sbjct: 48  VRVLDLSE-QKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTT 106

Query: 107 --NEC-------------KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
             NE                LV LP  IN L++L+ L LS   +L+ +P  +G++E+L+ 
Sbjct: 107 LPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSN-NQLKILPKEIGQLENLQT 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEPPASASWHLHLPFNLLGKSSCPVALML 209
           LD+    ++   + I  +KNL++L  S       P       +L    L  SS  +  + 
Sbjct: 166 LDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRE--LYLSSNQLKTLP 223

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
             +  + +L  L LSD  L    +P++I  L +L ELYL +N   TLP  +  L NL  L
Sbjct: 224 KEIGQLENLQTLHLSDNQL--TTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTL 281

Query: 270 ELEDCKRLQSLPQ 282
           +L +  RL +LP+
Sbjct: 282 DLSN-NRLTTLPK 293


>gi|359495256|ref|XP_002272078.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1130

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 4/96 (4%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           I++ PS    +  L++L LKGCK L SLP +I  LKCL  L  SGCS L+ FP+I   ME
Sbjct: 645 ISKFPS----MPALKILRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKME 700

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL 112
           +L +L+LD T+I E+PSSI  L  LE L L  CKNL
Sbjct: 701 NLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNL 736



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 48/82 (58%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L L GCK L  LP +I  LK L  L  SG S    FPEIT   + L E+HL+ TAI+ LP
Sbjct: 657 LRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKELHLDETAIKELP 716

Query: 746 ASIELLSGNILSNLKDCKNLKS 767
           +SI  L+     NL+ CKNL S
Sbjct: 717 SSIYHLTALEFLNLEHCKNLGS 738



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 19/116 (16%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           I++ PS    +P L++L L  CK L  LPSSI  LK L+ L  SGC  LE  P+   K+E
Sbjct: 645 ISKFPS----MPALKILRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKME 700

Query: 148 SLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---------------NEPPASAS 188
           +L+EL +  TAI+   SSI+ +  L  L    C               NEPP+  S
Sbjct: 701 NLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNLGSELRSCLPCPENEPPSCVS 756



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 30/40 (75%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS 43
           M++L +L+LD T+I E+PSSI  LT LE L L+ CKNL S
Sbjct: 699 MENLKELHLDETAIKELPSSIYHLTALEFLNLEHCKNLGS 738



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
           +SL  LD+S + IR+       + NL+ +  S C      + +       +L    C   
Sbjct: 606 DSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISKFPSMPALKILRLKGCKKL 665

Query: 207 LMLPSLTGVCSLTKLDL---SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGL 263
             LPS   +C L  L+    S C   EA  P   + + +LKEL+L+      LP+SI  L
Sbjct: 666 RSLPS--SICELKCLECLWCSGCSNLEA-FPEITEKMENLKELHLDETAIKELPSSIYHL 722

Query: 264 LNLEELELEDCKRLQS 279
             LE L LE CK L S
Sbjct: 723 TALEFLNLEHCKNLGS 738



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           LK CK L+SLPS+I  L+ L  ++ SGCS L+   E   K+E+L+
Sbjct: 659 LKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLK 703


>gi|357469529|ref|XP_003605049.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506104|gb|AES87246.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1352

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 115/278 (41%), Gaps = 63/278 (22%)

Query: 23  SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLY 82
           S+  +  L  L+  GC  L S  V    L  L+ +  + C K + FP ++  M+   K++
Sbjct: 661 SVGFMPNLVYLSASGCTELKSF-VPKMYLPSLQVISFNFCKKFEHFPHVIQKMDRPLKIH 719

Query: 83  LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
           +  T+I E+P SI  L GLEL+ ++ CK L  L SS   L  L TL + GC +L      
Sbjct: 720 MINTAIKEIPKSIGNLTGLELMDMSICKGLKDLSSSFLLLPKLVTLKIDGCSQLR----- 774

Query: 143 LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS 202
                       S    +   S      N+ +L+FSG N                     
Sbjct: 775 -----------TSFQRFKERNSGANGYPNIETLHFSGAN--------------------- 802

Query: 203 CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
                                    L    + + I+N   L++L +  N FV+LP  I G
Sbjct: 803 -------------------------LSNDDVNAIIENFPKLEDLKVFHNWFVSLPNCIRG 837

Query: 263 LLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            L+L+ L++  CK L  +P++P N+Q + A  C SL +
Sbjct: 838 SLHLKSLDVSFCKNLTEIPELPLNIQKIDARYCQSLTS 875



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 10/141 (7%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           +++  T+I E+P SI  LTGLEL+ +  CK L  L  +   L  L TL++ GCS+L+   
Sbjct: 718 IHMINTAIKEIPKSIGNLTGLELMDMSICKGLKDLSSSFLLLPKLVTLKIDGCSQLRTSF 777

Query: 70  QIVASME-------DLSKLYLDGTSIA--EVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           Q             ++  L+  G +++  +V + IE  P LE L +      V LP+ I 
Sbjct: 778 QRFKERNSGANGYPNIETLHFSGANLSNDDVNAIIENFPKLEDLKVFH-NWFVSLPNCIR 836

Query: 121 GLKSLKTLNLSGCCKLENVPD 141
           G   LK+L++S C  L  +P+
Sbjct: 837 GSLHLKSLDVSFCKNLTEIPE 857



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 676 AIELLFGLVQLTLNGCKNLER-LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           ++  +  LV L+ +GC  L+  +P+    L  L  ++ +   KF  FP +    D+ L+I
Sbjct: 661 SVGFMPNLVYLSASGCTELKSFVPKMY--LPSLQVISFNFCKKFEHFPHVIQKMDRPLKI 718

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
           H+  TAI+ +P SI  L+G  L ++  CK LK L S+   L  L  +   GCS+L+
Sbjct: 719 HMINTAIKEIPKSIGNLTGLELMDMSICKGLKDLSSSFLLLPKLVTLKIDGCSQLR 774


>gi|93005765|ref|YP_580202.1| hypothetical protein Pcryo_0937 [Psychrobacter cryohalolentis K5]
 gi|92393443|gb|ABE74718.1| Leucine-rich repeat, typical subtype [Psychrobacter cryohalolentis
           K5]
          Length = 757

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 143/306 (46%), Gaps = 51/306 (16%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M ++++L +L L G  + ++P S   L+ L  LT+ G  NL+ LP ++  L+ L +L L 
Sbjct: 105 MGNLENLEELQLRGNGLKKLPDSFGQLSNLIYLTINGNYNLTELPESLGGLENLESLTLG 164

Query: 61  --GCSKLKK---------------------FPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
             G +KL +                      P+ +  + +L  L L+ +   ++P SI  
Sbjct: 165 YMGITKLPESIGQLSKLKYLTIEDLENIIDLPESIKDLGNLESLTLENSGFKKLPESIGQ 224

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L  L  L +N   N+   P SI  L  L+ L+L G   ++ +PD++GK+ SL EL++S  
Sbjct: 225 LLNLTNLTINYNNNITEFPESIGNLNILEYLSLGGNS-VKKLPDSIGKLFSLRELNISNI 283

Query: 158 --AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV 215
             +I  P  SI  +KNL SL     N           LP N+              L+ +
Sbjct: 284 EKSIDIP-ESIGNLKNLESLSLGYINIK--------KLPENIF------------QLSSL 322

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            SLT +D     +    I  +I+ L +L+ LYL  NNF  LP+SI  L  L +L +E   
Sbjct: 323 LSLTIVD----NMKLTEISENINKLKNLETLYLKGNNFKKLPSSIGQLSKLIDLSIEYTG 378

Query: 276 RLQSLP 281
           ++  +P
Sbjct: 379 KITEIP 384



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 162/338 (47%), Gaps = 35/338 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L    IT++P SI  L+ L+ LT++  +N+  LP +I  L  L +L L 
Sbjct: 152 LGGLENLESLTLGYMGITKLPESIGQLSKLKYLTIEDLENIIDLPESIKDLGNLESLTLE 211

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
             S  KK P+ +  + +L+ L ++   +I E P SI  L  LE L L    ++ +LP SI
Sbjct: 212 N-SGFKKLPESIGQLLNLTNLTINYNNNITEFPESIGNLNILEYLSLG-GNSVKKLPDSI 269

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL----------- 168
             L SL+ LN+S   K  ++P+++G +++LE L +    I++   +IF            
Sbjct: 270 GKLFSLRELNISNIEKSIDIPESIGNLKNLESLSLGYINIKKLPENIFQLSSLLSLTIVD 329

Query: 169 -------------MKNLRSLYFSGCN-EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
                        +KNL +LY  G N +   S+   L    +L  + +  +  +  SL  
Sbjct: 330 NMKLTEISENINKLKNLETLYLKGNNFKKLPSSIGQLSKLIDLSIEYTGKITEIPDSLVE 389

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLEELELED 273
           + +L  L L  CG+    +P ++ +L  L  L +  N  +T  P S++G+ NLE L L +
Sbjct: 390 LNNLQNLTL--CGMEIKKLPENMSHLSCLTNLTITHNRKLTEFPESVAGIKNLEILSLNE 447

Query: 274 --CKRLQSLPQIPPNLQ--FVRANGCSSLVTLFGALKL 307
              K L        NL+  ++ +N   SL  L   +KL
Sbjct: 448 NSLKTLSESINKMENLKYLYLASNSLKSLPDLSNLIKL 485



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 127/260 (48%), Gaps = 11/260 (4%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           I+ +P SI  L  L    L+G K +  LP +I  L  L+ L +S   KL + P+ + ++E
Sbjct: 51  ISTIPESIGNLKSLVTFALEGSK-VKKLPNSIGELSKLKQLVISSNDKLTELPKSMGNLE 109

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           +L +L L G  + ++P S   L  L  L +N   NL  LP S+ GL++L++L L G   +
Sbjct: 110 NLEELQLRGNGLKKLPDSFGQLSNLIYLTINGNYNLTELPESLGGLENLESLTL-GYMGI 168

Query: 137 ENVPDTLGKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYF--SGCNEPPASASWHLH 192
             +P+++G++  L+ L +      I  P  SI  + NL SL    SG  + P S    L+
Sbjct: 169 TKLPESIGQLSKLKYLTIEDLENIIDLP-ESIKDLGNLESLTLENSGFKKLPESIGQLLN 227

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRN 251
           L  NL    +  +     S+  +  L  L L   G     +P  I  L SL+EL + N  
Sbjct: 228 LT-NLTINYNNNITEFPESIGNLNILEYLSLG--GNSVKKLPDSIGKLFSLRELNISNIE 284

Query: 252 NFVTLPASISGLLNLEELEL 271
             + +P SI  L NLE L L
Sbjct: 285 KSIDIPESIGNLKNLESLSL 304



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 153/314 (48%), Gaps = 14/314 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K L    L+G+ + ++P+SI  L+ L+ L +     L+ LP ++ +L+ L  L+L 
Sbjct: 58  IGNLKSLVTFALEGSKVKKLPNSIGELSKLKQLVISSNDKLTELPKSMGNLENLEELQLR 117

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           G + LKK P     + +L  L ++G  ++ E+P S+  L  LE L L     + +LP SI
Sbjct: 118 G-NGLKKLPDSFGQLSNLIYLTINGNYNLTELPESLGGLENLESLTLG-YMGITKLPESI 175

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL---Y 176
             L  LK L +     + ++P+++  + +LE L +  +  ++   SI  + NL +L   Y
Sbjct: 176 GQLSKLKYLTIEDLENIIDLPESIKDLGNLESLTLENSGFKKLPESIGQLLNLTNLTINY 235

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            +   E P S      L +  LG +S  V  +  S+  + SL +L++S+       IP  
Sbjct: 236 NNNITEFPESIGNLNILEYLSLGGNS--VKKLPDSIGKLFSLRELNISNIE-KSIDIPES 292

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVR 291
           I NL +L+ L L   N   LP +I  L +L  L + D  +L  + +    L+     +++
Sbjct: 293 IGNLKNLESLSLGYINIKKLPENIFQLSSLLSLTIVDNMKLTEISENINKLKNLETLYLK 352

Query: 292 ANGCSSLVTLFGAL 305
            N    L +  G L
Sbjct: 353 GNNFKKLPSSIGQL 366



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 11/273 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++  L  L L G S+ ++P SI  L  L  L +   +    +P +I +LK L +L L 
Sbjct: 246 IGNLNILEYLSLGGNSVKKLPDSIGKLFSLRELNISNIEKSIDIPESIGNLKNLESLSL- 304

Query: 61  GCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           G   +KK P+ +  +  L  L + D   + E+  +I  L  LE LYL +  N  +LPSSI
Sbjct: 305 GYINIKKLPENIFQLSSLLSLTIVDNMKLTEISENINKLKNLETLYL-KGNNFKKLPSSI 363

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR---PTSSIFLMKNLRSLY 176
             L  L  L++    K+  +PD+L ++ +L+ L + G  I++     S +  + NL   +
Sbjct: 364 GQLSKLIDLSIEYTGKITEIPDSLVELNNLQNLTLCGMEIKKLPENMSHLSCLTNLTITH 423

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
                E P S +   +L    L ++S     +  S+  + +L  L L+   L   ++P D
Sbjct: 424 NRKLTEFPESVAGIKNLEILSLNENSLKT--LSESINKMENLKYLYLASNSL--KSLP-D 478

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
           + NL  L+ L L+ N   +LP SI G+ NLE +
Sbjct: 479 LSNLIKLEYLELDNNKLNSLPESIIGMENLESM 511



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 30/251 (11%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           +P     L  L  LE+S   ++   P+ + +++ L    L+G+ + ++P+SI  L  L+ 
Sbjct: 30  IPRKPKKLIKLEVLEISYNDEISTIPESIGNLKSLVTFALEGSKVKKLPNSIGELSKLKQ 89

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRP 162
           L ++    L  LP S+  L++L+ L L G   L+ +PD+ G++ +L  L ++G   +   
Sbjct: 90  LVISSNDKLTELPKSMGNLENLEELQLRGNG-LKKLPDSFGQLSNLIYLTINGNYNLTEL 148

Query: 163 TSSIFLMKNLRSLY--FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK 220
             S+  ++NL SL   + G  + P S           +G+ S    L +  L  +  L  
Sbjct: 149 PESLGGLENLESLTLGYMGITKLPES-----------IGQLSKLKYLTIEDLENIIDL-- 195

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
                        P  I +L +L+ L L  + F  LP SI  LLNL  L +     +   
Sbjct: 196 -------------PESIKDLGNLESLTLENSGFKKLPESIGQLLNLTNLTINYNNNITEF 242

Query: 281 PQIPPNLQFVR 291
           P+   NL  + 
Sbjct: 243 PESIGNLNILE 253



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 17/170 (10%)

Query: 649 RLWEEADEF---PDIV----------QVL--SDGTDIRELSLAIELLFGLVQLTLNGCKN 693
            +W+ AD+F    DI+          +VL  S   +I  +  +I  L  LV   L G K 
Sbjct: 15  EIWDWADKFNIEKDIIPRKPKKLIKLEVLEISYNDEISTIPESIGNLKSLVTFALEGSK- 73

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +++LP +I  L  L  L +S   K  E P+   + + L E+ L G  ++ LP S   LS 
Sbjct: 74  VKKLPNSIGELSKLKQLVISSNDKLTELPKSMGNLENLEELQLRGNGLKKLPDSFGQLSN 133

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            I   +    NL  LP ++ GL +L  +   G   +  + E++G++  L+
Sbjct: 134 LIYLTINGNYNLTELPESLGGLENLESL-TLGYMGITKLPESIGQLSKLK 182



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 6/140 (4%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT 725
           D   + E+S  I  L  L  L L G  N ++LP +I  L  L  L++    K  E P+  
Sbjct: 329 DNMKLTEISENINKLKNLETLYLKG-NNFKKLPSSIGQLSKLIDLSIEYTGKITEIPDSL 387

Query: 726 SSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN--LKSLPSTINGLRSLRMMYP 783
              + L  + L G  I+ LP ++  LS   L+NL    N  L   P ++ G+++L ++  
Sbjct: 388 VELNNLQNLTLCGMEIKKLPENMSHLS--CLTNLTITHNRKLTEFPESVAGIKNLEILSL 445

Query: 784 SGCSKLKNVTETLGKVESLE 803
           +  S LK ++E++ K+E+L+
Sbjct: 446 NENS-LKTLSESINKMENLK 464



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 24/165 (14%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
            + D  +I +L  +I+ L  L  LTL      ++LP +I  L  L+ L ++  +   EFP
Sbjct: 185 TIEDLENIIDLPESIKDLGNLESLTLENS-GFKKLPESIGQLLNLTNLTINYNNNITEFP 243

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASI-------ELLSGNI---------LSNLKDCK--- 763
           E   + + L  + L G +++ LP SI       EL   NI         + NLK+ +   
Sbjct: 244 ESIGNLNILEYLSLGGNSVKKLPDSIGKLFSLRELNISNIEKSIDIPESIGNLKNLESLS 303

Query: 764 ----NLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
               N+K LP  I  L SL  +      KL  ++E + K+++LE 
Sbjct: 304 LGYINIKKLPENIFQLSSLLSLTIVDNMKLTEISENINKLKNLET 348



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 9/117 (7%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI- 748
           G  ++++LP +I  L  L  LN+S + K  + PE   +   L  + L    I+ LP +I 
Sbjct: 258 GGNSVKKLPDSIGKLFSLRELNISNIEKSIDIPESIGNLKNLESLSLGYINIKKLPENIF 317

Query: 749 ---ELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               LLS  I+ N+K    L  +   IN L++L  +Y  G +  K +  ++G++  L
Sbjct: 318 QLSSLLSLTIVDNMK----LTEISENINKLKNLETLYLKG-NNFKKLPSSIGQLSKL 369



 Score = 39.3 bits (90), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 2/140 (1%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           V+S    + EL  ++  L  L +L L G   L++LP +   L  L  L ++G     E P
Sbjct: 91  VISSNDKLTELPKSMGNLENLEELQLRG-NGLKKLPDSFGQLSNLIYLTINGNYNLTELP 149

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           E     + L  + L    I  LP SI  LS      ++D +N+  LP +I  L +L  + 
Sbjct: 150 ESLGGLENLESLTLGYMGITKLPESIGQLSKLKYLTIEDLENIIDLPESIKDLGNLESLT 209

Query: 783 PSGCSKLKNVTETLGKVESL 802
               S  K + E++G++ +L
Sbjct: 210 LEN-SGFKKLPESIGQLLNL 228


>gi|168068813|ref|XP_001786216.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661901|gb|EDQ48971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 344

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 152/301 (50%), Gaps = 23/301 (7%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+T +P+ +  LT L  L ++GC +L++LP  + +L  L  L++ GCS L   P  + ++
Sbjct: 36  SLTSLPNELGNLTSLTTLNIRGCSSLTTLPNELGNLTSLTILDIYGCSSLTSLPNELGNL 95

Query: 76  EDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+ L ++  S +  +P+ + +L  L  L +  CK+L+ LP+ +  L SL TLN+  C 
Sbjct: 96  TSLTTLNMEWCSNLTLLPNELGMLTSLTTLNMKCCKSLILLPNELGNLTSLTTLNIRECS 155

Query: 135 KLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC-------NEPPAS 186
            L  +P+ LG + SL  LD+ G +++    + +  + +L +L    C       NE    
Sbjct: 156 SLITLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNIRECSSLTTLPNELGNV 215

Query: 187 ASWH-LHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
            S   LH+ +       C     LP+ L  + SLT LD+  C     ++P+++ NL SL 
Sbjct: 216 TSLTTLHIGW-------CNKLTSLPNELGNLTSLTTLDMGLCT-KLTSLPNELGNLTSLT 267

Query: 245 ELYLN-RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVT 300
            L +   +   +LP  +  L +L  L ++ CK L SLP    N   L  +   GCSSL +
Sbjct: 268 RLNIEWCSRLTSLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYGCSSLTS 327

Query: 301 L 301
           L
Sbjct: 328 L 328



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 150/314 (47%), Gaps = 30/314 (9%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+T +P+ + +LT L  L +K C +L+SLP  + +L  L TL + GCS L   P  + ++
Sbjct: 12  SLTSLPNELGMLTSLTTLNMKSCGSLTSLPNELGNLTSLTTLNIRGCSSLTTLPNELGNL 71

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+ L + G +S+  +P+ +  L  L  L +  C NL  LP+ +  L SL TLN+  C 
Sbjct: 72  TSLTILDIYGCSSLTSLPNELGNLTSLTTLNMEWCSNLTLLPNELGMLTSLTTLNMKCCK 131

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L  +P+ LG + SL  L+     IR  +S I L   L +L                   
Sbjct: 132 SLILLPNELGNLTSLTTLN-----IRECSSLITLPNELGNLT-----------------S 169

Query: 195 FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN-RNN 252
             +L    C     LP+ L  + SLT L++ +C      +P+++ N+ SL  L++   N 
Sbjct: 170 LTILDIYGCSSLTSLPNELGNLTSLTTLNIRECS-SLTTLPNELGNVTSLTTLHIGWCNK 228

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL-QFVRAN--GCSSLVTLFGALKLCR 309
             +LP  +  L +L  L++  C +L SLP    NL    R N   CS L +L   L +  
Sbjct: 229 LTSLPNELGNLTSLTTLDMGLCTKLTSLPNELGNLTSLTRLNIEWCSRLTSLPNELGMLT 288

Query: 310 SKYTI-INCIDSLK 322
           S  T+ + C  SL 
Sbjct: 289 SLTTLNMKCCKSLT 302



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 80/140 (57%), Gaps = 1/140 (0%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+T +P+ +  +T L  L +  C  L+SLP  + +L  L TL++  C+KL   P  + ++
Sbjct: 204 SLTTLPNELGNVTSLTTLHIGWCNKLTSLPNELGNLTSLTTLDMGLCTKLTSLPNELGNL 263

Query: 76  EDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L++L ++  S +  +P+ + +L  L  L +  CK+L  LP+ +  L SL  L++ GC 
Sbjct: 264 TSLTRLNIEWCSRLTSLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYGCS 323

Query: 135 KLENVPDTLGKVESLEELDV 154
            L ++P+ LG V SL  LD+
Sbjct: 324 SLTSLPNELGNVTSLTTLDM 343



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 2/149 (1%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           D+Y   +S+T +P+ +  LT L  L ++ C +L++LP  + ++  L TL +  C+KL   
Sbjct: 174 DIY-GCSSLTSLPNELGNLTSLTTLNIRECSSLTTLPNELGNVTSLTTLHIGWCNKLTSL 232

Query: 69  PQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           P  + ++  L+ L +   T +  +P+ +  L  L  L +  C  L  LP+ +  L SL T
Sbjct: 233 PNELGNLTSLTTLDMGLCTKLTSLPNELGNLTSLTRLNIEWCSRLTSLPNELGMLTSLTT 292

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSG 156
           LN+  C  L ++P+ LG + SL  LD+ G
Sbjct: 293 LNMKCCKSLTSLPNELGNLISLTILDIYG 321



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 20/180 (11%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL------LFGL 683
           P E GN           CS L    +E  ++  + +   +IRE S    L      +  L
Sbjct: 161 PNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTT--LNIRECSSLTTLPNELGNVTSL 218

Query: 684 VQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIR 742
             L +  C  L  LP  +  L  L+TL++   +K    P    +   L  +++E  + + 
Sbjct: 219 TTLHIGWCNKLTSLPNELGNLTSLTTLDMGLCTKLTSLPNELGNLTSLTRLNIEWCSRLT 278

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP  + +L+     N+K CK+L SLP+ +  L SL ++   GCS L ++   LG V SL
Sbjct: 279 SLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYGCSSLTSLPNELGNVTSL 338



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-G 738
           L  L  L + GC +L  LP  +  L  L+ L++ G S     P    +   L  +++E  
Sbjct: 47  LTSLTTLNIRGCSSLTTLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNMEWC 106

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           + +  LP  + +L+     N+K CK+L  LP+ +  L SL  +    CS L  +   LG 
Sbjct: 107 SNLTLLPNELGMLTSLTTLNMKCCKSLILLPNELGNLTSLTTLNIRECSSLITLPNELGN 166

Query: 799 VESLEV 804
           + SL +
Sbjct: 167 LTSLTI 172



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 10/163 (6%)

Query: 641 PQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           P E GN + L     E+   + +L +          + +L  L  L +  CK+L  LP  
Sbjct: 89  PNELGNLTSLTTLNMEWCSNLTLLPN---------ELGMLTSLTTLNMKCCKSLILLPNE 139

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNL 759
           +  L  L+TLN+   S     P    +   L  + + G +++  LP  +  L+     N+
Sbjct: 140 LGNLTSLTTLNIRECSSLITLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNI 199

Query: 760 KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           ++C +L +LP+ +  + SL  ++   C+KL ++   LG + SL
Sbjct: 200 RECSSLTTLPNELGNVTSLTTLHIGWCNKLTSLPNELGNLTSL 242



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +T +P+ + +LT L  L +K CK+L+SLP  + +L  L  L++ GCS L   P  + ++ 
Sbjct: 277 LTSLPNELGMLTSLTTLNMKCCKSLTSLPNELGNLISLTILDIYGCSSLTSLPNELGNVT 336

Query: 77  DLSKLYLD 84
            L+ L ++
Sbjct: 337 SLTTLDME 344



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L + GC +L  LP  +  L  L+TLN+   S     P        L  ++++  
Sbjct: 71  LTSLTILDIYGCSSLTSLPNELGNLTSLTTLNMEWCSNLTLLPNELGMLTSLTTLNMKCC 130

Query: 740 -AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            ++  LP  +  L+     N+++C +L +LP+ +  L SL ++   GCS L ++   LG 
Sbjct: 131 KSLILLPNELGNLTSLTTLNIRECSSLITLPNELGNLTSLTILDIYGCSSLTSLPNELGN 190

Query: 799 VESL 802
           + SL
Sbjct: 191 LTSL 194



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 1/131 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  L +  C NL  LP  +  L  L+TLN+         P    +   L  +++ E 
Sbjct: 95  LTSLTTLNMEWCSNLTLLPNELGMLTSLTTLNMKCCKSLILLPNELGNLTSLTTLNIREC 154

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+   + ++  C +L SLP+ +  L SL  +    CS L  +   LG 
Sbjct: 155 SSLITLPNELGNLTSLTILDIYGCSSLTSLPNELGNLTSLTTLNIRECSSLTTLPNELGN 214

Query: 799 VESLEVRLSSW 809
           V SL      W
Sbjct: 215 VTSLTTLHIGW 225



 Score = 39.3 bits (90), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 679 LLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           +L  L  L +  C +L  LP  +  L  L+TLN+ G S     P    +   L  + + G
Sbjct: 22  MLTSLTTLNMKSCGSLTSLPNELGNLTSLTTLNIRGCSSLTTLPNELGNLTSLTILDIYG 81

Query: 739 -TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
            +++  LP  +  L+     N++ C NL  LP+ +  L SL  +    C  L  +   LG
Sbjct: 82  CSSLTSLPNELGNLTSLTTLNMEWCSNLTLLPNELGMLTSLTTLNMKCCKSLILLPNELG 141

Query: 798 KVESL 802
            + SL
Sbjct: 142 NLTSL 146


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 29/274 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L DL L    +T +P  I  L  L++L L G + L++LP  I  LK L+ L L 
Sbjct: 228 IGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQ-LTTLPKDIGYLKELQVLHLE 286

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++    P+ +  +++L  LYL    +  +P  I  L  L++LYL+  + L  LP  I 
Sbjct: 287 D-NQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQ-LTTLPKEIG 344

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK L+ L LS   +L  +P  +G++++L+ L +    +      I  ++NL  LY S  
Sbjct: 345 HLKGLQELYLSNN-QLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLS-- 401

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                         +N L  +S P       +  + +L KLDLS+  L    +P++I  L
Sbjct: 402 --------------YNQL--TSLP-----KDIGKLQNLQKLDLSNNQL--TTLPNEIGKL 438

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
            +L+ELYL+ N   TLP  I  L  L  L+L+D 
Sbjct: 439 QNLQELYLSNNKLKTLPDEIGKLQKLRTLDLDDI 472



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 30/292 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L    +T +P  I  L  L+ L L   K L++LP  I  L+ L+ L+LS
Sbjct: 205 IGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNK-LTALPKDIGKLQNLQVLDLS 263

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ +  +++L  L+L+      +P  I  L  L +LYL   + L  LP  I 
Sbjct: 264 G-NQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQ-LTILPKEIG 321

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P  +G ++ L+EL +S   +      I  ++NL+ LY    
Sbjct: 322 KLQNLQVLYLH-SNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLH-- 378

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                 ++    LP  +    + PV  +        S  +L          ++P DI  L
Sbjct: 379 ------SNQLTTLPKEIGQLQNLPVLYL--------SYNQL---------TSLPKDIGKL 415

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            +L++L L+ N   TLP  I  L NL+EL L + K L++LP     LQ +R 
Sbjct: 416 QNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNK-LKTLPDEIGKLQKLRT 466



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 29/242 (11%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
           L++LP  I  L+ L+ L+L G +++   P+ +  +++L KL L    +  +P  IE L  
Sbjct: 60  LTTLPKDIGKLQKLQKLDLRG-NRIATLPKEIGYLKELQKLDLSNNQLKTLPKDIEQLQK 118

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
             +L+LN   N   LP  I  LK L+ L L    +L+ +P  + ++++L+ L+++   ++
Sbjct: 119 PLVLHLN-YNNFTTLPKEIGKLKELQGLELYNN-QLKTLPKDIERLQNLQVLNLTNNQLK 176

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK 220
                I  ++NL+ L   G N+                      + ++   +  + +L  
Sbjct: 177 TLPKDIGKLQNLQVLRL-GNNK----------------------LTILSKEIGKLQNLQV 213

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
           LDL++  L    +P DI +L  L++L L+ N    LP  I  L NL+ L+L    +L +L
Sbjct: 214 LDLTNNQL--TTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLS-GNQLTTL 270

Query: 281 PQ 282
           P+
Sbjct: 271 PK 272


>gi|357469491|ref|XP_003605030.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506085|gb|AES87227.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1391

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 176/427 (41%), Gaps = 76/427 (17%)

Query: 22  SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKL 81
           +S  +   L  + L   ++++ +P  +S  K LR L +  C KL +F +    + +L  +
Sbjct: 645 NSFRIFEDLTFINLSHSQSITQIP-NLSGAKNLRVLTVDKCHKLVRFEKSNGFLPNL--V 701

Query: 82  YLDGTSIAEVPSSIE--LLPGLELLYLNECKNLVRLPSSINGL-KSLKTLNLSGCCKLEN 138
           YL  +  +E+ S +    LP L+ L  N CK     P  +  + K LK   +S   K   
Sbjct: 702 YLSASGCSELKSFVPKMYLPSLQELSFNFCKKFKHFPQVMQKMDKPLKIHMISTAIK--E 759

Query: 139 VPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL 197
            P ++G ++ LE +D+S    +   +SS  L+  L +L   GC++        L + F  
Sbjct: 760 FPKSIGNLKGLEYMDMSICKGLTELSSSFLLLPKLVTLKIDGCSQ--------LGISFRR 811

Query: 198 LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
             K    VA       G  ++  L  S+  L    + + I+N   L++L ++ N FV LP
Sbjct: 812 F-KERHSVA------NGYPNVETLHFSEANLSYEDVNAIIENFPKLEDLKVSHNGFVALP 864

Query: 258 ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINC 317
             I   L+L+ L++  C+ L  +P++P ++Q + A  C SL     AL    SK +    
Sbjct: 865 NYIRRSLHLKNLDVSFCRNLTEIPELPSSVQKIDARHCQSLTP--EALSFLWSKVS---- 918

Query: 318 IDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRP 377
                            +E   +Q V        +  P  +IP+WF  +           
Sbjct: 919 -----------------QEIQRIQVV--------MPMPKREIPEWFDCKRS------QEI 947

Query: 378 SYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHV 437
              +   K   FA+  VFQ  K +    +F+               EG  ++   K  H 
Sbjct: 948 PLFWARRKFPVFALALVFQEAKKTDSRSMFY---------------EGMNLFTGFKSWHT 992

Query: 438 VSDHLWL 444
           VS HL++
Sbjct: 993 VSLHLFM 999



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 679 LLFGLVQLTLNGCKNLER-LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE 737
            L  LV L+ +GC  L+  +P+    L  L  L+ +   KF+ FP++    D+ L+IH+ 
Sbjct: 696 FLPNLVYLSASGCSELKSFVPKMY--LPSLQELSFNFCKKFKHFPQVMQKMDKPLKIHMI 753

Query: 738 GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            TAI+  P SI  L G    ++  CK L  L S+   L  L  +   GCS+L
Sbjct: 754 STAIKEFPKSIGNLKGLEYMDMSICKGLTELSSSFLLLPKLVTLKIDGCSQL 805


>gi|297794833|ref|XP_002865301.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311136|gb|EFH41560.1| hypothetical protein ARALYDRAFT_917053 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1164

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 13/151 (8%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  LYLDGT I+++P ++  L  L LL +K CK L ++P  +  LK L+ L LSGC K
Sbjct: 737 ENLEALYLDGTVISQLPDNVVNLKRLVLLNMKDCKMLENIPTCVGELKALQKLILSGCLK 796

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK- 123
           LK+FP+I  S   L  L LDGTSI  +P     LP ++ L L+    +  LP  IN L  
Sbjct: 797 LKEFPEINKS--SLKILLLDGTSIKTMPQ----LPSVQYLCLSRNDQISYLPVGINQLTY 850

Query: 124 ------SLKTLNLSGCCKLENVPDTLGKVES 148
                 +L+ L+  GC  L+NV   L ++ S
Sbjct: 851 VPELPPTLQYLDAHGCSSLKNVATPLARIVS 881



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 80/131 (61%), Gaps = 7/131 (5%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           L+ L L+GC +L SL     +L  L+TL LS CS  K+FP I    E+L  LYLDGT I+
Sbjct: 696 LQRLNLEGCTSLESLRDV--NLMSLKTLTLSNCSNFKEFPLIP---ENLEALYLDGTVIS 750

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           ++P ++  L  L LL + +CK L  +P+ +  LK+L+ L LSGC KL+  P+      SL
Sbjct: 751 QLPDNVVNLKRLVLLNMKDCKMLENIPTCVGELKALQKLILSGCLKLKEFPEI--NKSSL 808

Query: 150 EELDVSGTAIR 160
           + L + GT+I+
Sbjct: 809 KILLLDGTSIK 819



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 7/147 (4%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           RLWE   + P +  V L+  + +  LS  +     L +L L GC +LE L R ++ L  L
Sbjct: 662 RLWEGVKDTPVLKWVDLNHSSKLCSLS-GLSKAQNLQRLNLEGCTSLESL-RDVN-LMSL 718

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            TL LS  S F+EFP I    + L  ++L+GT I  LP ++  L   +L N+KDCK L++
Sbjct: 719 KTLTLSNCSNFKEFPLIP---ENLEALYLDGTVISQLPDNVVNLKRLVLLNMKDCKMLEN 775

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +P+ +  L++L+ +  SGC KLK   E
Sbjct: 776 IPTCVGELKALQKLILSGCLKLKEFPE 802



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 100/211 (47%), Gaps = 31/211 (14%)

Query: 646 NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NCS       EFP I + L     DGT I +L   +  L  LV L +  CK LE +P  +
Sbjct: 725 NCSNF----KEFPLIPENLEALYLDGTVISQLPDNVVNLKRLVLLNMKDCKMLENIPTCV 780

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPA--SIELLSGNILSNL 759
             LK L  L LSG  K +EFPEI  S  ++L   L+GT+I+ +P   S++ L       L
Sbjct: 781 GELKALQKLILSGCLKLKEFPEINKSSLKIL--LLDGTSIKTMPQLPSVQYLC------L 832

Query: 760 KDCKNLKSLPSTINGLR-------SLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRP 812
                +  LP  IN L        +L+ +   GCS LKNV   L ++ S      ++N  
Sbjct: 833 SRNDQISYLPVGINQLTYVPELPPTLQYLDAHGCSSLKNVATPLARIVSTVQNHCTFNFT 892

Query: 813 KMQNDFDCVEQSAVETVTKLA--KAELLRDS 841
              N    +EQ+A E +T  A  K +LL D+
Sbjct: 893 NCGN----LEQAAKEEITSYAQRKCQLLPDA 919


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 145/309 (46%), Gaps = 39/309 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL+G     +   I  L  L+ L L   K L  L   I  LK LR L+LS
Sbjct: 98  IGELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNK-LERLSPEIGRLKNLRELDLS 156

Query: 61  GC----------------------SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           G                       +KL++ P  +  ++DL +LYL+G ++  +P +IE L
Sbjct: 157 GNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENL 216

Query: 99  PG-LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
              L  LYLN  K L  LP  I  L +L  L+L+   KLE +P  +G++++L EL ++G 
Sbjct: 217 KDRLWYLYLNGNK-LKTLPPEIGELVNLGILHLNDN-KLERLPPEIGRLKNLRELGLNGN 274

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNE---PP--ASASWHLHLPFNLLGKSSCPVALMLPSL 212
            +     +I  +K L+ LY +G      PP      W L L  N       P     P +
Sbjct: 275 NLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLP-----PEI 329

Query: 213 TGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
             +  L  L L+D       +PS+I  L +L+ L+L+ N    LP  I+ L NL EL+L 
Sbjct: 330 GELEGLYTLYLNDNEF--ETLPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLRELDLS 387

Query: 273 DCKRLQSLP 281
             K L++LP
Sbjct: 388 GNK-LETLP 395



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 94/169 (55%), Gaps = 4/169 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L  L+L+   +  +P  I  L  L  L L G  NL +LP TI  LK L+ L L+
Sbjct: 237 IGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNG-NNLEALPETIRELKKLQYLYLN 295

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +KLK  P  +  ++ L  L+L+G  +  +P  I  L GL  LYLN+ +    LPS I 
Sbjct: 296 G-NKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELEGLYTLYLNDNE-FETLPSEIG 353

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            LK+L+ L+LSG  KLE +P  + ++++L ELD+SG  +    S I  M
Sbjct: 354 KLKNLRHLHLSGN-KLERLPYVIAELKNLRELDLSGNKLETLPSYIVRM 401



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 4/123 (3%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L +L LNG  NLE LP TI  LK L  L L+G +K +  P        LL +HL G 
Sbjct: 263 LKNLRELGLNG-NNLEALPETIRELKKLQYLYLNG-NKLKTLPPEIGELKWLLVLHLNGN 320

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            +  LP  I  L G     L D +  ++LPS I  L++LR ++ SG +KL+ +   + ++
Sbjct: 321 KLERLPPEIGELEGLYTLYLNDNE-FETLPSEIGKLKNLRHLHLSG-NKLERLPYVIAEL 378

Query: 800 ESL 802
           ++L
Sbjct: 379 KNL 381



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 123/276 (44%), Gaps = 49/276 (17%)

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           KN+  L   I  LK L  L+LS   +L ++P  +G++ESL+ L ++G      +  I  +
Sbjct: 66  KNITSLHDVIEELKYLCCLDLS-RKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGEL 124

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
           KNL+                +L L  N L + S       P +  + +L +LDLS   L 
Sbjct: 125 KNLK----------------YLDLYDNKLERLS-------PEIGRLKNLRELDLSGNKL- 160

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ- 288
              +PS+I  L +L  L+LN N    LP  I  L +L  L L +   L++LP+   NL+ 
Sbjct: 161 -RTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYL-NGNNLEALPETIENLKD 218

Query: 289 ---FVRANG---------CSSLVTLFGALKLCRSKYTIINC-IDSLKLLRKNGLAISML- 334
              ++  NG            LV L G L L  +K   +   I  LK LR+ GL  + L 
Sbjct: 219 RLWYLYLNGNKLKTLPPEIGELVNL-GILHLNDNKLERLPPEIGRLKNLRELGLNGNNLE 277

Query: 335 ------REYLELQAVSDPGHKLSIVFPGSQIPKWFM 364
                 RE  +LQ +   G+KL  + P     KW +
Sbjct: 278 ALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLL 313



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 5/153 (3%)

Query: 653 EADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL 712
           E  E   +  +  +G +   LS  I  L  L  L L   K LERL   I  LK L  L+L
Sbjct: 97  EIGELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNK-LERLSPEIGRLKNLRELDL 155

Query: 713 SGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
           SG +K R  P        L  +HL    +  LP  I  L  ++     +  NL++LP TI
Sbjct: 156 SG-NKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLK-DLWRLYLNGNNLEALPETI 213

Query: 773 NGLRS-LRMMYPSGCSKLKNVTETLGKVESLEV 804
             L+  L  +Y +G +KLK +   +G++ +L +
Sbjct: 214 ENLKDRLWYLYLNG-NKLKTLPPEIGELVNLGI 245



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 15/182 (8%)

Query: 633 RQTVRRQSPQ--EPGNCSRLWEEADEFPDIVQVLSDGTDIRELSL----------AIELL 680
           R+ +R   P+  E  +   L+   +EF  +  V+ +  +++ L L           I  L
Sbjct: 88  RKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRL 147

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
             L +L L+G K L  LP  I  L  L  L+L+     R  PEI   +D L  ++L G  
Sbjct: 148 KNLRELDLSGNK-LRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKD-LWRLYLNGNN 205

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  LP +IE L   +     +   LK+LP  I  L +L +++ +  +KL+ +   +G+++
Sbjct: 206 LEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLND-NKLERLPPEIGRLK 264

Query: 801 SL 802
           +L
Sbjct: 265 NL 266


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 12/278 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL    +T  P  I  L  L+ L L     + ++P  I  L+ L++L L 
Sbjct: 62  IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNL-SANQIKTIPKEIEKLQKLQSLYLP 120

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L L    I  +P  IE L  L+ LYL++ + L  LP  I 
Sbjct: 121 N-NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQ-LTTLPQEIE 178

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L+ L++L L    +L  +P  +G++++L+ L ++   +      I  ++NL+ LY   +
Sbjct: 179 KLQKLESLGLDNN-QLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSN 237

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +   +   LP   G + +L  L LS+  L    IP +I
Sbjct: 238 QLTTIPKEIGQLQNLQMLDLGNNQLTI---LPKEIGKLQNLQWLYLSNNQL--TTIPKEI 292

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             L +L+ELYL+ N   T+P  I  L NL+EL L + +
Sbjct: 293 GQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQ 330



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 29/275 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL    +T +P  I  L  L+ L L     + +LP  I  L+ L+ L L 
Sbjct: 108 IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNL-SYNQIKTLPQEIEKLQKLQWLYLH 166

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  ++ L  L LD   +  +P  I  L  L++L+LN  + L  LP  I 
Sbjct: 167 K-NQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQ-LTTLPQEIG 224

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P  +G++++L+ LD+    +      I  ++NL+ LY S  
Sbjct: 225 HLQNLQDLYLV-SNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNN 283

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               ++ P       +  + +L +L LS+  L    IP +I  L
Sbjct: 284 ------------------QLTTIP-----KEIGQLQNLQELYLSNNQL--TTIPKEIGQL 318

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +L+ELYL+ N  +T+P  I  L NL+ L L + +
Sbjct: 319 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQ 353



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 30/237 (12%)

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L+ LP  I  LK+L+ L+LS   ++  +P  + ++++L+ LD+    +      I  ++N
Sbjct: 9   LIILPKEIRQLKNLQMLDLSDN-QIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQN 67

Query: 172 LRSLYFSGCNEPP--------ASASWHLHLPFNLLGKSSCPV-------ALMLPS--LTG 214
           L+ LY S                  W L+L  N +      +       +L LP+  LT 
Sbjct: 68  LQELYLSNNQLTTFPKEIGKLQKLQW-LNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTT 126

Query: 215 ----VCSLTKLDLSDCGLGE-AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
               +  L KL   +    +   +P +I+ L  L+ LYL++N   TLP  I  L  LE L
Sbjct: 127 LPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESL 186

Query: 270 ELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
            L D  +L +LPQ    LQ     F+  N  ++L    G L+  +  Y + N + ++
Sbjct: 187 GL-DNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTI 242


>gi|168042655|ref|XP_001773803.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674918|gb|EDQ61420.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 357

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 153/301 (50%), Gaps = 25/301 (8%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +T +P+ ++ LT L  L + GC +L+SLP  + +L  L TL +  CS L   P  + ++ 
Sbjct: 1   MTSLPNELDNLTSLTTLIISGCSSLTSLPNELGNLTSLTTLCVQTCSSLTSLPNELGNLT 60

Query: 77  DLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            L+ L ++  +S+  + + +  L  L  L ++EC +L  LP+ ++ L SL TLN+SGC  
Sbjct: 61  SLTTLDVNECSSLTSLANELGNLTSLTTLDVSECSSLTSLPNELDNLTSLTTLNISGCSS 120

Query: 136 LENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
           + ++P+ +G + SL + D+S   + I  P + +  + +L +LY   C       S    L
Sbjct: 121 MTSLPNEVGNLTSLTKFDISYCSSLISLP-NELGNLTSLTTLYMCNC-------SSLTSL 172

Query: 194 PFNL--------LGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           P  L        L  S C     LP+ L+ + SL + D+S+C     ++P+++ NL SL 
Sbjct: 173 PNELGNLTSLATLNISYCSSMTSLPNELSNLTSLIEFDVSECS-NLTSLPNEVGNLTSLT 231

Query: 245 ELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVT 300
            L ++  ++  +L   +  L +L  L +  C  L SLP    N   L  +  + CSSL  
Sbjct: 232 TLNISYCSSLTSLSNELGNLTSLTTLYMCRCSSLTSLPNELGNFTSLTTLNISYCSSLTL 291

Query: 301 L 301
           L
Sbjct: 292 L 292



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 144/282 (51%), Gaps = 6/282 (2%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+T + + +  LT L  L +  C +L+SLP  + +L  L TL +SGCS +   P  V ++
Sbjct: 72  SLTSLANELGNLTSLTTLDVSECSSLTSLPNELDNLTSLTTLNISGCSSMTSLPNEVGNL 131

Query: 76  EDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+K  +   +S+  +P+ +  L  L  LY+  C +L  LP+ +  L SL TLN+S C 
Sbjct: 132 TSLTKFDISYCSSLISLPNELGNLTSLTTLYMCNCSSLTSLPNELGNLTSLATLNISYCS 191

Query: 135 KLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            + ++P+ L  + SL E DVS  + +    + +  + +L +L  S C+   + ++   +L
Sbjct: 192 SMTSLPNELSNLTSLIEFDVSECSNLTSLPNEVGNLTSLTTLNISYCSSLTSLSNELGNL 251

Query: 194 P-FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NR 250
                L    C     LP+ L    SLT L++S C      +P+++ NL SL  LY+   
Sbjct: 252 TSLTTLYMCRCSSLTSLPNELGNFTSLTTLNISYCS-SLTLLPNELGNLTSLTTLYMWGC 310

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           ++  +LP  +  L +L E+++ +C  L S P    NL  + +
Sbjct: 311 SSMTSLPNDLGNLTSLIEVDISECSSLTSSPNELGNLTSLTS 352



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 14/172 (8%)

Query: 646 NCSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NCS L    +E  ++  +    +S  + +  L   +  L  L++  ++ C NL  LP  +
Sbjct: 165 NCSSLTSLPNELGNLTSLATLNISYCSSMTSLPNELSNLTSLIEFDVSECSNLTSLPNEV 224

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS--- 757
             L  L+TLN+S  S          +   L  +++   +++  LP  +    GN  S   
Sbjct: 225 GNLTSLTTLNISYCSSLTSLSNELGNLTSLTTLYMCRCSSLTSLPNEL----GNFTSLTT 280

Query: 758 -NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLS 807
            N+  C +L  LP+ +  L SL  +Y  GCS + ++   LG + SL EV +S
Sbjct: 281 LNISYCSSLTLLPNELGNLTSLTTLYMWGCSSMTSLPNDLGNLTSLIEVDIS 332



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 11/215 (5%)

Query: 597 CINSMVSQAKAISQQGQFVKMISVD----SGCMSCYKKWGRQTVRRQSPQEPGNCSRLWE 652
           C+ +  S     ++ G    + ++D    S   S   + G  T    +  +   CS L  
Sbjct: 42  CVQTCSSLTSLPNELGNLTSLTTLDVNECSSLTSLANELGNLT--SLTTLDVSECSSLTS 99

Query: 653 EADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
             +E  ++  +    +S  + +  L   +  L  L +  ++ C +L  LP  +  L  L+
Sbjct: 100 LPNELDNLTSLTTLNISGCSSMTSLPNEVGNLTSLTKFDISYCSSLISLPNELGNLTSLT 159

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKDCKNLKS 767
           TL +   S     P    +   L  +++   +++  LP  +  L+  I  ++ +C NL S
Sbjct: 160 TLYMCNCSSLTSLPNELGNLTSLATLNISYCSSMTSLPNELSNLTSLIEFDVSECSNLTS 219

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           LP+ +  L SL  +  S CS L +++  LG + SL
Sbjct: 220 LPNEVGNLTSLTTLNISYCSSLTSLSNELGNLTSL 254



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  L ++GC +L  LP  +  L  L+TL +   S     P    +   L  + + E 
Sbjct: 11  LTSLTTLIISGCSSLTSLPNELGNLTSLTTLCVQTCSSLTSLPNELGNLTSLTTLDVNEC 70

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  L   +  L+     ++ +C +L SLP+ ++ L SL  +  SGCS + ++   +G 
Sbjct: 71  SSLTSLANELGNLTSLTTLDVSECSSLTSLPNELDNLTSLTTLNISGCSSMTSLPNEVGN 130

Query: 799 VESL 802
           + SL
Sbjct: 131 LTSL 134


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 138/304 (45%), Gaps = 43/304 (14%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P  +  LT LE L L     L +LP  I  L CL+ L++S C +L   P+ V ++  L 
Sbjct: 314 LPPEVGRLTQLEWLELSQ-NPLQTLPADIRQLTCLKHLDMSYC-QLTLLPREVGALTQLE 371

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS-------- 131
            L +    +  + + ++ +  +E   L++C+ L  LP  I  L  L+ L+LS        
Sbjct: 372 CLVMIRNPLQMLTTDVQHIINIESFNLSQCQ-LTTLPPEIGRLAHLRWLDLSYNPLQILP 430

Query: 132 --------------GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
                           CKL  +P  LGK+  +E LD+S   ++   + +  + N++ L  
Sbjct: 431 PNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDM 490

Query: 178 SGC---NEPP-----ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
           S C   + PP         W LHL       SS P+  + P +  + ++T LD+S+C L 
Sbjct: 491 SECKLHSIPPEVGKLTQLEW-LHL-------SSNPLKTLPPEVGQLANVTHLDMSECKL- 541

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
              +P ++  L  LK L L+ N    LPA I  L N++ L+L  C+     P+I    Q 
Sbjct: 542 -RTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQL 600

Query: 290 VRAN 293
            R N
Sbjct: 601 ERLN 604



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 33/300 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L+  ++T VP+ +  L  L+ L L   +N+  LP  +S L  +R L+L+
Sbjct: 65  LTKLQNLKVLNLNDCNLTTVPAVVMKLPQLQTLILSNNENII-LPDEMSGLTNIRVLKLN 123

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK---------N 111
             + +   P +V  +  L  L L   ++  + + I LL  +E L L++C           
Sbjct: 124 K-TNMVTVPTVVWRLTHLHTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHTLPLEIWR 182

Query: 112 LVRL-------------PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           L++L             P+ +  L ++K LNLS  CKL  +P  +G +  LE LD+ G  
Sbjct: 183 LIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLS-YCKLRILPPEIGNLTQLEWLDLCGNQ 241

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNE---PPASASWHLHLPFNLLGKSSCPVALMLPSLTGV 215
           ++     +  + N++ LY   CN    PP             LG SS  +  +   +  +
Sbjct: 242 LQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRL---TQLQWLGLSSNNLQTLPSEIGQL 298

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            ++   DLS C L    +P ++  L  L+ L L++N   TLPA I  L  L+ L++  C+
Sbjct: 299 TNIKHFDLSLCKL--RTLPPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQ 356



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 8/242 (3%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
           +  LP  +  ++ L  L+L+G  K  K P  +  +++L  L L+  ++  VP+ +  LP 
Sbjct: 35  VEQLPEELYGIEELEALDLTG-KKGIKLPNELTKLQNLKVLNLNDCNLTTVPAVVMKLPQ 93

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           L+ L L+  +N++ LP  ++GL +++ L L+    +  VP  + ++  L  L++    + 
Sbjct: 94  LQTLILSNNENII-LPDEMSGLTNIRVLKLNKT-NMVTVPTVVWRLTHLHTLELGSNTLN 151

Query: 161 RPTSSIFLMKNLRSLYFSGCNEPPASAS-WHLHLPFNLLGKSSCPVALMLPSLTGVCSLT 219
              + I L+ N+  L  S CN        W L +    L     P+ ++   +  + ++ 
Sbjct: 152 VLNAEIGLLSNMEHLNLSKCNLHTLPLEIWRL-IQLRWLDVRFNPIQMLPAGVGQLTNIK 210

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
            L+LS C L    +P +I NL  L+ L L  N   TLP  +  L N++ L L  C  + +
Sbjct: 211 HLNLSYCKL--RILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCN-MHT 267

Query: 280 LP 281
           LP
Sbjct: 268 LP 269



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 13/284 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L G    ++P+ +  L  L++L L  C NL+++P  +  L  L+TL LS
Sbjct: 42  LYGIEELEALDLTGKKGIKLPNELTKLQNLKVLNLNDC-NLTTVPAVVMKLPQLQTLILS 100

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
               +   P  ++ + ++  L L+ T++  VP+ +  L  L  L L     L  L + I 
Sbjct: 101 NNENII-LPDEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHLHTLELGS-NTLNVLNAEIG 158

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +++ LNLS C  L  +P  + ++  L  LDV    I+   + +  + N++ L  S C
Sbjct: 159 LLSNMEHLNLSKC-NLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYC 217

Query: 181 NE---PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                PP   +       +L G     +   +  LT V     L L  C +    +P ++
Sbjct: 218 KLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNV---KHLYLHSCNM--HTLPPEV 272

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
             L  L+ L L+ NN  TLP+ I  L N++  +L  CK L++LP
Sbjct: 273 GRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCK-LRTLP 315



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 81/163 (49%), Gaps = 6/163 (3%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           LT ++ L +  CK L S+P  +  L  L  L LS  + LK  P  V  + +++ L +   
Sbjct: 482 LTNVKHLDMSECK-LHSIPPEVGKLTQLEWLHLSS-NPLKTLPPEVGQLANVTHLDMSEC 539

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
            +  +P  +  L  L+ L L+    L  LP+ I  L +++ L+LS C +L  +P  +GK+
Sbjct: 540 KLRTLPPEVGRLEQLKWLNLSS-NPLQALPAQIGQLNNIQNLDLSSC-ELTTLPPEIGKL 597

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCNEPPASA 187
             LE L+VS   ++   + I  + N+  L  S    ++PPA  
Sbjct: 598 TQLERLNVSDNPLQTLPAEIVHLTNISHLKISTRTLSKPPAEV 640


>gi|3860165|gb|AAC72978.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1221

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 155/328 (47%), Gaps = 38/328 (11%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L +L L + +S+ E+PSSIE LT L++L L  C +L  LP   ++ K L  L L
Sbjct: 718  LSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVELPSFGNATK-LEILNL 776

Query: 60   SGCSKLKKFPQIV-------------------ASMEDLSKLY----LDGTSIAEVPSSIE 96
              CS L K P  +                    ++E+ + L+    L+ +S+ E+P SI 
Sbjct: 777  ENCSSLVKLPPSINANNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIG 836

Query: 97   LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
                L+ L    C +LV+LPSSI  + +L+   LS C  L  +P ++G +  L  L + G
Sbjct: 837  TATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRG 896

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF-NLLGKS--SCPVALMLPSLT 213
             +      +   +K+L +L    C+   +      H+ +  L+G +    P+++M  S  
Sbjct: 897  CSKLETLPTNINLKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPLSIMSWSPL 956

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
                ++  +     L E     DI     + EL L++ +   +P  +  +  L  L L +
Sbjct: 957  AHFQISYFE----SLKEFPHALDI-----ITELQLSK-DIQEVPPWVKRMSRLRALRLNN 1006

Query: 274  CKRLQSLPQIPPNLQFVRANGCSSLVTL 301
            C  L SLPQ+P +L ++ A+ C SL  L
Sbjct: 1007 CNNLVSLPQLPDSLAYLYADNCKSLERL 1034



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 39/283 (13%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           LP T +S + L  L++S  SKL+K  +    + +L  + L  +S  +   ++     LE 
Sbjct: 669 LPSTFNS-EFLVELDMS-FSKLQKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEE 726

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRR 161
           L L  C +LV LPSSI  L SL+ L+L  C  L  +P + G    LE L++   +  ++ 
Sbjct: 727 LKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVELP-SFGNATKLEILNLENCSSLVKL 785

Query: 162 PTSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCS 217
           P S      NL+ L  + C+   E PA  +       NLL   +C   + LP S+    +
Sbjct: 786 PPS--INANNLQELSLTNCSRVVELPAIENATNLWKLNLL---NCSSLIELPLSIGTATN 840

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGL------------- 263
           L  LD   C      +PS I ++ +L+  YL N +N V LP+SI  L             
Sbjct: 841 LKHLDFRGCS-SLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLLMRGCSK 899

Query: 264 -------LNLEELE---LEDCKRLQSLPQIPPNLQFVRANGCS 296
                  +NL+ L    L DC RL+S P+I  +++++R  G +
Sbjct: 900 LETLPTNINLKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTA 942



 Score = 45.8 bits (107), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 12/168 (7%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGT--DIRELSLAIEL-LFG----LVQLTLNGCKNLERLP 698
           NCS L E     P  ++ L+     D+   S  +EL  FG    L  L L  C +L +LP
Sbjct: 731 NCSSLVE----LPSSIEKLTSLQILDLHRCSSLVELPSFGNATKLEILNLENCSSLVKLP 786

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSN 758
            +I+A   L  L+L+  S+  E P I ++ +      L  +++  LP SI   +     +
Sbjct: 787 PSINA-NNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKHLD 845

Query: 759 LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRL 806
            + C +L  LPS+I  + +L + Y S CS L  +  ++G +  L + L
Sbjct: 846 FRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTLLL 893


>gi|13517480|gb|AAK28811.1|AF310966_1 resistance-like protein P-B [Linum usitatissimum]
          Length = 1211

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 131/529 (24%), Positives = 224/529 (42%), Gaps = 84/529 (15%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            S+ EVP  ++ LT L  L +  CKNL  LP  + S K L+ + + G   + + P+I +  
Sbjct: 727  SLVEVPFHVQYLTKLVTLDINVCKNLKRLPPKLDS-KLLKHVRMQGLG-ITRCPEIDS-- 782

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
             +L    L  TS+ E+PS+I  +    +L L+  KN+ + P     LK L TL+ +    
Sbjct: 783  RELEIFDLRFTSLGELPSAIYNVKQNGVLRLH-GKNITKFPGITTILK-LFTLSRT---- 836

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHLHL 193
                        S+ E+D++    +  TS   L+   ++L+ +G    E   ++ W++  
Sbjct: 837  ------------SIREIDLADYHQQHQTSDGLLLPRFQNLWLTGNRQLEVLPNSIWNMIS 884

Query: 194  PFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
                +G+S  P+   LP ++  + +LT L +  C     +IP+ I NL SL+ L L    
Sbjct: 885  EELYIGRS--PLIESLPEISEPMSTLTSLHVF-CCRSLTSIPTSISNLRSLRSLRLVETG 941

Query: 253  FVTLPASISGLLNLEELELEDCKRLQ------------------------SLPQIPPNLQ 288
              +LP+SI  L  L  + L DCK L+                        SLP++PPNL+
Sbjct: 942  IKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMSGCESIPSLPELPPNLK 1001

Query: 289  FVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGH 348
             +    C SL     AL     K   +N I   +  + +    +       + A   P +
Sbjct: 1002 ELEVRDCKSL----QALPSNTCKLLYLNRIYFEECPQVDQTIPAEFMANFLVHASLSPSY 1057

Query: 349  KLSIVFPGSQIPKWFMYQN----EGSSITVTRPSYLYNVNK----VVGFAICCVFQVPKH 400
            +  +   GS++PKWF Y++    + S++ V  P  L N +     + G A  CV     +
Sbjct: 1058 ERQVRCSGSELPKWFSYRSMEDEDCSTVKVELP--LANDSPDHPMIKGIAFGCV-----N 1110

Query: 401  STGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFG--HVVSDHLWLLFLPRHGHNWQFES 458
            S+  Y  +S+      C +  +    ++      G     S+ +WL+F      N    S
Sbjct: 1111 SSDPY--YSWMRMGCRCEVGNTTVASWVSNEKVMGPEEKSSEKVWLVF------NKNLSS 1162

Query: 459  NLIRLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLN 507
                 S  S  D  W VK  GF   +     ++D+   +  +   C ++
Sbjct: 1163 T---GSMGSEEDEAWYVKYGGFDVSFNFYFLDYDDEIIKKVKIKRCGVS 1208



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 4/175 (2%)

Query: 7    LSDLYLDGTSITEV-PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
              +L+L G    EV P+SI  +   EL   +    + SLP     +  L +L +  C  L
Sbjct: 861  FQNLWLTGNRQLEVLPNSIWNMISEELYIGRS-PLIESLPEISEPMSTLTSLHVFCCRSL 919

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
               P  ++++  L  L L  T I  +PSSI  L  L  + L +CK+L  +P+SI+ L  L
Sbjct: 920  TSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKL 979

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             T ++SGC  + ++P+    ++ LE  D        P+++  L+  L  +YF  C
Sbjct: 980  GTFSMSGCESIPSLPELPPNLKELEVRDCKSLQA-LPSNTCKLLY-LNRIYFEEC 1032



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +++++ L  L L  T I  +PSSI  L  L  + L+ CK+L S+P +I  L  L T  +S
Sbjct: 926  ISNLRSLRSLRLVETGIKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMS 985

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC 109
            GC  +   P++  ++++L     D  S+  +PS+   L  L  +Y  EC
Sbjct: 986  GCESIPSLPELPPNLKELE--VRDCKSLQALPSNTCKLLYLNRIYFEEC 1032



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%)

Query: 694  LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
            +E LP     +  L++L++         P   S+   L  + L  T I+ LP+SI  L  
Sbjct: 895  IESLPEISEPMSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQ 954

Query: 754  NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
                 L+DCK+L+S+P++I+ L  L     SGC  + ++ E    ++ LEVR
Sbjct: 955  LHSICLRDCKSLESIPNSIHKLSKLGTFSMSGCESIPSLPELPPNLKELEVR 1006



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 26/122 (21%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I+ L  +I  L  L  + L  CK+LE +P +I  L  L T ++SG       PE    
Sbjct: 940  TGIKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFSMSGCESIPSLPE---- 995

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                            LP +++ L       ++DCK+L++LPS    L  L  +Y   C 
Sbjct: 996  ----------------LPPNLKEL------EVRDCKSLQALPSNTCKLLYLNRIYFEECP 1033

Query: 788  KL 789
            ++
Sbjct: 1034 QV 1035



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+   ++ L  LV L +N CKNL+RLP  + + K L  + + GL   R  PEI S   ++
Sbjct: 730 EVPFHVQYLTKLVTLDINVCKNLKRLPPKLDS-KLLKHVRMQGLGITR-CPEIDSRELEI 787

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLR 776
            ++    T++  LP++I  +  N +  L   KN+   P     L+
Sbjct: 788 FDLRF--TSLGELPSAIYNVKQNGVLRLHG-KNITKFPGITTILK 829


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 139/281 (49%), Gaps = 32/281 (11%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++++L  L L    +T +P  I  L  L+ L L+G + L++LP  I +L+ L+TL+L G 
Sbjct: 148 NLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQ-LATLPEEIGNLQNLQTLDLEG- 205

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           ++L   P+ +  +++L KLYL    +  +P  +  L  L+ LYL   + L  LP  I  L
Sbjct: 206 NQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNR-LTTLPKEIEDL 264

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           ++LK L+L G  +L  +P  +GK+++L+EL +    +      I  ++NL+ L  +    
Sbjct: 265 QNLKILSL-GSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQ- 322

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLH 241
                       F  L K              + +L KL     G  +   +P +I NL 
Sbjct: 323 ------------FTTLPKE-------------IWNLQKLQKLSLGRNQLTTLPEEIWNLQ 357

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +LK L L  N   TLP  I  L NL++L+LE   +L +LP+
Sbjct: 358 NLKTLDLEGNQLATLPEEIGNLQNLQKLDLE-GNQLTTLPK 397



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 152/311 (48%), Gaps = 25/311 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L    +T +P  I  L  L+ L L   + L++L   I +L+ L+TL+L 
Sbjct: 54  IGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQ-LTTLSKEIGNLQNLQTLDL- 111

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ + ++++L  L L    +  +P  I  L  L+ L L   + L  LP  I 
Sbjct: 112 GRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQ-LTTLPEEIG 170

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L++L+TL+L G  +L  +P+ +G +++L+ LD+ G  +      I  ++NL+ LY   +
Sbjct: 171 NLQNLQTLDLEGN-QLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNN 229

Query: 179 GCNEPPASAS-----WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AA 232
                P           L+L  N L  ++ P          +  L  L +   G  +   
Sbjct: 230 RLTTLPKEVGKLQNLQELYLYNNRL--TTLPKE--------IEDLQNLKILSLGSNQLTT 279

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR- 291
           +P ++  L +L+ELYL  N   TLP  I  L NL++L L +  +  +LP+   NLQ ++ 
Sbjct: 280 LPKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNL-NSNQFTTLPKEIWNLQKLQK 338

Query: 292 -ANGCSSLVTL 301
            + G + L TL
Sbjct: 339 LSLGRNQLTTL 349



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 9/212 (4%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP  I  L++L+ L+LS   +L  +P  +GK+++L++LD+S   +      I  ++NL+ 
Sbjct: 27  LPKEIGKLQNLRDLDLS-SNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQK 85

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
           L  +       S           L      +  +   +  + +L  LDL    L    +P
Sbjct: 86  LNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQL--TTLP 143

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR--- 291
            +I NL +L+ L L RN   TLP  I  L NL+ L+LE   +L +LP+   NLQ ++   
Sbjct: 144 EEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLE-GNQLATLPEEIGNLQNLQTLD 202

Query: 292 --ANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
              N  ++L    G L+  +  Y   N + +L
Sbjct: 203 LEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTL 234


>gi|227438243|gb|ACP30611.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1050

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 163/324 (50%), Gaps = 36/324 (11%)

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           S   K+ + PQ +  ++++S        + EVP  +   P LE LYL +C++L  LPSSI
Sbjct: 625 SELEKMWEGPQPLKYLKNMS--LWRSKKLKEVPD-LSKAPNLEELYLADCQSLEMLPSSI 681

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK+LKTLN+  C KLE +P  +  +ESL  L + G ++ R    I    ++ SL  + 
Sbjct: 682 RYLKNLKTLNMEECSKLEFLPTNIN-LESLSNLTLYGCSLIRSFPDISHNISVLSLENTA 740

Query: 180 CNEPPASASWHLHLPFNLLG--KSSC-PVALMLPSLTGVCSLTKLDLSDC-GLGEAAIPS 235
             E P    W +     L G   S C  ++ + P+++ +  L  +D S C  L E +   
Sbjct: 741 IEEVP----WWIEKMTGLTGLFMSGCGKLSRISPNISKLKHLEDVDFSLCYALTEDSWQD 796

Query: 236 D---IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI-PPNLQFVR 291
           D   +   + + +L ++ N F  LP S+   +  +EL + +C++L SLP++   +L+ +R
Sbjct: 797 DPQVVPAPNPIGDLDMSDNTFTRLPHSLVS-IKPQELNIGNCRKLVSLPELQTSSLKILR 855

Query: 292 ANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLS 351
           A  C SL ++     L R+  TI++ I+  K L +  L  S + +Y+             
Sbjct: 856 AQDCESLESIS---HLFRNPETILHFINCFK-LEQECLIRSSVFKYM------------- 898

Query: 352 IVFPGSQI-PKWFMYQNEGSSITV 374
            + PG Q+ P++F ++  GS +T+
Sbjct: 899 -ILPGRQVPPEYFTHRASGSYLTI 921



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 10/176 (5%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++   +L +LYL D  S+  +PSSI  L  L+ L ++ C  L  LP  I +L+ L  L L
Sbjct: 657 LSKAPNLEELYLADCQSLEMLPSSIRYLKNLKTLNMEECSKLEFLPTNI-NLESLSNLTL 715

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCS ++ FP I     ++S L L+ T+I EVP  IE + GL  L+++ C  L R+  +I
Sbjct: 716 YGCSLIRSFPDI---SHNISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNI 772

Query: 120 NGLKSLKTLNLSGCCKL-----ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
           + LK L+ ++ S C  L     ++ P  +     + +LD+S     R   S+  +K
Sbjct: 773 SKLKHLEDVDFSLCYALTEDSWQDDPQVVPAPNPIGDLDMSDNTFTRLPHSLVSIK 828



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 8/149 (5%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           ++S L L+ T+I EVP  IE +TGL  L + GC  LS +   IS LK L  ++ S C  L
Sbjct: 730 NISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNISKLKHLEDVDFSLCYAL 789

Query: 66  -----KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
                +  PQ+V +   +  L +   +   +P S+  +   E L +  C+ LV LP    
Sbjct: 790 TEDSWQDDPQVVPAPNPIGDLDMSDNTFTRLPHSLVSIKPQE-LNIGNCRKLVSLPELQT 848

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESL 149
              SLK L    C  LE++       E++
Sbjct: 849 S--SLKILRAQDCESLESISHLFRNPETI 875



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 12/155 (7%)

Query: 657 FPDI---VQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNL 712
           FPDI   + VLS + T I E+   IE + GL  L ++GC  L R+   IS LK+L  ++ 
Sbjct: 724 FPDISHNISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNISKLKHLEDVDF 783

Query: 713 S---GLSK--FREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
           S    L++  +++ P++  + + + ++ +       LP S+  +    L N+ +C+ L S
Sbjct: 784 SLCYALTEDSWQDDPQVVPAPNPIGDLDMSDNTFTRLPHSLVSIKPQEL-NIGNCRKLVS 842

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           LP       SL+++    C  L++++      E++
Sbjct: 843 LPELQTS--SLKILRAQDCESLESISHLFRNPETI 875



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L +L L  C++LE LP +I  LK L TLN+   SK  EF     + + L  + L G + I
Sbjct: 663 LEELYLADCQSLEMLPSSIRYLKNLKTLNMEECSKL-EFLPTNINLESLSNLTLYGCSLI 721

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           R  P     +S NI     +   ++ +P  I  +  L  ++ SGC KL  ++  + K++ 
Sbjct: 722 RSFPD----ISHNISVLSLENTAIEEVPWWIEKMTGLTGLFMSGCGKLSRISPNISKLKH 777

Query: 802 LE 803
           LE
Sbjct: 778 LE 779



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLS 752
           LE++      LKYL  ++L    K +E P+++ + + L E++L +  ++  LP+SI  L 
Sbjct: 627 LEKMWEGPQPLKYLKNMSLWRSKKLKEVPDLSKAPN-LEELYLADCQSLEMLPSSIRYLK 685

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
                N+++C  L+ LP+ IN L SL  +   GCS +++  +
Sbjct: 686 NLKTLNMEECSKLEFLPTNIN-LESLSNLTLYGCSLIRSFPD 726


>gi|168067847|ref|XP_001785816.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662540|gb|EDQ49380.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 307

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 1/171 (0%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K+L+ LYL  + IT +P+ I  L  LE L+L GC  L  LP  I  L  L+ L L 
Sbjct: 104 IGNLKNLTHLYLGQSGITSLPAEIGKLRSLEDLSLTGCVRLEKLPPQIGQLTSLQRLNLG 163

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            C+ +K+ P     M  L KL L+  T++A +P  +  L  L+ L L+  K L  LP+ I
Sbjct: 164 SCTGIKELPSEFGGMISLQKLVLNSCTALARLPDELFDLVNLQSLELDYMKLLAHLPAEI 223

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMK 170
             L+SL+ L+L+ C +L  +P  +G + +L+ L++ G    +P   + ++K
Sbjct: 224 GNLRSLQRLSLNCCTRLNRLPPEIGSLPALQVLNLVGCTGLKPELPMEILK 274



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 2/176 (1%)

Query: 2   ASMKDLSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           A MK+L    L+   SI  +  SI  L  +  L   GC N+++LP  I +++ L  L L 
Sbjct: 33  ADMKNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGCTNIATLPSEIGNVQTLLKLNLV 92

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C  L + P  + ++++L+ LYL  + I  +P+ I  L  LE L L  C  L +LP  I 
Sbjct: 93  LCKCLVRLPPEIGNLKNLTHLYLGQSGITSLPAEIGKLRSLEDLSLTGCVRLEKLPPQIG 152

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSIFLMKNLRSL 175
            L SL+ LNL  C  ++ +P   G + SL++L + S TA+ R    +F + NL+SL
Sbjct: 153 QLTSLQRLNLGSCTGIKELPSEFGGMISLQKLVLNSCTALARLPDELFDLVNLQSL 208



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 128/278 (46%), Gaps = 30/278 (10%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG- 85
           LTGL  L L GC  L  L    + +K LR   L  C  ++   + +  +  + +L   G 
Sbjct: 11  LTGLLELHLIGCNKLHDLTAEFADMKNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGC 70

Query: 86  TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
           T+IA +PS I  +  L  L L  CK LVRLP  I  LK+L  L L G   + ++P  +GK
Sbjct: 71  TNIATLPSEIGNVQTLLKLNLVLCKCLVRLPPEIGNLKNLTHLYL-GQSGITSLPAEIGK 129

Query: 146 VESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
           + SLE+L ++G   + +    I  + +L+ L    C                  G    P
Sbjct: 130 LRSLEDLSLTGCVRLEKLPPQIGQLTSLQRLNLGSCT-----------------GIKELP 172

Query: 205 VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGL 263
                    G+ SL KL L+ C    A +P ++ +L +L+ L L+    +  LPA I  L
Sbjct: 173 -----SEFGGMISLQKLVLNSCT-ALARLPDELFDLVNLQSLELDYMKLLAHLPAEIGNL 226

Query: 264 LNLEELELEDCKRLQSL-PQIP--PNLQFVRANGCSSL 298
            +L+ L L  C RL  L P+I   P LQ +   GC+ L
Sbjct: 227 RSLQRLSLNCCTRLNRLPPEIGSLPALQVLNLVGCTGL 264



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 4/161 (2%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           C++L +   EF D+  +    L +   IR L  +I  L  + +L  +GC N+  LP  I 
Sbjct: 22  CNKLHDLTAEFADMKNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGCTNIATLPSEIG 81

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC 762
            ++ L  LNL         P    +   L  ++L  + I  LPA I  L      +L  C
Sbjct: 82  NVQTLLKLNLVLCKCLVRLPPEIGNLKNLTHLYLGQSGITSLPAEIGKLRSLEDLSLTGC 141

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             L+ LP  I  L SL+ +    C+ +K +    G + SL+
Sbjct: 142 VRLEKLPPQIGQLTSLQRLNLGSCTGIKELPSEFGGMISLQ 182



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 1/157 (0%)

Query: 649 RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           RL  E     ++  +    + I  L   I  L  L  L+L GC  LE+LP  I  L  L 
Sbjct: 99  RLPPEIGNLKNLTHLYLGQSGITSLPAEIGKLRSLEDLSLTGCVRLEKLPPQIGQLTSLQ 158

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKS 767
            LNL   +  +E P        L ++ L   TA+  LP  +  L       L   K L  
Sbjct: 159 RLNLGSCTGIKELPSEFGGMISLQKLVLNSCTALARLPDELFDLVNLQSLELDYMKLLAH 218

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           LP+ I  LRSL+ +  + C++L  +   +G + +L+V
Sbjct: 219 LPAEIGNLRSLQRLSLNCCTRLNRLPPEIGSLPALQV 255



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 2/125 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L GL++L L GC  L  L    + +K L    L      R           + E+   G 
Sbjct: 11  LTGLLELHLIGCNKLHDLTAEFADMKNLRKFRLENCLSIRNLHRSIGQLASIRELDFSGC 70

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           T I  LP+ I  +   +  NL  CK L  LP  I  L++L  +Y  G S + ++   +GK
Sbjct: 71  TNIATLPSEIGNVQTLLKLNLVLCKCLVRLPPEIGNLKNLTHLY-LGQSGITSLPAEIGK 129

Query: 799 VESLE 803
           + SLE
Sbjct: 130 LRSLE 134


>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
          Length = 495

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 123/265 (46%), Gaps = 52/265 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++  L  L L   ++T +P SI  LT LE L L G  NL++LP +I +L  L+T   S
Sbjct: 250 IGNLTSLKKLNLVSNNLTTLPESIGNLTSLEELYL-GKNNLTTLPESIGNLSRLKTF-FS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +KL   P+ + ++  L +L+L  T +  +P SI  L  LE LYLNE  NL  LP SI 
Sbjct: 308 GSNKLSVLPESIGNLTSLEELFLRETDLTTLPESIGNLISLERLYLNES-NLTALPQSIG 366

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL+ LNL G  +L  +P+++G +  L+ LD+ G  +                     
Sbjct: 367 NLTSLEKLNLDG-NRLTTLPESIGNLTRLDLLDLQGNKL--------------------- 404

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                               ++ P      S+  + SL +  L++  L    +P  I NL
Sbjct: 405 --------------------TTLP-----ESIGNLTSLDEFILNNNAL--TVLPESIGNL 437

Query: 241 HSLKELYLNRNNFVTLPASISGLLN 265
             L  LYL  N+  TLP SI  L N
Sbjct: 438 IKLSALYLFGNDLTTLPESIGSLKN 462



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 104/223 (46%), Gaps = 28/223 (12%)

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +K F  I       S +      I  +P  I  L  LE L L++C     LP SI  L S
Sbjct: 197 VKNFKSIKTYFNVTSIVITKAHPIPYLPEEIGSLSKLEELDLSQC-GFTTLPESIGNLTS 255

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           LK LNL     L  +P+++G + SLEEL +    +     SI  +  L++ +FSG N+  
Sbjct: 256 LKKLNLV-SNNLTTLPESIGNLTSLEELYLGKNNLTTLPESIGNLSRLKT-FFSGSNK-- 311

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                               ++++  S+  + SL +L L +  L    +P  I NL SL+
Sbjct: 312 --------------------LSVLPESIGNLTSLEELFLRETDL--TTLPESIGNLISLE 349

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
            LYLN +N   LP SI  L +LE+L L D  RL +LP+   NL
Sbjct: 350 RLYLNESNLTALPQSIGNLTSLEKLNL-DGNRLTTLPESIGNL 391



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 3/89 (3%)

Query: 204 PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGL 263
           P+  +   +  +  L +LDLS CG     +P  I NL SLK+L L  NN  TLP SI  L
Sbjct: 219 PIPYLPEEIGSLSKLEELDLSQCGF--TTLPESIGNLTSLKKLNLVSNNLTTLPESIGNL 276

Query: 264 LNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            +LEEL L     L +LP+   NL  ++ 
Sbjct: 277 TSLEELYL-GKNNLTTLPESIGNLSRLKT 304



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 23/177 (12%)

Query: 641 PQEPGNCSRLW-------------EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLT 687
           P+  GN SRL              E       + ++    TD+  L  +I  L  L +L 
Sbjct: 293 PESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLTTLPESIGNLISLERLY 352

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
           LN   NL  LP++I  L  L  LNL G ++    PE   +  +L  + L+G  +  LP S
Sbjct: 353 LNES-NLTALPQSIGNLTSLEKLNLDG-NRLTTLPESIGNLTRLDLLDLQGNKLTTLPES 410

Query: 748 IELLSGNILS---NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           I    GN+ S    + +   L  LP +I  L  L  +Y  G + L  + E++G +++
Sbjct: 411 I----GNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFG-NDLTTLPESIGSLKN 462


>gi|357499211|ref|XP_003619894.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494909|gb|AES76112.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1064

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 173/427 (40%), Gaps = 73/427 (17%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI-VASM 75
           +T +P  +  L  LE  + + C++L  +  +I  L  L  L  SGCSKL+ FP + + S+
Sbjct: 613 LTHIPD-VSGLPNLEKCSFQNCESLIRIHSSIGHLNKLEILNASGCSKLEHFPPLQLLSL 671

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           +     + +      + +SI  L  LE+L  + C  L   P     L SLK   +SGC  
Sbjct: 672 KKFKISHCESLKKITIHNSIGHLNKLEILNTSNCLKLEHFPPL--QLPSLKKFEISGCES 729

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L+N P+ L K+ +++++++  T+I     S      L+ L  SG                
Sbjct: 730 LKNFPELLCKMTNIKDIEIYDTSIEELRYSFQNFSELQRLTISGG--------------- 774

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
              GK   P      +     ++  +DL D  L +  +P  +    ++  L L+ N F  
Sbjct: 775 ---GKLRFPKYNDTMNSIVFSNVEHVDLRDNNLSDECLPILLKWFVNVTFLDLSENYFTI 831

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTII 315
           LP  +     L+ L L+ C+ L+ +  IPPNL+ + A+ C SL +               
Sbjct: 832 LPECLGECHRLKHLYLKFCEALEEIRGIPPNLERLCADECYSLSS--------------- 876

Query: 316 NCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS--QIPKWFMYQNEGSSIT 373
               S+++L                Q + +        FP    +IP WF +Q+ G  I 
Sbjct: 877 ---SSIRMLMS--------------QKLHESAGCTHFRFPNKTRRIPDWFEHQSRGGKIA 919

Query: 374 VTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGK 433
                + +     + F    +++   H T   LF     +E E S D         F G+
Sbjct: 920 F----WYHKKLPSISFTFIIIYE---HYTTVKLF--VNGYEKEISFDE--------FTGE 962

Query: 434 FGHVVSD 440
           FG +V D
Sbjct: 963 FGKLVDD 969



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 40/185 (21%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFP-DIVQVLSDGT---DIRELSLAIELLFGLVQLT 687
           G++ VR++SP +PG  SRLW     FP DIV VL D T   +I  + L  +      +  
Sbjct: 493 GKEIVRQESPNKPGERSRLW-----FPDDIVNVLRDNTGTGNIEMIYLEFDSTARETEWD 547

Query: 688 LNGCKNLERLPRTI--------------SALKY-------LSTLNLSGLSKFREFPEITS 726
              CK +  L   I              S+L+Y       L +L+     +F     +T 
Sbjct: 548 GMACKKMTNLKTLIIEYANFSRGPGYLPSSLRYWKWIFCPLKSLSCISSKEFNYMKVLTL 607

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           +  + L  H+    + GLP ++E  S       ++C++L  + S+I  L  L ++  SGC
Sbjct: 608 NYSRYL-THI--PDVSGLP-NLEKCS------FQNCESLIRIHSSIGHLNKLEILNASGC 657

Query: 787 SKLKN 791
           SKL++
Sbjct: 658 SKLEH 662



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI-HLEGTAI 741
           L + +   C++L R+  +I  L  L  LN SG SK   FP +     +  +I H E    
Sbjct: 625 LEKCSFQNCESLIRIHSSIGHLNKLEILNASGCSKLEHFPPLQLLSLKKFKISHCESLKK 684

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +  SI  L+   + N  +C  L+  P     L SL+    SGC  LKN  E L K+ +
Sbjct: 685 ITIHNSIGHLNKLEILNTSNCLKLEHFPPL--QLPSLKKFEISGCESLKNFPELLCKMTN 742

Query: 802 LE 803
           ++
Sbjct: 743 IK 744


>gi|297842711|ref|XP_002889237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297335078|gb|EFH65496.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 753

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 15/225 (6%)

Query: 16  SITEVP-SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           ++ E+P SS+  L  L  L L  CK L +LP  I+ LK LR L L GCS L++FP I  +
Sbjct: 432 NLVEIPESSLTQLNKLVHLKLSDCKKLRNLPNNIN-LKSLRFLHLDGCSCLEEFPFISET 490

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           +E   KL L+ T+I  VP SIE L  L+ L L+ CK L+ LP +I  L SL  L L+ C 
Sbjct: 491 IE---KLLLNETTIQYVPPSIERLSRLKELRLSGCKRLMNLPHNIKNLTSLIDLGLANCP 547

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC----NEPPASASWH 190
            + + P+      +++ L+++ TAI    S++     LR L  SGC    N PP      
Sbjct: 548 NVTSFPEV---GTNIQWLNLNRTAIEAVPSTVGEKSKLRYLNMSGCDKLVNLPPTLRKLA 604

Query: 191 LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
                 L G   C      P L G  ++  LDL    + +  + S
Sbjct: 605 QLKYLYLRG---CTNVTASPELAGTKTMKALDLHGTSITDQLVDS 646



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 4/153 (2%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           +  L L+ T+I  VP SIE L+ L+ L L GCK L +LP  I +L  L  L L+ C  + 
Sbjct: 491 IEKLLLNETTIQYVPPSIERLSRLKELRLSGCKRLMNLPHNIKNLTSLIDLGLANCPNVT 550

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            FP++  +++ L+   L+ T+I  VPS++     L  L ++ C  LV LP ++  L  LK
Sbjct: 551 SFPEVGTNIQWLN---LNRTAIEAVPSTVGEKSKLRYLNMSGCDKLVNLPPTLRKLAQLK 607

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            L L GC  +   P+  G  ++++ LD+ GT+I
Sbjct: 608 YLYLRGCTNVTASPELAG-TKTMKALDLHGTSI 639



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 33/247 (13%)

Query: 51  LKCLRTLELSGCSKLKKFPQI--VASMEDLSKLYLDGTSIAEVP-SSIELLPGLELLYLN 107
           L  LR+L L+ C  L +FP +    ++E L KLY +  ++ E+P SS+  L  L  L L+
Sbjct: 396 LANLRSLNLTSCKHLTEFPDLSKATNLETL-KLY-NCNNLVEIPESSLTQLNKLVHLKLS 453

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF 167
           +CK L  LP++IN LKSL+ L+L GC  LE  P      E++E+L ++ T I+    SI 
Sbjct: 454 DCKKLRNLPNNIN-LKSLRFLHLDGCSCLEEFPFI---SETIEKLLLNETTIQYVPPSIE 509

Query: 168 LMKNLRSLYFSGCNEPPASASWHLHLPFNL--------LGKSSCPVALMLPSLTGVCSLT 219
            +  L+ L  SGC          ++LP N+        LG ++CP     P +    ++ 
Sbjct: 510 RLSRLKELRLSGCKR-------LMNLPHNIKNLTSLIDLGLANCPNVTSFPEVG--TNIQ 560

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNR---NNFVTLPASISGLLNLEELELEDCKR 276
            L+L+   +   A+PS +     L+  YLN    +  V LP ++  L  L+ L L  C  
Sbjct: 561 WLNLNRTAI--EAVPSTVGEKSKLR--YLNMSGCDKLVNLPPTLRKLAQLKYLYLRGCTN 616

Query: 277 LQSLPQI 283
           + + P++
Sbjct: 617 VTASPEL 623



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 7/147 (4%)

Query: 655 DEFP----DIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTL 710
           +EFP     I ++L + T I+ +  +IE L  L +L L+GCK L  LP  I  L  L  L
Sbjct: 482 EEFPFISETIEKLLLNETTIQYVPPSIERLSRLKELRLSGCKRLMNLPHNIKNLTSLIDL 541

Query: 711 NLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
            L+       FPE+ ++   L   +L  TAI  +P+++   S     N+  C  L +LP 
Sbjct: 542 GLANCPNVTSFPEVGTNIQWL---NLNRTAIEAVPSTVGEKSKLRYLNMSGCDKLVNLPP 598

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETLG 797
           T+  L  L+ +Y  GC+ +    E  G
Sbjct: 599 TLRKLAQLKYLYLRGCTNVTASPELAG 625



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 72/152 (47%), Gaps = 20/152 (13%)

Query: 656 EFPDIVQVLSDGTDIRELSL------------AIELLFGLVQLTLNGCKNLERLPRTISA 703
           EFPD    LS  T++  L L            ++  L  LV L L+ CK L  LP  I+ 
Sbjct: 412 EFPD----LSKATNLETLKLYNCNNLVEIPESSLTQLNKLVHLKLSDCKKLRNLPNNIN- 466

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
           LK L  L+L G S   EFP I+ + ++LL   L  T I+ +P SIE LS      L  CK
Sbjct: 467 LKSLRFLHLDGCSCLEEFPFISETIEKLL---LNETTIQYVPPSIERLSRLKELRLSGCK 523

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            L +LP  I  L SL  +  + C  + +  E 
Sbjct: 524 RLMNLPHNIKNLTSLIDLGLANCPNVTSFPEV 555


>gi|296081026|emb|CBI18530.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 172/346 (49%), Gaps = 21/346 (6%)

Query: 45  PVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLEL 103
           P  +  L+ L+ + LS   +L + P   +   +L  L L G T++  +PSSI  L  L  
Sbjct: 153 PEKLKPLEKLKVINLSHSQQLIQIPDF-SDTPNLESLILKGCTNLENIPSSIWHLDSLVN 211

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L L+ C  L  L      L SL+ LNL+ C  L+++P++L  ++ L+ L+V G +  +  
Sbjct: 212 LDLSHCSKLQELAEIPWNLYSLEYLNLASCKNLKSLPESLCNLKCLKTLNVIGCS--KLP 269

Query: 164 SSIFLMKNLRSLYFSGCN--EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG----VCS 217
            ++  ++ L  LY S      P + +S        +L        LM  +++G    + S
Sbjct: 270 DNLGSLECLEKLYASSSELISPQSDSSLAGLCSLKVLDMHD--TNLMQRAISGDIGSLYS 327

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L +L+LS C L E  IP DI  L+SL+ L L+ N F+ +  +IS L  L EL L  CK L
Sbjct: 328 LEELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSL 387

Query: 278 QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREY 337
             +P++P +L+ + A+ C+ + TL  +  + + ++  +NC  S  L     +     R  
Sbjct: 388 LEIPKLPSSLRVLDAHDCTGIKTL-SSTSVLQWQWQ-LNCFKSAFLQEIQEMKY---RRL 442

Query: 338 LELQAVSDPGHKLSIVFPGS-QIPKWFMYQ--NEGSSITVTRPSYL 380
           L L A +      S V PGS ++P+       +E +++ +T+P +L
Sbjct: 443 LSLPA-NGVSQGFSTVIPGSGELPEVNQRSSTSENATVNITQPYHL 487



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 58/121 (47%), Gaps = 26/121 (21%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L L GC NLE +P +I  L  L  L+LS  SK +E  EI  +               
Sbjct: 185 LESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNL-------------- 230

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               S+E L      NL  CKNLKSLP ++  L+ L+ +   GCSKL    + LG +E L
Sbjct: 231 ---YSLEYL------NLASCKNLKSLPESLCNLKCLKTLNVIGCSKL---PDNLGSLECL 278

Query: 803 E 803
           E
Sbjct: 279 E 279


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 136/287 (47%), Gaps = 14/287 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A ++ L+ L L    +T +P  +  L  L LL L   +  +++P+ ++ L  LR L+  
Sbjct: 56  LAQLRKLTALDLSNNQLTSLPPELAQLKNLTLLYLSNNQ-FTNIPLELTHLVNLRELD-C 113

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +A +E+L+KL L    +  VP  +  L  L+ LYL+    L  +P  + 
Sbjct: 114 HSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLS-ANQLTHIPQELA 172

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L++L  L+LS   +L  VP  L  +E+LE L +    +      +  + NLR LY    
Sbjct: 173 QLRNLTLLSLSAN-QLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSN 231

Query: 180 --CNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
              N PP  A  HL HL   LL  S   +  + P    + +L +L LS   L   ++P +
Sbjct: 232 KLINVPPELA--HLEHL--TLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQL--TSLPPE 285

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
              L +L  LYL  N    LP   + L NL EL+L D +     P+I
Sbjct: 286 FAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEI 332



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 22/316 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +   K   +LYL    +T VP ++  L  L L++L   + L+S+P  ++ L+ L  L+LS
Sbjct: 10  LEQAKQTGELYLSDEDLTNVPLALAKLDNLTLISLSNNQ-LTSVPPELAQLRKLTALDLS 68

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNEC--KNLVRLPSS 118
             ++L   P  +A +++L+ LYL       +P  +  L  L  L   +C    L  +P  
Sbjct: 69  N-NQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLREL---DCHSNQLTSVPPE 124

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  L++L  L+L    +L +VP  L  +E+L+EL +S   +      +  ++NL  L  S
Sbjct: 125 LAHLENLNKLDLRD-NQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLS 183

Query: 179 G---CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
                  PPA A  HL     +L   +  +  + P L  + +L +L L    L    +P 
Sbjct: 184 ANQLTGVPPALA--HLE-NLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKL--INVPP 238

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FV 290
           ++ +L  L  L L+ N   +LP   + L NL+EL L    +L SLP     L+     ++
Sbjct: 239 ELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHL-SGNQLTSLPPEFAQLKNLTWLYL 297

Query: 291 RANGCSSLVTLFGALK 306
           R+N  ++L   F  LK
Sbjct: 298 RSNQLANLPPEFAQLK 313


>gi|300693822|ref|YP_003749795.1| hypothetical protein RPSI07_mp0822 [Ralstonia solanacearum PSI07]
 gi|299075859|emb|CBJ35168.1| leucine-rich repeat protein type III effector protein [Ralstonia
           solanacearum PSI07]
          Length = 932

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 168/354 (47%), Gaps = 45/354 (12%)

Query: 2   ASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG 61
            ++ +L+ L L  T + E+P S   L+ L+ L+L+    L +LP +   L  L+ L L+G
Sbjct: 313 GALGNLAHLSLSNTKLRELPPSTRNLSTLKTLSLQDNPKLETLPRSFGQLSGLQELTLTG 372

Query: 62  CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
            +++ + P  V  M  L KL +D  S+A++PS    L  L  L L+  + L  LPS I  
Sbjct: 373 -NRIHELPS-VGGMSSLHKLTVDDASLAKLPSDFGALGNLAHLSLSNTQ-LRELPSGIGD 429

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L +LKTL+L    +L  +P +LG++  LE L                     +L  SG  
Sbjct: 430 LSALKTLSLQDNQQLAALPSSLGQLSGLEAL---------------------TLKNSGVR 468

Query: 182 E-PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDN 239
           E PP S +  L      L   + P+  +      +C  LT+L LS+  L    +PS I  
Sbjct: 469 ELPPISQASAL----KALTVENSPLESLPAGFGSLCKQLTQLSLSNTQL--RTLPSSIGK 522

Query: 240 LHSLKELYLNRNNFVT--LPASISGLLNLEELELEDCKRLQSLPQIP---PNLQFVRANG 294
           L  L +L L  N  +     ASI  L  +  ++L  C+RL +LP      P L  +  +G
Sbjct: 523 LSQLTQLTLKNNPRLESLTDASIQKLDKVTTIDLSGCERLSALPSSIGKLPKLNRLDLSG 582

Query: 295 CSSL--VTLFGALKLCRSKYTII---NCIDSLK--LLRKNGLAISMLREYLELQ 341
           C+SL   +L  +L   R +  +I   +  DS++   +R+N  A  +L  +LELQ
Sbjct: 583 CTSLTMASLPRSLVFPRDELKVIFPEHLKDSVRDARIRQNPRA-QLLDGHLELQ 635



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 135/315 (42%), Gaps = 67/315 (21%)

Query: 19  EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC---------------- 62
           E+  ++E L  LE L+LKG KNL +LP  +  L  L  L L+                  
Sbjct: 149 ELQPALENLFLLETLSLKGAKNLKALPDAVWRLPALTELTLAETGIKALPPMAGASALQR 208

Query: 63  -----SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
                S L+K P   A +  L+ L L  T + ++PSS   LP L+ L L +   L +LP 
Sbjct: 209 LTVEDSPLEKLPTGFADLGQLANLSLTNTQLRKLPSSTGTLPALKSLSLQDNPKLEQLPK 268

Query: 118 SI-------------------NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           S+                   +G+ SL+TL +     L  +P   G + +L  L +S T 
Sbjct: 269 SLGHVEELTLIGGLIHELPSASGMPSLQTLTVDK-APLAKLPSDFGALGNLAHLSLSNTK 327

Query: 159 IRR-PTSSIFLMKNLRSLYFSGCNEPPA-----------SASWHLHLPFNLLGKSSCPVA 206
           +R  P S+    +NL +L      + P            S    L L  N + +      
Sbjct: 328 LRELPPST----RNLSTLKTLSLQDNPKLETLPRSFGQLSGLQELTLTGNRIHE------ 377

Query: 207 LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
             LPS+ G+ SL KL + D  L  A +PSD   L +L  L L+      LP+ I  L  L
Sbjct: 378 --LPSVGGMSSLHKLTVDDASL--AKLPSDFGALGNLAHLSLSNTQLRELPSGIGDLSAL 433

Query: 267 EELELEDCKRLQSLP 281
           + L L+D ++L +LP
Sbjct: 434 KTLSLQDNQQLAALP 448



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           D+ EL  A+E LF L  L+L G KNL+ LP  +  L  L+ L L+  +  +  P +  + 
Sbjct: 146 DLHELQPALENLFLLETLSLKGAKNLKALPDAVWRLPALTELTLAE-TGIKALPPMAGA- 203

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILSNLK-DCKNLKSLPSTINGLRSLRMMYPSGCS 787
             L  + +E + +  LP     L    L+NL      L+ LPS+   L +L+ +      
Sbjct: 204 SALQRLTVEDSPLEKLPTGFADLGQ--LANLSLTNTQLRKLPSSTGTLPALKSLSLQDNP 261

Query: 788 KLKNVTETLGKVESL 802
           KL+ + ++LG VE L
Sbjct: 262 KLEQLPKSLGHVEEL 276



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 25/159 (15%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T +REL   I  L  L  L+L   + L  LP ++  L  L  L L   S  RE P I+ +
Sbjct: 418 TQLRELPSGIGDLSALKTLSLQDNQQLAALPSSLGQLSGLEALTLKN-SGVRELPPISQA 476

Query: 728 R-----------------------DQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
                                    QL ++ L  T +R LP+SI  LS      LK+   
Sbjct: 477 SALKALTVENSPLESLPAGFGSLCKQLTQLSLSNTQLRTLPSSIGKLSQLTQLTLKNNPR 536

Query: 765 LKSLP-STINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           L+SL  ++I  L  +  +  SGC +L  +  ++GK+  L
Sbjct: 537 LESLTDASIQKLDKVTTIDLSGCERLSALPSSIGKLPKL 575


>gi|297791293|ref|XP_002863531.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309366|gb|EFH39790.1| hypothetical protein ARALYDRAFT_494475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1158

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 159/379 (41%), Gaps = 98/379 (25%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           L+ L L+GC +L SL     +L  L+TL LS CS  K+FP I    E+L  LYLDGT+I+
Sbjct: 686 LQRLNLEGCTSLESLRNV--NLMSLKTLTLSNCSNFKEFPLIP---ENLEALYLDGTAIS 740

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
           +                        LP ++  LK L  LN+  C  LE +   LG+    
Sbjct: 741 Q------------------------LPDNVVNLKRLVLLNMKDCKMLETISTCLGE---- 772

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALM 208
                              +K L+ L  SGC          L L  F  + KSS    L 
Sbjct: 773 -------------------LKALQKLVLSGC----------LKLKEFPEINKSSLKFLL- 802

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLE 267
                       LD    G     +P     LHS++ L L+RN+ ++ L   I+ L  L 
Sbjct: 803 ------------LD----GTSIKTMPQ----LHSVQYLCLSRNDHISYLRVGINQLSQLT 842

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRS------KYTIINCIDSL 321
            L+L+ C +L  +P++PP LQ++ A+GCSSL  +   L    S       +   NC +  
Sbjct: 843 RLDLKYCTKLTYVPELPPTLQYLDAHGCSSLKNVATPLARIVSTVQNHCTFNFTNCGNLE 902

Query: 322 KLLRKNGLAISMLREYLELQAVSDPGHKL------SIVFPGSQIPKWFMYQNEGSSITVT 375
           +  ++   + +  +  L   A       L      S  FPG ++P WF ++  GS +   
Sbjct: 903 QAAKEEITSYAQRKCQLLPDARKHYNEGLSSEALFSTCFPGCEVPSWFCHEAVGSLLQRK 962

Query: 376 RPSYLYNVNKVVGFAICCV 394
              + ++  ++ G A+C V
Sbjct: 963 LLPHWHD-ERLSGIALCAV 980



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 14/188 (7%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  LYLDGT+I+++P ++  L  L LL +K CK L ++   +  LK L+ L LSGC K
Sbjct: 727 ENLEALYLDGTAISQLPDNVVNLKRLVLLNMKDCKMLETISTCLGELKALQKLVLSGCLK 786

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LK+FP+I  S   L  L LDGTSI  +P     L  ++ L L+   ++  L   IN L  
Sbjct: 787 LKEFPEINKS--SLKFLLLDGTSIKTMPQ----LHSVQYLCLSRNDHISYLRVGINQLSQ 840

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA----IRRPTSSIF-LMKNLRSLYFSG 179
           L  L+L  C KL  VP+      +L+ LD  G +    +  P + I   ++N  +  F+ 
Sbjct: 841 LTRLDLKYCTKLTYVPEL---PPTLQYLDAHGCSSLKNVATPLARIVSTVQNHCTFNFTN 897

Query: 180 CNEPPASA 187
           C     +A
Sbjct: 898 CGNLEQAA 905



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 7/147 (4%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           RLWE   + P +  V L+  + +  LS  +     L +L L GC +LE L R ++ L  L
Sbjct: 652 RLWEGVKDTPVLKWVDLNHSSKLCSLS-GLSKAQNLQRLNLEGCTSLESL-RNVN-LMSL 708

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
            TL LS  S F+EFP I    + L  ++L+GTAI  LP ++  L   +L N+KDCK L++
Sbjct: 709 KTLTLSNCSNFKEFPLIP---ENLEALYLDGTAISQLPDNVVNLKRLVLLNMKDCKMLET 765

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTE 794
           + + +  L++L+ +  SGC KLK   E
Sbjct: 766 ISTCLGELKALQKLVLSGCLKLKEFPE 792



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 97/222 (43%), Gaps = 39/222 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NCS       EFP I + L     DGT I +L   +  L  LV L +  CK LE +   +
Sbjct: 715 NCSNF----KEFPLIPENLEALYLDGTAISQLPDNVVNLKRLVLLNMKDCKMLETISTCL 770

Query: 702 SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP---------------- 745
             LK L  L LSG  K +EFPEI  S  + L   L+GT+I+ +P                
Sbjct: 771 GELKALQKLVLSGCLKLKEFPEINKSSLKFL--LLDGTSIKTMPQLHSVQYLCLSRNDHI 828

Query: 746 ----ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
                 I  LS     +LK C  L  +P       +L+ +   GCS LKNV   L ++ S
Sbjct: 829 SYLRVGINQLSQLTRLDLKYCTKLTYVPELPP---TLQYLDAHGCSSLKNVATPLARIVS 885

Query: 802 LEVRLSSWNRPKMQNDFDCVEQSAVETVTKLA--KAELLRDS 841
                 ++N     N    +EQ+A E +T  A  K +LL D+
Sbjct: 886 TVQNHCTFNFTNCGN----LEQAAKEEITSYAQRKCQLLPDA 923


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 145/288 (50%), Gaps = 22/288 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  L L    +T VP+ +  LT LE L L+  + L+S+P  I  L  L  L ++
Sbjct: 132 IGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNR-LTSVPAEIGQLASLEKLYVA 190

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L +LYL+   +  +P+ I  L  L+ L+LN+   L  LP+ I 
Sbjct: 191 D-NQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLND-NELTGLPAEIG 248

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L SL+ L L G  +L +VP  +G++ SL EL + G  +    + I  + +L  L  SG 
Sbjct: 249 QLTSLRGLYLYGN-QLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGN 307

Query: 180 -CNEPPASASWH-----LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
                PA          L L +N L  +S P       +  + SL  LDL D  L  A++
Sbjct: 308 QLTSVPAEIGQLTFLGCLDLSYNYL--TSLPA-----EIGQLMSLRLLDLDDNRL--ASV 358

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           P++I  L SL+EL+LN N   ++PA I G L + EL LE+  +L S+P
Sbjct: 359 PAEIGQLRSLRELFLNGNLLTSVPAEI-GQLTVRELYLEN-NQLTSVP 404



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 16/301 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L++LYL+   +T +P+ I  L  LE L L   + L+S+P  I  L  L  L L 
Sbjct: 40  IGRLASLTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQ-LTSVPAEIGQLASLDGLYL- 97

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +  L  L LD   ++ VP+ I  L  L+ L L + + L  +P+ + 
Sbjct: 98  GKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQ-LTSVPAEVG 156

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L SL+ L L    +L +VP  +G++ SLE+L V+   +    + I+ + +LR LY    
Sbjct: 157 QLTSLEALRLQ-HNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDN 215

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                PA       L    L  +       LP+  G + SL  L L    L   ++P++I
Sbjct: 216 RLTSLPAEIGQLALLKELWLNDNELT---GLPAEIGQLTSLRGLYLYGNQL--TSVPAEI 270

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             L SL+ELYL  N   ++PA I  L +L+ L L    +L S+P     L F+   GC  
Sbjct: 271 GQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNL-SGNQLTSVPAEIGQLTFL---GCLD 326

Query: 298 L 298
           L
Sbjct: 327 L 327



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 21/267 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  LY+    +T +P+ I  LT L  L L+  + L+SLP  I  L  L+ L L+
Sbjct: 178 IGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNR-LTSLPAEIGQLALLKELWLN 236

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L  LYL G  +  VP+ I  L  L  LYL +   L  +P+ I 
Sbjct: 237 D-NELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYL-QGNQLTSVPAEIG 294

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L SL  LNLSG  +L +VP  +G++  L  LD+S   +    + I  + +LR L     
Sbjct: 295 QLTSLDVLNLSGN-QLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDN 353

Query: 180 -CNEPPASASW-----HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
                PA          L L  NLL  +S P  +      G  ++ +L L +  L   ++
Sbjct: 354 RLASVPAEIGQLRSLRELFLNGNLL--TSVPAEI------GQLTVRELYLENNQL--TSV 403

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASI 260
           P+++  L +L++L L+RN   ++PA I
Sbjct: 404 PAEVGQLAALEQLNLSRNKLTSVPAEI 430



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 141/317 (44%), Gaps = 35/317 (11%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L G  +T VP+ I  LT LE L L   + L+S+P  I  L  L  L L   ++L   P
Sbjct: 3   LNLSGNQLTSVPAEIGQLTSLERLCLNDNQ-LTSVPAEIGRLASLTELYLED-NQLTSLP 60

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             +  +  L  L L    +  VP+ I  L  L+ LYL + + L  +P+ I  L SL  L 
Sbjct: 61  AEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQ-LTSVPAEIGQLTSLGLLG 119

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           L    +L +VP  +G++ +L+ LD+    +    + +  + +L +L              
Sbjct: 120 LDNN-QLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQ----------- 167

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
           H  L       +S P       +  + SL KL ++D  L   ++P++I  L SL+ELYL 
Sbjct: 168 HNRL-------TSVPA-----EIGQLASLEKLYVADNQL--TSMPAEIWRLTSLRELYLE 213

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR-----ANGCSSLVTLFGA 304
            N   +LPA I  L  L+EL L D   L  LP     L  +R      N  +S+    G 
Sbjct: 214 DNRLTSLPAEIGQLALLKELWLND-NELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQ 272

Query: 305 LKLCRSKYTIINCIDSL 321
           L   R  Y   N + S+
Sbjct: 273 LMSLRELYLQGNQLTSV 289



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 27/207 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLK-----------------GCKNLS- 42
           +  +  L +LYL G  +T VP+ I  LT L++L L                  GC +LS 
Sbjct: 270 IGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSY 329

Query: 43  ----SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
               SLP  I  L  LR L+L   ++L   P  +  +  L +L+L+G  +  VP+ I  L
Sbjct: 330 NYLTSLPAEIGQLMSLRLLDLDD-NRLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQL 388

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
              E LYL E   L  +P+ +  L +L+ LNLS   KL +VP  +G + SL  L ++G  
Sbjct: 389 TVRE-LYL-ENNQLTSVPAEVGQLAALEQLNLS-RNKLTSVPAEIGLLTSLRWLLLNGNQ 445

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPA 185
           +      I  + +LR L+ S   EP A
Sbjct: 446 LTSVPGEIGQLTSLRLLFLS-SGEPAA 471


>gi|222622175|gb|EEE56307.1| hypothetical protein OsJ_05392 [Oryza sativa Japonica Group]
          Length = 1881

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 3/163 (1%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            ++ E+P+S   L+ L  L L  C  L +LP++  +L  L+ L LS C KL   P+    
Sbjct: 664 ANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPESCCQ 723

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           + DL+ L L D  ++ ++P  I+ L  LE L +  C  +  LP S+  L  L+ LNLS C
Sbjct: 724 LHDLAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYC 783

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRP-TSSIFLMKNLRSL 175
            +LEN+P  +G ++ L+ LD+ G+ + R   +SIF M  L+++
Sbjct: 784 LRLENLPSCIGDLQ-LQSLDIQGSFLLRDLPNSIFNMSTLKTV 825



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 109/255 (42%), Gaps = 50/255 (19%)

Query: 37  GCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
           G + +S LP ++  LK LR L+ S   ++  F +    + +L  L L  T +  +P++I 
Sbjct: 592 GGRQVSELPSSVYKLKLLRYLDASSL-RISSFSKSFNHLLNLQALILSNTYLKTLPTNIG 650

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            L  L+   L+ C NL  LP+S   L SL  LNL+ C +LE +P + G +  L+ L +S 
Sbjct: 651 CLQKLQYFDLSGCANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSD 710

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
                                                  N L +S C +           
Sbjct: 711 C-----------------------------------YKLNSLPESCCQLH---------- 725

Query: 217 SLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDC 274
            L  LDLSDC  LG+  +P  ID L  L+ L +   + V  LP S+  L  L  L L  C
Sbjct: 726 DLAHLDLSDCYNLGK--LPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYC 783

Query: 275 KRLQSLPQIPPNLQF 289
            RL++LP    +LQ 
Sbjct: 784 LRLENLPSCIGDLQL 798



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 10/205 (4%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS   ++ EL  +   L  L+ L L  C  LE LP +   L  L  L+LS   K    PE
Sbjct: 660 LSGCANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPE 719

Query: 724 ITSSRDQLLEIHLEGTAIRG-LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                  L  + L      G LP  I+ LS     N+  C  +++LP ++  L  LR + 
Sbjct: 720 SCCQLHDLAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLN 779

Query: 783 PSGCSKLKNVTETLG--KVESLEVRLSSWNRPKMQNDFDCVEQSAVE-TVTKL--AKAEL 837
            S C +L+N+   +G  +++SL+++ S   R    + F+      V+ T T L  +K E 
Sbjct: 780 LSYCLRLENLPSCIGDLQLQSLDIQGSFLLRDLPNSIFNMSTLKTVDGTFTYLVSSKVEK 839

Query: 838 LRDSDSWKKNVDKCMKLSTTATSAC 862
           LR++      ++ C KL   +T  C
Sbjct: 840 LREN----LKLEGCCKLDGGSTDLC 860



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           DLSD Y    ++ ++P  I+ L+ LE L +  C  + +LP ++  L  LR L LS C +L
Sbjct: 731 DLSDCY----NLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYCLRL 786

Query: 66  KKFPQIVASMEDLSKLYLDGTSI-AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +  P  +  ++ L  L + G+ +  ++P+SI  +  L+ +   +      + S +  L+ 
Sbjct: 787 ENLPSCIGDLQ-LQSLDIQGSFLLRDLPNSIFNMSTLKTV---DGTFTYLVSSKVEKLR- 841

Query: 125 LKTLNLSGCCKLE 137
            + L L GCCKL+
Sbjct: 842 -ENLKLEGCCKLD 853



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 1/136 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L   I  L  L    L+GC NL  LP +   L  L  LNL+   +    P    +
Sbjct: 640 TYLKTLPTNIGCLQKLQYFDLSGCANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGN 699

Query: 728 RDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            ++L  + L +   +  LP S   L      +L DC NL  LP  I+ L  L  +  + C
Sbjct: 700 LNRLQFLSLSDCYKLNSLPESCCQLHDLAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSC 759

Query: 787 SKLKNVTETLGKVESL 802
           SK++ + E+L K+  L
Sbjct: 760 SKVQALPESLCKLTML 775



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           ++ L+  GC K+            L  LD+ G  +    SS++ +K LR L  S      
Sbjct: 562 VRALHFRGCDKMHLPKQAFSHTLCLRVLDLGGRQVSELPSSVYKLKLLRYLDASSLRISS 621

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSL 243
            S S++  L    L  S+  +  +  ++  +  L   DLS C  L E  +P+   +L SL
Sbjct: 622 FSKSFNHLLNLQALILSNTYLKTLPTNIGCLQKLQYFDLSGCANLNE--LPTSFGDLSSL 679

Query: 244 KELYLNR---NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             L+LN    +    LP S   L  L+ L L DC +L SLP+
Sbjct: 680 --LFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPE 719


>gi|51535966|dbj|BAD38047.1| putative NBS-LRR resistance protein RGH2 [Oryza sativa Japonica
           Group]
          Length = 1216

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 3/163 (1%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            ++ E+P+S   L+ L  L L  C  L +LP++  +L  L+ L LS C KL   P+    
Sbjct: 664 ANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPESCCQ 723

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           + DL+ L L D  ++ ++P  I+ L  LE L +  C  +  LP S+  L  L+ LNLS C
Sbjct: 724 LHDLAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYC 783

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRP-TSSIFLMKNLRSL 175
            +LEN+P  +G ++ L+ LD+ G+ + R   +SIF M  L+++
Sbjct: 784 LRLENLPSCIGDLQ-LQSLDIQGSFLLRDLPNSIFNMSTLKTV 825



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 110/255 (43%), Gaps = 50/255 (19%)

Query: 37  GCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
           G + +S LP ++  LK LR L+ S   ++  F +    + +L  L L  T +  +P++I 
Sbjct: 592 GGRQVSELPSSVYKLKLLRYLDASSL-RISSFSKSFNHLLNLQALILSNTYLKTLPTNIG 650

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            L  L+   L+ C NL  LP+S   L SL  LNL+ C +LE +P + G +  L+ L +S 
Sbjct: 651 CLQKLQYFDLSGCANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSD 710

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
                          L SL  S C          LH                        
Sbjct: 711 CY------------KLNSLPESCC---------QLH------------------------ 725

Query: 217 SLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDC 274
            L  LDLSDC  LG+  +P  ID L  L+ L +   + V  LP S+  L  L  L L  C
Sbjct: 726 DLAHLDLSDCYNLGK--LPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYC 783

Query: 275 KRLQSLPQIPPNLQF 289
            RL++LP    +LQ 
Sbjct: 784 LRLENLPSCIGDLQL 798



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 10/205 (4%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS   ++ EL  +   L  L+ L L  C  LE LP +   L  L  L+LS   K    PE
Sbjct: 660 LSGCANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPE 719

Query: 724 ITSSRDQLLEIHLEGTAIRG-LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
                  L  + L      G LP  I+ LS     N+  C  +++LP ++  L  LR + 
Sbjct: 720 SCCQLHDLAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLN 779

Query: 783 PSGCSKLKNVTETLG--KVESLEVRLSSWNRPKMQNDFDCVEQSAVE-TVTKL--AKAEL 837
            S C +L+N+   +G  +++SL+++ S   R    + F+      V+ T T L  +K E 
Sbjct: 780 LSYCLRLENLPSCIGDLQLQSLDIQGSFLLRDLPNSIFNMSTLKTVDGTFTYLVSSKVEK 839

Query: 838 LRDSDSWKKNVDKCMKLSTTATSAC 862
           LR++      ++ C KL   +T  C
Sbjct: 840 LREN----LKLEGCCKLDGGSTDLC 860



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           DLSD Y    ++ ++P  I+ L+ LE L +  C  + +LP ++  L  LR L LS C +L
Sbjct: 731 DLSDCY----NLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYCLRL 786

Query: 66  KKFPQIVASMEDLSKLYLDGTSI-AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           +  P  +  ++ L  L + G+ +  ++P+SI  +  L+ +   +      + S +  L+ 
Sbjct: 787 ENLPSCIGDLQ-LQSLDIQGSFLLRDLPNSIFNMSTLKTV---DGTFTYLVSSKVEKLR- 841

Query: 125 LKTLNLSGCCKLE 137
            + L L GCCKL+
Sbjct: 842 -ENLKLEGCCKLD 853



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 1/136 (0%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T ++ L   I  L  L    L+GC NL  LP +   L  L  LNL+   +    P    +
Sbjct: 640 TYLKTLPTNIGCLQKLQYFDLSGCANLNELPTSFGDLSSLLFLNLASCHELEALPMSFGN 699

Query: 728 RDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
            ++L  + L +   +  LP S   L      +L DC NL  LP  I+ L  L  +  + C
Sbjct: 700 LNRLQFLSLSDCYKLNSLPESCCQLHDLAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSC 759

Query: 787 SKLKNVTETLGKVESL 802
           SK++ + E+L K+  L
Sbjct: 760 SKVQALPESLCKLTML 775



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 8/162 (4%)

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           ++ L+  GC K+            L  LD+ G  +    SS++ +K LR L  S      
Sbjct: 562 VRALHFRGCDKMHLPKQAFSHTLCLRVLDLGGRQVSELPSSVYKLKLLRYLDASSLRISS 621

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSL 243
            S S++  L    L  S+  +  +  ++  +  L   DLS C  L E  +P+   +L SL
Sbjct: 622 FSKSFNHLLNLQALILSNTYLKTLPTNIGCLQKLQYFDLSGCANLNE--LPTSFGDLSSL 679

Query: 244 KELYLNR---NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             L+LN    +    LP S   L  L+ L L DC +L SLP+
Sbjct: 680 --LFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPE 719


>gi|215261575|gb|ACJ64855.1| disease resistance protein RPP1-like protein R1 [Arabidopsis
            thaliana]
          Length = 1093

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 118/479 (24%), Positives = 205/479 (42%), Gaps = 51/479 (10%)

Query: 15   TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
            +S+ E+PSSIE LT L++L L+ C +L  LP   ++ K L  L+L  C  L K P  +  
Sbjct: 614  SSLVELPSSIEKLTSLQILDLRDCSSLVELPSFGNATK-LEKLDLENCRSLVKLPPSILK 672

Query: 75   MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            +  + +L L   S + E+P+ IE    L  L L  C +L +LPSSI  + +L+  +L  C
Sbjct: 673  I--VGELSLRNCSRVVELPA-IENATNLRELKLQNCSSLEKLPSSIGDMTNLEKFDLCNC 729

Query: 134  CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
              L  +P ++G ++ L  L + G +          +K L +L  + C +         H+
Sbjct: 730  SNLVELPSSIGNLQKLCVLIMCGCSKLETLPININLKALSTLNLTDCLQLKRFPEISTHI 789

Query: 194  PFNLLGKSS---CPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
               +L  ++    P+++M  S   +  ++  +     L E +   DI     + EL L++
Sbjct: 790  ELLMLTGTAIKEVPLSIMSWSRLTLFQMSYFE----SLKEFSHALDI-----ITELQLSK 840

Query: 251  NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRS 310
            +    +P  +  +  L  L L +C  L SLPQ+P +L ++ A+ C SL  L      C  
Sbjct: 841  D-IQEVPPWVKRMSRLRILGLYNCNNLVSLPQLPDSLAYLYADNCKSLERLD-----CCF 894

Query: 311  KYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ-NEG 369
                IN I   K  + N  A  ++      Q V         + PG+Q+P  F ++   G
Sbjct: 895  NNPWINLIFP-KCFKLNQEARDLIMHTSTRQCV---------MLPGTQVPACFNHRATSG 944

Query: 370  SSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIY 429
             S+ +        +   + F  C +  +           SY    +   +D   E + + 
Sbjct: 945  DSLKIKLKE--SPLPTTLRFKACIMLVMVNEEM------SYDRRWMSVDIDIRDEQNDL- 995

Query: 430  FRGKFGHVVSDHLWLLFLPRHGHNWQFE-----SNLIRLSFRSISDPTWKVKRCGFHPI 483
               K     +D++    L  H + ++FE     S  +   F    +  WK++ CG   I
Sbjct: 996  ---KVQCTPNDYIIYPLLVEHIYTFEFEVEEVTSTELVFEFTPHYERNWKIRECGILQI 1051



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 11/217 (5%)

Query: 84  DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
           D   + E+P+ +     LE L L  C +LV LPSSI  L SL+ L+L  C  L  +P + 
Sbjct: 589 DSRDLKELPN-LSTATNLEELKLRRCSSLVELPSSIEKLTSLQILDLRDCSSLVELP-SF 646

Query: 144 GKVESLEELDVSG--TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKS 201
           G    LE+LD+    + ++ P S   ++K +  L    C+      +         L   
Sbjct: 647 GNATKLEKLDLENCRSLVKLPPS---ILKIVGELSLRNCSRVVELPAIENATNLRELKLQ 703

Query: 202 SCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPAS 259
           +C     LPS  G + +L K DL +C      +PS I NL  L  L +   +   TLP +
Sbjct: 704 NCSSLEKLPSSIGDMTNLEKFDLCNCS-NLVELPSSIGNLQKLCVLIMCGCSKLETLPIN 762

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           I+ L  L  L L DC +L+  P+I  +++ +   G +
Sbjct: 763 IN-LKALSTLNLTDCLQLKRFPEISTHIELLMLTGTA 798



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 9/130 (6%)

Query: 669 DIRELSLAIEL-LFG----LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           D+R+ S  +EL  FG    L +L L  C++L +LP +I  LK +  L+L   S+  E P 
Sbjct: 633 DLRDCSSLVELPSFGNATKLEKLDLENCRSLVKLPPSI--LKIVGELSLRNCSRVVELPA 690

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
           I ++ + L E+ L+  +++  LP+SI  ++     +L +C NL  LPS+I  L+ L ++ 
Sbjct: 691 IENATN-LRELKLQNCSSLEKLPSSIGDMTNLEKFDLCNCSNLVELPSSIGNLQKLCVLI 749

Query: 783 PSGCSKLKNV 792
             GCSKL+ +
Sbjct: 750 MCGCSKLETL 759



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 64/197 (32%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSL-----------AIELLFGLVQLTLNGCKNL 694
           NCSR+ E        +  + + T++REL L           +I  +  L +  L  C NL
Sbjct: 681 NCSRVVE--------LPAIENATNLRELKLQNCSSLEKLPSSIGDMTNLEKFDLCNCSNL 732

Query: 695 ERLPRTIS-----------------------ALKYLSTLNLSGLSKFREFPEITSSRDQL 731
             LP +I                         LK LSTLNL+   + + FPEI++  + L
Sbjct: 733 VELPSSIGNLQKLCVLIMCGCSKLETLPININLKALSTLNLTDCLQLKRFPEISTHIELL 792

Query: 732 LEIHLEGTAIRGLPASIELLSG-------------------NILSNLKDCKNLKSLPSTI 772
           +   L GTAI+ +P SI   S                    +I++ L+  K+++ +P  +
Sbjct: 793 M---LTGTAIKEVPLSIMSWSRLTLFQMSYFESLKEFSHALDIITELQLSKDIQEVPPWV 849

Query: 773 NGLRSLRMMYPSGCSKL 789
             +  LR++    C+ L
Sbjct: 850 KRMSRLRILGLYNCNNL 866



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 24/161 (14%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LSD  D++EL   +     L +L L  C +L  LP +I  L  L  L+L   S   E P 
Sbjct: 587 LSDSRDLKELP-NLSTATNLEELKLRRCSSLVELPSSIEKLTSLQILDLRDCSSLVELPS 645

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNI-LSN--------------------LKD 761
             ++  +L ++ LE   ++  LP SI  + G + L N                    L++
Sbjct: 646 FGNAT-KLEKLDLENCRSLVKLPPSILKIVGELSLRNCSRVVELPAIENATNLRELKLQN 704

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           C +L+ LPS+I  + +L       CS L  +  ++G ++ L
Sbjct: 705 CSSLEKLPSSIGDMTNLEKFDLCNCSNLVELPSSIGNLQKL 745


>gi|357449971|ref|XP_003595262.1| Heat shock protein [Medicago truncatula]
 gi|355484310|gb|AES65513.1| Heat shock protein [Medicago truncatula]
          Length = 1541

 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++ + +L  L LD  T++  +  SI  L  L LL+ + CK L  L   I+ L  L TL++
Sbjct: 642 LSGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLSSQRCKQLELLVPNIN-LPSLETLDI 700

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCS+LK FP+++  ME++  +YLD TSI ++P SI  L GL  L+L EC +L +LP SI
Sbjct: 701 RGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQLFLRECMSLTQLPDSI 760

Query: 120 NGLKSLKTLNLSGC 133
             L  L+ +   GC
Sbjct: 761 RILPKLEIITAYGC 774



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T++  +  +I  L  LV L+   CK LE L   I+ L  L TL++ G S+ + FPE
Sbjct: 653 LDDCTNLIRIHKSIGFLNKLVLLSSQRCKQLELLVPNIN-LPSLETLDIRGCSRLKSFPE 711

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +    + +  ++L+ T+I  LP SI  L G     L++C +L  LP +I  L  L ++  
Sbjct: 712 VLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQLFLRECMSLTQLPDSIRILPKLEIITA 771

Query: 784 SGCSKLK 790
            GC   +
Sbjct: 772 YGCRGFR 778



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 12/190 (6%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKV-ESLEELDVSGTAIRRPTSSIFLMKNLR 173
           LP+  N  K+L  L+L   C    V   L KV ESL  LD  G  +     S+  + NL 
Sbjct: 594 LPADFNP-KNLMILSLPESCL---VSFKLLKVFESLSFLDFEGCKLLTELPSLSGLVNLG 649

Query: 174 SLYFSGC-NEPPASASWHLHLPFNLLGKSSCP-VALMLPSLTGVCSLTKLDLSDCGLGEA 231
           +L    C N      S        LL    C  + L++P++  + SL  LD+  C   ++
Sbjct: 650 ALCLDDCTNLIRIHKSIGFLNKLVLLSSQRCKQLELLVPNIN-LPSLETLDIRGCSRLKS 708

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQ 288
             P  +  + +++ +YL++ +   LP SI  L+ L +L L +C  L  LP   +I P L+
Sbjct: 709 -FPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQLFLRECMSLTQLPDSIRILPKLE 767

Query: 289 FVRANGCSSL 298
            + A GC   
Sbjct: 768 IITAYGCRGF 777



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 23/134 (17%)

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN--------- 120
           +++   E LS L  +G  +     S+  L  L  L L++C NL+R+  SI          
Sbjct: 617 KLLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLS 676

Query: 121 --------------GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
                          L SL+TL++ GC +L++ P+ LG +E++  + +  T+I +   SI
Sbjct: 677 SQRCKQLELLVPNINLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSI 736

Query: 167 FLMKNLRSLYFSGC 180
             +  LR L+   C
Sbjct: 737 RNLVGLRQLFLREC 750



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+++  +YLD TSI ++P SI  L GL  L L+ C +L+ LP +I  L  L  +   
Sbjct: 713 LGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQLFLRECMSLTQLPDSIRILPKLEIITAY 772

Query: 61  GCSKLKKF 68
           GC   + F
Sbjct: 773 GCRGFRLF 780



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 50/221 (22%)

Query: 617 MISVDS-GCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSD--GTDI 670
           +I +D+ GC+  +   +  GR+ VR++S  EPG  SRLW +     DIV VL    GTD 
Sbjct: 478 LIKIDANGCVRMHDLVQDMGREIVRQESTVEPGRRSRLWYD----DDIVHVLETNMGTDT 533

Query: 671 RELSLAIELLFGLVQLTLNGC--KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
            E+            + +N C  K ++   +  + +K L  L +   ++F   P+   + 
Sbjct: 534 IEV------------IIINLCNDKEVQWSGKAFTKMKNLKILIIRS-ARFSRGPQKLPNS 580

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILS---------------------NLKDCKNLKS 767
            ++L+ +  G   + LPA     +  ILS                     + + CK L  
Sbjct: 581 LRVLDWN--GYPSQSLPADFNPKNLMILSLPESCLVSFKLLKVFESLSFLDFEGCKLLTE 638

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
           LPS ++GL +L  +    C+ L  + +++G +  L V LSS
Sbjct: 639 LPS-LSGLVNLGALCLDDCTNLIRIHKSIGFLNKL-VLLSS 677


>gi|357493433|ref|XP_003617005.1| Disease resistance protein [Medicago truncatula]
 gi|355518340|gb|AES99963.1| Disease resistance protein [Medicago truncatula]
          Length = 1491

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 217/520 (41%), Gaps = 95/520 (18%)

Query: 4    MKDLSDLYLDGTSITEVPSSIEL-----LTGLELLTLKGCKNLSSLPVTISSLKCLRTLE 58
            MK+L  L  +G  ++E    I+L      + L+ + L GC++L  LP ++     L TL 
Sbjct: 619  MKELGKL--EGIDLSECKHLIKLPDFSKASSLKWVNLSGCESLVDLPPSVLCADMLVTLI 676

Query: 59   LSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
            L  C+K+    +    +  L K+ +DG  S+     S  L+  L+L        +  L  
Sbjct: 677  LHRCTKITSV-RGEKHLNCLEKISVDGCKSLKIFAVSSNLIENLDL----SSTGIQTLDL 731

Query: 118  SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            SI  L+ LK LNL    KL  +P+ L  V S+ EL +SG+A+        + K L    F
Sbjct: 732  SIGSLEKLKRLNLDSL-KLNCLPEGLSSVTSISELKISGSAL-------IVEKQLLEELF 783

Query: 178  SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
             G                                     SL  L + D  + +  +P++I
Sbjct: 784  DGLQ-----------------------------------SLQILHMKDF-INQFELPNNI 807

Query: 238  DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
              L  LKEL L+ +N   LP SI  L  LE L L +C+ L+ +P++PP +  + A  C+S
Sbjct: 808  HVLSKLKELNLDGSNMKRLPESIKKLEELEILSLVNCRELECIPELPPLVTLLNAVNCTS 867

Query: 298  LVT---LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSI-- 352
            LV+   L G   +   K   I+  +SL L   +G ++S++ E L L  +S     +S+  
Sbjct: 868  LVSVSNLKGLATMMMGKTKHISFSNSLNL---DGHSLSLIMENLNLTMMSAVFQNVSVRR 924

Query: 353  ---------------VFPGSQIPKWFMYQNEG-SSITVTRPSYLYNVNKVVGFAICCVFQ 396
                             PG+ IP+ F  Q    SSIT+T    L   + ++GF    V  
Sbjct: 925  LRVKVHSYNYNSVDACRPGTSIPRLFKCQTAADSSITIT---LLPERSNLLGFIYSVVLS 981

Query: 397  VPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHN-WQ 455
                + G  +       + +CS+   G     +       + SDH ++ + P H  +  +
Sbjct: 982  P---AGGNGMKKGEARIKCQCSLGKEG-IKASWLNTHVTELNSDHTYVWYDPFHCDSILK 1037

Query: 456  FESNLIRLSFRSISDPTWKV------KRCGFHPIYMHEVE 489
            F    I   F   +D T +V      K CG   + + E+E
Sbjct: 1038 FYQPKICFEFYVTNDTTGEVDSSIHIKECGVRQVSVAELE 1077


>gi|224103133|ref|XP_002334087.1| predicted protein [Populus trichocarpa]
 gi|222869543|gb|EEF06674.1| predicted protein [Populus trichocarpa]
          Length = 397

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 26/260 (10%)

Query: 203 CPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
           C V L LP     +  L KL+L  C L  + +P  +  L SL+ L L+ NN  T+P S++
Sbjct: 43  CFVDLQLPKRCVDLDCLRKLNLDGCSL--SKVPGSLGRLSSLEVLDLSGNNLRTIPISMN 100

Query: 262 GLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRS---KYTIINCI 318
            L  L+ L L +C+RL+SLP++PP L  + A+ C  L T+  +         ++    C 
Sbjct: 101 KLFELQYLGLRNCRRLESLPELPPRLSKLDAHDCQKLRTVSSSSTGVEGNIFEFIFTRCS 160

Query: 319 ---DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVT 375
              ++ ++L  + L   +  + L  Q    P    +   PG   P+WF +Q+ GS++T  
Sbjct: 161 RLRETNQMLAYSLLKFQLYTKRLCHQLPDVPEGACTFCLPGDVTPEWFSHQSWGSTVTFQ 220

Query: 376 RPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGS---GEGH--YIYF 430
             SY  N N+ +GF +C V        G          +++C+   S   G+ H  Y Y 
Sbjct: 221 LSSYWAN-NEFLGFCLCAVIAFRSFRHGL---------QVKCTYHFSNEHGDSHDLYCYL 270

Query: 431 RGKFGH--VVSDHLWLLFLP 448
            G +    + S+H+++ F P
Sbjct: 271 HGWYDEKCIESEHIFVGFDP 290



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 18/178 (10%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M  L  LYLD T ITE+PS I  L GL  L ++ CK L         ++C   L+L    
Sbjct: 1   MVCLRYLYLDQTCITELPSPIGNLKGLACLEVRNCKYL-------KDIECFVDLQL---- 49

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
                P+    ++ L KL LDG S+++VP S+  L  LE+L L+   NL  +P S+N L 
Sbjct: 50  -----PKRCVDLDCLRKLNLDGCSLSKVPGSLGRLSSLEVLDLSG-NNLRTIPISMNKLF 103

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
            L+ L L  C +LE++P+   ++  L+  D         +SS  +  N+    F+ C+
Sbjct: 104 ELQYLGLRNCRRLESLPELPPRLSKLDAHDCQKLRT-VSSSSTGVEGNIFEFIFTRCS 160


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 159/331 (48%), Gaps = 45/331 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K+L  L+L    +  +P  I  L  L+ L L   K L +LP  I +LK L+ L+LS
Sbjct: 110 IGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNK-LEALPEDIGNLKNLQILDLS 168

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  P+ +  +++L +LYL    +  +P  I  L  L++L L+  K L  LP  I 
Sbjct: 169 -RNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNK-LEALPKEIG 226

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L  L+LS   +LE +P+ +G++++L+ LD+    +      I  ++NLR L     
Sbjct: 227 KLRNLPKLDLS-HNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLREL----- 280

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                      HL  N L          LP   G + +L  L+LS   L   A+P +I N
Sbjct: 281 -----------HLYNNKLK--------ALPKEIGKLKNLRTLNLSTNKL--EALPEEIGN 319

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK---------RLQSLPQIPPNLQFV 290
           L +L+ L L  N   TLP  I  L NL EL+L   K         +LQ+LP++      +
Sbjct: 320 LKNLRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLD-----L 374

Query: 291 RANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
             N   +L    G L+  R  +   N +++L
Sbjct: 375 SHNQLQALPKEIGQLQNLRELHLYNNQLETL 405



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 30/305 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+L    +  +P  I  L  L  L L   K L +LP  I +LK LRTL L 
Sbjct: 271 IGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNK-LEALPEEIGNLKNLRTLNLQ 329

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + LK  P+ +  +++L +L L    +  +P  I  L  L  L L+  + L  LP  I 
Sbjct: 330 -YNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQ-LQALPKEIG 387

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFS 178
            L++L+ L+L    +LE +P+ +GK+++L+ LD+S   +      I  ++NL+   L ++
Sbjct: 388 QLQNLRELHLYNN-QLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYN 446

Query: 179 GCNEPPASAS-----WHLHLPFNLL-------GKSSCPVAL--------MLPSLTG-VCS 217
                P           L+L +N L       GK      L         LP   G + +
Sbjct: 447 QLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKN 506

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L KL+L    L    +P DI  L +L+EL L  N   TLP  I  L NL+EL L    +L
Sbjct: 507 LQKLNLQYNQL--KTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLR-YNKL 563

Query: 278 QSLPQ 282
           ++LP+
Sbjct: 564 ETLPK 568



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 142/284 (50%), Gaps = 13/284 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+L    +  +P  I  L  L++L L   K L +LP  I  L+ L+ L+L 
Sbjct: 386 IGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNK-LEALPKEIGQLQNLQILDLR 444

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L+  P+ +  +++L +L L    +  +P  I  L  L+ L L +   L  LP  I 
Sbjct: 445 -YNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNL-QYNQLKTLPKEIG 502

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFS 178
            LK+L+ LNL    +L+ +P  +GK+++L ELD+    ++     I  ++NL+  +L ++
Sbjct: 503 KLKNLQKLNLQ-YNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYN 561

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    L  +       LP  +  + +L KL LS   L   A+P +I
Sbjct: 562 KLETLPKEIGKLRNLKILYLSHNQLQA---LPKEIEKLVNLRKLYLSGNQL--QALPKEI 616

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
             L +L+ L L  N   TLP  I  L +L+ L L D K+L+SLP
Sbjct: 617 GKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCL-DNKQLESLP 659



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 133/272 (48%), Gaps = 36/272 (13%)

Query: 56  TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRL 115
            L+LS  +KLK  P+ +  +++L +L L    +  +P  I  L  L  LYL++ K L  L
Sbjct: 49  VLDLS-SNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNK-LEAL 106

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           P  I  LK+L+TL+L    +L+ +P+ +GK+++L+EL +S   +      I  +KNL+ L
Sbjct: 107 PEDIGNLKNLRTLHLYNN-QLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQIL 165

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIP 234
             S                     ++       LP   G + +L +L LSD  L   A+P
Sbjct: 166 DLS---------------------RNQLKT---LPEEIGKLQNLQELYLSDNKL--EALP 199

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQF-- 289
            DI NL +L+ L L+RN    LP  I  L NL +L+L    +L++LP+      NLQ   
Sbjct: 200 EDIGNLKNLQILDLSRNKLEALPKEIGKLRNLPKLDL-SHNQLETLPEEIGQLQNLQILD 258

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
           +R N   +L    G L+  R  +   N + +L
Sbjct: 259 LRYNQLETLPEEIGQLQNLRELHLYNNKLKAL 290



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 6/263 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L    +  +P  I  L  L++L L+    L +LP  I  L+ L+ L L 
Sbjct: 409 IGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLR-YNQLEALPKEIGKLQNLQELNLR 467

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL+  P+ +  +++L KL L    +  +P  I  L  L+ L L +   L  LP  I 
Sbjct: 468 -YNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNL-QYNQLKTLPKDIG 525

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+ L+L    +L+ +P  +GK+++L+EL++    +      I  ++NL+ LY S  
Sbjct: 526 KLKNLRELDLRNN-QLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHN 584

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                       +    L  S   +  +   +  + +L  LDL +  L    +P DI  L
Sbjct: 585 QLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPL--KTLPKDIGKL 642

Query: 241 HSLKELYLNRNNFVTLPASISGL 263
            SL+ L L+     +LP  I  L
Sbjct: 643 KSLQTLCLDNKQLESLPIEIGKL 665



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 3/109 (2%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           LE LP  I  L+ L  L+L   ++    PE       L E+HL    ++ LP  I  L  
Sbjct: 241 LETLPEEIGQLQNLQILDLR-YNQLETLPEEIGQLQNLRELHLYNNKLKALPKEIGKLKN 299

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               NL   K L++LP  I  L++LR +     + LK + E +GK+++L
Sbjct: 300 LRTLNLSTNK-LEALPEEIGNLKNLRTLNLQ-YNPLKTLPEEIGKLQNL 346


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 22/290 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L DL L    +T +P  I  L  L+ L L     L +LP  I  L+ L+ ++ S
Sbjct: 102 IGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMD-S 160

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  ++ L +L+L+   +  VP  I  L  L+ L L++ + L  +P  I 
Sbjct: 161 SRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQ-LTTIPKEIG 219

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L+SL+ L LS   +L  +P  +GK+++L+ L ++   +      I  ++NL+ LY    
Sbjct: 220 QLQSLQGLTLS-FNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHN 278

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
                P    +      L L  NLL          LP   G + +L +L L+   L    
Sbjct: 279 KLATIPQEIGNLQSLQVLTLDRNLLAP--------LPKEIGKLQNLQRLALTVNAL--TT 328

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +P +I NL +LKEL L  N   TLP  I  L NL+EL L D  +L++LP+
Sbjct: 329 LPKEIGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHL-DYNQLKTLPK 377



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 131/280 (46%), Gaps = 20/280 (7%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           LYL+   +T +P  I  L  L+ L L   + L+++P  I  L+ L+ L+L G +K+   P
Sbjct: 42  LYLNAKKLTALPKEIGQLQNLQGLNLWDNQ-LTTMPKEIGELQHLQKLDL-GFNKITVLP 99

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             +  ++ L  L L    +  +P  I  L  L+ L+L     L+ LP  I  L++L+ ++
Sbjct: 100 NEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMD 159

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPAS 186
            S   +L  +P  +G+++ L+ L ++   +      I  ++NL+ L          P   
Sbjct: 160 -SSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEI 218

Query: 187 ASWH----LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
                   L L FN L   + P       +  + +L  L L+  GL  A IP +I NL +
Sbjct: 219 GQLQSLQGLTLSFNQL--RTIP-----KEIGKLQNLQGLTLTSNGL--ATIPKEIGNLQN 269

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           LK LYL+ N   T+P  I  L +L+ L L D   L  LP+
Sbjct: 270 LKVLYLDHNKLATIPQEIGNLQSLQVLTL-DRNLLAPLPK 308



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 46/223 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L  L LD   +T +P  I  L  L+ LTL     L ++P  I  L+ L+ L L+
Sbjct: 195 IGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTL-SFNQLRTIPKEIGKLQNLQGLTLT 253

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN------------E 108
             + L   P+ + ++++L  LYLD   +A +P  I  L  L++L L+            +
Sbjct: 254 -SNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIGK 312

Query: 109 CKNLVRL----------PSSINGLKSLKTLNLSG---------CCKLENV---------- 139
            +NL RL          P  I  L++LK LNL+            KL+N+          
Sbjct: 313 LQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQL 372

Query: 140 ---PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
              P  +GK++SLE L+++G  +      I  ++NL+ L   G
Sbjct: 373 KTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKVLSLVG 415


>gi|294462528|gb|ADE76810.1| unknown [Picea sitchensis]
          Length = 482

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 136/320 (42%), Gaps = 55/320 (17%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +  +P S   +T L L+ L GC  L  LP +  +L  L  ++LS C KL++ P    ++ 
Sbjct: 9   LERLPDSFGSMTNLHLMDLSGCVKLERLPDSFCNLTNLHHMDLSRCGKLERLPDSFGTLT 68

Query: 77  DLSKLYLDGTSIAE-VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           +L  + L      E +P S   L  L  + L  C+ L RLP S+  L +L  +NL+ C K
Sbjct: 69  NLHHIDLSNCGKLERLPDSFGSLTNLHHMNLVCCRKLKRLPDSLGNLTNLHHINLTLCRK 128

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL--YFSGCNEPPASASWHLHL 193
           LE +PD+ G + +L  LD+S            L K L  L   F  CN            
Sbjct: 129 LERLPDSFGSLMNLHHLDLS------------LCKKLERLPNSFGSCNR----------- 165

Query: 194 PFNLLGKSSCP-VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
               L  S C  + +   +L  + +L  +D S CG  E   P  + +  SLK L L   N
Sbjct: 166 -IKYLNSSCCSNLTISSDTLGNIRTLEHIDFSGCGKIELW-PLQLAHQRSLKILKLTGTN 223

Query: 253 FVTLPASI-----------------------SGLLNLEELELEDCKRLQSLPQIP---PN 286
              LP++I                         L NL+EL L+DC+ L+ LP        
Sbjct: 224 IKELPSAIEVPTDLEVLWAGSPLLDTLYPLLGDLKNLKELRLKDCRELKCLPASVGRLSQ 283

Query: 287 LQFVRANGCSSLVTLFGALK 306
           L  +   GC ++  LF  ++
Sbjct: 284 LTQLEVAGCPAIELLFKKVR 303



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 90/220 (40%), Gaps = 44/220 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLEL-----------------------LTLKG 37
           +A  + L  L L GT+I E+PS+IE+ T LE+                       L LK 
Sbjct: 208 LAHQRSLKILKLTGTNIKELPSAIEVPTDLEVLWAGSPLLDTLYPLLGDLKNLKELRLKD 267

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLK----------------KF-PQIVASMEDLSK 80
           C+ L  LP ++  L  L  LE++GC  ++                KF   I   M  L +
Sbjct: 268 CRELKCLPASVGRLSQLTQLEVAGCPAIELLFKKVREQRETVRTLKFNSSIHKYMPCLQE 327

Query: 81  LYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
           L    T I+EV     + P L    L EC NLV + +  N L  +K   +S C  L ++ 
Sbjct: 328 LTPQDTEISEVSFDEGVCPNLRKFILRECINLVEVGTLPNTLTYVK---VSSCYNLRSI- 383

Query: 141 DTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           + L  +  L+ L +          S+  +  L SLY   C
Sbjct: 384 EGLSGLAMLQSLVIRKCNELHELLSVKTLVALESLYAIDC 423



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 5/162 (3%)

Query: 647 CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           C +L    D F ++  +    LS    +  L  +   L  L  + L+ C  LERLP +  
Sbjct: 30  CVKLERLPDSFCNLTNLHHMDLSRCGKLERLPDSFGTLTNLHHIDLSNCGKLERLPDSFG 89

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGLPASIELLSGNILSNLKD 761
           +L  L  +NL    K +  P+   +   L  I+L     +  LP S   L      +L  
Sbjct: 90  SLTNLHHMNLVCCRKLKRLPDSLGNLTNLHHINLTLCRKLERLPDSFGSLMNLHHLDLSL 149

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           CK L+ LP++      ++ +  S CS L   ++TLG + +LE
Sbjct: 150 CKKLERLPNSFGSCNRIKYLNSSCCSNLTISSDTLGNIRTLE 191



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 15/150 (10%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGL 744
           + L+GC  LERLP +   L  L  ++LS   K    P+   +   L  I L     +  L
Sbjct: 25  MDLSGCVKLERLPDSFCNLTNLHHMDLSRCGKLERLPDSFGTLTNLHHIDLSNCGKLERL 84

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG------- 797
           P S   L+     NL  C+ LK LP ++  L +L  +  + C KL+ + ++ G       
Sbjct: 85  PDSFGSLTNLHHMNLVCCRKLKRLPDSLGNLTNLHHINLTLCRKLERLPDSFGSLMNLHH 144

Query: 798 -------KVESLEVRLSSWNRPKMQNDFDC 820
                  K+E L     S NR K  N   C
Sbjct: 145 LDLSLCKKLERLPNSFGSCNRIKYLNSSCC 174



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 1/119 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGL 744
           + L+ C+ LERLP +  ++  L  ++LSG  K    P+   +   L  + L     +  L
Sbjct: 1   MDLSQCELLERLPDSFGSMTNLHLMDLSGCVKLERLPDSFCNLTNLHHMDLSRCGKLERL 60

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           P S   L+     +L +C  L+ LP +   L +L  M    C KLK + ++LG + +L 
Sbjct: 61  PDSFGTLTNLHHIDLSNCGKLERLPDSFGSLTNLHHMNLVCCRKLKRLPDSLGNLTNLH 119



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 51/175 (29%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISA---LKYLST---------------------LNLSGL 715
           L  L  L L+ CK LERLP +  +   +KYL++                     ++ SG 
Sbjct: 139 LMNLHHLDLSLCKKLERLPNSFGSCNRIKYLNSSCCSNLTISSDTLGNIRTLEHIDFSGC 198

Query: 716 SKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL-------------------LSGNIL 756
            K   +P   + +  L  + L GT I+ LP++IE+                   L G++ 
Sbjct: 199 GKIELWPLQLAHQRSLKILKLTGTNIKELPSAIEVPTDLEVLWAGSPLLDTLYPLLGDLK 258

Query: 757 S----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL----KNVTETLGKVESLE 803
           +     LKDC+ LK LP+++  L  L  +  +GC  +    K V E    V +L+
Sbjct: 259 NLKELRLKDCRELKCLPASVGRLSQLTQLEVAGCPAIELLFKKVREQRETVRTLK 313


>gi|13517466|gb|AAK28804.1|AF310959_1 resistance-like protein P1-B [Linum usitatissimum]
          Length = 1196

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 226/526 (42%), Gaps = 84/526 (15%)

Query: 19   EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
            EVP  ++ LT L  L +  CKNL  LP  + S K L+ + + G   + + P+I +   +L
Sbjct: 715  EVPFHVQYLTKLVTLDISHCKNLKRLPPKLDS-KLLKHVRMKGLG-ITRCPEIDS--REL 770

Query: 79   SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
             +  L GTS+ E+PS+I  +    +L L+  KN+ + P     LK    ++         
Sbjct: 771  EEFDLRGTSLGELPSAIYNIKQNGVLRLH-GKNITKFPPITTTLKHFSLIS--------- 820

Query: 139  VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHLHLPFN 196
                     S+ E+D++    +  TS   L+   ++L+ +G    E   +  W++     
Sbjct: 821  --------TSIREIDLADYHQQHQTSDGLLLPRFQNLFLAGNRQLEVLPNGIWNMISEDL 872

Query: 197  LLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
            L+G+S  P+   LP ++  + +LT L++  C     +IP+ I NL SL+ L L++    +
Sbjct: 873  LIGRS--PLIESLPEISEPMNTLTSLEVFYCR-SLTSIPTSISNLRSLRSLRLSKTGIKS 929

Query: 256  LPASISGLLNLEELELEDCKRLQ------------------------SLPQIPPNLQFVR 291
            LP+SI  L  L  ++L +CK L+                        SLP++PPNL+ + 
Sbjct: 930  LPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPPNLKTLN 989

Query: 292  ANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLS 351
             +GC SL     AL     K   +N I   +  + +    +       + A   P ++  
Sbjct: 990  VSGCKSL----QALPSNTCKLLYLNRIYFEECPQVDQTIPAEFMANFLVHASLSPSYERQ 1045

Query: 352  IVFPGSQIPKWFMYQN----EGSSITVTRPSYLYNVNK----VVGFAICCVFQVPKHSTG 403
            +   GS++PKWF Y++    + S++ V  P  L N +     + G A  CV     +S  
Sbjct: 1046 VRCSGSELPKWFSYRSMEDEDCSTVKVELP--LANDSPDHPMIKGIAFGCV-----NSCD 1098

Query: 404  TYLFHSYPAHELECSMDGSGEGHYIYFRGKFG--HVVSDHLWLLFLPRHGHNWQFESNLI 461
             Y  +S+      C +  +    ++      G     S+ +WL+F      N    S   
Sbjct: 1099 PY--YSWMRMGCRCEVGNTTVASWVSNVKVMGPEEKSSEKVWLVF------NKNLSST-- 1148

Query: 462  RLSFRSISDPTWKVKRCGFHPIYMHEVEEFDETTKQSTRFTSCNLN 507
              S  S  D  W VK  GF   +     ++D+   +  +   C ++
Sbjct: 1149 -GSMGSEEDEAWYVKYGGFDVSFNFYFLDYDDEIIKKVKIKRCGVS 1193



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 6/176 (3%)

Query: 7    LSDLYLDGTSITEV-PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
              +L+L G    EV P+ I  +   +LL  +    + SLP     +  L +LE+  C  L
Sbjct: 846  FQNLFLAGNRQLEVLPNGIWNMISEDLLIGRS-PLIESLPEISEPMNTLTSLEVFYCRSL 904

Query: 66   KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
               P  ++++  L  L L  T I  +PSSI  L  L  + L  CK+L  +P+SI+ L SL
Sbjct: 905  TSIPTSISNLRSLRSLRLSKTGIKSLPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSL 964

Query: 126  KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC 180
             T ++SGC  + ++P+      +L+ L+VSG  +++   S+   +  L  +YF  C
Sbjct: 965  VTFSMSGCKIIISLPEL---PPNLKTLNVSGCKSLQALPSNTCKLLYLNRIYFEEC 1017



 Score = 47.0 bits (110), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 66/234 (28%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKC----------- 53
           ++L +  L GTS+ E+PS+I  +    +L L G KN++  P   ++LK            
Sbjct: 768 RELEEFDLRGTSLGELPSAIYNIKQNGVLRLHG-KNITKFPPITTTLKHFSLISTSIREI 826

Query: 54  -------------------LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-----TSIA 89
                               + L L+G  +L+  P  + +M  +S+  L G      S+ 
Sbjct: 827 DLADYHQQHQTSDGLLLPRFQNLFLAGNRQLEVLPNGIWNM--ISEDLLIGRSPLIESLP 884

Query: 90  EVPSSIELLPGLELLYLNECKNLV-----------------------RLPSSINGLKSLK 126
           E+   +  L  LE+ Y   C++L                         LPSSI+ L+ L 
Sbjct: 885 EISEPMNTLTSLEVFY---CRSLTSIPTSISNLRSLRSLRLSKTGIKSLPSSIHELRQLY 941

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           +++L  C  LE++P+++  + SL    +SG  I    S   L  NL++L  SGC
Sbjct: 942 SIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKI--IISLPELPPNLKTLNVSGC 993



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 672 ELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL 731
           E+   ++ L  LV L ++ CKNL+RLP  + + K L  + + GL   R  PEI S   +L
Sbjct: 715 EVPFHVQYLTKLVTLDISHCKNLKRLPPKLDS-KLLKHVRMKGLGITR-CPEIDSR--EL 770

Query: 732 LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPS 784
            E  L GT++  LP++I  +  N +  L   KN+   P     L+   ++  S
Sbjct: 771 EEFDLRGTSLGELPSAIYNIKQNGVLRLHG-KNITKFPPITTTLKHFSLISTS 822



 Score = 42.7 bits (99), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 56/111 (50%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           +E LP     +  L++L +         P   S+   L  + L  T I+ LP+SI  L  
Sbjct: 880 IESLPEISEPMNTLTSLEVFYCRSLTSIPTSISNLRSLRSLRLSKTGIKSLPSSIHELRQ 939

Query: 754 NILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
               +L++CK+L+S+P++I+ L SL     SGC  + ++ E    +++L V
Sbjct: 940 LYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPPNLKTLNV 990



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 26/122 (21%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T I+ L  +I  L  L  + L  CK+LE +P +I  L  L T ++SG       PE    
Sbjct: 925  TGIKSLPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPE---- 980

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
                            LP +++ L      N+  CK+L++LPS    L  L  +Y   C 
Sbjct: 981  ----------------LPPNLKTL------NVSGCKSLQALPSNTCKLLYLNRIYFEECP 1018

Query: 788  KL 789
            ++
Sbjct: 1019 QV 1020


>gi|297800148|ref|XP_002867958.1| mob1/phocein family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313794|gb|EFH44217.1| mob1/phocein family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1419

 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 42/331 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVP----SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRT 56
            A ++ L  L    T I  +P    +    +  L  L L+ C  L  LP  +  L  L+ 
Sbjct: 622 FAHLQQLEHLDFSETKIIRLPIFHTNDFRTMPILTRLLLRNCTRLKRLP-QLRHLTKLQV 680

Query: 57  LELSGCSKLKKFPQI-VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRL 115
           L+  G + L +  ++ +   E+L  L +  TS+ E+  +I  +  L  L +  C  +  L
Sbjct: 681 LDACGATSLVEMLEVCLEEKEELRILDISKTSLPELADTIADVVHLNKLLIRNCSQIEEL 740

Query: 116 PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
           PS I  L  L+  ++SGC KL+ +  + GK+  L E+++S T +      I  + NL+ L
Sbjct: 741 PS-IEKLTHLEVFDVSGCNKLKKIDGSFGKMSYLHEVNISETNLAELPDKISELSNLKEL 799

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
               C +  A                       LP+L  +  L   D+S     E  I  
Sbjct: 800 IIRNCTKLKA-----------------------LPNLEKLTHLEIFDVSGSTELET-IEG 835

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRAN 293
             +NL  L ++ L+  N   LP  IS L NLEEL + +C +L++LP +    +L+    +
Sbjct: 836 SFENLSCLHKVNLSGTNLCELPNKISELSNLEELIVRNCTKLKALPNLEKLTHLEIFDVS 895

Query: 294 GCSSLVTLFGALK---------LCRSKYTII 315
           GC+ L  + G+ +         LC SK  ++
Sbjct: 896 GCTDLDKIEGSFENMSYLRESILCSSKRIVL 926



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 133/326 (40%), Gaps = 45/326 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             +M  L  + L G +I   PS+IE L+ L    L+ C  L  LP      K L  +++ 
Sbjct: 538 FKNMTQLQSINLSGLAIKSSPSTIENLSMLRCFILRHCSELQDLPNFNVETKKLEVIDIH 597

Query: 61  GCSKLKKFPQIV-------------ASMEDLSKLYLDGTSIAEVP----SSIELLPGLEL 103
           G  KL+ +   V             A ++ L  L    T I  +P    +    +P L  
Sbjct: 598 GARKLESYFDRVKDWKDYKGKNKNFAHLQQLEHLDFSETKIIRLPIFHTNDFRTMPILTR 657

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL-ENVPDTLGKVESLEELDVSGTAIRRP 162
           L L  C  L RLP  +  L  L+ L+  G   L E +   L + E L  LD+S T++   
Sbjct: 658 LLLRNCTRLKRLP-QLRHLTKLQVLDACGATSLVEMLEVCLEEKEELRILDISKTSLPEL 716

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
             +I  + +L  L    C++                          LPS+  +  L   D
Sbjct: 717 ADTIADVVHLNKLLIRNCSQIEE-----------------------LPSIEKLTHLEVFD 753

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +S C      I      +  L E+ ++  N   LP  IS L NL+EL + +C +L++LP 
Sbjct: 754 VSGCN-KLKKIDGSFGKMSYLHEVNISETNLAELPDKISELSNLKELIIRNCTKLKALPN 812

Query: 283 IPP--NLQFVRANGCSSLVTLFGALK 306
           +    +L+    +G + L T+ G+ +
Sbjct: 813 LEKLTHLEIFDVSGSTELETIEGSFE 838



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 22/237 (9%)

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           M+DL  + L   +  E+  S+  L  L +L + +C +L+     + GL+ L  L +SG  
Sbjct: 470 MQDLEVVVLFEPTFHELVQSLSKLKKLRVLVIRDC-DLIDNIDKLTGLEGLHVLEVSGAS 528

Query: 135 KLENVPDTLGK-VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            L N+PD   K +  L+ +++SG AI+   S+I  +  LR      C+E          L
Sbjct: 529 SLVNIPDDFFKNMTQLQSINLSGLAIKSSPSTIENLSMLRCFILRHCSELQ-------DL 581

Query: 194 P-FNLLGKSSCPVALMLPSLTGVCSL-TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
           P FN+  K      L +  + G   L +  D             +  +L  L+ L  +  
Sbjct: 582 PNFNVETKK-----LEVIDIHGARKLESYFDRVKDWKDYKGKNKNFAHLQQLEHLDFSET 636

Query: 252 NFVTLPA----SISGLLNLEELELEDCKRLQSLPQIP--PNLQFVRANGCSSLVTLF 302
             + LP         +  L  L L +C RL+ LPQ+     LQ + A G +SLV + 
Sbjct: 637 KIIRLPIFHTNDFRTMPILTRLLLRNCTRLKRLPQLRHLTKLQVLDACGATSLVEML 693



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 6/169 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL+  I  +  L +L +  C  +E LP +I  L +L   ++SG +K ++       
Sbjct: 711 TSLPELADTIADVVHLNKLLIRNCSQIEELP-SIEKLTHLEVFDVSGCNKLKKIDGSFGK 769

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L E+++  T +  LP  I  LS      +++C  LK+LP+ +  L  L +   SG +
Sbjct: 770 MSYLHEVNISETNLAELPDKISELSNLKELIIRNCTKLKALPN-LEKLTHLEIFDVSGST 828

Query: 788 KLKNVTETLGKVESL-EVRLSSWN---RPKMQNDFDCVEQSAVETVTKL 832
           +L+ +  +   +  L +V LS  N    P   ++   +E+  V   TKL
Sbjct: 829 ELETIEGSFENLSCLHKVNLSGTNLCELPNKISELSNLEELIVRNCTKL 877



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 21/193 (10%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T++ EL   I  L  L +L +  C  L+ LP  +  L +L   ++SG ++         +
Sbjct: 781 TNLAELPDKISELSNLKELIIRNCTKLKALP-NLEKLTHLEIFDVSGSTELETIEGSFEN 839

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
              L +++L GT +  LP  I  LS      +++C  LK+LP+ +  L  L +   SGC+
Sbjct: 840 LSCLHKVNLSGTNLCELPNKISELSNLEELIVRNCTKLKALPN-LEKLTHLEIFDVSGCT 898

Query: 788 KLKNVTETLGKVESLEVRLSSWNRPKMQNDFDCVEQSAVETVTKLAKAELLRDSDSWKKN 847
            L  +  +   +  L   +   ++  +  D  C+E+                  D W + 
Sbjct: 899 DLDKIEGSFENMSYLRESILCSSKRIVLADSSCLER------------------DQWSQ- 939

Query: 848 VDKCMKLSTTATS 860
           + +C+K+ +  +S
Sbjct: 940 IKECLKMKSEGSS 952


>gi|357449991|ref|XP_003595272.1| Heat shock protein [Medicago truncatula]
 gi|355484320|gb|AES65523.1| Heat shock protein [Medicago truncatula]
          Length = 1805

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D T++  +  SI  L  L LL+ + CK L  L   I+ L  L TL++ GCS+LK FP+++
Sbjct: 654 DCTNLIRIHESIGFLNKLVLLSSQRCKQLELLVPNIN-LPSLETLDIRGCSRLKSFPEVL 712

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             ME++  +YLD TSI ++P SI  L GL  ++L EC +L +LP SI  L  L+ +   G
Sbjct: 713 GVMENIRYVYLDQTSIGKLPFSIRNLVGLRQMFLRECMSLTQLPDSIRILPKLEIITAYG 772

Query: 133 C 133
           C
Sbjct: 773 C 773



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T++  +  +I  L  LV L+   CK LE L   I+ L  L TL++ G S+ + FPE
Sbjct: 652 LDDCTNLIRIHESIGFLNKLVLLSSQRCKQLELLVPNIN-LPSLETLDIRGCSRLKSFPE 710

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +    + +  ++L+ T+I  LP SI  L G     L++C +L  LP +I  L  L ++  
Sbjct: 711 VLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQMFLRECMSLTQLPDSIRILPKLEIITA 770

Query: 784 SGCSKLK 790
            GC   +
Sbjct: 771 YGCRGFR 777



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 12/190 (6%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKV-ESLEELDVSGTAIRRPTSSIFLMKNLR 173
           LP+  N  K+L  L+L   C    V   L KV ESL  LD  G  +     S+  + NL 
Sbjct: 593 LPADFNP-KNLMILSLPESCL---VSFKLLKVFESLSFLDFKGCKLLTELPSLSGLVNLG 648

Query: 174 SLYFSGC-NEPPASASWHLHLPFNLLGKSSCP-VALMLPSLTGVCSLTKLDLSDCGLGEA 231
           +L    C N      S        LL    C  + L++P++  + SL  LD+  C   ++
Sbjct: 649 ALCLDDCTNLIRIHESIGFLNKLVLLSSQRCKQLELLVPNIN-LPSLETLDIRGCSRLKS 707

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQ 288
             P  +  + +++ +YL++ +   LP SI  L+ L ++ L +C  L  LP   +I P L+
Sbjct: 708 -FPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQMFLRECMSLTQLPDSIRILPKLE 766

Query: 289 FVRANGCSSL 298
            + A GC   
Sbjct: 767 IITAYGCRGF 776



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+++  +YLD TSI ++P SI  L GL  + L+ C +L+ LP +I  L  L  +   
Sbjct: 712 LGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQMFLRECMSLTQLPDSIRILPKLEIITAY 771

Query: 61  GCSKLKKF 68
           GC   + F
Sbjct: 772 GCRGFRLF 779



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 23/134 (17%)

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN--------- 120
           +++   E LS L   G  +     S+  L  L  L L++C NL+R+  SI          
Sbjct: 616 KLLKVFESLSFLDFKGCKLLTELPSLSGLVNLGALCLDDCTNLIRIHESIGFLNKLVLLS 675

Query: 121 --------------GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
                          L SL+TL++ GC +L++ P+ LG +E++  + +  T+I +   SI
Sbjct: 676 SQRCKQLELLVPNINLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSI 735

Query: 167 FLMKNLRSLYFSGC 180
             +  LR ++   C
Sbjct: 736 RNLVGLRQMFLREC 749



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 50/221 (22%)

Query: 617 MISVD-SGCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVL--SDGTDI 670
           +I VD +GC+  +   +  GR+ VR++S  EPG  SRLW +     DIV VL  + GTD 
Sbjct: 477 LIKVDGNGCVRMHDLVQDMGREIVRQESTVEPGRRSRLWFD----DDIVHVLETNTGTDT 532

Query: 671 RELSLAIELLFGLVQLTLNGC--KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
            E+            + +N C  K ++   +  + +K L  L +   ++F   P+   + 
Sbjct: 533 IEV------------IIMNLCNDKEVQWSGKAFNKMKNLKILIIRS-ARFSRGPQKLPNS 579

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNILS---------------------NLKDCKNLKS 767
            ++L+ +  G   + LPA     +  ILS                     + K CK L  
Sbjct: 580 LRVLDWN--GYPSQSLPADFNPKNLMILSLPESCLVSFKLLKVFESLSFLDFKGCKLLTE 637

Query: 768 LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS 808
           LPS ++GL +L  +    C+ L  + E++G +  L V LSS
Sbjct: 638 LPS-LSGLVNLGALCLDDCTNLIRIHESIGFLNKL-VLLSS 676


>gi|357513731|ref|XP_003627154.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355521176|gb|AET01630.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1544

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 219/507 (43%), Gaps = 90/507 (17%)

Query: 24   IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
            ++ L  LE + L  CK L  LP    +LK L+ L LSGC +L +      S + L  L L
Sbjct: 618  MQELVNLEAIDLSECKQLRHLPDLSGALK-LKQLRLSGCEELCEVRPSAFSKDTLDTLLL 676

Query: 84   DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
            D  +  E     + L  L+               S+ G KSLK  +LS            
Sbjct: 677  DRCTKLESLMGEKHLTSLKYF-------------SVKGCKSLKEFSLSS----------- 712

Query: 144  GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHLHLPFNLLGKS 201
               +S+  LD+S T I+    SI  M NL  L     N    P   S HL      L  S
Sbjct: 713  ---DSINRLDLSKTGIKILHPSIGDMNNLIWLNLEDLNLTNLPIELS-HLR-SLTELRVS 767

Query: 202  SCPVAL---MLPSLTGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
             C V     +     G+  L  L L DC  L E  +P++I +L SL EL L+ ++   LP
Sbjct: 768  KCNVVTKSKLEALFEGLTLLRLLHLKDCCNLIE--LPANISSLESLHELRLDGSSVEELP 825

Query: 258  ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL-----FGALKLCRSKY 312
            ASI  L  LE   L++C +L+ LP++P +++  +A+ C+SL+T+     F    + + KY
Sbjct: 826  ASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSLITVSTLKTFSINMIGQKKY 885

Query: 313  -TIINCI--------------DSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGS 357
             +  N I              D++  ++       ++R+Y   Q  S   ++  +  PG 
Sbjct: 886  ISFKNSIMLELDGPSLDRITEDAMLTMKSAAFHNVLVRKY-RFQTHSFNYNRAEVCLPGR 944

Query: 358  QIPKWFMYQN-EGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
            ++P+   +Q+   SSIT+       N++  +GF I  V   P   T  + +  +     +
Sbjct: 945  RVPREIKHQSTTSSSITI-------NISNSLGF-IFAVVVSPSKKTQQHGY--FVGMRCQ 994

Query: 417  C-SMDGSGEGHYIYFRGKFGH--VVS---DHLWLLFLPRHGHNWQFESNLIRLSFR---- 466
            C + DG  E   + ++ K+ H  + S   DH+++ + P H ++    S   ++SF+    
Sbjct: 995  CYTEDGKRE---VGYKSKWDHKPITSLNMDHVFVWYDPYH-YDSILSSIERKISFKFCIT 1050

Query: 467  ------SISDPTWKVKRCGFHPIYMHE 487
                     D    +K CG  PIY  E
Sbjct: 1051 TYTSSGKELDGLLSIKECGVCPIYYSE 1077



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 27/133 (20%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC-----SK 64
           L L  T I  +  SI  +  L  L L+   NL++LP+ +S L+ L  L +S C     SK
Sbjct: 718 LDLSKTGIKILHPSIGDMNNLIWLNLEDL-NLTNLPIELSHLRSLTELRVSKCNVVTKSK 776

Query: 65  LK---------------------KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           L+                     + P  ++S+E L +L LDG+S+ E+P+SI+ L  LE+
Sbjct: 777 LEALFEGLTLLRLLHLKDCCNLIELPANISSLESLHELRLDGSSVEELPASIKYLSELEI 836

Query: 104 LYLNECKNLVRLP 116
             L+ C  L  LP
Sbjct: 837 QSLDNCSKLRCLP 849


>gi|297726239|ref|NP_001175483.1| Os08g0265300 [Oryza sativa Japonica Group]
 gi|255678304|dbj|BAH94211.1| Os08g0265300 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 134/308 (43%), Gaps = 57/308 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L  L          P SI LL  L+ L L G   +S+L  +IS   CL  L+LS
Sbjct: 500 IGKLKQLRFLIAPNIGDNVFPKSITLLPKLKYLDLHGSFRISALQGSISKHACLIHLDLS 559

Query: 61  GCSKLKKF-PQIVASMEDLSKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVRLPSS 118
           GCS ++   P+ +  +  L  L L   SI ++ P +I  L  L+ L L+ C  L +LPS 
Sbjct: 560 GCSNIRVIQPEALCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSH 619

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  L  L+ LNLSGC  L  +P +   +++L  LD+SG +  +    +F           
Sbjct: 620 IGSLTELQYLNLSGCQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQVF----------- 668

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD------CGLGEAA 232
                                              G+  L  L+LS        G     
Sbjct: 669 ----------------------------------GGLTKLQYLNLSKIFGRTRVGDNWDG 694

Query: 233 IPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLP---QIPPNLQ 288
            P  I  L+ L+ L L+RN+ +  LP S+  L  L+ L+L  C+ L+SLP   ++  +L+
Sbjct: 695 YPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELIDSLE 754

Query: 289 FVRANGCS 296
           F+   GCS
Sbjct: 755 FLIVVGCS 762



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE----- 737
           L  L L+GC+ L +LP +   LK L  L+LSG S+ ++F ++     +L  ++L      
Sbjct: 626 LQYLNLSGCQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQVFGGLTKLQYLNLSKIFGR 685

Query: 738 ---GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
              G    G P +I  L+     NL     +  LP ++  L+ L+ +  S C  L+++  
Sbjct: 686 TRVGDNWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPH 745

Query: 795 TLGKVESLE 803
           ++  ++SLE
Sbjct: 746 SIELIDSLE 754



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 9/185 (4%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCN 181
           +L+ ++ S C KL    D     + L  LD++  +IR   SSI  +K LR L     G N
Sbjct: 458 TLRAVHTSNCSKLVLQGDEFSFTKFLRVLDLTDCSIRILPSSIGKLKQLRFLIAPNIGDN 517

Query: 182 EPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
             P S +    L + +L G  S  ++ +  S++    L  LDLS C       P  +  L
Sbjct: 518 VFPKSITLLPKLKYLDLHG--SFRISALQGSISKHACLIHLDLSGCSNIRVIQPEALCGL 575

Query: 241 HSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIP---PNLQFVRANGCS 296
             L+ L L+  + +  LP +I+ L  L+ L L +C  L  LP        LQ++  +GC 
Sbjct: 576 TKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNLSGCQ 635

Query: 297 SLVTL 301
            LV L
Sbjct: 636 GLVKL 640



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL-------S 716
           LS    + +L ++   L  LV L L+GC  ++   +    L  L  LNLS +        
Sbjct: 631 LSGCQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQVFGGLTKLQYLNLSKIFGRTRVGD 690

Query: 717 KFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
            +  +PE  S+ + L  ++L   + I  LP S+  L      +L  C++L+SLP +I  +
Sbjct: 691 NWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELI 750

Query: 776 RSLRMMYPSGCS 787
            SL  +   GCS
Sbjct: 751 DSLEFLIVVGCS 762



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 31/192 (16%)

Query: 678 ELLFGLVQL---TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           E L GL +L    L+ C  L+ LP  I++L  L  LNLS      + P    S  +L  +
Sbjct: 570 EALCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYL 629

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +L G                       C+ L  LP +   L++L  +  SGCS++++  +
Sbjct: 630 NLSG-----------------------CQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQ 666

Query: 795 TLGKVESLE-VRLSS-WNRPKMQNDFDCVEQSAVETVTKLAKAELLRDS--DSWKKNVDK 850
             G +  L+ + LS  + R ++ +++D   ++ + T+  L    L R+S  D   +++  
Sbjct: 667 VFGGLTKLQYLNLSKIFGRTRVGDNWDGYPET-ISTLNDLEYLNLSRNSRIDYLPRSLGN 725

Query: 851 CMKLSTTATSAC 862
             KL T   S C
Sbjct: 726 LKKLQTLDLSYC 737


>gi|413934802|gb|AFW69353.1| hypothetical protein ZEAMMB73_341496 [Zea mays]
          Length = 1368

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 23/308 (7%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC- 62
            +D   L + G S+     S+ L   L +L + GC  L  LP  ++ +K LR L+ SG  
Sbjct: 529 FRDCKRLQISGRSL-----SLTLSKFLRVLDISGCSMLG-LPSQLNQMKQLRYLDASGMQ 582

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           ++LK+  +  A ++ L+ L L      ++P  I  L  L  L L+ C  L+ +P SI  L
Sbjct: 583 NELKQ--ESFAGLKCLNALNLSAGYFQKLPVQIVNLEKLHYLNLHGCSRLMLIPESICEL 640

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG--TAIRRPTSSIFL--MKNLRSLYFS 178
           + L  L+LSGC  L  +P + GK+  L  LD+SG    +  P S   L  ++NL    F 
Sbjct: 641 RDLVHLDLSGCINLRVLPTSFGKLHKLSFLDMSGCLNLVSLPESFCDLRSLENLNLSSFH 700

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDI 237
              E P       H    +L  S+C    +LP S   +  L  L+LS C      +P D 
Sbjct: 701 ELRELPLGN----HQELLILDMSNCHKIQILPMSFCNLLHLEDLNLS-CCYELQELPEDF 755

Query: 238 DNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---N 293
                L+ L L N +   TLP S + L+N+E+L L DC  L  LP++   LQ ++    +
Sbjct: 756 GKNRGLRILDLSNCHRLQTLPDSFTDLVNIEKLILSDCWELVQLPELLGFLQKIQVLDLS 815

Query: 294 GCSSLVTL 301
            CS L  L
Sbjct: 816 CCSQLFAL 823



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 128/301 (42%), Gaps = 43/301 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            A +K L+ L L      ++P  I  L  L  L L GC  L  +P +I  L+ L  L+LS
Sbjct: 590 FAGLKCLNALNLSAGYFQKLPVQIVNLEKLHYLNLHGCSRLMLIPESICELRDLVHLDLS 649

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLE----------------- 102
           GC  L+  P     +  LS L + G  ++  +P S   L  LE                 
Sbjct: 650 GCINLRVLPTSFGKLHKLSFLDMSGCLNLVSLPESFCDLRSLENLNLSSFHELRELPLGN 709

Query: 103 -----LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
                +L ++ C  +  LP S   L  L+ LNLS C +L+ +P+  GK   L  LD+S  
Sbjct: 710 HQELLILDMSNCHKIQILPMSFCNLLHLEDLNLSCCYELQELPEDFGKNRGLRILDLSNC 769

Query: 158 -AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL-HLP--------FNLLGKSSCPVAL 207
             ++    S   + N+  L  S C        W L  LP          +L  S C    
Sbjct: 770 HRLQTLPDSFTDLVNIEKLILSDC--------WELVQLPELLGFLQKIQVLDLSCCSQLF 821

Query: 208 MLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
            LP S+T + +L  L+LS C +    +P D  +L  LK L ++    V +P  I+ + NL
Sbjct: 822 ALPESVTKLTNLEHLNLS-CCISLEKMPGDYGSLKKLKLLNISYCFKVRIPNGIANMSNL 880

Query: 267 E 267
           +
Sbjct: 881 K 881



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 14/241 (5%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           I  +P S   L  LE L L  C  L  LP      + LR L+LS C +L+  P     + 
Sbjct: 724 IQILPMSFCNLLHLEDLNLSCCYELQELPEDFGKNRGLRILDLSNCHRLQTLPDSFTDLV 783

Query: 77  DLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           ++ KL L D   + ++P  +  L  +++L L+ C  L  LP S+  L +L+ LNLS C  
Sbjct: 784 NIEKLILSDCWELVQLPELLGFLQKIQVLDLSCCSQLFALPESVTKLTNLEHLNLSCCIS 843

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL-------YFSGCNEPPASAS 188
           LE +P   G ++ L+ L++S     R  + I  M NL+ L       Y  G  +     S
Sbjct: 844 LEKMPGDYGSLKKLKLLNISYCFKVRIPNGIANMSNLKCLMAVGLDGYSCGNKDDFNIVS 903

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
             L +P   L K   P+        G+    +L L   GLG      + +NL   +   L
Sbjct: 904 SLLCMPRIDLSKKDSPIG----DFHGILKHKRLHLF--GLGNVQSIDEFENLGLCRHQQL 957

Query: 249 N 249
           N
Sbjct: 958 N 958



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 24/213 (11%)

Query: 647 CSRLW---EEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           CSRL    E   E  D+V + LS   ++R L  +   L  L  L ++GC NL  LP +  
Sbjct: 627 CSRLMLIPESICELRDLVHLDLSGCINLRVLPTSFGKLHKLSFLDMSGCLNLVSLPESFC 686

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASI-ELLSGNILSNLK 760
            L+ L  LNLS   + RE P    +  +LL + +     I+ LP S   LL    L NL 
Sbjct: 687 DLRSLENLNLSSFHELRELP--LGNHQELLILDMSNCHKIQILPMSFCNLLHLEDL-NLS 743

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS--WNRPKMQN-- 816
            C  L+ LP      R LR++  S C +L+ + ++   + ++E  + S  W   ++    
Sbjct: 744 CCYELQELPEDFGKNRGLRILDLSNCHRLQTLPDSFTDLVNIEKLILSDCWELVQLPELL 803

Query: 817 ---------DFDCVEQ--SAVETVTKLAKAELL 838
                    D  C  Q  +  E+VTKL   E L
Sbjct: 804 GFLQKIQVLDLSCCSQLFALPESVTKLTNLEHL 836



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 34/200 (17%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
            ++L + I  L  L  L L+GC  L  +P +I  L+ L  L+LSG    R  P       
Sbjct: 606 FQKLPVQIVNLEKLHYLNLHGCSRLMLIPESICELRDLVHLDLSGCINLRVLPTSFGKLH 665

Query: 730 QLLEIHLEGTA-IRGLPASI------------------ELLSGN----ILSNLKDCKNLK 766
           +L  + + G   +  LP S                   EL  GN    ++ ++ +C  ++
Sbjct: 666 KLSFLDMSGCLNLVSLPESFCDLRSLENLNLSSFHELRELPLGNHQELLILDMSNCHKIQ 725

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV-RLSSWNRPKMQNDFDCVEQSA 825
            LP +   L  L  +  S C +L+ + E  GK   L +  LS+ +R           Q+ 
Sbjct: 726 ILPMSFCNLLHLEDLNLSCCYELQELPEDFGKNRGLRILDLSNCHRL----------QTL 775

Query: 826 VETVTKLAKAELLRDSDSWK 845
            ++ T L   E L  SD W+
Sbjct: 776 PDSFTDLVNIEKLILSDCWE 795


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L +L L+   +  +P+ I  L  L+ L L   + L SLP  I  L+ L  L L 
Sbjct: 103 VGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNR-LKSLPKEIGKLQKLERLYLG 161

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L+  PQ + +++DL +L+L    +   P  I  L  L+ L L +   LV L   I 
Sbjct: 162 G-NQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLIL-DSNQLVVLSQEIG 219

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY-FSG 179
            L+SL+ L L    +L  +P+ +GK+++LEEL++S   +      I  ++NL++L+ +S 
Sbjct: 220 KLRSLERLILENN-QLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSN 278

Query: 180 CNEPPASASWHL------HLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
                    W L      HL  N L         +LP   G + +L  L L+   L   +
Sbjct: 279 QFRTLPKQIWQLQNLQDLHLAHNQLT--------VLPQEIGQLENLQSLILARNQL--KS 328

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           +P +I  L  LK L L  N    LP  I  L  LE+L LED  +L +LP+
Sbjct: 329 LPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLED-NQLTTLPK 377



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 29/266 (10%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L+L+   +  +   +  L  L  L L+  + L++LP  I  L+ L+ L L   ++L
Sbjct: 39  DVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQ-LATLPNEIGQLENLQVLSLYN-NRL 96

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           +  PQ V ++++L +L L+   +A +P+ I  L  L+ L L+  + L  LP  I  L+ L
Sbjct: 97  RTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNR-LKSLPKEIGKLQKL 155

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
           + L L G  +L  +P  +G ++ LEEL +S   ++     I  +++L+ L          
Sbjct: 156 ERLYLGGN-QLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILD------- 207

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
                           S  + ++   +  + SL +L L +  L  A +P++I  L +L+E
Sbjct: 208 ----------------SNQLVVLSQEIGKLRSLERLILENNQL--ATLPNEIGKLQNLEE 249

Query: 246 LYLNRNNFVTLPASISGLLNLEELEL 271
           L L+ N  VTLP  I  L NL+ L L
Sbjct: 250 LNLSNNQLVTLPQEIGALENLQNLHL 275



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 8/272 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  L LD   +  +   I  L  LE L L+  + L++LP  I  L+ L  L LS
Sbjct: 195 IGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQ-LATLPNEIGKLQNLEELNLS 253

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ + ++E+L  L+L       +P  I  L  L+ L+L   + L  LP  I 
Sbjct: 254 N-NQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQ-LTVLPQEIG 311

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L++L L+   +L+++P  +GK++ L+ L ++   +      I  ++ L  LY    
Sbjct: 312 QLENLQSLILARN-QLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDN 370

Query: 181 NEPPASAS-WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                    W L      L  ++  + L+   +  +  L  LDLS+  L    +P  I  
Sbjct: 371 QLTTLPKEIWKLE-KLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQL--RLLPQKIGK 427

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L  LK L L+ N   TLP  I  L  LE+L+L
Sbjct: 428 LEKLKYLDLSNNQLATLPKEIGKLEKLEDLDL 459



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 6/178 (3%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
            +++L DL+L    +T +P  I  L  L+ L L     L SLP  I  L+ L+ L L+  
Sbjct: 289 QLQNLQDLHLAHNQLTVLPQEIGQLENLQSLIL-ARNQLKSLPKEIGKLQKLKWLILAN- 346

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRL-PSSING 121
           ++L   PQ +  +E L  LYL+   +  +P  I  L  L+  YL+   N +RL P  I  
Sbjct: 347 NQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLK--YLDLANNQLRLLPEEIGK 404

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
           L+ L+ L+LS   +L  +P  +GK+E L+ LD+S   +      I  ++ L  L  SG
Sbjct: 405 LQKLEYLDLSNN-QLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSG 461



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 4/134 (2%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R LS  +  L  L +L L   + L  LP  I  L+ L  L+L   ++ R  P+   +  
Sbjct: 50  LRTLSQEVGTLQNLRELNLENNQ-LATLPNEIGQLENLQVLSLYN-NRLRTLPQEVGTLQ 107

Query: 730 QLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
            L E++LE   +  LP  I  L      NL + + LKSLP  I  L+ L  +Y  G ++L
Sbjct: 108 NLRELNLENNQLATLPNGIGQLENLQALNLHNNR-LKSLPKEIGKLQKLERLY-LGGNQL 165

Query: 790 KNVTETLGKVESLE 803
           + + + +G ++ LE
Sbjct: 166 RTLPQEIGTLQDLE 179


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 147/316 (46%), Gaps = 38/316 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L++LYL    +  +P  I  L  +E L+L   + L++LP  I  LK LR L+L+
Sbjct: 59  IGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQ-LTTLPKDIGKLKKLRELDLT 117

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + L   P+ +  +++L +LYL    +  +P  I  L  L  LYL +   L  LP  I 
Sbjct: 118 N-NLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYL-DGNQLKTLPKDIG 175

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L  LNL+    L  +P  +G +++L EL +    +      I  +KNL+ LY    
Sbjct: 176 KLQNLTELNLTNNP-LTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA- 233

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                                   +   LP+  G + SL +L+LS   +    +P DI  
Sbjct: 234 ------------------------LLTTLPNDIGYLKSLRELNLSGNQI--TTLPKDIGQ 267

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR-----ANG 294
           L +L+ LYL+ N   TLP  I  L NL EL+L    ++ +LP+    LQ +R      N 
Sbjct: 268 LQNLQVLYLSENQLATLPKEIGQLQNLRELDL-SGNQITTLPKEIGELQSLRELNLSGNQ 326

Query: 295 CSSLVTLFGALKLCRS 310
            ++L    G L+  R 
Sbjct: 327 ITTLPKEIGKLQSLRE 342



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 17/279 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L +L L    +T +P  I  L  L  L L   + L +LP  I  L+ LR L L 
Sbjct: 105 IGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQ-LKTLPKDIGQLQNLRELYLD 163

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL-ELLYLNECKNLVRLPSSI 119
           G ++LK  P+ +  +++L++L L    +  +P  I  L  L ELL +N    L  LP  I
Sbjct: 164 G-NQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLIN--NELTTLPKEI 220

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK+L+ L L     L  +P+ +G ++SL EL++SG  I      I  ++NL+ LY S 
Sbjct: 221 GKLKNLQVLYLGAL--LTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSE 278

Query: 180 ---CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPS 235
                 P            +L G         LP   G + SL +L+LS   +    +P 
Sbjct: 279 NQLATLPKEIGQLQNLRELDLSGNQIT----TLPKEIGELQSLRELNLSGNQI--TTLPK 332

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           +I  L SL+EL L  N   T+P  I  L NL+ L L+D 
Sbjct: 333 EIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDI 371



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 100/247 (40%), Gaps = 62/247 (25%)

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLE 150
           +P  I  L  L  LYL+    L  LP  I  L+ ++ L+LS   +L  +P  +GK++ L 
Sbjct: 55  LPKEIGELQNLTELYLS-SNQLKTLPKEIGKLQKIERLSLSNN-QLTTLPKDIGKLKKLR 112

Query: 151 ELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP 210
           ELD++   +      I  ++NLR LY            ++  L                 
Sbjct: 113 ELDLTNNLLTTLPKEIGQLQNLRELYL-----------YNNQL----------------- 144

Query: 211 SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELE 270
                                 +P DI  L +L+ELYL+ N   TLP  I  L NL EL 
Sbjct: 145 --------------------KTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELN 184

Query: 271 LEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALKLCRSKY------TIINCID 319
           L +   L +LP+   NL+      +  N  ++L    G LK  +  Y      T+ N I 
Sbjct: 185 LTNNP-LTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIG 243

Query: 320 SLKLLRK 326
            LK LR+
Sbjct: 244 YLKSLRE 250



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 21/173 (12%)

Query: 652 EEADEFPDIVQVLSDGTDIRELSL--------AIELLFGLVQLTLNGCKNLERLPRTISA 703
           +E   + ++ + L + TD+R LSL         I  L  L +L L+  + L+ LP+ I  
Sbjct: 26  QEIGTYHNLTEALQNPTDVRILSLHNNETLPKEIGELQNLTELYLSSNQ-LKTLPKEIGK 84

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDC- 762
           L+ +  L+LS  ++    P+      +L E+ L    +  LP  I       L NL++  
Sbjct: 85  LQKIERLSLSN-NQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEI-----GQLQNLRELY 138

Query: 763 ---KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRP 812
                LK+LP  I  L++LR +Y  G ++LK + + +GK+++L   L+  N P
Sbjct: 139 LYNNQLKTLPKDIGQLQNLRELYLDG-NQLKTLPKDIGKLQNL-TELNLTNNP 189


>gi|168012613|ref|XP_001758996.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689695|gb|EDQ76065.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 666

 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 154/303 (50%), Gaps = 12/303 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +++T +P+ +  LT L  L +  C  L+SLP  +  L  L TL +S CS L   P+   +
Sbjct: 349 SNLTSLPNELGNLTSLTTLNMGNCSKLTSLPNELGDLTSLTTLNISKCSSLVSLPKEFGN 408

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L + + +S+  +P  +E L  L    ++ C NL  LP+ ++ L SL T ++S C
Sbjct: 409 LTSLTTLDICECSSLTSLPKELENLISLTTFDISGCLNLTSLPNELSNLTSLTTFDISVC 468

Query: 134 CKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
             L ++P+ LG + SL   D+SG + +   ++ +  + +L +L    C++  +  +    
Sbjct: 469 SNLTSIPNELGNLTSLITFDISGCSNLTSLSNELGNLTSLTTLNMGNCSKLTSLPNELSD 528

Query: 193 L-PFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-N 249
           L     L  S C   + LP  L  + SLT LD+ +      ++  ++ NL SL  L + N
Sbjct: 529 LSSLTTLNLSKCSSLVSLPKKLDNLTSLTILDICESS-SLTSLSKELGNLTSLTILNMEN 587

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL---FG 303
           R   ++L   I  L++L  L++ +C  L  LP+   N   L  +  +GCSSL++L    G
Sbjct: 588 RLRLISLSNEIGNLISLTTLDICECSSLTLLPKELGNLTSLTTLNISGCSSLISLPNELG 647

Query: 304 ALK 306
            LK
Sbjct: 648 NLK 650



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 149/290 (51%), Gaps = 9/290 (3%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P+SI+ L  L  L ++GC +L+SLP  + +L  L  L++SGCSKL   P  + ++  L+
Sbjct: 18  LPTSIKNLLALRKLNIRGCSSLTSLPNELGNLTSLTILDISGCSKLTSLPNELYNLSSLT 77

Query: 80  KLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
            L + + +S+  +P  +  L  L  L ++ C NL  LP+ +  L SL  LN+S C +L  
Sbjct: 78  ILNIRNCSSLISLPKELGNLTSLTTLDISRCSNLTSLPNELCNLISLTILNISWCSRLTL 137

Query: 139 VPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FN 196
           +P+ L  + SL  L + G +++    + +  +K+L +LY   C+   +  +   +L    
Sbjct: 138 LPNELDNLISLTILIIGGYSSMTSLPNELDDLKSLTTLYMWWCSSLTSLPNKLRNLTSLT 197

Query: 197 LLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFV 254
               S C   + L + L    SLT L+++ C      +P+++ NL SL  L +   ++  
Sbjct: 198 TFDISGCSKLISLSNELGNFISLTTLNINKCS-SLVLLPNELGNLSSLTTLDICEYSSLT 256

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           +LP  +     L  L++ +C  L SLP+   N   L     +GC +L++L
Sbjct: 257 SLPKELGNFTTLTTLDICECSSLISLPKELGNFISLTTFDISGCLNLISL 306



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 17/299 (5%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P  +   T L  L +  C +L SLP  + +   L T ++SGC  L   P  +++
Sbjct: 253 SSLTSLPKELGNFTTLTTLDICECSSLISLPKELGNFISLTTFDISGCLNLISLPNELSN 312

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+   +   +++  +P+ +  L  L    ++ C NL  LP+ +  L SL TLN+  C
Sbjct: 313 LTSLTTFDISVFSNLTSIPNELGNLTSLITFDISGCSNLTSLPNELGNLTSLTTLNMGNC 372

Query: 134 CKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
            KL ++P+ LG + SL  L++S   + +  P        NL SL      E  +  S   
Sbjct: 373 SKLTSLPNELGDLTSLTTLNISKCSSLVSLPKE----FGNLTSLTTLDICECSSLTSLPK 428

Query: 192 HL----PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
            L           S C     LP+ L+ + SLT  D+S C     +IP+++ NL SL   
Sbjct: 429 ELENLISLTTFDISGCLNLTSLPNELSNLTSLTTFDISVCS-NLTSIPNELGNLTSLITF 487

Query: 247 YLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
            ++  +N  +L   +  L +L  L + +C +L SLP    +L  +     + CSSLV+L
Sbjct: 488 DISGCSNLTSLSNELGNLTSLTTLNMGNCSKLTSLPNELSDLSSLTTLNLSKCSSLVSL 546



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 21/289 (7%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           +T L++L LK C  L  LP +I +L  LR L + GCS L   P  + ++  L+ L + G 
Sbjct: 1   MTSLKILNLKECSRLRLLPTSIKNLLALRKLNIRGCSSLTSLPNELGNLTSLTILDISGC 60

Query: 87  S-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
           S +  +P+ +  L  L +L +  C +L+ LP  +  L SL TL++S C  L ++P+ L  
Sbjct: 61  SKLTSLPNELYNLSSLTILNIRNCSSLISLPKELGNLTSLTTLDISRCSNLTSLPNELCN 120

Query: 146 VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSS--- 202
           + SL  L++S  +  R T     + NL SL            S    LP  L    S   
Sbjct: 121 LISLTILNISWCS--RLTLLPNELDNLISLTI----LIIGGYSSMTSLPNELDDLKSLTT 174

Query: 203 -----CPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVT 255
                C     LP+ L  + SLT  D+S C     ++ +++ N  SL  L +N+ ++ V 
Sbjct: 175 LYMWWCSSLTSLPNKLRNLTSLTTFDISGCS-KLISLSNELGNFISLTTLNINKCSSLVL 233

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           LP  +  L +L  L++ +   L SLP+   N   L  +    CSSL++L
Sbjct: 234 LPNELGNLSSLTTLDICEYSSLTSLPKELGNFTTLTTLDICECSSLISL 282



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 14/283 (4%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L +L + GC  L+SLP  + +L  L  L +  CS L   P+ + +
Sbjct: 37  SSLTSLPNELGNLTSLTILDISGCSKLTSLPNELYNLSSLTILNIRNCSSLISLPKELGN 96

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L +   S +  +P+ +  L  L +L ++ C  L  LP+ ++ L SL  L + G 
Sbjct: 97  LTSLTTLDISRCSNLTSLPNELCNLISLTILNISWCSRLTLLPNELDNLISLTILIIGGY 156

Query: 134 CKLENVPDTLGKVESLEELDV--SGTAIRRPTSSIFLMKNLRSLY---FSGCNEPPA-SA 187
             + ++P+ L  ++SL  L +    +    P      ++NL SL     SGC++  + S 
Sbjct: 157 SSMTSLPNELDDLKSLTTLYMWWCSSLTSLPNK----LRNLTSLTTFDISGCSKLISLSN 212

Query: 188 SWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                +    L  + C   ++LP+ L  + SLT LD+ +      ++P ++ N  +L  L
Sbjct: 213 ELGNFISLTTLNINKCSSLVLLPNELGNLSSLTTLDICEYS-SLTSLPKELGNFTTLTTL 271

Query: 247 YLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            +   ++ ++LP  +   ++L   ++  C  L SLP    NL 
Sbjct: 272 DICECSSLISLPKELGNFISLTTFDISGCLNLISLPNELSNLT 314



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 109/222 (49%), Gaps = 22/222 (9%)

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG- 156
           +  L++L L EC  L  LP+SI  L +L+ LN+ GC  L ++P+ LG + SL  LD+SG 
Sbjct: 1   MTSLKILNLKECSRLRLLPTSIKNLLALRKLNIRGCSSLTSLPNELGNLTSLTILDISGC 60

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL--------LGKSSCPVALM 208
           + +    + ++ + +L  L    C       S  + LP  L        L  S C     
Sbjct: 61  SKLTSLPNELYNLSSLTILNIRNC-------SSLISLPKELGNLTSLTTLDISRCSNLTS 113

Query: 209 LPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNL 266
           LP+ L  + SLT L++S C      +P+++DNL SL  L +   ++  +LP  +  L +L
Sbjct: 114 LPNELCNLISLTILNISWCS-RLTLLPNELDNLISLTILIIGGYSSMTSLPNELDDLKSL 172

Query: 267 EELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGAL 305
             L +  C  L SLP    NL  +     +GCS L++L   L
Sbjct: 173 TTLYMWWCSSLTSLPNKLRNLTSLTTFDISGCSKLISLSNEL 214



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 25/154 (16%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-------------- 72
           LT L  L +  C  L+SLP  +S L  L TL LS CS L   P+ +              
Sbjct: 505 LTSLTTLNMGNCSKLTSLPNELSDLSSLTTLNLSKCSSLVSLPKKLDNLTSLTILDICES 564

Query: 73  ASMEDLSKLYLDGTSIA-----------EVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           +S+  LSK   + TS+             + + I  L  L  L + EC +L  LP  +  
Sbjct: 565 SSLTSLSKELGNLTSLTILNMENRLRLISLSNEIGNLISLTTLDICECSSLTLLPKELGN 624

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
           L SL TLN+SGC  L ++P+ LG ++SL  L+ S
Sbjct: 625 LTSLTTLNISGCSSLISLPNELGNLKSLTTLNKS 658



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 28/209 (13%)

Query: 600 SMVSQAKAISQQ-GQFVKMISVD-SGC---MSCYKKWGRQTVRRQSPQEPGNCSRLWEEA 654
           S+ S   +I  + G    +I+ D SGC    S   + G  T    +    GNCS+L    
Sbjct: 322 SVFSNLTSIPNELGNLTSLITFDISGCSNLTSLPNELGNLT--SLTTLNMGNCSKLTSLP 379

Query: 655 DEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           +E  D+                      L  L ++ C +L  LP+    L  L+TL++  
Sbjct: 380 NELGDLTS--------------------LTTLNISKCSSLVSLPKEFGNLTSLTTLDICE 419

Query: 715 LSKFREFPEITSSRDQLLEIHLEGTA-IRGLPASIELLSGNILSNLKDCKNLKSLPSTIN 773
            S     P+   +   L    + G   +  LP  +  L+     ++  C NL S+P+ + 
Sbjct: 420 CSSLTSLPKELENLISLTTFDISGCLNLTSLPNELSNLTSLTTFDISVCSNLTSIPNELG 479

Query: 774 GLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L SL     SGCS L +++  LG + SL
Sbjct: 480 NLTSLITFDISGCSNLTSLSNELGNLTSL 508



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 30/225 (13%)

Query: 595 MCCINSMVSQAKAISQQGQFVKMISVD-SGCMSCYKKWGRQTVRRQSPQEPGNCSRLWE- 652
           +C  +S++S  K   + G F+ + + D SGC++              P E  N + L   
Sbjct: 273 ICECSSLISLPK---ELGNFISLTTFDISGCLNLISL----------PNELSNLTSLTTF 319

Query: 653 EADEFPDIVQVLSDGTDIREL------------SLAIEL--LFGLVQLTLNGCKNLERLP 698
           +   F ++  + ++  ++  L            SL  EL  L  L  L +  C  L  LP
Sbjct: 320 DISVFSNLTSIPNELGNLTSLITFDISGCSNLTSLPNELGNLTSLTTLNMGNCSKLTSLP 379

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS 757
             +  L  L+TLN+S  S     P+   +   L  + + E +++  LP  +E L      
Sbjct: 380 NELGDLTSLTTLNISKCSSLVSLPKEFGNLTSLTTLDICECSSLTSLPKELENLISLTTF 439

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           ++  C NL SLP+ ++ L SL     S CS L ++   LG + SL
Sbjct: 440 DISGCLNLTSLPNELSNLTSLTTFDISVCSNLTSIPNELGNLTSL 484



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R L  +I+ L  L +L + GC +L  LP  +  L  L+ L++SG SK    P    +  
Sbjct: 15  LRLLPTSIKNLLALRKLNIRGCSSLTSLPNELGNLTSLTILDISGCSKLTSLPNELYNLS 74

Query: 730 QLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSK 788
            L  +++   +++  LP  +  L+     ++  C NL SLP+ +  L SL ++  S CS+
Sbjct: 75  SLTILNIRNCSSLISLPKELGNLTSLTTLDISRCSNLTSLPNELCNLISLTILNISWCSR 134

Query: 789 LKNVTETLGKVESLEV 804
           L  +   L  + SL +
Sbjct: 135 LTLLPNELDNLISLTI 150



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 34/212 (16%)

Query: 600 SMVSQAKAISQQ-GQFVKMISVD-SGC---MSCYKKWGRQTVRRQSPQEPGNCSRLWEEA 654
           S+ S   +I  + G    +I+ D SGC    S   + G  T    +    GNCS+L    
Sbjct: 466 SVCSNLTSIPNELGNLTSLITFDISGCSNLTSLSNELGNLT--SLTTLNMGNCSKLTSLP 523

Query: 655 DEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG 714
           +E  D                    L  L  L L+ C +L  LP+ +  L  L+ L++  
Sbjct: 524 NELSD--------------------LSSLTTLNLSKCSSLVSLPKKLDNLTSLTILDICE 563

Query: 715 LSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS----NLKDCKNLKSLPS 770
            S      +   +   L  +++E   +R +  S E+  GN++S    ++ +C +L  LP 
Sbjct: 564 SSSLTSLSKELGNLTSLTILNMEN-RLRLISLSNEI--GNLISLTTLDICECSSLTLLPK 620

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            +  L SL  +  SGCS L ++   LG ++SL
Sbjct: 621 ELGNLTSLTTLNISGCSSLISLPNELGNLKSL 652



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 66/177 (37%), Gaps = 38/177 (21%)

Query: 641 PQEPGNCSRLWE----EADEFPDIVQVLSDGT-----DIRELSLAIEL------LFGLVQ 685
           P E GN S L      E      + + L + T     DI E S  I L         L  
Sbjct: 235 PNELGNLSSLTTLDICEYSSLTSLPKELGNFTTLTTLDICECSSLISLPKELGNFISLTT 294

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
             ++GC NL  LP  +S L  L+T ++S  S     P    +   L+   + G       
Sbjct: 295 FDISGCLNLISLPNELSNLTSLTTFDISVFSNLTSIPNELGNLTSLITFDISG------- 347

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
                           C NL SLP+ +  L SL  +    CSKL ++   LG + SL
Sbjct: 348 ----------------CSNLTSLPNELGNLTSLTTLNMGNCSKLTSLPNELGDLTSL 388



 Score = 40.8 bits (94), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 77/187 (41%), Gaps = 34/187 (18%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL------LFGL 683
           P E GN           CS+L    +E  ++  +     +IR  S  I L      L  L
Sbjct: 43  PNELGNLTSLTILDISGCSKLTSLPNELYNLSSL--TILNIRNCSSLISLPKELGNLTSL 100

Query: 684 VQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRG 743
             L ++ C NL  LP  +  L  L+ LN+S  S+    P      D L  I L    I G
Sbjct: 101 TTLDISRCSNLTSLPNELCNLISLTILNISWCSRLTLLPN---ELDNL--ISLTILIIGG 155

Query: 744 LPASIELLSGNILSNLKD--------CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
             +   L   N L +LK         C +L SLP+ +  L SL     SGCSKL +++  
Sbjct: 156 YSSMTSL--PNELDDLKSLTTLYMWWCSSLTSLPNKLRNLTSLTTFDISGCSKLISLSNE 213

Query: 796 LGKVESL 802
           LG   SL
Sbjct: 214 LGNFISL 220


>gi|224143578|ref|XP_002336058.1| predicted protein [Populus trichocarpa]
 gi|222869691|gb|EEF06822.1| predicted protein [Populus trichocarpa]
          Length = 722

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 97/188 (51%), Gaps = 27/188 (14%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           +D  S+TEVP S++ L  LE L L  C NL S P+  S  K L+ L +S C  + K P I
Sbjct: 323 VDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDS--KVLKVLSISRCLDMTKCPTI 380

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR----------------- 114
             +M+ L   YL+ TSI EVP SI     LE L L+ C  + +                 
Sbjct: 381 SQNMKSL---YLEETSIKEVPQSIT--SKLENLGLHGCSKITKFPEISGDVKTLYLSGTA 435

Query: 115 ---LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
              +PSSI  L  L  L++SGC KLE+ P+    ++SL +L++S T I+   SS   M +
Sbjct: 436 IKEVPSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSLVDLNLSKTGIKEIPSSFKQMIS 495

Query: 172 LRSLYFSG 179
           LRSL   G
Sbjct: 496 LRSLGLDG 503



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 154/382 (40%), Gaps = 87/382 (22%)

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           LS    L + P +  +   +S   +D  S+ EVP S++ L  LE L LN C NL   P  
Sbjct: 299 LSYSPYLTELPDLSKARNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFP-- 356

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF- 177
           +   K LK L++S C  +   P                           + +N++SLY  
Sbjct: 357 MLDSKVLKVLSISRCLDMTKCPT--------------------------ISQNMKSLYLE 390

Query: 178 -SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            +   E P S +  L      LG   C      P ++G                      
Sbjct: 391 ETSIKEVPQSITSKL----ENLGLHGCSKITKFPEISG---------------------- 424

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP-PNLQFVRAN-- 293
                 +K LYL+      +P+SI  L  L  L++  C +L+S P+I  P    V  N  
Sbjct: 425 -----DVKTLYLSGTAIKEVPSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSLVDLNLS 479

Query: 294 --GCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN--GLAISMLREYLELQAVSD-PGH 348
             G   + + F  +   RS       I+ L L  K+   L  +M   +L++Q+    P  
Sbjct: 480 KTGIKEIPSSFKQMISLRSLGLDGTPIEELPLSIKDMKPLIAAM---HLKIQSGDKIPYD 536

Query: 349 KLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFH 408
           ++ +V PGS+IP+WF  +  GSS+T+  P+   N +++ G A C VF +P          
Sbjct: 537 RIQMVLPGSEIPEWFSDKGIGSSLTIQLPT---NCHQLKGIAFCLVFLLP---------- 583

Query: 409 SYPAHELECSMDGSGEGHYIYF 430
             P+HE+    D   E   +YF
Sbjct: 584 -LPSHEMLYEFDDHPEVR-VYF 603



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 1/91 (1%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  LYL GT+I EVPSSI+ LT L +L + GC  L S P     +K L  L LS  + +
Sbjct: 425 DVKTLYLSGTAIKEVPSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSLVDLNLSK-TGI 483

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
           K+ P     M  L  L LDGT I E+P SI+
Sbjct: 484 KEIPSSFKQMISLRSLGLDGTPIEELPLSIK 514



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 23/141 (16%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLR--------- 55
           +++  LYL+ TSI EVP SI   + LE L L GC  ++  P     +K L          
Sbjct: 382 QNMKSLYLEETSIKEVPQSIT--SKLENLGLHGCSKITKFPEISGDVKTLYLSGTAIKEV 439

Query: 56  -----------TLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELL 104
                       L++SGCSKL+ FP+I   M+ L  L L  T I E+PSS + +  L  L
Sbjct: 440 PSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSLVDLNLSKTGIKEIPSSFKQMISLRSL 499

Query: 105 YLNECKNLVRLPSSINGLKSL 125
            L+    +  LP SI  +K L
Sbjct: 500 GLDGTP-IEELPLSIKDMKPL 519



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS++ +  +   D+  +   GT I+E+  +I+ L  L  L ++GC  LE  P     +K 
Sbjct: 413 CSKITKFPEISGDVKTLYLSGTAIKEVPSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKS 472

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           L  LNLS  +  +E P        L  + L+GT I  LP SI+
Sbjct: 473 LVDLNLSK-TGIKEIPSSFKQMISLRSLGLDGTPIEELPLSIK 514



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 5/86 (5%)

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
           +++ +P++I++   L  L L G SK  +FPEI+     L   +L GTAI+ +P+SI+ L+
Sbjct: 393 SIKEVPQSITS--KLENLGLHGCSKITKFPEISGDVKTL---YLSGTAIKEVPSSIQFLT 447

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSL 778
              + ++  C  L+S P     ++SL
Sbjct: 448 RLCVLDMSGCSKLESFPEIAVPMKSL 473



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 30/172 (17%)

Query: 656 EFPDIVQV-------LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           E PD+ +        L D   + E+  +++ L  L +L LN C NL   P   S  K L 
Sbjct: 307 ELPDLSKARNLVSLRLVDCPSLTEVPFSLQYLDKLEELDLNFCYNLRSFPMLDS--KVLK 364

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL------------------ 750
            L++S      + P I+ +   L   +LE T+I+ +P SI                    
Sbjct: 365 VLSISRCLDMTKCPTISQNMKSL---YLEETSIKEVPQSITSKLENLGLHGCSKITKFPE 421

Query: 751 LSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +SG++ +       +K +PS+I  L  L ++  SGCSKL++  E    ++SL
Sbjct: 422 ISGDVKTLYLSGTAIKEVPSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSL 473



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSG 753
           ++ +P +I  L  L  L++SG SK   FPEI      L++++L  T I+ +P+S + +  
Sbjct: 436 IKEVPSSIQFLTRLCVLDMSGCSKLESFPEIAVPMKSLVDLNLSKTGIKEIPSSFKQMI- 494

Query: 754 NILSNLKDCKNLKSLPSTINGLRSL 778
           ++ S   D   ++ LP +I  ++ L
Sbjct: 495 SLRSLGLDGTPIEELPLSIKDMKPL 519


>gi|357499585|ref|XP_003620081.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
 gi|355495096|gb|AES76299.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
          Length = 1076

 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 179/446 (40%), Gaps = 93/446 (20%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M    ++ +L LD          +  L  LE+ + +GCKNL  +  +   L  L  L  +
Sbjct: 630 MKMFVNMRELNLDKCQFLTRIHDVSNLPNLEIFSFQGCKNLIEIHRSFGFLNKLEILNAT 689

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GCSKL +FP     M+ +S                     L  L L+ C++L   P  + 
Sbjct: 690 GCSKLMRFP----PMKSMS---------------------LRELMLSYCESLKTFPEILG 724

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            +K++  + L+    +E +P +   +  L  L + G  + R  SSIF M NL  +  +GC
Sbjct: 725 EVKNITYITLTDT-SIEKLPVSFQNLTGLSNLKIKGKGMLRLPSSIFRMPNLSDITANGC 783

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           +L K     +    S+   C    + L  C L +  +P  +   
Sbjct: 784 ----------------ILSKLDDKFS----SMVFTCP-NDIKLKKCNLSDEFLPILVMWS 822

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            +++ L L+ N+F  LP  I     L +L L+DCK L+ +  IPPNL+++ A  C SL +
Sbjct: 823 ANVEILDLSGNSFTILPECIKDCRFLSKLTLDDCKCLREIRGIPPNLKYLSAKCCKSLTS 882

Query: 301 LFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPG-SQI 359
                     K  ++N                      EL    D        F G ++I
Sbjct: 883 --------SCKNMLLN---------------------QELHEAGDT----KFCFSGFAKI 909

Query: 360 PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
           P+WF +QN G++I+       +  NK    A+C    +   S  T   + +  H+   ++
Sbjct: 910 PEWFEHQNMGNTIS------FWFRNKHPSMALC----ISTKSVDT-TSNDFDLHKTSPTL 958

Query: 420 DGSGEGHYIY-FRGKFGHVVSDHLWL 444
              G  + +Y    KFG + + H +L
Sbjct: 959 IIHGNKYDLYILLTKFGKMWTHHTYL 984



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 54/124 (43%), Gaps = 25/124 (20%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSK----------------------FREFPE 723
            +  GCKNL  + R+   L  L  LN +G SK                       + FPE
Sbjct: 662 FSFQGCKNLIEIHRSFGFLNKLEILNATGCSKLMRFPPMKSMSLRELMLSYCESLKTFPE 721

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK-DCKNLKSLPSTINGLRSLRMMY 782
           I      +  I L  T+I  LP S + L+G  LSNLK   K +  LPS+I  + +L  + 
Sbjct: 722 ILGEVKNITYITLTDTSIEKLPVSFQNLTG--LSNLKIKGKGMLRLPSSIFRMPNLSDIT 779

Query: 783 PSGC 786
            +GC
Sbjct: 780 ANGC 783


>gi|296083367|emb|CBI23256.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 132/249 (53%), Gaps = 24/249 (9%)

Query: 250 RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
           RN  V++PA IS L NL+ L +  C++LQ +P++PP+++ + A  C+SL++L    ++  
Sbjct: 236 RNYMVSIPADISKLSNLKVLLVRQCEQLQKIPKLPPSIKLLDACDCTSLMSLPTPSRIIS 295

Query: 310 SKYTIINC-IDSLKLLRKN--GL---AISMLREYLELQAVSDPGHKLSIVFPGSQIPKWF 363
            ++ +++  +  ++ +  N  GL    ++M  E L  +   + G+  SI+ PGS+IPKW 
Sbjct: 296 PQHWLVSTWLRPVEFMLWNCSGLYQDHVAMALEKLHQKLFPEIGY--SILIPGSRIPKWA 353

Query: 364 MYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSG 423
            ++N G+S++ T P    + N ++G A+C VF +   +  T           EC  +G  
Sbjct: 354 WHENMGASVSATLPPDWLDDN-LLGIALCGVFAL--EAGETIQRPGGICCNFECR-EGPY 409

Query: 424 EGHYIYFRGKFGHVV-SDHLWLLFLPRHGHNWQF-ESNLIRLSFR------SISDPTWKV 475
             H I +      VV +DH+W+++ PR     QF +S  I   F+      S+S  + +V
Sbjct: 410 FSHSISWTHSGDRVVETDHVWMVYQPRT----QFVKSKSICARFKHIKAYFSLSGASHEV 465

Query: 476 KRCGFHPIY 484
           K+C    IY
Sbjct: 466 KKCAIRLIY 474



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 124/232 (53%), Gaps = 23/232 (9%)

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
           E  I + + +L  L+ L L+RN  V++PA IS L NL+ L +  C++LQ +P++PPN++ 
Sbjct: 2   EGTIDNKLCHLELLEVLNLSRNYMVSIPADISRLSNLKVLLVRQCEKLQKIPKLPPNIKL 61

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINC-IDSLKLLRKN--GL---AISMLREYLELQAV 343
           + A  C+SL +L     +   ++ +++  +  ++ +  N  GL    ++M  E L  +  
Sbjct: 62  LDACDCTSLRSLSTPSWMISLQHRLVSTWLRPVEFMLWNCSGLYQDHVAMALETLHQKLF 121

Query: 344 SDPGHKLSIVFPGSQIPKWFMYQNEGSSITVT-RPSYLYNVNKVVGFAICCVFQVPKHST 402
            + G+  SI+ PGS+IPK   ++N G+S++ T RP +L   N  +G A+C VF + +  T
Sbjct: 122 PEIGY--SILIPGSRIPKGRWHENMGASVSATLRPHWLD--NNFLGVALCAVFALEEGET 177

Query: 403 GTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGH-----VVSDHLWLLFLPR 449
                      E+ C  +  GEG Y      + H     V +DH+ +++ PR
Sbjct: 178 IQR------PGEIRCIFE-CGEGPYFSHSITWTHSGDRVVETDHVCMMYQPR 222


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 135/282 (47%), Gaps = 32/282 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L LD   +T VP+ I  LT LE+L L+    L+S+P  I  L  L    LS
Sbjct: 69  IGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLE-SNQLTSVPAEIGQLASLEVFYLS 127

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L  L L    +  VP+ I  +  LE L+LNE + L  LP+ I 
Sbjct: 128 -RNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEALWLNENQ-LTSLPAEIG 185

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SLK L L G  +L +VP  +G++  LE L +    +   TS    +  L SL F   
Sbjct: 186 QLTSLKELGLGGN-QLTSVPADIGQLTLLEGLSLDSNQL---TSVPAEIGQLASLKF--- 238

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTK-LDLSDCGLGEAAIPSDIDN 239
                     LHL  N L          +P+  G  +L + L+L    L   ++P++I  
Sbjct: 239 ----------LHLQGNQLAS--------VPAEIGQLTLLEGLNLESNQL--TSVPAEIGQ 278

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L SLK L L+RN   ++PA I  L +L+ L LE   +L S+P
Sbjct: 279 LASLKRLILSRNQLTSVPAEIGQLSSLDGLNLER-NQLTSVP 319



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 6/239 (2%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           ++P  +  L  LR L L G ++L   P  +  +  L +L LD   +  VP+ I  L  LE
Sbjct: 41  AVPAELGRLSALRKLNL-GRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLE 99

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
           +LYL E   L  +P+ I  L SL+   LS   +L ++P  +G++  LE L ++   +   
Sbjct: 100 VLYL-ESNQLTSVPAEIGQLASLEVFYLS-RNQLTSLPAEIGQLTLLEGLSLARNQLTSV 157

Query: 163 TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD 222
            + I+ +  L +L+ +        A          LG     +  +   +  +  L  L 
Sbjct: 158 PAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLS 217

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L    L   ++P++I  L SLK L+L  N   ++PA I  L  LE L LE   +L S+P
Sbjct: 218 LDSNQL--TSVPAEIGQLASLKFLHLQGNQLASVPAEIGQLTLLEGLNLE-SNQLTSVP 273



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 34/228 (14%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           LEL         P  +  +  L KL L    +  VP+ I  L  LE L L+  + L  +P
Sbjct: 31  LELEDVGLTGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQ-LTSVP 89

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG---TAIRRPTSSIFLMKNLR 173
           + I  L SL+ L L    +L +VP  +G++ SLE   +S    T++      + L++ L 
Sbjct: 90  AEIGQLTSLEVLYLE-SNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGL- 147

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           SL  +     PA   W                         + +L  L L++  L   ++
Sbjct: 148 SLARNQLTSVPAEI-WQ------------------------ITALEALWLNENQL--TSL 180

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           P++I  L SLKEL L  N   ++PA I  L  LE L L D  +L S+P
Sbjct: 181 PAEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSL-DSNQLTSVP 227



 Score = 46.6 bits (109), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           + +L+L D GL   A+P+++  L +L++L L RN   ++PA I  L +LEEL L D  +L
Sbjct: 28  VVELELEDVGL-TGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRL-DRNQL 85

Query: 278 QSLP 281
            S+P
Sbjct: 86  TSVP 89



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 14/112 (12%)

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           + +L KL+L    L   ++P++I  L SL+EL L+RN   ++PA I  L +LE L LE  
Sbjct: 49  LSALRKLNLGRNQL--TSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLE-S 105

Query: 275 KRLQSLPQIPPNLQ-----FVRANGCSSL------VTLFGALKLCRSKYTII 315
            +L S+P     L      ++  N  +SL      +TL   L L R++ T +
Sbjct: 106 NQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSV 157


>gi|356522390|ref|XP_003529829.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1086

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 196/442 (44%), Gaps = 46/442 (10%)

Query: 32  LLTLKGCKNLSSLPVTISSLKCLRTLEL---SGCSKLKK-----FPQIVASM-EDLSKLY 82
           ++ L G K L   P   + +  L  L+      CS L++      PQ + S+  +L  L 
Sbjct: 573 VINLSGIKQLQLNPQVFAKMSKLYFLDFYNKGSCSCLREQGGLYLPQGLESLSNELRYLR 632

Query: 83  LDGTSIAEVPS--SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVP 140
                +  +PS  S E L  L L Y      + +L  ++  L +++ L L    +L+ +P
Sbjct: 633 WTHYPLESLPSKFSAENLVELNLPY----SRVKKLWQAVPDLVNMRILILHSSTQLKELP 688

Query: 141 DTLGKVESLEELDVS---GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL-PFN 196
           D L K  +L+ +D+    G     P  S+F +K L  LY  GC    +  S ++HL    
Sbjct: 689 D-LSKATNLKVMDLRFCVGLTSVHP--SVFSLKKLEKLYLGGCFSLRSLRS-NIHLDSLR 744

Query: 197 LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL 256
            L    C ++L   S+T   ++ +L+L    + +  +PS I     L++L L       L
Sbjct: 745 YLSLYGC-MSLKYFSVTS-KNMVRLNLELTSIKQ--LPSSIGLQSKLEKLRLAYTYIENL 800

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF------GALKLCRS 310
           P SI  L  L  L++  C+ L++LP++PP+L+ + A GC SL T+         LK  + 
Sbjct: 801 PTSIKHLTKLRHLDVRHCRELRTLPELPPSLETLDARGCVSLETVMFPSTAGEQLKENKK 860

Query: 311 KYTIINCID----SLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
           +    NC+     SLK +  N   I+M++   +  +     H+ + V+PGS++P+W +++
Sbjct: 861 RVAFWNCLKLDEHSLKAIELNA-QINMMKFAHQHLSTFGDAHQGTYVYPGSKVPEWLVHK 919

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGH 426
                      S++   +          F VP+      +       E + S  G GEG 
Sbjct: 920 TIQRDYVTIDLSFVLAPHSSDHLGFIFGFVVPEVPNEGLVL------EFKISTGGEGEGS 973

Query: 427 YI--YFRGKFGHVVSDHLWLLF 446
            I  Y       + SDH++L++
Sbjct: 974 NINVYLDRPRHGIKSDHVYLMY 995



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 30/191 (15%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK-------- 66
           T + E+P  +   T L+++ L+ C  L+S+  ++ SLK L  L L GC  L+        
Sbjct: 682 TQLKELPD-LSKATNLKVMDLRFCVGLTSVHPSVFSLKKLEKLYLGGCFSLRSLRSNIHL 740

Query: 67  ---KFPQIVASM---------EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
              ++  +   M         +++ +L L+ TSI ++PSSI L   LE L L     +  
Sbjct: 741 DSLRYLSLYGCMSLKYFSVTSKNMVRLNLELTSIKQLPSSIGLQSKLEKLRL-AYTYIEN 799

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-----TAIRRPTSSIFLM 169
           LP+SI  L  L+ L++  C +L  +P+      SLE LD  G     T +   T+   L 
Sbjct: 800 LPTSIKHLTKLRHLDVRHCRELRTLPEL---PPSLETLDARGCVSLETVMFPSTAGEQLK 856

Query: 170 KNLRSLYFSGC 180
           +N + + F  C
Sbjct: 857 ENKKRVAFWNC 867



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K++  L L+ TSI ++PSSI L + LE L L     + +LP +I  L  LR L++  C +
Sbjct: 762 KNMVRLNLELTSIKQLPSSIGLQSKLEKLRL-AYTYIENLPTSIKHLTKLRHLDVRHCRE 820

Query: 65  LKKFPQIVASMEDL 78
           L+  P++  S+E L
Sbjct: 821 LRTLPELPPSLETL 834


>gi|222640226|gb|EEE68358.1| hypothetical protein OsJ_26662 [Oryza sativa Japonica Group]
          Length = 1048

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 134/308 (43%), Gaps = 57/308 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L  L          P SI LL  L+ L L G   +S+L  +IS   CL  L+LS
Sbjct: 464 IGKLKQLRFLIAPNIGDNVFPKSITLLPKLKYLDLHGSFRISALQGSISKHACLIHLDLS 523

Query: 61  GCSKLKKF-PQIVASMEDLSKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVRLPSS 118
           GCS ++   P+ +  +  L  L L   SI ++ P +I  L  L+ L L+ C  L +LPS 
Sbjct: 524 GCSNIRVIQPEALCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSH 583

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  L  L+ LNLSGC  L  +P +   +++L  LD+SG +  +    +F           
Sbjct: 584 IGSLTELQYLNLSGCQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQVF----------- 632

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD------CGLGEAA 232
                                              G+  L  L+LS        G     
Sbjct: 633 ----------------------------------GGLTKLQYLNLSKIFGRTRVGDNWDG 658

Query: 233 IPSDIDNLHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLP---QIPPNLQ 288
            P  I  L+ L+ L L+RN+ +  LP S+  L  L+ L+L  C+ L+SLP   ++  +L+
Sbjct: 659 YPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELIDSLE 718

Query: 289 FVRANGCS 296
           F+   GCS
Sbjct: 719 FLIVVGCS 726



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE----- 737
           L  L L+GC+ L +LP +   LK L  L+LSG S+ ++F ++     +L  ++L      
Sbjct: 590 LQYLNLSGCQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQVFGGLTKLQYLNLSKIFGR 649

Query: 738 ---GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
              G    G P +I  L+     NL     +  LP ++  L+ L+ +  S C  L+++  
Sbjct: 650 TRVGDNWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPH 709

Query: 795 TLGKVESLE 803
           ++  ++SLE
Sbjct: 710 SIELIDSLE 718



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 9/185 (4%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCN 181
           +L+ ++ S C KL    D     + L  LD++  +IR   SSI  +K LR L     G N
Sbjct: 422 TLRAVHTSNCSKLVLQGDEFSFTKFLRVLDLTDCSIRILPSSIGKLKQLRFLIAPNIGDN 481

Query: 182 EPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
             P S +    L + +L G  S  ++ +  S++    L  LDLS C       P  +  L
Sbjct: 482 VFPKSITLLPKLKYLDLHG--SFRISALQGSISKHACLIHLDLSGCSNIRVIQPEALCGL 539

Query: 241 HSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIP---PNLQFVRANGCS 296
             L+ L L+  + +  LP +I+ L  L+ L L +C  L  LP        LQ++  +GC 
Sbjct: 540 TKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNLSGCQ 599

Query: 297 SLVTL 301
            LV L
Sbjct: 600 GLVKL 604



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 31/192 (16%)

Query: 678 ELLFGLVQL---TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           E L GL +L    L+ C  L+ LP  I++L  L  LNLS      + P    S  +L  +
Sbjct: 534 EALCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYL 593

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +L G                       C+ L  LP +   L++L  +  SGCS++++  +
Sbjct: 594 NLSG-----------------------CQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQ 630

Query: 795 TLGKVESLE-VRLSS-WNRPKMQNDFDCVEQSAVETVTKLAKAELLRDS--DSWKKNVDK 850
             G +  L+ + LS  + R ++ +++D   ++ + T+  L    L R+S  D   +++  
Sbjct: 631 VFGGLTKLQYLNLSKIFGRTRVGDNWDGYPET-ISTLNDLEYLNLSRNSRIDYLPRSLGN 689

Query: 851 CMKLSTTATSAC 862
             KL T   S C
Sbjct: 690 LKKLQTLDLSYC 701



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL-------S 716
           LS    + +L ++   L  LV L L+GC  ++   +    L  L  LNLS +        
Sbjct: 595 LSGCQGLVKLPMSFRNLKNLVHLDLSGCSRVQDFKQVFGGLTKLQYLNLSKIFGRTRVGD 654

Query: 717 KFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
            +  +PE  S+ + L  ++L   + I  LP S+  L      +L  C++L+SLP +I  +
Sbjct: 655 NWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELI 714

Query: 776 RSLRMMYPSGCS 787
            SL  +   GCS
Sbjct: 715 DSLEFLIVVGCS 726


>gi|334183667|ref|NP_001185325.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196312|gb|AEE34433.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1051

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 67/321 (20%)

Query: 65  LKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           LK+ P + ++  +L +L+L   +S+ E+PSSI     L+ LYLN C +LV LPSSI  L 
Sbjct: 684 LKELPDL-STATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLH 742

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI--RRP--TSSIFLMKNLRSLYFSG 179
            L+ L L+GC KLE +P  +  +ESL+ELD++   +  R P  +++I ++K LR    + 
Sbjct: 743 KLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLVLKRFPEISTNIKVLKLLR----TT 797

Query: 180 CNEPPAS-ASW----HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
             E P+S  SW     L L +N              +L G   +  LD+           
Sbjct: 798 IKEVPSSIKSWPRLRDLELSYN-------------QNLKGF--MHALDI----------- 831

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
                   +  +Y N      +P  +  +  L+ L L  CK+L SLPQ+P +L +++   
Sbjct: 832 --------ITTMYFNDIEMQEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVN 883

Query: 295 CSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF 354
           C SL  L  +    +     INC      L+ N  A  ++     +Q  +        V 
Sbjct: 884 CESLERLDCSFHNPKMSLGFINC------LKLNKEAKELI-----IQITTK-----CTVL 927

Query: 355 PGSQIPKWFMYQNE-GSSITV 374
           PG ++P +F ++ + GSS+ V
Sbjct: 928 PGREVPVYFTHRTKNGSSLRV 948



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 33/179 (18%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LYL+  TS+ E+PSSI  L  L+ LTL GC  L  LP  I+ L+ L  L+L+ C  
Sbjct: 719 NLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLV 777

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL------------ 112
           LK+FP+I  +++ L  L    T+I EVPSSI+  P L  L L+  +NL            
Sbjct: 778 LKRFPEISTNIKVLKLL---RTTIKEVPSSIKSWPRLRDLELSYNQNLKGFMHALDIITT 834

Query: 113 --------VRLPSSINGLKSLKTLNLSGCCK---LENVPDTLGKV-----ESLEELDVS 155
                     +P  +  +  L+TL L+GC K   L  +PD+L  +     ESLE LD S
Sbjct: 835 MYFNDIEMQEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCS 893



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 36/181 (19%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL  +I  L  L +LTLNGC  LE LP  I+ L+ L  L+L+     + FPEI+++
Sbjct: 729 TSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLVLKRFPEISTN 787

Query: 728 RDQLLEIHLEGTAIRGLPASIE--------LLSGNILSNLKDCKN--------------L 765
              L    L  T I+ +P+SI+         LS N   NLK   +              +
Sbjct: 788 IKVL---KLLRTTIKEVPSSIKSWPRLRDLELSYN--QNLKGFMHALDIITTMYFNDIEM 842

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTE--------TLGKVESLEVRLSSWNRPKMQND 817
           + +P  +  +  L+ +  +GC KL ++ +         +   ESLE    S++ PKM   
Sbjct: 843 QEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCSFHNPKMSLG 902

Query: 818 F 818
           F
Sbjct: 903 F 903


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 32/283 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L+ LYL    ++ +P ++  L  L  L L     LS+LP  +  L+ L +L+LS
Sbjct: 342 VGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNL-SSNQLSTLPEVVGQLQSLTSLDLS 400

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P++V  ++ L+ LYL    ++ +P ++  L  L  L L+    L  LP  + 
Sbjct: 401 -SNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLS-SNQLSTLPEVVG 458

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+SL +LNL    +L  +P+ +G+++SL  LD+S   +      +  +++L SL     
Sbjct: 459 QLQSLTSLNLR-SNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL----- 512

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                       L  N L          LP + G + SLT LDLS   L  + +P  +  
Sbjct: 513 -----------DLRSNQLS--------TLPEVVGQLQSLTSLDLSSNQL--STLPEVVGQ 551

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           L SL  LYL  N   TLP  I  L +L  L+L D  +L  LP+
Sbjct: 552 LQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSD-NQLSELPR 593



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 153/318 (48%), Gaps = 23/318 (7%)

Query: 14  GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
           G ++  +P  I  LT L  L L        +P  +  L+ LR+L LS  ++L   P++V 
Sbjct: 57  GNNLQTLPDEIGRLTELRSLFL-AYNQFEEIPEVVGRLRKLRSLNLS-SNQLSTLPEVVG 114

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            ++ L+ LYL    ++ +P  +  L  L  L L+    L  LP  + G +SL +LNL   
Sbjct: 115 QLQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLS-SNQLSTLPEVV-GQQSLTSLNLR-S 171

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASW 189
            +L  +P+ +G+++SL  LD+S   +      +  +++L SL  S  N+    P      
Sbjct: 172 NQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLS-FNQLSTLPEVVGQL 230

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                 NL   SS  ++  LP + G + SLT LDLS   L  + +P  +  L SL  LYL
Sbjct: 231 QSLTSLNL---SSNQLS-TLPEVVGQLQSLTSLDLSSNQL--STLPEVVGQLQSLTSLYL 284

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-----VRANGCSSLVTLFG 303
             N   TLP ++  L +L  L+L    +L +LP++   LQ      +R+N  S+L  + G
Sbjct: 285 RSNQLSTLPEAVGQLQSLTSLDLS-SNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVG 343

Query: 304 ALKLCRSKYTIINCIDSL 321
            L+   S Y   N + +L
Sbjct: 344 QLQSLTSLYLSSNQLSTL 361



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 21/330 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L+ LYL    ++ +P  +  L  L  L L     LS+LP  +   + L +L L 
Sbjct: 113 VGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDL-SSNQLSTLPEVVGQ-QSLTSLNLR 170

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P++V  ++ L+ L L    ++ +P  +  L  L  L L+    L  LP  + 
Sbjct: 171 -SNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLS-FNQLSTLPEVVG 228

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L+SL +LNLS   +L  +P+ +G+++SL  LD+S   +      +  +++L SLY    
Sbjct: 229 QLQSLTSLNLS-SNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSN 287

Query: 180 --CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSD 236
                P A          +L   SS  ++  LP + G + SLT L+L    L  + +P  
Sbjct: 288 QLSTLPEAVGQLQSLTSLDL---SSNQLS-TLPEVVGQLQSLTSLNLRSNQL--STLPEV 341

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-----VR 291
           +  L SL  LYL+ N   TLP ++  L +L  L L    +L +LP++   LQ      + 
Sbjct: 342 VGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLS-SNQLSTLPEVVGQLQSLTSLDLS 400

Query: 292 ANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
           +N  S+L  + G L+   S Y   N + +L
Sbjct: 401 SNQLSTLPEVVGQLQSLTSLYLRSNQLSTL 430



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 5/179 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L+ L L    ++ +P  +  L  L  L L+  + LS+LP  I  L+ L +L+LS
Sbjct: 526 VGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQ-LSTLPEVIGQLQSLTSLDLS 584

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L + P+ +  ++ L  L+L G  + ++P+ +  L  LE L L    +L+      N
Sbjct: 585 D-NQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSA-SLIFDSYYHN 642

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            L++          KL ++ D L  + SLE LD+S   + R  S I  ++ L+ +   G
Sbjct: 643 VLRAFGASKQGN--KLTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSLEKLKQIDLRG 699


>gi|240256307|ref|NP_197336.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005159|gb|AED92542.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1245

 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 207/524 (39%), Gaps = 120/524 (22%)

Query: 16   SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISS-------------LKCLRT-LELSG 61
            S  E+P SI  LT L++L L  C  L +LP +I +             L+   T + L  
Sbjct: 728  SFEELPKSIGKLTNLKVLELMRCYKLVTLPNSIKTPKLPVLSMSECEDLQAFPTYINLED 787

Query: 62   CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR------- 114
            C++LK FP+I  ++++L    L  T+I  VPSSI     L  L ++EC+NL         
Sbjct: 788  CTQLKMFPEISTNVKELD---LRNTAIENVPSSICSWSCLYRLDMSECRNLKEFPNVPVS 844

Query: 115  -------------LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
                         +PS I  L  L+TL + GC +L  +   + K+++LE+L++    +  
Sbjct: 845  IVELDLSKTEIEEVPSWIENLLLLRTLTMVGCKRLNIISPNISKLKNLEDLELFTDGVSG 904

Query: 162  PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL 221
              +S +       + FS  ++      W L   F         V  +LP    +C L K+
Sbjct: 905  DAASFYAF-----VEFSDRHD------WTLESDFQ--------VHYILP----IC-LPKM 940

Query: 222  DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
             +S                     L     +F T+P  I+ L  L EL++  C+ L SLP
Sbjct: 941  AIS---------------------LRFWSYDFETIPDCINCLPGLSELDVSGCRNLVSLP 979

Query: 282  QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ 341
            Q+P +L  + AN C SL  + G+ +         NCI+  +  RK  L  +   EY    
Sbjct: 980  QLPGSLLSLDANNCESLERINGSFQNPEICLNFANCINLNQEARK--LIQTSACEY---- 1033

Query: 342  AVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV-----TRPSYLYNVNKVVGFAICCVFQ 396
                       + PG+++P  F  Q+   S+T+     T PS L        +  C +  
Sbjct: 1034 ----------AILPGAEVPAHFTDQDTSGSLTINITTKTLPSRLR-------YKACILL- 1075

Query: 397  VPKHSTGTYLFHSYPAHE-LECSMDGSGEGHYIYFRGKFGHVVSDHLWLL---FLPRHGH 452
                S G            +  S   +G+ + +          +DHL++    F      
Sbjct: 1076 ----SKGNINLEDEDEDSFMSVSCHVTGKQNILILPSPVLRGYTDHLYIFDYSFSLHEDF 1131

Query: 453  NWQFESNLIRLSFRSI-SDPTWKVKRCGFHPIYMHEVEEFDETT 495
                E+    L F  I    +W VK CG H      + E +E T
Sbjct: 1132 PEAKEATFSELMFDFIVHTKSWNVKSCGVHLFEEKNLPEKNEVT 1175



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 38/253 (15%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEV 91
           L ++G  N   L   I  LK L+ ++LS    LK+ P + ++  +L +L L   S + E+
Sbjct: 627 LVMRG-NNFEKLWEKILPLKSLKRMDLSHSKDLKEIPDL-SNATNLEELDLSSCSGLLEL 684

Query: 92  PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
             SI     L+ L L  C  L +LPSSI    +L+ L+L  C   E +P ++GK+ +L+ 
Sbjct: 685 TDSIGKATNLKRLKLACCSLLKKLPSSIGDATNLQVLDLFHCESFEELPKSIGKLTNLKV 744

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS 211
           L+              LM+  + +      + P        LP  +L  S C      P 
Sbjct: 745 LE--------------LMRCYKLVTLPNSIKTPK-------LP--VLSMSECEDLQAFP- 780

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
                  T ++L DC   +  +  +I    ++KEL L       +P+SI     L  L++
Sbjct: 781 -------TYINLEDC--TQLKMFPEIST--NVKELDLRNTAIENVPSSICSWSCLYRLDM 829

Query: 272 EDCKRLQSLPQIP 284
            +C+ L+  P +P
Sbjct: 830 SECRNLKEFPNVP 842



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 100/237 (42%), Gaps = 64/237 (27%)

Query: 91  VPSSIELLPG-LELLYLNEC---------------------KNLVRLPSSINGLKSLKTL 128
           +P  +  LPG L +L+ N C                      N  +L   I  LKSLK +
Sbjct: 591 LPRGLNCLPGKLRVLHWNYCPLRLWPSKFSANFLVELVMRGNNFEKLWEKILPLKSLKRM 650

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASA 187
           +LS    L+ +PD L    +LEELD+S  + +   T SI    NL+ L  + C+      
Sbjct: 651 DLSHSKDLKEIPD-LSNATNLEELDLSSCSGLLELTDSIGKATNLKRLKLACCS------ 703

Query: 188 SWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                    LL K        LPS  G   +L  LDL  C   E  +P  I  L +LK L
Sbjct: 704 ---------LLKK--------LPSSIGDATNLQVLDLFHCESFEE-LPKSIGKLTNLKVL 745

Query: 247 YLNR-NNFVTLPASISG----LLNLEELE----------LEDCKRLQSLPQIPPNLQ 288
            L R    VTLP SI      +L++ E E          LEDC +L+  P+I  N++
Sbjct: 746 ELMRCYKLVTLPNSIKTPKLPVLSMSECEDLQAFPTYINLEDCTQLKMFPEISTNVK 802



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 65/158 (41%), Gaps = 28/158 (17%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL--SGCSK 64
           + +L L  T I EVPS IE L  L  LT+ GCK L+ +   IS LK L  LEL   G S 
Sbjct: 845 IVELDLSKTEIEEVPSWIENLLLLRTLTMVGCKRLNIISPNISKLKNLEDLELFTDGVSG 904

Query: 65  LKKFPQIVASMEDLSKLYLDGT-----------------------SIAEVPSSIELLPGL 101
                       D     L+                             +P  I  LPGL
Sbjct: 905 DAASFYAFVEFSDRHDWTLESDFQVHYILPICLPKMAISLRFWSYDFETIPDCINCLPGL 964

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
             L ++ C+NLV LP  + G  SL +L+ + C  LE +
Sbjct: 965 SELDVSGCRNLVSLP-QLPG--SLLSLDANNCESLERI 999



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 32/138 (23%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+++ C++L+  P  I         NL   ++ + FPEI+++   + E+ L  TAI  +P
Sbjct: 768 LSMSECEDLQAFPTYI---------NLEDCTQLKMFPEISTN---VKELDLRNTAIENVP 815

Query: 746 ASIELLSGNILSNLKDCKNLK--------------------SLPSTINGLRSLRMMYPSG 785
           +SI   S     ++ +C+NLK                     +PS I  L  LR +   G
Sbjct: 816 SSICSWSCLYRLDMSECRNLKEFPNVPVSIVELDLSKTEIEEVPSWIENLLLLRTLTMVG 875

Query: 786 CSKLKNVTETLGKVESLE 803
           C +L  ++  + K+++LE
Sbjct: 876 CKRLNIISPNISKLKNLE 893



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 15/159 (9%)

Query: 656 EFPD----IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP+    IV++    T+I E+   IE L  L  LT+ GCK L  +   IS LK L  L 
Sbjct: 837 EFPNVPVSIVELDLSKTEIEEVPSWIENLLLLRTLTMVGCKRLNIISPNISKLKNLEDLE 896

Query: 712 L--SGLS----KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
           L   G+S     F  F E +   D  LE   +   I  LP  +  ++ ++     D    
Sbjct: 897 LFTDGVSGDAASFYAFVEFSDRHDWTLESDFQVHYI--LPICLPKMAISLRFWSYD---F 951

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           +++P  IN L  L  +  SGC  L ++ +  G + SL+ 
Sbjct: 952 ETIPDCINCLPGLSELDVSGCRNLVSLPQLPGSLLSLDA 990



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 3/123 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L + G  N E+L   I  LK L  ++LS     +E P+++++ + L E+ L   + +
Sbjct: 624 LVELVMRG-NNFEKLWEKILPLKSLKRMDLSHSKDLKEIPDLSNATN-LEELDLSSCSGL 681

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             L  SI   +      L  C  LK LPS+I    +L+++    C   + + +++GK+ +
Sbjct: 682 LELTDSIGKATNLKRLKLACCSLLKKLPSSIGDATNLQVLDLFHCESFEELPKSIGKLTN 741

Query: 802 LEV 804
           L+V
Sbjct: 742 LKV 744


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 18/314 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L DL +    +  +P  I  L  L+ L L     L++LP  I  L+ L+ L + 
Sbjct: 173 IGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRL-AYNQLTTLPKEIGRLENLQDLNVF 231

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ + ++++L  L L+   +  +P  I  L  LE LYL   + L  LP  I 
Sbjct: 232 N-NQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQ-LATLPKEIG 289

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY--FS 178
            L+ L+ L L+   +L+++P  +GK+++L+EL +    +      I  + NL+ L+  ++
Sbjct: 290 KLQRLEWLGLANN-QLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYN 348

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
           G    P        LP+  L  +       LP   G +  L  L+L +  L  A +P +I
Sbjct: 349 GFTTLPQEIGTLHRLPWLNLEHNQLTT---LPQEIGRLERLEWLNLYNNRL--ATLPKEI 403

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-----VRA 292
             L  L+ LYL  N   TLP  I  L NLE+L+LE   +L +LP+    LQ      ++ 
Sbjct: 404 GTLRKLQHLYLANNQLATLPKEIGQLQNLEDLDLE-YNQLATLPEAIGTLQRLEWLSLKN 462

Query: 293 NGCSSLVTLFGALK 306
           N  ++L    G L+
Sbjct: 463 NQLTTLPEEIGTLQ 476



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 148/333 (44%), Gaps = 58/333 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  LYL+   +T +P  IE L  L+ L L   + L++LP  I  L+ L  L L 
Sbjct: 58  IGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQ-LATLPKEIGKLQRLERLYLG 116

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--NECK-------- 110
           G ++L   PQ + +++DL +L L    +  +P  I  L  LE L L  N+ +        
Sbjct: 117 G-NQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGT 175

Query: 111 ------------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
                        L+ LP  I  L++LK L L+   +L  +P  +G++E+L++L+V    
Sbjct: 176 LQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLA-YNQLTTLPKEIGRLENLQDLNVFNNQ 234

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS- 217
           +      I  ++NL+SL                               + LP   G    
Sbjct: 235 LITLPQEIGTLQNLQSLNLENNR------------------------LITLPKEIGTLQK 270

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L  L L++  L  A +P +I  L  L+ L L  N   +LP  I  L NL+EL LE+  RL
Sbjct: 271 LEWLYLTNNQL--ATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILEN-NRL 327

Query: 278 QSLPQ---IPPNLQ--FVRANGCSSLVTLFGAL 305
           +S P+      NLQ   +  NG ++L    G L
Sbjct: 328 ESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTL 360



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 127/287 (44%), Gaps = 33/287 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L  L L+   +  +P  I  L  LE L L   + L++LP  I  L+ L  L L+
Sbjct: 242 IGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQ-LATLPKEIGKLQRLEWLGLA 300

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  PQ +  +++L +L L+   +   P  I  L  L+ L+L E      LP  I 
Sbjct: 301 N-NQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHL-EYNGFTTLPQEIG 358

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L  L  LNL    +L  +P  +G++E LE L++    +      I  ++ L+ LY +  
Sbjct: 359 TLHRLPWLNLEHN-QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANN 417

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVAL-----------------MLPSLTGVC 216
                P           L L +N L  ++ P A+                  LP   G  
Sbjct: 418 QLATLPKEIGQLQNLEDLDLEYNQL--ATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTL 475

Query: 217 S-LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG 262
             + KL+L++  L    +P +I  L +LK+L L+ N F T P  I G
Sbjct: 476 QKIVKLNLANNQL--RTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVG 520



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           ++L   PQ +  +++L  LYL+   +  +P  IE L  L+ LYL+E + L  LP  I  L
Sbjct: 49  NQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQ-LATLPKEIGKL 107

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--C 180
           + L+ L L G  +L  +P  +G ++ LEEL +    +      I  +++L  L  +    
Sbjct: 108 QRLERLYLGG-NQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQL 166

Query: 181 NEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDID 238
              P       HL   N+         + LP   G   +L  L L+   L    +P +I 
Sbjct: 167 RTLPKEIGTLQHLQDLNVFNNQ----LITLPQEIGTLQNLKYLRLAYNQL--TTLPKEIG 220

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRAN 293
            L +L++L +  N  +TLP  I  L NL+ L LE+  RL +LP+    LQ     ++  N
Sbjct: 221 RLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLEN-NRLITLPKEIGTLQKLEWLYLTNN 279

Query: 294 GCSSLVTLFGALK 306
             ++L    G L+
Sbjct: 280 QLATLPKEIGKLQ 292


>gi|168043922|ref|XP_001774432.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674284|gb|EDQ60795.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 394

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 30/308 (9%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + ++  L+ L L G +S+T +P+ +  LT L  L LK C NL+SLP  + +L  L +L+L
Sbjct: 93  LGNLTSLTSLNLSGNSSLTSLPNEMGNLTSLTSLNLKRCSNLTSLPNELGNLASLTSLKL 152

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S CS LK  P  ++++  L  L L G   +  +P+ +  L  L  L L+ C NL  LP+ 
Sbjct: 153 SRCSSLKSLPIELSNLTSLPSLSLSGCWKLTSLPNELGNLTSLTSLNLSGCSNLTSLPNE 212

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           +  L SL +L L  C  L ++P+  G + SL  L++ G   +  TS   ++ NL SL   
Sbjct: 213 LGNLTSLTSLKLRRCSNLTSLPNEFGNLASLTSLNLDG--WKNLTSLPKVLVNLTSLTS- 269

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                              L  S C     LP+ L  + SLT L+LS C     ++P+++
Sbjct: 270 -------------------LNLSRCSSLTSLPNELGNLASLTSLNLSGCW-RLRSLPNEL 309

Query: 238 DNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---N 293
            NL SL  L++++     +LP  +  L +L  L L +C  L SLP    NL  + +   +
Sbjct: 310 GNLTSLTSLHISKCWELTSLPNELGNLTSLILLNLSECSNLTSLPNELCNLTSLISLDLS 369

Query: 294 GCSSLVTL 301
           GCS+L ++
Sbjct: 370 GCSNLTSM 377



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 89/155 (57%), Gaps = 2/155 (1%)

Query: 2   ASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            ++  L+ L LDG  ++T +P  +  LT L  L L  C +L+SLP  + +L  L +L LS
Sbjct: 238 GNLASLTSLNLDGWKNLTSLPKVLVNLTSLTSLNLSRCSSLTSLPNELGNLASLTSLNLS 297

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           GC +L+  P  + ++  L+ L++     +  +P+ +  L  L LL L+EC NL  LP+ +
Sbjct: 298 GCWRLRSLPNELGNLTSLTSLHISKCWELTSLPNELGNLTSLILLNLSECSNLTSLPNEL 357

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
             L SL +L+LSGC  L ++P+ L  + SL  L++
Sbjct: 358 CNLTSLISLDLSGCSNLTSMPNELHNITSLTSLNI 392



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 141/285 (49%), Gaps = 15/285 (5%)

Query: 28  TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT- 86
           T L  L +  C  L SLP  + +L  L +L L  C KL   P+ + ++  L+ L L G  
Sbjct: 1   TSLTSLHISQCHELRSLPNELGNLVSLTSLNLVNCWKLTSLPKELVNLTSLTSLNLSGFW 60

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
            +  +P+ +  L  L  L ++ C  L  LP+ +  L SL +LNLSG   L ++P+ +G +
Sbjct: 61  EVTLLPNELGNLTSLTSLEISGCSKLTSLPNKLGNLTSLTSLNLSGNSSLTSLPNEMGNL 120

Query: 147 ESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKS 201
            SL  L++   + +    + +  + +L SL  S C+     P   ++       +L G  
Sbjct: 121 TSLTSLNLKRCSNLTSLPNELGNLASLTSLKLSRCSSLKSLPIELSNLTSLPSLSLSG-- 178

Query: 202 SCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPAS 259
            C     LP+ L  + SLT L+LS C     ++P+++ NL SL  L L R +N  +LP  
Sbjct: 179 -CWKLTSLPNELGNLTSLTSLNLSGCS-NLTSLPNELGNLTSLTSLKLRRCSNLTSLPNE 236

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
              L +L  L L+  K L SLP++  NL  + +   + CSSL +L
Sbjct: 237 FGNLASLTSLNLDGWKNLTSLPKVLVNLTSLTSLNLSRCSSLTSL 281



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 16/178 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQVLS---DG-TDIRELSLAIELLFGLVQ 685
           P E GN           CS L    +EF ++  + S   DG  ++  L   +  L  L  
Sbjct: 210 PNELGNLTSLTSLKLRRCSNLTSLPNEFGNLASLTSLNLDGWKNLTSLPKVLVNLTSLTS 269

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L L+ C +L  LP  +  L  L++LNLSG  + R  P    +   L  +H+     +  L
Sbjct: 270 LNLSRCSSLTSLPNELGNLASLTSLNLSGCWRLRSLPNELGNLTSLTSLHISKCWELTSL 329

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           P  +  L+  IL NL +C NL SLP+ +  L SL  +  SGCS L ++   L  + SL
Sbjct: 330 PNELGNLTSLILLNLSECSNLTSLPNELCNLTSLISLDLSGCSNLTSMPNELHNITSL 387



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L  L L+G   +  LP  +  L  L++L +SG SK    P    +   L  ++L G 
Sbjct: 48  LTSLTSLNLSGFWEVTLLPNELGNLTSLTSLEISGCSKLTSLPNKLGNLTSLTSLNLSGN 107

Query: 739 TAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           +++  LP  +    GN+ S    NLK C NL SLP+ +  L SL  +  S CS LK++
Sbjct: 108 SSLTSLPNEM----GNLTSLTSLNLKRCSNLTSLPNELGNLASLTSLKLSRCSSLKSL 161



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 79/182 (43%), Gaps = 24/182 (13%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CS L    +E  ++  +    LS  + ++ L + +  L  L  
Sbjct: 114 PNEMGNLTSLTSLNLKRCSNLTSLPNELGNLASLTSLKLSRCSSLKSLPIELSNLTSLPS 173

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGL 744
           L+L+GC  L  LP  +  L  L++LNLSG S     P    +   L  + L   + +  L
Sbjct: 174 LSLSGCWKLTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNLTSLTSLKLRRCSNLTSL 233

Query: 745 PASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           P       GN+ S    NL   KNL SLP  +  L SL  +  S CS L ++   LG + 
Sbjct: 234 PNEF----GNLASLTSLNLDGWKNLTSLPKVLVNLTSLTSLNLSRCSSLTSLPNELGNLA 289

Query: 801 SL 802
           SL
Sbjct: 290 SL 291



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 31/230 (13%)

Query: 601 MVSQAKAISQQGQFVKMISVDSGCMSCYKKWGRQTVRRQSPQEPGN-----------CSR 649
           +V+  K  S   + V + S+ S  +S +  W    +    P E GN           CS+
Sbjct: 32  LVNCWKLTSLPKELVNLTSLTSLNLSGF--WEVTLL----PNELGNLTSLTSLEISGCSK 85

Query: 650 LWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           L    ++  ++  +    LS  + +  L   +  L  L  L L  C NL  LP  +  L 
Sbjct: 86  LTSLPNKLGNLTSLTSLNLSGNSSLTSLPNEMGNLTSLTSLNLKRCSNLTSLPNELGNLA 145

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILS----NLK 760
            L++L LS  S  +  P   S+   L  + L G   +  LP  +    GN+ S    NL 
Sbjct: 146 SLTSLKLSRCSSLKSLPIELSNLTSLPSLSLSGCWKLTSLPNEL----GNLTSLTSLNLS 201

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSSW 809
            C NL SLP+ +  L SL  +    CS L ++    G + SL  + L  W
Sbjct: 202 GCSNLTSLPNELGNLTSLTSLKLRRCSNLTSLPNEFGNLASLTSLNLDGW 251


>gi|168005341|ref|XP_001755369.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693497|gb|EDQ79849.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 555

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 29/293 (9%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L    +KGC  L+SLP  + +L  L T ++S CS L   P  + +
Sbjct: 133 SSLTSLPNELGNLTSLTTFIIKGCSGLTSLPNELRNLTSLTTFDVSRCSSLTSLPNELGN 192

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+   + G +S+  +P+ +  L  L    ++EC +L  LP+ ++ L SL T ++S C
Sbjct: 193 LTSLTTFIIRGCSSLTSLPNELGNLISLTKFDISECSSLTSLPNELDNLTSLTTFDISEC 252

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             L ++P+ LG + SL   D+S       TS    + NL SL                  
Sbjct: 253 SSLTSLPNELGNLTSLTTFDIS--ECSSLTSLPNELGNLTSL------------------ 292

Query: 194 PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN- 251
              +     C     LP+ L  + SLTK D+S+C     ++ +++ NL SL   ++ R  
Sbjct: 293 --TIFFIRRCSSLTSLPNELGNLTSLTKFDISECS-RLTSLSNELGNLTSLTTFFIRRCL 349

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
           +  +LP  +  L++L   ++  C  L SLP    NL  +      GCS L  L
Sbjct: 350 SLTSLPNELGNLISLTYFDVSWCSSLISLPNKLSNLTSLTTFIVKGCSGLTLL 402



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 142/295 (48%), Gaps = 33/295 (11%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+    LT L    ++GC +L+SLP  + +L  L   ++S CS L   P  + +
Sbjct: 85  SSLTSLPNEFGNLTSLTTFIIRGCSSLTSLPNELGNLISLTYFDVSWCSSLTSLPNELGN 144

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+   + G S +  +P+ +  L  L    ++ C +L  LP+ +  L SL T  + GC
Sbjct: 145 LTSLTTFIIKGCSGLTSLPNELRNLTSLTTFDVSRCSSLTSLPNELGNLTSLTTFIIRGC 204

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             L ++P+ LG + SL + D+S       TS    + NL SL                  
Sbjct: 205 SSLTSLPNELGNLISLTKFDIS--ECSSLTSLPNELDNLTSLT----------------- 245

Query: 194 PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-N 251
            F++   S C     LP+ L  + SLT  D+S+C     ++P+++ NL SL   ++ R +
Sbjct: 246 TFDI---SECSSLTSLPNELGNLTSLTTFDISECS-SLTSLPNELGNLTSLTIFFIRRCS 301

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTL 301
           +  +LP  +  L +L + ++ +C RL SL     NL      F+R   C SL +L
Sbjct: 302 SLTSLPNELGNLTSLTKFDISECSRLTSLSNELGNLTSLTTFFIRR--CLSLTSL 354



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 144/282 (51%), Gaps = 12/282 (4%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L +  ++ C +L+SLP  + +L  L   ++S CS+L      + +
Sbjct: 277 SSLTSLPNELGNLTSLTIFFIRRCSSLTSLPNELGNLTSLTKFDISECSRLTSLSNELGN 336

Query: 75  MEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+  ++    S+  +P+ +  L  L    ++ C +L+ LP+ ++ L SL T  + GC
Sbjct: 337 LTSLTTFFIRRCLSLTSLPNELGNLISLTYFDVSWCSSLISLPNKLSNLTSLTTFIVKGC 396

Query: 134 CKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASAS 188
             L  +P+ LG + SL   D+S  +++    + +  + +L +    GC+     P    +
Sbjct: 397 SGLTLLPNELGNLTSLTTFDISRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGN 456

Query: 189 WHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                 F++   S C     LP+ L  + SLTK D+S+C     ++P+++ NL SL   +
Sbjct: 457 LTSLTKFDI---SECSSLTSLPNELGNLTSLTKFDISECS-RLTSLPNELGNLTSLTTFF 512

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           + R ++  +LP  +  L +L   ++ +C RL SLP    NL+
Sbjct: 513 IRRCSSLTSLPNELGNLTSLTTFDICECTRLTSLPNKFGNLK 554



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 147/312 (47%), Gaps = 43/312 (13%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLD-- 84
           +T L++L LK CK L SLP +I SL  L+   +SGCS L   P  + ++  L+  Y D  
Sbjct: 1   MTSLKILNLKDCKQLHSLPTSIGSLLYLKNFNISGCSNLTSLPNELGNLISLT--YFDVS 58

Query: 85  -GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
             +S+  +P+ +  L  L    +  C +L  LP+    L SL T  + GC  L ++P+ L
Sbjct: 59  WCSSLTTLPNELGNLRSLITFDIRICSSLTSLPNEFGNLTSLTTFIIRGCSSLTSLPNEL 118

Query: 144 GKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGC-------NE----------PPA 185
           G + SL   DVS  +++    + +  + +L +    GC       NE            +
Sbjct: 119 GNLISLTYFDVSWCSSLTSLPNELGNLTSLTTFIIKGCSGLTSLPNELRNLTSLTTFDVS 178

Query: 186 SASWHLHLPFNLLGKSS---------CPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPS 235
             S    LP N LG  +         C     LP+ L  + SLTK D+S+C     ++P+
Sbjct: 179 RCSSLTSLP-NELGNLTSLTTFIIRGCSSLTSLPNELGNLISLTKFDISECS-SLTSLPN 236

Query: 236 DIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----F 289
           ++DNL SL    ++  ++  +LP  +  L +L   ++ +C  L SLP    NL      F
Sbjct: 237 ELDNLTSLTTFDISECSSLTSLPNELGNLTSLTTFDISECSSLTSLPNELGNLTSLTIFF 296

Query: 290 VRANGCSSLVTL 301
           +R   CSSL +L
Sbjct: 297 IRR--CSSLTSL 306



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 31/306 (10%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ ++ LT L    +  C +L+SLP  + +L  L T ++S CS L   P  + +
Sbjct: 229 SSLTSLPNELDNLTSLTTFDISECSSLTSLPNELGNLTSLTTFDISECSSLTSLPNELGN 288

Query: 75  MEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+  ++   +S+  +P+ +  L  L    ++EC  L  L + +  L SL T  +  C
Sbjct: 289 LTSLTIFFIRRCSSLTSLPNELGNLTSLTKFDISECSRLTSLSNELGNLTSLTTFFIRRC 348

Query: 134 CKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             L ++P+ LG + SL   DVS   + I  P + +  + +L +    GC+         L
Sbjct: 349 LSLTSLPNELGNLISLTYFDVSWCSSLISLP-NKLSNLTSLTTFIVKGCS--------GL 399

Query: 192 HLPFNLLGK---------SSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
            L  N LG          S C     LP+ L  + SLT   +  C     ++P+++ NL 
Sbjct: 400 TLLPNELGNLTSLTTFDISRCSSLTSLPNELGNLTSLTTFIIRGCS-SLTSLPNELGNLT 458

Query: 242 SLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGC 295
           SL +  ++  ++  +LP  +  L +L + ++ +C RL SLP    NL      F+R   C
Sbjct: 459 SLTKFDISECSSLTSLPNELGNLTSLTKFDISECSRLTSLPNELGNLTSLTTFFIRR--C 516

Query: 296 SSLVTL 301
           SSL +L
Sbjct: 517 SSLTSL 522



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 73/135 (54%), Gaps = 1/135 (0%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L    ++GC +L+SLP  + +L  L   ++S CS L   P  + +
Sbjct: 421 SSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLTSLTKFDISECSSLTSLPNELGN 480

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+K  +   S +  +P+ +  L  L   ++  C +L  LP+ +  L SL T ++  C
Sbjct: 481 LTSLTKFDISECSRLTSLPNELGNLTSLTTFFIRRCSSLTSLPNELGNLTSLTTFDICEC 540

Query: 134 CKLENVPDTLGKVES 148
            +L ++P+  G ++S
Sbjct: 541 TRLTSLPNKFGNLKS 555



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 2/156 (1%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++++  L+   + G S +T +P+ +  LT L    +  C +L+SLP  + +L  L T  +
Sbjct: 382 LSNLTSLTTFIVKGCSGLTLLPNELGNLTSLTTFDISRCSSLTSLPNELGNLTSLTTFII 441

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            GCS L   P  + ++  L+K  + + +S+  +P+ +  L  L    ++EC  L  LP+ 
Sbjct: 442 RGCSSLTSLPNELGNLTSLTKFDISECSSLTSLPNELGNLTSLTKFDISECSRLTSLPNE 501

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           +  L SL T  +  C  L ++P+ LG + SL   D+
Sbjct: 502 LGNLTSLTTFFIRRCSSLTSLPNELGNLTSLTTFDI 537



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE-GTAIRGL 744
           L L  CK L  LP +I +L YL   N+SG S     P    +   L    +   +++  L
Sbjct: 7   LNLKDCKQLHSLPTSIGSLLYLKNFNISGCSNLTSLPNELGNLISLTYFDVSWCSSLTTL 66

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P  +  L   I  +++ C +L SLP+    L SL      GCS L ++   LG + SL  
Sbjct: 67  PNELGNLRSLITFDIRICSSLTSLPNEFGNLTSLTTFIIRGCSSLTSLPNELGNLISLTY 126

Query: 805 RLSSW 809
              SW
Sbjct: 127 FDVSW 131



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L    + GC  L  LP  +  L  L+T ++S  S     P    +   L    + G 
Sbjct: 385 LTSLTTFIVKGCSGLTLLPNELGNLTSLTTFDISRCSSLTSLPNELGNLTSLTTFIIRGC 444

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+     ++ +C +L SLP+ +  L SL     S CS+L ++   LG 
Sbjct: 445 SSLTSLPNELGNLTSLTKFDISECSSLTSLPNELGNLTSLTKFDISECSRLTSLPNELGN 504

Query: 799 VESLEV 804
           + SL  
Sbjct: 505 LTSLTT 510



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L +  ++ C +L  LP  +  L  L+T ++S  S     P    +   L    + E 
Sbjct: 217 LISLTKFDISECSSLTSLPNELDNLTSLTTFDISECSSLTSLPNELGNLTSLTTFDISEC 276

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+   +  ++ C +L SLP+ +  L SL     S CS+L +++  LG 
Sbjct: 277 SSLTSLPNELGNLTSLTIFFIRRCSSLTSLPNELGNLTSLTKFDISECSRLTSLSNELGN 336

Query: 799 VESLEV 804
           + SL  
Sbjct: 337 LTSLTT 342



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 16/180 (8%)

Query: 641 PQEPGN-----------CSRLWEEADEFPDIVQ----VLSDGTDIRELSLAIELLFGLVQ 685
           P E GN           CS L    +E  ++      ++   + +  L   +  L  L  
Sbjct: 115 PNELGNLISLTYFDVSWCSSLTSLPNELGNLTSLTTFIIKGCSGLTSLPNELRNLTSLTT 174

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGL 744
             ++ C +L  LP  +  L  L+T  + G S     P    +   L +  + E +++  L
Sbjct: 175 FDVSRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLISLTKFDISECSSLTSL 234

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           P  ++ L+     ++ +C +L SLP+ +  L SL     S CS L ++   LG + SL +
Sbjct: 235 PNELDNLTSLTTFDISECSSLTSLPNELGNLTSLTTFDISECSSLTSLPNELGNLTSLTI 294



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L    + GC +L  LP  +  L  L+  ++S  S     P    +   L    + E 
Sbjct: 193 LTSLTTFIIRGCSSLTSLPNELGNLISLTKFDISECSSLTSLPNELDNLTSLTTFDISEC 252

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+     ++ +C +L SLP+ +  L SL + +   CS L ++   LG 
Sbjct: 253 SSLTSLPNELGNLTSLTTFDISECSSLTSLPNELGNLTSLTIFFIRRCSSLTSLPNELGN 312

Query: 799 VESL 802
           + SL
Sbjct: 313 LTSL 316



 Score = 39.7 bits (91), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L    ++ C +L  LP  +  L  L+T  + G S     P    +   L +  + E 
Sbjct: 409 LTSLTTFDISRCSSLTSLPNELGNLTSLTTFIIRGCSSLTSLPNELGNLTSLTKFDISEC 468

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+     ++ +C  L SLP+ +  L SL   +   CS L ++   LG 
Sbjct: 469 SSLTSLPNELGNLTSLTKFDISECSRLTSLPNELGNLTSLTTFFIRRCSSLTSLPNELGN 528

Query: 799 VESLEV 804
           + SL  
Sbjct: 529 LTSLTT 534


>gi|22330441|ref|NP_176760.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6227009|gb|AAF06045.1|AC009513_1 Strong similarity to gb|AF098963 disease resistance protein
           RPP1-WsB from Arabidopsis thaliana and contains 2
           PF|00931 NB-ARC domains and 5 PF|00560 Leucine Rich
           Repeats [Arabidopsis thaliana]
 gi|332196311|gb|AEE34432.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1036

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 67/321 (20%)

Query: 65  LKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           LK+ P + ++  +L +L+L   +S+ E+PSSI     L+ LYLN C +LV LPSSI  L 
Sbjct: 669 LKELPDL-STATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCTSLVELPSSIGNLH 727

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI--RRP--TSSIFLMKNLRSLYFSG 179
            L+ L L+GC KLE +P  +  +ESL+ELD++   +  R P  +++I ++K LR    + 
Sbjct: 728 KLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLVLKRFPEISTNIKVLKLLR----TT 782

Query: 180 CNEPPAS-ASW----HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
             E P+S  SW     L L +N              +L G   +  LD+           
Sbjct: 783 IKEVPSSIKSWPRLRDLELSYN-------------QNLKGF--MHALDI----------- 816

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANG 294
                   +  +Y N      +P  +  +  L+ L L  CK+L SLPQ+P +L +++   
Sbjct: 817 --------ITTMYFNDIEMQEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVN 868

Query: 295 CSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF 354
           C SL  L  +    +     INC      L+ N  A  ++     +Q  +        V 
Sbjct: 869 CESLERLDCSFHNPKMSLGFINC------LKLNKEAKELI-----IQITTK-----CTVL 912

Query: 355 PGSQIPKWFMYQNE-GSSITV 374
           PG ++P +F ++ + GSS+ V
Sbjct: 913 PGREVPVYFTHRTKNGSSLRV 933



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 33/179 (18%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  LYL+  TS+ E+PSSI  L  L+ LTL GC  L  LP  I+ L+ L  L+L+ C  
Sbjct: 704 NLQKLYLNMCTSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLV 762

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNL------------ 112
           LK+FP+I  +++ L  L    T+I EVPSSI+  P L  L L+  +NL            
Sbjct: 763 LKRFPEISTNIKVLKLL---RTTIKEVPSSIKSWPRLRDLELSYNQNLKGFMHALDIITT 819

Query: 113 --------VRLPSSINGLKSLKTLNLSGCCK---LENVPDTLGKV-----ESLEELDVS 155
                     +P  +  +  L+TL L+GC K   L  +PD+L  +     ESLE LD S
Sbjct: 820 MYFNDIEMQEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCS 878



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 36/181 (19%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T + EL  +I  L  L +LTLNGC  LE LP  I+ L+ L  L+L+     + FPEI+++
Sbjct: 714 TSLVELPSSIGNLHKLQKLTLNGCSKLEVLPANIN-LESLDELDLTDCLVLKRFPEISTN 772

Query: 728 RDQLLEIHLEGTAIRGLPASIEL--------LSGNILSNLKDCKN--------------L 765
              L    L  T I+ +P+SI+         LS N   NLK   +              +
Sbjct: 773 IKVL---KLLRTTIKEVPSSIKSWPRLRDLELSYN--QNLKGFMHALDIITTMYFNDIEM 827

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTE--------TLGKVESLEVRLSSWNRPKMQND 817
           + +P  +  +  L+ +  +GC KL ++ +         +   ESLE    S++ PKM   
Sbjct: 828 QEIPLWVKKISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCSFHNPKMSLG 887

Query: 818 F 818
           F
Sbjct: 888 F 888


>gi|168061904|ref|XP_001782925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665597|gb|EDQ52276.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 517

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 158/302 (52%), Gaps = 23/302 (7%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ ++ LT L +L +  C +L+SLP  + +L  L  L++S CS L   P  + +
Sbjct: 31  SSLTSLPNELDNLTSLTILNISSCSSLTSLPNELGNLTSLIELDISKCSCLTLLPIELGN 90

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+K  +   S +  +P+ +  L  L  L ++ C  L  LP+ +  L SL TLN+S C
Sbjct: 91  LISLTKFDISSCSYLISLPNELGNLTSLTKLDISSCSRLTSLPNELGNLTSLTTLNISLC 150

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
             L ++P+ LG + SL ELD+S  +  R T     + NL SL      +   S+  HL L
Sbjct: 151 SSLTSLPNELGNLTSLIELDISKCS--RLTLLPIELGNLISLT-----KFDISSCLHLIL 203

Query: 194 PFNLLGK---------SSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
             N LG          S C     LP+ L  + SLT L++S C     ++P+++ NL SL
Sbjct: 204 LPNELGNLISLIELDISLCSSLTSLPNELGNLTSLTTLNISQCS-HLTSLPNELGNLTSL 262

Query: 244 KELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLV 299
            +L ++  ++  +LP  +S L++L +L++  C  L SLP    N   L  +  + CS LV
Sbjct: 263 TKLDISSCSSLTSLPNELSNLISLTKLDISWCSSLASLPIELGNLTSLTTLNISWCSDLV 322

Query: 300 TL 301
           +L
Sbjct: 323 SL 324



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 151/297 (50%), Gaps = 13/297 (4%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L  L +  C +L+SLP  + +L  L  L++S CS L   P  +++
Sbjct: 223 SSLTSLPNELGNLTSLTTLNISQCSHLTSLPNELGNLTSLTKLDISSCSSLTSLPNELSN 282

Query: 75  MEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+KL +   +S+A +P  +  L  L  L ++ C +LV LP+ +  L SL  L++  C
Sbjct: 283 LISLTKLDISWCSSLASLPIELGNLTSLTTLNISWCSDLVSLPNELGNLISLTILDIFRC 342

Query: 134 CKLENVPDTLGKVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
             L ++P  LG + SL  L++S     T++     ++  +  L+  + S     P     
Sbjct: 343 SSLISLPIELGNLTSLIILNISRCSSLTSLPNELGNLISLTTLKIYWCSSLTSLPNELGN 402

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
              L    L  S C     LP+  G + SLT LD+SDC     ++P+++ NL SL  L +
Sbjct: 403 LTSLTT--LNISKCLSLTSLPNEIGNLISLTILDISDCS-SLTSLPNELGNLTSLTTLNI 459

Query: 249 NR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL 301
           ++ ++  +LP  +  L++L  L++  C  L SLP    N   L  +  + CSSL  L
Sbjct: 460 SKCSSLTSLPNELGKLISLTILDISGCSSLPSLPNELGNLISLTTLNISKCSSLTLL 516



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 33/319 (10%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L  L +  C  L+ LP+ + +L  L   ++S C  L   P  + +
Sbjct: 151 SSLTSLPNELGNLTSLIELDISKCSRLTLLPIELGNLISLTKFDISSCLHLILLPNELGN 210

Query: 75  MEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L +L +   +S+  +P+ +  L  L  L +++C +L  LP+ +  L SL  L++S C
Sbjct: 211 LISLIELDISLCSSLTSLPNELGNLTSLTTLNISQCSHLTSLPNELGNLTSLTKLDISSC 270

Query: 134 CKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNEPPA------- 185
             L ++P+ L  + SL +LD+S  +++      +  + +L +L  S C++  +       
Sbjct: 271 SSLTSLPNELSNLISLTKLDISWCSSLASLPIELGNLTSLTTLNISWCSDLVSLPNELGN 330

Query: 186 ----------SASWHLHLPFNL--------LGKSSCPVALMLPS-LTGVCSLTKLDLSDC 226
                       S  + LP  L        L  S C     LP+ L  + SLT L +  C
Sbjct: 331 LISLTILDIFRCSSLISLPIELGNLTSLIILNISRCSSLTSLPNELGNLISLTTLKIYWC 390

Query: 227 GLGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
                ++P+++ NL SL  L +++  +  +LP  I  L++L  L++ DC  L SLP    
Sbjct: 391 S-SLTSLPNELGNLTSLTTLNISKCLSLTSLPNEIGNLISLTILDISDCSSLTSLPNELG 449

Query: 286 N---LQFVRANGCSSLVTL 301
           N   L  +  + CSSL +L
Sbjct: 450 NLTSLTTLNISKCSSLTSL 468



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 29/199 (14%)

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+  +P+ +  L  L  L +++C +L  LP+ ++ L SL  LN+S C  L ++P+ LG +
Sbjct: 8   SLTSLPNELGNLISLTTLDISKCSSLTSLPNELDNLTSLTILNISSCSSLTSLPNELGNL 67

Query: 147 ESLEELDVSGTAIRR--PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCP 204
            SL ELD+S  +     P      + NL SL                   F++   SSC 
Sbjct: 68  TSLIELDISKCSCLTLLPIE----LGNLISLT-----------------KFDI---SSCS 103

Query: 205 VALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISG 262
             + LP+ L  + SLTKLD+S C     ++P+++ NL SL  L ++  ++  +LP  +  
Sbjct: 104 YLISLPNELGNLTSLTKLDISSCS-RLTSLPNELGNLTSLTTLNISLCSSLTSLPNELGN 162

Query: 263 LLNLEELELEDCKRLQSLP 281
           L +L EL++  C RL  LP
Sbjct: 163 LTSLIELDISKCSRLTLLP 181



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 1/127 (0%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L  L +  C +L+SLP  I +L  L  L++S CS L   P  + +
Sbjct: 391 SSLTSLPNELGNLTSLTTLNISKCLSLTSLPNEIGNLISLTILDISDCSSLTSLPNELGN 450

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L +   +S+  +P+ +  L  L +L ++ C +L  LP+ +  L SL TLN+S C
Sbjct: 451 LTSLTTLNISKCSSLTSLPNELGKLISLTILDISGCSSLPSLPNELGNLISLTTLNISKC 510

Query: 134 CKLENVP 140
             L  +P
Sbjct: 511 SSLTLLP 517



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 11/139 (7%)

Query: 673 LSLAIEL--LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQ 730
           +SL IEL  L  L+ L ++ C +L  LP  +  L  L+TL +   S     P    +   
Sbjct: 346 ISLPIELGNLTSLIILNISRCSSLTSLPNELGNLISLTTLKIYWCSSLTSLPNELGNLTS 405

Query: 731 LLEIHL-EGTAIRGLPASIELLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           L  +++ +  ++  LP  I    GN++S    ++ DC +L SLP+ +  L SL  +  S 
Sbjct: 406 LTTLNISKCLSLTSLPNEI----GNLISLTILDISDCSSLTSLPNELGNLTSLTTLNISK 461

Query: 786 CSKLKNVTETLGKVESLEV 804
           CS L ++   LGK+ SL +
Sbjct: 462 CSSLTSLPNELGKLISLTI 480



 Score = 42.4 bits (98), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 11/202 (5%)

Query: 610 QQGQFVKMISVD----SGCMSCYKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQV-- 663
           + G  + +I +D    S   S   + G  T    +      CS L    +E  ++  +  
Sbjct: 207 ELGNLISLIELDISLCSSLTSLPNELGNLT--SLTTLNISQCSHLTSLPNELGNLTSLTK 264

Query: 664 --LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREF 721
             +S  + +  L   +  L  L +L ++ C +L  LP  +  L  L+TLN+S  S     
Sbjct: 265 LDISSCSSLTSLPNELSNLISLTKLDISWCSSLASLPIELGNLTSLTTLNISWCSDLVSL 324

Query: 722 PEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           P    +   L  + +   +++  LP  +  L+  I+ N+  C +L SLP+ +  L SL  
Sbjct: 325 PNELGNLISLTILDIFRCSSLISLPIELGNLTSLIILNISRCSSLTSLPNELGNLISLTT 384

Query: 781 MYPSGCSKLKNVTETLGKVESL 802
           +    CS L ++   LG + SL
Sbjct: 385 LKIYWCSSLTSLPNELGNLTSL 406



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 1/124 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  L  L +  C +L  LP  +  L  L+TLN+S        P    +   L  + + + 
Sbjct: 379 LISLTTLKIYWCSSLTSLPNELGNLTSLTTLNISKCLSLTSLPNEIGNLISLTILDISDC 438

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+     N+  C +L SLP+ +  L SL ++  SGCS L ++   LG 
Sbjct: 439 SSLTSLPNELGNLTSLTTLNISKCSSLTSLPNELGKLISLTILDISGCSSLPSLPNELGN 498

Query: 799 VESL 802
           + SL
Sbjct: 499 LISL 502



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L++L ++ C +L  LP  +  L  L+TLN+S  S     P    +   L ++ +   
Sbjct: 211 LISLIELDISLCSSLTSLPNELGNLTSLTTLNISQCSHLTSLPNELGNLTSLTKLDISSC 270

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L      ++  C +L SLP  +  L SL  +  S CS L ++   LG 
Sbjct: 271 SSLTSLPNELSNLISLTKLDISWCSSLASLPIELGNLTSLTTLNISWCSDLVSLPNELGN 330

Query: 799 VESLEV 804
           + SL +
Sbjct: 331 LISLTI 336



 Score = 39.7 bits (91), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D +S+T +P+ +  LT L  L +  C +L+SLP  +  L  L  L++SGCS L   P  +
Sbjct: 437 DCSSLTSLPNELGNLTSLTTLNISKCSSLTSLPNELGKLISLTILDISGCSSLPSLPNEL 496

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLP 99
            ++  L+ L +         SS+ LLP
Sbjct: 497 GNLISLTTLNISKC------SSLTLLP 517


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 15/285 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L LD   +T +P+ I  L  L+ L L   + L  LP  I+ L+ LR L LS
Sbjct: 88  IGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQ-LVILPKEINQLQNLRVLGLS 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-LPSSI 119
             ++LK  P+ +  +E+L  L L    +  +P+ I  L  L+ L L   KN++  LP  I
Sbjct: 147 N-NQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDL--SKNILTILPKEI 203

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK+L+ L LS   +L+ +P  +G++E+L+ L +S   +    + I  +KNL  LY   
Sbjct: 204 GQLKNLRELYLS-SNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGK 262

Query: 180 --CNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSD 236
                 P       +L    LG +   +   +P+ +  + +L  L L +      A+P +
Sbjct: 263 NLLTTLPKEVGQLKNLKMLDLGYNQFKI---IPNEIEQLQNLRTLRLRNNQF--TALPKE 317

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           I  L +L+ L+LN N   TLP  I  L NL+ L+L D  +L++LP
Sbjct: 318 IRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLND-NQLKTLP 361



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 127/267 (47%), Gaps = 31/267 (11%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L    +  +P  I  L  L+ L L   + L++LP  I  LK L+TL L   ++L
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQ-LTTLPNEIGQLKNLQTLNLD-TNQL 104

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
              P  +  + +L  L L    +  +P  I  L  L +L L+  + L  LP  I  L++L
Sbjct: 105 TTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQ-LKILPKEIGQLENL 163

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
           +TL+L    +L+ +P+ +G++++L+ LD+S   +      I  +KNLR LY S       
Sbjct: 164 QTLDLY-TNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLS------- 215

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
             S  L                 LP   G + +L  L LSD  L    +P++I  L +L 
Sbjct: 216 --SNQLK---------------TLPKEIGQLENLQTLHLSDNQL--TTLPNEIGQLKNLY 256

Query: 245 ELYLNRNNFVTLPASISGLLNLEELEL 271
           ELYL +N   TLP  +  L NL+ L+L
Sbjct: 257 ELYLGKNLLTTLPKEVGQLKNLKMLDL 283



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L +LYL    +T +P  +  L  L++L L G      +P  I  L+ LRTL L 
Sbjct: 249 IGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDL-GYNQFKIIPNEIEQLQNLRTLRLR 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++    P+ +  +++L  L+L+   +  +P+ IE L  L++L LN+ + L  LP+ I 
Sbjct: 308 N-NQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQ-LKTLPNEIE 365

Query: 121 GLKSLKTLNLSG 132
            L++L+ L+L  
Sbjct: 366 KLQNLQVLDLRN 377



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 4/175 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L +LYL    +  +P  I  L  L+ L L   + L++LP  I  LK L  L L 
Sbjct: 203 IGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQ-LTTLPNEIGQLKNLYELYL- 260

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G + L   P+ V  +++L  L L       +P+ IE L  L  L L   +    LP  I 
Sbjct: 261 GKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQ-FTALPKEIR 319

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL 175
            L++L+ L L+   +L+ +P+ + K+++L+ LD++   ++   + I  ++NL+ L
Sbjct: 320 QLQNLQVLFLNNN-QLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVL 373


>gi|77696207|gb|ABB00838.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 162/386 (41%), Gaps = 101/386 (26%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +LY+  + + ++    + LT L+ + L   ++L  LP  +S    L  L+LS C    
Sbjct: 101 LVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELP-DLSHATNLERLDLSYCE--- 156

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                               S+ E+PSS   L  LE L +N C NL  +P+ +N L SL+
Sbjct: 157 --------------------SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-LASLE 195

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           T+N  GC +L N+P       ++ +L VS TA+     SI     L  L  S   +    
Sbjct: 196 TVNTRGCSRLRNIPVM---STNITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSGK---- 248

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                     L G +  P+           SL +LDL D         SDI+        
Sbjct: 249 ----------LKGITHLPI-----------SLKQLDLID---------SDIE-------- 270

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
                   T+P  I  L  L  L L  C+RL SLP++P +L+F+ A+ C SL T+F  L 
Sbjct: 271 --------TIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLN 322

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             +++    NC    KL ++   AI           V       + + PG ++P  F +Q
Sbjct: 323 TPKAELNFTNC---FKLGQQAQRAI-----------VQRSLLLGTTLLPGREVPAEFDHQ 368

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAIC 392
            +G+++T+ RP          GF +C
Sbjct: 369 GKGNTLTI-RPG--------TGFVVC 385



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 22/138 (15%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGC---KNLSSLPVTISSLKCLRTLELSGC 62
           +++ LY+  T++ E+P SI   + LE L++      K ++ LP+++  L  +        
Sbjct: 214 NITQLYVSRTAVEEMPPSIRFCSRLERLSVSSSGKLKGITHLPISLKQLDLID------- 266

Query: 63  SKLKKFPQIVASMEDLSKLYLDG----TSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S ++  P+ + S+  L  L L G     S+ E+PSS      L  L  ++C++L  +   
Sbjct: 267 SDIETIPECIKSLHLLYILNLSGCRRLASLPELPSS------LRFLMADDCESLETVFCP 320

Query: 119 INGLKSLKTLNLSGCCKL 136
           +N  K+   LN + C KL
Sbjct: 321 LNTPKA--ELNFTNCFKL 336


>gi|356542395|ref|XP_003539652.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1396

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 133/296 (44%), Gaps = 22/296 (7%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           + D  L+ +S+  +  S +   GL  + L  C++++ +P  +S    L+ L L  C KLK
Sbjct: 602 IVDFKLNHSSLM-LEKSFKKYEGLTFINLSQCQSITRIP-DVSGAINLKVLTLDKCRKLK 659

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIEL--LPGLELLYLNECKNLVRLPSSINGLKS 124
            F + +  M +L  +Y+       + S +    LP LE+L  + C  L   P  +  +  
Sbjct: 660 GFDKSIGFMRNL--VYVSALRCNMLKSFVPSMSLPSLEVLSFSFCSRLEHFPDVMEEMDR 717

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
              + L     ++  P ++GK+  LE LD+SG      +  +FL+  L +L   GC+   
Sbjct: 718 PLKIQLVNTA-IKEFPMSIGKLTGLEYLDISGCKKLNISRKLFLLPKLETLLVDGCSH-- 774

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                        +G+S            G  +L  L LS+  L    + + +     L+
Sbjct: 775 -------------IGQSFKRFKERHSMANGCPNLRTLHLSETNLSNEELYAILKGFPRLE 821

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            L ++ N+F +LP  I     L+ L++  CK L S+P++PP++Q V A  C  L +
Sbjct: 822 ALKVSYNDFHSLPECIKDSKQLKSLDVSYCKNLSSIPELPPSIQKVNARYCGRLTS 877



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 20/174 (11%)

Query: 647 CSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPR 699
           CSRL    + FPD+++ +          T I+E  ++I  L GL  L ++GCK L  + R
Sbjct: 702 CSRL----EHFPDVMEEMDRPLKIQLVNTAIKEFPMSIGKLTGLEYLDISGCKKL-NISR 756

Query: 700 TISALKYLSTLNLSGLS-------KFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
            +  L  L TL + G S       +F+E   + +    L  +HL  T +        L  
Sbjct: 757 KLFLLPKLETLLVDGCSHIGQSFKRFKERHSMANGCPNLRTLHLSETNLSNEELYAILKG 816

Query: 753 GNILSNLKDCKN-LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
              L  LK   N   SLP  I   + L+ +  S C  L ++ E    ++ +  R
Sbjct: 817 FPRLEALKVSYNDFHSLPECIKDSKQLKSLDVSYCKNLSSIPELPPSIQKVNAR 870



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           +I  +  LV ++   C  L+    ++S L  L  L+ S  S+   FP++    D+ L+I 
Sbjct: 664 SIGFMRNLVYVSALRCNMLKSFVPSMS-LPSLEVLSFSFCSRLEHFPDVMEEMDRPLKIQ 722

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           L  TAI+  P SI  L+G    ++  CK L ++   +  L  L  +   GCS +
Sbjct: 723 LVNTAIKEFPMSIGKLTGLEYLDISGCKKL-NISRKLFLLPKLETLLVDGCSHI 775


>gi|224098439|ref|XP_002334559.1| predicted protein [Populus trichocarpa]
 gi|222873097|gb|EEF10228.1| predicted protein [Populus trichocarpa]
          Length = 422

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 172/407 (42%), Gaps = 85/407 (20%)

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
           C  L  LP SI  LKSL+T+NL  C  L+ +P+ LG ++ L +L +  T ++   SS  +
Sbjct: 2   CYGLQNLPESICELKSLETMNLQSCPSLKKLPEKLGNMQVLTDLLLDETGVQNLPSSTGI 61

Query: 169 MKNLRSLYFSGCN----------EPPASASWHLH---LPFNLLGKSSCPV---------- 205
           +K L+ L   G             P AS+ +      L   L  + + P           
Sbjct: 62  LKKLKKLLVRGSGLGFGLEVQRYRPQASSFYSRQSRRLEAQLQRQEAFPSLDSNAFHSKE 121

Query: 206 ------ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                   + PS +G+ SLT LD+S+  L    I  ++ +L SL++L L  N+F  LPA 
Sbjct: 122 LALKQQPFLPPSFSGLSSLTTLDISNRYLSNNDISINLGSLSSLQDLNLAGNHFSELPAG 181

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL------------VTLFGALKL 307
              L  LE+L+L  C  L  + +IP +L+ + A  C+SL            + L G  KL
Sbjct: 182 TGHLAKLEKLDLSRCLNLLFISEIPSSLRALVARDCTSLEKVSIQSKTAPDLLLGGCGKL 241

Query: 308 CRSKYTIINCIDSLKLLR-KNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFM-Y 365
             ++   +  +++  ++R +N   +S   + + LQ +S  G    +V PGS +P WFM Y
Sbjct: 242 --AEIQGLESVENKPVIRMENCNNLSNNSKEILLQVLSK-GKLPDVVLPGSDVPHWFMQY 298

Query: 366 QNEGSSITVTRPS---------YLYNVNKVVGFAIC---------------CVFQVPKHS 401
           Q + SS     P           ++ V   +  A C               C   + K  
Sbjct: 299 QRDRSSTKFRIPPLSAGLSPGLIVWTVYAAIEVARCTRPYLNIQIPTCISLCSASIRKKK 358

Query: 402 TGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLP 448
               LF++ P  ++  S                G    DH W++++P
Sbjct: 359 DDNELFYTRPCLDISSS---------------HGCYDGDHSWVIYIP 390



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
           GC  L+ LP +I  LK L T+NL      ++ PE   +   L ++ L+ T ++ LP+S
Sbjct: 1   GCYGLQNLPESICELKSLETMNLQSCPSLKKLPEKLGNMQVLTDLLLDETGVQNLPSS 58


>gi|402479148|gb|AFQ55816.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479158|gb|AFQ55821.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 23/167 (13%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + +VP S+  L  L  L L+ C NLS   V +S LK L  L LSGCS L   P+ + +M 
Sbjct: 11  LVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMP 70

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
            L +L LDGT+I  +P SI  L  LE L L  C++                       L 
Sbjct: 71  CLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDGTELQ 130

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
            LP+SI  LKSL+ L+L  C  L  +PDT+ +++SL+EL ++G+A++
Sbjct: 131 TLPNSIGYLKSLQKLHLMHCASLSTIPDTINELKSLKELFLNGSAMK 177



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 49/230 (21%)

Query: 31  ELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IA 89
           E L L+ C  L  +P ++ +LK L  L+L  CS L KF   V+ ++ L KL+L G S ++
Sbjct: 1   EKLVLERCNLLVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLS 60

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            +P +I  +P L+ L L+    +  LP SI  L++L+ L+L GC  ++ +P  +G + SL
Sbjct: 61  VLPENIGAMPCLKELLLDGTA-IKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSL 119

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           EEL + GT ++   +SI  +K+L+ L+   C    AS S                     
Sbjct: 120 EELYLDGTELQTLPNSIGYLKSLQKLHLMHC----ASLS--------------------- 154

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                                  IP  I+ L SLKEL+LN +    LP S
Sbjct: 155 ----------------------TIPDTINELKSLKELFLNGSAMKELPLS 182



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 2/133 (1%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++ +K L  L+L G S ++ +P +I  +  L+ L L G   + +LP +I  L+ L  L L
Sbjct: 42  VSGLKRLEKLFLSGCSNLSVLPENIGAMPCLKELLLDGTA-IKNLPESIYRLENLEKLSL 100

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GC  +K+ P  + ++  L +LYLDGT +  +P+SI  L  L+ L+L  C +L  +P +I
Sbjct: 101 KGCRSIKELPLCIGTLTSLEELYLDGTELQTLPNSIGYLKSLQKLHLMHCASLSTIPDTI 160

Query: 120 NGLKSLKTLNLSG 132
           N LKSLK L L+G
Sbjct: 161 NELKSLKELFLNG 173



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L  C NL +    +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 24  LLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCLKELLLDGTAIK 83

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +LK C+++K LP  I  L SL  +Y  G ++L+ +  ++G ++SL
Sbjct: 84  NLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDG-TELQTLPNSIGYLKSL 142

Query: 803 E 803
           +
Sbjct: 143 Q 143



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 23/117 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L +L LDGT+I  +P SI  L  LE L+LKGC+++  LP+ I +L  L  L L 
Sbjct: 66  IGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLD 125

Query: 61  G-----------------------CSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSS 94
           G                       C+ L   P  +  ++ L +L+L+G+++ E+P S
Sbjct: 126 GTELQTLPNSIGYLKSLQKLHLMHCASLSTIPDTINELKSLKELFLNGSAMKELPLS 182



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 24/140 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S L E     P + ++L DGT I+ L  +I  L  L +L+L GC++++ LP  I  L 
Sbjct: 58  NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLT 117

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L                         E++L+GT ++ LP SI  L      +L  C +L
Sbjct: 118 SLE------------------------ELYLDGTELQTLPNSIGYLKSLQKLHLMHCASL 153

Query: 766 KSLPSTINGLRSLRMMYPSG 785
            ++P TIN L+SL+ ++ +G
Sbjct: 154 STIPDTINELKSLKELFLNG 173



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           L  ++G+  L KL LS C    + +P +I  +  LKEL L+      LP SI  L NLE+
Sbjct: 39  LVDVSGLKRLEKLFLSGCS-NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLEK 97

Query: 269 LELEDCKRLQSLP 281
           L L+ C+ ++ LP
Sbjct: 98  LSLKGCRSIKELP 110


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 12/269 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLT--LKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +L  L L    I ++P S   L  LE LT    G   L+++P  I  LK +  L L+  +
Sbjct: 146 ELQKLKLSSNKIAKIPDS---LCALEQLTELYMGYNALTAIPDEIGKLKNMNILNLT-FN 201

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           K+ K P  + ++E L++LY++  ++  +P  I  L  +++L LN   N+ ++P S+  L+
Sbjct: 202 KIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNN-NNIEKIPDSLCALE 260

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            L  LN+     L  +PD + K++S++ LD+S   I +   S+  ++ L  LY  G +  
Sbjct: 261 QLTELNVRYNA-LTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYM-GSDAL 318

Query: 184 PASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
            A       L    +L  S    A +  SL  +  LTKL++    L   AIP +I  L S
Sbjct: 319 TAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNAL--TAIPDEITKLKS 376

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELEL 271
           LK L LN NN   +P S+  L  L EL +
Sbjct: 377 LKILNLNHNNIAKIPDSLCALEQLTELNM 405



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 29/271 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L++LY++  ++T +P  I  L  +++L L    N+  +P ++ +L+ L  L + 
Sbjct: 210 LCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNN-NNIEKIPDSLCALEQLTELNVR 268

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + L   P  +  ++ +  L L   +IA++P S+  L  L  LY+     L  +P  I 
Sbjct: 269 -YNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMG-SDALTAIPDEIT 326

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LKS+K L+LS   K   +PD+L  +E L +L++   A+      I  +K+L+ L  +  
Sbjct: 327 KLKSMKILDLS-FSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLKSLKILNLNHN 385

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           N                       +A +  SL  +  LT+L++    L   AIP +I  L
Sbjct: 386 N-----------------------IAKIPDSLCALEQLTELNMVSNAL--TAIPDEISKL 420

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL 271
            S+K L L+ N    +P S+  L  L EL++
Sbjct: 421 KSMKTLNLSFNKIAKIPDSLCALEQLTELDM 451



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 27/201 (13%)

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
           P+ +    +L KL L    IA++P S+  L  L  LY+     L  +P  I  LK++  L
Sbjct: 138 PRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMG-YNALTAIPDEIGKLKNMNIL 196

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
           NL+   K+  +PD+L  +E L EL +   A+      I  +K+++ L  +  N       
Sbjct: 197 NLT-FNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNN------- 248

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                           +  +  SL  +  LT+L++    L   AIP +I  L S+K L L
Sbjct: 249 ----------------IEKIPDSLCALEQLTELNVRYNAL--TAIPDEITKLKSMKILDL 290

Query: 249 NRNNFVTLPASISGLLNLEEL 269
           + NN   +P S+  L  L EL
Sbjct: 291 SSNNIAKIPDSLCALEQLTEL 311



 Score = 39.7 bits (91), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 6/95 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLT-LKGCKN-LSSLPVTISSLKCLRTLE 58
           +  +K L  L L+  +I ++P S   L  LE LT L    N L+++P  IS LK ++TL 
Sbjct: 371 ITKLKSLKILNLNHNNIAKIPDS---LCALEQLTELNMVSNALTAIPDEISKLKSMKTLN 427

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPS 93
           LS  +K+ K P  + ++E L++L +   ++  +PS
Sbjct: 428 LS-FNKIAKIPDSLCALEQLTELDMMSNALTSIPS 461


>gi|357486939|ref|XP_003613757.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515092|gb|AES96715.1| Disease resistance-like protein [Medicago truncatula]
          Length = 807

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 2/125 (1%)

Query: 6   DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           +L  L+LD   ++ +V  S+ LL  LE L L  C +L  LP  I+ L  L+T+ L  C+ 
Sbjct: 681 NLKKLHLDSCKNLVKVHDSVGLLKKLEDLNLNRCTSLRVLPHGIN-LPSLKTMSLRNCAS 739

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           LK+FP+I+  ME+++ L L  T I+E+P SIELL GL  L ++ C+ LV LPSSI  L  
Sbjct: 740 LKRFPEILEKMENITYLGLSDTGISELPFSIELLEGLTNLTIDRCQELVELPSSIFMLPK 799

Query: 125 LKTLN 129
           L+T+N
Sbjct: 800 LETVN 804



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 47/158 (29%)

Query: 48  ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
           I   K LR ++LSGC  LK+ P I  +                        P L+ L+L+
Sbjct: 653 IMKFKSLREMKLSGCKFLKQVPDISGA------------------------PNLKKLHLD 688

Query: 108 ECKNLVRLPSSINGLK-----------------------SLKTLNLSGCCKLENVPDTLG 144
            CKNLV++  S+  LK                       SLKT++L  C  L+  P+ L 
Sbjct: 689 SCKNLVKVHDSVGLLKKLEDLNLNRCTSLRVLPHGINLPSLKTMSLRNCASLKRFPEILE 748

Query: 145 KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           K+E++  L +S T I     SI L++ L +L    C E
Sbjct: 749 KMENITYLGLSDTGISELPFSIELLEGLTNLTIDRCQE 786



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           ++ LL  L  L LN C +L  LP  I+ L  L T++L   +  + FPEI    + +  + 
Sbjct: 699 SVGLLKKLEDLNLNRCTSLRVLPHGIN-LPSLKTMSLRNCASLKRFPEILEKMENITYLG 757

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTI 772
           L  T I  LP SIELL G     +  C+ L  LPS+I
Sbjct: 758 LSDTGISELPFSIELLEGLTNLTIDRCQELVELPSSI 794



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTL 57
           +  M++++ L L  T I+E+P SIELL GL  LT+  C+ L  LP +I  L  L T+
Sbjct: 747 LEKMENITYLGLSDTGISELPFSIELLEGLTNLTIDRCQELVELPSSIFMLPKLETV 803



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 11/73 (15%)

Query: 646 NCSRLWEEADEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLP 698
           NC+ L      FP+I++ + +        T I EL  +IELL GL  LT++ C+ L  LP
Sbjct: 736 NCASL----KRFPEILEKMENITYLGLSDTGISELPFSIELLEGLTNLTIDRCQELVELP 791

Query: 699 RTISALKYLSTLN 711
            +I  L  L T+N
Sbjct: 792 SSIFMLPKLETVN 804


>gi|356561802|ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 148/345 (42%), Gaps = 61/345 (17%)

Query: 53  CLRTLELSGCSK---------------LKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIE 96
           C  +LELSG SK               L + P I +S+++L KL  +   ++  +  S+ 
Sbjct: 619 CFTSLELSGISKKFMNLTVLNFDGTECLTQIPDI-SSLQNLVKLTFECCENLVAIHDSVG 677

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
            L  L++L    C  L+  P     L SL+ L+LS C  LE+ P+ LGK+E++ +L++  
Sbjct: 678 FLDKLKILSAFGCGKLMSFPPI--KLISLEQLDLSSCSSLESFPEILGKMENITQLELKY 735

Query: 157 TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-- 214
           T ++    S   +  LR L    C       S  +      +    C   L+LP      
Sbjct: 736 TPLKEFPFSFRNLARLRDLVLVDCGNVQLPISIVMLPELAQIFALGCK-GLLLPKQDKDE 794

Query: 215 --VCSLTK----LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
             V S++     L LS C L +   P  +    ++KEL L+ NNF  LP  I    +L  
Sbjct: 795 EEVSSMSSNVNCLCLSGCNLSDEYFPMVLAWFSNVKELELSCNNFTFLPECIKECHSLIL 854

Query: 269 LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG 328
           L L++C+ LQ +  IPPNL++  A  C SL     A+ L                     
Sbjct: 855 LNLDNCEHLQEIRGIPPNLEYFSAGNCKSLSFCCTAMLLN-------------------- 894

Query: 329 LAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
                       Q + + G+ +    PG++ P+WF  Q+ G S++
Sbjct: 895 ------------QELHETGNTM-FCLPGTRSPEWFEQQSIGPSLS 926



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M++++ L L  T + E P S   L  L  L L  C N+  LP++I  L  L  +   
Sbjct: 722 LGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVDCGNV-QLPISIVMLPELAQIFAL 780

Query: 61  GCS-----KLKKFPQIVASM-EDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNL 112
           GC      K  K  + V+SM  +++ L L G ++++   P  +     ++ L L+ C N 
Sbjct: 781 GCKGLLLPKQDKDEEEVSSMSSNVNCLCLSGCNLSDEYFPMVLAWFSNVKELELS-CNNF 839

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENV 139
             LP  I    SL  LNL  C  L+ +
Sbjct: 840 TFLPECIKECHSLILLNLDNCEHLQEI 866



 Score = 39.7 bits (91), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 23/146 (15%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS---ALKYLST------------- 709
           DGT+       I  L  LV+LT   C+NL  +  ++     LK LS              
Sbjct: 641 DGTECLTQIPDISSLQNLVKLTFECCENLVAIHDSVGFLDKLKILSAFGCGKLMSFPPIK 700

Query: 710 ------LNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCK 763
                 L+LS  S    FPEI    + + ++ L+ T ++  P S   L+      L DC 
Sbjct: 701 LISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVDCG 760

Query: 764 NLKSLPSTINGLRSLRMMYPSGCSKL 789
           N++ LP +I  L  L  ++  GC  L
Sbjct: 761 NVQ-LPISIVMLPELAQIFALGCKGL 785


>gi|77696199|gb|ABB00834.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 164/386 (42%), Gaps = 101/386 (26%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +LY+  + + ++    + LT L+ + L   ++L  LP  +S+   L  ++LS C    
Sbjct: 101 LVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELP-DLSNATNLERMDLSYCE--- 156

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                               S+ E+PSS   L  LE L +N C NL  +P+ +N L SL+
Sbjct: 157 --------------------SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-LASLE 195

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           T+N+ GC +L N+P       ++ +L VS TA+     SI     L  L  S   +    
Sbjct: 196 TVNMRGCSRLRNIPVM---STNITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGK---- 248

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                     L G +  P+           SL +LDL D         SDI+        
Sbjct: 249 ----------LKGITHLPI-----------SLKQLDLID---------SDIE-------- 270

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
                   T+P  I  L  L  L L  C+RL SLP++P +L+F+ A+ C SL T+F  L 
Sbjct: 271 --------TIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETVFCPLN 322

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             +++    NC    KL ++   AI           V       + + PG ++P  F +Q
Sbjct: 323 TPKAELNFTNC---FKLGQQAQRAI-----------VQRSLLLGTTLLPGRELPAEFDHQ 368

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAIC 392
            +G+++T+ RP          GF +C
Sbjct: 369 GKGNTLTI-RPG--------TGFVVC 385



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 47/202 (23%)

Query: 656 EFPDIVQVLSDGTDIRELSLA-----IEL------LFGLVQLTLNGCKNLERLPRTISAL 704
           E PD    LS+ T++  + L+     +E+      L  L  L +N C NL+ +P  ++ L
Sbjct: 137 ELPD----LSNATNLERMDLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-L 191

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI------ELLSGNILSN 758
             L T+N+ G S+ R  P ++++  QL   ++  TA+ G+P SI      E LS +    
Sbjct: 192 ASLETVNMRGCSRLRNIPVMSTNITQL---YVSRTAVEGMPPSIRFCSRLERLSISSSGK 248

Query: 759 LKDCKNL--------------KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV----- 799
           LK   +L              +++P  I  L  L ++  SGC +L ++ E    +     
Sbjct: 249 LKGITHLPISLKQLDLIDSDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMA 308

Query: 800 ---ESLEVRLSSWNRPKMQNDF 818
              ESLE      N PK + +F
Sbjct: 309 DDCESLETVFCPLNTPKAELNF 330


>gi|15241609|ref|NP_199300.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2660663|gb|AAC79134.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|10177477|dbj|BAB10868.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007787|gb|AED95170.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1170

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 28/208 (13%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L +LYLDGT+I  +P +   LT L +L ++GC  L SLP  +   K L+ L LSGCSK
Sbjct: 791 ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQELVLSGCSK 850

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVP--------------------SSIELLPGLELL 104
           L+  P  V  M+ L  L LDGT I ++P                     +++    L+ L
Sbjct: 851 LESVPTDVKDMKHLRLLLLDGTRIRKIPKIKSLKCLCLSRNIAMVNLQDNLKDFSNLKCL 910

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS 164
            +  C+NL  LPS     K L+ LN+ GC +LE+V + L        LD S         
Sbjct: 911 VMKNCENLRYLPSLP---KCLEYLNVYGCERLESVENPLVADRLTLFLDRS-----EELR 962

Query: 165 SIFLMKNLRSLYFSGCNEPPASASWHLH 192
           S FL  N  +L+    +     A W  H
Sbjct: 963 STFLFTNCHNLFQDAKDSISTYAKWKCH 990



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 8/163 (4%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSL-PVTISSLKCLRTLE 58
           +++ K+L  L L+G TS+ ++P  +E +  L  L ++ C +L+ L  + +SSLK L    
Sbjct: 720 LSNAKNLERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKILI--- 776

Query: 59  LSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           LS CSKL++F  I    E+L +LYLDGT+I  +P +   L  L +L +  C  L  LP  
Sbjct: 777 LSDCSKLEEFEVIS---ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKR 833

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           +   K+L+ L LSGC KLE+VP  +  ++ L  L + GT IR+
Sbjct: 834 LGKQKALQELVLSGCSKLESVPTDVKDMKHLRLLLLDGTRIRK 876



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 208/496 (41%), Gaps = 77/496 (15%)

Query: 39   KNLSSLPVTISSLK----------CLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TS 87
            +NL  L +  SS+K           L+   LS  SKL     + ++ ++L +L L+G TS
Sbjct: 678  ENLVDLELPYSSIKKVWEGVKDTPILKWANLSYSSKLTNLLGL-SNAKNLERLNLEGCTS 736

Query: 88   IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
            + ++P  +E +  L  L +  C +L  L S    + SLK L LS C KLE         E
Sbjct: 737  LLKLPQEMENMKSLVFLNMRRCTSLTCLQSI--KVSSLKILILSDCSKLEEFEVI---SE 791

Query: 148  SLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVAL 207
            +LEEL + GTAI+    +   +  L  L   GC E  +       LP   LGK      L
Sbjct: 792  NLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELES-------LP-KRLGKQKALQEL 843

Query: 208  MLPSLTGVCSLTKLDLSDCG-----LGEAAIPSDIDNLHSLKELYLNRN-NFVTLPASIS 261
            +L   + + S+   D+ D       L +      I  + SLK L L+RN   V L  ++ 
Sbjct: 844  VLSGCSKLESVPT-DVKDMKHLRLLLLDGTRIRKIPKIKSLKCLCLSRNIAMVNLQDNLK 902

Query: 262  GLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL-----------VTLF-GALKLCR 309
               NL+ L +++C+ L+ LP +P  L+++   GC  L           +TLF    +  R
Sbjct: 903  DFSNLKCLVMKNCENLRYLPSLPKCLEYLNVYGCERLESVENPLVADRLTLFLDRSEELR 962

Query: 310  SKYTIINC-------IDSLKLLRK---NGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
            S +   NC        DS+    K   + LA+    E  E   VS  G   +  +PG  +
Sbjct: 963  STFLFTNCHNLFQDAKDSISTYAKWKCHRLAV----ECYEQDIVS--GAFFNTCYPGYIV 1016

Query: 360  PKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSM 419
            P WF +Q  GS +      + YN   + G A+C V  V  H     +  S+    ++C++
Sbjct: 1017 PSWFDHQAVGSVLEPRLEPHWYNT-MLSGIALCAV--VSFHENQDPIIGSF---SVKCTL 1070

Query: 420  DGSGEGHYIYFRGKF------GHVVSDHLWLLF-----LPRHGHNWQFESNLIRLSFRSI 468
                E   + F          G + +DH+++ +     L  H          +++ F   
Sbjct: 1071 QFENEDGSLRFDCDIGCLNEPGMIEADHVFIGYVTCSRLKDHHSIPIHHPTTVKMQFHLT 1130

Query: 469  SDPTWKVKRCGFHPIY 484
                 KV  CGF  +Y
Sbjct: 1131 DACKSKVVDCGFRLMY 1146



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 25/146 (17%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLN----------------------LSGLSKFRE 720
           L +L L GC +L +LP+ +  +K L  LN                      LS  SK  E
Sbjct: 726 LERLNLEGCTSLLKLPQEMENMKSLVFLNMRRCTSLTCLQSIKVSSLKILILSDCSKLEE 785

Query: 721 FPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           F  I+   + L E++L+GTAI+GLP +   L+  ++ N++ C  L+SLP  +   ++L+ 
Sbjct: 786 FEVIS---ENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQKALQE 842

Query: 781 MYPSGCSKLKNVTETLGKVESLEVRL 806
           +  SGCSKL++V   +  ++ L + L
Sbjct: 843 LVLSGCSKLESVPTDVKDMKHLRLLL 868



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 23/171 (13%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           +CS+L E      ++ ++  DGT I+ L  A   L  LV L + GC  LE LP+ +   K
Sbjct: 779 DCSKLEEFEVISENLEELYLDGTAIKGLPPAAGDLTRLVVLNMEGCTELESLPKRLGKQK 838

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIEL----LSGNI------ 755
            L  L LSG SK    P        L  + L+GT IR +P    L    LS NI      
Sbjct: 839 ALQELVLSGCSKLESVPTDVKDMKHLRLLLLDGTRIRKIPKIKSLKCLCLSRNIAMVNLQ 898

Query: 756 -----LSNL-----KDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
                 SNL     K+C+NL+ LPS    L  L +    GC +L++V   L
Sbjct: 899 DNLKDFSNLKCLVMKNCENLRYLPSLPKCLEYLNVY---GCERLESVENPL 946


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 37/302 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L +L LD   +T +   IE L  L+ L L   + L+++   I  LK L+ L+  
Sbjct: 67  IGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQ-LTTILKEIEQLKNLQVLDF- 124

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +++    Q +  +++L  L+L+   +  +P  I  L  L+ L L   + L+ LP  I 
Sbjct: 125 GSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQ-LITLPKEIA 183

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+ L LS   +L  +P  +G++E L+EL++    +      I  +KNL+ LY S  
Sbjct: 184 QLKNLQELYLSEN-QLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSEN 242

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
                                     + LP   G +  L KL L+   L    IP++I  
Sbjct: 243 Q------------------------LMTLPKEIGQLEKLQKLYLNANQL--TTIPNEIAQ 276

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANG 294
           L +L+ L+L+ N F T+P     L NL+EL L D  +L ++P+    LQ     ++R N 
Sbjct: 277 LQNLQVLFLSYNQFKTIPVEFGQLKNLQELNL-DANQLTTIPKEIGQLQNLQTLYLRNNQ 335

Query: 295 CS 296
            S
Sbjct: 336 FS 337



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 51/218 (23%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R L+LS   KLK  P+ +  +++L +L LD   +  +   IE L  L+ L L +   L 
Sbjct: 50  VRVLDLSE-QKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNL-DANQLT 107

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            +   I  LK+L+ L+  G  ++  +   +G++++L+ L ++   +      I  +KNL+
Sbjct: 108 TILKEIEQLKNLQVLDF-GSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQ 166

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           +L             W+  L                                       +
Sbjct: 167 TLNL-----------WNNQL-------------------------------------ITL 178

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           P +I  L +L+ELYL+ N  +TLP  I  L  L+EL L
Sbjct: 179 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNL 216


>gi|402479188|gb|AFQ55836.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 23/168 (13%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + +VP S+  L  L  L L+ C NLS   V +S LK L  L LSGCS L   P+ + +M 
Sbjct: 11  LVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMP 70

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
            L +L LDGT+I  +P SI  L  LE L L  C++                       L 
Sbjct: 71  CLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTWTSLEELYLDGTGLQ 130

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
            LP+SI  LKSL+ L+L  C  L  +PDT+ +++SL+EL ++G+A+  
Sbjct: 131 TLPNSIGYLKSLQKLHLMHCASLSKIPDTINELKSLKELFLNGSAMEE 178



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 49/230 (21%)

Query: 31  ELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IA 89
           E L L+ C  L  +P ++ +LK L  L+L  CS L KF   V+ ++ L KL+L G S ++
Sbjct: 1   EKLVLERCNLLVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLS 60

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            +P +I  +P L+ L L+    +  LP SI  L++L+ L+L GC  ++ +P  +G   SL
Sbjct: 61  VLPENIGAMPCLKELLLDGTA-IKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTWTSL 119

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           EEL + GT ++   +SI  +K+L+ L+   C                             
Sbjct: 120 EELYLDGTGLQTLPNSIGYLKSLQKLHLMHC----------------------------- 150

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                  SL+K            IP  I+ L SLKEL+LN +    LP S
Sbjct: 151 ------ASLSK------------IPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 25/144 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L +L LDGT+I  +P SI  L  LE L+LKGC+++  LP+ I            
Sbjct: 66  IGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCI------------ 113

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
                        +   L +LYLDGT +  +P+SI  L  L+ L+L  C +L ++P +IN
Sbjct: 114 ------------GTWTSLEELYLDGTGLQTLPNSIGYLKSLQKLHLMHCASLSKIPDTIN 161

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG 144
            LKSLK L L+G   +E +P + G
Sbjct: 162 ELKSLKELFLNGSA-MEELPLSPG 184



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L  C NL +    +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 24  LLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCLKELLLDGTAIK 83

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +LK C+++K LP  I    SL  +Y  G + L+ +  ++G ++SL
Sbjct: 84  NLPESIYRLENLEKLSLKGCRSIKELPLCIGTWTSLEELYLDG-TGLQTLPNSIGYLKSL 142

Query: 803 E 803
           +
Sbjct: 143 Q 143



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 24/140 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S L E     P + ++L DGT I+ L  +I  L  L +L+L GC++++ LP  I    
Sbjct: 58  NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTWT 117

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L                         E++L+GT ++ LP SI  L      +L  C +L
Sbjct: 118 SLE------------------------ELYLDGTGLQTLPNSIGYLKSLQKLHLMHCASL 153

Query: 766 KSLPSTINGLRSLRMMYPSG 785
             +P TIN L+SL+ ++ +G
Sbjct: 154 SKIPDTINELKSLKELFLNG 173



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 208 MLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
            L  ++G+  L KL LS C    + +P +I  +  LKEL L+      LP SI  L NLE
Sbjct: 38  FLVDVSGLKRLEKLFLSGCS-NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLE 96

Query: 268 ELELEDCKRLQSLP 281
           +L L+ C+ ++ LP
Sbjct: 97  KLSLKGCRSIKELP 110


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 146/285 (51%), Gaps = 13/285 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+L G  +T  P  I  L  L+ L L   + L++LP  I  LK LR L L+
Sbjct: 88  IGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNR-LTTLPKEIGQLKNLRELYLN 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++   FP+ +  +++L +L L    +  +P+ I  L  L  L+L+    L  L + I 
Sbjct: 147 -TNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLS-YNQLKTLSAEIG 204

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFS 178
            L++L+ L+L+   +L+ +P  +G++++L+ LD++    +     I  +KNL+   L ++
Sbjct: 205 QLQNLQVLDLNDN-QLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 263

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    L  +        P  TG + +L  L L+   L    +P++I
Sbjct: 264 QFKTVPEEIGQLKNLQMLFLNNNQFKTV---PEETGQLKNLQMLSLNANQL--TTLPNEI 318

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             L +L+EL+L+ N   TL A I  L NL++L L D  +L++LP+
Sbjct: 319 RQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRD-NQLKTLPK 362



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 13/279 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L+   +  +P  I  L  L++L L   + L++LP  I  L+ L+ L LSG ++L
Sbjct: 47  DVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQ-LATLPKEIGQLQNLQELHLSG-NQL 104

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
             FP+ +  +++L  L L    +  +P  I  L  L  LYLN        P  I  LK+L
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLN-TNQFTAFPKEIGQLKNL 163

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEP 183
           + LNL    +L+ +P+ +G++++L EL +S   ++  ++ I  ++NL+ L  +       
Sbjct: 164 QQLNLY-ANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLHS 242
           P       +L    L  +        P   G   L  L + D G  +   +P +I  L +
Sbjct: 223 PKEIGQLKNLQMLDLNNNQFKTV---PEEIG--QLKNLQVLDLGYNQFKTVPEEIGQLKN 277

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L+ L+LN N F T+P     L NL+ L L +  +L +LP
Sbjct: 278 LQMLFLNNNQFKTVPEETGQLKNLQMLSL-NANQLTTLP 315



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 30/207 (14%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           D+  L L+   +  +P  I  L  L++L LN  + L  LP  I  L++L+ L+LSG  +L
Sbjct: 47  DVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQ-LATLPKEIGQLQNLQELHLSG-NQL 104

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
              P  +G++++L+ L +S   +      I  +KNLR LY +  N+  A           
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLN-TNQFTA----------- 152

Query: 197 LLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
                        P   G + +L +L+L    L    +P++I  L +L+EL+L+ N   T
Sbjct: 153 ------------FPKEIGQLKNLQQLNLYANQL--KTLPNEIGQLQNLRELHLSYNQLKT 198

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQ 282
           L A I  L NL+ L+L D  +L++LP+
Sbjct: 199 LSAEIGQLQNLQVLDLND-NQLKTLPK 224



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 57/221 (25%)

Query: 71  IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            V + E  SK Y D T   + P  + +L       LNE K L  LP  I  L++L+ L L
Sbjct: 24  FVQAEEGKSKAYTDLTKALKNPLDVRVLD------LNEQK-LKTLPKEIGQLQNLQVLEL 76

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
           +   +L  +P  +G++++L+EL +SG  +      I  +KNL++L               
Sbjct: 77  NNN-QLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTL--------------- 120

Query: 191 LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                                   V S  +L           +P +I  L +L+ELYLN 
Sbjct: 121 ------------------------VLSKNRL---------TTLPKEIGQLKNLRELYLNT 147

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           N F   P  I  L NL++L L    +L++LP     LQ +R
Sbjct: 148 NQFTAFPKEIGQLKNLQQLNLY-ANQLKTLPNEIGQLQNLR 187


>gi|357515237|ref|XP_003627907.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|357515241|ref|XP_003627909.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521929|gb|AET02383.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521931|gb|AET02385.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1110

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 162/389 (41%), Gaps = 62/389 (15%)

Query: 63   SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            SK KKF  +     D  K+      I  +P  +   P LE L L+ C+NLV +  S+  L
Sbjct: 635  SKSKKFVNMTLLNFDECKI------ITHIPD-VSGAPNLERLSLDSCENLVEIHDSVGFL 687

Query: 123  KSLKTLNLSGCCKLENV----------------------PDTLGKVESLEELDVSGTAIR 160
              L+ LNL  C KL N+                      P+ LG ++++  L +  TAIR
Sbjct: 688  DKLEILNLGSCAKLRNLPPIHLTSLQHLNLSHCSSLVSFPEILGNMKNITSLSLEYTAIR 747

Query: 161  RPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG------ 214
                SI  +  L+SL   GC      +S  L      L    C          G      
Sbjct: 748  EFPYSIGNLPRLKSLELHGCGNLLLPSSIILLSELEELSIWQCEGLKSYKQDKGPEKVGS 807

Query: 215  -VCSLTK-LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
             V S  K ++   C + +  I   +    ++ EL L+ N F  LP  I     L  L L+
Sbjct: 808  TVSSNVKYIEFFSCNISDDFIRIGLSWFSNVVELNLSANTFTVLPTCIKECRFLTILILD 867

Query: 273  DCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKL------CRSKYTIINCIDSLKLLRK 326
             C++L+ +  IPPNL+   A  C+SL  L     L      C  +  +++  +SL+ +R 
Sbjct: 868  YCRQLREIRGIPPNLEIFSAIRCTSLNDLDLTNLLVSTKVCCPLRELVLDDCESLQEIRG 927

Query: 327  NGLAISML------------REYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
               +I +L            R  L +Q + + G+K S   PG+Q+P WF ++++G SI+ 
Sbjct: 928  IPPSIELLSARNCRSLTISCRRMLLIQELHEAGNK-SFCLPGTQMPDWFEHRSKGHSIS- 985

Query: 375  TRPSYLYNVNKVVGFAICCVFQVPKHSTG 403
                  +   K    ++C V  + K  TG
Sbjct: 986  -----FWFRGKFPALSLCFVGLMHKIPTG 1009



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 669 DIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
           ++ E+  ++  L  L  L L  C  L  LP     L  L  LNLS  S    FPEI  + 
Sbjct: 676 NLVEIHDSVGFLDKLEILNLGSCAKLRNLPPI--HLTSLQHLNLSHCSSLVSFPEILGNM 733

Query: 729 DQLLEIHLEGTAIRGLPASI 748
             +  + LE TAIR  P SI
Sbjct: 734 KNITSLSLEYTAIREFPYSI 753



 Score = 39.3 bits (90), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 40/197 (20%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSL---------------- 675
            R+ VR++SP  PG  SRLW       DIV+VL   T   E+                  
Sbjct: 512 AREIVRQESPDHPGKRSRLWLTT----DIVEVLEKNTGTSEIQTIVLDFPRYEKMVRWDG 567

Query: 676 -AIELLFGLVQLTL------NGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSR 728
            A + + GL  L +       G KN   LP ++  L++    + S  S F  +P+     
Sbjct: 568 KAFQKMTGLQTLIIRSLCFAEGPKN---LPNSLRVLEWWGYPSQSLPSYF--YPK----- 617

Query: 729 DQLLEIHLEGTAIRGLPASIELLSGNI-LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            +L  + L  ++   L  S      N+ L N  +CK +  +P  ++G  +L  +    C 
Sbjct: 618 -KLAVLKLPHSSFMSLELSKSKKFVNMTLLNFDECKIITHIPD-VSGAPNLERLSLDSCE 675

Query: 788 KLKNVTETLGKVESLEV 804
            L  + +++G ++ LE+
Sbjct: 676 NLVEIHDSVGFLDKLEI 692


>gi|357513919|ref|XP_003627248.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521270|gb|AET01724.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1106

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 197/460 (42%), Gaps = 71/460 (15%)

Query: 1   MASMKDLS--DLYLDGTSIT-EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTL 57
            A M  L   D+Y  G  +  ++P S+ L  GL+           SLP     L+ LR  
Sbjct: 584 FAKMNKLQYLDIYTKGYYVFFQIPRSLNLPQGLK-----------SLP---DELRYLRWA 629

Query: 58  ELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPS 117
                S   KF     + E L  L L  + + ++    + +  L+ L L+    L+ LP+
Sbjct: 630 YYPLESLPSKF-----NGEKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPN 684

Query: 118 SINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
            ++  K+L  ++L  C +L ++  ++  +  LE+LD+ G        S   + +LR L  
Sbjct: 685 -LSKAKNLAIVDLRMCGRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNIHLSSLRYLSL 743

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           +GC            +       +S  + L+    TG+  L+    S  GL         
Sbjct: 744 AGC------------IKLKEFSVTSKEMVLLNLEHTGIKQLS----SSIGLQT------- 780

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
                L++L L+ +    LP SI  L +L  LEL  C++LQ LP++P +L  + A GC S
Sbjct: 781 ----KLEKLLLSHSFIENLPKSIRRLSSLRHLELRHCRKLQRLPKLPSSLITLDATGCVS 836

Query: 298 L--VTL----FGALKLCRSKYTIINCID----SLKLLRKNGLAISMLREYLELQAVSDPG 347
           L  VT        LK  ++K +  NC+     SLK +  N     M   + ++   SD  
Sbjct: 837 LENVTFPSRALQVLKENKTKVSFWNCVKLVEHSLKAIELNAQINMMKFAHKQISTSSDHD 896

Query: 348 HKL--SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTY 405
           +    + V+PGS +PKW +Y+   + + +   S++ + +  + F  C  F VP+  +  +
Sbjct: 897 YDAQGTYVYPGSSVPKWLVYRTTRNYMFIDL-SFVNHSSDQLAFIFC--FIVPQVESEGF 953

Query: 406 LFHSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLL 445
           +           S+ G  E   +Y       + SDH++L+
Sbjct: 954 IL------RFNISVGGEAENIQVYLNKPSQEIKSDHVYLM 987



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 38/189 (20%)

Query: 683 LVQLTLNGCKNLERLPRTI--SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
           L +L L GC +L  L   I  S+L+YLS   L+G  K +EF    +S++ +L ++LE T 
Sbjct: 715 LEKLDLGGCFSLTSLKSNIHLSSLRYLS---LAGCIKLKEFS--VTSKEMVL-LNLEHTG 768

Query: 741 IRGLPASIEL--------LSGNILSNL---------------KDCKNLKSLPSTINGLRS 777
           I+ L +SI L        LS + + NL               + C+ L+ LP   + L +
Sbjct: 769 IKQLSSSIGLQTKLEKLLLSHSFIENLPKSIRRLSSLRHLELRHCRKLQRLPKLPSSLIT 828

Query: 778 LRMMYPSGCSKLKNVT---ETLGKVESLEVRLSSWNRPKM-QNDFDCVEQSAVETVTKLA 833
           L     +GC  L+NVT     L  ++  + ++S WN  K+ ++    +E +A   + K A
Sbjct: 829 LD---ATGCVSLENVTFPSRALQVLKENKTKVSFWNCVKLVEHSLKAIELNAQINMMKFA 885

Query: 834 KAELLRDSD 842
             ++   SD
Sbjct: 886 HKQISTSSD 894


>gi|77696331|gb|ABB00900.1| disease resistance protein [Arabidopsis lyrata]
          Length = 402

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 187/415 (45%), Gaps = 71/415 (17%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L +L L   S + E+ +SI   T L+ L L GC  L  LP +I     L+ L+L
Sbjct: 10  LSNATNLEELDLSSCSGLLELTNSIGKATKLKRLELPGCLLLKKLPSSIGDATNLQVLDL 69

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  L++ P  + ++ +L  L L     +  +P+SIE L  L +L ++EC+NL   P++
Sbjct: 70  FHCESLEELPISIGNLTNLEVLELMRCYKLVTLPTSIETL-NLPVLSMSECENLKTFPTN 128

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           IN L SL  + L  C +L+  P+     +++EELD+  TAI    SSI     L  L  S
Sbjct: 129 IN-LDSLSEIVLEDCTQLKMFPEI---SKNIEELDLRNTAIENVPSSICSWSCLYRLDMS 184

Query: 179 GC--------------------NEPPASASWHLHLPFNL--LGKSSC-PVALMLPSLTGV 215
           GC                     E     SW  +L F L  L    C  ++++ P+++ +
Sbjct: 185 GCRNLKEFPNVPNSIVELDLSKTEIKEVPSWIENL-FRLRTLTMDGCKKLSIISPNISKL 243

Query: 216 CSLTKLDLSDCGL-GEAA---------------IPSDIDNLHSLK--------ELYLNRN 251
            ++  L+L+  G+ G+AA               + SD    + L          L     
Sbjct: 244 ENIEYLELTTGGVSGDAASFYAFVEFSDRDDWTLESDFKVHYILPICLPEMAISLRFFSY 303

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
           +F T+P  I  L  L EL++  C+ L +LPQ+P +L  + A  C SL  + G+ +  +  
Sbjct: 304 DFETIPDCIRRLSGLSELDISGCRNLVALPQLPGSLLSLDAKDCESLERIDGSFQNSKIC 363

Query: 312 YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
               NCI+  +  RK  L  +   EY               + PG+++P  F +Q
Sbjct: 364 LNFANCINLNQEARK--LIQTSACEY--------------ALLPGAEVPAHFTHQ 402



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 51/243 (20%)

Query: 656 EFPDIVQVLSDGTDIRELSLAIELLFGLVQLT-------------LNGCKNLERLPRTIS 702
           E PD    LS+ T++ EL L+     GL++LT             L GC  L++LP +I 
Sbjct: 6   EIPD----LSNATNLEELDLSS--CSGLLELTNSIGKATKLKRLELPGCLLLKKLPSSIG 59

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKD 761
               L  L+L       E P    +   L  + L     +  LP SIE L+  +LS + +
Sbjct: 60  DATNLQVLDLFHCESLEELPISIGNLTNLEVLELMRCYKLVTLPTSIETLNLPVLS-MSE 118

Query: 762 CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR----------LSSWN- 810
           C+NLK+ P+ IN L SL  +    C++LK   E    +E L++R          + SW+ 
Sbjct: 119 CENLKTFPTNIN-LDSLSEIVLEDCTQLKMFPEISKNIEELDLRNTAIENVPSSICSWSC 177

Query: 811 --RPKMQ-----NDFDCVEQSAVETVTKLAKAELLRDSDSWKKN--------VDKCMKLS 855
             R  M       +F  V  S VE    L+K E +++  SW +N        +D C KLS
Sbjct: 178 LYRLDMSGCRNLKEFPNVPNSIVE--LDLSKTE-IKEVPSWIENLFRLRTLTMDGCKKLS 234

Query: 856 TTA 858
             +
Sbjct: 235 IIS 237



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 25/151 (16%)

Query: 673 LSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLL 732
           L  +IE L  L  L+++ C+NL+  P  I+ L  LS + L   ++ + FPEI+ + +   
Sbjct: 102 LPTSIETL-NLPVLSMSECENLKTFPTNIN-LDSLSEIVLEDCTQLKMFPEISKNIE--- 156

Query: 733 EIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS--------------------LPSTI 772
           E+ L  TAI  +P+SI   S     ++  C+NLK                     +PS I
Sbjct: 157 ELDLRNTAIENVPSSICSWSCLYRLDMSGCRNLKEFPNVPNSIVELDLSKTEIKEVPSWI 216

Query: 773 NGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
             L  LR +   GC KL  ++  + K+E++E
Sbjct: 217 ENLFRLRTLTMDGCKKLSIISPNISKLENIE 247



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 29/152 (19%)

Query: 656 EFPD----IVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           EFP+    IV++    T+I+E+   IE LF L  LT++GCK L  +   IS L+ +  L 
Sbjct: 191 EFPNVPNSIVELDLSKTEIKEVPSWIENLFRLRTLTMDGCKKLSIISPNISKLENIEYLE 250

Query: 712 LS--GLS----KFREFPEITSSRDQLLE----------IHLEGTAI---------RGLPA 746
           L+  G+S     F  F E +   D  LE          I L   AI           +P 
Sbjct: 251 LTTGGVSGDAASFYAFVEFSDRDDWTLESDFKVHYILPICLPEMAISLRFFSYDFETIPD 310

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSL 778
            I  LSG    ++  C+NL +LP     L SL
Sbjct: 311 CIRRLSGLSELDISGCRNLVALPQLPGSLLSL 342


>gi|297848110|ref|XP_002891936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337778|gb|EFH68195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1064

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 159/380 (41%), Gaps = 77/380 (20%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNEC 109
           L  L+ ++ S   KLK+ P + ++  +L +L L+G TS+ E+PS+I  L  LE L +N C
Sbjct: 625 LTNLKKMDFSSSRKLKELPDL-SNATNLKRLQLNGCTSLVEIPSTIANLHKLEDLVMNSC 683

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            NL  +P+ IN L SL+ + + GC +L   PD      ++ +L +S TA+ +  +SI L 
Sbjct: 684 VNLEVVPTHIN-LASLERIYMIGCSRLRTFPDM---STNISQLLMSETAVEKVPASIRLW 739

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
             L  +                    ++ G  +       P      SL  LDLS     
Sbjct: 740 SRLSYV--------------------DIRGSGNLKTLTHFPE-----SLWSLDLS----- 769

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF 289
                +DI+ +                P  I  + +L+ LE+  C++L SLP++P +L+ 
Sbjct: 770 ----YTDIEKI----------------PYCIKRIHHLQSLEVTGCRKLASLPELPSSLRL 809

Query: 290 VRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHK 349
           + A  C SL  +   L+   +K    NC       R+  +    L E+            
Sbjct: 810 LMAEDCKSLENVTSPLRTPNAKLNFTNCFKLGGESRRVIIQSLFLYEF------------ 857

Query: 350 LSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHS 409
             +  PG ++P  F +Q  G+S+T+          K   F+    F+V    +  +  H+
Sbjct: 858 --VCLPGREMPPEFNHQARGNSLTIIN-------EKDCSFSGSSKFKVCVMISPNHHHHT 908

Query: 410 YPAHELECSMDGSGEGHYIY 429
               EL       G+  Y Y
Sbjct: 909 KENRELRLKYGIIGKSGYRY 928



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 29/180 (16%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE A    ++ ++  S    ++EL   +     L +L LNGC +L  +P TI+ L  L
Sbjct: 617 KLWEGAQPLTNLKKMDFSSSRKLKELP-DLSNATNLKRLQLNGCTSLVEIPSTIANLHKL 675

Query: 708 STL---------------NLS--------GLSKFREFPEITSSRDQLLEIHLEGTAIRGL 744
             L               NL+        G S+ R FP+++++  QLL   +  TA+  +
Sbjct: 676 EDLVMNSCVNLEVVPTHINLASLERIYMIGCSRLRTFPDMSTNISQLL---MSETAVEKV 732

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           PASI L S     +++   NLK+L      L SL + Y +   K+    + +  ++SLEV
Sbjct: 733 PASIRLWSRLSYVDIRGSGNLKTLTHFPESLWSLDLSY-TDIEKIPYCIKRIHHLQSLEV 791



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 14/143 (9%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  LV+L +   + LE+L      L  L  ++ S   K +E P+++++ + L  + L G 
Sbjct: 602 LENLVELYMRDSQ-LEKLWEGAQPLTNLKKMDFSSSRKLKELPDLSNATN-LKRLQLNGC 659

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK-------N 791
           T++  +P++I  L       +  C NL+ +P+ IN L SL  +Y  GCS+L+       N
Sbjct: 660 TSLVEIPSTIANLHKLEDLVMNSCVNLEVVPTHIN-LASLERIYMIGCSRLRTFPDMSTN 718

Query: 792 VTETL---GKVESLEVRLSSWNR 811
           +++ L     VE +   +  W+R
Sbjct: 719 ISQLLMSETAVEKVPASIRLWSR 741


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 146/285 (51%), Gaps = 13/285 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+L G  +T  P  I  L  L+ L L   + L++LP  I  LK LR L L+
Sbjct: 88  IGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNR-LTTLPKEIGQLKNLRELYLN 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++   FP+ +  +++L +L L    +  +P+ I  L  L  L+L+    L  L + I 
Sbjct: 147 -TNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLS-YNQLKTLSAEIG 204

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFS 178
            L++L+ L+L+   +L+ +P  +G++++L+ LD++    +     I  +KNL+   L ++
Sbjct: 205 QLQNLQVLDLNDN-QLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 263

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    L  +        P  TG + +L  L L+   L    +P++I
Sbjct: 264 QFKTVPEEIGQLKNLQMLFLNNNQFKTV---PEETGQLKNLQMLSLNANQL--TTLPNEI 318

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             L +L+EL+L+ N   TL A I  L NL++L L D  +L++LP+
Sbjct: 319 RQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRD-NQLKTLPK 362



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L    +  +P  I  L  L++L L   + L++LP  I  L+ L+ L LSG ++L
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQ-LATLPKEIGQLQNLQELHLSG-NQL 104

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
             FP+ +  +++L  L L    +  +P  I  L  L  LYLN        P  I  LK+L
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLN-TNQFTAFPKEIGQLKNL 163

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEP 183
           + LNL    +L+ +P+ +G++++L EL +S   ++  ++ I  ++NL+ L  +       
Sbjct: 164 QQLNLY-ANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLHS 242
           P       +L    L  +        P   G   L  L + D G  +   +P +I  L +
Sbjct: 223 PKEIGQLKNLQMLDLNNNQFKTV---PEEIG--QLKNLQVLDLGYNQFKTVPEEIGQLKN 277

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L+ L+LN N F T+P     L NL+ L L +  +L +LP
Sbjct: 278 LQMLFLNNNQFKTVPEETGQLKNLQMLSL-NANQLTTLP 315



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 30/207 (14%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
           D+  L L    +  +P  I  L  L++L LN  + L  LP  I  L++L+ L+LSG  +L
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQ-LATLPKEIGQLQNLQELHLSG-NQL 104

Query: 137 ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFN 196
              P  +G++++L+ L +S   +      I  +KNLR LY +  N+  A           
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLN-TNQFTA----------- 152

Query: 197 LLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
                        P   G + +L +L+L    L    +P++I  L +L+EL+L+ N   T
Sbjct: 153 ------------FPKEIGQLKNLQQLNLYANQL--KTLPNEIGQLQNLRELHLSYNQLKT 198

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQ 282
           L A I  L NL+ L+L D  +L++LP+
Sbjct: 199 LSAEIGQLQNLQVLDLND-NQLKTLPK 224



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 57/221 (25%)

Query: 71  IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            V + E  SK Y D T   + P  + +L       L+E K L  LP  I  L++L+ L L
Sbjct: 24  FVQAEEGKSKAYTDLTKALKNPLDVRVLD------LSEQK-LKTLPKEIGQLQNLQVLEL 76

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
           +   +L  +P  +G++++L+EL +SG  +      I  +KNL++L               
Sbjct: 77  NNN-QLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTL--------------- 120

Query: 191 LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
                                   V S  +L           +P +I  L +L+ELYLN 
Sbjct: 121 ------------------------VLSKNRL---------TTLPKEIGQLKNLRELYLNT 147

Query: 251 NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           N F   P  I  L NL++L L    +L++LP     LQ +R
Sbjct: 148 NQFTAFPKEIGQLKNLQQLNLY-ANQLKTLPNEIGQLQNLR 187


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 149/351 (42%), Gaps = 74/351 (21%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S++ L+ LY+    ++ +P  +E L  L  L + G   L+  P  + SL  L  LE+S
Sbjct: 78  IGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFI-GNNQLTGFPSGVCSLPNLEVLEVS 136

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL  FP +V  ++ L  LY++G  + EVP  + LLP LE+L ++  K L   P  + 
Sbjct: 137 -YNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNK-LSTFPPGVE 194

Query: 121 GLKSLKTLNL---------SGCCKLENV-------------PDTLGKVESLEELDVSGTA 158
            L+ L+ L +         SG C L N+             P  + K++ L EL + G  
Sbjct: 195 KLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQ 254

Query: 159 IRRPTSSIFLMKNLRSLYFSGCN---EPPAS-------------------ASWHLHLP-F 195
           +      + L+ N+  L  S  N    PP                      S    LP  
Sbjct: 255 LTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTEVPSGVCSLPNL 314

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY-------- 247
            +LG    P+  +   +T +  L  L + +C L E   P  +  L +L+ELY        
Sbjct: 315 EVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDE--FPRQVLQLKTLEELYAGGCKFDI 372

Query: 248 ---------------LNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
                          L++N   TLP+++S L NL E+ L+D K   + P++
Sbjct: 373 VPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLDDNK-FGTFPEV 422



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 132/296 (44%), Gaps = 37/296 (12%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
            L L    +T +P  +  +T LE+L +   K L+S+P  I  L+ L  L+  G + L   P
Sbjct: 929  LDLSNQGLTSIPEEVFDITDLEVLDVSNNK-LTSIPEAIGRLQKLYRLDADG-NMLTSLP 986

Query: 70   QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
            Q + S++ L  LY+    + EVPS +  LP LE+L +   K L   P  +  L+ L TL 
Sbjct: 987  QAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNK-LSTFPPGVEKLQKLGTLY 1045

Query: 130  LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
            ++G C L N          LE L V    +      +  ++ LR LY    N+     S 
Sbjct: 1046 INGVCLLPN----------LEVLSVGNNKLSTFPPGVEKLQKLRELYIRD-NQLTEVPSG 1094

Query: 190  HLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA---------------- 232
               LP   +L     P+  +   +T +  L  L +S+C   E                  
Sbjct: 1095 VCSLPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGG 1154

Query: 233  -----IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
                 +P ++ +L  L+ L L++N   TLP+++S L NL E+ L+D K   + P++
Sbjct: 1155 CKFDIVPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDDNK-FGTFPEV 1209



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 43/275 (15%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           ++ L +LY+ G  +TEVPS +  L  LE+L++    NLS+ P  +  L+ LR L + G +
Sbjct: 196 LQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYN-NNLSTFPPGVEKLQKLRELRIYG-N 253

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           +L + P  V  + ++  L +   +++  P   E L  L  LY+N+   L  +PS +  L 
Sbjct: 254 QLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYIND-NQLTEVPSGVCSLP 312

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN-- 181
           +L+ L + G   + ++PD + ++  L+ L V    +      +  +K L  LY  GC   
Sbjct: 313 NLEVLGV-GKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQLKTLEELYAGGCKFD 371

Query: 182 -EPPASAS----WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
             P    S    W+L L  NLL                                  +PS 
Sbjct: 372 IVPDEVGSLQHLWYLALDKNLL--------------------------------KTLPST 399

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           + +LH+L+E+YL+ N F T P  +  L  +E+L++
Sbjct: 400 MSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDI 434



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 39/213 (18%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + S++ L  LY+    +TEVPS +  L  LE+L +   K LS+ P  +  L+ L TL ++
Sbjct: 989  IGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNK-LSTFPPGVEKLQKLGTLYIN 1047

Query: 61   GC-------------SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
            G              +KL  FP  V  ++ L +LY+    + EVPS +  LP LE+L + 
Sbjct: 1048 GVCLLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVG 1107

Query: 108  ECKNLV-RLPSSINGLKSLKTLNLSGC----------------------CKLENVPDTLG 144
              KN + RLP  +  L  LKTL++S C                      CK + VPD +G
Sbjct: 1108 --KNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDEVG 1165

Query: 145  KVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
             ++ L+ L +    ++   S++  + NLR +Y 
Sbjct: 1166 SLQHLQVLALDKNLLKTLPSTMSHLHNLREVYL 1198



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 15/286 (5%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L    +T +P  +  +T LE L +   K L+S+P  +  L+ L  L+ +  + L   P
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEFLDVSNNK-LTSIPEAVGRLQKLYRLD-ADYNTLTSLP 75

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           Q + S++ L+ LY+    ++ +P  +E L  L  L++     L   PS +  L +L+ L 
Sbjct: 76  QAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGN-NQLTGFPSGVCSLPNLEVLE 134

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPAS 186
           +S   KL N P  + K++ L  L ++G  +      + L+ NL  L  S       PP  
Sbjct: 135 VS-YNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGV 193

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLGEAAIPSDIDNLHSLKE 245
                     + G     V       +GVCSL  L+ LS      +  P  ++ L  L+E
Sbjct: 194 EKLQKLRELYIYGNQLTEVP------SGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKLRE 247

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           L +  N    +P  +  L N+E L + +   L + P     LQ +R
Sbjct: 248 LRIYGNQLTEVPPGVCLLPNIEWLSVSN-NNLSTFPPGGEKLQKLR 292



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 6/132 (4%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +A +K LS   +      E P  ++ L  +E L   GCK    +P  + SL+ L+ L L 
Sbjct: 1121 LARLKTLS---VSNCQFAEFPRQVQQLKIMEELYAGGCK-FDIVPDEVGSLQHLQVLALD 1176

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
              + LK  P  ++ + +L ++YLD       P  +  LP +E L +++  N+ RLP++++
Sbjct: 1177 K-NLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISK-NNITRLPTALH 1234

Query: 121  GLKSLKTLNLSG 132
                LK L++SG
Sbjct: 1235 RADKLKHLDVSG 1246



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 6/132 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A +K LS   +    + E P  +  L  LE L   GCK    +P  + SL+ L  L L 
Sbjct: 334 LARLKTLS---VPNCQLDEFPRQVLQLKTLEELYAGGCK-FDIVPDEVGSLQHLWYLALD 389

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             + LK  P  ++ + +L ++YLD       P  +  LP +E L +++  N+ RLP++++
Sbjct: 390 K-NLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISK-NNITRLPTALH 447

Query: 121 GLKSLKTLNLSG 132
               LK L++SG
Sbjct: 448 RADKLKHLDVSG 459


>gi|357513689|ref|XP_003627133.1| Disease resistance protein [Medicago truncatula]
 gi|355521155|gb|AET01609.1| Disease resistance protein [Medicago truncatula]
          Length = 621

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 175/413 (42%), Gaps = 68/413 (16%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           ++ L  +S+  +   ++ L  LE + L  CK+L SLP  +S    L++L LSGC      
Sbjct: 96  EIRLPHSSVEYLWHGMQELVNLEAIDLSECKHLFSLP-DLSEATKLKSLYLSGCE----- 149

Query: 69  PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
                             S  E+ SSI     L  L L+ C  L  L S    L+SL+ +
Sbjct: 150 ------------------SFCEIHSSIFSKDTLVTLILDRCTKLKSLTSE-KHLRSLQKI 190

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTS---SIFLMKNLRSLYFSGC-NEPP 184
           N+ GC  L+    +   + SL+ L  +G  I  P+    S  +  NL  L F+   NE  
Sbjct: 191 NVYGCSSLKEFSLSSDSIASLD-LRNTGIEILHPSINGISKLVWLNLEGLKFANLPNELS 249

Query: 185 ASASWHLHLPFNLLGKSSCPVAL---MLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
              S         L  S+C +     +     G+ SL  L L  CG     +P++I +L 
Sbjct: 250 CLGS------LTKLRLSNCDIVTKSNLEDIFDGLGSLKILYLKYCG-NLLELPTNISSLS 302

Query: 242 SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL 301
           SL EL L+  +  TLP+SI  L  L  L L++C +L SLP++P  ++   A  C+SLV L
Sbjct: 303 SLYELRLDGTDVETLPSSIKLLSELGILWLDNCIKLHSLPELPLEIKEFHAENCTSLVNL 362

Query: 302 FGALKLCRSKY-------TIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVF 354
             +L+    K        +  NC+    ++  N  ++  + E + L       H  SI +
Sbjct: 363 -SSLRAFSEKMEGKEIYISFKNCV----MMNSNQHSLDRVVEDVILTMKRAAHHNRSIRY 417

Query: 355 ----------------PGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAI 391
                           PGS++PK F Y+  GS I +      Y+   +    I
Sbjct: 418 SINAHSYSYNSAVVCLPGSEVPKEFKYRTTGSEIDIRLQDIPYSTGFIYSVVI 470



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 11/176 (6%)

Query: 666 DGTDIRELSLAIELLFGLVQLTLNGCKNLER--LPRTISALKYLSTLNLSGLSKFREFPE 723
           +G     L   +  L  L +L L+ C  + +  L      L  L  L L       E P 
Sbjct: 237 EGLKFANLPNELSCLGSLTKLRLSNCDIVTKSNLEDIFDGLGSLKILYLKYCGNLLELPT 296

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
             SS   L E+ L+GT +  LP+SI+LLS   +  L +C  L SLP        ++  + 
Sbjct: 297 NISSLSSLYELRLDGTDVETLPSSIKLLSELGILWLDNCIKLHSLPELP---LEIKEFHA 353

Query: 784 SGCSKLKNVTETLG---KVESLEVRLSSWNRPKM---QNDFDCVEQSAVETVTKLA 833
             C+ L N++       K+E  E+ +S  N   M   Q+  D V +  + T+ + A
Sbjct: 354 ENCTSLVNLSSLRAFSEKMEGKEIYISFKNCVMMNSNQHSLDRVVEDVILTMKRAA 409



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 30/45 (66%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLP 45
           ++S+  L +L LDGT +  +PSSI+LL+ L +L L  C  L SLP
Sbjct: 298 ISSLSSLYELRLDGTDVETLPSSIKLLSELGILWLDNCIKLHSLP 342


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 145/285 (50%), Gaps = 13/285 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+L G  +T  P  I  L  L+ L L   + L++LP  I  LK LR L L+
Sbjct: 88  IGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNR-LTTLPKEIGQLKNLRELYLN 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  P+ +  +++L +L L    +  +P  I  L  L  L+L+    L  L + I 
Sbjct: 147 -TNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLS-YNQLKTLSAEIG 204

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLYFS 178
            L++L+ L+L+   +L+ +P  +G++++L+ LD++    +     I  +KNL+   L ++
Sbjct: 205 QLQNLQVLDLNDN-QLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 263

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    L  +        P  TG + +L  L L+   L    +P++I
Sbjct: 264 QFKTVPEEIGQLKNLQMLFLNNNQFKTV---PEETGQLKNLQMLSLNANQL--TTLPNEI 318

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             L +L+EL+L+ N   TL A I  L NL++L L D  +L +LP+
Sbjct: 319 RQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRD-NQLTTLPK 362



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 144/309 (46%), Gaps = 18/309 (5%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L    +  +P  I  L  L++L L   + L++LP  I  L+ L+ L LSG ++L
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQ-LATLPKEIGQLQNLQELHLSG-NQL 104

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
             FP+ +  +++L  L L    +  +P  I  L  L  LYLN    L  LP  I  LK+L
Sbjct: 105 TTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLN-TNQLKTLPKEIGQLKNL 163

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEP 183
           + LNL    +L+ +P  +G++++L EL +S   ++  ++ I  ++NL+ L  +       
Sbjct: 164 QQLNLY-ANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLHS 242
           P       +L    L  +        P   G   L  L + D G  +   +P +I  L +
Sbjct: 223 PKEIGQLKNLQMLDLNNNQFKTV---PEEIG--QLKNLQVLDLGYNQFKTVPEEIGQLKN 277

Query: 243 LKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA-----NGCSS 297
           L+ L+LN N F T+P     L NL+ L L +  +L +LP     L+ +R      N   +
Sbjct: 278 LQMLFLNNNQFKTVPEETGQLKNLQMLSL-NANQLTTLPNEIRQLKNLRELHLSYNQLKT 336

Query: 298 LVTLFGALK 306
           L    G LK
Sbjct: 337 LSAEIGQLK 345



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 4/134 (2%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L +L LN    L+ LP+ I  LK L  LNL   ++ +  P+       L E+HL   
Sbjct: 137 LKNLRELYLN-TNQLKTLPKEIGQLKNLQQLNLYA-NQLKTLPKEIGQLQNLRELHLSYN 194

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            ++ L A I  L    + +L D + LK+LP  I  L++L+M+  +  ++ K V E +G++
Sbjct: 195 QLKTLSAEIGQLQNLQVLDLNDNQ-LKTLPKEIGQLKNLQMLDLNN-NQFKTVPEEIGQL 252

Query: 800 ESLEVRLSSWNRPK 813
           ++L+V    +N+ K
Sbjct: 253 KNLQVLDLGYNQFK 266



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 48/199 (24%)

Query: 647 CSRLWEEADE-----FPDIVQVLSDGTDIRELSLAIELL------FGLVQ----LTLNGC 691
           CS  + +A+E     + D+ + L +  D+R L L+ + L       G +Q    L LN  
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNN 79

Query: 692 KNLERLPRTISALKYLSTLNLSG--------------------LSKFR--EFPEITSSRD 729
           + L  LP+ I  L+ L  L+LSG                    LSK R    P+      
Sbjct: 80  Q-LATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLK 138

Query: 730 QLLEIHLEGTAIRGLPASIELLSG----NILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
            L E++L    ++ LP  I  L      N+ +N      LK+LP  I  L++LR ++ S 
Sbjct: 139 NLRELYLNTNQLKTLPKEIGQLKNLQQLNLYAN-----QLKTLPKEIGQLQNLRELHLS- 192

Query: 786 CSKLKNVTETLGKVESLEV 804
            ++LK ++  +G++++L+V
Sbjct: 193 YNQLKTLSAEIGQLQNLQV 211


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 19/289 (6%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L    +T +P  +  +T LE L +   K LSS+P  I  L+ L  L+  G + LK  P
Sbjct: 18  LDLSNQDLTSIPEEVFDITDLEFLDVSNNK-LSSIPEAIGRLQKLYRLDADG-NMLKSLP 75

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           Q + S++ L+ LY+    +A +P  IE L  L LL + + + L ++P  +  L SL+ L+
Sbjct: 76  QAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQ-LTKVPPGVCMLPSLEVLD 134

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPAS 186
            S   KL   P  + K++ L EL + G  +      +FL+ NL  L  S       PP  
Sbjct: 135 ASN-NKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSNNKLSTFPPGV 193

Query: 187 ASWH--LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLHSL 243
                   L  N    +  P         GVCSL  L++ +      +A P  ++ L  L
Sbjct: 194 KKLQKLRELRINDNQLTEVP--------PGVCSLPNLEVLNVDNNNLSAFPPGVEKLQKL 245

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           + L +N N    +P+ +  L NLE L + + K L + P     LQ +R 
Sbjct: 246 RGLGINDNQLTEVPSGVCSLPNLEALGVGNNK-LSTFPPGVEKLQKLRV 293



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 37/300 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S++ L+ LY+    +  +P  IE L  L LL++   + L+ +P  +  L  L  L+ S
Sbjct: 78  IGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQ-LTKVPPGVCMLPSLEVLDAS 136

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL  FP  V  ++ L +L +DG  + EVP  + LLP LE+L ++  K L   P  + 
Sbjct: 137 N-NKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSNNK-LSTFPPGVK 194

Query: 121 GLKSLKTLNLS---------GCCKLENV-------------PDTLGKVESLEELDVSGTA 158
            L+ L+ L ++         G C L N+             P  + K++ L  L ++   
Sbjct: 195 KLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKLQKLRGLGINDNQ 254

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTG 214
           +    S +  + NL +L   G N+    PP           ++ G     V       +G
Sbjct: 255 LTEVPSGVCSLPNLEALGV-GNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVP------SG 307

Query: 215 VCSLTKLDLSDCGLGE-AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
           VCSL  L+L   G  + +  P  ++ L  L+EL++N N    +P+ +  L NLE L + +
Sbjct: 308 VCSLPNLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSN 367



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 30/298 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L ++   +TEVP  +  L  LE+L +    NLS+ P  +  L+ LR L ++
Sbjct: 193 VKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDN-NNLSAFPPGVEKLQKLRGLGIN 251

Query: 61  ----------------------GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
                                 G +KL  FP  V  ++ L  L++ G  + EVPS +  L
Sbjct: 252 DNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSL 311

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LELL++ + K L   P  +  L+ L+ L+++   +L  VP  +  + +LE L+VS   
Sbjct: 312 PNLELLHVGKNK-LSTFPPGVEKLQKLRELHIND-NQLTEVPSGVCSLPNLELLNVSNNP 369

Query: 159 IRRPTSSIFLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-V 215
           IRR  + +  +  L++L    C  +E P        L     G+S      M+P   G +
Sbjct: 370 IRRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVGNL 429

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L  L L +  L    +PS +  LH+L+E++L  N F T P  +  L  +E+L++ +
Sbjct: 430 QHLWYLALENNLL--RTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISN 485



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 32/193 (16%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L+++   +TEVPS +  L  LELL +     +  LP  ++ L  L+ L++ 
Sbjct: 331 VEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSN-NPIRRLPNDVTRLTRLKNLDVH 389

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAE----VPSSIELLPGLELLYLNECKNLVR-L 115
            C +  +FP+ V  ++ L KLY  G S+      VP  +  L    L YL    NL+R L
Sbjct: 390 -CCQFDEFPRQVLQLKTLEKLYA-GQSVGRKFDMVPDEVGNLQ--HLWYLALENNLLRTL 445

Query: 116 PSSINGLKSLKTLNL---------SGCCKLE-------------NVPDTLGKVESLEELD 153
           PS+++ L +L+ ++L            C+L               +P  L + + L++LD
Sbjct: 446 PSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLKDLD 505

Query: 154 VSGTAIRRPTSSI 166
           VSG  +  P   +
Sbjct: 506 VSGNPLTYPPQDV 518


>gi|168032881|ref|XP_001768946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679858|gb|EDQ66300.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 549

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 151/322 (46%), Gaps = 16/322 (4%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L    ++ C +L+SLP  + +L  L TL +  CS L   P  + +
Sbjct: 79  SSLTSLPNKLGNLTSLTTFDIRRCSSLTSLPNELGNLTSLTTLNIEWCSSLTSLPNELGN 138

Query: 75  MEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           + DL+   +   +S+  +P+ ++ L  L    +  C +L  LP+    L SL T +LSGC
Sbjct: 139 LTDLTTFNMGRCSSLTSLPNELDNLTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDLSGC 198

Query: 134 CKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNE----PPASAS 188
             L ++P+ LG + SL   D+ G  ++    +    + +L +    GC+     P    +
Sbjct: 199 SSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNEFGNLTSLTTFDIRGCSSLTSLPNELGN 258

Query: 189 WHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                 FN +G+  C     LP+ L  + SLT  D+  C     ++P++  NL SL    
Sbjct: 259 LTSLTTFN-IGR--CSSLTSLPNELGNLTSLTTFDIGRCS-SLTSLPNEFGNLTSLTTFD 314

Query: 248 LN-RNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTLFG 303
           +   ++  +LP  +  L++L   +L     L SLP    N   L  +    CSSL +L  
Sbjct: 315 IQWYSSLTSLPNELGNLMSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPN 374

Query: 304 ALKLCRSKYTI-INCIDSLKLL 324
            L    S  T+ + C  SL LL
Sbjct: 375 ELGNLTSLTTLNMECCSSLTLL 396



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 12/276 (4%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L  L ++ C +L+SLP  + +L  L TL ++ CS L   P  + +
Sbjct: 31  SSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNELGNLISLTTLRMNECSSLTSLPNKLGN 90

Query: 75  MEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+   +   +S+  +P+ +  L  L  L +  C +L  LP+ +  L  L T N+  C
Sbjct: 91  LTSLTTFDIRRCSSLTSLPNELGNLTSLTTLNIEWCSSLTSLPNELGNLTDLTTFNMGRC 150

Query: 134 CKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASAS 188
             L ++P+ L  + SL   D+   +++    +    + +L +   SGC+     P    +
Sbjct: 151 SSLTSLPNELDNLTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDLSGCSSLTSLPNELGN 210

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                 F++ G   C     LP+  G + SLT  D+  C     ++P+++ NL SL    
Sbjct: 211 LTSLTTFDIQG---CLSLTSLPNEFGNLTSLTTFDIRGCS-SLTSLPNELGNLTSLTTFN 266

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           + R ++  +LP  +  L +L   ++  C  L SLP 
Sbjct: 267 IGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPN 302



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 33/295 (11%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L    +  C +L+SLP    +L  L T ++   S L   P  + +
Sbjct: 271 SSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQWYSSLTSLPNELGN 330

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+   L G +S+  +P+ +  L  L  L +  C +L  LP+ +  L SL TLN+  C
Sbjct: 331 LMSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNMECC 390

Query: 134 CKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
             L  +P+ LG + SL  +D+    +    P      + NL SL +        +  W+ 
Sbjct: 391 SSLTLLPNELGNLTSLTIIDIGWCSSLTSLPNE----LDNLTSLTY-------LNIQWYS 439

Query: 192 HLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR 250
            L             + LP+ L  + SLT L++  C     ++P++  NL SL  L +N 
Sbjct: 440 SL-------------ISLPNELDNLTSLTTLNIQWCS-SLTSLPNESGNLISLTTLRMNE 485

Query: 251 -NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
            ++  +LP  +  L +L   +++ C  L SLP    NL  +       CSSL++L
Sbjct: 486 CSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTTLNIEWCSSLISL 540



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 33/272 (12%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIE 96
           C +L+SLP  + +L  L T ++  CS L   P  + ++  L+ L +   +S+  +P+ + 
Sbjct: 6   CSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNELG 65

Query: 97  LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS- 155
            L  L  L +NEC +L  LP+ +  L SL T ++  C  L ++P+ LG + SL  L++  
Sbjct: 66  NLISLTTLRMNECSSLTSLPNKLGNLTSLTTFDIRRCSSLTSLPNELGNLTSLTTLNIEW 125

Query: 156 -GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPS-LT 213
             +    P      + NL  L                   FN +G+  C     LP+ L 
Sbjct: 126 CSSLTSLPNE----LGNLTDLT-----------------TFN-MGR--CSSLTSLPNELD 161

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELE 272
            + SLT  D+  C     ++P++  NL SL    L+  ++  +LP  +  L +L   +++
Sbjct: 162 NLTSLTTFDIGRCS-SLTSLPNEFGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFDIQ 220

Query: 273 DCKRLQSLPQIPPNLQFVRA---NGCSSLVTL 301
            C  L SLP    NL  +      GCSSL +L
Sbjct: 221 GCLSLTSLPNEFGNLTSLTTFDIRGCSSLTSL 252



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 141/306 (46%), Gaps = 18/306 (5%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +  LT L    +  C +L+SLP  + +L  L TL +  CS L   P  + +
Sbjct: 7   SSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNELGN 66

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L ++  +S+  +P+ +  L  L    +  C +L  LP+ +  L SL TLN+  C
Sbjct: 67  LISLTTLRMNECSSLTSLPNKLGNLTSLTTFDIRRCSSLTSLPNELGNLTSLTTLNIEWC 126

Query: 134 CKLENVPDTLGKVESLEELDVS-GTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASAS 188
             L ++P+ LG +  L   ++   +++    + +  + +L +     C+     P    +
Sbjct: 127 SSLTSLPNELGNLTDLTTFNMGRCSSLTSLPNELDNLTSLTTFDIGRCSSLTSLPNEFGN 186

Query: 189 WHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                 F+L G   C     LP+ L  + SLT  D+  C L   ++P++  NL SL    
Sbjct: 187 LTSLTTFDLSG---CSSLTSLPNELGNLTSLTTFDIQGC-LSLTSLPNEFGNLTSLTTFD 242

Query: 248 LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL-- 301
           +   ++  +LP  +  L +L    +  C  L SLP    NL  +       CSSL +L  
Sbjct: 243 IRGCSSLTSLPNELGNLTSLTTFNIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPN 302

Query: 302 -FGALK 306
            FG L 
Sbjct: 303 EFGNLT 308



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ ++ LT L  L ++   +L SLP  + +L  L TL +  CS L   P    +
Sbjct: 415 SSLTSLPNELDNLTSLTYLNIQWYSSLISLPNELDNLTSLTTLNIQWCSSLTSLPNESGN 474

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L ++  +S+  +P+ +  L  L    +  C +L  LP+ +  L SL TLN+  C
Sbjct: 475 LISLTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTTLNIEWC 534

Query: 134 CKLENVPDTLGKV 146
             L ++P  LG +
Sbjct: 535 SSLISLPSELGNL 547



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 16/189 (8%)

Query: 632 GRQTVRRQSPQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSLA 676
           GR +     P E GN           CS L    +E  +++ +    +++ + +  L   
Sbjct: 28  GRCSSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNELGNLISLTTLRMNECSSLTSLPNK 87

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           +  L  L    +  C +L  LP  +  L  L+TLN+   S     P    +   L   ++
Sbjct: 88  LGNLTSLTTFDIRRCSSLTSLPNELGNLTSLTTLNIEWCSSLTSLPNELGNLTDLTTFNM 147

Query: 737 -EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
              +++  LP  ++ L+     ++  C +L SLP+    L SL     SGCS L ++   
Sbjct: 148 GRCSSLTSLPNELDNLTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDLSGCSSLTSLPNE 207

Query: 796 LGKVESLEV 804
           LG + SL  
Sbjct: 208 LGNLTSLTT 216



 Score = 43.1 bits (100), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 21/190 (11%)

Query: 636 VRRQS-----PQEPGN-----------CSRLWEEADEFPDIVQV----LSDGTDIRELSL 675
           +RR S     P E GN           CS L    +E  ++  +    +   + +  L  
Sbjct: 99  IRRCSSLTSLPNELGNLTSLTTLNIEWCSSLTSLPNELGNLTDLTTFNMGRCSSLTSLPN 158

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
            ++ L  L    +  C +L  LP     L  L+T +LSG S     P    +   L    
Sbjct: 159 ELDNLTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDLSGCSSLTSLPNELGNLTSLTTFD 218

Query: 736 LEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           ++G  ++  LP     L+     +++ C +L SLP+ +  L SL       CS L ++  
Sbjct: 219 IQGCLSLTSLPNEFGNLTSLTTFDIRGCSSLTSLPNELGNLTSLTTFNIGRCSSLTSLPN 278

Query: 795 TLGKVESLEV 804
            LG + SL  
Sbjct: 279 ELGNLTSLTT 288



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 9/172 (5%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIEL------LFGLVQLTLNGCKNLERLP 698
           G CS L    +E  ++  + +   DI   S    L      L  L    L+GC +L  LP
Sbjct: 148 GRCSSLTSLPNELDNLTSLTTF--DIGRCSSLTSLPNEFGNLTSLTTFDLSGCSSLTSLP 205

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
             +  L  L+T ++ G       P    +   L    + G +++  LP  +  L+     
Sbjct: 206 NELGNLTSLTTFDIQGCLSLTSLPNEFGNLTSLTTFDIRGCSSLTSLPNELGNLTSLTTF 265

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSW 809
           N+  C +L SLP+ +  L SL       CS L ++    G + SL      W
Sbjct: 266 NIGRCSSLTSLPNELGNLTSLTTFDIGRCSSLTSLPNEFGNLTSLTTFDIQW 317


>gi|429961316|gb|ELA40861.1| hypothetical protein VICG_02102 [Vittaforma corneae ATCC 50505]
          Length = 418

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 154/326 (47%), Gaps = 59/326 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +KDL  LYL+G  +  +P  I  L  L+ L L+  K L  LP+ I  LK L+ L+L+
Sbjct: 86  IGELKDLKMLYLNGNELGTLPPEIRRLEKLQCLYLRNNK-LKLLPIEIGELKNLQALDLN 144

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL------------NE 108
           G +KL+  P  +  +E+L  L L+G  +  +P  I  L  L  L L             +
Sbjct: 145 G-NKLETLPAEIGELENLQYLDLNGNELETLPLEIGELKNLRYLNLGNNKLGILSTVIKK 203

Query: 109 CKNLV----------RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
            KNL            LPS I  L+ L+ L L G  KL+ +P  +  +E+L+ELD++G  
Sbjct: 204 LKNLEILCLSNNEFELLPSEIVELEKLQCLYLHGN-KLKLLPIEIEGLENLQELDLNGNE 262

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           +    + I+ +KNL++L F                 +N L   + PV         +  L
Sbjct: 263 LETLPAVIWKLKNLKTLRFG----------------YNKL--ETLPVE--------IVEL 296

Query: 219 TKLD-LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC-KR 276
            KL  L   G     +P +I+ L +L+EL LN N   TLP  I  L NL+ L L  C  +
Sbjct: 297 EKLQFLYLHGNKLKLLPIEIEGLENLQELDLNGNELETLPLEIGELKNLKTLRL--CYNK 354

Query: 277 LQSLP----QIPPNLQFVRANGCSSL 298
           L++LP    ++  +LQF+   G + L
Sbjct: 355 LETLPVEIGELSGSLQFLDLRGNNIL 380



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 33/266 (12%)

Query: 39  KNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           + ++S+   I  L  L  L+LS  + L+  P  +  ++DL  LYL+G  +  +P  I  L
Sbjct: 54  QGITSIDSDIKRLVKLEKLDLS-VNNLETLPPEIGELKDLKMLYLNGNELGTLPPEIRRL 112

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L+ LYL   K L  LP  I  LK+L+ L+L+G  KLE +P  +G++E+L+ LD++G  
Sbjct: 113 EKLQCLYLRNNK-LKLLPIEIGELKNLQALDLNGN-KLETLPAEIGELENLQYLDLNGNE 170

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           +      I  +KNLR                +L+L  N LG  S  +   L +L  +C  
Sbjct: 171 LETLPLEIGELKNLR----------------YLNLGNNKLGILSTVIK-KLKNLEILC-- 211

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
               LS+       +PS+I  L  L+ LYL+ N    LP  I GL NL+EL+L +   L+
Sbjct: 212 ----LSNNEF--ELLPSEIVELEKLQCLYLHGNKLKLLPIEIEGLENLQELDL-NGNELE 264

Query: 279 SLPQIP---PNLQFVRANGCSSLVTL 301
           +LP +     NL+ +R  G + L TL
Sbjct: 265 TLPAVIWKLKNLKTLRF-GYNKLETL 289


>gi|15238999|ref|NP_196686.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8953387|emb|CAB96660.1| RPP1 disease resistance protein-like [Arabidopsis thaliana]
 gi|332004269|gb|AED91652.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1189

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 178/401 (44%), Gaps = 61/401 (15%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L DL L+G +S+ E+PS  + +  L+ L L+ C NL  LP +I +   LR L+L  CS 
Sbjct: 724  NLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRYCSNLVELPSSIGNAINLRELDLYYCSS 782

Query: 65   LKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            L + P  + +  +L  L L+G S + E+PSSI     L+ L L  C  L+ LPSSI    
Sbjct: 783  LIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAI 842

Query: 124  SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCN 181
            +L+ L L  C  L  +P ++G   +L  +++S  +  +  P  SI  ++ L+ L   GC+
Sbjct: 843  NLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNLVELPL-SIGNLQKLQELILKGCS 901

Query: 182  EPPASASWHLHLPFN-------LLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
            +          LP N       +L  + C +    P ++       L    CG     +P
Sbjct: 902  KLE-------DLPININLESLDILVLNDCSMLKRFPEISTNVRALYL----CGTAIEEVP 950

Query: 235  SDIDNLHSLKELYLNR-NNFVTLPASISGLLN--------------------LEELELED 273
              I +   L EL ++  +N V  P  +  + N                    L+ L L+ 
Sbjct: 951  LSIRSWPRLDELLMSYFDNLVEFPHVLDIITNLDLSGKEIQEVPPLIKRISRLQTLILKG 1010

Query: 274  CKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISM 333
             +++ SLPQIP +L+++ A  C SL  L  +            C       + N  A  +
Sbjct: 1011 YRKVVSLPQIPDSLKWIDAEDCESLERLDCSFHNPEITLFFGKC------FKLNQEARDL 1064

Query: 334  LREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
            + +    QA          V PG ++P +F ++  G S+T+
Sbjct: 1065 IIQTPTKQA----------VLPGREVPAYFTHRASGGSLTI 1095



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 11/288 (3%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +L L  + +  +   ++ L  L  + L    NL  LP  +S+   LR L LS CS L 
Sbjct: 655 LIELNLTHSKLDMLWEGVKPLHNLRQMDLSYSVNLKELP-DLSTAINLRKLILSNCSSLI 713

Query: 67  KFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
           K P  + +  +L  L L+G +S+ E+PS  + +  L+ L L  C NLV LPSSI    +L
Sbjct: 714 KLPSCIGNAINLEDLDLNGCSSLVELPSFGDAI-NLQKLLLRYCSNLVELPSSIGNAINL 772

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCN--- 181
           + L+L  C  L  +P ++G   +L  LD++G + +    SSI    NL+ L    C    
Sbjct: 773 RELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLL 832

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLH 241
           E P+S    ++L  NLL      +  +  S+    +L  ++LS+C      +P  I NL 
Sbjct: 833 ELPSSIGNAINLQ-NLLLDDCSSLLELPSSIGNATNLVYMNLSNCS-NLVELPLSIGNLQ 890

Query: 242 SLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            L+EL L   +    LP +I+ L +L+ L L DC  L+  P+I  N++
Sbjct: 891 KLQELILKGCSKLEDLPININ-LESLDILVLNDCSMLKRFPEISTNVR 937



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 2/123 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+ L LNGC NL  LP +I     L  L+L   +K  E P    +   L  + L+  +  
Sbjct: 796 LLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSL 855

Query: 743 G-LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP+SI   +  +  NL +C NL  LP +I  L+ L+ +   GCSKL+++   +  +ES
Sbjct: 856 LELPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-LES 914

Query: 802 LEV 804
           L++
Sbjct: 915 LDI 917



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 14/161 (8%)

Query: 650 LWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           LWE      ++ Q+ LS   +++EL   +     L +L L+ C +L +LP  I     L 
Sbjct: 668 LWEGVKPLHNLRQMDLSYSVNLKELP-DLSTAINLRKLILSNCSSLIKLPSCIGNAINLE 726

Query: 709 TLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS--GNILS----NLKDC 762
            L+L+G S   E P    +      I+L+   +R     +EL S  GN ++    +L  C
Sbjct: 727 DLDLNGCSSLVELPSFGDA------INLQKLLLRYCSNLVELPSSIGNAINLRELDLYYC 780

Query: 763 KNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            +L  LPS+I    +L ++  +GCS L  +  ++G   +L+
Sbjct: 781 SSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQ 821



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 4/143 (2%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           +LS+ + + +L   I     L  L LNGC +L  LP    A+  L  L L   S   E P
Sbjct: 705 ILSNCSSLIKLPSCIGNAINLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRYCSNLVELP 763

Query: 723 EITSSRDQLLEIHLE--GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
               +   L E+ L    + IR LP+SI      ++ +L  C NL  LPS+I    +L+ 
Sbjct: 764 SSIGNAINLRELDLYYCSSLIR-LPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQK 822

Query: 781 MYPSGCSKLKNVTETLGKVESLE 803
           +    C+KL  +  ++G   +L+
Sbjct: 823 LDLRRCAKLLELPSSIGNAINLQ 845


>gi|190688737|gb|ACE86400.1| rp3-like disease resistance protein [Sorghum bicolor]
          Length = 1294

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 118/245 (48%), Gaps = 18/245 (7%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L +   S T VP +I     L+ L    CK   +LP ++ +L+ LRTLEL   + L+
Sbjct: 643 LGYLEIHNVSCTTVPEAISRFWNLQSLNFVDCKGFVTLPESVGTLRKLRTLELRWVTDLE 702

Query: 67  KFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSING-LKS 124
             PQ +     L  L L   S + E+PSS+  +  L +L +  C +L +LPS I G  K+
Sbjct: 703 SLPQSIGDCYVLQSLQLYACSKLREIPSSLGRIGNLCVLDIEYCSSLQQLPSDIIGEFKN 762

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE-- 182
           L+T+N  GC  L+++P TL    +L  L++S T +      +  +  L  +   GCNE  
Sbjct: 763 LRTINFHGCTDLQDLPSTLS-CPTLRTLNLSETKVTMLPQWVTSIDTLECINLEGCNELR 821

Query: 183 --PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-----LSDCGLGEAAIPS 235
             P   A+       N+     C     LP  TG+  LT+L      +  CG  +A I S
Sbjct: 822 ELPKGIANLKRLAVLNI---KHCSKLCCLP--TGLGQLTRLRELGLFVVGCGADDARI-S 875

Query: 236 DIDNL 240
           +++NL
Sbjct: 876 ELENL 880



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 109/267 (40%), Gaps = 53/267 (19%)

Query: 42  SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL 101
           +S   T+ S  C+R++ L   +        +   E L  L +   S   VP +I     L
Sbjct: 608 TSFDTTVKSSCCMRSVVLDYATD-TPLSLFILKFEYLGYLEIHNVSCTTVPEAISRFWNL 666

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLS------------------------GCCKLE 137
           + L   +CK  V LP S+  L+ L+TL L                          C KL 
Sbjct: 667 QSLNFVDCKGFVTLPESVGTLRKLRTLELRWVTDLESLPQSIGDCYVLQSLQLYACSKLR 726

Query: 138 NVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            +P +LG++ +L  LD+    +  + P+  I   KNLR++ F GC +          LP 
Sbjct: 727 EIPSSLGRIGNLCVLDIEYCSSLQQLPSDIIGEFKNLRTINFHGCTDLQ-------DLPS 779

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFV 254
            L    SCP            +L  L+LS+  +    +P  + ++ +L+ + L   N   
Sbjct: 780 TL----SCP------------TLRTLNLSETKV--TMLPQWVTSIDTLECINLEGCNELR 821

Query: 255 TLPASISGLLNLEELELEDCKRLQSLP 281
            LP  I+ L  L  L ++ C +L  LP
Sbjct: 822 ELPKGIANLKRLAVLNIKHCSKLCCLP 848



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  +  +GC +L+ LP T+S    L TLNLS  +K    P+  +S D L  I+LEG   +
Sbjct: 763 LRTINFHGCTDLQDLPSTLSC-PTLRTLNLSE-TKVTMLPQWVTSIDTLECINLEGCNEL 820

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM--MYPSGC-------SKLKNV 792
           R LP  I  L    + N+K C  L  LP+ +  L  LR   ++  GC       S+L+N+
Sbjct: 821 RELPKGIANLKRLAVLNIKHCSKLCCLPTGLGQLTRLRELGLFVVGCGADDARISELENL 880

Query: 793 TETLGKVE 800
               G++E
Sbjct: 881 DMIGGRLE 888



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           AI   + L  L    CK    LP ++  L+ L TL L  ++     P+       L  + 
Sbjct: 659 AISRFWNLQSLNFVDCKGFVTLPESVGTLRKLRTLELRWVTDLESLPQSIGDCYVLQSLQ 718

Query: 736 LEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING-LRSLRMMYPSGCSKLKNVT 793
           L   + +R +P+S+  +    + +++ C +L+ LPS I G  ++LR +   GC+ L+++ 
Sbjct: 719 LYACSKLREIPSSLGRIGNLCVLDIEYCSSLQQLPSDIIGEFKNLRTINFHGCTDLQDLP 778

Query: 794 ETL 796
            TL
Sbjct: 779 STL 781



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 2/136 (1%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPR-TISALKYLSTLNLSGLSKFREFPEITS 726
           + +RE+  ++  +  L  L +  C +L++LP   I   K L T+N  G +  ++ P  T 
Sbjct: 723 SKLREIPSSLGRIGNLCVLDIEYCSSLQQLPSDIIGEFKNLRTINFHGCTDLQDLPS-TL 781

Query: 727 SRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           S   L  ++L  T +  LP  +  +      NL+ C  L+ LP  I  L+ L ++    C
Sbjct: 782 SCPTLRTLNLSETKVTMLPQWVTSIDTLECINLEGCNELRELPKGIANLKRLAVLNIKHC 841

Query: 787 SKLKNVTETLGKVESL 802
           SKL  +   LG++  L
Sbjct: 842 SKLCCLPTGLGQLTRL 857



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 127/315 (40%), Gaps = 45/315 (14%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L  L L  T +T +P  +  +  LE + L+GC  L  LP  I++LK L  L +  CSKL 
Sbjct: 786  LRTLNLSETKVTMLPQWVTSIDTLECINLEGCNELRELPKGIANLKRLAVLNIKHCSKLC 845

Query: 67   KFPQIVASMEDLSKLYL-------DGTSIAEVPSSIELLPG-LELLYLNECKN------- 111
              P  +  +  L +L L       D   I+E+  +++++ G LE+  L   K+       
Sbjct: 846  CLPTGLGQLTRLRELGLFVVGCGADDARISEL-ENLDMIGGRLEITNLKYLKDPSDAEKA 904

Query: 112  LVRLPSSINGLK---SLKTLNLSGCCKLENVPDTLGKVE---SLEELDVSGTAIRRPTSS 165
             ++  S I  L+   SL          +E+    L  +E    +E LD+     R P   
Sbjct: 905  CLKRKSHIQNLELNWSLSDSEEELVSDMEHDWGVLNALEPPSQIESLDIYN--YRGPCLP 962

Query: 166  IFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD 225
             ++MK   S YF G      + + H  L    L     P    +     + SL  L L++
Sbjct: 963  GWMMKQNDSSYFEGGIMLKQTIASHF-LCLTWLTVKRFPNLRHMRGFVELPSLKYLVLAE 1021

Query: 226  CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG---LLNLEELELEDCKRLQSLPQ 282
                          + +L+EL+   + F T    ++       L  LE+  C +L   P 
Sbjct: 1022 --------------MPNLEELWTTSSGFETGEKELAAQHLFPVLSSLEIYGCPKLNVSPY 1067

Query: 283  IPPNLQFV---RANG 294
             PP+L  +   R NG
Sbjct: 1068 FPPSLVHMSLNRING 1082



 Score = 39.3 bits (90), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 32/208 (15%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA------EVPSSIELLP-------- 99
            L +LE+ GC KL   P    S+  +S   ++G  ++      ++PS   L+P        
Sbjct: 1051 LSSLEIYGCPKLNVSPYFPPSLVHMSLNRINGQLLSTGRFSHQLPSMHALVPRLKSLGLS 1110

Query: 100  -------GLELL-YLNE--------CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
                   G ELL +L E        C +L +LP S+  L SL+ L +  C  +  + D L
Sbjct: 1111 NVTGSPSGWELLQHLTELKELCIYRCNDLTQLPESMRKLTSLERLRIYECPAVGTLSDWL 1170

Query: 144  GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSC 203
            G++ SL  L +    +++   +I  + +L  L  S     P      L    +L  K S 
Sbjct: 1171 GELHSLRHLGLGLGDLKQFPEAIQHLTSLEHLELSSLTVLPEWIG-QLSALRSLYIKHSP 1229

Query: 204  PVALMLPSLTGVCSLTKLDLSDC-GLGE 230
             +  +  S+  + +L +L +  C GL E
Sbjct: 1230 ALQYLPQSIQRLTALEELRIYGCPGLAE 1257


>gi|357506067|ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1204

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 128/289 (44%), Gaps = 41/289 (14%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +L L G+S+ ++ + I+ +  L+ + L   KNL   P     ++ L  L+ +GC    
Sbjct: 579 LVELNLPGSSVEQLWTDIQQMPYLKRMDLSNSKNLKMTPC-FKGMQNLERLDFAGC---- 633

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP-SSINGLKSL 125
                               S+  V  SI LL  L+ L L  C +LV      ++   SL
Sbjct: 634 -------------------ISLWHVHPSIGLLRELQFLSLQNCTSLVCFEFGRVSESSSL 674

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE-- 182
           + L LSGC KLEN PD   K+ +LE LD+   T++ +   SI  +  LR L   GC    
Sbjct: 675 RVLCLSGCTKLENTPD-FEKLLNLEYLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNLV 733

Query: 183 --PPASASWHLHLPFNLLGKSSCPVALMLP-----SLTGVCSLTKLDLSDCGLGEAAIPS 235
             P +  +    +  +L G   C     LP     S     SL  LDLS C +  + +P 
Sbjct: 734 IIPDSFNNMTNLMTLDLCG---CSRFTNLPLGSVSSFHTQQSLISLDLSFCNI--SIVPD 788

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
            I  L  L+ L L  NNF  LP +I  L +L  L L  C RLQ  P IP
Sbjct: 789 AIGELRGLERLNLQGNNFTELPCTIQRLSSLAYLNLSHCHRLQIWPLIP 837



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 22/187 (11%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSL-AIELLFGLVQLTLNG 690
           G++ VR + P EPG  SRLW   D F  ++       + + + L   E  F   +L    
Sbjct: 471 GKKIVRGEHPDEPGFWSRLWLYRD-FHHVMMTQKKAIEAKAIVLNQKEDDFKFNELRAED 529

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKF----------REFPEITSSRD----QLLEIHL 736
              LE L   I     L+  N SG   F           ++P I+   +     L+E++L
Sbjct: 530 LSKLEHLKLLI-----LNHKNFSGRPSFLSNSLRYLLWNDYPFISLPSNFQPYHLVELNL 584

Query: 737 EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            G+++  L   I+ +      +L + KNLK  P    G+++L  +  +GC  L +V  ++
Sbjct: 585 PGSSVEQLWTDIQQMPYLKRMDLSNSKNLKMTP-CFKGMQNLERLDFAGCISLWHVHPSI 643

Query: 797 GKVESLE 803
           G +  L+
Sbjct: 644 GLLRELQ 650



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP--EIT 725
           T + ++  +I  L  L  L+L GC NL  +P + + +  L TL+L G S+F   P   ++
Sbjct: 706 TSLYKIDKSIGDLTKLRFLSLRGCTNLVIIPDSFNNMTNLMTLDLCGCSRFTNLPLGSVS 765

Query: 726 SSRDQ--LLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           S   Q  L+ + L    I  +P +I  L G    NL+   N   LP TI  L SL  +  
Sbjct: 766 SFHTQQSLISLDLSFCNISIVPDAIGELRGLERLNLQG-NNFTELPCTIQRLSSLAYLNL 824

Query: 784 SGCSKLK 790
           S C +L+
Sbjct: 825 SHCHRLQ 831



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           + + L  L L   +I+ VP +I  L GLE L L+G  N + LP TI  L  L  L LS C
Sbjct: 769 TQQSLISLDLSFCNISIVPDAIGELRGLERLNLQG-NNFTELPCTIQRLSSLAYLNLSHC 827

Query: 63  SKLKKFPQI 71
            +L+ +P I
Sbjct: 828 HRLQIWPLI 836


>gi|402479186|gb|AFQ55835.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 23/166 (13%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + +VP S+  L  L  L L+ C NLS   V +S LK L  L LSGCS L   P+ + +M 
Sbjct: 11  LVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMP 70

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
            L +L LDGT+I  +P SI  L  LE L L  C++                       L 
Sbjct: 71  CLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDGTGLQ 130

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            LP+SI  LKSL+ L+L  C  L  +PDT+ +++SL+EL ++G+A+
Sbjct: 131 TLPNSIGYLKSLQKLHLMHCASLSKIPDTINELKSLKELFLNGSAM 176



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 49/230 (21%)

Query: 31  ELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IA 89
           E L L+ C  L  +P ++ +LK L  L+L  CS L KF   V+ ++ L KL+L G S ++
Sbjct: 1   EKLVLERCNLLVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLS 60

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            +P +I  +P L+ L L+    +  LP SI  L++L+ L+L GC  ++ +P  +G + SL
Sbjct: 61  VLPENIGAMPCLKELLLDGTA-IKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSL 119

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           EEL + GT ++   +SI  +K+L+ L+   C                             
Sbjct: 120 EELYLDGTGLQTLPNSIGYLKSLQKLHLMHC----------------------------- 150

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                  SL+K            IP  I+ L SLKEL+LN +    LP S
Sbjct: 151 ------ASLSK------------IPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 25/144 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L +L LDGT+I  +P SI  L  LE L+LKGC+++  LP+ I +L         
Sbjct: 66  IGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLT-------- 117

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
                            L +LYLDGT +  +P+SI  L  L+ L+L  C +L ++P +IN
Sbjct: 118 ----------------SLEELYLDGTGLQTLPNSIGYLKSLQKLHLMHCASLSKIPDTIN 161

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG 144
            LKSLK L L+G   +E +P + G
Sbjct: 162 ELKSLKELFLNGSA-MEELPLSTG 184



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L  C NL +    +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 24  LLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCLKELLLDGTAIK 83

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +LK C+++K LP  I  L SL  +Y  G + L+ +  ++G ++SL
Sbjct: 84  NLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDG-TGLQTLPNSIGYLKSL 142

Query: 803 E 803
           +
Sbjct: 143 Q 143



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 24/140 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S L E     P + ++L DGT I+ L  +I  L  L +L+L GC++++ LP  I  L 
Sbjct: 58  NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLT 117

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L                         E++L+GT ++ LP SI  L      +L  C +L
Sbjct: 118 SLE------------------------ELYLDGTGLQTLPNSIGYLKSLQKLHLMHCASL 153

Query: 766 KSLPSTINGLRSLRMMYPSG 785
             +P TIN L+SL+ ++ +G
Sbjct: 154 SKIPDTINELKSLKELFLNG 173



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           L  ++G+  L KL LS C    + +P +I  +  LKEL L+      LP SI  L NLE+
Sbjct: 39  LVDVSGLKRLEKLFLSGCS-NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLEK 97

Query: 269 LELEDCKRLQSLP 281
           L L+ C+ ++ LP
Sbjct: 98  LSLKGCRSIKELP 110


>gi|402479150|gb|AFQ55817.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479152|gb|AFQ55818.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479154|gb|AFQ55819.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479156|gb|AFQ55820.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479160|gb|AFQ55822.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479162|gb|AFQ55823.1| disease resistance protein, partial [Capsella rubella]
 gi|402479164|gb|AFQ55824.1| disease resistance protein, partial [Capsella rubella]
 gi|402479166|gb|AFQ55825.1| disease resistance protein, partial [Capsella rubella]
 gi|402479168|gb|AFQ55826.1| disease resistance protein, partial [Capsella rubella]
 gi|402479170|gb|AFQ55827.1| disease resistance protein, partial [Capsella rubella]
 gi|402479172|gb|AFQ55828.1| disease resistance protein, partial [Capsella rubella]
 gi|402479174|gb|AFQ55829.1| disease resistance protein, partial [Capsella rubella]
 gi|402479176|gb|AFQ55830.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479178|gb|AFQ55831.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479180|gb|AFQ55832.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479182|gb|AFQ55833.1| disease resistance protein, partial [Capsella grandiflora]
 gi|402479184|gb|AFQ55834.1| disease resistance protein, partial [Capsella grandiflora]
          Length = 184

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 23/166 (13%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           + +VP S+  L  L  L L+ C NLS   V +S LK L  L LSGCS L   P+ + +M 
Sbjct: 11  LVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMP 70

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-----------------------LV 113
            L +L LDGT+I  +P SI  L  LE L L  C++                       L 
Sbjct: 71  CLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDGTGLQ 130

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            LP+SI  LKSL+ L+L  C  L  +PDT+ +++SL+EL ++G+A+
Sbjct: 131 TLPNSIGYLKSLQKLHLMHCASLSKIPDTINELKSLKELFLNGSAM 176



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 49/230 (21%)

Query: 31  ELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IA 89
           E L L+ C  L  +P ++ +LK L  L+L  CS L KF   V+ ++ L KL+L G S ++
Sbjct: 1   EKLVLERCNLLVKVPRSVGNLKTLLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLS 60

Query: 90  EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
            +P +I  +P L+ L L+    +  LP SI  L++L+ L+L GC  ++ +P  +G + SL
Sbjct: 61  VLPENIGAMPCLKELLLDGTA-IKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSL 119

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           EEL + GT ++   +SI  +K+L+ L+   C                             
Sbjct: 120 EELYLDGTGLQTLPNSIGYLKSLQKLHLMHC----------------------------- 150

Query: 210 PSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                  SL+K            IP  I+ L SLKEL+LN +    LP S
Sbjct: 151 ------ASLSK------------IPDTINELKSLKELFLNGSAMEELPLS 182



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 25/144 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +M  L +L LDGT+I  +P SI  L  LE L+LKGC+++  LP+ I +L         
Sbjct: 66  IGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLT-------- 117

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
                            L +LYLDGT +  +P+SI  L  L+ L+L  C +L ++P +IN
Sbjct: 118 ----------------SLEELYLDGTGLQTLPNSIGYLKSLQKLHLMHCASLSKIPDTIN 161

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG 144
            LKSLK L L+G   +E +P + G
Sbjct: 162 ELKSLKELFLNGSA-MEELPLSPG 184



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L+QL L  C NL +    +S LK L  L LSG S     PE   +   L E+ L+GTAI+
Sbjct: 24  LLQLDLRNCSNLSKFLVDVSGLKRLEKLFLSGCSNLSVLPENIGAMPCLKELLLDGTAIK 83

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP SI  L      +LK C+++K LP  I  L SL  +Y  G + L+ +  ++G ++SL
Sbjct: 84  NLPESIYRLENLEKLSLKGCRSIKELPLCIGTLTSLEELYLDG-TGLQTLPNSIGYLKSL 142

Query: 803 E 803
           +
Sbjct: 143 Q 143



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 24/140 (17%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALK 705
           N S L E     P + ++L DGT I+ L  +I  L  L +L+L GC++++ LP  I  L 
Sbjct: 58  NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLEKLSLKGCRSIKELPLCIGTLT 117

Query: 706 YLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNL 765
            L                         E++L+GT ++ LP SI  L      +L  C +L
Sbjct: 118 SLE------------------------ELYLDGTGLQTLPNSIGYLKSLQKLHLMHCASL 153

Query: 766 KSLPSTINGLRSLRMMYPSG 785
             +P TIN L+SL+ ++ +G
Sbjct: 154 SKIPDTINELKSLKELFLNG 173



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)

Query: 209 LPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           L  ++G+  L KL LS C    + +P +I  +  LKEL L+      LP SI  L NLE+
Sbjct: 39  LVDVSGLKRLEKLFLSGCS-NLSVLPENIGAMPCLKELLLDGTAIKNLPESIYRLENLEK 97

Query: 269 LELEDCKRLQSLP 281
           L L+ C+ ++ LP
Sbjct: 98  LSLKGCRSIKELP 110


>gi|356533779|ref|XP_003535437.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 983

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 172/397 (43%), Gaps = 65/397 (16%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K L ++ +  + +TE+   ++ L  L  + L  CK+L ++P  +S    L+ + LSGC  
Sbjct: 603 KMLVEICMPHSHVTELWQGVQDLANLVRIDLSECKHLKNVP-DLSKASKLKWVNLSGCES 661

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L      V S++ L    LDG                       CKN+  L S    L+S
Sbjct: 662 LCDIHPSVFSLDTLETSTLDG-----------------------CKNVKSLKSE-KHLRS 697

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           LK +++ GC  L+   +     +S++ LD+S T I    SSI  +  LRSL   G     
Sbjct: 698 LKEISVIGCTSLK---EFWVSSDSIKGLDLSSTGIEMLDSSIGRLTKLRSLNVEGLR--- 751

Query: 185 ASASWHLHLPFNL--------LGKSSCPVALMLPSL----TGVCSLTKLDLSD-CGLGEA 231
                H +LP  L        L   +C +A+    L     G  SL  L L D C L E 
Sbjct: 752 -----HGNLPNELFSLKCLRELRICNCRLAIDKEKLHVLFDGSRSLRVLHLKDCCNLSE- 805

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN-LQFV 290
            +P +I  L  L EL L+ +   TLP +I  L  L  L L++C+ L+SLP++PPN L+F+
Sbjct: 806 -LPENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLNTLSLKNCRMLESLPKLPPNVLEFI 864

Query: 291 RANGCSSLVTL----FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDP 346
            A  C SL T+         L   K  I++  +   LL    L   M   +L  +++   
Sbjct: 865 -ATNCRSLRTVSISTLADFALRTGKGIIVSLQNCSNLLESPSLHCIMEDAHLATKSIVLK 923

Query: 347 GHKLSIVFPGSQ--------IPKWFMYQNEGSSITVT 375
              L  +F G+         + + F YQ    S+ + 
Sbjct: 924 NMFLKELFRGTNTRIDNYDYVKRQFKYQTTPYSLVIV 960


>gi|357513713|ref|XP_003627145.1| NBS resistance protein [Medicago truncatula]
 gi|355521167|gb|AET01621.1| NBS resistance protein [Medicago truncatula]
          Length = 1108

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 219/522 (41%), Gaps = 83/522 (15%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L ++ L  + +  +   I+ L  LE + L  CK L  LP  +S    L+ L LSGC    
Sbjct: 605  LVEIRLPHSHVEHLWYGIQELVNLEGIDLTECKQLVELP-DLSKATRLKWLFLSGCE--- 660

Query: 67   KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                                S++EV  S      L  L L+ CK L  L      L SLK
Sbjct: 661  --------------------SLSEVHPSTFHNDTLVTLLLDRCKKLENLVCE-KHLTSLK 699

Query: 127  TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEPP 184
             ++++GC  L  +  +L   +S+E LD+S T ++    SI  M N   L   G      P
Sbjct: 700  NIDVNGCSSL--IEFSLSS-DSIEGLDLSNTMVKTLHPSIGRMSNFSWLNLQGLRLQNVP 756

Query: 185  ASASWHLHLPFNLLGKSSCPVAL------MLPSLTGVCSLTK-LDLSD-CGLGEAAIPSD 236
               S HL      L  S+C V        +     G+ SL K L L D C L E  +P++
Sbjct: 757  KELS-HLR-SLTQLWISNCSVVTKSKLEEIFECHNGLESLLKTLVLKDCCNLFE--LPTN 812

Query: 237  IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
            ID+L  L EL L+ +N   LP +I  L NL  L L +CK L SLPQ+P +++ +RA  C+
Sbjct: 813  IDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKMLVSLPQLPEHIKELRAENCT 872

Query: 297  SLVTL--FGALKLCRSKYTIINCIDSLKLLRKNGLAISMLRE--YLELQAV--------- 343
            SLV +     +   R+         + K+L  N L+++ + E   L +++V         
Sbjct: 873  SLVEVSTLKTMSKHRNGDEKYISFKNGKMLESNELSLNRITEDTILVIKSVALYNVLVDK 932

Query: 344  ------SDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQV 397
                  S     + +  PGS+IP    Y+   S +T+      Y+    +GF    +F V
Sbjct: 933  RCSEIHSYNYDSVVVCLPGSRIPSQLKYKTSDSKLTIGFSDIYYS----LGF----IFAV 984

Query: 398  PKHSTGTYLFHSYPAHELECSM---DGSGEGHYIYFRGK-FGHVVSDHLWLLFLP-RHG- 451
                +           +++C     DGS  G    +  +   ++  DH+++ + P R G 
Sbjct: 985  VVSPSSGMKNERGSGAKIQCKCYREDGSQVGVSSEWHNEVITNLDMDHVFVWYDPYRIGI 1044

Query: 452  ------HNWQFESNLIRLSFRSISDPTWKVKRCGFHPIYMHE 487
                   N  FE N+   S     D    VK CG  PIY  E
Sbjct: 1045 IQYISEGNVSFEFNVTNDS--EEQDCFLSVKGCGICPIYTSE 1084



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 31/136 (22%)

Query: 1   MASMKDLSDLYLDGTSI---TEVPSSIELLTGLE----LLTLKGCKNLSSLPVTISSLKC 53
           ++ ++ L+ L++   S+   +++    E   GLE     L LK C NL  LP  I SL  
Sbjct: 759 LSHLRSLTQLWISNCSVVTKSKLEEIFECHNGLESLLKTLVLKDCCNLFELPTNIDSLSF 818

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           L  L                         LDG+++  +P++I+ L  L +L LN CK LV
Sbjct: 819 LYELR------------------------LDGSNVKMLPTNIKYLSNLTILSLNNCKMLV 854

Query: 114 RLPSSINGLKSLKTLN 129
            LP     +K L+  N
Sbjct: 855 SLPQLPEHIKELRAEN 870



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLK 766
           L TL L       E P    S   L E+ L+G+ ++ LP +I+ LS   + +L +CK L 
Sbjct: 795 LKTLVLKDCCNLFELPTNIDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKMLV 854

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVT--ETLGKVESLEVRLSSWNRPKM 814
           SLP     ++ LR      C+ L  V+  +T+ K  + + +  S+   KM
Sbjct: 855 SLPQLPEHIKELR---AENCTSLVEVSTLKTMSKHRNGDEKYISFKNGKM 901


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 143/305 (46%), Gaps = 49/305 (16%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L DL+LD   +T +P SI  L  L +L L                         
Sbjct: 111 IGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNL------------------------- 145

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-LVRLPSSI 119
           G + L + P+ ++ +++L  LYL+   +A +P SI LL  L+  YL+   N L  +P  I
Sbjct: 146 GHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQ--YLDAQSNRLQSIPEEI 203

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY--- 176
             LK+LK L++ G   L  VP+++G++E L+EL +S   +    +SI  +K L+ LY   
Sbjct: 204 GQLKNLKYLSVDG-NHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLY 262

Query: 177 --FSGCNEPPASASWHLHLPFNLLGK--SSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
              +G   PP           NL     ++ P+A     +T +  L  L L    L   +
Sbjct: 263 NKLTGL--PPGFGKLQHLKDINLSHNRITTFPIA-----ITKLTQLKSLALDSNQL--TS 313

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQF 289
           +P+++ NL  L+ L LN N  + LP SI  L NL  L L + K L  +P   Q  PNL++
Sbjct: 314 LPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLINNK-LTDVPIEIQNLPNLEY 372

Query: 290 VRANG 294
           +   G
Sbjct: 373 LVLEG 377



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 133/282 (47%), Gaps = 55/282 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L +L+L+   +T++P SI  L  LE L L   + L+ LP +I  L+ L  L L 
Sbjct: 88  IGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQ-LTVLPESIGKLEHLGILNL- 145

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKN-LVRLPSSI 119
           G + L + P+ ++ +++L  LYL+   +A +P SI LL  L+  YL+   N L  +P  I
Sbjct: 146 GHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQ--YLDAQSNRLQSIPEEI 203

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             LK+LK L++ G   L  VP+++G++E L+EL +S   +    +SI  +K L+ LY   
Sbjct: 204 GQLKNLKYLSVDGN-HLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTLKDLY--- 259

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                      L+   LTG                  +P     
Sbjct: 260 ---------------------------LLYNKLTG------------------LPPGFGK 274

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L  LK++ L+ N   T P +I+ L  L+ L L D  +L SLP
Sbjct: 275 LQHLKDINLSHNRITTFPIAITKLTQLKSLAL-DSNQLTSLP 315



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 52/262 (19%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L + G  I  +PS+I+ L  LE L      +L +LP +I  LK L  L L+  + L K P
Sbjct: 51  LGVSGNKIEVLPSTIDKLQQLEELWF-NHNHLHTLPESIGKLKKLHELWLN-HNHLTKLP 108

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           + +  ++ L  L+LD   +  +P SI  L  L +L L    +L+ LP SI+ L++LK+L 
Sbjct: 109 ESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGH-NDLIELPESISKLQNLKSLY 167

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           L+   KL  +P+++G +++L+ LD     ++     I  +KNL+ L   G          
Sbjct: 168 LNKN-KLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGN--------- 217

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             HL                                     A +P  I  L  LKEL+L+
Sbjct: 218 --HL-------------------------------------AVVPESIGELEHLKELHLS 238

Query: 250 RNNFVTLPASISGLLNLEELEL 271
            N    LPASI+ L  L++L L
Sbjct: 239 HNRLTFLPASIAQLKTLKDLYL 260



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 4/159 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L+L    +T +P+SI  L  L+ L L   K L+ LP     L+ L+ + LS
Sbjct: 226 IGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNK-LTGLPPGFGKLQHLKDINLS 284

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++  FP  +  +  L  L LD   +  +P+++  L  LE+L LN+ + L++LP SI 
Sbjct: 285 -HNRITTFPIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQ-LIKLPKSIG 342

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAI 159
            L +L TL+L    KL +VP  +  + +LE L + G  I
Sbjct: 343 KLTNLTTLSLIN-NKLTDVPIEIQNLPNLEYLVLEGNPI 380



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 28/207 (13%)

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           E + KL +    +  +P  I+ LPGL +L ++  K  V LPS+I+ L+ L+ L  +    
Sbjct: 23  EAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEV-LPSTIDKLQQLEELWFN-HNH 80

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L  +P+++GK++ L EL ++   + +   SI  + +L  L             W  H   
Sbjct: 81  LHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDL-------------WLDHNQL 127

Query: 196 NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
            +L +S   +  +     G+ +L   DL +       +P  I  L +LK LYLN+N    
Sbjct: 128 TVLPESIGKLEHL-----GILNLGHNDLIE-------LPESISKLQNLKSLYLNKNKLAV 175

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQ 282
           LP SI  L NL+ L+ +   RLQS+P+
Sbjct: 176 LPESIGLLQNLQYLDAQ-SNRLQSIPE 201


>gi|116788284|gb|ABK24822.1| unknown [Picea sitchensis]
          Length = 495

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 133/296 (44%), Gaps = 53/296 (17%)

Query: 17  ITEVPSSIELLTGLELLT----LKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           ++ +P SI  L  LE +     L G  +L+ LP     L+ LR L L+ CSK+K      
Sbjct: 213 LSNIPKSIGWLEHLERIVVAGFLSGHVHLTKLPKEFCRLRSLRDLVLTECSKMKS----- 267

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
                             +P S   L  L+ + L+ C NL RLP SI  L+ L+ +NLS 
Sbjct: 268 ------------------LPDSFCHLWNLQHIDLSFCCNLERLPDSIGRLQGLRHINLSY 309

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL--YFSGCNEPPASASWH 190
           C  LE +PD++G++  L+ +D+ G              NL SL   F    + P S    
Sbjct: 310 CHDLERLPDSIGRLRGLQHIDLRGC------------HNLESLPDSFGELWDLPYSFG-- 355

Query: 191 LHLPFNL--LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
              P++L  +  S C     LP S   +  L  +DL  C     ++P    +L +L  + 
Sbjct: 356 --EPWDLRHINLSGCHDLQRLPDSFVNLRYLQHIDLQGCH-NLQSLPDGFGDLRNLDHVN 412

Query: 248 L-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLV 299
           L N ++   LP S   L NL+ ++L  C  L+ LP    N   L+++   GCS+L+
Sbjct: 413 LSNCHDLEWLPDSFGNLRNLQYIDLSGCHNLERLPNYFRNFNKLKYLDVEGCSNLI 468



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 12/177 (6%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++  +P SI  L GL  + L  C +L  LP +I  L+ L+ ++L GC  L+  P     +
Sbjct: 288 NLERLPDSIGRLQGLRHINLSYCHDLERLPDSIGRLRGLQHIDLRGCHNLESLPDSFGEL 347

Query: 76  ----------EDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
                      DL  + L G   +  +P S   L  L+ + L  C NL  LP     L++
Sbjct: 348 WDLPYSFGEPWDLRHINLSGCHDLQRLPDSFVNLRYLQHIDLQGCHNLQSLPDGFGDLRN 407

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGC 180
           L  +NLS C  LE +PD+ G + +L+ +D+SG   + R  +       L+ L   GC
Sbjct: 408 LDHVNLSNCHDLEWLPDSFGNLRNLQYIDLSGCHNLERLPNYFRNFNKLKYLDVEGC 464



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 4   MKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           ++ L DL L + + +  +P S   L  L+ + L  C NL  LP +I  L+ LR + LS C
Sbjct: 251 LRSLRDLVLTECSKMKSLPDSFCHLWNLQHIDLSFCCNLERLPDSIGRLQGLRHINLSYC 310

Query: 63  SKLKKFPQIVASMEDLSKLYLDGT-----------SIAEVPSSIELLPGLELLYLNECKN 111
             L++ P  +  +  L  + L G             + ++P S      L  + L+ C +
Sbjct: 311 HDLERLPDSIGRLRGLQHIDLRGCHNLESLPDSFGELWDLPYSFGEPWDLRHINLSGCHD 370

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMK 170
           L RLP S   L+ L+ ++L GC  L+++PD  G + +L+ +++S    +     S   ++
Sbjct: 371 LQRLPDSFVNLRYLQHIDLQGCHNLQSLPDGFGDLRNLDHVNLSNCHDLEWLPDSFGNLR 430

Query: 171 NLRSLYFSGCN 181
           NL+ +  SGC+
Sbjct: 431 NLQYIDLSGCH 441



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 4/132 (3%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
           + L  + L+GC +L+RLP +   L+YL  ++L G    +  P+       L  ++L    
Sbjct: 358 WDLRHINLSGCHDLQRLPDSFVNLRYLQHIDLQGCHNLQSLPDGFGDLRNLDHVNLSNCH 417

Query: 741 -IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
            +  LP S   L      +L  C NL+ LP+       L+ +   GCS L  + ET+   
Sbjct: 418 DLEWLPDSFGNLRNLQYIDLSGCHNLERLPNYFRNFNKLKYLDVEGCSNL--IIETIEIT 475

Query: 800 ESL-EVRLSSWN 810
           ++L E     WN
Sbjct: 476 DNLPEAIKGIWN 487



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 1/116 (0%)

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA-IRGLPA 746
           L+G  +L +LP+    L+ L  L L+  SK +  P+       L  I L     +  LP 
Sbjct: 235 LSGHVHLTKLPKEFCRLRSLRDLVLTECSKMKSLPDSFCHLWNLQHIDLSFCCNLERLPD 294

Query: 747 SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           SI  L G    NL  C +L+ LP +I  LR L+ +   GC  L+++ ++ G++  L
Sbjct: 295 SIGRLQGLRHINLSYCHDLERLPDSIGRLRGLQHIDLRGCHNLESLPDSFGELWDL 350



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 11/118 (9%)

Query: 694 LERLPRTISALKYLSTLNLSG-------LSKF-REFPEITSSRDQLLEIHLEGTAIRGLP 745
           L  +P++I  L++L  + ++G       L+K  +EF  + S RD +L    E + ++ LP
Sbjct: 213 LSNIPKSIGWLEHLERIVVAGFLSGHVHLTKLPKEFCRLRSLRDLVLT---ECSKMKSLP 269

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            S   L      +L  C NL+ LP +I  L+ LR +  S C  L+ + +++G++  L+
Sbjct: 270 DSFCHLWNLQHIDLSFCCNLERLPDSIGRLQGLRHINLSYCHDLERLPDSIGRLRGLQ 327



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 27/228 (11%)

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-----TA 158
           +Y +E K L    S +     L+   L     L N+P ++G +E LE + V+G       
Sbjct: 181 VYGSELKTLWEDESQVPWQVPLQLRELEINAPLSNIPKSIGWLEHLERIVVAGFLSGHVH 240

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTG-V 215
           + +       +++LR L  + C++  +      HL +NL  +  S C     LP   G +
Sbjct: 241 LTKLPKEFCRLRSLRDLVLTECSKMKSLPDSFCHL-WNLQHIDLSFCCNLERLPDSIGRL 299

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGL----------L 264
             L  ++LS C   E  +P  I  L  L+ + L   +N  +LP S   L           
Sbjct: 300 QGLRHINLSYCHDLE-RLPDSIGRLRGLQHIDLRGCHNLESLPDSFGELWDLPYSFGEPW 358

Query: 265 NLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTL---FGALK 306
           +L  + L  C  LQ LP    NL++++     GC +L +L   FG L+
Sbjct: 359 DLRHINLSGCHDLQRLPDSFVNLRYLQHIDLQGCHNLQSLPDGFGDLR 406


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 169/377 (44%), Gaps = 66/377 (17%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           D+  L L    +  +P  I  L  L++L L   + L++LP  I  LK L+ LEL+  ++L
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQ-LATLPKEIGQLKNLQVLELNN-NQL 104

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSL 125
              P+ +  +++L  L L+   +A +P  I  L  L++L LN  + L  LP  I  LK+L
Sbjct: 105 ATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQ-LATLPKEIGQLKNL 163

Query: 126 KTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPA 185
           + LNL    +L  +P+ +G++++ + L +S   +      I  +KNLR LY +  N+  A
Sbjct: 164 QWLNLV-TNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLN-TNQFTA 221

Query: 186 SAS-------------------------------WHLHLPFNLLGKSSCPVALMLPSLTG 214
                                               LHL +N L   S  +         
Sbjct: 222 FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIG-------Q 274

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL--- 271
           + +L  LDL+D  L    +P +I  L +L+ L LN N F T+P  I  L NL+ L+L   
Sbjct: 275 LQNLQVLDLNDNQL--KTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYN 332

Query: 272 ------EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK------LCRSKYTII-NCI 318
                 E+  +L++L  +     F+  N   +L    G LK      L  ++ T + N I
Sbjct: 333 QFKTVSEEIGQLKNLQML-----FLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEI 387

Query: 319 DSLKLLRKNGLAISMLR 335
             LK LR+  L+ + L+
Sbjct: 388 RQLKNLRELHLSYNQLK 404



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++   L L    +T +P  I  L  L  L L      ++ P  I  LK L+ L L 
Sbjct: 180 IGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYL-NTNQFTAFPKEIGQLKNLQQLNLY 238

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  P  +  +++L +L+L    +  + + I  L  L++L LN+ + L  LP  I 
Sbjct: 239 -ANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQ-LKTLPKEIG 296

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+ L+L+   + + VP+ +G++++L+ LD+     +  +  I  +KNL+ L+ +  
Sbjct: 297 QLKNLQVLDLNN-NQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNN 355

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                SA          +G+              + +L  L L+   L    +P++I  L
Sbjct: 356 QLKTLSAE---------IGQ--------------LKNLQMLSLNANQL--TTLPNEIRQL 390

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+EL+L+ N   TL A I  L NL++L L D  +L +LP+
Sbjct: 391 KNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRD-NQLTTLPK 431


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 117/250 (46%), Gaps = 11/250 (4%)

Query: 37  GCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE 96
           G   L+ LP TI  L  L  L ++  S L   P+ + ++  L++LY+  T IA +P SI 
Sbjct: 24  GVNQLTFLPDTIGDLTDLTELHITWFS-LTSLPESIGNLSKLTRLYVRNTKIARLPESIG 82

Query: 97  LLPGLELLYLNECKNLVR-LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
            L  L+ L L    NL+  LP+SI  L +L  LNLS   KL  +PD++G +  L  L++S
Sbjct: 83  NLSNLKELDL--TWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLS 140

Query: 156 GTAIRRPTSSIFLMKNLRSLYFSGCNE----PPASASWHLHLPFNLLGKSSCPVALMLPS 211
              I     SI  +  L+ L  S C++    P A  S        L G     +   +  
Sbjct: 141 AGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQ 200

Query: 212 LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L    +LT L ++   +    IP  I NL  L  L L+ N   +LP SI  L NL  L L
Sbjct: 201 LGAQSNLTHLYINSSSI--VTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNL 258

Query: 272 EDCKRLQSLP 281
           + C  +  LP
Sbjct: 259 K-CNNIAILP 267



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 141/281 (50%), Gaps = 28/281 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + DL++L++   S+T +P SI  L+ L  L ++  K ++ LP +I +L  L+ L+L+
Sbjct: 35  IGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTK-IARLPESIGNLSNLKELDLT 93

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD-GTSIAEVPSSIELLPGLELLYLNECKNLV-RLPSS 118
             + ++  P  +  + +L+ L L   T +AE+P SI  L   +L YLN    ++  LP S
Sbjct: 94  -WNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLS--KLTYLNLSAGVITTLPES 150

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I  L  LK LNLS C +L+ +P  +G +++L  + + G+      SSIF  K +  L   
Sbjct: 151 IGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSG----QSSIF--KTIEQL--- 201

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                  + S   HL  N     S  +  +  S+  +  LT LDLS   L   ++P  I 
Sbjct: 202 ------GAQSNLTHLYIN-----SSSIVTIPESIGNLSKLTHLDLSHNRLN--SLPESIG 248

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
            L +L  L L  NN   LP SI  L+NL  L L   K L++
Sbjct: 249 LLKNLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLRN 289



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 147/316 (46%), Gaps = 31/316 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL- 59
           + ++  L+ L L    IT +P SI  L  L+ L L  C  L  +P  I SLK L  ++L 
Sbjct: 128 IGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLW 187

Query: 60  -SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
            SG S + K  + + +  +L+ LY++ +SI  +P SI  L  L  L L+  + L  LP S
Sbjct: 188 GSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNR-LNSLPES 246

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV-SGTAIRRPTSSI---------FL 168
           I  LK+L  LNL  C  +  +P ++  + +L  L++ S   +R  + SI          L
Sbjct: 247 IGLLKNLVWLNLK-CNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNL 305

Query: 169 MKNLRSLYFSGCNEPPASASWHL------HLPFNL--LGKSSC------PVALMLPSLTG 214
             N   + F G          HL       LP N+  L K SC       +  +  +   
Sbjct: 306 SNNKVDILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGN 365

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           + +L KL+L+   +    +P DI NL  LKELYL +NN   LP SI  L +L  L+L   
Sbjct: 366 LVNLRKLNLNGNNINR--LPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGR- 422

Query: 275 KRLQSLPQIPPNLQFV 290
            ++  LP    NL  +
Sbjct: 423 NQISELPDTIGNLHNI 438



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 135/291 (46%), Gaps = 14/291 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++  L+ L L    +  +P SI LL  L  L LK C N++ LP++I  L  L  L L 
Sbjct: 224 IGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLK-CNNIAILPISIEHLVNLTYLNLY 282

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL-NECKNLVRLPSSI 119
               L+   + +  + +L+ L L    +  +   I  L  L  L+L N C  L  LP +I
Sbjct: 283 SNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNC--LTSLPENI 340

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L  L  L L    K+ ++    G + +L +L+++G  I R    I  +K L+ LY   
Sbjct: 341 GKLTKLSCLQLINN-KIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWK 399

Query: 180 CN--EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSD 236
            N  + P S      L    LG++       LP   G + ++ KLDL    L    +P  
Sbjct: 400 NNLEKLPDSIGNLTSLSILDLGRNQIS---ELPDTIGNLHNIEKLDLYKNRL--TCLPET 454

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           I NL S+  LYL RN    LP  +  L NL++L++ +  RL+ LP+   NL
Sbjct: 455 ISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWN-NRLRCLPESIGNL 504



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 19/167 (11%)

Query: 641 PQEPGNCS---RLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERL 697
           P+  GN S   RL+    +   + + + + ++++EL L   L+              E L
Sbjct: 55  PESIGNLSKLTRLYVRNTKIARLPESIGNLSNLKELDLTWNLI--------------EIL 100

Query: 698 PRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILS 757
           P +I  L  L+ LNLS  +K  E P+   +  +L  ++L    I  LP SI  L      
Sbjct: 101 PTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHL 160

Query: 758 NLKDCKNLKSLPSTINGLRSLR--MMYPSGCSKLKNVTETLGKVESL 802
           NL  C  L+ +P+ I  L++L    ++ SG S +    E LG   +L
Sbjct: 161 NLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGAQSNL 207



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 48/177 (27%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++K L +LYL   ++ ++P SI  LT L +L L G   +S LP TI +L  +  L+L 
Sbjct: 386 IGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDL-GRNQISELPDTIGNLHNIEKLDLY 444

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE------------------ 102
             ++L   P+ +++++ +S LYL    I  +P  +  L  L+                  
Sbjct: 445 K-NRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGN 503

Query: 103 ------------------------LLYLN--ECKN--LVRLPSSINGLKSLKTLNLS 131
                                   L+ LN  +C N  L  +P +I  + +LKTLNL+
Sbjct: 504 LAANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNITNLKTLNLT 560



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 33/175 (18%)

Query: 656 EFPDIVQVLSDGTD-------IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLS 708
           E PD +  LS  T        I  L  +I  L  L  L L+ C  L+++P  I +LK L+
Sbjct: 123 ELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLT 182

Query: 709 TLNLSGLSKFREF-------------------------PEITSSRDQLLEIHLEGTAIRG 743
            + L G  +   F                         PE   +  +L  + L    +  
Sbjct: 183 HIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNS 242

Query: 744 LPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           LP SI LL   +  NLK C N+  LP +I  L +L  +       L+N +E++GK
Sbjct: 243 LPESIGLLKNLVWLNLK-CNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGK 296


>gi|255567756|ref|XP_002524856.1| hypothetical protein RCOM_0723140 [Ricinus communis]
 gi|223535819|gb|EEF37480.1| hypothetical protein RCOM_0723140 [Ricinus communis]
          Length = 375

 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 150/348 (43%), Gaps = 47/348 (13%)

Query: 146 VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPV 205
           +ESL E+   GTAI+    SI  +K LR++   G  +  +  SW   +   L  ++    
Sbjct: 1   MESLTEILAYGTAIKLLPYSIGDLKKLRNVSL-GVLKDTSPRSWFSSISSWLSPRNPNSK 59

Query: 206 ALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLL 264
           +L+LP S   + SL  L L  C L E +IPS ++NL SL+ L L  N F  LP  I  L 
Sbjct: 60  SLLLPASFVCLSSLQSLALCHCNLTEDSIPS-LENLSSLQYLDLKGNKFSRLPTGIHSLT 118

Query: 265 NLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLL 324
            L+ L L  C  + S+ ++PP+L+ + A                       NCI   KL 
Sbjct: 119 KLDRLCLNSCTNIVSISELPPSLKVLYA----------------------YNCISLEKLS 156

Query: 325 RKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVN 384
            ++  A  +   Y + Q +S      +I  PGS++  WF +Q  GSS++   P  +   +
Sbjct: 157 IQSKEAPLLHLPYRQKQVLSKYRPLPAIFLPGSEVSSWFAHQGYGSSLSFYIPP-VSEGD 215

Query: 385 KVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFRGKFGH--VVSDHL 442
           ++ G  I  ++     S G     S PA       + S    YI+         V  DH 
Sbjct: 216 EIRGLFIWGIY-----SAGEQYDPSGPASPFAIIRNKSNGLEYIHRSAYLSTSLVREDHS 270

Query: 443 WLLFLP-------RHGHNWQFESNLIRLSFRSISDPTWKVKRCGFHPI 483
           W+ F+P       R G   + E  ++     ++      VK+CG H I
Sbjct: 271 WVTFVPFSLVPCSRKGGE-ELEVYVLVAGIATV------VKKCGVHHI 311



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 37/204 (18%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS-------------------- 43
           M+ L+++   GT+I  +P SI  L  L  ++L   K+ S                     
Sbjct: 1   MESLTEILAYGTAIKLLPYSIGDLKKLRNVSLGVLKDTSPRSWFSSISSWLSPRNPNSKS 60

Query: 44  --LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKL-YLD--GTSIAEVPSSIELL 98
             LP +   L  L++L L  C+  +     + S+E+LS L YLD  G   + +P+ I  L
Sbjct: 61  LLLPASFVCLSSLQSLALCHCNLTE---DSIPSLENLSSLQYLDLKGNKFSRLPTGIHSL 117

Query: 99  PGLELLYLNECKNLVRLPSSINGL-KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
             L+ L LN C N+V    SI+ L  SLK L    C  LE +     K   L  L     
Sbjct: 118 TKLDRLCLNSCTNIV----SISELPPSLKVLYAYNCISLEKL-SIQSKEAPLLHLPYRQK 172

Query: 158 AI---RRPTSSIFLMKNLRSLYFS 178
            +    RP  +IFL  +  S +F+
Sbjct: 173 QVLSKYRPLPAIFLPGSEVSSWFA 196


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 141/283 (49%), Gaps = 17/283 (6%)

Query: 14  GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
           G  +T +P  I  L  L+ L L+G + L++LP  I +L+ L+TL+LS  ++L   P+ + 
Sbjct: 118 GNKLTTLPKEIGNLQNLQELNLEGNQ-LTTLPEEIGNLQKLQTLDLS-HNRLTTLPKEIG 175

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +++ L  L L    +  +P  IE L  LE L+L   + L  LP  I  L++L+ LNL+  
Sbjct: 176 NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNE-LTTLPKEIGNLQNLQELNLN-S 233

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL-----YFSGCNEPPASAS 188
            +   +P+ +G ++ L++L ++ + +      I  ++NL+ L      F+   E   +  
Sbjct: 234 NQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 293

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
               L  N    ++ P       +  +  L KL+L    L    +P +I  L +LK L L
Sbjct: 294 KLQTLDLNYSRLTTLP-----KEIGKLQKLQKLNLYKNQL--KTLPKEIGKLQNLKNLSL 346

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           N N   TLP  I  L NL+EL L    +L +LP+   NLQ ++
Sbjct: 347 NGNELTTLPKEIGNLQNLQELSL-GSNQLTTLPEKIGNLQKLQ 388



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 53/282 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L  L L    +  +P  IE L  LE L L G   L++LP  I +L+ L+ L L+
Sbjct: 174 IGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHL-GNNELTTLPKEIGNLQNLQELNLN 232

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++    P+ + +++ L KL L  + +  +P  I  L  L+ L LN       LP  I 
Sbjct: 233 -SNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLN-SNQFTTLPEEIG 290

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+TL+L+   +L  +P  +GK++ L++L++    ++     I  ++NL++L  +G 
Sbjct: 291 NLQKLQTLDLN-YSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNG- 348

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           NE                             LT                   +P +I NL
Sbjct: 349 NE-----------------------------LT------------------TLPKEIGNL 361

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+EL L  N   TLP  I  L  L+EL L    RL++LP+
Sbjct: 362 QNLQELSLGSNQLTTLPEKIGNLQKLQELSLAG-NRLKTLPK 402



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 27/202 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L +L L+    T +P  I  L  L+ L L   + L++LP  I  L+ L+ L L 
Sbjct: 266 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSR-LTTLPKEIGKLQKLQKLNLY 324

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  P+ +  +++L  L L+G  +  +P  I  L  L+ L L     L  LP  I 
Sbjct: 325 K-NQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLG-SNQLTTLPEKIG 382

Query: 121 GLKSLKTLNLSGCCKLENVPDTLG-----------------------KVESLEELDVSGT 157
            L+ L+ L+L+G  +L+ +P  +G                        ++SLE L++SG 
Sbjct: 383 NLQKLQELSLAGN-RLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGN 441

Query: 158 AIRRPTSSIFLMKNLRSLYFSG 179
           ++      I  ++ L+ LY  G
Sbjct: 442 SLISFPEEIGKLQKLKWLYLGG 463



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           C+   +E D++ ++ + L   TD+R L L              G   L  LP+ I  L+ 
Sbjct: 84  CTIEADEKDKYYNLTEALQHPTDVRVLDLGPP----------EGGNKLTTLPKEIGNLQN 133

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNI--LSNLKDCKN 764
           L  LNL G ++    PE   +  +L  + L    +  LP  I    GN+  L  L   +N
Sbjct: 134 LQELNLEG-NQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEI----GNLQKLQTLDLAQN 188

Query: 765 -LKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL-EVRLSS 808
            LK+LP  I  L+ L  ++  G ++L  + + +G +++L E+ L+S
Sbjct: 189 QLKTLPKEIEKLQKLEALH-LGNNELTTLPKEIGNLQNLQELNLNS 233


>gi|242080847|ref|XP_002445192.1| hypothetical protein SORBIDRAFT_07g005710 [Sorghum bicolor]
 gi|241941542|gb|EES14687.1| hypothetical protein SORBIDRAFT_07g005710 [Sorghum bicolor]
          Length = 720

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 137/284 (48%), Gaps = 18/284 (6%)

Query: 11  YLDGTSITE--VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           YL+   I    +P+SI  L  L  L+L+G   L  +P +I  L+ L  L+LS CS+L+K 
Sbjct: 103 YLNAPKIQHRMIPNSITKLLKLMYLSLRGSSALLEMPDSIGDLEDLMYLDLSCCSELEKL 162

Query: 69  PQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           P+  + +  L  L L   T++  V  S+  L  LE L ++ C N+  LP     L  LK 
Sbjct: 163 PESFSRLNKLVHLDLSNCTNVTGVSESLPSLTNLEFLDISYCWNIRELPEHFGSLLKLKY 222

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLYFS--GCNEPP 184
           LN+SGC ++E +P ++G +++L  LD+S     + T  +   +  L+ L  S  GC +  
Sbjct: 223 LNMSGCDEIEELPGSIGNIKNLVHLDLSHCCQVKVTPQVLDCLTKLQYLNLSQCGCIDGT 282

Query: 185 ASA----------SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
             A            HL    + +       +  L  ++ +  L  LD+S C +G   +P
Sbjct: 283 KVAEALGNLTQLRQLHLSGFMDTMYHDESTFSTSLECISTLSYLEHLDIS-CNIGLLHLP 341

Query: 235 SDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRL 277
               +L  L  L L+  ++   LP SI+ + +L+ +  +DC+ L
Sbjct: 342 ERFGSLGKLHTLDLSDCSSLRFLPESIAQMDSLKRVYAKDCRPL 385



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 19/261 (7%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S T+ P+ I+ L  L+      C  +       SS K +R L+LS C  +++ P  V  +
Sbjct: 46  SYTDSPAKIKALRFLD------CGKIGLHGDAFSSAKYIRVLDLSDCF-IQELPDSVGQL 98

Query: 76  EDLSKLYLDGTSIAE--VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           + L   YL+   I    +P+SI  L  L  L L     L+ +P SI  L+ L  L+LS C
Sbjct: 99  KQLR--YLNAPKIQHRMIPNSITKLLKLMYLSLRGSSALLEMPDSIGDLEDLMYLDLSCC 156

Query: 134 CKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASW 189
            +LE +P++  ++  L  LD+S  T +   + S+  + NL  L  S C    E P     
Sbjct: 157 SELEKLPESFSRLNKLVHLDLSNCTNVTGVSESLPSLTNLEFLDISYCWNIRELPEHFGS 216

Query: 190 HLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
            L L +  L  S C     LP S+  + +L  LDLS C   +   P  +D L  L+ L L
Sbjct: 217 LLKLKY--LNMSGCDEIEELPGSIGNIKNLVHLDLSHCCQVKVT-PQVLDCLTKLQYLNL 273

Query: 249 NRNNFVTLPASISGLLNLEEL 269
           ++   +        L NL +L
Sbjct: 274 SQCGCIDGTKVAEALGNLTQL 294



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 671 RELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQ 730
           R +  +I  L  L+ L+L G   L  +P +I  L+ L  L+LS  S+  + PE  S  ++
Sbjct: 112 RMIPNSITKLLKLMYLSLRGSSALLEMPDSIGDLEDLMYLDLSCCSELEKLPESFSRLNK 171

Query: 731 LLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
           L+ + L   T + G+  S+  L+     ++  C N++ LP     L  L+ +  SGC ++
Sbjct: 172 LVHLDLSNCTNVTGVSESLPSLTNLEFLDISYCWNIRELPEHFGSLLKLKYLNMSGCDEI 231

Query: 790 KNVTETLGKVESL 802
           + +  ++G +++L
Sbjct: 232 EELPGSIGNIKNL 244



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 8/198 (4%)

Query: 648 SRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISA 703
           S L E  D   D+  +    LS  +++ +L  +   L  LV L L+ C N+  +  ++ +
Sbjct: 133 SALLEMPDSIGDLEDLMYLDLSCCSELEKLPESFSRLNKLVHLDLSNCTNVTGVSESLPS 192

Query: 704 LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDC 762
           L  L  L++S     RE PE   S  +L  +++ G   I  LP SI  +   +  +L  C
Sbjct: 193 LTNLEFLDISYCWNIRELPEHFGSLLKLKYLNMSGCDEIEELPGSIGNIKNLVHLDLSHC 252

Query: 763 KNLKSLPSTINGLRSLRMMYPS--GCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDFDC 820
             +K  P  ++ L  L+ +  S  GC     V E LG +  L     S     M +D + 
Sbjct: 253 CQVKVTPQVLDCLTKLQYLNLSQCGCIDGTKVAEALGNLTQLRQLHLSGFMDTMYHD-ES 311

Query: 821 VEQSAVETVTKLAKAELL 838
              +++E ++ L+  E L
Sbjct: 312 TFSTSLECISTLSYLEHL 329



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLS 752
           ++ LP ++  LK L  LN   + + R  P   +   +L+ + L G+ A+  +P SI  L 
Sbjct: 88  IQELPDSVGQLKQLRYLNAPKI-QHRMIPNSITKLLKLMYLSLRGSSALLEMPDSIGDLE 146

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSS--WN 810
             +  +L  C  L+ LP + + L  L  +  S C+ +  V+E+L  + +LE    S  WN
Sbjct: 147 DLMYLDLSCCSELEKLPESFSRLNKLVHLDLSNCTNVTGVSESLPSLTNLEFLDISYCWN 206

Query: 811 RPKMQNDF 818
             ++   F
Sbjct: 207 IRELPEHF 214



 Score = 40.0 bits (92), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           +  +Y D ++ +     I  L+ LE L +     L  LP    SL  L TL+LS CS L+
Sbjct: 303 MDTMYHDESTFSTSLECISTLSYLEHLDISCNIGLLHLPERFGSLGKLHTLDLSDCSSLR 362

Query: 67  KFPQIVASMEDLSKLY 82
             P+ +A M+ L ++Y
Sbjct: 363 FLPESIAQMDSLKRVY 378


>gi|221327743|gb|ACM17562.1| NBS-LRR disease resistance protein family-1 [Oryza brachyantha]
          Length = 1411

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 158/370 (42%), Gaps = 55/370 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +   K L  L   G     +P SI  L+ L  L L+G   + +LP +   +K L  L+LS
Sbjct: 584 IGQFKLLRYLNAPGVQYKNIPKSITKLSNLNYLILRGSSAIKALPESFGEMKSLMYLDLS 643

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           GCS +KK P     +E+L  L L     +  V  S E L  LE L L+ C N+  L  ++
Sbjct: 644 GCSGIKKLPGSFGKLENLVHLDLSNCFGLTCVSESFERLINLEYLDLSCCINIGDLNETL 703

Query: 120 NGLKSLKTLNLSGCCKL-----ENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
             L  L+ LNLS C  +     E V  TLG      +L  +   IRR   ++    NL+ 
Sbjct: 704 VNLLKLEYLNLSSCSYIELMCREEVRGTLGYF----DLSSNFCVIRRLPEALTRFNNLKY 759

Query: 175 LYFSG---CNEPPAS-----ASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSD 225
           L  SG     E P S     +  HL L       S C     +P   G + +L  L+LS 
Sbjct: 760 LNLSGWSKLEELPTSFGNMKSLIHLDL-------SKCSNIKGIPEALGSLTNLQFLNLSK 812

Query: 226 CG---LGEAAIPSDIDNLHSLKEL-YLN---------RNNFVTLPASISGLLNLEELELE 272
           C      E AI    + + +L +L YLN         ++  V+    I  L NLE L+L 
Sbjct: 813 CHNIFENELAIEEKAEAISNLNKLQYLNLSKLVQYHIKSTHVSFFGCIKTLSNLEHLDLS 872

Query: 273 DCKRLQSLPQ---IPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNG- 328
               L+SLP    I   L  +  +GC  L T+  +          I  IDSLK L  NG 
Sbjct: 873 GNDYLESLPDCFGILRKLHTLDLSGCRILKTVPAS----------IGQIDSLKYLDTNGC 922

Query: 329 --LAISMLRE 336
             L  S LR+
Sbjct: 923 SYLEWSTLRQ 932



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 7/259 (2%)

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
           +  SS K LR L+LSGCS +++ P  +   + L  L   G     +P SI  L  L  L 
Sbjct: 559 IGFSSSKFLRVLDLSGCS-IQRLPDCIGQFKLLRYLNAPGVQYKNIPKSITKLSNLNYLI 617

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTS 164
           L     +  LP S   +KSL  L+LSGC  ++ +P + GK+E+L  LD+S    +   + 
Sbjct: 618 LRGSSAIKALPESFGEMKSLMYLDLSGCSGIKKLPGSFGKLENLVHLDLSNCFGLTCVSE 677

Query: 165 SIFLMKNLRSLYFSGC-NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
           S   + NL  L  S C N    + +    L    L  SSC    ++       +L   DL
Sbjct: 678 SFERLINLEYLDLSCCINIGDLNETLVNLLKLEYLNLSSCSYIELMCREEVRGTLGYFDL 737

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           S        +P  +   ++LK L L+  +    LP S   + +L  L+L  C  ++ +P+
Sbjct: 738 SSNFCVIRRLPEALTRFNNLKYLNLSGWSKLEELPTSFGNMKSLIHLDLSKCSNIKGIPE 797

Query: 283 I---PPNLQFVRANGCSSL 298
                 NLQF+  + C ++
Sbjct: 798 ALGSLTNLQFLNLSKCHNI 816



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 29/133 (21%)

Query: 23   SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLY 82
            SI+ LT L+ L+L  C+ L++LP ++  L  L+ L +  C  L  FP+ +  +  L KL 
Sbjct: 1241 SIKHLTSLKKLSLSNCEALTALPHSVGDLSSLKELAVEHCPNLIGFPEGMGRLTSLKKL- 1299

Query: 83   LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC------CKL 136
                               E+ Y   CK++  LP+ I  L  L+ +++ GC      C+L
Sbjct: 1300 -------------------EICY---CKSIKSLPNGIEKLTMLEEIHIEGCPELKQWCEL 1337

Query: 137  ENVPDTLGKVESL 149
            E++   L +V +L
Sbjct: 1338 EDIKKRLARVSTL 1350



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 3/119 (2%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGL 744
           L L+GC +++RLP  I   K L  LN  G+ +++  P+  +    L  + L G+ AI+ L
Sbjct: 570 LDLSGC-SIQRLPDCIGQFKLLRYLNAPGV-QYKNIPKSITKLSNLNYLILRGSSAIKAL 627

Query: 745 PASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           P S   +   +  +L  C  +K LP +   L +L  +  S C  L  V+E+  ++ +LE
Sbjct: 628 PESFGEMKSLMYLDLSGCSGIKKLPGSFGKLENLVHLDLSNCFGLTCVSESFERLINLE 686



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 14   GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
            G    E+P  +  LT L+ L ++ C  + +   +I  L  L+ L LS C  L   P  V 
Sbjct: 1209 GLQAVELPEWLGQLTSLKRLKIR-CLEVEASLESIKHLTSLKKLSLSNCEALTALPHSVG 1267

Query: 74   SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             +  L +L ++                        C NL+  P  +  L SLK L +  C
Sbjct: 1268 DLSSLKELAVE-----------------------HCPNLIGFPEGMGRLTSLKKLEICYC 1304

Query: 134  CKLENVPDTLGKVESLEELDVSG 156
              ++++P+ + K+  LEE+ + G
Sbjct: 1305 KSIKSLPNGIEKLTMLEEIHIEG 1327



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
            S+ K+L  L+LSG S  +  P+       L  ++  G   + +P SI  LS      L+
Sbjct: 561 FSSSKFLRVLDLSGCS-IQRLPDCIGQFKLLRYLNAPGVQYKNIPKSITKLSNLNYLILR 619

Query: 761 DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
               +K+LP +   ++SL  +  SGCS +K +  + GK+E+L
Sbjct: 620 GSSAIKALPESFGEMKSLMYLDLSGCSGIKKLPGSFGKLENL 661



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKF----- 718
           LS  + + EL  +   +  L+ L L+ C N++ +P  + +L  L  LNLS          
Sbjct: 762 LSGWSKLEELPTSFGNMKSLIHLDLSKCSNIKGIPEALGSLTNLQFLNLSKCHNIFENEL 821

Query: 719 --REFPEITSSRDQL--------LEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSL 768
              E  E  S+ ++L        ++ H++ T +      I+ LS     +L     L+SL
Sbjct: 822 AIEEKAEAISNLNKLQYLNLSKLVQYHIKSTHV-SFFGCIKTLSNLEHLDLSGNDYLESL 880

Query: 769 PSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           P     LR L  +  SGC  LK V  ++G+++SL+
Sbjct: 881 PDCFGILRKLHTLDLSGCRILKTVPASIGQIDSLK 915



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 11/171 (6%)

Query: 673 LSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLL 732
           +S + E L  L  L L+ C N+  L  T+  L  L  LNLS  S + E       R  L 
Sbjct: 675 VSESFERLINLEYLDLSCCINIGDLNETLVNLLKLEYLNLSSCS-YIELMCREEVRGTLG 733

Query: 733 EIHLEGT--AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLK 790
              L      IR LP ++   +     NL     L+ LP++   ++SL  +  S CS +K
Sbjct: 734 YFDLSSNFCVIRRLPEALTRFNNLKYLNLSGWSKLEELPTSFGNMKSLIHLDLSKCSNIK 793

Query: 791 NVTETLGKVESLEVRLSSWNRPKMQNDFD---CVEQSAVETVTKLAKAELL 838
            + E LG + +L+      N  K  N F+    +E+ A E ++ L K + L
Sbjct: 794 GIPEALGSLTNLQF----LNLSKCHNIFENELAIEEKA-EAISNLNKLQYL 839



 Score = 39.7 bits (91), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 10/199 (5%)

Query: 106 LNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSS 165
           L  C    +LP S+     L+ +      KLE         + L  LD+SG +I+R    
Sbjct: 526 LTVCSKPSKLPESL--FAKLRAIRFMDNTKLELRDIGFSSSKFLRVLDLSGCSIQRLPDC 583

Query: 166 IFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
           I   K LR L   G      P S +   +L + +L  SS   AL   S   + SL  LDL
Sbjct: 584 IGQFKLLRYLNAPGVQYKNIPKSITKLSNLNYLILRGSSAIKALP-ESFGEMKSLMYLDL 642

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           S C  G   +P     L +L  L L N      +  S   L+NLE L+L  C  +  L +
Sbjct: 643 SGCS-GIKKLPGSFGKLENLVHLDLSNCFGLTCVSESFERLINLEYLDLSCCINIGDLNE 701

Query: 283 IPPN---LQFVRANGCSSL 298
              N   L+++  + CS +
Sbjct: 702 TLVNLLKLEYLNLSSCSYI 720


>gi|357499697|ref|XP_003620137.1| Resistance protein [Medicago truncatula]
 gi|355495152|gb|AES76355.1| Resistance protein [Medicago truncatula]
          Length = 1257

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 173/402 (43%), Gaps = 56/402 (13%)

Query: 6    DLSD-LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISS-LKCLRTLELSGCS 63
            DLSD + L+   I E      +L  LE L L  C NL S P+ +   L  L+TL +  C 
Sbjct: 815  DLSDCISLESFPIVEDGIPPLMLDSLETLDLSNCYNLESFPLVVDGFLGKLKTLLVGSCH 874

Query: 64   KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIE--LLPGLELLYLNECKNLVRLPSSING 121
            KL+  P +   ++ L KL L      E   S+E  LL  L+ L +  C  L  +P     
Sbjct: 875  KLRSIPPL--KLDSLEKLDLSYCCSLESFLSVEDGLLDKLKFLNIECCVMLRNIPWL--K 930

Query: 122  LKSLKTLNLSGC--CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            L SL+  NLS C    LE+ PD LG++ ++  L +  T I         +  L++ +   
Sbjct: 931  LTSLEHFNLSCCYSLDLESFPDILGEMRNIPGLLLDETTIEELPFPFQNLTQLQTFHPCN 990

Query: 180  CNEPPASASWHLHLPFNLLGKSSCPVA-LMLPSLTGVCSLTKLD-----LSDCGLGEAAI 233
            C      +S      F ++ +    VA   + +   V ++         + DC L +  +
Sbjct: 991  CEYVYVPSSMSKLAEFTIMNERMSKVAEFTIQNEEKVYAIQSAHVKYICIRDCKLSDEYL 1050

Query: 234  PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRAN 293
              ++    ++KEL+L    F  LP SI     L +L L+DCK LQ +   PP+L+ + A 
Sbjct: 1051 SLNLMLFANVKELHLTNIQFTVLPKSIEKCHFLWKLVLDDCKDLQEIKGNPPSLKMLSAL 1110

Query: 294  GCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIV 353
             C SL +       C+S            +L K            EL    +   +L   
Sbjct: 1111 NCISLTSS------CKS------------ILVKQ-----------ELHEDGNTWFRL--- 1138

Query: 354  FPGSQIPKWFMYQNE-GSSITVTRPSYLYNVNKVVGFAICCV 394
             P ++IP+WF +Q+E G SI+       + +NK    A+C V
Sbjct: 1139 -PQTKIPEWFDHQSEAGLSIS------FWFLNKFPAIALCVV 1173



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 105/229 (45%), Gaps = 26/229 (11%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           +G  +  +  SI  L  L++  +  C  + S+P    SL  L  +E S C  L+ FP +V
Sbjct: 678 NGEKVIAIDKSIGFLGKLKIFRIISCAEIRSVPPL--SLASLEEIEFSHCYSLESFPLMV 735

Query: 73  ASMEDLSKL----YLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL-KSLKT 127
                L KL     ++ T I  +PS I  LP LE L L++C  L   P  ++G    LKT
Sbjct: 736 NRF--LGKLKILRVINCTKIKIIPSLI--LPSLEELDLSDCTGLESFPPLVDGFGDKLKT 791

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVS------GTAIRRPTSSIFLMKNLRSLYFSGCN 181
           +++ GC  + ++P  +  + SLEELD+S         I        ++ +L +L  S C 
Sbjct: 792 MSVRGCINIRSIPTLM--LASLEELDLSDCISLESFPIVEDGIPPLMLDSLETLDLSNCY 849

Query: 182 E----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
                P     +   L   L+G  SC     +P L  + SL KLDLS C
Sbjct: 850 NLESFPLVVDGFLGKLKTLLVG--SCHKLRSIPPLK-LDSLEKLDLSYC 895



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 23/264 (8%)

Query: 26  LLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMED-LSKLYLD 84
            L  L++L +  C  +  +P  I  L  L  L+LS C+ L+ FP +V    D L  + + 
Sbjct: 738 FLGKLKILRVINCTKIKIIPSLI--LPSLEELDLSDCTGLESFPPLVDGFGDKLKTMSVR 795

Query: 85  G-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING-----LKSLKTLNLSGCCKLEN 138
           G  +I  +P+   +L  LE L L++C +L   P   +G     L SL+TL+LS C  LE+
Sbjct: 796 GCINIRSIPTL--MLASLEELDLSDCISLESFPIVEDGIPPLMLDSLETLDLSNCYNLES 853

Query: 139 VP----DTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASWHLH 192
            P      LGK+++L    + G+  +  +     + +L  L  S C   E   S    L 
Sbjct: 854 FPLVVDGFLGKLKTL----LVGSCHKLRSIPPLKLDSLEKLDLSYCCSLESFLSVEDGLL 909

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRN 251
                L    C +   +P L  + SL   +LS C  L   + P  +  + ++  L L+  
Sbjct: 910 DKLKFLNIECCVMLRNIPWLK-LTSLEHFNLSCCYSLDLESFPDILGEMRNIPGLLLDET 968

Query: 252 NFVTLPASISGLLNLEELELEDCK 275
               LP     L  L+     +C+
Sbjct: 969 TIEELPFPFQNLTQLQTFHPCNCE 992



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 35/227 (15%)

Query: 66  KKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           K F    +  E++  L LD +  +AE+P+ I  LP LE   +   + ++ +  SI  L  
Sbjct: 636 KGFFTKASKFENMRVLNLDHSEGLAEIPN-ISGLPNLEEFSIQNGEKVIAIDKSIGFLGK 694

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           LK   +  C ++ +VP     + SLEE++ S         S  LM N     F G     
Sbjct: 695 LKIFRIISCAEIRSVPPL--SLASLEEIEFSHCY---SLESFPLMVN----RFLG----- 740

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
                       +L   +C    ++PSL  + SL +LDLSDC  G  + P  +D      
Sbjct: 741 ---------KLKILRVINCTKIKIIPSLI-LPSLEELDLSDCT-GLESFPPLVDGFGDKL 789

Query: 245 ELYLNRN--NFVTLPASISGLLNLEELELEDCKRLQSLP----QIPP 285
           +    R   N  ++P  +  L +LEEL+L DC  L+S P     IPP
Sbjct: 790 KTMSVRGCINIRSIPTLM--LASLEELDLSDCISLESFPIVEDGIPP 834


>gi|168056430|ref|XP_001780223.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668373|gb|EDQ54982.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 370

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 143/290 (49%), Gaps = 21/290 (7%)

Query: 30  LELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIA 89
           L++L +K    L  LP +  +L  L  L+L+GC KL+  P  ++ ++ L KL L   SI 
Sbjct: 3   LQVLQIKYYLELEKLPTSKGNLFNLNELQLNGCRKLETMPNTISDLKRLHKLNLRSCSIL 62

Query: 90  EV-PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVES 148
           +V P SI  L  L++L +  C  ++ LPS I+ + + K L L+   +LE +P+T+G++  
Sbjct: 63  QVLPPSISNLTSLQILTMVNCDQIIYLPSPISLILNFKDLILNRSRQLETLPNTIGELRR 122

Query: 149 LEELDVSGTAIRRPT---SSIFLMKNLRSLYFS---GCNEPPASASWHLHLPFNLLGKSS 202
           L+ L +      +     SSI  + N + L F         P + S      F  L   S
Sbjct: 123 LQRLTLKMANFYQIIFLPSSISKLSNFKELIFDMYGKLETLPNTISEVKR--FEGLNLRS 180

Query: 203 CP-VALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASI 260
           C  + ++LPS++ + SL  L   +C      +PS I  L +LKEL L+      TLP +I
Sbjct: 181 CKSLHILLPSISNLISLQILLKVNCD-QIVLLPSPIYKLSNLKELILDMCGELETLPNTI 239

Query: 261 SGL-----LNLE--ELELEDCKRLQSLPQIPPNLQFVRAN--GCSSLVTL 301
           S L     LNL   +L L+ CK LQ LP +  NL   R     C SL  L
Sbjct: 240 SELKRFEGLNLRSYKLNLKSCKSLQILPSLIYNLTLKRLTLKSCKSLQIL 289



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 38/348 (10%)

Query: 19  EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
           ++P+S   L  L  L L GC+ L ++P TIS LK L  L L  CS L+  P  ++++  L
Sbjct: 16  KLPTSKGNLFNLNELQLNGCRKLETMPNTISDLKRLHKLNLRSCSILQVLPPSISNLTSL 75

Query: 79  SKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK--TLNLSGCCK 135
             L + +   I  +PS I L+   + L LN  + L  LP++I  L+ L+  TL ++   +
Sbjct: 76  QILTMVNCDQIIYLPSPISLILNFKDLILNRSRQLETLPNTIGELRRLQRLTLKMANFYQ 135

Query: 136 LENVPDTLGKVESLEEL--DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
           +  +P ++ K+ + +EL  D+ G     P ++I  +K    L    C       S H+ L
Sbjct: 136 IIFLPSSISKLSNFKELIFDMYGKLETLP-NTISEVKRFEGLNLRSC------KSLHILL 188

Query: 194 P-------FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
           P         +L K +C   ++LPS +  + +L +L L  CG  E  +P+ I  L   + 
Sbjct: 189 PSISNLISLQILLKVNCDQIVLLPSPIYKLSNLKELILDMCGELE-TLPNTISELKRFEG 247

Query: 246 LYLNR--------NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR---ANG 294
           L L           +   LP+ I   L L+ L L+ CK LQ LP +  NL F++      
Sbjct: 248 LNLRSYKLNLKSCKSLQILPSLIYN-LTLKRLTLKSCKSLQILPSLISNLTFLQILTMVD 306

Query: 295 CSSLVTLFGALKLCR----SKYTIINCIDSLKLLRKNGLAISMLREYL 338
           C  +      L +C        TII+C D L  L+K+   +S L E++
Sbjct: 307 CDQISLQILPLLICNLTSLQILTIIDC-DQLLQLQKSIGNLSKLLEFI 353



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 27/154 (17%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQL-LEIHLEG 738
           LF L +L LNGC+ LE +P TIS LK L  LNL   S  +  P   S+   L +   +  
Sbjct: 24  LFNLNELQLNGCRKLETMPNTISDLKRLHKLNLRSCSILQVLPPSISNLTSLQILTMVNC 83

Query: 739 TAIRGLPASIELLSGNILSNLKDC-----KNLKSLPSTINGLRSLR------------MM 781
             I  LP+ I L     + N KD      + L++LP+TI  LR L+            + 
Sbjct: 84  DQIIYLPSPISL-----ILNFKDLILNRSRQLETLPNTIGELRRLQRLTLKMANFYQIIF 138

Query: 782 YPSGCSKLKNVTETL----GKVESLEVRLSSWNR 811
            PS  SKL N  E +    GK+E+L   +S   R
Sbjct: 139 LPSSISKLSNFKELIFDMYGKLETLPNTISEVKR 172


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 6/275 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +KDL  LYL    +  +P  I  L  L+ L L+  + L++LP  I  LK L+ L+L 
Sbjct: 109 IEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQ-LTTLPTEIGQLKNLQRLQLW 167

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P+ I  L  L+ LYL     L  LP+ I 
Sbjct: 168 N-NQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLG-SNQLTALPNEIG 225

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L+LS   +L  +P+ +G++++L++L +    +    + I  +KNL++LY    
Sbjct: 226 QLQKLQELSLS-TNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSN 284

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S           L   +  +      +  + +L  LDL    L    +P +I  L
Sbjct: 285 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQL--TTLPKEIGQL 342

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +L+   LN N   TLP  I  L NL+EL L D +
Sbjct: 343 KNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQ 377



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 36/274 (13%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R L+LS   KLK  P  +  +++L +LYL    +  +P  I  L  L +L L   + L 
Sbjct: 46  VRVLDLSQ-QKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQ-LE 103

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            LP+ I  LK L+ L LS   +L+ +P  + ++++L+EL +    +    + I  +KNL+
Sbjct: 104 TLPNEIEQLKDLQRLYLS-YNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQ 162

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AA 232
            L             W+  L             + LP   G   L  L   + G  +  A
Sbjct: 163 RLQL-----------WNNQL-------------MTLPEEIG--QLKNLQTLNLGYNQLTA 196

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ---- 288
           +P++I  L +L+ELYL  N    LP  I  L  L+EL L    RL +LP     LQ    
Sbjct: 197 LPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSL-STNRLTTLPNEIGQLQNLQD 255

Query: 289 -FVRANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
            ++ +N  + L    G LK  ++ Y   N + +L
Sbjct: 256 LYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTL 289


>gi|147841724|emb|CAN64358.1| hypothetical protein VITISV_040361 [Vitis vinifera]
          Length = 439

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 27/179 (15%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           +  LE L L+    +  LP +I  L+ L  L+LS CSK +KFP+   +M++L+KL L  T
Sbjct: 1   MKSLEELDLRNTA-IKDLPDSIGDLESLWLLDLSDCSKFEKFPEKGGNMKNLTKLLLKNT 59

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVR-----------------------LPSSINGLK 123
           +I ++P SI  L  LE L L++C    +                       LP +I  L+
Sbjct: 60  AIKDLPDSIGDLEYLEFLDLSDCSKFEKFPEKGGKMKSLMELHLKNTAIKGLPDNIGDLE 119

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
           SL+ L+LS C K E  P+  G ++SL  LD+  TA+  PT +I  +KNL  L   GC++
Sbjct: 120 SLEFLDLSACSKFEKFPEKGGNMKSLIHLDLKNTAL--PT-NISRLKNLARLILGGCSD 175



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 16/170 (9%)

Query: 633 RQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCK 692
           R T  +  P   G+   LW         +  LSD +   +       +  L +L L    
Sbjct: 10  RNTAIKDLPDSIGDLESLW---------LLDLSDCSKFEKFPEKGGNMKNLTKLLLKNTA 60

Query: 693 NLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLS 752
            ++ LP +I  L+YL  L+LS  SKF +FPE       L+E+HL+ TAI+GLP +I  L 
Sbjct: 61  -IKDLPDSIGDLEYLEFLDLSDCSKFEKFPEKGGKMKSLMELHLKNTAIKGLPDNIGDLE 119

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSL------RMMYPSGCSKLKNVTETL 796
                +L  C   +  P     ++SL          P+  S+LKN+   +
Sbjct: 120 SLEFLDLSACSKFEKFPEKGGNMKSLIHLDLKNTALPTNISRLKNLARLI 169


>gi|297794721|ref|XP_002865245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311080|gb|EFH41504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1082

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 139/313 (44%), Gaps = 29/313 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             ++KDL  L L   ++     S+  L  L +L ++ C  L  +   + SL+ LR LE+S
Sbjct: 474 FGTLKDLEILGLFKPTLDHFVPSLLTLVKLRVLVIRDCDRLKDIE-DLKSLEGLRVLEVS 532

Query: 61  GCSKLKKFP-QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           G S LKK   +   ++  L  L+L    I   PSSI  L  L  L + +C  L  LP  I
Sbjct: 533 GASSLKKISDEFFKALSKLQSLHLSELQITSSPSSISELTELHCLIIKDCPLLEDLPD-I 591

Query: 120 NGLKSLKTLNLSGCCKLENVPDT--LGKVESLEELDVSGTAIRR-PTSSIFLM-KNLRSL 175
             L  L+ +++SG   L+   D      +  L+ LD S + I R P    FL+   L SL
Sbjct: 592 QELVKLEVVDISGARGLQTCFDNRNFYHLTQLQLLDFSESQIERLPMFQDFLVPARLHSL 651

Query: 176 YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
                      A   LH         +C     LP+L  +  L  LDLS        +  
Sbjct: 652 -----------ARLLLH---------NCKKLRKLPNLKPLSGLQILDLSGSSSLVKILEV 691

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRAN 293
             ++   L+ L L+  N   LP++I  L NL EL L DC  L++LP I    NL+    +
Sbjct: 692 CFEDKKELRILNLSGTNLCQLPSTIEELPNLSELLLRDCTNLEALPNIAKLRNLEIFEVH 751

Query: 294 GCSSLVTLFGALK 306
           GC+ L  + G+ +
Sbjct: 752 GCTKLHKIDGSFE 764



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI-VASMEDLSKLYLDG 85
           L  L  L L  CK L  LP  +  L  L+ L+LSG S L K  ++     ++L  L L G
Sbjct: 648 LHSLARLLLHNCKKLRKLP-NLKPLSGLQILDLSGSSSLVKILEVCFEDKKELRILNLSG 706

Query: 86  TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGK 145
           T++ ++PS+IE LP L  L L +C NL  LP +I  L++L+   + GC KL  +  +   
Sbjct: 707 TNLCQLPSTIEELPNLSELLLRDCTNLEALP-NIAKLRNLEIFEVHGCTKLHKIDGSFED 765

Query: 146 VESLEELDVSGTAIRRP 162
           +  L E+D+SGT + +P
Sbjct: 766 MSYLREIDLSGTKVMKP 782



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 1/88 (1%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K+L  L L GT++ ++PS+IE L  L  L L+ C NL +LP  I+ L+ L   E+ GC+K
Sbjct: 697 KELRILNLSGTNLCQLPSTIEELPNLSELLLRDCTNLEALP-NIAKLRNLEIFEVHGCTK 755

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVP 92
           L K       M  L ++ L GT + + P
Sbjct: 756 LHKIDGSFEDMSYLREIDLSGTKVMKPP 783



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 3/114 (2%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEIT-SSRDQLLEIHLEG 738
           L  L +L L+ CK L +LP  +  L  L  L+LSG S   +  E+    + +L  ++L G
Sbjct: 648 LHSLARLLLHNCKKLRKLP-NLKPLSGLQILDLSGSSSLVKILEVCFEDKKELRILNLSG 706

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           T +  LP++IE L       L+DC NL++LP+ I  LR+L +    GC+KL  +
Sbjct: 707 TNLCQLPSTIEELPNLSELLLRDCTNLEALPN-IAKLRNLEIFEVHGCTKLHKI 759


>gi|175363360|gb|ACB72455.1| Pc protein B [Sorghum bicolor]
          Length = 1194

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 119/244 (48%), Gaps = 16/244 (6%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L  L +   S T VP +I     L+ L    CK   +LP ++  L+ LRTLEL     ++
Sbjct: 589 LGYLEIHNVSCTTVPEAISRCWNLQSLHFVNCKGFVTLPESVGKLQKLRTLELRRIIDIE 648

Query: 67  KFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING-LKS 124
             PQ +     L  L L D + + E+PSS+  +  L +L +  C +L +LPS I G  K+
Sbjct: 649 SLPQSIGDCYVLQSLQLYDCSMLREIPSSLGRIGSLCVLDIERCSSLQQLPSDIIGEFKN 708

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--- 181
           L+T+N +GC  L+++P TL    +L  L++SGT +      +  +  L  +   GC    
Sbjct: 709 LRTINFNGCTGLQDLPTTLS-CPTLRTLNLSGTKVTMLPQWVTSIGTLECIDLEGCKELL 767

Query: 182 EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-----LSDCGLGEAAIPSD 236
           E P   S    LP  +L    C     LP  TG+  LT+L      +  CG  +A I S+
Sbjct: 768 ELPKGISNLKRLP--VLNIKHCSKLCCLP--TGLGQLTRLRELGLFVVGCGADDARI-SE 822

Query: 237 IDNL 240
           ++NL
Sbjct: 823 LENL 826



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 141/368 (38%), Gaps = 48/368 (13%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLE 102
           S   T+ +  C+R++ L        F   +   E L  L +   S   VP +I     L+
Sbjct: 555 SFDTTVKNSCCMRSVVLDYAID-TPFSLFILKFEYLGYLEIHNVSCTTVPEAISRCWNLQ 613

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLS------------------------GCCKLEN 138
            L+   CK  V LP S+  L+ L+TL L                          C  L  
Sbjct: 614 SLHFVNCKGFVTLPESVGKLQKLRTLELRRIIDIESLPQSIGDCYVLQSLQLYDCSMLRE 673

Query: 139 VPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSGC---NEPPASASWHLHL 193
           +P +LG++ SL  LD+    +  + P+  I   KNLR++ F+GC    + P + S     
Sbjct: 674 IPSSLGRIGSLCVLDIERCSSLQQLPSDIIGEFKNLRTINFNGCTGLQDLPTTLSCPTLR 733

Query: 194 PFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-N 251
             NL G        MLP  +T + +L  +DL  C      +P  I NL  L  L +   +
Sbjct: 734 TLNLSGTK----VTMLPQWVTSIGTLECIDLEGCK-ELLELPKGISNLKRLPVLNIKHCS 788

Query: 252 NFVTLPASISGLLNLEELEL------EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGAL 305
               LP  +  L  L EL L       D  R+  L  +      +       L     A 
Sbjct: 789 KLCCLPTGLGQLTRLRELGLFVVGCGADDARISELENLDMIGGRLEITNLKYLKDPSDAE 848

Query: 306 KLCRSKYTIINCIDSLKLLR--KNGLAISMLREYLELQAVSDPGHKLSIVFPGSQ---IP 360
           K C  + + I  ++ +  L   +  L   M  ++  L A+  P    S+   G +   +P
Sbjct: 849 KACLKRKSNIQHLELIWSLSDAEEELVSDMEHDWGVLNALEPPSQIESLDIYGYRGPCLP 908

Query: 361 KWFMYQNE 368
            W M QN+
Sbjct: 909 GWMMKQND 916



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 133/315 (42%), Gaps = 45/315 (14%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
            L  L L GT +T +P  +  +  LE + L+GCK L  LP  IS+LK L  L +  CSKL 
Sbjct: 732  LRTLNLSGTKVTMLPQWVTSIGTLECIDLEGCKELLELPKGISNLKRLPVLNIKHCSKLC 791

Query: 67   KFPQIVASMEDLSKLYL-------DGTSIAEVPSSIELLPG-LELLYLNECKN------- 111
              P  +  +  L +L L       D   I+E+  +++++ G LE+  L   K+       
Sbjct: 792  CLPTGLGQLTRLRELGLFVVGCGADDARISEL-ENLDMIGGRLEITNLKYLKDPSDAEKA 850

Query: 112  LVRLPSSINGLK---SLKTLNLSGCCKLENVPDTLGKVE---SLEELDVSGTAIRRPTSS 165
             ++  S+I  L+   SL          +E+    L  +E    +E LD+ G   R P   
Sbjct: 851  CLKRKSNIQHLELIWSLSDAEEELVSDMEHDWGVLNALEPPSQIESLDIYG--YRGPCLP 908

Query: 166  IFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSD 225
             ++MK   SLY  G      + + H  L   LL     P    +     + SL  L+L++
Sbjct: 909  GWMMKQNDSLYCEGGIMLKQTVASHF-LCLTLLSLVRFPNLRHMRGFVELPSLKTLELAE 967

Query: 226  CGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISG---LLNLEELELEDCKRLQSLPQ 282
                          + +L+EL+   + F T    ++       L  LE+  C +L   P 
Sbjct: 968  --------------MPNLEELWTTSSGFETGEKELAAQHLFPVLSSLEIYGCPKLNVSPY 1013

Query: 283  IPPNLQFV---RANG 294
             PP+L  +   R NG
Sbjct: 1014 FPPSLVHMSLNRING 1028



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPR-TISALKYLSTLNLSGLSKFREFP 722
           L D + +RE+  ++  +  L  L +  C +L++LP   I   K L T+N +G +  ++ P
Sbjct: 665 LYDCSMLREIPSSLGRIGSLCVLDIERCSSLQQLPSDIIGEFKNLRTINFNGCTGLQDLP 724

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
             T S   L  ++L GT +  LP  +  +      +L+ CK L  LP  I+ L+ L ++ 
Sbjct: 725 -TTLSCPTLRTLNLSGTKVTMLPQWVTSIGTLECIDLEGCKELLELPKGISNLKRLPVLN 783

Query: 783 PSGCSKLKNVTETLGKVESL 802
              CSKL  +   LG++  L
Sbjct: 784 IKHCSKLCCLPTGLGQLTRL 803



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 12/128 (9%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  +  NGC  L+ LP T+S    L TLNLSG +K    P+  +S   L  I LEG   +
Sbjct: 709 LRTINFNGCTGLQDLPTTLSC-PTLRTLNLSG-TKVTMLPQWVTSIGTLECIDLEGCKEL 766

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM--MYPSGC-------SKLKNV 792
             LP  I  L    + N+K C  L  LP+ +  L  LR   ++  GC       S+L+N+
Sbjct: 767 LELPKGISNLKRLPVLNIKHCSKLCCLPTGLGQLTRLRELGLFVVGCGADDARISELENL 826

Query: 793 TETLGKVE 800
               G++E
Sbjct: 827 DMIGGRLE 834



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 676 AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIH 735
           AI   + L  L    CK    LP ++  L+ L TL L  +      P+       L  + 
Sbjct: 605 AISRCWNLQSLHFVNCKGFVTLPESVGKLQKLRTLELRRIIDIESLPQSIGDCYVLQSLQ 664

Query: 736 L-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTING-LRSLRMMYPSGCSKLKNVT 793
           L + + +R +P+S+  +    + +++ C +L+ LPS I G  ++LR +  +GC+ L+++ 
Sbjct: 665 LYDCSMLREIPSSLGRIGSLCVLDIERCSSLQQLPSDIIGEFKNLRTINFNGCTGLQDLP 724

Query: 794 ETL 796
            TL
Sbjct: 725 TTL 727



 Score = 45.8 bits (107), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 20/216 (9%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSI---ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTL 57
            +A M +L +L+   +        +    L   L  L + GC  L+  P    SL  +   
Sbjct: 965  LAEMPNLEELWTTSSGFETGEKELAAQHLFPVLSSLEIYGCPKLNVSPYFPPSLVHMSLN 1024

Query: 58   ELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSS------IELLPGLELLYLNECKN 111
             ++G  +L    +    +  +  + L    ++EV  S      ++ L  L+ LY++ C +
Sbjct: 1025 RING--QLLSTGRFSHQLPSMHAMVLQSLVLSEVTGSSSGWELLQHLTELKELYIDTCND 1082

Query: 112  LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT-AIRRPTSSIFLMK 170
            L + P S+  L SL+ L LS    L  +P+ +G++ +L  L +  + A++    SI  + 
Sbjct: 1083 LTQFPESMRNLTSLEHLELSSGPALTVLPEWIGQLSALRSLYIQHSPALQYLPQSIQRLT 1142

Query: 171  NLRSLYFSGC------NEPPASASWHL--HLPFNLL 198
             L  L   GC       +  A   WHL  H+P  ++
Sbjct: 1143 ALEELRIYGCPGLAERYKRGAGPDWHLVSHIPLVVI 1178


>gi|168051179|ref|XP_001778033.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670576|gb|EDQ57142.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 361

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 124/279 (44%), Gaps = 56/279 (20%)

Query: 17  ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           I E+  SI  L  L+ L  +GC  L  LP  I +L  L T+ LS CS L+  P  + ++ 
Sbjct: 129 IQEISFSIGRLRSLQELNCRGCDRLERLPENIGALTRLETINLSLCSALRSIPSSIGALT 188

Query: 77  DLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            LSKL L     +  +P SI  L  L  L ++ C  L  LP +I  +  L+ L+LSGC  
Sbjct: 189 GLSKLDLSNCLQLQCLPESIGQLTHLRELMMDNCDRLKSLPETIGHMVRLRKLHLSGCSA 248

Query: 136 LENVPDTLGKVESLEELDVSGTA------IRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           +  +P +LGK+ +L+EL +S  A      I+ P   + L + LR LY   C+        
Sbjct: 249 VVYIPSSLGKLSNLQELSLSTKALLSNDVIKLPDYLVQLSR-LRELYLHDCS-------- 299

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL- 248
                                                  G  ++P  I+ L +L+ L L 
Sbjct: 300 ---------------------------------------GLESLPCCINKLSNLRILDLK 320

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           N +    LP +I  + +L++L L+ C+ L+ LP+   +L
Sbjct: 321 NCSKLTGLPNNICLMTHLQKLRLKGCRELKCLPEAITDL 359



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 6/174 (3%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +++  +PSSI  LTGL  L L  C  L  LP +I  L  LR L +  C +LK  P+ +  
Sbjct: 175 SALRSIPSSIGALTGLSKLDLSNCLQLQCLPESIGQLTHLRELMMDNCDRLKSLPETIGH 234

Query: 75  MEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNE----CKNLVRLPSSINGLKSLKTLN 129
           M  L KL+L G S +  +PSS+  L  L+ L L+       ++++LP  +  L  L+ L 
Sbjct: 235 MVRLRKLHLSGCSAVVYIPSSLGKLSNLQELSLSTKALLSNDVIKLPDYLVQLSRLRELY 294

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE 182
           L  C  LE++P  + K+ +L  LD+   + +    ++I LM +L+ L   GC E
Sbjct: 295 LHDCSGLESLPCCINKLSNLRILDLKNCSKLTGLPNNICLMTHLQKLRLKGCRE 348



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 2/168 (1%)

Query: 652 EEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           E AD+   ++       DI+E+S +I  L  L +L   GC  LERLP  I AL  L T+N
Sbjct: 111 ESADKTFHVMDAEHLDIDIQEISFSIGRLRSLQELNCRGCDRLERLPENIGALTRLETIN 170

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGT-AIRGLPASIELLSGNILSNLKDCKNLKSLPS 770
           LS  S  R  P    +   L ++ L     ++ LP SI  L+      + +C  LKSLP 
Sbjct: 171 LSLCSALRSIPSSIGALTGLSKLDLSNCLQLQCLPESIGQLTHLRELMMDNCDRLKSLPE 230

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPKMQNDF 818
           TI  +  LR ++ SGCS +  +  +LGK+ +L+  LS   +  + ND 
Sbjct: 231 TIGHMVRLRKLHLSGCSAVVYIPSSLGKLSNLQ-ELSLSTKALLSNDV 277



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 111/228 (48%), Gaps = 10/228 (4%)

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVE 147
           I E+  SI  L  L+ L    C  L RLP +I  L  L+T+NLS C  L ++P ++G + 
Sbjct: 129 IQEISFSIGRLRSLQELNCRGCDRLERLPENIGALTRLETINLSLCSALRSIPSSIGALT 188

Query: 148 SLEELDVSGT-AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL-PFNLLGKSSCPV 205
            L +LD+S    ++    SI  + +LR L    C+   +      H+     L  S C  
Sbjct: 189 GLSKLDLSNCLQLQCLPESIGQLTHLRELMMDNCDRLKSLPETIGHMVRLRKLHLSGCSA 248

Query: 206 ALMLPSLTG-VCSLTKLDLSDCGL---GEAAIPSDIDNLHSLKELYLNR-NNFVTLPASI 260
            + +PS  G + +L +L LS   L       +P  +  L  L+ELYL+  +   +LP  I
Sbjct: 249 VVYIPSSLGKLSNLQELSLSTKALLSNDVIKLPDYLVQLSRLRELYLHDCSGLESLPCCI 308

Query: 261 SGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSLVTLFGAL 305
           + L NL  L+L++C +L  LP    +  +LQ +R  GC  L  L  A+
Sbjct: 309 NKLSNLRILDLKNCSKLTGLPNNICLMTHLQKLRLKGCRELKCLPEAI 356



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           +R +  +I  L GL +L L+ C  L+ LP +I  L +L  L +    + +  PE      
Sbjct: 177 LRSIPSSIGALTGLSKLDLSNCLQLQCLPESIGQLTHLRELMMDNCDRLKSLPETIGHMV 236

Query: 730 QLLEIHLEG-TAIRGLPASIELLSG---------NILSNLKDCKNLKSLPSTINGLRSLR 779
           +L ++HL G +A+  +P+S+  LS           +LSN     ++  LP  +  L  LR
Sbjct: 237 RLRKLHLSGCSAVVYIPSSLGKLSNLQELSLSTKALLSN-----DVIKLPDYLVQLSRLR 291

Query: 780 MMYPSGCSKLKNVTETLGKVESLEV 804
            +Y   CS L+++   + K+ +L +
Sbjct: 292 ELYLHDCSGLESLPCCINKLSNLRI 316



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 38/79 (48%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           LS   L    + ++P  +  L+ L  L L  C  L SLP  I+ L  LR L+L  CSKL 
Sbjct: 267 LSTKALLSNDVIKLPDYLVQLSRLRELYLHDCSGLESLPCCINKLSNLRILDLKNCSKLT 326

Query: 67  KFPQIVASMEDLSKLYLDG 85
             P  +  M  L KL L G
Sbjct: 327 GLPNNICLMTHLQKLRLKG 345



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +  L +LYL D + +  +P  I  L+ L +L LK C  L+ LP  I  +  L+ L L
Sbjct: 284 LVQLSRLRELYLHDCSGLESLPCCINKLSNLRILDLKNCSKLTGLPNNICLMTHLQKLRL 343

Query: 60  SGCSKLKKFPQIVASMED 77
            GC +LK  P+ +  + +
Sbjct: 344 KGCRELKCLPEAITDLSE 361



 Score = 43.5 bits (101), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSS----LPVTISSLKCLR 55
           +  M  L  L+L G S +  +PSS+  L+ L+ L+L     LS+    LP  +  L  LR
Sbjct: 232 IGHMVRLRKLHLSGCSAVVYIPSSLGKLSNLQELSLSTKALLSNDVIKLPDYLVQLSRLR 291

Query: 56  TLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVR 114
            L L  CS L+  P  +  + +L  L L   S +  +P++I L+  L+ L L  C+ L  
Sbjct: 292 ELYLHDCSGLESLPCCINKLSNLRILDLKNCSKLTGLPNNICLMTHLQKLRLKGCRELKC 351

Query: 115 LPSSINGL 122
           LP +I  L
Sbjct: 352 LPEAITDL 359



 Score = 43.1 bits (100), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 9/160 (5%)

Query: 646 NCSRLW---EEADEFPDIVQVLSDGTD-IRELSLAIELLFGLVQLTLNGCKNLERLPRTI 701
           NC +L    E   +   + +++ D  D ++ L   I  +  L +L L+GC  +  +P ++
Sbjct: 197 NCLQLQCLPESIGQLTHLRELMMDNCDRLKSLPETIGHMVRLRKLHLSGCSAVVYIPSSL 256

Query: 702 SALKYLSTLNLSGLSKFR----EFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNIL 756
             L  L  L+LS  +       + P+      +L E++L + + +  LP  I  LS   +
Sbjct: 257 GKLSNLQELSLSTKALLSNDVIKLPDYLVQLSRLRELYLHDCSGLESLPCCINKLSNLRI 316

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            +LK+C  L  LP+ I  +  L+ +   GC +LK + E +
Sbjct: 317 LDLKNCSKLTGLPNNICLMTHLQKLRLKGCRELKCLPEAI 356


>gi|357131658|ref|XP_003567453.1| PREDICTED: putative disease resistance protein RGA3-like
           [Brachypodium distachyon]
          Length = 1402

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 136/299 (45%), Gaps = 23/299 (7%)

Query: 11  YLD---GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
           YLD    +S+ ++P+S+  L+ L  L L GC  L  LP +I  L CL+ L++S C  ++K
Sbjct: 684 YLDLSGNSSLDKLPASLGKLSELSFLNLLGCYILQELPESICELTCLQHLDMSECRAIQK 743

Query: 68  FPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
            P    S+  L+ L L G S       I  L  LE L L+ C  L  LP     L+ L  
Sbjct: 744 LPDEFGSLPKLTFLSLSGCSKLTKLPDIVRLESLEHLNLSNCHELESLPKDFGNLQKLGF 803

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLYFSGCNE---P 183
           LNLS C ++  +P++  ++  L++LD+S           F  +  L SL  + C +    
Sbjct: 804 LNLSDCYRVSVLPESFCQLIQLKDLDLSDCHHLSELPDCFGDLSELDSLNLTSCCKLQLL 863

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
           P S      L +  L  S C     LPS  G   L  LD+S C      +P +I N+ SL
Sbjct: 864 PESFCKLFKLRY--LNLSYCMRLGKLPSSIGDLKLRILDIS-CASSLHFLPDNISNMTSL 920

Query: 244 KELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ-IPPNLQFVRANGCSSLVTL 301
            +L +       LP            +++D KR  +L + I  N+  +    CSS+V L
Sbjct: 921 NQLEVTS----ALPRVFQ--------KVQDIKRDLNLSRLIVHNVHKIYKERCSSIVNL 967



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 126/269 (46%), Gaps = 13/269 (4%)

Query: 20  VPSSI---ELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
           +PSSI   +LL  L+   L     ++SLP +  +L+ ++TL LS CS L+  P  + S+ 
Sbjct: 626 LPSSIHQCKLLRYLDATALP----IASLPKSFHTLQYMQTLILSKCS-LETLPDNICSLH 680

Query: 77  DLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            +  L L G +S+ ++P+S+  L  L  L L  C  L  LP SI  L  L+ L++S C  
Sbjct: 681 KICYLDLSGNSSLDKLPASLGKLSELSFLNLLGCYILQELPESICELTCLQHLDMSECRA 740

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL-P 194
           ++ +PD  G +  L  L +SG +       I  +++L  L  S C+E  +      +L  
Sbjct: 741 IQKLPDEFGSLPKLTFLSLSGCSKLTKLPDIVRLESLEHLNLSNCHELESLPKDFGNLQK 800

Query: 195 FNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NN 252
              L  S C    +LP S   +  L  LDLSDC    + +P    +L  L  L L     
Sbjct: 801 LGFLNLSDCYRVSVLPESFCQLIQLKDLDLSDCH-HLSELPDCFGDLSELDSLNLTSCCK 859

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLP 281
              LP S   L  L  L L  C RL  LP
Sbjct: 860 LQLLPESFCKLFKLRYLNLSYCMRLGKLP 888



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 4/157 (2%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             S+  L+ L L G S +T++P  + L   LE L L  C  L SLP    +L+ L  L L
Sbjct: 748 FGSLPKLTFLSLSGCSKLTKLPDIVRL-ESLEHLNLSNCHELESLPKDFGNLQKLGFLNL 806

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
           S C ++   P+    +  L  L L D   ++E+P     L  L+ L L  C  L  LP S
Sbjct: 807 SDCYRVSVLPESFCQLIQLKDLDLSDCHHLSELPDCFGDLSELDSLNLTSCCKLQLLPES 866

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
              L  L+ LNLS C +L  +P ++G ++ L  LD+S
Sbjct: 867 FCKLFKLRYLNLSYCMRLGKLPSSIGDLK-LRILDIS 902



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 3/157 (1%)

Query: 24   IELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL 83
            ++ L  LE+  ++ C+ L +LP  I     LR L LS    L+  P+ +  +  L +  +
Sbjct: 1203 LQHLPTLEIFQVQSCRGLRALPEAIQYCTSLRNLYLSSLKDLELLPEWLGHLTSLEEFVI 1262

Query: 84   -DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
             D   +   P S++ L  L+++ L +CK L  LP  +  L SL+   +  C  L ++P++
Sbjct: 1263 RDCPIVTFFPESMKNLTALKVISLRDCKGLDILPEWLGQLISLQEFYIIRCANLISLPES 1322

Query: 143  LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            +    +L++L + G +      S+  +  L+ LY  G
Sbjct: 1323 MLNHSTLKKLYIWGCS--SLVESLRNLAALKELYMWG 1357



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 49/185 (26%)

Query: 95   IELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
            ++ LP LE+  +  C+ L  LP +I    SL+ L LS    LE +P+ LG + SLEE   
Sbjct: 1203 LQHLPTLEIFQVQSCRGLRALPEAIQYCTSLRNLYLSSLKDLELLPEWLGHLTSLEE--- 1259

Query: 155  SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLT 213
                        F++++                               CP+    P S+ 
Sbjct: 1260 ------------FVIRD-------------------------------CPIVTFFPESMK 1276

Query: 214  GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEELELE 272
             + +L  + L DC  G   +P  +  L SL+E Y+ R  N ++LP S+     L++L + 
Sbjct: 1277 NLTALKVISLRDCK-GLDILPEWLGQLISLQEFYIIRCANLISLPESMLNHSTLKKLYIW 1335

Query: 273  DCKRL 277
             C  L
Sbjct: 1336 GCSSL 1340



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 4/138 (2%)

Query: 20   VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
            +P +I+  T L  L L   K+L  LP  +  L  L    +  C  +  FP+ + ++  L 
Sbjct: 1223 LPEAIQYCTSLRNLYLSSLKDLELLPEWLGHLTSLEEFVIRDCPIVTFFPESMKNLTALK 1282

Query: 80   KLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLEN 138
             + L D   +  +P  +  L  L+  Y+  C NL+ LP S+    +LK L + GC  L  
Sbjct: 1283 VISLRDCKGLDILPEWLGQLISLQEFYIIRCANLISLPESMLNHSTLKKLYIWGCSSL-- 1340

Query: 139  VPDTLGKVESLEELDVSG 156
              ++L  + +L+EL + G
Sbjct: 1341 -VESLRNLAALKELYMWG 1357



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 670 IRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD 729
           ++EL  +I  L  L  L ++ C+ +++LP    +L  L+ L+LSG SK  + P+I   R 
Sbjct: 717 LQELPESICELTCLQHLDMSECRAIQKLPDEFGSLPKLTFLSLSGCSKLTKLPDIV--RL 774

Query: 730 QLLEIHLEGT---AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGC 786
           + LE HL  +    +  LP     L      NL DC  +  LP +   L  L+ +  S C
Sbjct: 775 ESLE-HLNLSNCHELESLPKDFGNLQKLGFLNLSDCYRVSVLPESFCQLIQLKDLDLSDC 833

Query: 787 SKLKNVTETLGKVESLE 803
             L  + +  G +  L+
Sbjct: 834 HHLSELPDCFGDLSELD 850



 Score = 44.3 bits (103), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 2/124 (1%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EG 738
           L  +  L L+G  +L++LP ++  L  LS LNL G    +E PE       L  + + E 
Sbjct: 679 LHKICYLDLSGNSSLDKLPASLGKLSELSFLNLLGCYILQELPESICELTCLQHLDMSEC 738

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            AI+ LP     L      +L  C  L  LP  +  L SL  +  S C +L+++ +  G 
Sbjct: 739 RAIQKLPDEFGSLPKLTFLSLSGCSKLTKLPDIVR-LESLEHLNLSNCHELESLPKDFGN 797

Query: 799 VESL 802
           ++ L
Sbjct: 798 LQKL 801



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 2/94 (2%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D   +T  P S++ LT L++++L+ CK L  LP  +  L  L+   +  C+ L   P+ +
Sbjct: 1264 DCPIVTFFPESMKNLTALKVISLRDCKGLDILPEWLGQLISLQEFYIIRCANLISLPESM 1323

Query: 73   ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL 106
             +   L KLY+ G S   +  S+  L  L+ LY+
Sbjct: 1324 LNHSTLKKLYIWGCS--SLVESLRNLAALKELYM 1355



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 1/110 (0%)

Query: 688  LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGL-PA 746
            +  C+ L  LP  I     L  L LS L      PE       L E  +    I    P 
Sbjct: 1214 VQSCRGLRALPEAIQYCTSLRNLYLSSLKDLELLPEWLGHLTSLEEFVIRDCPIVTFFPE 1273

Query: 747  SIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            S++ L+   + +L+DCK L  LP  +  L SL+  Y   C+ L ++ E++
Sbjct: 1274 SMKNLTALKVISLRDCKGLDILPEWLGQLISLQEFYIIRCANLISLPESM 1323



 Score = 39.7 bits (91), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNI 755
           LP++   L+Y+ TL LS  S     P+   S  ++  + L G +++  LPAS+  LS   
Sbjct: 649 LPKSFHTLQYMQTLILSKCS-LETLPDNICSLHKICYLDLSGNSSLDKLPASLGKLSELS 707

Query: 756 LSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
             NL  C  L+ LP +I  L  L+ +  S C  ++ + +  G +  L
Sbjct: 708 FLNLLGCYILQELPESICELTCLQHLDMSECRAIQKLPDEFGSLPKL 754


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 34/300 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPNEIEQLKNLQVLDL- 169

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 170 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 228

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 229 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 287

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
                P           L L +N L         +LP   G + +L  LDL +  L    
Sbjct: 288 QLITLPKEIEQLKNLKSLDLSYNQLT--------ILPKEVGQLENLQTLDLRNNQL--KT 337

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL------------ELEDCKRLQSL 280
           +P +I+ L +L+ L+L+ N   TLP  I  L NL  L            E+E  K LQ+L
Sbjct: 338 LPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTL 397



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 52/273 (19%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +   IE L  L+ L L   + L++LP  I  LK L++L LS
Sbjct: 181 IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIEQLKNLKSLYLS 239

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++   FP+ +  +++L  L+L+   I  +P+ I  L  L+ LYL++ + L+ LP  I 
Sbjct: 240 E-NQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ-LITLPKEIE 297

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L+LS   +L  +P  +G++E+L+ LD+    ++     I  +KNL++L+ S  
Sbjct: 298 QLKNLKSLDLS-YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 356

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                                LT             +P +I  L
Sbjct: 357 ------------------------------------QLT------------TLPQEIGQL 368

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +L  L L  N   TLP  I  L NL+ L L +
Sbjct: 369 QNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 401



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 7/220 (3%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 50  RVLDLSR-QELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 107

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP+ I  LK+L+ L+L G  +L  +P  + ++++L+ L +    +    + I  +KNL+ 
Sbjct: 108 LPNEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQV 166

Query: 175 LYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           L   G N+          L    LL   S  +  +   +  + +L  LDLS+  L    +
Sbjct: 167 LDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQL--TTL 223

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
           P++I+ L +LK LYL+ N F T P  I  L NL+ L L +
Sbjct: 224 PNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNN 263


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 18/300 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  L L    +T VP+ I  L  L +L L   + L+SLP  I  L  L+ L L 
Sbjct: 48  IGQLTSLVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQ-LTSLPAEIGLLTALQELYLY 106

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  +  +  L KL LD   +  VP+ I  L  LE+L L + + L  +P+ I 
Sbjct: 107 G-NQLTSVPAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQ-LTSVPAEIG 164

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL    LSG  +L +VP  +G + SL EL +SG  +    + I  + +L+ L+    
Sbjct: 165 QLASLTESGLSGN-RLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDD- 222

Query: 181 NE----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
           NE    P  +      +  +L       V   +  LT + SL        G    ++P++
Sbjct: 223 NELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYL-----YGNQLTSVPAE 277

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           I  L  L EL+L+ N   ++PA I  L +LE+L L+D K    L  +P  ++ +RA GC+
Sbjct: 278 IGQLTLLTELFLDDNELTSVPAEIGQLRSLEKLYLDDNK----LTSVPAEIRELRAAGCN 333



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 10/270 (3%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           L+L         P  +  +  L +L +   ++  +P  I  L  L  L L E + L  +P
Sbjct: 10  LDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQ-LTSVP 68

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           + I  L SL+ L+LS   +L ++P  +G + +L+EL + G  +    + I+ + +LR L 
Sbjct: 69  AEIGQLASLRVLDLSDN-QLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLL 127

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
                     A         +LG +   +  +   +  + SLT+  LS   L  A++P++
Sbjct: 128 LDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRL--ASVPAE 185

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVR 291
           I  L SL EL+L+ N   ++PA I  L +L+EL L+D   L S+P+    L       +R
Sbjct: 186 IGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDD-NELTSVPEETGQLASLMVLSLR 244

Query: 292 ANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
            N  +S+    G L   +S Y   N + S+
Sbjct: 245 DNELTSVPAEVGQLTSLKSLYLYGNQLTSV 274


>gi|297818518|ref|XP_002877142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322980|gb|EFH53401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 47/284 (16%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           ++L  L +  + + ++   +  LTGL+ + L G KNL  +P  +S    L  L L+ CS 
Sbjct: 608 ENLVKLVMRWSKLEKLWDGVHPLTGLKEINLWGSKNLIEIP-DLSMATNLEKLVLNDCS- 665

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
                                 S+ E+PSSI+ L  L   ++  C+NL  LP+ IN L+S
Sbjct: 666 ----------------------SLMEIPSSIQYLNELYDFHMERCENLEILPTGIN-LQS 702

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L  LNL GC +L++ PD    + +   LD+ GT I    S++ L +NL +L      E  
Sbjct: 703 LYDLNLMGCSRLKSFPDISSNIST---LDLYGTTIEELPSNLHL-ENLVNLRMC---EMR 755

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           +   W    P   L K   P            SLT++ LS+       +PS I NLH L+
Sbjct: 756 SGKLWEREQPLTPLLKMVSP------------SLTRIYLSNIP-TLVELPSSIHNLHKLE 802

Query: 245 ELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNL 287
           EL + N  N  TLP  I+ L +L  L+L  C +L+  P I  N+
Sbjct: 803 ELSIWNCKNLETLPTGIN-LKSLYSLDLSGCSQLRCFPDISTNI 845



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 108/241 (44%), Gaps = 67/241 (27%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D +S+ E+PSSI+ L  L    ++ C+NL  LP  I+ L+ L  L L GCS+LK FP I 
Sbjct: 663 DCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGIN-LQSLYDLNLMGCSRLKSFPDIS 721

Query: 73  ASME--------------------------------------------------DLSKLY 82
           +++                                                    L+++Y
Sbjct: 722 SNISTLDLYGTTIEELPSNLHLENLVNLRMCEMRSGKLWEREQPLTPLLKMVSPSLTRIY 781

Query: 83  LDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPD 141
           L    ++ E+PSSI  L  LE L +  CKNL  LP+ IN LKSL +L+LSGC +L   PD
Sbjct: 782 LSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLPTGIN-LKSLYSLDLSGCSQLRCFPD 840

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC--------NEPPASASWHLHL 193
                 ++ EL ++ TAI       + ++N  +L F  C        N  P S + + HL
Sbjct: 841 I---STNISELFLNETAIEEVP---WWIENFINLSFINCGELSEVILNNSPTSVTNNTHL 894

Query: 194 P 194
           P
Sbjct: 895 P 895



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 5/108 (4%)

Query: 7   LSDLYLDGT-SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           L+ +YL    ++ E+PSSI  L  LE L++  CKNL +LP  I +LK L +L+LSGCS+L
Sbjct: 777 LTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLPTGI-NLKSLYSLDLSGCSQL 835

Query: 66  KKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           + FP I     ++S+L+L+ T+I EVP  IE    L  +   E   ++
Sbjct: 836 RCFPDIST---NISELFLNETAIEEVPWWIENFINLSFINCGELSEVI 880



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 59/182 (32%)

Query: 663 VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFP 722
           VL+D + + E+  +I+ L  L    +  C+NLE LP  I+ L+ L  LNL G S+ + FP
Sbjct: 660 VLNDCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGIN-LQSLYDLNLMGCSRLKSFP 718

Query: 723 EITSSRDQLLEIHLEGTAIRGLPASI-----------ELLSGNI---------------- 755
           +I+S+   L    L GT I  LP+++           E+ SG +                
Sbjct: 719 DISSNISTL---DLYGTTIEELPSNLHLENLVNLRMCEMRSGKLWEREQPLTPLLKMVSP 775

Query: 756 ------LSNLK---------------------DCKNLKSLPSTINGLRSLRMMYPSGCSK 788
                 LSN+                      +CKNL++LP+ IN L+SL  +  SGCS+
Sbjct: 776 SLTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLPTGIN-LKSLYSLDLSGCSQ 834

Query: 789 LK 790
           L+
Sbjct: 835 LR 836



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 5/93 (5%)

Query: 658 PDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLS 716
           P + ++ LS+   + EL  +I  L  L +L++  CKNLE LP  I+ LK L +L+LSG S
Sbjct: 775 PSLTRIYLSNIPTLVELPSSIHNLHKLEELSIWNCKNLETLPTGIN-LKSLYSLDLSGCS 833

Query: 717 KFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           + R FP+I+++   + E+ L  TAI  +P  IE
Sbjct: 834 QLRCFPDISTN---ISELFLNETAIEEVPWWIE 863



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 2/123 (1%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAI 741
            LV+L +   K LE+L   +  L  L  +NL G     E P+++ + +    +  + +++
Sbjct: 609 NLVKLVMRWSK-LEKLWDGVHPLTGLKEINLWGSKNLIEIPDLSMATNLEKLVLNDCSSL 667

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             +P+SI+ L+     +++ C+NL+ LP+ IN L+SL  +   GCS+LK+  +    + +
Sbjct: 668 MEIPSSIQYLNELYDFHMERCENLEILPTGIN-LQSLYDLNLMGCSRLKSFPDISSNIST 726

Query: 802 LEV 804
           L++
Sbjct: 727 LDL 729


>gi|115442109|ref|NP_001045334.1| Os01g0937300 [Oryza sativa Japonica Group]
 gi|113534865|dbj|BAF07248.1| Os01g0937300, partial [Oryza sativa Japonica Group]
          Length = 854

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 107/193 (55%), Gaps = 9/193 (4%)

Query: 11  YLD---GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
           YLD    +++ ++PSS+  L  L  L L GC  L  LP +I++LKCL+ L++SGC  L+K
Sbjct: 664 YLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQK 723

Query: 68  FPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            P    S+  LS + L   S + ++P S+  L  LE L L++C  L +LP  +  L  L+
Sbjct: 724 LPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYRLE 782

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L++S C +++ +P T  +++ L+ L++S     I+ P      +  L+SL  + C++  
Sbjct: 783 VLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLP-ECFGDLSELQSLNLTSCSK-L 840

Query: 185 ASASWHLHLPFNL 197
            S  W L   FNL
Sbjct: 841 QSLPWSLCNMFNL 853



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 28/262 (10%)

Query: 44  LPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           LP +I  L  L  L++SG   +   P+   +++++  L L   S+  +P++I  L  L  
Sbjct: 606 LPSSIRRLMLLGYLDVSGFPIIS-LPKSFHTLQNMQSLILSNCSLEILPANIGSLQKLCY 664

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L L+   NL +LPSS+  L  L  LNLSGC KLE +P+++  ++ L+ LD+SG    +  
Sbjct: 665 LDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKL 724

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
              F   +L  L F                  NL   SSC     LP    + SL  L L
Sbjct: 725 PGKF--GSLAKLSF-----------------VNL---SSCSKLTKLPDSLNLESLEHLIL 762

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQ 282
           SDC   E  +P D+ NL+ L+ L ++    V  LP +   L +L+ L L DC  L  LP+
Sbjct: 763 SDCHELE-QLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDCHGLIQLPE 821

Query: 283 IPPN---LQFVRANGCSSLVTL 301
              +   LQ +    CS L +L
Sbjct: 822 CFGDLSELQSLNLTSCSKLQSL 843



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 101/181 (55%), Gaps = 3/181 (1%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           +++++  L L   S+  +P++I  L  L  L L    NL+ LP +++ L  L  L LSGC
Sbjct: 635 TLQNMQSLILSNCSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGC 694

Query: 63  SKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           +KL++ P+ + +++ L  L + G  ++ ++P     L  L  + L+ C  L +LP S+N 
Sbjct: 695 AKLEELPESINNLKCLQHLDISGCCALQKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN- 753

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSGC 180
           L+SL+ L LS C +LE +P+ LG +  LE LD+S     +     F  +K+L+ L  S C
Sbjct: 754 LESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHLKYLNLSDC 813

Query: 181 N 181
           +
Sbjct: 814 H 814



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           L  L L+   NL +LP +++ L  L  LNLSG +K  E PE  ++   L  + + G  A+
Sbjct: 662 LCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCAL 721

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
           + LP     L+     NL  C  L  LP ++N L SL  +  S C +L+ + E LG +  
Sbjct: 722 QKLPGKFGSLAKLSFVNLSSCSKLTKLPDSLN-LESLEHLILSDCHELEQLPEDLGNLYR 780

Query: 802 LEV 804
           LEV
Sbjct: 781 LEV 783



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 2/141 (1%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  +++ +L  ++  L  L  L L+GC  LE LP +I+ LK L  L++SG    ++ P 
Sbjct: 667 LSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPG 726

Query: 724 ITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMY 782
              S  +L  ++L   + +  LP S+ L S   L  L DC  L+ LP  +  L  L ++ 
Sbjct: 727 KFGSLAKLSFVNLSSCSKLTKLPDSLNLESLEHLI-LSDCHELEQLPEDLGNLYRLEVLD 785

Query: 783 PSGCSKLKNVTETLGKVESLE 803
            S C +++ + +T  +++ L+
Sbjct: 786 MSDCYRVQVLPKTFCQLKHLK 806



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 13/126 (10%)

Query: 198 LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN-NFVTL 256
           L  S  P+  +  S   + ++  L LS+C L    +P++I +L  L  L L+RN N   L
Sbjct: 619 LDVSGFPIISLPKSFHTLQNMQSLILSNCSL--EILPANIGSLQKLCYLDLSRNSNLNKL 676

Query: 257 PASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL---FGALKLCRS 310
           P+S++ L+ L  L L  C +L+ LP+   N   LQ +  +GC +L  L   FG+L    +
Sbjct: 677 PSSVTDLVELYFLNLSGCAKLEELPESINNLKCLQHLDISGCCALQKLPGKFGSL----A 732

Query: 311 KYTIIN 316
           K + +N
Sbjct: 733 KLSFVN 738



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 686 LTLNGCKNLER-------LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG 738
           L L+G  N E+       LP +I  L  L  L++SG       P+   +   +  + L  
Sbjct: 588 LDLSGLSNEEQSTPSNPVLPSSIRRLMLLGYLDVSGFPII-SLPKSFHTLQNMQSLILSN 646

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
            ++  LPA+I  L      +L    NL  LPS++  L  L  +  SGC+KL+ + E++  
Sbjct: 647 CSLEILPANIGSLQKLCYLDLSRNSNLNKLPSSVTDLVELYFLNLSGCAKLEELPESINN 706

Query: 799 VESLE 803
           ++ L+
Sbjct: 707 LKCLQ 711


>gi|410451628|ref|ZP_11305630.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014394|gb|EKO76524.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 350

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 10/281 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L L     T +P  I  L  L+ L+L+  + L SLP  I  L+ L+ L+L 
Sbjct: 57  IGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNR-LESLPKEIGRLQNLQNLDLI 115

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L+  P+ +  +++L +LYL    +  +P  I  L  L+ LYL+  + L      I 
Sbjct: 116 -YNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIGTLQNLKGLYLSNSR-LTTFLQEIG 173

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L++LK L+LS   +L   P  +G+++ LEEL +  T +   +  I  ++NL+ L  S  
Sbjct: 174 TLQNLKELSLS-STQLTTFPKEIGQLQKLEELYLPSTQLVTLSKEIGQLQNLKLLDLSDN 232

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                P        L +  L  +   +  +   + G+  + KL+L++  L    +P  I 
Sbjct: 233 QFTTFPKEIGKLRKLEYLFLEHNR--LTTLSEEIVGLQKIVKLNLANNQL--RTLPQGIG 288

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
            L SLK+L L+ N F T P  I GL +L+ L LE+   L S
Sbjct: 289 QLQSLKDLNLSGNPFTTFPQEIVGLKHLKRLVLENIPTLLS 329



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 29/195 (14%)

Query: 103 LLYLNECKNLVRLPSSINGLKSLKTLNLSG----------------------CCKLENVP 140
           +LYL E   L  LP  I  L+ L+ LNL                          +LE++P
Sbjct: 42  ILYL-ESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLESLP 100

Query: 141 DTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG- 199
             +G++++L+ LD+    +      I  ++NL+ LY    +    +    +    NL G 
Sbjct: 101 KEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYL--VDNHLTTLPQEIGTLQNLKGL 158

Query: 200 -KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPA 258
             S+  +   L  +  + +L +L LS   L     P +I  L  L+ELYL     VTL  
Sbjct: 159 YLSNSRLTTFLQEIGTLQNLKELSLSSTQL--TTFPKEIGQLQKLEELYLPSTQLVTLSK 216

Query: 259 SISGLLNLEELELED 273
            I  L NL+ L+L D
Sbjct: 217 EIGQLQNLKLLDLSD 231



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
             +P +I  L  L+EL L  N F  LP  I  L NL+ L LE   RL+SLP+    LQ +
Sbjct: 51  TTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLE-SNRLESLPKEIGRLQNL 109

Query: 291 R-----ANGCSSLVTLFGALKLCRSKYTIINCIDSL 321
           +      N   SL    G L+  +  Y + N + +L
Sbjct: 110 QNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTL 145


>gi|357519065|ref|XP_003629821.1| Resistance protein [Medicago truncatula]
 gi|355523843|gb|AET04297.1| Resistance protein [Medicago truncatula]
          Length = 780

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 164/451 (36%), Gaps = 134/451 (29%)

Query: 9   DLYLDGTSITEVP----SSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           D +    +I ++P    +S++L   L++L       L+ +P  +SSL  L T     C K
Sbjct: 373 DFHPKKPAIIKLPKSCLTSLKLTDLLKILNFDDADCLTEIP-DVSSLLNLETFSFEYCEK 431

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           L                         +  S+  L  L++L    C  L R P     LKS
Sbjct: 432 L-----------------------ITIHESVGFLDKLKVLSAKGCSKLRRFPPI--KLKS 466

Query: 125 LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
           L+ LNLS C  L+N P  L K E++ EL +  T I+    S   +  L++L    C    
Sbjct: 467 LEQLNLSFCKSLKNFPQILWKKENITELGLEETPIKEFPCSFQSLTRLQTLQLHYCGT-- 524

Query: 185 ASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS-------------------------LT 219
                   LP N+          M+P+L  + +                         + 
Sbjct: 525 ------FRLPNNIF---------MMPNLVNITAWKSQGWILPKQDEGEQRDISIVSSNVE 569

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
           +L L  C L +   PS +    ++KEL L  NNF  LP  I     L +L L+ C+ LQ 
Sbjct: 570 RLHLIFCILSDDFFPSGLTWFRNVKELSLAHNNFTILPECIQECHFLTDLNLDYCQYLQE 629

Query: 280 LPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLE 339
           +  I PNL+   A+ C S                   CID L     +G   +M   YL 
Sbjct: 630 VRGIVPNLEIFSASHCRSWT-----------------CIDMLLNQELHGNRNTMF--YL- 669

Query: 340 LQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPK 399
                          PG++I  WF +++ G SI+      L+  NK    A+C       
Sbjct: 670 ---------------PGARILNWFEHRSSGQSIS------LWFRNKFPAIALCFAI---- 704

Query: 400 HSTGTYLFHSYPAHELECSMDGSGEGHYIYF 430
                            CS    G G YIYF
Sbjct: 705 -----------------CSQFLDGTGSYIYF 718



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 32/189 (16%)

Query: 632 GRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGC 691
           G++ VR +SP+EPG  SRLW       DI+QVL + T     + AI+ ++ + +      
Sbjct: 275 GKEIVRLESPEEPGKRSRLWSHE----DIIQVLEENTG----TSAIKTIYLMCE------ 320

Query: 692 KNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLE------------IHLEGT 739
             +E        +K L TL + G   F + P+   +  + +E             H +  
Sbjct: 321 DEVELDEMVFKKMKTLKTLTIKG-GHFSKGPKHLPNSLRAVEWWRYPSEYLPYDFHPKKP 379

Query: 740 AIRGLP----ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           AI  LP     S++L     + N  D   L  +P  ++ L +L       C KL  + E+
Sbjct: 380 AIIKLPKSCLTSLKLTDLLKILNFDDADCLTEIPD-VSSLLNLETFSFEYCEKLITIHES 438

Query: 796 LGKVESLEV 804
           +G ++ L+V
Sbjct: 439 VGFLDKLKV 447



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 13/132 (9%)

Query: 651 WEEAD---EFPDIVQVLSDGT-------DIRELSLAIELLFGLVQLTLNGCKNLERLPRT 700
           +++AD   E PD+  +L+  T        +  +  ++  L  L  L+  GC  L R P  
Sbjct: 403 FDDADCLTEIPDVSSLLNLETFSFEYCEKLITIHESVGFLDKLKVLSAKGCSKLRRFPPI 462

Query: 701 ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLK 760
              LK L  LNLS     + FP+I   ++ + E+ LE T I+  P S + L+      L 
Sbjct: 463 --KLKSLEQLNLSFCKSLKNFPQILWKKENITELGLEETPIKEFPCSFQSLTRLQTLQLH 520

Query: 761 DCKNLKSLPSTI 772
            C   + LP+ I
Sbjct: 521 YCGTFR-LPNNI 531


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 7/292 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL    +  +P  IE L  L+ L L   + L++LP  I  L+ L  L L 
Sbjct: 302 IEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQ-LTTLPKEIGKLQKLEALHLE 360

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P  I  L  L+ L+L E   L  LP  I 
Sbjct: 361 N-NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHL-ENNQLTTLPKEIG 418

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P+ + K++ L++L  SG         I+ ++NL++L     
Sbjct: 419 KLQNLQELRLD-YNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSN 477

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           LL  S   +A +   +  + +L  L LSD  L    +P +I  L
Sbjct: 478 QLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQL--TTLPKEIGKL 535

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
            +L+ELYL  N   TLP  I  L NL+ L L +  RL +LP+   NLQ ++ 
Sbjct: 536 QNLQELYLRDNQLTTLPKEIGNLQNLQVLNL-NHNRLTTLPKEIGNLQNLQV 586



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 145/293 (49%), Gaps = 9/293 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L L    +T +P  IE L  L+ L L   + L++LP  I  L+ L+ L L+
Sbjct: 279 IGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNR-LANLPEEIEKLQNLQWLGLN 337

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  ++ L  L+L+   +  +P  I  L  L+ L L+  + L  LP  I 
Sbjct: 338 N-NQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQ-LTTLPKEIG 395

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L+L    +L  +P  +GK+++L+EL +    +      I  ++ L+ LY SG 
Sbjct: 396 KLQHLQELHLENN-QLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGN 454

Query: 181 NEPPASAS-WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                    W+L      L   S  +  +   +  + +L  L LSD  L  A +P +I  
Sbjct: 455 QFTTVPEEIWNLQ-NLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQL--ATLPKEIGK 511

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           L +L+ LYL+ N   TLP  I  L NL+EL L D  +L +LP+   NLQ ++ 
Sbjct: 512 LQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRD-NQLTTLPKEIGNLQNLQV 563



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 134/297 (45%), Gaps = 32/297 (10%)

Query: 20  VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           +P  I  L  L  L L     L+ LP  I  L+ L+ L L+  ++L   P+ +  +++L 
Sbjct: 160 LPKEIGKLQNLRDLDL-SSNQLTILPKEIGKLQNLQKLNLTR-NRLANLPEEIGKLQNLQ 217

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
           +L+L    +A +P  I  L  L++L L     L  LP  I  L+ L+ L L G  +   +
Sbjct: 218 ELHLTRNRLANLPEEIGKLQNLQILNLG-VNQLTTLPKEIGNLQKLQELYL-GDNQFATL 275

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPP-----ASASWHL 191
           P  +GK++ L+ELD+    +      I  ++ L+ LY       N P       +  W L
Sbjct: 276 PKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQW-L 334

Query: 192 HLPFNLL-------GKSSCPVAL--------MLPSLTG-VCSLTKLDLSDCGLGEAAIPS 235
            L  N L       GK     AL         LP   G + +L  L LS+  L    +P 
Sbjct: 335 GLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQL--TTLPK 392

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +I  L  L+EL+L  N   TLP  I  L NL+EL L D  RL +LP+    LQ ++ 
Sbjct: 393 EIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRL-DYNRLTTLPEEIEKLQKLKK 448



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 21/289 (7%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  L+L+   +T +P  I  L  L+ L L   + L++LP  I  L+ L+ L L 
Sbjct: 348 IGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQ-LTTLPKEIGKLQHLQELHLE 406

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L +L LD   +  +P  IE L  L+ LY +       +P  I 
Sbjct: 407 N-NQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLY-SSGNQFTTVPEEIW 464

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L++L+ LNL    +L ++P  +G +++L+ L +S   +      I  ++NL+ LY S  
Sbjct: 465 NLQNLQALNLY-SNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN 523

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
                P           L+L  N L  ++ P       +  + +L  L+L+   L    +
Sbjct: 524 QLTTLPKEIGKLQNLQELYLRDNQL--TTLP-----KEIGNLQNLQVLNLNHNRL--TTL 574

Query: 234 PSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           P +I NL +L+ L LN N   TLP  I  L NL+ L L D  +L +LP+
Sbjct: 575 PKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHL-DNNQLTTLPE 622



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 25/201 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCK--------------------- 39
           +  ++ L  LY  G   T VP  I  L  L+ L L   +                     
Sbjct: 440 IEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSD 499

Query: 40  -NLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
             L++LP  I  L+ L+ L LS  ++L   P+ +  +++L +LYL    +  +P  I  L
Sbjct: 500 NQLATLPKEIGKLQNLQLLYLSD-NQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNL 558

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
             L++L LN  + L  LP  I  L++L+ LNL+   +L  +P+ +GK+++L+ L +    
Sbjct: 559 QNLQVLNLNHNR-LTTLPKEIGNLQNLQVLNLN-HNRLTTLPEEIGKLQNLQLLHLDNNQ 616

Query: 159 IRRPTSSIFLMKNLRSLYFSG 179
           +      I  ++NL+ L   G
Sbjct: 617 LTTLPEEIGKLQNLKELDLVG 637



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 3/107 (2%)

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           LP+ I  L+ L  LNL+  ++    PE       L E+HL    +  LP  I  L    +
Sbjct: 183 LPKEIGKLQNLQKLNLTR-NRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQI 241

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            NL     L +LP  I  L+ L+ +Y  G ++   + + +GK++ L+
Sbjct: 242 LNL-GVNQLTTLPKEIGNLQKLQELY-LGDNQFATLPKAIGKLQKLQ 286


>gi|15237516|ref|NP_198907.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177970|dbj|BAB11353.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007232|gb|AED94615.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1104

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 175/376 (46%), Gaps = 57/376 (15%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           M++L  L     S++ +   +E L  L LL   G     SLP+T    +CL  L + G S
Sbjct: 541 MRNLKFLNFYNGSVS-LLEDMEYLPRLRLLYW-GSYPRKSLPLTFKP-ECLVELYM-GFS 596

Query: 64  KLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
           KL+K    +  + +L K+ L  +S + E+P+ +     L+ L L  C++LV +PSSI  L
Sbjct: 597 KLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSIWNL 655

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-- 180
           + L+ L  SGC KL+ +P  +  + SLEE+++S  +  R    I    N++ LY +G   
Sbjct: 656 QKLEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDI--SSNIKRLYVAGTMI 712

Query: 181 NEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
            E PAS   H   L F  +G  S      +P      S+T LDL +         SDI  
Sbjct: 713 KEFPASIVGHWCRLDFLQIGSRSLKRLTHVPE-----SVTHLDLRN---------SDIK- 757

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLV 299
                           +P  + GL +L  L +E+C +L S+    P+L  + A+ C SL 
Sbjct: 758 ---------------MIPDCVIGLPHLVSLLVENCTKLVSIQGHSPSLVTLFADHCISLK 802

Query: 300 TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQI 359
           ++  +     SK    NC   LKL +++   I           +   G+K SI  PG +I
Sbjct: 803 SVCCSFHGPISKLMFYNC---LKLDKESKRGI-----------IQQSGNK-SICLPGKEI 847

Query: 360 PKWFMYQNEGSSITVT 375
           P  F +Q  G+ IT++
Sbjct: 848 PAEFTHQTIGNLITIS 863



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L  +GC  L+ +P  I+ L  L  +N+S  S+ R FP+I+S+  +L   ++ GT I+
Sbjct: 658 LEMLYASGCIKLQVIPTNIN-LASLEEVNMSNCSRLRSFPDISSNIKRL---YVAGTMIK 713

Query: 743 GLPASI 748
             PASI
Sbjct: 714 EFPASI 719



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 25/129 (19%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L + G   LE+L   I  L  L  +NL   S  +E P ++           + T ++
Sbjct: 588 LVELYM-GFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLS-----------KATNLK 635

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L              L  C++L  +PS+I  L+ L M+Y SGC KL+ +   +      
Sbjct: 636 TL-------------TLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLE 682

Query: 803 EVRLSSWNR 811
           EV +S+ +R
Sbjct: 683 EVNMSNCSR 691


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 12/277 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L G  +  +P     L  L++L L   + L +LP     LK L+ L LS
Sbjct: 163 IGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQ-LKTLPKEFGDLKSLQVLYLS 221

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  P+ +  ++ L +L L    +  +P  I  L  L++L L+    L +LP    
Sbjct: 222 N-NQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLS-YNQLKKLPKEFG 279

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            LKSL+ L LS   +L   P+ +G++++L EL +S   +    + I  ++NL  LY S  
Sbjct: 280 KLKSLQKLYLSNY-QLTTFPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNN 338

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L   +L  +       +P+  G + +L  L L++  L    IP++I
Sbjct: 339 QLQALPKKIEKLKNLQVLILNNNQLTT---IPNEIGELKNLQVLTLNNNQL--TTIPNEI 393

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
             L +L+EL L+RN    LP  I  L NL+EL L+D 
Sbjct: 394 GELKNLRELNLSRNQLQALPKEIGHLKNLQELYLDDI 430



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 34/209 (16%)

Query: 77  DLSKLYLDGTSIAEVPSSIELLPGLELL--YLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
           D+  LYL+   +  +P  I  L  L  L  Y N+ K    +P  I  L++L+ L+L+   
Sbjct: 99  DVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLK---AIPKEIGKLQNLQKLDLNHN- 154

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           +L+ +P  +GK+++L+EL + G  ++        +K+L+ LY S                
Sbjct: 155 QLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSN--------------- 199

Query: 195 FNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNF 253
            N L          LP   G + SL  L LS+  L    +P +I  L  L+EL L  N  
Sbjct: 200 -NQLK--------TLPKEFGDLKSLQVLYLSNNQL--KTLPKEIRKLKKLQELALYNNQL 248

Query: 254 VTLPASISGLLNLEELELEDCKRLQSLPQ 282
            TLP  I  L NL+ L L    +L+ LP+
Sbjct: 249 KTLPKEIGKLQNLQVLGL-SYNQLKKLPK 276


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S++ L+ LY++   +T +P  IE L  L LL++ G   L+ +P  I  L  L  L +S
Sbjct: 77  IGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICG-NQLTEVPSGIYLLPNLEFLVVS 135

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL  F   V  ++ L KL+++G  + EVP+ +  LP LELL ++  K L   P  + 
Sbjct: 136 N-NKLTAFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNK-LSTFPPGVE 193

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L ++   +L   P  +  + +L  L+VS   IRR    +  +  L++L   GC
Sbjct: 194 KLQKLRELYINDN-QLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSVRGC 252

Query: 181 --NEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
             +E P      L L    +L    C   ++   +  +  L  L L    L    +PS +
Sbjct: 253 QFDEFPRQV---LQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLL--RTLPSTM 307

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            ++H+L+E+YL+ N F T P  +  L  +E+L++ +
Sbjct: 308 SHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISN 343



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 43/312 (13%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           ++ L +LY++   +TE PS +  L  L +L +     +  LP  ++ L  L+TL + GC 
Sbjct: 195 LQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSN-NPIRRLPDDVTQLTRLKTLSVRGC- 252

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-LPSSINGL 122
           +  +FP+ V  ++ L  LY  G     VP  +  L  L++L L+  KNL+R LPS+++ +
Sbjct: 253 QFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALD--KNLLRTLPSTMSHM 310

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--C 180
            +L+ + L G  K    P+ L ++ ++E+LD+S   I R  +++     L  L  SG   
Sbjct: 311 HNLREVYLHGN-KFNTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLEVLDVSGNPL 369

Query: 181 NEPPASASWH------------------------LHLPFNLLGKSSCPVALMLPSLTGVC 216
             PP                              L +     G +S P  +       + 
Sbjct: 370 TYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVF-----DIT 424

Query: 217 SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKR 276
            L  LD+S+  L   +IP  I  LH L  L+ + N   +LP +I+ +L L  L + D K 
Sbjct: 425 DLEVLDVSNNEL--TSIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLELTHLFINDNK- 481

Query: 277 LQSLPQIPPNLQ 288
              L   PP ++
Sbjct: 482 ---LSTFPPGVE 490



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 137/302 (45%), Gaps = 28/302 (9%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           + DL  L +    +T +P +I  L  L  L   G   L+SL   I SL+ L  L ++  +
Sbjct: 34  ITDLEVLDVSKNKLTSIPEAIGRLRKLSRLHADG-NMLTSLQQAIGSLQKLTHLYVNR-N 91

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           KL   P  +  ++ L+ L + G  + EVPS I LLP LE L ++  K L      +  LK
Sbjct: 92  KLTNLPPGIEKLQKLTLLSICGNQLTEVPSGIYLLPNLEFLVVSNNK-LTAFNPGVEKLK 150

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
            L+ L ++G  +L  VP  +  + +LE LDV    +      +  ++ LR LY +  N+ 
Sbjct: 151 KLRKLFING-NQLTEVPAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYIND-NQL 208

Query: 184 PASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA---------- 232
             + S    LP   +L  S+ P+  +   +T +  L  L +  C   E            
Sbjct: 209 TEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLV 268

Query: 233 -----------IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
                      +P ++ +L  L+ L L++N   TLP+++S + NL E+ L   K   + P
Sbjct: 269 VLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNK-FNTFP 327

Query: 282 QI 283
           ++
Sbjct: 328 EV 329



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 135/353 (38%), Gaps = 92/353 (26%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           S+ +L+ L +    I  +P  +  LT L+ L+++GC+     P  +  LK L  L   GC
Sbjct: 217 SLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSVRGCQ-FDEFPRQVLQLKTLVVLYAGGC 275

Query: 63  ----------------------SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
                                 + L+  P  ++ M +L ++YL G      P  +  LP 
Sbjct: 276 KFDIVPDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPA 335

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSG---------CC-------------KLEN 138
           +E L ++   N+ RLP++++    L+ L++SG          C             K EN
Sbjct: 336 MEKLDISN-NNITRLPTALHRADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAEN 394

Query: 139 ---------------------VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
                                +P+ +  +  LE LDVS   +     +I  +  L  L+ 
Sbjct: 395 LQLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHA 454

Query: 178 SG---CNEPPASASW----HLHLPFNLLGKSSCPVALMLPSLT--------------GVC 216
            G    + P A AS     HL +  N L  +  P    L  L               GVC
Sbjct: 455 DGNMLTSLPQAIASMLELTHLFINDNKLS-TFPPGVEKLQKLAHLFMNDNQLREVPPGVC 513

Query: 217 SLTKLDLSDCGLGE--AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
           SL  L++  C      +  P  ++ L  L+ELY++ N    +P  +  L NLE
Sbjct: 514 SLPNLEVL-CVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLE 565



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 8/181 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +ASM +L+ L+++   ++  P  +E L  L  L +     L  +P  + SL  L  L + 
Sbjct: 466 IASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMND-NQLREVPPGVCSLPNLEVLCVR 524

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--NECKNLVRLPSS 118
             + L  FP  V  ++ L +LY+    + EVP  +  L  LE+  +  NE   L  LP  
Sbjct: 525 -SNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNE---LSTLPPG 580

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           ++ L  L+ + L G  K +  P+ L ++ ++EELD+    I R  +++     L+ L  S
Sbjct: 581 MSQLLKLREI-LLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRADKLKDLDVS 639

Query: 179 G 179
           G
Sbjct: 640 G 640



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 30  LELLTLKGC-------KNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLY 82
           L+L T++GC       + L+S+P  +  +  L  L++S  ++L   P+ +  +  LS+L+
Sbjct: 395 LQLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSN-NELTSIPEAIGRLHKLSRLH 453

Query: 83  LDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDT 142
            DG  +  +P +I  +  L  L++N+ K L   P  +  L+ L  L ++   +L  VP  
Sbjct: 454 ADGNMLTSLPQAIASMLELTHLFINDNK-LSTFPPGVEKLQKLAHLFMNDN-QLREVPPG 511

Query: 143 LGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPASASWHLHLPFNLLG 199
           +  + +LE L V    +      +  ++ LR LY         PP   S      F ++ 
Sbjct: 512 VCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVIN 571

Query: 200 KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                ++ + P ++ +  L ++ L +        P  +  L +++EL +  NN   LP +
Sbjct: 572 NE---LSTLPPGMSQLLKLREILLGNNKFD--TFPEVLCELPAMEELDIRNNNITRLPTA 626

Query: 260 ISGLLNLEELEL 271
           +     L++L++
Sbjct: 627 LHRADKLKDLDV 638


>gi|242033769|ref|XP_002464279.1| hypothetical protein SORBIDRAFT_01g015550 [Sorghum bicolor]
 gi|241918133|gb|EER91277.1| hypothetical protein SORBIDRAFT_01g015550 [Sorghum bicolor]
          Length = 1314

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 21/306 (6%)

Query: 1   MASMKDLSDLYLDGTS-ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + S+  +  L + G+S I+++P SI  L  L  L L  C NL+ LP + S+L  L  L L
Sbjct: 618 ITSLLKVHYLSIHGSSKISKLPESISKLKELTHLDLSCCGNLAYLPDSFSNLTNLSLLNL 677

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C+ L   P  +  + +L  L L G  + E+P  +  L  L LL+L+ C  L  LP SI
Sbjct: 678 ADCTSLSALPNSICDLVNLEILNLSGCVLEELPQIMGNLHKLRLLHLSRCSKLRLLPDSI 737

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFS 178
           + L SL  L+LS C  L+ +P + G +E L  L++S  +++ R  +S+  +K L+ L   
Sbjct: 738 SNLVSLDKLDLSYCSVLQELPKSFGDLEELRFLELSHCSSLVRLPNSVGNLKKLQHLNLE 797

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           G     +     L   FN+L +  C ++          +L  L+LS C +  + +   + 
Sbjct: 798 GFMCSTSLHPSDLISYFNMLFRVVCKLS----------NLEYLNLSACPV--STLAESLG 845

Query: 239 NLHSLKELYLNRN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR-ANGCS 296
           NL  L+ L ++R  +   LP +I  L NLE L +  C      P+I   ++    ANG  
Sbjct: 846 NLKMLRTLDISRCISLRKLPQTILKLPNLESLVVRGC-----FPRIEEQIKESSLANGLL 900

Query: 297 SLVTLF 302
           SL   F
Sbjct: 901 SLPKFF 906



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 157/364 (43%), Gaps = 95/364 (26%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D TS++ +P+SI  L  LE+L L GC  L  LP  + +L  LR L LS CSKL+  P  +
Sbjct: 679  DCTSLSALPNSICDLVNLEILNLSGCV-LEELPQIMGNLHKLRLLHLSRCSKLRLLPDSI 737

Query: 73   ASMEDLSKLYLDGTSI-AEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
            +++  L KL L   S+  E+P S   L  L  L L+ C +LVRLP+S+  LK L+ LNL 
Sbjct: 738  SNLVSLDKLDLSYCSVLQELPKSFGDLEELRFLELSHCSSLVRLPNSVGNLKKLQHLNLE 797

Query: 132  G----------------------CCKLENV-------------PDTLGKVESLEELDVSG 156
            G                       CKL N+              ++LG ++ L  LD+S 
Sbjct: 798  GFMCSTSLHPSDLISYFNMLFRVVCKLSNLEYLNLSACPVSTLAESLGNLKMLRTLDISR 857

Query: 157  -TAIRRPTSSIFLMKNLRSLYFSGCN-------EPPASASWHLHLPFNLL-----GKSSC 203
              ++R+   +I  + NL SL   GC        +  + A+  L LP   +     G SS 
Sbjct: 858  CISLRKLPQTILKLPNLESLVVRGCFPRIEEQIKESSLANGLLSLPKFFVCTMPGGLSSN 917

Query: 204  --------PVALMLPSLTGVCSL--------------TKLDLSDCG------------LG 229
                    P  L +  L  V SL              +KL LS  G            LG
Sbjct: 918  IVQLEGVNPGELEIKFLENVASLEEVKKVNLAFKSRLSKLFLSWTGSVNDHLLDDESLLG 977

Query: 230  EAAIPSDIDNLHSLKELYLNRNNFVTLPA---SISGLLNLEELELEDCKRLQSLPQIP-- 284
            E   P+      +L++  L     + LP+   S + LLNL  +EL +  R   LP +   
Sbjct: 978  ELVPPT------TLEQFILQGYMGIRLPSWTGSATYLLNLSRIELLNLPRCTQLPSLGQL 1031

Query: 285  PNLQ 288
            PNLQ
Sbjct: 1032 PNLQ 1035



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 122/244 (50%), Gaps = 16/244 (6%)

Query: 39  KNLSSLPV---TISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT--SIAEVPS 93
           K    LPV     SS K L  L+++GC  L+K    +  +  L   YLD +  S  ++P 
Sbjct: 560 KKTPCLPVPGDAFSSTKNLNVLDITGCD-LRKLSDPIRQLAHLR--YLDASLLSDKDLPM 616

Query: 94  SIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELD 153
            I  L  +  L ++    + +LP SI+ LK L  L+LS C  L  +PD+   + +L  L+
Sbjct: 617 WITSLLKVHYLSIHGSSKISKLPESISKLKELTHLDLSCCGNLAYLPDSFSNLTNLSLLN 676

Query: 154 VSG-TAIRRPTSSIFLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLGKSSCPVALMLP 210
           ++  T++    +SI  + NL  L  SGC   E P     +LH    LL  S C    +LP
Sbjct: 677 LADCTSLSALPNSICDLVNLEILNLSGCVLEELPQIMG-NLH-KLRLLHLSRCSKLRLLP 734

Query: 211 -SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NNFVTLPASISGLLNLEE 268
            S++ + SL KLDLS C + +  +P    +L  L+ L L+  ++ V LP S+  L  L+ 
Sbjct: 735 DSISNLVSLDKLDLSYCSVLQ-ELPKSFGDLEELRFLELSHCSSLVRLPNSVGNLKKLQH 793

Query: 269 LELE 272
           L LE
Sbjct: 794 LNLE 797



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 23/138 (16%)

Query: 17   ITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASME 76
            +T +P+S E LT L  L +  C  L+ LP  + SL  L+ L ++ C KLK F Q      
Sbjct: 1180 LTSLPASAEGLTSLHSLLVFACHGLTELPEWLGSLTSLQELVINYCPKLKSFQQ------ 1233

Query: 77   DLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKL 136
                             S+  L  L LL+L  C  +  LP  +  L SL+ L++ GC K+
Sbjct: 1234 -----------------SMRHLASLRLLHLGHCDGMSELPEWLGDLISLQRLDIWGCQKI 1276

Query: 137  ENVPDTLGKVESLEELDV 154
            +++P  +  +  L+E+ +
Sbjct: 1277 KSLPQCVKHLAMLKEVQI 1294



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 2/114 (1%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIE 749
           C +L  LP +I  L  L  LNLSG     E P+I  +  +L  +HL   + +R LP SI 
Sbjct: 680 CTSLSALPNSICDLVNLEILNLSG-CVLEELPQIMGNLHKLRLLHLSRCSKLRLLPDSIS 738

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
            L      +L  C  L+ LP +   L  LR +  S CS L  +  ++G ++ L+
Sbjct: 739 NLVSLDKLDLSYCSVLQELPKSFGDLEELRFLELSHCSSLVRLPNSVGNLKKLQ 792



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 54   LRTLELSGCSKLKKFPQIVASMEDLSKLY----LDGTSIAEVPSSIELLPGLELLYLNEC 109
            LR L +  C+KL   P   AS E L+ L+         + E+P  +  L  L+ L +N C
Sbjct: 1169 LRKLRIRMCNKLTSLP---ASAEGLTSLHSLLVFACHGLTELPEWLGSLTSLQELVINYC 1225

Query: 110  KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
              L     S+  L SL+ L+L  C  +  +P+ LG + SL+ LD+ G
Sbjct: 1226 PKLKSFQQSMRHLASLRLLHLGHCDGMSELPEWLGDLISLQRLDIWG 1272



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 24/155 (15%)

Query: 98   LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
            LP L  L +  C  L  LP+S  GL SL +L +  C  L  +P+ LG + SL+EL ++  
Sbjct: 1166 LPDLRKLRIRMCNKLTSLPASAEGLTSLHSLLVFACHGLTELPEWLGSLTSLQELVINYC 1225

Query: 158  -AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
              ++    S+  + +LR L+   C+       W                      L  + 
Sbjct: 1226 PKLKSFQQSMRHLASLRLLHLGHCDGMSELPEW----------------------LGDLI 1263

Query: 217  SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
            SL +LD+  C     ++P  + +L  LKE+ +  N
Sbjct: 1264 SLQRLDIWGCQ-KIKSLPQCVKHLAMLKEVQIKHN 1297



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 24/156 (15%)

Query: 671 RELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRD 729
           ++L + I  L  +  L+++G   + +LP +IS LK L+ L+LS        P+  ++  +
Sbjct: 612 KDLPMWITSLLKVHYLSIHGSSKISKLPESISKLKELTHLDLSCCGNLAYLPDSFSNLTN 671

Query: 730 QLLEIHLEGTAIRGLPASI------ELLS-------------GNI----LSNLKDCKNLK 766
             L    + T++  LP SI      E+L+             GN+    L +L  C  L+
Sbjct: 672 LSLLNLADCTSLSALPNSICDLVNLEILNLSGCVLEELPQIMGNLHKLRLLHLSRCSKLR 731

Query: 767 SLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            LP +I+ L SL  +  S CS L+ + ++ G +E L
Sbjct: 732 LLPDSISNLVSLDKLDLSYCSVLQELPKSFGDLEEL 767


>gi|242047708|ref|XP_002461600.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
 gi|241924977|gb|EER98121.1| hypothetical protein SORBIDRAFT_02g005220 [Sorghum bicolor]
          Length = 1100

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 139/291 (47%), Gaps = 19/291 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  L +  T I E+P  I  L  LE L + G   +S LP  I +L+ L TL++ 
Sbjct: 681 IGKLQHLKTLDMSCTGIRELPKEIGKLQHLETLDISGTW-ISELPKEIGNLQHLVTLDVK 739

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G + +K+ P  +++++ L+ L L  T I ++P  I  L  LE L L    NL  LP  I+
Sbjct: 740 GTTGIKELPPEISNLQRLAYLDLSYTQITKMPRDIGKLQHLETLNLTST-NLTELPREIS 798

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK L  LNL G   +  VP  +GK++ LE LD+  T +R+    I  ++NL+ L     
Sbjct: 799 NLKWLVYLNLYGTA-ITKVPRDIGKLQHLEYLDLGNTKVRKIPREIGGLQNLKYLKDDVG 857

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
            +P  +A     LP  L G   C V     +   V SL    LS     +  + +   ++
Sbjct: 858 MQPIEAA----QLP-KLEGLPKC-VRQACKNSNLVSSLAGEILSFMAGVDGGLINHTKHM 911

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           H  + +  + NN   L   I       +LE +D K L+ +    PNLQ+++
Sbjct: 912 HIPQWIKEHFNNIGFLDIRIC------KLEEQDLKILREM----PNLQWLK 952



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 37/262 (14%)

Query: 14  GTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVA 73
           G  I E+P+ I  L  L+ L +   K ++ LP  I  LK L+TL++S   ++ + P+ + 
Sbjct: 624 GDGIIEIPADIGRLKYLDTLEVTATK-ITRLPAEIGDLKQLKTLDVSENREITELPKEIG 682

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            ++ L  L +  T I E+P  I  L  LE L ++    +  LP  I  L+ L TL++ G 
Sbjct: 683 KLQHLKTLDMSCTGIRELPKEIGKLQHLETLDISGTW-ISELPKEIGNLQHLVTLDVKGT 741

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASAS--- 188
             ++ +P  +  ++ L  LD+S T I +    I  +++L +L  +  N  E P   S   
Sbjct: 742 TGIKELPPEISNLQRLAYLDLSYTQITKMPRDIGKLQHLETLNLTSTNLTELPREISNLK 801

Query: 189 WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
           W ++L  NL G                 ++TK            +P DI  L  L+ L L
Sbjct: 802 WLVYL--NLYG----------------TAITK------------VPRDIGKLQHLEYLDL 831

Query: 249 NRNNFVTLPASISGLLNLEELE 270
                  +P  I GL NL+ L+
Sbjct: 832 GNTKVRKIPREIGGLQNLKYLK 853



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T IREL   I  L  L  L ++G   +  LP+ I  L++L TL++ G +  +E P   S+
Sbjct: 695 TGIRELPKEIGKLQHLETLDISGTW-ISELPKEIGNLQHLVTLDVKGTTGIKELPPEISN 753

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
             +L  + L  T I  +P  I  L      NL    NL  LP  I+ L+ L  +   G +
Sbjct: 754 LQRLAYLDLSYTQITKMPRDIGKLQHLETLNLTST-NLTELPREISNLKWLVYLNLYGTA 812

Query: 788 KLKNVTETLGKVESLE 803
            +  V   +GK++ LE
Sbjct: 813 -ITKVPRDIGKLQHLE 827


>gi|108740354|gb|ABG01533.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740356|gb|ABG01534.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740378|gb|ABG01545.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740380|gb|ABG01546.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 142/294 (48%), Gaps = 38/294 (12%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           DLY   +S+  +PSSI     L +L L GC NL  LP +I +   L+ L+L  C+KL + 
Sbjct: 110 DLYY-CSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLEL 168

Query: 69  PQIVASMEDLSKLYLDGTSIA-EVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           P  + +  +L  L LD  S   ++PSSI     L  + L+ C NLV LP SI  L+ L+ 
Sbjct: 169 PSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQE 228

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEPPA 185
           L L GC KLE++P  +  +ESL+ L ++  ++ +    I    N+R+LY  G    E P 
Sbjct: 229 LILKGCSKLEDLPININ-LESLDRLVLNDCSMLKRFPEI--STNVRALYLCGTAIEEVPL 285

Query: 186 SA-SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           S  SW      + L  S     +  P +  +  +T LDLSD  L E              
Sbjct: 286 SIRSWP---RLDELLMSYFDNLIEFPHVLDI--ITNLDLSDKDLQEV------------- 327

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
                       P  I  +  L+ L L+  +++ SLPQIP +L+++ A  C SL
Sbjct: 328 ------------PPLIKRISRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESL 369



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 126/243 (51%), Gaps = 13/243 (5%)

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELL 104
           +++  L+ LR ++LS    LK+ P +  ++ +L KL+L G +S+ ++PS I     LE L
Sbjct: 5   LSVQPLQNLRQMDLSYSVNLKELPDLSTAI-NLRKLFLSGCSSLIKLPSCIGNATNLEDL 63

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV--SGTAIRRP 162
            LN C +LV LPS  + + +L+ L L  C  L  +P ++G   +L ELD+    + IR P
Sbjct: 64  DLNGCSSLVELPSFGDAI-NLQKLLLRHCSNLVELP-SIGNAINLRELDLYYCSSLIRLP 121

Query: 163 TSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT 219
            SSI    NL  L  +GC+   E P+S    ++L    L    C   L LPS  G     
Sbjct: 122 -SSIGNAINLLILDLNGCSNLLELPSSIGNAINL--QKLDLRRCAKLLELPSSIGNAINL 178

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQ 278
           +  L D       +PS I N  +L  + L N +N V LP SI  L  L+EL L+ C +L+
Sbjct: 179 QNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLE 238

Query: 279 SLP 281
            LP
Sbjct: 239 DLP 241



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 34/280 (12%)

Query: 14  GTSITEVPSSIELLTGLEL--LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
             ++ E+P   +L T + L  L L GC +L  LP  I +   L  L+L+GCS L + P  
Sbjct: 21  SVNLKELP---DLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSF 77

Query: 72  VASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
             ++ +L KL L   S + E+PS I     L  L L  C +L+RLPSSI    +L  L+L
Sbjct: 78  GDAI-NLQKLLLRHCSNLVELPS-IGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDL 135

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           +GC  L  +P ++G   +L++LD+   A +    SSI    NL+       N      S 
Sbjct: 136 NGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQ-------NLLLDDCSS 188

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            L LP                S+    +L  ++LS+C      +P  I NL  L+EL L 
Sbjct: 189 LLKLP---------------SSIGNATNLVYMNLSNCS-NLVELPLSIGNLQKLQELILK 232

Query: 250 R-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
             +    LP +I+ L +L+ L L DC  L+  P+I  N++
Sbjct: 233 GCSKLEDLPININ-LESLDRLVLNDCSMLKRFPEISTNVR 271



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEIHLEGT 739
             L+ L LNGC NL  LP +I     L  L+L   +K  E P  I ++ +    +  + +
Sbjct: 128 INLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCS 187

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           ++  LP+SI   +  +  NL +C NL  LP +I  L+ L+ +   GCSKL+++   +  +
Sbjct: 188 SLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-L 246

Query: 800 ESLE 803
           ESL+
Sbjct: 247 ESLD 250



 Score = 40.4 bits (93), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 3/123 (2%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD-QLLEIHLEGTA 740
            L  L LNGC +L  LP    A+  L  L L   S   E P I ++ + + L+++   + 
Sbjct: 59  NLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNLVELPSIGNAINLRELDLYYCSSL 117

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           IR LP+SI      ++ +L  C NL  LPS+I    +L+ +    C+KL  +  ++G   
Sbjct: 118 IR-LPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAI 176

Query: 801 SLE 803
           +L+
Sbjct: 177 NLQ 179


>gi|359727310|ref|ZP_09266006.1| hypothetical protein Lwei2_10290 [Leptospira weilii str.
           2006001855]
          Length = 307

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 39/287 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + + KD+  L L G  +T +P  I  L  L++L L G +   +LP  I  L+ L+ L+LS
Sbjct: 44  LKNPKDVRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQ-FKALPKEIGQLQNLQKLDLS 102

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ +  ++ L +L+LDG  +  +P  IE +  L+ L L+    L  LP  I 
Sbjct: 103 G-NELAILPEEIGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLS-GNQLTNLPKEIG 160

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L  L+ L L+   +L+ +P  +G+++ L +LD+SG  +      I  ++ L+       
Sbjct: 161 KLHKLQVLELN-SNQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQLQKLQK------ 213

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                     L L  N L         +LP   G+  L +LDLS   L    +  +I  L
Sbjct: 214 ----------LDLAENQLA--------VLPK--GIEKLKELDLSSNQL--TNLSQEIGKL 251

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELEL-------EDCKRLQSL 280
            +L+ L L+ N   TLP  I  L NL EL L       E+ +R++ L
Sbjct: 252 KNLRILNLDYNRLTTLPKEIGKLQNLRELYLHKNPIAREEIERIRKL 298



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 27/171 (15%)

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
           L  LP  I  L++L+ L LSG  + + +P  +G++++L++LD+SG  +      I  +K 
Sbjct: 60  LTTLPKEIGKLRNLQILYLSGN-QFKALPKEIGQLQNLQKLDLSGNELAILPEEIGQLKK 118

Query: 172 LRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEA 231
           L+ L+  G                         +  +   +  + +L KLDLS   L   
Sbjct: 119 LQELFLDGNQ-----------------------LETLPKEIEKIQNLQKLDLSGNQL--T 153

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +P +I  LH L+ L LN N   TLP  I  L  L +L+L    +L++LP+
Sbjct: 154 NLPKEIGKLHKLQVLELNSNQLKTLPKEIGQLQKLPDLDL-SGNQLETLPK 203


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 125/295 (42%), Gaps = 64/295 (21%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSG-- 61
           ++ L +LY++G  +TEVPS +  L  LE+L +    NLS+ P  +  L+ LR L + G  
Sbjct: 127 LQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSN-NNLSTFPPGVEKLQKLRELYIYGNQ 185

Query: 62  --------CS------------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL 101
                   CS             L  FP  V  ++ L +LY+ G  + EVPS +  LP L
Sbjct: 186 LTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNL 245

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           E+L ++  K L   P  +  L+ L+ L +    +L  VP  +  +  LE L V    IRR
Sbjct: 246 EVLSVSNNK-LSTFPPGVEKLQKLRELYIYDN-QLTEVPTGVCSLPDLEWLSVGNNPIRR 303

Query: 162 PTSSIFLMKNLRSLYFSGC--NEPPASAS-----WHLHLPFNLLGKSSCPVALMLPSLTG 214
               +  +K L  LY   C  +  P         W L L +NLL                
Sbjct: 304 LPRQVLQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLL---------------- 347

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
                             +PS + +LH+L+E+ L  N F T P  +  L  +E+L
Sbjct: 348 ----------------KTLPSTMRHLHNLREVRLWSNKFDTFPEVLCELPAMEKL 386



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 31/276 (11%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S++ L+ LY+    +TE+PS +  L  LE+L++                         
Sbjct: 78  IGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSV------------------------- 112

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +KL  FP  V  ++ L +LY++G  + EVPS +  LP LE+L ++   NL   P  + 
Sbjct: 113 GNNKLSTFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSN-NNLSTFPPGVE 171

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L + G  +L  VP  +  + +LE L VS   +      +  ++ LR LY  G 
Sbjct: 172 KLQKLRELYIYG-NQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYG- 229

Query: 181 NEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           N+     S    LP   +L  S+  ++   P +  +  L +L + D  L E  +P+ + +
Sbjct: 230 NQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYDNQLTE--VPTGVCS 287

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           L  L+ L +  N    LP  +  L  LE+L   DCK
Sbjct: 288 LPDLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGDCK 323



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 46/207 (22%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           ++ L +LY+ G  +TEVPS +  L  LE+L++   K LS+ P  +  L+ LR L +   +
Sbjct: 219 LQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVSNNK-LSTFPPGVEKLQKLRELYIYD-N 276

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK------------- 110
           +L + P  V S+ DL  L +    I  +P  +  L  LE LY  +CK             
Sbjct: 277 QLTEVPTGVCSLPDLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGDCKFDMVPDEVGNLQH 336

Query: 111 --------NLVR-LPSSINGLKSLKTLNL---------SGCCKLE-------------NV 139
                   NL++ LPS++  L +L+ + L            C+L               +
Sbjct: 337 LWFLALEYNLLKTLPSTMRHLHNLREVRLWSNKFDTFPEVLCELPAMEKLVIRNNNITRL 396

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSI 166
           P  L + + L++LDVSG  +  P   +
Sbjct: 397 PTALHRADKLKDLDVSGNPLTYPPQDV 423



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 32/180 (17%)

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           + L  +P  +  +  L+ L++S    L ++P+ +G+++ L  LD     + R   +I  +
Sbjct: 23  QGLTSIPEEVFDITDLEDLDVSDN-NLTSIPEAIGRLQKLYRLDAYSNMLTRLPQAIGSL 81

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
           + L                 HL++  N L +        +PS  GVCSL  L++   G  
Sbjct: 82  QKLT----------------HLYIYDNQLTE--------MPS--GVCSLPNLEVLSVGNN 115

Query: 230 E-AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           + +  P  ++ L  L+ELY+N N    +P+ +  L NLE L + +     +L   PP ++
Sbjct: 116 KLSTFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSN----NNLSTFPPGVE 171


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 141/302 (46%), Gaps = 7/302 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+L    +T +P  IE L  L+ L L   + L++LP  I  L+ L  L L 
Sbjct: 211 IGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQ-LTTLPKEIGKLQKLEALHLE 269

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P  I  L  L+ L+L E   L  LP  I 
Sbjct: 270 N-NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHL-ENNQLTTLPKEIG 327

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P+ + K++ L++L  SG         I+ ++NL++L     
Sbjct: 328 KLQNLQELRLD-YNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSN 386

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           LL  S   +A +   +  + +L  L LSD  L    +P +I  L
Sbjct: 387 QLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQL--TTLPKEIGKL 444

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            +L+ELYL  N   TLP  I  L +LE L L D   L S P+    LQ ++     ++ T
Sbjct: 445 QNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNP-LTSFPEEIGKLQHLKWFRLENIPT 503

Query: 301 LF 302
           L 
Sbjct: 504 LL 505



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 29/201 (14%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP  I  L++L+ L+LS   +L  +P  +GK+++L++L+++   +      I  ++NL+ 
Sbjct: 161 LPKEIGKLQNLRDLDLS-SNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQE 219

Query: 175 LYFSGCN--------EPPASASWHLHLPFNLL-------GKSSCPVAL--------MLPS 211
           L+ +           E   +  W L L  N L       GK     AL         LP 
Sbjct: 220 LHLTDNQLTTLPKEIEKLQNLQW-LGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPK 278

Query: 212 LTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELE 270
             G + +L  L LS+  L    +P +I  L  L+EL+L  N   TLP  I  L NL+EL 
Sbjct: 279 EIGKLQNLQWLGLSNNQL--TTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELR 336

Query: 271 LEDCKRLQSLPQIPPNLQFVR 291
           L D  RL +LP+    LQ ++
Sbjct: 337 L-DYNRLTTLPEEIEKLQKLK 356



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 28/160 (17%)

Query: 139 VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLL 198
           +P  +GK+++L +LD+S   +      I  ++NL+                 L+L  N L
Sbjct: 161 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQK----------------LNLTRNRL 204

Query: 199 GKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
                     LP   G + +L +L L+D  L    +P +I+ L +L+ L LN N   TLP
Sbjct: 205 AN--------LPEEIGKLQNLQELHLTDNQL--TTLPKEIEKLQNLQWLGLNNNQLTTLP 254

Query: 258 ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             I  L  LE L LE+  +L +LP+    LQ ++  G S+
Sbjct: 255 KEIGKLQKLEALHLEN-NQLTTLPKEIGKLQNLQWLGLSN 293


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 140/309 (45%), Gaps = 51/309 (16%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + ++ DL+ LYL+   +  +P  I  L  L +L+L+  + L+ LP  I +L  LR L LS
Sbjct: 763  IGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNR-LTKLPKEIGNLSHLRGLYLS 821

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--NECK-------- 110
            G  +LK  P+ ++++ +L++L L    +  +P  I  L  L  L L  N+ K        
Sbjct: 822  GNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGN 881

Query: 111  ------------NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
                         L  LP  I  L +L+ L LS   +L  +P  +G + +L ELD+S   
Sbjct: 882  LTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLS-RNQLTALPKEIGNLTNLTELDLSENE 940

Query: 159  IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
               P + I  + NLR LY                        +   + +++P +  + +L
Sbjct: 941  NVLP-AEIGNLTNLRRLYL-----------------------NRKQLTVLVPEIGNLTNL 976

Query: 219  TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
              L L D  L   A+P +I  L  LK L +N+N    LP  I  L NL EL L D  +L 
Sbjct: 977  KTLSLKDNQL--IALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYD-NQLT 1033

Query: 279  SLPQIPPNL 287
            +LP+   NL
Sbjct: 1034 ALPKEIGNL 1042



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 132/278 (47%), Gaps = 33/278 (11%)

Query: 8   SDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKK 67
           + L L G  +TE+P  I  LT L  L L   + L++LP  I +L  LR L L   ++L K
Sbjct: 747 TSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQ-LATLPPEIGNLINLRVLSLEN-NRLTK 804

Query: 68  FPQIVASMEDLSKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
            P+ + ++  L  LYL G    +V P  I  L  L  L L+    L  LP  I  L +L 
Sbjct: 805 LPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLS-SNQLKVLPKEIGNLTNLT 863

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
            LNLS   +L+ +P  +G + +L  LD++G  +      I  + NL  LY S  N+  A 
Sbjct: 864 QLNLS-SNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLS-RNQLTA- 920

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
                                 LP   G + +LT+LDLS+    E  +P++I NL +L+ 
Sbjct: 921 ----------------------LPKEIGNLTNLTELDLSE---NENVLPAEIGNLTNLRR 955

Query: 246 LYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
           LYLNR     L   I  L NL+ L L+D + +   P+I
Sbjct: 956 LYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEI 993



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 132/284 (46%), Gaps = 32/284 (11%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + ++ +L+ L L    +  +P  I  LT L LL L G + L+ LP  I +L  L  L LS
Sbjct: 856  IGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQ-LTELPPEIGNLTNLEVLYLS 914

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
              ++L   P+ + ++ +L++L L       +P+ I  L  L  LYLN  K L  L   I 
Sbjct: 915  -RNQLTALPKEIGNLTNLTELDLSENENV-LPAEIGNLTNLRRLYLNR-KQLTVLVPEIG 971

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
             L +LKTL+L    +L  +P  +GK+  L+ LD++   +R+    I  + NL  LY    
Sbjct: 972  NLTNLKTLSLKDN-QLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYD- 1029

Query: 181  NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDN 239
            N+  A                       LP   G + +LTKL L    L   A+P ++  
Sbjct: 1030 NQLTA-----------------------LPKEIGNLTNLTKLHLYKNKL--MALPPEMGR 1064

Query: 240  LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI 283
            L +L ELYL+ N    LP  I  L NL +L   + + +   P+I
Sbjct: 1065 LTNLIELYLDYNQLTALPPEIGNLTNLTQLSFYNNQLISPSPEI 1108


>gi|357449963|ref|XP_003595258.1| Heat shock protein [Medicago truncatula]
 gi|355484306|gb|AES65509.1| Heat shock protein [Medicago truncatula]
          Length = 1558

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D T++  + +S+  L  L LL+ + C  L  L  TI+ L  L TL++ GCS+LK FP+++
Sbjct: 656 DCTNLITIHNSVGFLNKLVLLSTQRCTQLELLVPTIN-LPSLETLDMRGCSRLKSFPEVL 714

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             M+++  +YLD TSI ++P SI+ L GL  L+L EC +L +LP SI  L  L+     G
Sbjct: 715 GVMKNIRDVYLDQTSIDKLPFSIQKLVGLRRLFLRECLSLTQLPDSIRTLPKLEITMAYG 774

Query: 133 C 133
           C
Sbjct: 775 C 775



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T++  +  ++  L  LV L+   C  LE L  TI+ L  L TL++ G S+ + FPE
Sbjct: 654 LDDCTNLITIHNSVGFLNKLVLLSTQRCTQLELLVPTIN-LPSLETLDMRGCSRLKSFPE 712

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +      + +++L+ T+I  LP SI+ L G     L++C +L  LP +I  L  L +   
Sbjct: 713 VLGVMKNIRDVYLDQTSIDKLPFSIQKLVGLRRLFLRECLSLTQLPDSIRTLPKLEITMA 772

Query: 784 SGC 786
            GC
Sbjct: 773 YGC 775



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 40/68 (58%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  MK++ D+YLD TSI ++P SI+ L GL  L L+ C +L+ LP +I +L  L      
Sbjct: 714 LGVMKNIRDVYLDQTSIDKLPFSIQKLVGLRRLFLRECLSLTQLPDSIRTLPKLEITMAY 773

Query: 61  GCSKLKKF 68
           GC   + F
Sbjct: 774 GCRGFQLF 781



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 10/189 (5%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LPS  N  K+L  L+L   C +   P  +   ESL  LD  G  +     S+  + NL +
Sbjct: 595 LPSDFNP-KNLMILSLHESCLISFKP--IKAFESLSFLDFDGCKLLTELPSLSGLVNLWA 651

Query: 175 LYFSGC-NEPPASASWHLHLPFNLLGKSSCP-VALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           L    C N      S        LL    C  + L++P++  + SL  LD+  C   ++ 
Sbjct: 652 LCLDDCTNLITIHNSVGFLNKLVLLSTQRCTQLELLVPTIN-LPSLETLDMRGCSRLKS- 709

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQF 289
            P  +  + +++++YL++ +   LP SI  L+ L  L L +C  L  LP   +  P L+ 
Sbjct: 710 FPEVLGVMKNIRDVYLDQTSIDKLPFSIQKLVGLRRLFLRECLSLTQLPDSIRTLPKLEI 769

Query: 290 VRANGCSSL 298
             A GC   
Sbjct: 770 TMAYGCRGF 778



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 23/132 (17%)

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN----------- 120
           + + E LS L  DG  +     S+  L  L  L L++C NL+ + +S+            
Sbjct: 620 IKAFESLSFLDFDGCKLLTELPSLSGLVNLWALCLDDCTNLITIHNSVGFLNKLVLLSTQ 679

Query: 121 ------------GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
                        L SL+TL++ GC +L++ P+ LG ++++ ++ +  T+I +   SI  
Sbjct: 680 RCTQLELLVPTINLPSLETLDMRGCSRLKSFPEVLGVMKNIRDVYLDQTSIDKLPFSIQK 739

Query: 169 MKNLRSLYFSGC 180
           +  LR L+   C
Sbjct: 740 LVGLRRLFLREC 751



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 65/242 (26%)

Query: 621 DSGCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSD--GTDIRELSL 675
           D GC+  +   +  GR+ VR++S  EPG  SRLW       DI+ VL +  GTD  E+ +
Sbjct: 484 DGGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWFH----DDIIHVLEENTGTDTIEVII 539

Query: 676 --------------AIELLFGLVQLTLNGC---KNLERLPRTISALKY------------ 706
                         A + +  L  L +      K+ ++LP ++  L +            
Sbjct: 540 INLCNDKEVRWSGKAFKKMKNLKILIIRSARFSKDPQKLPNSLRVLDWSGYPSQSLPSDF 599

Query: 707 --------------------------LSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                                     LS L+  G     E P ++   +       + T 
Sbjct: 600 NPKNLMILSLHESCLISFKPIKAFESLSFLDFDGCKLLTELPSLSGLVNLWALCLDDCTN 659

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  +  S+  L+  +L + + C  L+ L  TIN L SL  +   GCS+LK+  E LG ++
Sbjct: 660 LITIHNSVGFLNKLVLLSTQRCTQLELLVPTIN-LPSLETLDMRGCSRLKSFPEVLGVMK 718

Query: 801 SL 802
           ++
Sbjct: 719 NI 720


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 11/293 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  LYL+   +T +P+ I  L  L++L L   + L+ LP  I  L+ L+ L L 
Sbjct: 67  IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNE-LTILPKEIGKLQNLQVLNL- 124

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P  V  +++L  L LD   +  +P  I  L  L++L L+  K L  LP  I 
Sbjct: 125 GFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNK-LTILPEKIG 183

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L++L+ LNL    KL  +P+ +G++++L+ L+  G  +      I  +  L+ LY  G 
Sbjct: 184 QLQNLQVLNLD-LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGN 242

Query: 180 -CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
                P        L    LG +  P+  +   +  +  L  L L    +     P +I 
Sbjct: 243 QLTTLPEEIGQLKKLQELYLGNN--PLRTLPKEIEQLQKLQTLYLEGNQI--TTFPKEIG 298

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
            L +L+EL L  N   TLP  I  L NL+EL LE   +L +LP+    LQ +R
Sbjct: 299 QLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLE-FNQLATLPKEVGQLQKLR 350



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 37/248 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL--LYLNECKNL 112
           R L LSG SKL    + +  +++L KLYL+   +  +P+ I  L  L++  LY NE   L
Sbjct: 51  RILNLSG-SKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNE---L 106

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP  I  L++L+ LNL G  +L  +PD +G++++L+ L++    +      I  ++NL
Sbjct: 107 TILPKEIGKLQNLQVLNL-GFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNL 165

Query: 173 RSLYFSGCNE----PPASASWH----LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
           + L     N+    P           L+L  N L         +LP   G     ++ L+
Sbjct: 166 QVLNLD-LNKLTILPEKIGQLQNLQVLNLDLNKLT--------ILPEKIGQLQNLQI-LN 215

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL------------ELE 272
             G      P +I  L  L++LYL  N   TLP  I  L  L+EL            E+E
Sbjct: 216 SQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIE 275

Query: 273 DCKRLQSL 280
             ++LQ+L
Sbjct: 276 QLQKLQTL 283



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  LYL G  +T +P  I  L  L+ L L G   L +LP  I  L+ L+TL L 
Sbjct: 228 IGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYL-GNNPLRTLPKEIEQLQKLQTLYLE 286

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G +++  FP+ +  +++L +L L    +  +P  I  L  L+ L L E   L  LP  + 
Sbjct: 287 G-NQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNL-EFNQLATLPKEVG 344

Query: 121 GLKSLKTLNL 130
            L+ L+ LNL
Sbjct: 345 QLQKLRKLNL 354


>gi|356542397|ref|XP_003539653.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 33/304 (10%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K++ D  L  +S+  +    ++   L  + L  C  ++ +P    + K LR L +  C K
Sbjct: 592 KNIVDFKLSHSSLVSIKPPQKVFQNLTFVNLSQCHFITKIPDMFEA-KNLRVLTIDKCPK 650

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL--LPGLELLYLNECKNLVRLPSSINGL 122
           L+ F      M +L  +YL  +    + S +    LP LE+L  N C  L   P    G 
Sbjct: 651 LEGFHPSAGHMPNL--VYLSASECTMLTSFVPKMNLPYLEMLSFNFCSKLQEFPEV--GG 706

Query: 123 KSLKTLNLSGC-CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           K  K L +      +E  P ++ KV  LE +D++     +  SS   +  L +L  +GC+
Sbjct: 707 KMDKPLKIHMINTAIEKFPKSICKVTGLEYVDMTTCRELKDLSSFVSLPKLVTLKMNGCS 766

Query: 182 EPPASASWHLHLPFNLLGKS-----SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
           +   S        F +  KS     SCP            SL  L LS   L    +   
Sbjct: 767 QLAES--------FKMFRKSHSEANSCP------------SLKALYLSKANLSHEDLSII 806

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCS 296
           ++    L+ L ++ N F +LP  I G L L++L L  C+ L+ +P++P ++Q V A  C 
Sbjct: 807 LEIFPKLEYLNVSHNEFESLPDCIKGSLQLKKLNLSFCRNLKEIPELPSSIQRVDARYCQ 866

Query: 297 SLVT 300
           SL T
Sbjct: 867 SLST 870



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV L+ + C  L      ++ L YL  L+ +  SK +EFPE+    D+ L+IH+  TAI 
Sbjct: 664 LVYLSASECTMLTSFVPKMN-LPYLEMLSFNFCSKLQEFPEVGGKMDKPLKIHMINTAIE 722

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             P SI  ++G    ++  C+ LK L S ++ L  L  +  +GCS+L
Sbjct: 723 KFPKSICKVTGLEYVDMTTCRELKDLSSFVS-LPKLVTLKMNGCSQL 768


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 138/283 (48%), Gaps = 11/283 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  L L+G  +T +P+ I  LT L  L+L G   L S+P  I  L  L  L L 
Sbjct: 24  LGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSL-GENQLRSVPAEIGQLTSLTELNLF 82

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L +L L+   +  VP+ +  L  LE L L+  + L  LP+ I 
Sbjct: 83  D-NQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQ-LTSLPAEIG 140

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SLK L L    +L ++P  +G++ SL E+ + G  +    + I  + +L  LY  G 
Sbjct: 141 QLTSLKELGLH-HIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGN 199

Query: 181 NEPPASAS-WHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDID 238
                 A  W L     L  K +    L  P+  G + SL +L LS   L   ++P++I 
Sbjct: 200 QLTSVPAELWQLTSLEELDLKDNQLTNL--PAEIGQLTSLWQLHLSGNQL--TSVPAEIG 255

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            L SL EL LN N   +LPA I  L +L+ELEL +  +L SLP
Sbjct: 256 QLASLTELELNGNQLTSLPAEIGQLTSLKELEL-NGNQLTSLP 297



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 145/344 (42%), Gaps = 80/344 (23%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +  L  L LD   +T +P+ I  LT L+ L L   + L+SLP  I  L  LR + L G +
Sbjct: 119 LTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQ-LTSLPAEIGQLTSLREVHLYG-N 176

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           +L   P  +  +  L KLYL G  +  VP+ +  L  LE L L + + L  LP+ I  L 
Sbjct: 177 QLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQ-LTNLPAEIGQLT 235

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           SL  L+LSG  +L +VP  +G++ SL EL+++G  +                        
Sbjct: 236 SLWQLHLSGN-QLTSVPAEIGQLASLTELELNGNQLTS---------------------- 272

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDID---- 238
                                    LP+  G + SL +L+L+   L   ++P++I     
Sbjct: 273 -------------------------LPAEIGQLTSLKELELNGNQL--TSLPAEIGQLTS 305

Query: 239 -------------------NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
                               L SL EL L+ N   ++PA I  L +L  L  +D  +L S
Sbjct: 306 LRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKD-NQLTS 364

Query: 280 LPQIPPNLQFVRANG--CSSLVTLFGALKLCRSKYTIINCIDSL 321
           LP     L  +R  G  C+ L ++  A++  R+    +   D +
Sbjct: 365 LPAEIGQLTSLRGLGLECNLLTSVPAAIRELRAAGCTVGMDDGV 408



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 5/225 (2%)

Query: 57  LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
           LEL     +   P  +  +  L KL L+G  +  +P+ I  L  L  L L E + L  +P
Sbjct: 9   LELEWFGLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQ-LRSVP 67

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
           + I  L SL  LNL    +L +VP  +G++ SL +LD+    +    + ++ + +L  L 
Sbjct: 68  AEIGQLTSLTELNLFD-NQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLI 126

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
                     A          LG     +  +   +  + SL ++ L    L   ++P++
Sbjct: 127 LDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQL--TSLPAE 184

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           I  L SL++LYL  N   ++PA +  L +LEEL+L+D  +L +LP
Sbjct: 185 IGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKD-NQLTNLP 228


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LYL    +T +P  I  L  L+ L L   + L++LP  I  LK L++L LS
Sbjct: 114 IEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQ-LTTLPQEIGQLKNLKSLNLS 172

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++K  P+ +  ++ L  L LD   +  +P  IE L  L+ LYL   + L   P  I 
Sbjct: 173 -YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNR-LTTFPKEIE 230

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+ L L    +L  +P  + ++++L+ LD+S   ++     I  +KNL+       
Sbjct: 231 QLKNLQLLYLYDN-QLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQ------- 282

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDN 239
                     L+L +N L         +LP    +  L  L     G  +   +P +I  
Sbjct: 283 ---------ELNLGYNQLT--------VLPK--EIEQLKNLQTLYLGYNQLTVLPKEIGQ 323

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELEL-------EDCKRLQSL 280
           L +LK L+LN N   TLP  I  L NL+EL L       E+ +R+Q L
Sbjct: 324 LQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQKL 371



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 138/306 (45%), Gaps = 12/306 (3%)

Query: 12  LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           L       +P  I  L  L+ L L   + L+ LP  I  LK LR L LS  +++K  P+ 
Sbjct: 56  LSANRFKTLPKEIGKLKNLQELNLNKNQ-LTILPKEIGQLKNLRKLNLSA-NQIKTIPKE 113

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           +  ++ L  LYL    +  +P  I  L  L+ LYL + + L  LP  I  LK+LK+LNLS
Sbjct: 114 IEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQ-LTTLPQEIGQLKNLKSLNLS 172

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
              +++ +P  + K++ L+ L +    +      I  +KNL++LY               
Sbjct: 173 -YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQ 231

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                LL      + ++   +  + +L  LDLS   L    +P +I+ L +L+EL L  N
Sbjct: 232 LKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQL--KTLPKEIEQLKNLQELNLGYN 289

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGCSSLVTLFGALK 306
               LP  I  L NL+ L L    +L  LP+    LQ     F+  N  ++L    G LK
Sbjct: 290 QLTVLPKEIEQLKNLQTLYL-GYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 348

Query: 307 LCRSKY 312
             +  Y
Sbjct: 349 NLQELY 354


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPNEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLKSLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLILSR-QELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP+ I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPNEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           L++S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +LK L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322


>gi|418720656|ref|ZP_13279852.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410742930|gb|EKQ91675.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 251

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 4/188 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L    +  +P+ I  L  L+ L L G + L+ LP  I  LK LR+LEL 
Sbjct: 35  IGQLQNLEELDLGANQLRTIPNEIGQLKDLQELHLDGNQ-LTILPNEIGQLKNLRSLELY 93

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  ++DL  L L    +  +P  I  L  L+ LYLNE + +  LP+ + 
Sbjct: 94  N-NQLTALPNEIGQLKDLRSLELYNNQLTTLPEEIGRLKNLQKLYLNENQ-ITILPNEVG 151

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L  L+ LNLSG  +L N+P  +G+++ L  LD+S   +      I  +KNLR L   G 
Sbjct: 152 NLSELEELNLSGN-RLTNLPKEIGQLQKLRSLDLSNNQLTTLPKEIGHLKNLRRLVLKGN 210

Query: 181 NEPPASAS 188
           N  P    
Sbjct: 211 NFSPQEKE 218



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 35/229 (15%)

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           ++  +P  +E    L+ L L     L  LP+ I  L++L+ L+L G  +L  +P+ +G++
Sbjct: 4   ALTVLPKELERFKNLQKLDL-YSNQLTILPNEIGQLQNLEELDL-GANQLRTIPNEIGQL 61

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
           + L+EL + G  +    + I  +KNLRSL     N+  A                     
Sbjct: 62  KDLQELHLDGNQLTILPNEIGQLKNLRSLELYN-NQLTA--------------------- 99

Query: 207 LMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLN 265
             LP+  G +  L  L+L +  L    +P +I  L +L++LYLN N    LP  +  L  
Sbjct: 100 --LPNEIGQLKDLRSLELYNNQL--TTLPEEIGRLKNLQKLYLNENQITILPNEVGNLSE 155

Query: 266 LEELELEDCKRLQSLPQIPPNLQFVRA-----NGCSSLVTLFGALKLCR 309
           LEEL L    RL +LP+    LQ +R+     N  ++L    G LK  R
Sbjct: 156 LEELNL-SGNRLTNLPKEIGQLQKLRSLDLSNNQLTTLPKEIGHLKNLR 203


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 308 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 353


>gi|108740413|gb|ABG01562.1| disease resistance protein [Arabidopsis thaliana]
 gi|108740415|gb|ABG01563.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 38/294 (12%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           DLY   +S+  +PSSI     L +L L GC NL  LP +I +   L+ L+L  C+KL + 
Sbjct: 110 DLYY-CSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLEL 168

Query: 69  PQIVASMEDL-SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           P  + +  +L + L  D +S+ ++PSSI     L  + L+ C NLV LP SI  L+ L+ 
Sbjct: 169 PSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQE 228

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEPPA 185
           L L GC KLE++P  +  +ESL+ L ++  ++ +    I    N+R+LY  G    E P 
Sbjct: 229 LILKGCSKLEDLPININ-LESLDRLVLNDCSMLKRFPEI--STNVRALYLCGTAIEEVPL 285

Query: 186 SA-SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           S  SW      + L  S     +  P +  +  +T LDLSD  L E              
Sbjct: 286 SIRSWP---RLDELLMSYFDNLIEFPHVLDI--ITNLDLSDKDLQEV------------- 327

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
                       P  I  +  L+ L L+  +++ SLPQIP +L+++ A  C SL
Sbjct: 328 ------------PPLIKRISRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESL 369



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 126/243 (51%), Gaps = 13/243 (5%)

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELL 104
           +++  L+ LR ++LS    LK+ P +  ++ +L KL+L G +S+ ++PS I     LE L
Sbjct: 5   LSVQPLQNLRQMDLSYSVNLKELPDLSTAI-NLRKLFLSGCSSLIKLPSCIGNATNLEDL 63

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV--SGTAIRRP 162
            LN C +LV LPS  + + +L+ L L  C  L  +P ++G   +L ELD+    + IR P
Sbjct: 64  DLNGCSSLVELPSFGDAI-NLQKLLLRHCSNLVELP-SIGNAINLRELDLYYCSSLIRLP 121

Query: 163 TSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT 219
            SSI    NL  L  +GC+   E P+S    ++L    L    C   L LPS  G     
Sbjct: 122 -SSIGNAINLLILDLNGCSNLLELPSSIGNAINL--QKLDLRRCAKLLELPSSIGNAINL 178

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQ 278
           +  L D       +PS I N  +L  + L N +N V LP SI  L  L+EL L+ C +L+
Sbjct: 179 QNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLE 238

Query: 279 SLP 281
            LP
Sbjct: 239 DLP 241



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 34/280 (12%)

Query: 14  GTSITEVPSSIELLTGLEL--LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
             ++ E+P   +L T + L  L L GC +L  LP  I +   L  L+L+GCS L + P  
Sbjct: 21  SVNLKELP---DLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSF 77

Query: 72  VASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
             ++ +L KL L   S + E+PS I     L  L L  C +L+RLPSSI    +L  L+L
Sbjct: 78  GDAI-NLQKLLLRHCSNLVELPS-IGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDL 135

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           +GC  L  +P ++G   +L++LD+   A +    SSI    NL+       N      S 
Sbjct: 136 NGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQ-------NLLLDDCSS 188

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            L LP                S+    +L  ++LS+C      +P  I NL  L+EL L 
Sbjct: 189 LLKLP---------------SSIGNATNLVYMNLSNCS-NLVELPLSIGNLQKLQELILK 232

Query: 250 R-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
             +    LP +I+ L +L+ L L DC  L+  P+I  N++
Sbjct: 233 GCSKLEDLPININ-LESLDRLVLNDCSMLKRFPEISTNVR 271



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEIHLEGT 739
             L+ L LNGC NL  LP +I     L  L+L   +K  E P  I ++ +    +  + +
Sbjct: 128 INLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCS 187

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           ++  LP+SI   +  +  NL +C NL  LP +I  L+ L+ +   GCSKL+++   +  +
Sbjct: 188 SLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-L 246

Query: 800 ESLE 803
           ESL+
Sbjct: 247 ESLD 250



 Score = 40.4 bits (93), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 3/123 (2%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD-QLLEIHLEGTA 740
            L  L LNGC +L  LP    A+  L  L L   S   E P I ++ + + L+++   + 
Sbjct: 59  NLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNLVELPSIGNAINLRELDLYYCSSL 117

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           IR LP+SI      ++ +L  C NL  LPS+I    +L+ +    C+KL  +  ++G   
Sbjct: 118 IR-LPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAI 176

Query: 801 SLE 803
           +L+
Sbjct: 177 NLQ 179


>gi|357449965|ref|XP_003595259.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
 gi|355484307|gb|AES65510.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
          Length = 1061

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D T++  +  S+  L  L LL+ + C  L  L   I+ L  L +L++ GCS+LK FP+++
Sbjct: 697 DCTNLITIHRSVGFLNKLMLLSTQRCNQLKLLVPNIN-LPSLESLDMRGCSRLKSFPEVL 755

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             ME++  +YLD TSI ++P SI  L GLE L+L ECK+L +LP SI  L  L  + +  
Sbjct: 756 GVMENIRDVYLDQTSIDKLPVSIGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVYD 815

Query: 133 C 133
           C
Sbjct: 816 C 816



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T++  +  ++  L  L+ L+   C  L+ L   I+ L  L +L++ G S+ + FPE
Sbjct: 695 LDDCTNLITIHRSVGFLNKLMLLSTQRCNQLKLLVPNIN-LPSLESLDMRGCSRLKSFPE 753

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +    + + +++L+ T+I  LP SI  L G     L++CK+L  LP +I  L  L ++  
Sbjct: 754 VLGVMENIRDVYLDQTSIDKLPVSIGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMV 813

Query: 784 SGC 786
             C
Sbjct: 814 YDC 816



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+++ D+YLD TSI ++P SI  L GLE L L+ CK+L+ LP +I  L  L  + + 
Sbjct: 755 LGVMENIRDVYLDQTSIDKLPVSIGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVY 814

Query: 61  GCSKLKKF 68
            C   + F
Sbjct: 815 DCRGFQLF 822



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 7/162 (4%)

Query: 142 TLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC-NEPPASASWHLHLPFNLLGK 200
           +L   ESL  LD  G  +     S+  + NL +L    C N      S        LL  
Sbjct: 660 SLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLITIHRSVGFLNKLMLLST 719

Query: 201 SSC-PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
             C  + L++P++  + SL  LD+  C   ++  P  +  + +++++YL++ +   LP S
Sbjct: 720 QRCNQLKLLVPNIN-LPSLESLDMRGCSRLKS-FPEVLGVMENIRDVYLDQTSIDKLPVS 777

Query: 260 ISGLLNLEELELEDCKRLQSLP---QIPPNLQFVRANGCSSL 298
           I  L+ LE L L +CK L  LP   +I P L  +    C   
Sbjct: 778 IGNLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVYDCRGF 819



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 66/247 (26%)

Query: 617 MISVD-SGCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSD--GTDI 670
           +I +D +GC+  +   +  GR+ VR++S  EPG  SRLW +     DI+ VL +  GTD 
Sbjct: 520 LIKIDVNGCVRMHDLVQDMGREIVRQESSVEPGRRSRLWFD----DDIIHVLEENTGTDT 575

Query: 671 RELSL--------------AIELLFGLVQLTLNGC---KNLERLPRTISALKY------- 706
            E+ +              A + +  L  L +      K+ ++LP ++  L +       
Sbjct: 576 IEVIIINLCNDKEVHWSGKAFKKMKNLKILIIRSARFSKDPQKLPNSLRVLDWSGYPSQS 635

Query: 707 -------------------------------LSTLNLSGLSKFREFPEITSSRDQLLEIH 735
                                          LS L+  G     E P ++   +      
Sbjct: 636 LPGDFNPKKLMILSLHESSLVSFKSLKVFESLSFLDFEGCKLLTELPSLSGLVNLGALCL 695

Query: 736 LEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
            + T +  +  S+  L+  +L + + C  LK L   IN L SL  +   GCS+LK+  E 
Sbjct: 696 DDCTNLITIHRSVGFLNKLMLLSTQRCNQLKLLVPNIN-LPSLESLDMRGCSRLKSFPEV 754

Query: 796 LGKVESL 802
           LG +E++
Sbjct: 755 LGVMENI 761



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 23/129 (17%)

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI--------------N 120
            E LS L  +G  +     S+  L  L  L L++C NL+ +  S+              N
Sbjct: 664 FESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLITIHRSVGFLNKLMLLSTQRCN 723

Query: 121 GLK---------SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
            LK         SL++L++ GC +L++ P+ LG +E++ ++ +  T+I +   SI  +  
Sbjct: 724 QLKLLVPNINLPSLESLDMRGCSRLKSFPEVLGVMENIRDVYLDQTSIDKLPVSIGNLVG 783

Query: 172 LRSLYFSGC 180
           L  L+   C
Sbjct: 784 LERLFLREC 792


>gi|108740395|gb|ABG01553.1| disease resistance protein [Arabidopsis thaliana]
          Length = 414

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 144/294 (48%), Gaps = 38/294 (12%)

Query: 9   DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
           DLY   +S+  +PSSI     L +L L GC NL  LP +I +   L+ L+L  C+KL + 
Sbjct: 110 DLYY-CSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLEL 168

Query: 69  PQIVASMEDL-SKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKT 127
           P  + +  +L + L  D +S+ ++PSSI     L  + L+ C NLV LP SI  L+ L+ 
Sbjct: 169 PSSIGNAINLQNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQE 228

Query: 128 LNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG--CNEPPA 185
           L L GC KLE++P  +  +ESL+ L ++  ++ +    I    N+R+LY  G    E P 
Sbjct: 229 LILKGCSKLEDLPININ-LESLDRLVLNDCSMLKRFPEI--STNVRALYLCGTAIEEVPL 285

Query: 186 SA-SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
           S  SW      + L  S     +  P +  +  +T LDLSD  L E              
Sbjct: 286 SIRSWP---RLDELLMSYFDNLIEFPHVLDI--ITNLDLSDKDLQEV------------- 327

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
                       P  I  +  L+ L L+  +++ SLPQIP +L+++ A  C SL
Sbjct: 328 ------------PPLIKRISRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESL 369



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 126/243 (51%), Gaps = 13/243 (5%)

Query: 46  VTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELL 104
           +++  L+ LR ++LS    LK+ P +  ++ +L KL+L G +S+ ++PS I     LE L
Sbjct: 5   LSVQPLQNLRQMDLSYSVNLKELPDLSTAI-NLRKLFLSGCSSLIKLPSCIGNATNLEDL 63

Query: 105 YLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV--SGTAIRRP 162
            LN C +LV LPS  + + +L+ L L  C  L  +P ++G   +L ELD+    + IR P
Sbjct: 64  DLNGCSSLVELPSFGDAI-NLQKLLLRHCSNLVELP-SIGNAINLRELDLYYCSSLIRLP 121

Query: 163 TSSIFLMKNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLT 219
            SSI    NL  L  +GC+   E P+S    ++L    L    C   L LPS  G     
Sbjct: 122 -SSIGNAINLLILDLNGCSNLLELPSSIGNAINL--QKLDLRRCAKLLELPSSIGNAINL 178

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQ 278
           +  L D       +PS I N  +L  + L N +N V LP SI  L  L+EL L+ C +L+
Sbjct: 179 QNLLLDDCSSLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLE 238

Query: 279 SLP 281
            LP
Sbjct: 239 DLP 241



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 34/280 (12%)

Query: 14  GTSITEVPSSIELLTGLEL--LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
             ++ E+P   +L T + L  L L GC +L  LP  I +   L  L+L+GCS L + P  
Sbjct: 21  SVNLKELP---DLSTAINLRKLFLSGCSSLIKLPSCIGNATNLEDLDLNGCSSLVELPSF 77

Query: 72  VASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
             ++ +L KL L   S + E+PS I     L  L L  C +L+RLPSSI    +L  L+L
Sbjct: 78  GDAI-NLQKLLLRHCSNLVELPS-IGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDL 135

Query: 131 SGCCKLENVPDTLGKVESLEELDVSGTA-IRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
           +GC  L  +P ++G   +L++LD+   A +    SSI    NL+       N      S 
Sbjct: 136 NGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQ-------NLLLDDCSS 188

Query: 190 HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
            L LP                S+    +L  ++LS+C      +P  I NL  L+EL L 
Sbjct: 189 LLKLP---------------SSIGNATNLVYMNLSNCS-NLVELPLSIGNLQKLQELILK 232

Query: 250 R-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
             +    LP +I+ L +L+ L L DC  L+  P+I  N++
Sbjct: 233 GCSKLEDLPININ-LESLDRLVLNDCSMLKRFPEISTNVR 271



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)

Query: 681 FGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE-ITSSRDQLLEIHLEGT 739
             L+ L LNGC NL  LP +I     L  L+L   +K  E P  I ++ +    +  + +
Sbjct: 128 INLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCS 187

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKV 799
           ++  LP+SI   +  +  NL +C NL  LP +I  L+ L+ +   GCSKL+++   +  +
Sbjct: 188 SLLKLPSSIGNATNLVYMNLSNCSNLVELPLSIGNLQKLQELILKGCSKLEDLPININ-L 246

Query: 800 ESLE 803
           ESL+
Sbjct: 247 ESLD 250



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 3/123 (2%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD-QLLEIHLEGTA 740
            L  L LNGC +L  LP    A+  L  L L   S   E P I ++ + + L+++   + 
Sbjct: 59  NLEDLDLNGCSSLVELPSFGDAIN-LQKLLLRHCSNLVELPSIGNAINLRELDLYYCSSL 117

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           IR LP+SI      ++ +L  C NL  LPS+I    +L+ +    C+KL  +  ++G   
Sbjct: 118 IR-LPSSIGNAINLLILDLNGCSNLLELPSSIGNAINLQKLDLRRCAKLLELPSSIGNAI 176

Query: 801 SLE 803
           +L+
Sbjct: 177 NLQ 179


>gi|456876344|gb|EMF91453.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 1300

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 29/264 (10%)

Query: 9    DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
            +L LD       P+++     L  L+++ C NL+ +P +I +L  L  L L G +KL   
Sbjct: 904  ELDLDWIKFERFPTAVTTFKSLTSLSMRNC-NLTEIPESIGNLGRLTKLNL-GSNKLSAL 961

Query: 69   PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
            P  +  +E L  LYLD    +  P ++  L  LE+L +     +  L   I  L SLK L
Sbjct: 962  PAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLEMLNVR-SNQIPSLSEGIGTLASLKDL 1020

Query: 129  NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
            NL G  +L +VP  + K+  L ELD+    + +   ++ L+KNLR               
Sbjct: 1021 NLQGN-QLSDVPSAISKIPQLTELDLGKNKLTKFPEAVTLIKNLR--------------- 1064

Query: 189  WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                    +L  S   +A +  S+  + +L  LDL D  +   ++P+ ++ L +L  L L
Sbjct: 1065 --------VLDLSENQIASIPDSIGAISTLEVLDLEDLPIN--SLPAQLEKLEALISLRL 1114

Query: 249  NRNNFVTLPASISGLLNLEELELE 272
             +   V +P  ++ + +L+ +  E
Sbjct: 1115 QKTKLVDVPDFLASMKSLKNIYFE 1138



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 92/177 (51%), Gaps = 4/177 (2%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  ++ L  LYLD    +  P ++  L  LE+L ++    + SL   I +L  L+ L L 
Sbjct: 965  IGKLEQLIHLYLDSNQFSIFPDAVLSLKNLEMLNVR-SNQIPSLSEGIGTLASLKDLNLQ 1023

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            G ++L   P  ++ +  L++L L    + + P ++ L+  L +L L+E + +  +P SI 
Sbjct: 1024 G-NQLSDVPSAISKIPQLTELDLGKNKLTKFPEAVTLIKNLRVLDLSENQ-IASIPDSIG 1081

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
             + +L+ L+L     + ++P  L K+E+L  L +  T +      +  MK+L+++YF
Sbjct: 1082 AISTLEVLDLEDLP-INSLPAQLEKLEALISLRLQKTKLVDVPDFLASMKSLKNIYF 1137



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 123/301 (40%), Gaps = 58/301 (19%)

Query: 7    LSDLYLDGTSITEVPSSIELLTGLELLT----------LKGCKNLSSLPVTISSLKCLRT 56
            ++ LY+  +        ++  T LE LT          L+  KNL  + +   ++K L  
Sbjct: 809  ITKLYIRSSDKITSFQELKFFTRLEELTIIEPIQDVSVLEELKNLKKIELQKWNVKDL-- 866

Query: 57   LELSGCSKLKK----FPQIVASMEDLS----------KLYLDGTSIAEVPSSIELLPGLE 102
            + L+ C++L+K    + Q   S  D S          +L LD       P+++     L 
Sbjct: 867  VVLNSCAQLEKVELRYIQGFESDFDCSGLLKDSKAKIELDLDWIKFERFPTAVTTFKSLT 926

Query: 103  LLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRP 162
             L +  C NL  +P SI  L  L  LNL G  KL  +P  +GK+E L  L +        
Sbjct: 927  SLSMRNC-NLTEIPESIGNLGRLTKLNL-GSNKLSALPAGIGKLEQLIHLYLDSNQFSIF 984

Query: 163  TSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLT-GVCSLTKL 221
              ++  +KNL  L                                 +PSL+ G+ +L  L
Sbjct: 985  PDAVLSLKNLEMLNVRSNQ---------------------------IPSLSEGIGTLASL 1017

Query: 222  -DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSL 280
             DL+  G   + +PS I  +  L EL L +N     P +++ + NL  L+L +  ++ S+
Sbjct: 1018 KDLNLQGNQLSDVPSAISKIPQLTELDLGKNKLTKFPEAVTLIKNLRVLDLSE-NQIASI 1076

Query: 281  P 281
            P
Sbjct: 1077 P 1077


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 308 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 353


>gi|39104560|dbj|BAC41800.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 977

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 55/337 (16%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGL 101
           SLP+T    +CL  L + G SKL+K    +  + +L K+ L  +S + E+P+ +     L
Sbjct: 451 SLPLTFKP-ECLVELYM-GFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNL 507

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           + L L  C++LV +PSSI  L+ L+ L  SGC KL+ +P  +  + SLEE+++S  +  R
Sbjct: 508 KTLTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLR 566

Query: 162 PTSSIFLMKNLRSLYFSG--CNEPPASASWHL-HLPFNLLGKSSCPVALMLPSLTGVCSL 218
               I    N++ LY +G    E PAS   H   L F  +G  S      +P      S+
Sbjct: 567 SFPDI--SSNIKRLYVAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPE-----SV 619

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQ 278
           T LDL +         SDI                  +P  + GL +L  L +E+C +L 
Sbjct: 620 THLDLRN---------SDIK----------------MIPDCVIGLPHLVSLLVENCTKLV 654

Query: 279 SLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYL 338
           S+    P+L  + A+ C SL ++  +     SK    NC   LKL +++   I       
Sbjct: 655 SIQGHSPSLVTLFADHCISLKSVCCSFHGPISKLMFYNC---LKLDKESKRGI------- 704

Query: 339 ELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVT 375
               +   G+K SI  PG +IP  F +Q  G+ IT++
Sbjct: 705 ----IQQSGNK-SICLPGKEIPAEFTHQTIGNLITIS 736



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L  +GC  L+ +P  I+ L  L  +N+S  S+ R FP+I+S+  +L   ++ GT I+
Sbjct: 531 LEMLYASGCIKLQVIPTNIN-LASLEEVNMSNCSRLRSFPDISSNIKRL---YVAGTMIK 586

Query: 743 GLPASI 748
             PASI
Sbjct: 587 EFPASI 592



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 25/129 (19%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L + G   LE+L   I  L  L  +NL   S  +E P ++           + T ++
Sbjct: 461 LVELYM-GFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLS-----------KATNLK 508

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L              L  C++L  +PS+I  L+ L M+Y SGC KL+ +   +      
Sbjct: 509 TL-------------TLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNINLASLE 555

Query: 803 EVRLSSWNR 811
           EV +S+ +R
Sbjct: 556 EVNMSNCSR 564


>gi|357449987|ref|XP_003595270.1| Heat shock protein [Medicago truncatula]
 gi|355484318|gb|AES65521.1| Heat shock protein [Medicago truncatula]
          Length = 1819

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 1/121 (0%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           D T++  V  S+  L  L LL+ + C  L  L   I+ L  L TL++ GC +LK FP+++
Sbjct: 656 DCTNLIAVHKSVGFLNKLVLLSTQRCNQLELLVPNIN-LPSLETLDMRGCLRLKSFPEVL 714

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             ME++  +YLD TSI ++P SI  L GL  L+L EC +L +LP SI+ L  L+ +   G
Sbjct: 715 GVMENIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEIITAYG 774

Query: 133 C 133
           C
Sbjct: 775 C 775



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 1/123 (0%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           L D T++  +  ++  L  LV L+   C  LE L   I+ L  L TL++ G  + + FPE
Sbjct: 654 LDDCTNLIAVHKSVGFLNKLVLLSTQRCNQLELLVPNIN-LPSLETLDMRGCLRLKSFPE 712

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           +    + +  ++L+ T+I  LP SI  L G     L++C +L  LP +I+ L  L ++  
Sbjct: 713 VLGVMENIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEIITA 772

Query: 784 SGC 786
            GC
Sbjct: 773 YGC 775



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 10/186 (5%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP   N  K L  L+L   C +     +L   ESL  LD  G  +     S+  + NL +
Sbjct: 595 LPGDFNP-KKLMMLSLHESCLIS--FKSLKVFESLSFLDFEGCKLLTELPSLSGLVNLGA 651

Query: 175 LYFSGC-NEPPASASWHLHLPFNLLGKSSC-PVALMLPSLTGVCSLTKLDLSDCGLGEAA 232
           L    C N      S        LL    C  + L++P++  + SL  LD+  C L   +
Sbjct: 652 LCLDDCTNLIAVHKSVGFLNKLVLLSTQRCNQLELLVPNIN-LPSLETLDMRGC-LRLKS 709

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP---QIPPNLQF 289
            P  +  + +++ +YL++ +   LP SI  L+ L +L L +C  L  LP    I P L+ 
Sbjct: 710 FPEVLGVMENIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEI 769

Query: 290 VRANGC 295
           + A GC
Sbjct: 770 ITAYGC 775



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 12/110 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  M+++  +YLD TSI ++P SI  L GL  L L+ C +L+ LP +I  L  L  +   
Sbjct: 714 LGVMENIRYVYLDQTSIDKLPFSIRNLVGLRQLFLRECASLTQLPDSIHILPKLEIITAY 773

Query: 61  GCSKL-----------KKFPQIVASMEDLSKLYLDGTSIAEVP-SSIELL 98
           GC              K FP+ +   ++ S + LD +S+   P ++IE+ 
Sbjct: 774 GCIGFRLFEDKEKVGSKVFPKAMLVYKEGSPVLLDMSSLNICPDNAIEVF 823



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 23/129 (17%)

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN-------------- 120
            E LS L  +G  +     S+  L  L  L L++C NL+ +  S+               
Sbjct: 623 FESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLIAVHKSVGFLNKLVLLSTQRCN 682

Query: 121 ---------GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKN 171
                     L SL+TL++ GC +L++ P+ LG +E++  + +  T+I +   SI  +  
Sbjct: 683 QLELLVPNINLPSLETLDMRGCLRLKSFPEVLGVMENIRYVYLDQTSIDKLPFSIRNLVG 742

Query: 172 LRSLYFSGC 180
           LR L+   C
Sbjct: 743 LRQLFLREC 751



 Score = 43.1 bits (100), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 25/203 (12%)

Query: 617 MISVD-SGCMSCY---KKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDGTDIRE 672
           +I +D +GC+  +   +  GR+ VR++S  EPG  SRLW +     DI+ VL + T    
Sbjct: 479 LIKIDGNGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWSD----DDIIHVLEENTGTDT 534

Query: 673 LSLAIELLFGLVQLTLNGC-----KNLE-------RLPRTISAL-KYLSTLNLSGLSKFR 719
           + + I  L+   ++  +G      KNL+       R  R    L   L  L+ SG S   
Sbjct: 535 VEVIIIDLYNDKEVQWSGTAFENMKNLKILIIRSARFSRGPKKLPNSLGVLDWSGYSSQS 594

Query: 720 EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
              +    +  +L +H E   I     S+++       + + CK L  LPS ++GL +L 
Sbjct: 595 LPGDFNPKKLMMLSLH-ESCLISF--KSLKVFESLSFLDFEGCKLLTELPS-LSGLVNLG 650

Query: 780 MMYPSGCSKLKNVTETLGKVESL 802
            +    C+ L  V +++G +  L
Sbjct: 651 ALCLDDCTNLIAVHKSVGFLNKL 673


>gi|356559367|ref|XP_003547971.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 142/359 (39%), Gaps = 65/359 (18%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLELLYLNECKNL 112
           L  L L  C  L + P  V+ +  L KL +    ++  +  S+ LL  L++LY   C  L
Sbjct: 632 LTILNLDKCDSLTEIPD-VSCLSKLEKLSFARCRNLFTIHYSVGLLEKLKILYAGGCPEL 690

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              P     L SL+   LSGC  LE+ P+ LGK+E++  LD+    I+    S   +  L
Sbjct: 691 KSFPPL--KLTSLEQFELSGCHNLESFPEILGKMENITVLDLDECRIKEFRPSFRNLTRL 748

Query: 173 RSLYFSG-----------------CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGV 215
           + LY                    C  P  +      L + LL     P  ++  S    
Sbjct: 749 QELYLGQETYRLRGFDAATFISNICMMPELARVEATQLQWRLL-----PDDVLKLSSVVC 803

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            S+  L+   C L +  +   +    ++K L L+ + F  +P  I     L  L L+ C 
Sbjct: 804 SSMQHLEFIGCDLSDELLWLFLSCFVNVKNLNLSASKFTVIPECIKDCRFLTTLTLDYCD 863

Query: 276 RLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLR 335
           RLQ +  IPPNL++  A GC +L +                             +ISML+
Sbjct: 864 RLQEIRGIPPNLKYFSALGCLALTS----------------------------SSISMLQ 895

Query: 336 EYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCV 394
              EL  V D       + P  +IP WF   + G SI      + +  NK+    +C V
Sbjct: 896 NQ-ELHEVGDT----FFILPSGKIPGWFECHSRGPSI------FFWFRNKLPAIVVCFV 943


>gi|414885042|tpg|DAA61056.1| TPA: hypothetical protein ZEAMMB73_132612 [Zea mays]
          Length = 1075

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 134/284 (47%), Gaps = 26/284 (9%)

Query: 33  LTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVP 92
           L  K    L  +   +S  K LR L++SGCS +K+ P  +  M+ L  L     SIA++P
Sbjct: 495 LVFKSSAELQHVSEVLSVNKYLRVLDISGCS-VKEMPAPIFQMKQLRYLDASTLSIADLP 553

Query: 93  SSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEEL 152
             I   P L+ L L++ + +  LP+ I  LK L  LNL GC KL+ + + L  +  L  L
Sbjct: 554 PQISGFPKLQTLDLSDTE-VTELPAFIANLKRLNYLNLQGCKKLKQL-NNLDLLHELHYL 611

Query: 153 DVSG-TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVAL---- 207
           ++S    +R   +S+  ++ LR L  S C++ P        LP  LL   S   ++    
Sbjct: 612 NLSRCLEVRSFPASLKNLRKLRFLNLSQCSKLPT-------LPDELLQSFSSFSSIVDLN 664

Query: 208 -------MLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                  MLP   G +CSL  L LS C   E  +P     L  LK L L+  + + LP S
Sbjct: 665 LSGFEFQMLPDFFGNICSLQFLSLSKCSKLE-LLPQSFGQLAYLKGLDLSFCSDLKLPES 723

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRANGCSSLVTL 301
              L +L+ L L  C  ++ LP      NL+++  + C+ L  L
Sbjct: 724 FKYLSSLQFLNLSHCHNVEYLPSFDKLSNLEYLNLSQCAGLKAL 767



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 138/304 (45%), Gaps = 36/304 (11%)

Query: 5   KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
           K L  L + G S+ E+P+ I  +  L  L      +++ LP  IS    L+TL+LS  ++
Sbjct: 514 KYLRVLDISGCSVKEMPAPIFQMKQLRYLDASTL-SIADLPPQISGFPKLQTLDLSD-TE 571

Query: 65  LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           + + P  +A+++ L+ L L G    +  ++++LL  L  L L+ C  +   P+S+  L+ 
Sbjct: 572 VTELPAFIANLKRLNYLNLQGCKKLKQLNNLDLLHELHYLNLSRCLEVRSFPASLKNLRK 631

Query: 125 LKTLNLSGCCKLENVPDTL----GKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           L+ LNLS C KL  +PD L        S+ +L++SG          F  + L   + + C
Sbjct: 632 LRFLNLSQCSKLPTLPDELLQSFSSFSSIVDLNLSG----------FEFQMLPDFFGNIC 681

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           +                L  S C    +LP S   +  L  LDLS C   +  +P     
Sbjct: 682 S-------------LQFLSLSKCSKLELLPQSFGQLAYLKGLDLSFC--SDLKLPESFKY 726

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQI---PPNLQFVRANGCS 296
           L SL+ L L+  + V    S   L NLE L L  C  L++LP+      NLQ +   GC 
Sbjct: 727 LSSLQFLNLSHCHNVEYLPSFDKLSNLEYLNLSQCAGLKALPKSLSNQKNLQ-IEVFGCQ 785

Query: 297 SLVT 300
             + 
Sbjct: 786 DCIV 789



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 112/246 (45%), Gaps = 15/246 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A++K L+ L L G    +  ++++LL  L  L L  C  + S P ++ +L+ LR L LS
Sbjct: 579 IANLKRLNYLNLQGCKKLKQLNNLDLLHELHYLNLSRCLEVRSFPASLKNLRKLRFLNLS 638

Query: 61  GCSKLKKFP----QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            CSKL   P    Q  +S   +  L L G     +P     +  L+ L L++C  L  LP
Sbjct: 639 QCSKLPTLPDELLQSFSSFSSIVDLNLSGFEFQMLPDFFGNICSLQFLSLSKCSKLELLP 698

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLY 176
            S   L  LK L+LS C  L+ +P++   + SL+ L++S         S   + NL  L 
Sbjct: 699 QSFGQLAYLKGLDLSFCSDLK-LPESFKYLSSLQFLNLSHCHNVEYLPSFDKLSNLEYLN 757

Query: 177 FSGC---NEPPASASWHLHLPFNLLGKSSCPV-ALMLPSLTGVCSL------TKLDLSDC 226
            S C      P S S   +L   + G   C V +  L   +  CS       +  D+SD 
Sbjct: 758 LSQCAGLKALPKSLSNQKNLQIEVFGCQDCIVQSCYLSPQSHTCSQEVKEVGSSSDISDT 817

Query: 227 GLGEAA 232
            L E+A
Sbjct: 818 ILKESA 823



 Score = 42.7 bits (99), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 697 LPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNIL 756
           LP  IS    L TL+LS  ++  E P   ++  +L  ++L+G        +++LL     
Sbjct: 552 LPPQISGFPKLQTLDLSD-TEVTELPAFIANLKRLNYLNLQGCKKLKQLNNLDLLHELHY 610

Query: 757 SNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETL 796
            NL  C  ++S P+++  LR LR +  S CSKL  + + L
Sbjct: 611 LNLSRCLEVRSFPASLKNLRKLRFLNLSQCSKLPTLPDEL 650



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 25/121 (20%)

Query: 686 LTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP 745
           L+L+ C  LE LP++   L YL  L+LS  S  +                        LP
Sbjct: 686 LSLSKCSKLELLPQSFGQLAYLKGLDLSFCSDLK------------------------LP 721

Query: 746 ASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
            S + LS     NL  C N++ LPS  + L +L  +  S C+ LK + ++L   ++L++ 
Sbjct: 722 ESFKYLSSLQFLNLSHCHNVEYLPS-FDKLSNLEYLNLSQCAGLKALPKSLSNQKNLQIE 780

Query: 806 L 806
           +
Sbjct: 781 V 781


>gi|255553891|ref|XP_002517986.1| hypothetical protein RCOM_1176340 [Ricinus communis]
 gi|223542968|gb|EEF44504.1| hypothetical protein RCOM_1176340 [Ricinus communis]
          Length = 453

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 29  GLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS- 87
           G+  L L GC  L  LP++I+ L  L  L L GC  LK  P+ +  M+ L +L + G S 
Sbjct: 244 GITKLNLSGCSQLEELPMSIALLARLIFLNLQGCENLKILPESIGDMKALQELNILGCSK 303

Query: 88  IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL 143
             E+P SI LL  + +L L +C+NL  LP SI  LKSL+ LN+SGC KLE +  TL
Sbjct: 304 FEELPESIGLLTHIVILNLQDCENLKHLPGSIGDLKSLEKLNMSGCSKLEELDVTL 359



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 84/153 (54%), Gaps = 24/153 (15%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
           LS  + + EL ++I LL  L+ L L GC+NL+ LP +I  +K L  LN+ G SKF E PE
Sbjct: 250 LSGCSQLEELPMSIALLARLIFLNLQGCENLKILPESIGDMKALQELNILGCSKFEELPE 309

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
                                  SI LL+  ++ NL+DC+NLK LP +I  L+SL  +  
Sbjct: 310 -----------------------SIGLLTHIVILNLQDCENLKHLPGSIGDLKSLEKLNM 346

Query: 784 SGCSKLKNVTETLGKVESLEVRLSSWNRPKMQN 816
           SGCSKL+ +  TL  +  L  +L++ +  K+QN
Sbjct: 347 SGCSKLEELDVTL-PLSFLSSQLNTVSLSKLQN 378



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 4/143 (2%)

Query: 42  SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPG 100
           + +P    S + + T +   C  L+K   IV   + ++KL L G S + E+P SI LL  
Sbjct: 211 AEIPNLSHSRELMETPDFEDCPSLEKL--IVKDWKGITKLNLSGCSQLEELPMSIALLAR 268

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA-I 159
           L  L L  C+NL  LP SI  +K+L+ LN+ GC K E +P+++G +  +  L++     +
Sbjct: 269 LIFLNLQGCENLKILPESIGDMKALQELNILGCSKFEELPESIGLLTHIVILNLQDCENL 328

Query: 160 RRPTSSIFLMKNLRSLYFSGCNE 182
           +    SI  +K+L  L  SGC++
Sbjct: 329 KHLPGSIGDLKSLEKLNMSGCSK 351



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 13/203 (6%)

Query: 198 LGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL-YLNRNNFVT 255
           L  S C     LP S+  +  L  L+L  C      +P  I ++ +L+EL  L  + F  
Sbjct: 248 LNLSGCSQLEELPMSIALLARLIFLNLQGCE-NLKILPESIGDMKALQELNILGCSKFEE 306

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---NGCSSLVTLFGALKLCRSKY 312
           LP SI  L ++  L L+DC+ L+ LP    +L+ +     +GCS L  L   L L     
Sbjct: 307 LPESIGLLTHIVILNLQDCENLKHLPGSIGDLKSLEKLNMSGCSKLEELDVTLPLSFLS- 365

Query: 313 TIINCIDSLKLL-RKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
           + +N +   KL  R N L   +   +  ++ V D     SI  PGS+IP  F +Q+E  +
Sbjct: 366 SQLNTVSLSKLQNRNNNLTGYVALRFFPMERVFD-----SISVPGSEIPDLFSHQSEYDA 420

Query: 372 ITVTRPSYLYNVNKVVGFAICCV 394
           I++     +   +K +  A C V
Sbjct: 421 ISLQVTPLVNEGSKSMCIATCTV 443


>gi|308171398|gb|ADO15993.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171402|gb|ADO15995.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171404|gb|ADO15996.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171406|gb|ADO15997.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 142/346 (41%), Gaps = 76/346 (21%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNL 112
           LR L    C  L + P  V+ + +L +   +   ++  V +SI  L  L++L    CK L
Sbjct: 636 LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              P     L SL+ LNLS C  LE+ P  LGK+E++ +L +S ++I     S   +  L
Sbjct: 695 RSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL-------------- 218
           R L               L L  + + K    + LM P LT + +L              
Sbjct: 753 RGLEL-------------LFLSPHTIFKVPSSIVLM-PELTVIRALGLKGWQWLKQEEGE 798

Query: 219 -----------TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
                        L +S C L +     D      +KEL L++NNF  LP  I     L 
Sbjct: 799 EKTGSIVSSMVEMLTVSSCNLCDEFFSIDFTWFAHMKELCLSKNNFTILPECIKECQFLR 858

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN 327
           +L++  CK L+ +  IPPNL+   A  C SL +                           
Sbjct: 859 KLDVCGCKHLREIRGIPPNLKHFFAINCKSLTS--------------------------- 891

Query: 328 GLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
               S +R++L  Q + + G+ +    PG +IP+WF  Q+ G SI+
Sbjct: 892 ----SSIRKFLN-QELHEAGNTV-FCLPGKRIPEWFDQQSRGPSIS 931


>gi|145332743|ref|NP_001078237.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145339123|ref|NP_190053.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644407|gb|AEE77928.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644408|gb|AEE77929.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 67/303 (22%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L +L L D +S+ E+PSSIE LT L+ L L+ C +L  LP   ++ K L  L L
Sbjct: 735 LSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATK-LEELYL 793

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CS L+K P  + +  +L +L L   S + E+P+ IE    L+ L L  C +L+ LP S
Sbjct: 794 ENCSSLEKLPPSINA-NNLQQLSLINCSRVVELPA-IENATNLQKLDLGNCSSLIELPLS 851

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I    +LK LN+SGC  L  +P ++G + +L+E D+S  +          +K L +L  +
Sbjct: 852 IGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININLKFLDTLNLA 911

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           GC++  +                        P ++     TK+  +DC            
Sbjct: 912 GCSQLKS-----------------------FPEIS-----TKI-FTDC----------YQ 932

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            +  L++L +N                       +C  L SLPQ+P +L ++ A+ C SL
Sbjct: 933 RMSRLRDLRIN-----------------------NCNNLVSLPQLPDSLAYLYADNCKSL 969

Query: 299 VTL 301
             L
Sbjct: 970 ERL 972



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 40/245 (16%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           SKL+K  +    + +L  + L  +  + E+P+ +     LE L L +C +LV LPSSI  
Sbjct: 703 SKLRKLWEGTKQLRNLKWMDLSNSEDLKELPN-LSTATNLEELKLRDCSSLVELPSSIEK 761

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+ L L  C  L  +P + G    LEE                       LY   C+
Sbjct: 762 LTSLQRLYLQRCSSLVELP-SFGNATKLEE-----------------------LYLENCS 797

Query: 182 E----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                PP+  + +L      L   +C   + LP++    +L KLDL +C      +P  I
Sbjct: 798 SLEKLPPSINANNLQ----QLSLINCSRVVELPAIENATNLQKLDLGNCS-SLIELPLSI 852

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---N 293
               +LKEL ++  ++ V LP+SI  + NL+E +L +C  L  LP I  NL+F+      
Sbjct: 853 GTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELP-ININLKFLDTLNLA 911

Query: 294 GCSSL 298
           GCS L
Sbjct: 912 GCSQL 916



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 22/140 (15%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + +  +L +L + G +S+ ++PSSI  +T L+   L  C NL  LP+ I+ LK L TL L
Sbjct: 852 IGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININ-LKFLDTLNL 910

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           +GCS+LK FP+I       +K++ D           + +  L  L +N C NLV LP   
Sbjct: 911 AGCSQLKSFPEIS------TKIFTD---------CYQRMSRLRDLRINNCNNLVSLPQLP 955

Query: 120 NGLKSL-----KTLNLSGCC 134
           + L  L     K+L    CC
Sbjct: 956 DSLAYLYADNCKSLERLDCC 975



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 44/173 (25%)

Query: 646 NCSRLWE-EADEFPDIVQVLSDG--TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NCSR+ E  A E    +Q L  G  + + EL L+I     L +L ++GC +L +LP +I 
Sbjct: 818 NCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIG 877

Query: 703 A-----------------------LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
                                   LK+L TLNL+G S+ + FPEI++      + +   +
Sbjct: 878 DITNLKEFDLSNCSNLVELPININLKFLDTLNLAGCSQLKSFPEISTK--IFTDCYQRMS 935

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            +R L              + +C NL SLP   +   SL  +Y   C  L+ +
Sbjct: 936 RLRDL-------------RINNCNNLVSLPQLPD---SLAYLYADNCKSLERL 972



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 26/179 (14%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   +  ++  + LS+  D++EL   +     L +L L  C +L  LP +I  L  L
Sbjct: 707 KLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDCSSLVELPSSIEKLTSL 765

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASI-----------------E 749
             L L   S   E P   ++  +L E++LE  +++  LP SI                 E
Sbjct: 766 QRLYLQRCSSLVELPSFGNAT-KLEELYLENCSSLEKLPPSINANNLQQLSLINCSRVVE 824

Query: 750 LLSGNILSNLK-----DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           L +    +NL+     +C +L  LP +I    +L+ +  SGCS L  +  ++G + +L+
Sbjct: 825 LPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLK 883


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 6/275 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L     T +P  +E L  L+ L+L G   L++LP  I  LK LR L+L+
Sbjct: 88  IGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSL-GSNRLTTLPNEIGQLKNLRVLKLT 146

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++ K  P+ +  +++L  L L    +  +P+ I  L  L+ L L   + L  LP+ I 
Sbjct: 147 -HNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNR-LTTLPNEIG 204

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L LS   +L  +P+ +G++++L+EL +    +    + I  +KNL++LY    
Sbjct: 205 QLQKLQDLYLS-TNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSN 263

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S           L   +  +      +  + +L  LDL    L    +P +I  L
Sbjct: 264 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQL--TTLPKEIGQL 321

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +L+   LN N   TLP  I  L NL+EL L D +
Sbjct: 322 KNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQ 356



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 50/258 (19%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R L LS  ++ K  P+ +  +++L +L L+   +  +P  I  L  L  L L++ +   
Sbjct: 48  VRVLNLS-ANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQ-FT 105

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            LP  +  L++LK L+L G  +L  +P+ +G++++L  L ++    +     I  +KNL+
Sbjct: 106 ILPKEVEKLENLKELSL-GSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQ 164

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAA 232
           +L   G N+  A                       LP+  G + +L  LDL    L    
Sbjct: 165 TLNL-GNNQLTA-----------------------LPNEIGQLQNLKSLDLGSNRL--TT 198

Query: 233 IPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL------------ELEDCKRLQSL 280
           +P++I  L  L++LYL+ N   TLP  I  L NL+EL            E+   K LQ+L
Sbjct: 199 LPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTL 258

Query: 281 PQIPPNLQFVRANGCSSL 298
                   ++R+N  ++L
Sbjct: 259 --------YLRSNRLTTL 268


>gi|356506534|ref|XP_003522035.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1035

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 191/457 (41%), Gaps = 72/457 (15%)

Query: 56  TLELSGCSKLKKFPQIVASMEDLSKLYLDGT----SIAEVPSSIELLP-GLELLYLNEC- 109
           +++LS   KLK  P+I + M +L  L   G      +  +P  +E LP  +  L   +C 
Sbjct: 534 SIDLSKIRKLKLGPRIFSKMSNLQFLDFHGKYNRDDMDFLPEGLEYLPSNIRYLRWKQCP 593

Query: 110 ----------KNLV----------RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESL 149
                     K+LV          +L   +  L +LK + L  C  +E +PD   K  +L
Sbjct: 594 LRSLPEKFSAKDLVILDLSDSCVQKLWDGMQNLVNLKEVRLYRCQFMEELPD-FTKATNL 652

Query: 150 EELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALML 209
           E L++S   +    SSIF +K L  L  + C       S H+HL  + L   +  +   L
Sbjct: 653 EVLNLSHCGLSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHIHL--SSLRYLNLELCHGL 710

Query: 210 PSLTGVCSLTKLDLSDCG-LGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
             L+ V S   ++L+  G  G   +PS       L+ L +  +   +LP+SI     L  
Sbjct: 711 KELS-VTSENMIELNMRGSFGLKVLPSSFGRQSKLEILVIYFSTIQSLPSSIKDCTRLRC 769

Query: 269 LELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLF------GALKLCRSKYTIINCI---- 318
           L+L  C  LQ++P++PP+L+ + AN C  L T+         LK  R K    NC+    
Sbjct: 770 LDLRHCDFLQTIPELPPSLETLLANECRYLRTVLFPSTAVEQLKENRKKIEFWNCLCLDK 829

Query: 319 DSLKLLRKNGLAISMLR--------------EYLELQAVSD--------PGHKLSIVFPG 356
            SL  +  N + I++++              +Y +   + D          ++ +  +PG
Sbjct: 830 HSLTAIELN-VQINVMKFACQHFPAPELDFDDYNDYVVIHDLQSGYEECDSYQATYAYPG 888

Query: 357 SQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELE 416
           S  PKW  Y+     + +   S    ++  +GF  C  F VPK S        Y     +
Sbjct: 889 STFPKWLEYKTTNDYVVIDLSS--GQLSHQLGFIFC--FIVPKDSKRDDKLILYITIS-D 943

Query: 417 CSMDGSGE-GHYIYFRGKFGHVVSDHLWLLFLPRHGH 452
           C  +G GE G    +  K     SDH+ +++  R  H
Sbjct: 944 C--EGEGEKGSTKMYMNKSDSTKSDHVCVMYDQRCSH 978



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 7/178 (3%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  L L    ++ V SSI  L  LE L +  C NL+ L      L  LR L L  C  L
Sbjct: 651 NLEVLNLSHCGLSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHIHLSSLRYLNLELCHGL 710

Query: 66  KKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
           K   ++  + E++ +L + G+  +  +PSS      LE+L +     +  LPSSI     
Sbjct: 711 K---ELSVTSENMIELNMRGSFGLKVLPSSFGRQSKLEILVIY-FSTIQSLPSSIKDCTR 766

Query: 125 LKTLNLSGCCKLENVPDTLGKVESL--EELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
           L+ L+L  C  L+ +P+    +E+L   E     T +   T+   L +N + + F  C
Sbjct: 767 LRCLDLRHCDFLQTIPELPPSLETLLANECRYLRTVLFPSTAVEQLKENRKKIEFWNC 824


>gi|418745448|ref|ZP_13301788.1| putative molybdate metabolism regulator MolR [Leptospira santarosai
            str. CBC379]
 gi|410793910|gb|EKR91825.1| putative molybdate metabolism regulator MolR [Leptospira santarosai
            str. CBC379]
          Length = 1610

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 29/264 (10%)

Query: 9    DLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF 68
            +LYLD T     P+++     L  L+++ C N + +P +I +LK L  L L G +KL   
Sbjct: 1214 ELYLDSTKFERFPTAVSTFKSLTSLSMRDC-NFTEIPESIGNLKRLTDLNL-GKNKLSAL 1271

Query: 69   PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL 128
            P  +  +E L  LYLD    +  P ++  L  L+LL++     +V LP  I  + SLK L
Sbjct: 1272 PAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLQLLWIR-WNQIVSLPDGIGQMSSLKDL 1330

Query: 129  NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
            +L    +L +VP  + K+  L +L +      +   ++ L+KNLR               
Sbjct: 1331 SLHE-NQLSDVPSGISKMPQLADLKLGKNKFTKFPEAVTLIKNLR--------------- 1374

Query: 189  WHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                    +L  S   +  +  S+  + +L  LDL D  +   ++P+ ++ L +L ++ L
Sbjct: 1375 --------ILDLSENQITSIPDSIGAISTLEVLDLEDLPIN--SLPAQLEKLEALTDIRL 1424

Query: 249  NRNNFVTLPASISGLLNLEELELE 272
             +     +P  ++ + +L+ +  E
Sbjct: 1425 QKTKLKDVPDFLASMKSLKNIYFE 1448



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 91/177 (51%), Gaps = 4/177 (2%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            +  ++ L  LYLD    +  P ++  L  L+LL ++    + SLP  I  +  L+ L L 
Sbjct: 1275 IGKLEQLIHLYLDSNQFSIFPDAVLSLKNLQLLWIR-WNQIVSLPDGIGQMSSLKDLSLH 1333

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
              ++L   P  ++ M  L+ L L      + P ++ L+  L +L L+E + +  +P SI 
Sbjct: 1334 E-NQLSDVPSGISKMPQLADLKLGKNKFTKFPEAVTLIKNLRILDLSENQ-ITSIPDSIG 1391

Query: 121  GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF 177
             + +L+ L+L     + ++P  L K+E+L ++ +  T ++     +  MK+L+++YF
Sbjct: 1392 AISTLEVLDLEDLP-INSLPAQLEKLEALTDIRLQKTKLKDVPDFLASMKSLKNIYF 1447



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 30/203 (14%)

Query: 80   KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            +LYLD T     P+++     L  L + +C N   +P SI  LK L  LNL G  KL  +
Sbjct: 1214 ELYLDSTKFERFPTAVSTFKSLTSLSMRDC-NFTEIPESIGNLKRLTDLNL-GKNKLSAL 1271

Query: 140  PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
            P  +GK+E L  L +          ++  +KNL+ L+            W+         
Sbjct: 1272 PAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLQLLWIR----------WN--------- 1312

Query: 200  KSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPA 258
                   + LP   G + SL  L L +  L +  +PS I  +  L +L L +N F   P 
Sbjct: 1313 -----QIVSLPDGIGQMSSLKDLSLHENQLSD--VPSGISKMPQLADLKLGKNKFTKFPE 1365

Query: 259  SISGLLNLEELELEDCKRLQSLP 281
            +++ + NL  L+L +  ++ S+P
Sbjct: 1366 AVTLIKNLRILDLSE-NQITSIP 1387



 Score = 43.9 bits (102), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 36/231 (15%)

Query: 38   CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIE 96
             KN  ++P  I+ L   R+ +++   +LK F +       L +L +DG    A V + ++
Sbjct: 1110 SKNHKNIP-KITKLDLGRSYKINTIQELKFFTK-------LEELEIDGPVKDASVLAELK 1161

Query: 97   LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
             L  +EL   N  K+LV L +S  GL+ ++  ++ G     +  + L + ++  EL +  
Sbjct: 1162 NLKKIELSEWN-VKDLVVL-NSCTGLEEVELRDIQGFESDFDCSELLSESKAKIELYLDS 1219

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVC 216
            T   R  +++   K+L SL    CN           +P                S+  + 
Sbjct: 1220 TKFERFPTAVSTFKSLTSLSMRDCN--------FTEIP---------------ESIGNLK 1256

Query: 217  SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
             LT L+L    L  +A+P+ I  L  L  LYL+ N F   P ++  L NL+
Sbjct: 1257 RLTDLNLGKNKL--SALPAGIGKLEQLIHLYLDSNQFSIFPDAVLSLKNLQ 1305


>gi|280967725|gb|ACZ98531.1| ARGH17 [Malus x domestica]
          Length = 1056

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 144/321 (44%), Gaps = 47/321 (14%)

Query: 77  DLSKLY--LDGTSIAEVPSSIEL-LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           DL++ Y  +     ++VP+  EL L G E L    C+ L  LP      KS++TL L+ C
Sbjct: 631 DLTRSYSLIKSPDFSQVPNLEELILEGCESL---GCRMLTSLPRDFYKSKSVETLCLNDC 687

Query: 134 CKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL 193
            +   V + LG++ SL  L+   TAIR+  +SI  +KNL  L                  
Sbjct: 688 SEFREVHEDLGEMISLRILEADFTAIRQIPTSIVRLKNLTRLSLIN-------------- 733

Query: 194 PFNLLGKSSCPV-ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNN 252
           P    G S   V  + LP+     SL +L LS C L + AI  ++ +L SL+ L L  N 
Sbjct: 734 PIFRRGSSLIGVEGIHLPN-----SLRELSLSVCKLDDDAI-KNLGSLISLQYLDLGWNK 787

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTL--FGALKLCRS 310
           F TLP S+SGL  LE L+L  C  L ++P +  NL+ +  + C +L T+  F  +   R 
Sbjct: 788 FHTLP-SLSGLSKLETLQLSGCMYLHTIPDLLTNLKVLHVDECPALETMPNFSEMSNIRQ 846

Query: 311 -------KYTIINCIDS-------LKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPG 356
                  K T +  +D        + +     L     +  L+       G    I   G
Sbjct: 847 LHVSHSPKLTEVPSLDKSLNSMIWIDMHECTNLTADFRKNILQGWTSCGFG---GIALHG 903

Query: 357 SQIPKWFMYQNEGSSITVTRP 377
           + +P WF + NEG+ ++   P
Sbjct: 904 NYVPDWFEFVNEGAKVSFDIP 924



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 27/222 (12%)

Query: 16  SITEVPSSIEL-LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
             ++VP+  EL L G E L   GC+ L+SLP      K + TL L+ CS+ ++  + +  
Sbjct: 643 DFSQVPNLEELILEGCESL---GCRMLTSLPRDFYKSKSVETLCLNDCSEFREVHEDLGE 699

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK------SLKTL 128
           M  L  L  D T+I ++P+SI  L  L  L L     + R  SS+ G++      SL+ L
Sbjct: 700 MISLRILEADFTAIRQIPTSIVRLKNLTRLSL--INPIFRRGSSLIGVEGIHLPNSLREL 757

Query: 129 NLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASAS 188
           +LS C   ++    LG + SL+ LD+          S+  +  L +L  SGC        
Sbjct: 758 SLSVCKLDDDAIKNLGSLISLQYLDLGWNKF-HTLPSLSGLSKLETLQLSGC-------- 808

Query: 189 WHLH-LP-----FNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
            +LH +P       +L    CP    +P+ + + ++ +L +S
Sbjct: 809 MYLHTIPDLLTNLKVLHVDECPALETMPNFSEMSNIRQLHVS 850



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 8/128 (6%)

Query: 690 GCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
           GC+ L  LPR     K + TL L+  S+FRE  E       L  +  + TAIR +P SI 
Sbjct: 662 GCRMLTSLPRDFYKSKSVETLCLNDCSEFREVHEDLGEMISLRILEADFTAIRQIPTSIV 721

Query: 750 LLSGNILSNLKDCKNLKSLPSTINGLR------SLRMMYPSGCSKLKNVTETLGKVESLE 803
            L    L+ L     +    S++ G+       SLR +  S C    +  + LG + SL+
Sbjct: 722 RLKN--LTRLSLINPIFRRGSSLIGVEGIHLPNSLRELSLSVCKLDDDAIKNLGSLISLQ 779

Query: 804 VRLSSWNR 811
                WN+
Sbjct: 780 YLDLGWNK 787


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 308 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 353


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 308 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 353


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 32/277 (11%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
            +T +P  IE L  L++L L G   L++LP  +  L+ L  L+L G ++L   P+ +  +
Sbjct: 67  QLTTLPKEIENLQNLKILGL-GSNQLTTLPKEVGKLQNLEELDL-GQNQLTTLPEEIGKL 124

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
           ++L KL L+   +  +P  I  L  L+ LYL + +    LP +I  L+ L+ L+L G  +
Sbjct: 125 QNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQ-FATLPKAIGKLQKLQELDL-GINQ 182

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
           L  +P  + K++ L+ELD+    I + T+    + NL+ L               L+L  
Sbjct: 183 LTTLPKEIEKLQKLQELDL---GINQLTTLPKEIGNLQKLQT-------------LNLNH 226

Query: 196 NLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
           N L          LP   G +  L  L+L+   L    +P +I NL +L++LYL  N   
Sbjct: 227 NQLTN--------LPKEIGKLQKLQTLNLNHNQL--TTLPKEIGNLQNLQQLYLYSNQLT 276

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           TLP  I  L  L+EL L D  +L S+P+   NLQ ++
Sbjct: 277 TLPKEIEKLQKLQELHLSD-NQLTSVPEEIGNLQNLQ 312



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 25/291 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +L L    +T +P  I  L  L+ L L   + L++LP  I  L+ L+TL L+
Sbjct: 190 IEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQ-LTNLPKEIGKLQKLQTLNLN 248

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ + ++++L +LYL    +  +P  IE L  L+ L+L++ + L  +P  I 
Sbjct: 249 -HNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQ-LTSVPEEIG 306

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L    +L  +P  +G ++ LEELD+    +      I  ++ L++L   G 
Sbjct: 307 NLQNLQKLSLH-SNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDL-GN 364

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVAL--------MLPSLTGVCSLTK-LDLSDCGLGEA 231
           N+  A       LP  + GK   P  L         LP   G     K L L+   L  A
Sbjct: 365 NKLTA-------LPKEI-GKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNL--A 414

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            IP +I +L SL+ L LN N   TLP  I  L NL+ L L D  +L +LP+
Sbjct: 415 TIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNL-DKNQLTTLPK 464



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 29/273 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  L L+   +T +P  I  L  L+ L L   + L++LP  I  L+ L+ L LS
Sbjct: 236 IGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQ-LTTLPKEIEKLQKLQELHLS 294

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ + ++++L KL L    +  +P  I  L  LE L L + + L  LP  I 
Sbjct: 295 D-NQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQ-LTILPKEIG 352

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+TL+L G  KL  +P  +GK+++ + L ++   +      I  ++ L+ LY +  
Sbjct: 353 NLQKLQTLDL-GNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHN 411

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
           N                       +A +   +  + SL  L L+   L    +P +I NL
Sbjct: 412 N-----------------------LATIPQEIGSLQSLQVLTLNSNRL--TTLPKEIGNL 446

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +L+ L L++N   TLP  I  L NLE L+L +
Sbjct: 447 QNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSE 479



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 52/197 (26%)

Query: 107 NECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI 166
           N    L  LP  I  L++LK L L G  +L  +P  +GK+++LEELD+    +      I
Sbjct: 63  NSNNQLTTLPKEIENLQNLKILGL-GSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEI 121

Query: 167 FLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDC 226
             ++NL+                                              KL+L+  
Sbjct: 122 GKLQNLQ----------------------------------------------KLNLNQN 135

Query: 227 GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN 286
            L    +P +I NL  L+ELYL  N F TLP +I  L  L+EL+L    +L +LP+    
Sbjct: 136 QL--TTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDL-GINQLTTLPKEIEK 192

Query: 287 LQFVRA--NGCSSLVTL 301
           LQ ++    G + L TL
Sbjct: 193 LQKLQELDLGINQLTTL 209



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 25/180 (13%)

Query: 641 PQEPGNCSRLWE---EADEFPDIVQVLSDGTDIRELSLAI----------ELLFGLVQLT 687
           P+E GN  +L E     ++F  + + +     ++EL L I          E L  L +L 
Sbjct: 141 PKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELD 200

Query: 688 LNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPAS 747
           L G   L  LP+ I  L+ L TLNL+  ++    P+      +L  ++L    +  LP  
Sbjct: 201 L-GINQLTTLPKEIGNLQKLQTLNLNH-NQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKE 258

Query: 748 IELLSGNILSNLKD----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           I    GN L NL+        L +LP  I  L+ L+ ++ S  ++L +V E +G +++L+
Sbjct: 259 I----GN-LQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSD-NQLTSVPEEIGNLQNLQ 312



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 25/135 (18%)

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL---------EDCKRLQSLP 281
             +P +I+NL +LK L L  N   TLP  +  L NLEEL+L         E+  +LQ+L 
Sbjct: 69  TTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQ 128

Query: 282 QIPPNLQFVRANGCSSLVTLFGALKLCRSKY-------TIINCIDSLKLLRKNGLAISML 334
           ++      +  N  ++L    G L+  +  Y       T+   I  L+ L++  L I+ L
Sbjct: 129 KL-----NLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQL 183

Query: 335 ----REYLELQAVSD 345
               +E  +LQ + +
Sbjct: 184 TTLPKEIEKLQKLQE 198


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 20/315 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  L+L+   +  +P  I  L  LE L L   + L  LP  I +L+ L+ L + 
Sbjct: 126 IGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQ-LRILPKEIGTLQHLQDLNVF 184

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ + ++++L  L L+   +  +P  I  L  LE LYL   + L  LP  I 
Sbjct: 185 N-NQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQ-LATLPKEIG 242

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL---YF 177
            L+ L+ L L+   +L+++P  +GK+++L+EL +    +      I  + NL+ L   Y 
Sbjct: 243 KLQKLEWLGLTNN-QLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYN 301

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSD 236
                P    + H  LP+  L  +       LP   G +  L  L+L +  L  A +P +
Sbjct: 302 RFTTLPQEIGTLH-RLPWLNLEHNQLTT---LPQEIGRLERLEWLNLYNNRL--ATLPKE 355

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-----VR 291
           I  L  L+ LYL  N   TLP  I  L NL++L+LE   +L +LP+    LQ      ++
Sbjct: 356 IGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLE-YNQLATLPEAIGTLQRLEWLSLK 414

Query: 292 ANGCSSLVTLFGALK 306
            N  ++L    G L+
Sbjct: 415 NNQLTTLPEEIGTLQ 429



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 138/304 (45%), Gaps = 33/304 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L  L L+   +  +P  I  L  LE L L   + L++LP  I  L+ L  L L+
Sbjct: 195 IGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQ-LATLPKEIGKLQKLEWLGLT 253

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  PQ +  +++L +L L+   +   P  I  LP L+ L+L E      LP  I 
Sbjct: 254 N-NQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHL-EYNRFTTLPQEIG 311

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L  L  LNL    +L  +P  +G++E LE L++    +      I  ++ L+ LY +  
Sbjct: 312 TLHRLPWLNLEHN-QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANN 370

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVAL-----------------MLPSLTGVC 216
                P           L L +N L  ++ P A+                  LP   G  
Sbjct: 371 QLATLPKEIGQLQNLKDLDLEYNQL--ATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTL 428

Query: 217 S-LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             + KL+L++  L    +P  I  L SLK+L L+ N F T P  I GL +L+ L+L++  
Sbjct: 429 QKIVKLNLANNQL--RTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQMLKLKNIP 486

Query: 276 RLQS 279
            L S
Sbjct: 487 ALLS 490



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 14/233 (6%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R L+L   ++L  FP+ + ++++L  L L    +  +P  IE L  L+ LYL+E + L 
Sbjct: 40  VRNLDLVN-NQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQ-LK 97

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            LP  I  L++L+ L+L    +L  +P  +GK+ SL+ L +    +      I  +++L 
Sbjct: 98  TLPKEIGTLQNLEVLDLYK-NQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLE 156

Query: 174 SLYFSGCNEP--PASASWHLHLP-FNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLG 229
            L  +       P       HL   N+         + LP   G   +L  L+L +  L 
Sbjct: 157 ELNLANNQLRILPKEIGTLQHLQDLNVFNNQ----LITLPQEIGTLQNLQSLNLENNRL- 211

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
              +P +I  L  L+ LYL  N   TLP  I  L  LE L L +  +L+SLPQ
Sbjct: 212 -VTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTN-NQLKSLPQ 262


>gi|15238808|ref|NP_197338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005162|gb|AED92545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 164/393 (41%), Gaps = 82/393 (20%)

Query: 15   TSITEVPSSI-------EL-----------------LTGLELLTLKGCKNLSSLPVTI-- 48
            TS+ E+PSSI       EL                  T LE L L  C NL  LP  +  
Sbjct: 720  TSLLEIPSSIRGTTNLKELDLGGCASLVKLSSCICNATSLEELNLSACSNLVELPCALPG 779

Query: 49   -SSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             S+++ L  L L+G S+LK FP+I  ++++L+   L GT+I EVPSSI L   L+ L ++
Sbjct: 780  DSNMRSLSKLLLNGSSRLKTFPEISTNIQELN---LSGTAIEEVPSSIRLWSRLDKLDMS 836

Query: 108  ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR------R 161
             CKNL   P   +G   +  LNLS   ++E++P  +  +  L         IR       
Sbjct: 837  RCKNLKMFPPVPDG---ISVLNLSE-TEIEDIPPWVENLSQLRHF----VMIRCKKLDNI 888

Query: 162  PTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL 221
              S I  M+ +  L  +  +E  +  S       N+   S+ P    L S          
Sbjct: 889  SLSRISKMEGVHCLQITRGDEDVSGDS-----IVNIRWYSNFPNQWTLQS---------- 933

Query: 222  DLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
            D+    L E    S +        L+   N F T+P  I  L  L +L    C +L SLP
Sbjct: 934  DMLQICLPELVYTSPV-------SLHFISNEFKTIPDCIKNLSQLHQLSFYRCHKLVSLP 986

Query: 282  QIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ 341
            Q+   L  + A  C SL T+ G+               +  +        ++ +E  EL 
Sbjct: 987  QLSDCLSSLDAENCVSLETIDGSFH-------------NPDIRLNFLNCNNLNQEARELI 1033

Query: 342  AVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITV 374
              S   H L    P  ++P +F+++  G S+T+
Sbjct: 1034 QKSVCKHAL---LPSGEVPAYFIHRAIGDSVTI 1063



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 9/206 (4%)

Query: 48  ISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
           I  LK L+ +EL     LK+ P +  +    S L    TS+ E+PSSI     L+ L L 
Sbjct: 682 IQPLKNLKRMELGDARNLKEIPDLSNATNLESLLLSFCTSLLEIPSSIRGTTNLKELDLG 741

Query: 108 ECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTL---GKVESLEELDVSGTAIRRPTS 164
            C +LV+L S I    SL+ LNLS C  L  +P  L     + SL +L ++G++  +   
Sbjct: 742 GCASLVKLSSCICNATSLEELNLSACSNLVELPCALPGDSNMRSLSKLLLNGSSRLKTFP 801

Query: 165 SIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLS 224
            I    N++ L  SG       +S  L    + L  S C    M P +    S+  L+LS
Sbjct: 802 EI--STNIQELNLSGTAIEEVPSSIRLWSRLDKLDMSRCKNLKMFPPVPDGISV--LNLS 857

Query: 225 DCGLGEAAIPSDIDNLHSLKELYLNR 250
           +  + +  IP  ++NL  L+   + R
Sbjct: 858 ETEIED--IPPWVENLSQLRHFVMIR 881



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 683 LVQLTLNGCKNLERLPRTI---SALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L +L L+ C NL  LP  +   S ++ LS L L+G S+ + FPEI+++   + E++L GT
Sbjct: 759 LEELNLSACSNLVELPCALPGDSNMRSLSKLLLNGSSRLKTFPEISTN---IQELNLSGT 815

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRM 780
           AI  +P+SI L S     ++  CKNLK  P   +G+  L +
Sbjct: 816 AIEEVPSSIRLWSRLDKLDMSRCKNLKMFPPVPDGISVLNL 856


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 308 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 353


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 142/302 (47%), Gaps = 7/302 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L+L    +T +P  IE L  L+ L L   + L++LP  I  L+ L  L L 
Sbjct: 177 IGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQ-LTTLPKEIGKLQKLEALHLE 235

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P  I  L  L+ L+L E   L  LP  I 
Sbjct: 236 N-NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHL-ENNQLTTLPKEIG 293

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P+ + K++ L++L  SG         I+ ++NL++L     
Sbjct: 294 KLQNLQELRLD-YNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSN 352

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           LL  S   +A +   +  + +L  L LSD  L    +P +I  L
Sbjct: 353 QLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQL--TTLPKEIGKL 410

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            +L+ELYL+ N   TLP  I  L +LE L L D   L S P+    LQ ++     ++ T
Sbjct: 411 QNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNP-LTSFPEEIGKLQHLKWLRLENIPT 469

Query: 301 LF 302
           L 
Sbjct: 470 LL 471



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 29/201 (14%)

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP  I  L++L+ L+LS   +L  +P  +GK+++L++L+++   +      I  ++NL+ 
Sbjct: 127 LPKEIGKLQNLRDLDLS-SNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQE 185

Query: 175 LYFSGCN--------EPPASASWHLHLPFNLL-------GKSSCPVAL--------MLPS 211
           L+ +           E   +  W L L  N L       GK     AL         LP 
Sbjct: 186 LHLTDNQLTTLPKEIEKLQNLQW-LGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPK 244

Query: 212 LTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELE 270
             G + +L  L LS+  L    +P +I  L  L+EL+L  N   TLP  I  L NL+EL 
Sbjct: 245 EIGKLQNLQWLGLSNNQL--TTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELR 302

Query: 271 LEDCKRLQSLPQIPPNLQFVR 291
           L D  RL +LP+    LQ ++
Sbjct: 303 L-DYNRLTTLPEEIEKLQKLK 322



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 28/160 (17%)

Query: 139 VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLL 198
           +P  +GK+++L +LD+S   +      I  ++NL+                 L+L  N L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQK----------------LNLTRNRL 170

Query: 199 GKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLP 257
                     LP   G + +L +L L+D  L    +P +I+ L +L+ L LN N   TLP
Sbjct: 171 AN--------LPEEIGKLQNLQELHLTDNQL--TTLPKEIEKLQNLQWLGLNNNQLTTLP 220

Query: 258 ASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
             I  L  LE L LE+  +L +LP+    LQ ++  G S+
Sbjct: 221 KEIGKLQKLEALHLEN-NQLTTLPKEIGKLQNLQWLGLSN 259


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 66  IGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPNEIEQLKNLQVLDL- 123

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 124 GSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 182

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 183 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 240

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 241 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 276

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 277 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 317



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 132/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 50  RVLDLSR-QELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 107

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP+ I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 108 LPNEIEQLKNLQVLDL-GSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 166

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 167 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 223

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 224 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 281

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 282 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 323



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 250 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 308

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 309 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 354


>gi|297790454|ref|XP_002863117.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308941|gb|EFH39376.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 955

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 161/360 (44%), Gaps = 71/360 (19%)

Query: 19  EVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDL 78
           ++PSSI   T LELL L GC +L  LP +I +L  L+ L LS  S L + P  + ++ +L
Sbjct: 566 KLPSSIGNATNLELLDLGGCSSLVELPSSIGNLINLKELHLSSLSSLVELPSSIGNLINL 625

Query: 79  SKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLE 137
            +L L   S + E+P  I     LE+L L++C +LV+LP SI  L+ L+TL L GC KLE
Sbjct: 626 KELDLSSLSCLVELPFWIGNATNLEVLNLDQCSSLVKLPFSIGNLQKLQTLTLRGCSKLE 685

Query: 138 NVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNL 197
           ++P  + K+ SL ELD+         +   L+K            P +  SW        
Sbjct: 686 DLPANI-KLGSLGELDL---------TDCLLLKRF----------PLSIKSW-------- 717

Query: 198 LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE--AAIPSDIDNLHSLKELYLNRNNFVT 255
                                ++L+  D    E     P   D +     L++       
Sbjct: 718 ---------------------SRLNEVDMSYTENLKNFPHAFDIITG---LHMTNTEIQE 753

Query: 256 LPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTII 315
           +P  +     L  L L+ CK+L SLPQIP ++ ++ A  C SL  +      C      I
Sbjct: 754 VPPWVKKFSRLTVLILKGCKKLVSLPQIPDSISYIDAQDCESLERVD-----CSFHNPKI 808

Query: 316 NCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQN-EGSSITV 374
             I S K  + N  A  ++        +  P  + S V PG ++P +F +Q+  G S+T+
Sbjct: 809 WLIFS-KCFKLNQEARDLI--------IQTPTSR-SAVLPGREVPAYFTHQSTTGGSLTI 858



 Score = 40.0 bits (92), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L +L L  C  L+R P +I +   L+ +++S     + FP    + D +  +H+  T
Sbjct: 693 LGSLGELDLTDCLLLKRFPLSIKSWSRLNEVDMSYTENLKNFPH---AFDIITGLHMTNT 749

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            I+ +P  ++  S   +  LK CK L SLP   +   S+  +    C  L+ V
Sbjct: 750 EIQEVPPWVKKFSRLTVLILKGCKKLVSLPQIPD---SISYIDAQDCESLERV 799


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 20/315 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L DL +    +  +P  I  L  L+ L L     L++LP  I  L+ L+ L + 
Sbjct: 172 IGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRL-AYNQLTTLPEEIGRLENLQDLNVF 230

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ + ++++L  L L+   +  +P  I  L  LE LYL   + L  LP  I 
Sbjct: 231 N-NQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQ-LATLPQEIG 288

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL---YF 177
            L+ L+ L L+   +L+++P  +GK+++L+EL +    +      I  + NL+ L   Y 
Sbjct: 289 KLQRLEWLGLTNN-QLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYN 347

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSD 236
                P    + H  LP+  L  +       LP   G +  L  L+L +  L  A +P +
Sbjct: 348 RFTTLPQEIGTLH-RLPWLNLEHNQLTT---LPQEIGRLERLEWLNLYNNRL--ATLPKE 401

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQF-----VR 291
           I  L  L+ LYL  N   TLP  I  L NL++L+LE   +L +LP+    LQ      ++
Sbjct: 402 IGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLE-YNQLATLPEAIGTLQRLEWLSLK 460

Query: 292 ANGCSSLVTLFGALK 306
            N  ++L    G L+
Sbjct: 461 NNQLTTLPEEIGTLQ 475



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 138/304 (45%), Gaps = 33/304 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L  L L+   +  +P  I  L  LE L L   + L++LP  I  L+ L  L L+
Sbjct: 241 IGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQ-LATLPQEIGKLQRLEWLGLT 299

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  PQ +  +++L +L L+   +   P  I  LP L+ L+L E      LP  I 
Sbjct: 300 N-NQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHL-EYNRFTTLPQEIG 357

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L  L  LNL    +L  +P  +G++E LE L++    +      I  ++ L+ LY +  
Sbjct: 358 TLHRLPWLNLE-HNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANN 416

Query: 180 --CNEPPASASWH----LHLPFNLLGKSSCPVAL-----------------MLPSLTGVC 216
                P           L L +N L  ++ P A+                  LP   G  
Sbjct: 417 QLATLPKEIGQLQNLKDLDLEYNQL--ATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTL 474

Query: 217 S-LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             + KL+L++  L    +P  I  L SLK+L L+ N F T P  I GL +L+ L+L++  
Sbjct: 475 QKIVKLNLANNQL--RTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQILKLKNIP 532

Query: 276 RLQS 279
            L S
Sbjct: 533 ALLS 536



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 12/245 (4%)

Query: 41  LSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPG 100
           L+  P  I +L+ L+ L L+  ++LK  P+ + +++ L  LYL    +A +P  I  L  
Sbjct: 50  LTIFPREIGTLQNLKYLSLAN-NQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQR 108

Query: 101 LELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR 160
           LE LYL     L  +P  I  L+ L+ L+L    +L  +P  +G ++ LEEL+++   +R
Sbjct: 109 LERLYLG-GNQLTTIPQEIGALQDLEELSLYN-NQLITLPQEIGTLQDLEELNLANNQLR 166

Query: 161 RPTSSIFLMKNLRSL--YFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCS 217
                I  +++L+ L  + +     P       +L +  L  +       LP   G + +
Sbjct: 167 TLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTT---LPEEIGRLEN 223

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L  L++ +  L    +P +I  L +L+ L L  N  VTLP  I  L  LE L L +  +L
Sbjct: 224 LQDLNVFNNQL--VTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTN-NQL 280

Query: 278 QSLPQ 282
            +LPQ
Sbjct: 281 ATLPQ 285



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 14/233 (6%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R L+L   ++L  FP+ + ++++L  L L    +  +P  IE L  L+ LYL+E + L 
Sbjct: 40  VRNLDLVN-NQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQ-LA 97

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            LP  I  L+ L+ L L G  +L  +P  +G ++ LEEL +    +      I  +++L 
Sbjct: 98  TLPKEIGKLQRLERLYLGG-NQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLE 156

Query: 174 SLYFSG--CNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLG 229
            L  +       P       HL   N+         + LP   G   +L  L L+   L 
Sbjct: 157 ELNLANNQLRTLPKEIGTLQHLQDLNVFNNQ----LITLPQEIGTLQNLKYLRLAYNQL- 211

Query: 230 EAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
              +P +I  L +L++L +  N  VTLP  I  L NL+ L LE+  RL +LP+
Sbjct: 212 -TTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLEN-NRLVTLPK 262


>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 138/273 (50%), Gaps = 18/273 (6%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +LYL    +  +P  +  L+ L+ L L+  + L+SLP  + +L+ L+ L+L+  ++L 
Sbjct: 75  LKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQ-LNSLPEQVRNLRDLQVLDLAN-NQLS 132

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
             P  + ++  L  LYL    ++ +P  +E L  L+ L+L+  + L  LP+ I+ L SL+
Sbjct: 133 SLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQ-LNTLPAKIDNLASLQ 191

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--SGCNEPP 184
           +L L    +  ++P  +  + +L+ L +    +    + I  +  L SL+   S  +  P
Sbjct: 192 SLALDNN-QFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLP 250

Query: 185 ASASWHL----HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
               W+L    HL   L   SS P  +       +  L  LDLS+     +++P++I NL
Sbjct: 251 RQV-WNLSKLRHLGLTLNQLSSLPAEI-----GNLSELQWLDLSNNQF--SSLPAEISNL 302

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            SL+ L L+ N F +LP  IS L +L+ L L D
Sbjct: 303 SSLRWLNLSNNQFSSLPKEISNLSSLQWLNLGD 335



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 92/190 (48%), Gaps = 31/190 (16%)

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L+L EC NL ++PS +    SLK L L+   +L  +P+ + ++ SL+ LD+    +    
Sbjct: 55  LHLCEC-NLTQIPSEVWQFSSLKNLYLTN-NQLRTLPEQVSRLSSLQWLDLENNQLNSLP 112

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
             +   +NLR L               L L  N L  SS P       +  + SL  L L
Sbjct: 113 EQV---RNLRDLQV-------------LDLANNQL--SSLP-----GEIGNLSSLDSLYL 149

Query: 224 SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP-Q 282
            D  L  + +P  ++NL +L+ L+L+ N   TLPA I  L +L+ L L D  +  SLP Q
Sbjct: 150 GDNQL--STLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLASLQSLAL-DNNQFSSLPGQ 206

Query: 283 I--PPNLQFV 290
           +    NLQF+
Sbjct: 207 VWNLRNLQFL 216



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 8/107 (7%)

Query: 220 KLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQS 279
           +L L +C L +  IPS++    SLK LYL  N   TLP  +S L +L+ L+LE+  +L S
Sbjct: 54  RLHLCECNLTQ--IPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLEN-NQLNS 110

Query: 280 LPQIPPNLQFVRA-----NGCSSLVTLFGALKLCRSKYTIINCIDSL 321
           LP+   NL+ ++      N  SSL    G L    S Y   N + +L
Sbjct: 111 LPEQVRNLRDLQVLDLANNQLSSLPGEIGNLSSLDSLYLGDNQLSTL 157


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 139/276 (50%), Gaps = 12/276 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +LYL+   +T +P+ I  L  L+ L L   + L +LP  I  LK L+TL L 
Sbjct: 111 IGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQ-LMTLPKEIGQLKNLQTLYLW 169

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L    L+   +  +P  I  L  L++L LN  + L  LP  I 
Sbjct: 170 N-NQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQ-LTTLPKEIG 227

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+L+ L+L G  +   +P+ +GK+++L+ L +     +     I  +KNL+ L+    
Sbjct: 228 QLKNLQWLDL-GYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDN 286

Query: 181 NEP--PASASWHLHLPFNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L    LG +   +   +P  +  + +L  L+L    L    +P +I
Sbjct: 287 QFKIIPKEIGKLKNLKMLSLGYNQFKI---IPKEIEQLQNLQWLNLDANQL--TTLPKEI 341

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
           + L +L+ELYL+ N F TLP  I  L NL++L L +
Sbjct: 342 EQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYLNN 377



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 11/223 (4%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           +R L+LS   KLK  P  +  +++L +LYL    +  +P  I  L  L +L L   + L 
Sbjct: 48  VRVLDLSE-QKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQ-LT 105

Query: 114 RLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR 173
            LP  I  L++L+ L L+   +L  +P+ +G++++L+ L +    +      I  +KNL+
Sbjct: 106 TLPKEIGRLQNLQELYLN-YNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQ 164

Query: 174 SLYF--SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGE 230
           +LY   +     P       +L    L  +       LP   G + +L  L+L++  L  
Sbjct: 165 TLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTT---LPEEIGKLKNLQVLELNNNQL-- 219

Query: 231 AAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             +P +I  L +L+ L L  N F  LP  I  L NL+ L L D
Sbjct: 220 TTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHD 262



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 16/95 (16%)

Query: 221 LDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELEL--------- 271
           LDLS+  L    +P++I+ L +L+ LYL+ N   TLP  I  L NL  LEL         
Sbjct: 51  LDLSEQKL--KTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTLP 108

Query: 272 EDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
           ++  RLQ+L ++     ++  N  + L    G LK
Sbjct: 109 KEIGRLQNLQEL-----YLNYNQLTILPNEIGQLK 138


>gi|302125465|emb|CBI35552.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 21/208 (10%)

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK- 311
            V++PA IS L NL+ L +  C++LQ +P++PP+++ + A  C+SLV+L    ++   + 
Sbjct: 1   MVSIPADISRLSNLKVLLVRQCEQLQKIPKLPPSIKLLDACDCTSLVSLPTPSRIISPQN 60

Query: 312 YTIINCIDSLKLLRKN--GL---AISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
           + +   +  L+ +  N  GL    ++M  E L  +   + G+  SIV PGS+IPKW  ++
Sbjct: 61  WLVSTWLRPLEFMLWNCSGLYQDHVAMALETLHQELFPEIGY--SIVIPGSRIPKWRWHE 118

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGH 426
           N G+S++ T P +  + N   G A+C VF + +  T        P  E+ C+ +   EG 
Sbjct: 119 NMGASVSATLPPHWLD-NNFSGVALCAVFALEEGETI-----QRPG-EIRCNFE-CREGP 170

Query: 427 YIYFRGKFGH-----VVSDHLWLLFLPR 449
           Y      + H     V +DH+ +++ PR
Sbjct: 171 YFSHSITWTHSGDRVVETDHVCMMYQPR 198


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 125/271 (46%), Gaps = 33/271 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           ++S++ L  LY+   +++E+P  +E L  LE L +K  K L  LP  I S  CL  +   
Sbjct: 78  ISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNK-LKKLPTKIFS--CLNLVNFD 134

Query: 61  GC-SKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
              + L  FP  V  ++ L +LY+ G  + EVPS +  LP LE L +    NL   P  +
Sbjct: 135 ASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYN-NNLSTFPPGV 193

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L+ L+ L + G  +L  VP  +  + +LE+L V    +      +  ++ LR LY   
Sbjct: 194 EKLQKLRELYIYG-NQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHD 252

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLGEAAIPSDID 238
                           N L +        +PS  GVCSL  L+ LS      +  P  ++
Sbjct: 253 ----------------NQLTE--------VPS--GVCSLPNLEKLSVYNNNLSTFPPGVE 286

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
            L  L+ELY++ N    +P+ +  L NLE L
Sbjct: 287 KLQKLRELYIHHNQLTEVPSGVCSLPNLEVL 317



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 30/298 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LY+ G  +TEVPS +  L  LE L++    NLS+ P  +  L+ LR L + 
Sbjct: 147 VEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYN-NNLSTFPPGVEKLQKLRELYIY 205

Query: 61  G----------CS------------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           G          CS             L  FP  V  ++ L +LY+    + EVPS +  L
Sbjct: 206 GNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHDNQLTEVPSGVCSL 265

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L +    NL   P  +  L+ L+ L +    +L  VP  +  + +LE L V    
Sbjct: 266 PNLEKLSVYN-NNLSTFPPGVEKLQKLRELYIHHN-QLTEVPSGVCSLPNLEVLSVGNNP 323

Query: 159 IRRPTSSIFLMKNLRSLYFSGC--NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-V 215
           IR     +  +  +++L    C  +E P        L     G++      M+P   G +
Sbjct: 324 IRCLPDEVTRLTRMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEVGNL 383

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             L  L L +  L    +PS + +LH+L+++ L  N F T P  +  L  +E+L++++
Sbjct: 384 QHLWFLALENNLL--RTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEKLDIKN 439



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 39/284 (13%)

Query: 32  LLTLK-GCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAE 90
           LLTL    + L+S+P  +  +  L  L++S  +KL   P+ +  +++LS+L  DG  +  
Sbjct: 15  LLTLDLSNQGLTSIPEEVFDITDLEFLDVSN-NKLTSIPEAIGRLQNLSRLDADGNMMTS 73

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTL------------NLSGCCKLEN 138
           +P +I  L GL+ LY++   NL  LP  +  L++L+ L             +  C  L N
Sbjct: 74  LPQAISSLQGLKQLYVH-SNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVN 132

Query: 139 ----------VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN---EPPA 185
                      P  + K++ L EL + G  +    S +  + NL  L     N    PP 
Sbjct: 133 FDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPG 192

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLGEAAIPSDIDNLHSLK 244
                      + G     V       +GVCSL  L+ LS      +  P  ++ L  L+
Sbjct: 193 VEKLQKLRELYIYGNQLTEVP------SGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLR 246

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           ELY++ N    +P+ +  L NLE+L + +     +L   PP ++
Sbjct: 247 ELYIHDNQLTEVPSGVCSLPNLEKLSVYN----NNLSTFPPGVE 286



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 30/192 (15%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LY+    +TEVPS +  L  LE+L++ G   +  LP  ++ L  ++TL + 
Sbjct: 285 VEKLQKLRELYIHHNQLTEVPSGVCSLPNLEVLSV-GNNPIRCLPDEVTRLTRMKTLSVP 343

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD---GTSIAEVPSSIELLPGLELLYLNECKNLVR-LP 116
            C +  +FP+ V  ++ L  LY     G     VP  +  L  L  L L    NL+R LP
Sbjct: 344 SC-QFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQHLWFLALE--NNLLRTLP 400

Query: 117 SSINGLKSLKTLNL---------SGCCKLE-------------NVPDTLGKVESLEELDV 154
           S+++ L +L+ + L            C+L               +P  L + + L +LDV
Sbjct: 401 STMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEKLDIKNNNITRIPTALHRADKLRDLDV 460

Query: 155 SGTAIRRPTSSI 166
           SG  +  P   +
Sbjct: 461 SGNPLTYPPQDV 472


>gi|356499338|ref|XP_003518498.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1724

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 135/299 (45%), Gaps = 66/299 (22%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++ +++L  L LD   ++T V  S+  L  L  L+  GC NL +  + +  L  L+ L+L
Sbjct: 647 VSGVENLRQLRLDQCKNLTTVHESVGFLKKLAHLSASGCTNLRNFLLKMF-LPSLKVLDL 705

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           + C  L+ FP I+  M++  K+Y+  T+I E+P SI  L GL  L ++  K L  LPSS+
Sbjct: 706 NLCIMLEHFPDIMKEMKEPLKIYMINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSV 765

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
             L ++    + GC +L+         +S + L    TA  RPT        LR+L+   
Sbjct: 766 FMLPNVVAFKIGGCSQLK---------KSFKSLQSPSTANVRPT--------LRTLH--- 805

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
                                                      + + GL +  + + ++ 
Sbjct: 806 -------------------------------------------IENGGLLDEDLLAILNC 822

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
              L+ L  ++NNFV+LPA I   ++L  L++  C +LQ +P+   NL+ +  NGC  L
Sbjct: 823 FPKLEVLIASKNNFVSLPACIKECVHLTSLDVSACWKLQKIPEC-TNLRILNVNGCKGL 880



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 23/146 (15%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFR----------------------- 719
           L QL L+ CKNL  +  ++  LK L+ L+ SG +  R                       
Sbjct: 653 LRQLRLDQCKNLTTVHESVGFLKKLAHLSASGCTNLRNFLLKMFLPSLKVLDLNLCIMLE 712

Query: 720 EFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLR 779
            FP+I     + L+I++  TAI+ +P SI  L+G +  ++ + K LK LPS++  L ++ 
Sbjct: 713 HFPDIMKEMKEPLKIYMINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSVFMLPNVV 772

Query: 780 MMYPSGCSKLKNVTETLGKVESLEVR 805
                GCS+LK   ++L    +  VR
Sbjct: 773 AFKIGGCSQLKKSFKSLQSPSTANVR 798



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 34/185 (18%)

Query: 655 DEFPDIVQVLSD-------GTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           + FPDI++ + +        T I+E+  +I  L GLV L ++  K L+ LP ++  L  +
Sbjct: 712 EHFPDIMKEMKEPLKIYMINTAIKEMPESIGNLTGLVCLDISNSKELKYLPSSVFMLPNV 771

Query: 708 STLNLSGLSKFR------EFPEITSSRDQLLEIHLEGT--------AIRGLPASIELL-- 751
               + G S+ +      + P   + R  L  +H+E          AI      +E+L  
Sbjct: 772 VAFKIGGCSQLKKSFKSLQSPSTANVRPTLRTLHIENGGLLDEDLLAILNCFPKLEVLIA 831

Query: 752 -SGNILS---NLKDCKNLKSLPST-------INGLRSLRMMYPSGCSKLKNVTETLGKVE 800
              N +S    +K+C +L SL  +       I    +LR++  +GC  L+ ++E    ++
Sbjct: 832 SKNNFVSLPACIKECVHLTSLDVSACWKLQKIPECTNLRILNVNGCKGLEQISELPSAIQ 891

Query: 801 SLEVR 805
            ++ R
Sbjct: 892 KVDAR 896


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLIILPQ 316



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 35/254 (13%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLPQ 282
           L+L +  +L++LP+
Sbjct: 281 LDLRN-NQLKTLPK 293



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 50/225 (22%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +   IE L  L+ L L   + L++LP  I  LK L++L LS
Sbjct: 134 IEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIEQLKNLKSLYLS 192

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++   FP+ +  +++L  L+L+   I  +P+ I  L  L+ LYL++ + L+ LP  I 
Sbjct: 193 E-NQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ-LITLPKEIE 250

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIR---------RPTSSIFL--- 168
            LK+L+TL+LS   +L  +P  +G++E+L+ LD+    ++         +   ++FL   
Sbjct: 251 QLKNLQTLDLS-YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 309

Query: 169 ----------------------------------MKNLRSLYFSG 179
                                             +KNL++LY + 
Sbjct: 310 QLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 135/270 (50%), Gaps = 32/270 (11%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKN-LSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
           D T +TE+P+ I  LT L  L L  C N L+SLP  I  L  L+ L L   ++L   P  
Sbjct: 187 DNTPLTELPAEIGQLTSLRELNL--CNNRLTSLPAEIGQLTSLKRLFLH-RNQLTSLPAE 243

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           +  +  L +L L    +  VP+ I  L  L+ L+L+  + L  LP+ I  L SL  L+L+
Sbjct: 244 IGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQ-LTSLPAEIGQLTSLVKLDLT 302

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHL 191
              KL ++P  +G++ESL EL +SG  +R   + I  + +L +L   G N+         
Sbjct: 303 -TNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSL-TLLDLGNNQ--------- 351

Query: 192 HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRN 251
                    +S P       +  + SL +L+L    L   ++P++I  L SLK L+L+RN
Sbjct: 352 --------LTSMPA-----EIGQLTSLVELNLGGNHL--TSMPAEIGQLASLKRLFLHRN 396

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLP 281
              ++PA I  L +LE L L    +L S+P
Sbjct: 397 QLTSMPAEIGQLTSLEMLHL-GGNQLMSVP 425



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 126/269 (46%), Gaps = 18/269 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L L    +T VP+ I  LT L+ L L   + L+SLP  I  L  L  L+L+
Sbjct: 244 IGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQ-LTSLPAEIGQLTSLVKLDLT 302

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL   P  +  +E L +L L G  +  VP+ I  L  L LL L   + L  +P+ I 
Sbjct: 303 -TNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQ-LTSMPAEIG 360

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL  LNL G   L ++P  +G++ SL+ L +    +    + I  + +L  L+  G 
Sbjct: 361 QLTSLVELNLGGN-HLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGN 419

Query: 181 N--EPPASASWHLHLPFNLLGK---SSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIP 234
                PA A     L   LL +   +S P          +  LT L++   G  +  ++P
Sbjct: 420 QLMSVPAEAGQLTSLKRLLLDRNQLTSVPAE--------IGQLTSLEMLHLGGNQLTSVP 471

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGL 263
           ++I  L SL  L+L  N   +LPA+I  L
Sbjct: 472 AEIGQLTSLWTLHLGGNQLTSLPAAIRDL 500



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 153/343 (44%), Gaps = 46/343 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L +L L G  +T +P+ I  LT L LL L     L+SLP  I  L  L  L+LS
Sbjct: 15  IGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILD-HDELTSLPAEIGQLASLVELDLS 73

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  +  L KL L  T + E PS +E L   EL   N    L  LP+ I 
Sbjct: 74  -YNQLTSLPAEIGQLTSLVKLDLT-TWLEEPPSLLEELDSWELNLGN--NRLTSLPAEIG 129

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L SL  LNL    KL  +P  +G++ SL EL++    +    + I  + +L  L     
Sbjct: 130 QLTSLVELNLE-HNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVELNL--- 185

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                + P+  +   +  + SL +L+L +  L   ++P++I  L
Sbjct: 186 -------------------DDNTPLTELPAEIGQLTSLRELNLCNNRL--TSLPAEIGQL 224

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-----FVRANGC 295
            SLK L+L+RN   +LPA I  L +L EL L    +L S+P     L      F+  N  
Sbjct: 225 TSLKRLFLHRNQLTSLPAEIGQLASLVELNLHR-NQLTSVPAEIGQLTSLKRLFLHRNQL 283

Query: 296 SSLVTLFGA------LKLCRSKYTI----INCIDSLKLLRKNG 328
           +SL    G       L L  +K T     I  ++SL+ LR +G
Sbjct: 284 TSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSG 326



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 88/200 (44%), Gaps = 36/200 (18%)

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCC----------------------KLENVPDTLGKV 146
           C  L  LP+ I  L SLK L L G                        +L ++P  +G++
Sbjct: 5   CNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQL 64

Query: 147 ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASA-----SWHLHLPFNLLGKS 201
            SL ELD+S   +    + I  + +L  L  +   E P S      SW L+L  N L  +
Sbjct: 65  ASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRL--T 122

Query: 202 SCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASIS 261
           S P       +  + SL +L+L    L E  +P++I  L SL EL L  N   +LPA I 
Sbjct: 123 SLPA-----EIGQLTSLVELNLEHNKLTE--LPAEIGQLASLVELNLGNNRLTSLPAEIG 175

Query: 262 GLLNLEELELEDCKRLQSLP 281
            L +L EL L+D   L  LP
Sbjct: 176 QLTSLVELNLDDNTPLTELP 195


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+L 
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDL- 122

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 123 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLQTLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 131/283 (46%), Gaps = 40/283 (14%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPD-------------------TLGK----VESLEE 151
           LP  I  LK+L+ L+L G  +L  +P                    TL K    +++L+ 
Sbjct: 107 LPKEIEQLKNLQVLDL-GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 152 LDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALML 209
           LD+S   +    + I  +KNL+SLY S       P       +L    L  +   +   L
Sbjct: 166 LDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---L 222

Query: 210 PS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEE 268
           P+ +  +  L  L LSD  L    +P +I+ L +L+ L L+ N    LP  +  L NL+ 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQT 280

Query: 269 LELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           L+L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 281 LDLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 308 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 353


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 137/282 (48%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  LYL    +T +P  IE L  L+LL L+  + L++LP  I  LK L+ L+LS
Sbjct: 65  IGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTTLPKEIEQLKNLQVLDLS 123

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  +++L  LYL    +  +   IE L  L+ L L+  + L  LP+ I 
Sbjct: 124 N-NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQ-LTTLPNEIE 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            LK+LK+L LS   +    P  +G++++L+ L ++   I    + I  +K L+ LY S  
Sbjct: 182 QLKNLKSLYLSEN-QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD- 239

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +  + LP                 +  + +L  LDLS   L    +P ++  L
Sbjct: 240 -------NQLITLP---------------KEIEQLKNLKSLDLSYNQL--TILPKEVGQL 275

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +L+ L L  N   TLP  I  L NL+ L L +  +L  LPQ
Sbjct: 276 ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-NQLTILPQ 316



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 38/282 (13%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           R L+LS   +LK  P  +  +++L +LYL    +  +P  IE L  L+LLYL   + L  
Sbjct: 49  RVLDLSR-QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR-LTT 106

Query: 115 LPSSINGLKSLKTLNLSG----------------------CCKLENVPDTLGKVESLEEL 152
           LP  I  LK+L+ L+LS                         +L  +   + ++++L+ L
Sbjct: 107 LPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 153 DVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP--PASASWHLHLPFNLLGKSSCPVALMLP 210
           D+S   +    + I  +KNL+SLY S       P       +L    L  +   +   LP
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI---LP 223

Query: 211 S-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
           + +  +  L  L LSD  L    +P +I+ L +LK L L+ N    LP  +  L NL+ L
Sbjct: 224 NEIAKLKKLQYLYLSDNQL--ITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTL 281

Query: 270 ELEDCKRLQSLP---QIPPNLQ--FVRANGCSSLVTLFGALK 306
           +L +  +L++LP   +   NLQ  F+  N  + L    G LK
Sbjct: 282 DLRN-NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLK 322



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  +  L  L+ L L+  + L +LP  I  LK L+TL LS
Sbjct: 249 IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQ-LKTLPKEIEQLKNLQTLFLS 307

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN 107
             ++L   PQ +  +++L  L L    +  +P+ IE L  L+ LYLN
Sbjct: 308 N-NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLN 353


>gi|255569056|ref|XP_002525497.1| hypothetical protein RCOM_0740960 [Ricinus communis]
 gi|223535176|gb|EEF36855.1| hypothetical protein RCOM_0740960 [Ricinus communis]
          Length = 388

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 3/139 (2%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +++++ L L+ T+I E+P SI  L GL  L LK  + L +L  +I  LK L T++L GCS
Sbjct: 253 VENITYLNLNETAIEELPRSISNLNGLIALNLKDYRRLKNLLESICLLKSLVTIDLFGCS 312

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            + +F  I     D+  LY   T I E+PSSI L   L  L L  CK L  LPS ++ L 
Sbjct: 313 NITRFLDISG---DIRYLYSSETIIEEIPSSIGLFSRLSFLDLMNCKRLKNLPSEVSKLA 369

Query: 124 SLKTLNLSGCCKLENVPDT 142
           SL+ L LSGC  +   P+ 
Sbjct: 370 SLRKLVLSGCSGITKFPEV 388



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 7/166 (4%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           TS+ EVPSS+  L  L    ++   +L S    I  L+ L+TL L G S  +++P+IV  
Sbjct: 197 TSLVEVPSSVRFLDKLIDWNMRYYTSLLSFLGGIK-LRSLKTLNLFGYSNFREYPEIV-- 253

Query: 75  MEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
            E+++ L L+ T+I E+P SI  L GL  L L + + L  L  SI  LKSL T++L GC 
Sbjct: 254 -ENITYLNLNETAIEELPRSISNLNGLIALNLKDYRRLKNLLESICLLKSLVTIDLFGCS 312

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            +    D  G +  L     S T I    SSI L   L  L    C
Sbjct: 313 NITRFLDISGDIRYLYS---SETIIEEIPSSIGLFSRLSFLDLMNC 355



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 7/144 (4%)

Query: 656 EFPDIVQVLS----DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLN 711
           E+P+IV+ ++    + T I EL  +I  L GL+ L L   + L+ L  +I  LK L T++
Sbjct: 248 EYPEIVENITYLNLNETAIEELPRSISNLNGLIALNLKDYRRLKNLLESICLLKSLVTID 307

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           L G S    F +I+     +  ++   T I  +P+SI L S     +L +CK LK+LPS 
Sbjct: 308 LFGCSNITRFLDISG---DIRYLYSSETIIEEIPSSIGLFSRLSFLDLMNCKRLKNLPSE 364

Query: 772 INGLRSLRMMYPSGCSKLKNVTET 795
           ++ L SLR +  SGCS +    E 
Sbjct: 365 VSKLASLRKLVLSGCSGITKFPEV 388



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 43/211 (20%)

Query: 628 YKKWGRQTVRRQSPQEPGNCSRLWEEADEFPDIVQVLSDG---TDIRELSLA-------- 676
           +++   + V ++S +E G  SRLW     + ++ QVL+       ++E++L+        
Sbjct: 124 FQEMAHEIVPQESVRELGKRSRLWS----YDNVYQVLTKNLSLVSLKEINLSNSEHLTTF 179

Query: 677 --IELLFGLVQLTLNGCKNLERLPRTIS-----------------------ALKYLSTLN 711
             +     L ++    C +L  +P ++                         L+ L TLN
Sbjct: 180 PDLSHAKNLERMNFEYCTSLVEVPSSVRFLDKLIDWNMRYYTSLLSFLGGIKLRSLKTLN 239

Query: 712 LSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPST 771
           L G S FRE+PEI    + +  ++L  TAI  LP SI  L+G I  NLKD + LK+L  +
Sbjct: 240 LFGYSNFREYPEIV---ENITYLNLNETAIEELPRSISNLNGLIALNLKDYRRLKNLLES 296

Query: 772 INGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           I  L+SL  +   GCS +    +  G +  L
Sbjct: 297 ICLLKSLVTIDLFGCSNITRFLDISGDIRYL 327



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 35/253 (13%)

Query: 50  SLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNE 108
           SL  L+ + LS    L  FP + +  ++L ++  +  TS+ EVPSS+  L  L    +  
Sbjct: 161 SLVSLKEINLSNSEHLTTFPDL-SHAKNLERMNFEYCTSLVEVPSSVRFLDKLIDWNMRY 219

Query: 109 CKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFL 168
             +L+     I  L+SLKTLNL G       P+    VE++  L+++ TAI     SI  
Sbjct: 220 YTSLLSFLGGIK-LRSLKTLNLFGYSNFREYPEI---VENITYLNLNETAIEELPRSI-- 273

Query: 169 MKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGL 228
             NL  L                 +  NL  K    +  +L S+  + SL  +DL  C  
Sbjct: 274 -SNLNGL-----------------IALNL--KDYRRLKNLLESICLLKSLVTIDLFGC-- 311

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
             + I   +D    ++ LY +      +P+SI     L  L+L +CKRL++LP     L 
Sbjct: 312 --SNITRFLDISGDIRYLYSSETIIEEIPSSIGLFSRLSFLDLMNCKRLKNLPSEVSKLA 369

Query: 289 FVRA---NGCSSL 298
            +R    +GCS +
Sbjct: 370 SLRKLVLSGCSGI 382



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 38/78 (48%)

Query: 647 CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
           CS +    D   DI  + S  T I E+  +I L   L  L L  CK L+ LP  +S L  
Sbjct: 311 CSNITRFLDISGDIRYLYSSETIIEEIPSSIGLFSRLSFLDLMNCKRLKNLPSEVSKLAS 370

Query: 707 LSTLNLSGLSKFREFPEI 724
           L  L LSG S   +FPE+
Sbjct: 371 LRKLVLSGCSGITKFPEV 388


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 6/273 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    I  +P  IE L  L+ L L   + L++LP  I  L+ L+ L L 
Sbjct: 90  IGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQ-LTTLPQEIGQLQKLQWLYLP 148

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  +++L  L L    I  +P  IE L  L+ L L+  + L  LP  I 
Sbjct: 149 K-NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQ-LTTLPQEIG 206

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L++L+LS   +L  +P  +G +++L++L +    +    + I  +KNL++L     
Sbjct: 207 QLQNLQSLDLS-TNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 265

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                S           L   S  + +    +  + +L  LDL    L    +P  I  L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQL--TTLPEGIGQL 323

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            +LK L+LN N   TLP  I  L NL+EL L +
Sbjct: 324 QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNN 356



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 38/214 (17%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN-- 181
            ++TL+LS   + + +P  +GK+++L+EL+++   +      I  +KNLR L  S     
Sbjct: 49  KVRTLDLS-ANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIK 107

Query: 182 ------EPPASASWHLHLPFNLLGKSSCPVAL-----------------MLPSLTG-VCS 217
                 E      W L+LP N L  ++ P  +                  LP   G + +
Sbjct: 108 TIPKEIEKLQKLQW-LYLPKNQL--TTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKN 164

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L  L+LS   +    IP +I+ L  L+ L L+ N   TLP  I  L NL+ L+L    RL
Sbjct: 165 LKSLNLSYNQI--KTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL-STNRL 221

Query: 278 QSLPQIPPNLQ-----FVRANGCSSLVTLFGALK 306
            +LPQ   +LQ     ++ +N  + L    G LK
Sbjct: 222 TTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK 255


>gi|295083321|gb|ADF78114.1| rj2 protein [Glycine max]
          Length = 1052

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 141/346 (40%), Gaps = 76/346 (21%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNL 112
           LR L    C  L + P  V+ + +L +   +   ++  V +SI  L  L++L    CK L
Sbjct: 636 LRILNFDRCEGLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRL 694

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              P     L SL+ LNLS C  LE+ P  LGK+E++ +L +S ++I     S   +  L
Sbjct: 695 RSFPPI--KLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGL 752

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL-------------- 218
           R L               L L  + + K    + LM P LT + +L              
Sbjct: 753 RGLEL-------------LFLSPHTIFKVPSSIVLM-PELTVIRALGLKGWQWLKQEEGE 798

Query: 219 -----------TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
                        L +S C L +     D      +KEL L+ NNF  LP  I     L 
Sbjct: 799 EKTGSIVSSMVEMLTVSSCNLCDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLR 858

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN 327
           +L++  CK L+ +  IPPNL+   A  C SL +                           
Sbjct: 859 KLDVCGCKHLREIRGIPPNLKHFFAINCKSLTS--------------------------- 891

Query: 328 GLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSIT 373
               S +R++L  Q + + G+ +    PG +IP+WF  Q+ G SI+
Sbjct: 892 ----SSIRKFLN-QELHEAGNTV-FCLPGKRIPEWFDQQSRGPSIS 931


>gi|215261582|gb|ACJ64862.1| disease resistance protein RPP1-like protein R8 [Arabidopsis
           thaliana]
          Length = 1207

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 140/303 (46%), Gaps = 67/303 (22%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L +L L D +S+ E+PSSIE LT L+ L L+ C +L  LP   ++ K L  L L
Sbjct: 735 LSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATK-LEELYL 793

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CS L+K P  + +  +L +L L   S + E+P+ IE    L++L L+ C +L+ LP S
Sbjct: 794 ENCSSLEKLPPSINA-NNLQQLSLINCSRVVELPA-IENATNLQVLDLHNCSSLLELPPS 851

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
           I    +LK L++SGC  L  +P ++G + +L+ LD+S                      S
Sbjct: 852 IASATNLKKLDISGCSSLVKLPSSIGDMTNLDVLDLSNC--------------------S 891

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
              E P + +    L  NL G   C      P ++     TK+  +DC            
Sbjct: 892 SLVELPININLKSFLAVNLAG---CSQLKSFPEIS-----TKI-FTDC----------YQ 932

Query: 239 NLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            +  L++L +N                       +C  L SLPQ+P +L ++ A+ C SL
Sbjct: 933 RMSRLRDLRIN-----------------------NCNNLVSLPQLPDSLAYLYADNCKSL 969

Query: 299 VTL 301
             L
Sbjct: 970 ERL 972



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 22/140 (15%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +AS  +L  L + G +S+ ++PSSI  +T L++L L  C +L  LP+ I+ LK    + L
Sbjct: 852 IASATNLKKLDISGCSSLVKLPSSIGDMTNLDVLDLSNCSSLVELPININ-LKSFLAVNL 910

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           +GCS+LK FP+I       +K++ D           + +  L  L +N C NLV LP   
Sbjct: 911 AGCSQLKSFPEIS------TKIFTD---------CYQRMSRLRDLRINNCNNLVSLPQLP 955

Query: 120 NGLKSL-----KTLNLSGCC 134
           + L  L     K+L    CC
Sbjct: 956 DSLAYLYADNCKSLERLDCC 975



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 26/180 (14%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   +  ++  + LS+  D++EL   +     L +L L  C +L  LP +I  L  L
Sbjct: 707 KLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDCSSLVELPSSIEKLTSL 765

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS--------- 757
             L L   S   E P   ++  +L E++LE  +++  LP SI   +   LS         
Sbjct: 766 QRLYLQRCSSLVELPSFGNA-TKLEELYLENCSSLEKLPPSINANNLQQLSLINCSRVVE 824

Query: 758 -------------NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
                        +L +C +L  LP +I    +L+ +  SGCS L  +  ++G + +L+V
Sbjct: 825 LPAIENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSSLVKLPSSIGDMTNLDV 884



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 3/108 (2%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRD-QLLEIHLEGTAI 741
           L +L L  C +LE+LP +I+A   L  L+L   S+  E P I ++ + Q+L++H   +++
Sbjct: 788 LEELYLENCSSLEKLPPSINA-NNLQQLSLINCSRVVELPAIENATNLQVLDLH-NCSSL 845

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKL 789
             LP SI   +     ++  C +L  LPS+I  + +L ++  S CS L
Sbjct: 846 LELPPSIASATNLKKLDISGCSSLVKLPSSIGDMTNLDVLDLSNCSSL 893



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 646 NCSRLWE-EADEFPDIVQVLS--DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NCSR+ E  A E    +QVL   + + + EL  +I     L +L ++GC +L +LP +I 
Sbjct: 818 NCSRVVELPAIENATNLQVLDLHNCSSLLELPPSIASATNLKKLDISGCSSLVKLPSSIG 877

Query: 703 ALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPA-SIELLSG--NILSN 758
            +  L  L+LS  S   E P I  +    L ++L G + ++  P  S ++ +     +S 
Sbjct: 878 DMTNLDVLDLSNCSSLVELP-ININLKSFLAVNLAGCSQLKSFPEISTKIFTDCYQRMSR 936

Query: 759 LKD-----CKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           L+D     C NL SLP   +   SL  +Y   C  L+ +
Sbjct: 937 LRDLRINNCNNLVSLPQLPD---SLAYLYADNCKSLERL 972


>gi|336238977|gb|AEI27415.1| TIR_2 [Helianthus annuus]
          Length = 1055

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 123/284 (43%), Gaps = 39/284 (13%)

Query: 27  LTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGT 86
           L  L++L L+  K+L + P     L CL  L L GC                        
Sbjct: 665 LPNLKILDLRESKSLITTP-DFEGLPCLERLILWGCE----------------------- 700

Query: 87  SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
           S+ E+  SI     L  + L  C  L R P  I+ +K L+TL L GC + +  PD    +
Sbjct: 701 SLEEIHPSIGYHKRLVFVNLTSCTALKRFPPIIH-MKKLETLILDGCRRPQQFPDIQSNM 759

Query: 147 ESLEELDVSGTAIRR-PTSSIFLMKNLRSLYFSGCNE-PPASASWHLHLPFNLLGKSSC- 203
           +SL  LD+S T I   P S      NL S   S C        ++HL      L    C 
Sbjct: 760 DSLVTLDLSRTGIEIIPPSIGRFCTNLVSFNLSDCPRLKRIEGNFHLLKSLKDLNLYGCI 819

Query: 204 ---------PVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFV 254
                     V+L  P       L KL+LS C LG+  I SDI  L +L+ L L+ NNF 
Sbjct: 820 GLQSFHHDGYVSLKRPQFPRF--LRKLNLSWCKLGDGDILSDICELLNLQLLDLSGNNFS 877

Query: 255 TLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSL 298
            LP+ IS L  L+ L L  C RL  LP +P ++  +  +GC SL
Sbjct: 878 RLPSRISQLPCLKYLNLTCCARLAELPDLPSSIALLYVDGCDSL 921



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 36/172 (20%)

Query: 650 LWEEADEFPDIVQVLSDGTDIRELSLAI-----ELLFGLVQLTLNGCKNLE--------- 695
           LWE     P++ ++L    D+RE    I     E L  L +L L GC++LE         
Sbjct: 658 LWEGCKSLPNL-KIL----DLRESKSLITTPDFEGLPCLERLILWGCESLEEIHPSIGYH 712

Query: 696 ---------------RLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTA 740
                          R P  I  +K L TL L G  + ++FP+I S+ D L+ + L  T 
Sbjct: 713 KRLVFVNLTSCTALKRFPPIIH-MKKLETLILDGCRRPQQFPDIQSNMDSLVTLDLSRTG 771

Query: 741 IRGLPASIELLSGNILS-NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
           I  +P SI     N++S NL DC  LK +    + L+SL+ +   GC  L++
Sbjct: 772 IEIIPPSIGRFCTNLVSFNLSDCPRLKRIEGNFHLLKSLKDLNLYGCIGLQS 823


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 13/295 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L   S+T +P  +  L  L+ L L   K L++LP  I  L+ L+ L+LS
Sbjct: 67  IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK-LTTLPKEIGQLRNLQELDLS 125

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             S L   P+ V  +E+L +L L    +A +P  I  L  L+ L LN  K L  LP  I 
Sbjct: 126 FNS-LTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIR 183

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L++L+ L+L    +L  +P  +G++++L+ L++  T +      I  ++NL++L    +
Sbjct: 184 QLRNLQELDLHRN-QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 242

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L   +L ++       LP   G + +L  LDL    L    +P +I
Sbjct: 243 QLTTLPKEIGELQNLEILVLRENRITA---LPKEIGQLQNLQWLDLHQNQL--TTLPKEI 297

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
             L +L+ L L++N   TLP  I  L NL+EL L D  +L +LP+    LQ +R 
Sbjct: 298 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL-DENQLTTLPKEIEQLQNLRV 351



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 6/269 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L +L L+   +T +P  I  L  L+ L L   + L++LP  I  L+ L+TL L 
Sbjct: 159 IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLI 217

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P  I  L  LE+L L E + +  LP  I 
Sbjct: 218 -VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR-ITALPKEIG 275

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L    +L  +P  +G++++L+ LD+    +      I  ++NL+ L     
Sbjct: 276 QLQNLQWLDLHQN-QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 334

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           +L   +  +  +   +  + SL  L L    L  + +P +I  L
Sbjct: 335 QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL--STLPKEIGQL 392

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEEL 269
            +L+ L L  N   TLP  I  L NL+EL
Sbjct: 393 QNLQVLGLISNQLTTLPKEIGQLQNLQEL 421



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 29/174 (16%)

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
           + L  LP  I  L++L+ L+LS    L  +P  +G++E+L+ L+++   +      I  +
Sbjct: 58  QKLTILPKEIGQLRNLQELDLS-FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQL 116

Query: 170 KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGL 228
           +NL+ L  S                FN L          LP   G + +L +LDL    L
Sbjct: 117 RNLQELDLS----------------FNSLT--------TLPKEVGQLENLQRLDLHQNRL 152

Query: 229 GEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             A +P +I  L +L+EL LN N   TLP  I  L NL+EL+L    +L +LP+
Sbjct: 153 --ATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHR-NQLTTLPK 203


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 13/295 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L   S+T +P  +  L  L+ L L   K L++LP  I  L+ L+ L+LS
Sbjct: 90  IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK-LTTLPKEIGQLRNLQELDLS 148

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             S L   P+ V  +E+L +L L    +A +P  I  L  L+ L LN  K L  LP  I 
Sbjct: 149 FNS-LTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIR 206

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L++L+ L+L    +L  +P  +G++++L+ L++  T +      I  ++NL++L    +
Sbjct: 207 QLRNLQELDLHRN-QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 265

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L   +L ++       LP   G + +L  LDL    L    +P +I
Sbjct: 266 QLTTLPKEIGELQNLEILVLRENRITA---LPKEIGQLQNLQWLDLHQNQL--TTLPKEI 320

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
             L +L+ L L++N   TLP  I  L NL+EL L D  +L +LP+    LQ +R 
Sbjct: 321 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL-DENQLTTLPKEIEQLQNLRV 374



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 6/269 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L +L L+   +T +P  I  L  L+ L L   + L++LP  I  L+ L+TL L 
Sbjct: 182 IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLI 240

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P  I  L  LE+L L E + +  LP  I 
Sbjct: 241 -VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR-ITALPKEIG 298

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L    +L  +P  +G++++L+ LD+    +      I  ++NL+ L     
Sbjct: 299 QLQNLQWLDLHQN-QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 357

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           +L   +  +  +   +  + SL  L L    L  + +P +I  L
Sbjct: 358 QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL--STLPKEIGQL 415

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEEL 269
            +L+ L L  N   TLP  I  L NL+EL
Sbjct: 416 QNLQVLGLISNQLTTLPKEIGQLQNLQEL 444



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 52/228 (22%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           RTL+L    KL   P+ +  +++L +L L   S+  +P  I  L  L+ L L+   +L  
Sbjct: 51  RTLDLR-YQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLS-FNSLTT 108

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP  +  L++L+ LNL+   KL  +P  +G++ +L+ELD+S                   
Sbjct: 109 LPKEVGQLENLQRLNLNSQ-KLTTLPKEIGQLRNLQELDLS------------------- 148

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
             F+     P                              + +L +LDL    L  A +P
Sbjct: 149 --FNSLTTLPKEVGQ-------------------------LENLQRLDLHQNRL--ATLP 179

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +I  L +L+EL LN N   TLP  I  L NL+EL+L    +L +LP+
Sbjct: 180 MEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHR-NQLTTLPK 226


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 30/283 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L LD   +T +P  +  L  L+ L L+  + L++LP  I  LK L+TL L 
Sbjct: 205 ILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQ-LTTLPKEIGQLKSLQTLYLL 263

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  + +L KLYL       +P  I  L  L+ LYL     L   P  I 
Sbjct: 264 A-NQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLY-GNQLTAFPKEIE 321

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ LNLS   +L  +P+ +G++++L+ L++S   + +    +  ++NL++L     
Sbjct: 322 QLQNLQILNLS-YNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTL----- 375

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                     LH         +  +      +  + +L KL+ S   L    +P +I  +
Sbjct: 376 ---------DLH---------AIQITTFPKEILQLQNLEKLNWSRTQL--TTLPGEIGQM 415

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELE-DCKRLQSLPQ 282
            +LKEL L +N    LP  I  L NLEEL L  +  +  SLP+
Sbjct: 416 QNLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPK 458



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 16/275 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  LYL G  +T  P  IE L  L++L L     L++LP  I  L+ L+ L LS
Sbjct: 297 IGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNL-SYNRLTTLPEEIGQLQNLQILNLS 355

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L K P+ +  + +L  L L    I   P  I  L  LE L  +  + L  LP  I 
Sbjct: 356 -YNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQ-LTTLPGEIG 413

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT--SSIFLMKNLRSLYFS 178
            +++LK LNL    +L  +P  +G++++LEEL+++  + +  +    I  + NL++L+  
Sbjct: 414 QMQNLKELNLEKN-QLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLD 472

Query: 179 G---CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIP 234
                N P         L    L ++S      LP   G + +L +LDLS   L  ++IP
Sbjct: 473 HNMLANLPKEIGQLS-RLETLTLFRNSLET---LPEEIGQLWNLRELDLSYNPL--SSIP 526

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
            +I  L +L+ L+L +     LP  I  L +LEEL
Sbjct: 527 KEIGQLKNLRILHLRKTPLARLPDEIGELQDLEEL 561



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 10/274 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKN-LSSLPVTISSLKCLRTLEL 59
           +  +K L  LYL    +T +P  I  L  L+ L L  C+N  ++LP  I  L+ L++L L
Sbjct: 251 IGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYL--CENRFTTLPKDIGQLQNLQSLYL 308

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            G ++L  FP+ +  +++L  L L    +  +P  I  L  L++L L+    L +LP  +
Sbjct: 309 YG-NQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLS-YNQLTKLPKEL 366

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF-- 177
             L++LKTL+L    ++   P  + ++++LE+L+ S T +      I  M+NL+ L    
Sbjct: 367 GKLRNLKTLDLHAI-QITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEK 425

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
           +     P       +L    L  +S   + +   +  + +L  L L    L  A +P +I
Sbjct: 426 NQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNML--ANLPKEI 483

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
             L  L+ L L RN+  TLP  I  L NL EL+L
Sbjct: 484 GQLSRLETLTLFRNSLETLPEEIGQLWNLRELDL 517



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 16/249 (6%)

Query: 39  KNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL---DGTSIAEVPSSI 95
           + LS+LP  I  L+ L+TL+L   +KL   P+ +  +++L  L L     T ++E    +
Sbjct: 58  QKLSTLPKEIGELQNLQTLDLFD-NKLTVLPKEILQLQNLQMLGLCCNQLTILSEEIGQL 116

Query: 96  ELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS 155
           + L  L+L           LP  I  L++L+TLNL    +L  +P  + +++ L++LD+ 
Sbjct: 117 QKLRALDL----RANQFATLPKEILQLQNLQTLNLDS-NELTALPKEMRQLQKLQKLDLR 171

Query: 156 GTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTG 214
              +      I  +K+L++LY    N+        L L     L   S  +  +   +  
Sbjct: 172 ENQLTTLPKEIGQLKSLQTLYLRA-NQFATLPKEILQLQNLQALNLDSNELTALPKEMRQ 230

Query: 215 VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
           +  L KLDL +  L    +P +I  L SL+ LYL  N    LP  I  L NL++L L  C
Sbjct: 231 LQKLQKLDLRENQL--TTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYL--C 286

Query: 275 K-RLQSLPQ 282
           + R  +LP+
Sbjct: 287 ENRFTTLPK 295



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 35/247 (14%)

Query: 81  LYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC-KLENV 139
           L L    ++ +P  I  L  L+ L L + K L  LP  I  L++L+ L L  CC +L  +
Sbjct: 53  LNLSFQKLSTLPKEIGELQNLQTLDLFDNK-LTVLPKEILQLQNLQMLGL--CCNQLTIL 109

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLG 199
            + +G+++ L  LD+           I  ++NL++L     NE  A       LP     
Sbjct: 110 SEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDS-NELTA-------LP----- 156

Query: 200 KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPAS 259
                       +  +  L KLDL +  L    +P +I  L SL+ LYL  N F TLP  
Sbjct: 157 ----------KEMRQLQKLQKLDLRENQL--TTLPKEIGQLKSLQTLYLRANQFATLPKE 204

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPPNLQF-----VRANGCSSLVTLFGALKLCRSKYTI 314
           I  L NL+ L L D   L +LP+    LQ      +R N  ++L    G LK  ++ Y +
Sbjct: 205 ILQLQNLQALNL-DSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLL 263

Query: 315 INCIDSL 321
            N +  L
Sbjct: 264 ANQLTIL 270


>gi|218200798|gb|EEC83225.1| hypothetical protein OsI_28511 [Oryza sativa Indica Group]
          Length = 999

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 15/182 (8%)

Query: 1   MASMKDLSDLYLDGTSI-TEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +AS+ +L  L L    + +++PS I  LT L+ L L GC+ L  LP++  +LK L  L+L
Sbjct: 538 IASLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNLSGCQGLVKLPMSFRNLKNLVHLDL 597

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLD--------GTSIAEVPSSIELLPGLELLYLNECKN 111
           SGCS ++ F Q+   +  L  L L         G +    P +I  L  LE L L+    
Sbjct: 598 SGCSGVQDFKQVFGGLTKLQYLNLSKIFGRTRVGDNWDGYPETISTLNDLEYLNLSRNSR 657

Query: 112 LVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA------IRRPTSS 165
           +  LP S+  LK L+TL+LS C  L ++P ++  ++SLE L V G +      +R+  S 
Sbjct: 658 IDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELIDSLEFLIVVGCSDQLKEYLRKSHSR 717

Query: 166 IF 167
           IF
Sbjct: 718 IF 719



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 133/301 (44%), Gaps = 43/301 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K L  L          P SI LL  L+ L L G   +S+L  +IS   CL  L+LS
Sbjct: 442 IGKLKQLRFLIAPNIGDNVFPKSITLLPKLKYLDLHGSFRISALQGSISKHACLIHLDLS 501

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           GCS ++                         P ++  L  L+ L L+ C  L  LP +I 
Sbjct: 502 GCSNIRVIQ----------------------PEALCGLTKLQFLNLSWCSILQILPENIA 539

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSG 179
            L  L+ LNLS C  L  +P  +G +  L+ L++SG   + +   S   +KNL  L  SG
Sbjct: 540 SLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNLSGCQGLVKLPMSFRNLKNLVHLDLSG 599

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           C     S        F  L K      L   +L+ +   T++     G      P  I  
Sbjct: 600 C-----SGVQDFKQVFGGLTK------LQYLNLSKIFGRTRV-----GDNWDGYPETIST 643

Query: 240 LHSLKELYLNRNNFVT-LPASISGLLNLEELELEDCKRLQSLP---QIPPNLQFVRANGC 295
           L+ L+ L L+RN+ +  LP S+  L  L+ L+L  C+ L+SLP   ++  +L+F+   GC
Sbjct: 644 LNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELIDSLEFLIVVGC 703

Query: 296 S 296
           S
Sbjct: 704 S 704



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 14/194 (7%)

Query: 1   MASMKDLSDLYLDGTSITEV-PSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +  +  L  L L   SI ++ P +I  LT L+ L L  C  LS LP  I SL  L+ L L
Sbjct: 514 LCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNL 573

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL-ELLYLNECKNLVR---- 114
           SGC  L K P    ++++L  L L G S   V    ++  GL +L YLN  K   R    
Sbjct: 574 SGCQGLVKLPMSFRNLKNLVHLDLSGCS--GVQDFKQVFGGLTKLQYLNLSKIFGRTRVG 631

Query: 115 -----LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFL 168
                 P +I+ L  L+ LNLS   +++ +P +LG ++ L+ LD+S   ++R    SI L
Sbjct: 632 DNWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIEL 691

Query: 169 MKNLRSLYFSGCNE 182
           + +L  L   GC++
Sbjct: 692 IDSLEFLIVVGCSD 705



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE----- 737
           L  L L+GC+ L +LP +   LK L  L+LSG S  ++F ++     +L  ++L      
Sbjct: 568 LQYLNLSGCQGLVKLPMSFRNLKNLVHLDLSGCSGVQDFKQVFGGLTKLQYLNLSKIFGR 627

Query: 738 ---GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
              G    G P +I  L+     NL     +  LP ++  L+ L+ +  S C  L+++  
Sbjct: 628 TRVGDNWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPH 687

Query: 795 TLGKVESLE 803
           ++  ++SLE
Sbjct: 688 SIELIDSLE 696



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 9/185 (4%)

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS--GCN 181
           +L+ ++ S C KL    D     + L  LD++  +IR   SSI  +K LR L     G N
Sbjct: 400 TLRAVHTSNCSKLVLQGDEFSFTKFLRVLDLTDCSIRILPSSIGKLKQLRFLIAPNIGDN 459

Query: 182 EPPASASWHLHLPF-NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
             P S +    L + +L G  S  ++ +  S++    L  LDLS C       P  +  L
Sbjct: 460 VFPKSITLLPKLKYLDLHG--SFRISALQGSISKHACLIHLDLSGCSNIRVIQPEALCGL 517

Query: 241 HSLKELYLNRNNFV-TLPASISGLLNLEELELEDCKRLQSLPQIP---PNLQFVRANGCS 296
             L+ L L+  + +  LP +I+ L  L+ L L +C  L  LP        LQ++  +GC 
Sbjct: 518 TKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYLNLSGCQ 577

Query: 297 SLVTL 301
            LV L
Sbjct: 578 GLVKL 582



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL-------S 716
           LS    + +L ++   L  LV L L+GC  ++   +    L  L  LNLS +        
Sbjct: 573 LSGCQGLVKLPMSFRNLKNLVHLDLSGCSGVQDFKQVFGGLTKLQYLNLSKIFGRTRVGD 632

Query: 717 KFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGL 775
            +  +PE  S+ + L  ++L   + I  LP S+  L      +L  C++L+SLP +I  +
Sbjct: 633 NWDGYPETISTLNDLEYLNLSRNSRIDYLPRSLGNLKKLQTLDLSYCRSLRSLPHSIELI 692

Query: 776 RSLRMMYPSGCS 787
            SL  +   GCS
Sbjct: 693 DSLEFLIVVGCS 704



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 31/192 (16%)

Query: 678 ELLFGLVQL---TLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEI 734
           E L GL +L    L+ C  L+ LP  I++L  L  LNLS      + P    S  +L  +
Sbjct: 512 EALCGLTKLQFLNLSWCSILQILPENIASLTELQYLNLSNCFLLSQLPSHIGSLTELQYL 571

Query: 735 HLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE 794
           +L G                       C+ L  LP +   L++L  +  SGCS +++  +
Sbjct: 572 NLSG-----------------------CQGLVKLPMSFRNLKNLVHLDLSGCSGVQDFKQ 608

Query: 795 TLGKVESLE-VRLSS-WNRPKMQNDFDCVEQSAVETVTKLAKAELLRDS--DSWKKNVDK 850
             G +  L+ + LS  + R ++ +++D   ++ + T+  L    L R+S  D   +++  
Sbjct: 609 VFGGLTKLQYLNLSKIFGRTRVGDNWDGYPET-ISTLNDLEYLNLSRNSRIDYLPRSLGN 667

Query: 851 CMKLSTTATSAC 862
             KL T   S C
Sbjct: 668 LKKLQTLDLSYC 679


>gi|6967115|emb|CAB72469.1| disease resistance protein homlog [Arabidopsis thaliana]
          Length = 1199

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 9/186 (4%)

Query: 1   MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           +++  +L +L L D +S+ E+PSSIE LT L+ L L+ C +L  LP   ++ K L  L L
Sbjct: 735 LSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATK-LEELYL 793

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             CS L+K P  + +  +L +L L   S + E+P+ IE    L+ L L  C +L+ LP S
Sbjct: 794 ENCSSLEKLPPSINA-NNLQQLSLINCSRVVELPA-IENATNLQKLDLGNCSSLIELPLS 851

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA--IRRPTSSIFLMKNLRSLY 176
           I    +LK LN+SGC  L  +P ++G + +L+E D+S  +  +  P +    +K L +L 
Sbjct: 852 IGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPIN--INLKFLDTLN 909

Query: 177 FSGCNE 182
            +GC++
Sbjct: 910 LAGCSQ 915



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 21/265 (7%)

Query: 51  LKCLRTLELSGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNEC 109
           L+ L+ ++LS    LK+ P + ++  +L +L L D +S+ E+PSSIE L  L+ LYL  C
Sbjct: 715 LRNLKWMDLSNSEDLKELPNL-STATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRC 773

Query: 110 KNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLM 169
            +LV LPS  N  K L+ L L  C  LE +P ++    +L++L +   +      +I   
Sbjct: 774 SSLVELPSFGNATK-LEELYLENCSSLEKLPPSIN-ANNLQQLSLINCSRVVELPAIENA 831

Query: 170 KNLRSLYFSGCN---EPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSD 225
            NL+ L    C+   E P S     +L    L  S C   + LPS  G + +L + DLS+
Sbjct: 832 TNLQKLDLGNCSSLIELPLSIGTATNL--KELNISGCSSLVKLPSSIGDITNLKEFDLSN 889

Query: 226 CGLGEAAIPSDIDNLHSLKELYL----NRNNFVTLPASI-----SGLLNLEELELEDCKR 276
           C      +P +I NL  L  L L       +F  +   I       +  L +L + +C  
Sbjct: 890 CS-NLVELPINI-NLKFLDTLNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNN 947

Query: 277 LQSLPQIPPNLQFVRANGCSSLVTL 301
           L SLPQ+P +L ++ A+ C SL  L
Sbjct: 948 LVSLPQLPDSLAYLYADNCKSLERL 972



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 40/245 (16%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGT-SIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           SKL+K  +    + +L  + L  +  + E+P+ +     LE L L +C +LV LPSSI  
Sbjct: 703 SKLRKLWEGTKQLRNLKWMDLSNSEDLKELPN-LSTATNLEELKLRDCSSLVELPSSIEK 761

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L SL+ L L  C  L  +P + G    LEE                       LY   C+
Sbjct: 762 LTSLQRLYLQRCSSLVELP-SFGNATKLEE-----------------------LYLENCS 797

Query: 182 E----PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI 237
                PP+  + +L      L   +C   + LP++    +L KLDL +C      +P  I
Sbjct: 798 SLEKLPPSINANNLQ----QLSLINCSRVVELPAIENATNLQKLDLGNCS-SLIELPLSI 852

Query: 238 DNLHSLKELYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA---N 293
               +LKEL ++  ++ V LP+SI  + NL+E +L +C  L  LP I  NL+F+      
Sbjct: 853 GTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELP-ININLKFLDTLNLA 911

Query: 294 GCSSL 298
           GCS L
Sbjct: 912 GCSQL 916



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 22/140 (15%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           + +  +L +L + G +S+ ++PSSI  +T L+   L  C NL  LP+ I+ LK L TL L
Sbjct: 852 IGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELPININ-LKFLDTLNL 910

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
           +GCS+LK FP+I       +K++ D           + +  L  L +N C NLV LP   
Sbjct: 911 AGCSQLKSFPEIS------TKIFTD---------CYQRMSRLRDLRINNCNNLVSLPQLP 955

Query: 120 NGLKSL-----KTLNLSGCC 134
           + L  L     K+L    CC
Sbjct: 956 DSLAYLYADNCKSLERLDCC 975



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 44/173 (25%)

Query: 646 NCSRLWE-EADEFPDIVQVLSDG--TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTIS 702
           NCSR+ E  A E    +Q L  G  + + EL L+I     L +L ++GC +L +LP +I 
Sbjct: 818 NCSRVVELPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIG 877

Query: 703 A-----------------------LKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
                                   LK+L TLNL+G S+ + FPEI++      + +   +
Sbjct: 878 DITNLKEFDLSNCSNLVELPININLKFLDTLNLAGCSQLKSFPEISTK--IFTDCYQRMS 935

Query: 740 AIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
            +R L              + +C NL SLP   +   SL  +Y   C  L+ +
Sbjct: 936 RLRDL-------------RINNCNNLVSLPQLPD---SLAYLYADNCKSLERL 972



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 26/179 (14%)

Query: 649 RLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
           +LWE   +  ++  + LS+  D++EL   +     L +L L  C +L  LP +I  L  L
Sbjct: 707 KLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKLRDCSSLVELPSSIEKLTSL 765

Query: 708 STLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASI-----------------E 749
             L L   S   E P   ++  +L E++LE  +++  LP SI                 E
Sbjct: 766 QRLYLQRCSSLVELPSFGNAT-KLEELYLENCSSLEKLPPSINANNLQQLSLINCSRVVE 824

Query: 750 LLSGNILSNLK-----DCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLE 803
           L +    +NL+     +C +L  LP +I    +L+ +  SGCS L  +  ++G + +L+
Sbjct: 825 LPAIENATNLQKLDLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLK 883


>gi|77696201|gb|ABB00835.1| disease resistance protein [Arabidopsis thaliana]
 gi|77696209|gb|ABB00839.1| disease resistance protein [Arabidopsis thaliana]
          Length = 385

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 163/386 (42%), Gaps = 101/386 (26%)

Query: 7   LSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLK 66
           L +LY+  + + ++    + LT L+ + L   ++L  LP  +S+   L  ++LS C    
Sbjct: 101 LVELYMPSSQLEKLWEGTQRLTHLKKMNLFASRHLKELP-DLSNATNLERMDLSYCE--- 156

Query: 67  KFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLK 126
                               S+ E+PSS   L  LE L +N C NL  +P+ +N L SL+
Sbjct: 157 --------------------SLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-LASLE 195

Query: 127 TLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPAS 186
           T+N+ GC +L N+P       ++ +L VS TA+     SI     L  L  S   +    
Sbjct: 196 TVNMRGCSRLRNIPVM---STNITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGK---- 248

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKEL 246
                     L G +  P+           SL +LDL D         SDI+        
Sbjct: 249 ----------LKGITHLPI-----------SLKQLDLID---------SDIE-------- 270

Query: 247 YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALK 306
                   T+P  I  L  L  L L  C+RL SLP++P +L+F+ A+   SL T+F  L 
Sbjct: 271 --------TIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMADDYESLETVFCPLN 322

Query: 307 LCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
             +++    NC    KL ++   AI           V       + + PG ++P  F +Q
Sbjct: 323 TPKAELNFTNC---FKLGQQAQRAI-----------VQRSLLLGTTLLPGREVPAEFDHQ 368

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAIC 392
            +G+++T+ RP          GF +C
Sbjct: 369 GKGNTLTI-RPG--------TGFVVC 385



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 47/202 (23%)

Query: 656 EFPDIVQVLSDGTDIRELSLA-----IEL------LFGLVQLTLNGCKNLERLPRTISAL 704
           E PD    LS+ T++  + L+     +E+      L  L  L +N C NL+ +P  ++ L
Sbjct: 137 ELPD----LSNATNLERMDLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMN-L 191

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASI------ELLSGNILSN 758
             L T+N+ G S+ R  P ++++  QL   ++  TA+ G+P SI      E LS +    
Sbjct: 192 ASLETVNMRGCSRLRNIPVMSTNITQL---YVSRTAVEGMPPSIRFCSRLERLSISSSGK 248

Query: 759 LKDCKNL--------------KSLPSTINGLRSLRMMYPSGCSKLKNVTE--------TL 796
           LK   +L              +++P  I  L  L ++  SGC +L ++ E          
Sbjct: 249 LKGITHLPISLKQLDLIDSDIETIPECIKSLHLLYILNLSGCRRLASLPELPSSLRFLMA 308

Query: 797 GKVESLEVRLSSWNRPKMQNDF 818
              ESLE      N PK + +F
Sbjct: 309 DDYESLETVFCPLNTPKAELNF 330


>gi|357468591|ref|XP_003604580.1| Disease resistance protein-like protein [Medicago truncatula]
 gi|355505635|gb|AES86777.1| Disease resistance protein-like protein [Medicago truncatula]
          Length = 688

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 89/147 (60%), Gaps = 5/147 (3%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           ++ + +L  L LD  T++ ++  SI  L  L LL+ +GC  L SL V   +L  L TL+L
Sbjct: 302 LSRVPNLGALCLDYCTNLFQIDESIGFLDKLVLLSAQGCTQLESL-VPYINLPSLETLDL 360

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
            GCS+L++FP+++  ME++  ++LD T++ ++P +I  L GL+ L+L  C+ +++LP+ I
Sbjct: 361 RGCSRLERFPEVLGVMENIKDVHLDQTALEQIPFTIGNLVGLQRLFLRGCQGMIQLPNYI 420

Query: 120 NGLKSLKTLNLSGCCKLENVPDTLGKV 146
             L  L+ +   GC    +  D  GKV
Sbjct: 421 --LPKLEIITTYGCRGFRSSKDE-GKV 444



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 4/132 (3%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
           T++ ++  +I  L  LV L+  GC  LE L   I+ L  L TL+L G S+   FPE+   
Sbjct: 317 TNLFQIDESIGFLDKLVLLSAQGCTQLESLVPYIN-LPSLETLDLRGCSRLERFPEVLGV 375

Query: 728 RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
            + + ++HL+ TA+  +P +I  L G     L+ C+ +  LP+ I  L  L ++   GC 
Sbjct: 376 MENIKDVHLDQTALEQIPFTIGNLVGLQRLFLRGCQGMIQLPNYI--LPKLEIITTYGCR 433

Query: 788 KLKNVTETLGKV 799
             ++  +  GKV
Sbjct: 434 GFRSSKDE-GKV 444



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNL 112
           L  L+  GC  L +  + ++ + +L  L LD  T++ ++  SI  L  L LL    C  L
Sbjct: 285 LNFLDFEGCKFLTEI-RSLSRVPNLGALCLDYCTNLFQIDESIGFLDKLVLLSAQGCTQL 343

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             L   IN L SL+TL+L GC +LE  P+ LG +E+++++ +  TA+ +   +I  +  L
Sbjct: 344 ESLVPYIN-LPSLETLDLRGCSRLERFPEVLGVMENIKDVHLDQTALEQIPFTIGNLVGL 402

Query: 173 RSLYFSGC 180
           + L+  GC
Sbjct: 403 QRLFLRGC 410


>gi|271962539|ref|YP_003336735.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270505714|gb|ACZ83992.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 354

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           ++TE+P  +  L  LE L L G + L  LP  +  L  LR L L G + L +FP+ V  +
Sbjct: 34  ALTELPEWVGRLPRLEDLRLDGNR-LRDLP-DLHGLTALRALHLDG-NALTRFPESVLRL 90

Query: 76  EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            +L  L+L G +I E+P  I LL GL  L +     L  +P+ +  L  L +LNL+    
Sbjct: 91  PELRTLFLYGNAIGELPEGIGLLRGLRHLAVG-GNALTSVPAGLWRLTGLASLNLAENSI 149

Query: 136 LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS-LYFSGCNEPPASASW----- 189
            E VP+T+G++  L  LD+   A+ R   +I  + NL   LY S        AS      
Sbjct: 150 TE-VPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLTR 208

Query: 190 --HLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
             +L+L  N L  +  P A     + G+ +L +L L    L E  IP  I  L  L+EL+
Sbjct: 209 LTYLNLTDNRL--TDLPAA-----IGGLTALRELRLYGNRLRE--IPETIGRLRELRELH 259

Query: 248 LNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           L  N    LPAS+  L  L  L+L +   + SLP
Sbjct: 260 LMNNALTCLPASVGDLSGLRLLDLRNNA-ITSLP 292



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%), Gaps = 7/251 (2%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           + +L  L+L G +I E+P  I LL GL  L + G   L+S+P  +  L  L +L L+  S
Sbjct: 90  LPELRTLFLYGNAIGELPEGIGLLRGLRHLAV-GGNALTSVPAGLWRLTGLASLNLAENS 148

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL-ELLYLNECKNLVRLPSSINGL 122
            + + P+ +  + +L  L L   ++  +P +I  L  L + LYL++ +    +P+S+ GL
Sbjct: 149 -ITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNR-FTSVPASLGGL 206

Query: 123 KSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE 182
             L  LNL+   +L ++P  +G + +L EL + G  +R    +I  ++ LR L+      
Sbjct: 207 TRLTYLNLTD-NRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRELRELHLMNNAL 265

Query: 183 PPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHS 242
               AS        LL   +  +  +  SLTG+  LT LDL +  L E  IP  + +L +
Sbjct: 266 TCLPASVGDLSGLRLLDLRNNAITSLPGSLTGLSRLTHLDLRNNRLRE--IPGGLADLPA 323

Query: 243 LKELYLNRNNF 253
           L++L L  N  
Sbjct: 324 LEKLDLRWNKL 334



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 5/134 (3%)

Query: 680 LFGLVQLT-LNGCKN-LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLE 737
           L GL +LT LN   N L  LP  I  L  L  L L G ++ RE PE      +L E+HL 
Sbjct: 203 LGGLTRLTYLNLTDNRLTDLPAAIGGLTALRELRLYG-NRLREIPETIGRLRELRELHLM 261

Query: 738 GTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLG 797
             A+  LPAS+  LSG  L +L++   + SLP ++ GL  L  +     ++L+ +   L 
Sbjct: 262 NNALTCLPASVGDLSGLRLLDLRN-NAITSLPGSLTGLSRLTHLDLRN-NRLREIPGGLA 319

Query: 798 KVESLEVRLSSWNR 811
            + +LE     WN+
Sbjct: 320 DLPALEKLDLRWNK 333


>gi|357452821|ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
 gi|355485735|gb|AES66938.1| Disease-resistance protein [Medicago truncatula]
          Length = 1288

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 96/175 (54%), Gaps = 11/175 (6%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLELSGCSKLKKFPQIVA 73
           T++ +V  SI  LT L  L+L+ C +L +L   I S+L  LR L LSGC+KL+K P    
Sbjct: 754 TNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTKLEKTPDFTG 813

Query: 74  SMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
           +  +L  L +DG TS++ V  SI  +  L  L L +C  L  +P+SIN + SL TL+L G
Sbjct: 814 A-SNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITSLVTLDLRG 872

Query: 133 CCKLENVPDTLGK------VESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           C KL  +P  LG+      +ESL  LDVS   + +   +I  +  L  L   G N
Sbjct: 873 CLKLTTLP--LGQNLSSSHMESLIFLDVSFCNLNKVPDAIGELHCLERLNLQGNN 925



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 133/289 (46%), Gaps = 17/289 (5%)

Query: 6   DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
           +L  L   G   T +PS+ E    +EL       N+  L      L  L+ ++LS    L
Sbjct: 676 NLRYLLWHGYPFTSLPSNFEPYYLVELNMPHS--NIQRLWEGRKDLPYLKRMDLSNSKFL 733

Query: 66  KKFPQIVASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI-NGLK 123
            + P+   +   L +L   G T++ +V  SI  L  L  L L  C +LV L   I + L 
Sbjct: 734 TETPKFFWT-PILERLDFTGCTNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLY 792

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGC-- 180
           SL+ L LSGC KLE  PD  G   +LE LD+ G T++     SI  +  LR L    C  
Sbjct: 793 SLRVLRLSGCTKLEKTPDFTG-ASNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCII 851

Query: 181 --NEPPASASWHLHLPFNLLG---KSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS 235
               P +  +    +  +L G    ++ P+   L S + + SL  LD+S C L +  +P 
Sbjct: 852 LAGIPNSINTITSLVTLDLRGCLKLTTLPLGQNLSS-SHMESLIFLDVSFCNLNK--VPD 908

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIP 284
            I  LH L+ L L  NNF  LP +   L  L  L L  C +L++ P IP
Sbjct: 909 AIGELHCLERLNLQGNNFDALPYTFLNLGRLSYLNLAHCHKLRAFPHIP 957



 Score = 43.5 bits (101), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 3/124 (2%)

Query: 668 TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTI-SALKYLSTLNLSGLSKFREFPEITS 726
           T++ ++  +I  L  LV L+L  C +L  L   I S L  L  L LSG +K  + P+ T 
Sbjct: 754 TNLIQVHPSIGHLTELVFLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTKLEKTPDFTG 813

Query: 727 SRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSG 785
           + + L  + ++G T++  +  SI  ++     +L+DC  L  +P++IN + SL  +   G
Sbjct: 814 ASN-LEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTITSLVTLDLRG 872

Query: 786 CSKL 789
           C KL
Sbjct: 873 CLKL 876


>gi|168014783|ref|XP_001759931.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689061|gb|EDQ75435.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 414

 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 148/300 (49%), Gaps = 23/300 (7%)

Query: 17  ITEVPS-SIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           I ++P+   E+ T LEL  L+GC NL+ LP  + ++  L+TL L GC KL+  P  ++++
Sbjct: 12  IKKIPNLFFEISTILEL-DLEGCSNLTMLPNEVKNMTLLKTLNLKGCEKLRSLPNDLSNL 70

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+ L   G +S+  +P+ +  L  L   Y+ +C +L  LP+ +    SL TLN+    
Sbjct: 71  TSLTILNTWGCSSLTSLPNELSNLTSLTTFYMYKCSSLTSLPNELGNFTSLTTLNIGSYS 130

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
           +L ++P+ LG   SL   D     IR   S I L   L +L +    +     S  L LP
Sbjct: 131 RLTSLPNELGNFTSLITFD-----IRWYKSLISLPNELGNLTYLTTLDITWCESLAL-LP 184

Query: 195 FNLLGKSS--------CPVALMLPSLTGVCS-LTKLDLSDCGLGEAAIPSDIDNLHSLKE 245
             L   +S        C    + P+  G  S LT L +  C     ++P++++NL SL  
Sbjct: 185 NELDNLTSLTTFDISWCSSLTLFPNEFGNLSFLTTLKMRTCS-SLTSLPNELENLTSLTT 243

Query: 246 LYLNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQ---IPPNLQFVRANGCSSLVTL 301
           L +   ++  +LP  +S L +L  L++   K L SLP       +L  +  +GCSSL +L
Sbjct: 244 LNMRWCSSLTSLPNEMSNLTSLTTLDISGFKSLISLPNKLGKLTSLTILNMDGCSSLTSL 303



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 26/276 (9%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+  +P+ +  LT L  L +  C++L+ LP  + +L  L T ++S CS L  FP    ++
Sbjct: 155 SLISLPNELGNLTYLTTLDITWCESLALLPNELDNLTSLTTFDISWCSSLTLFPNEFGNL 214

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+ L +   +S+  +P+ +E L  L  L +  C +L  LP+ ++ L SL TL++SG  
Sbjct: 215 SFLTTLKMRTCSSLTSLPNELENLTSLTTLNMRWCSSLTSLPNEMSNLTSLTTLDISGFK 274

Query: 135 KLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP 194
            L ++P+ LGK+ SL  L++ G +    TS    + N  SL                   
Sbjct: 275 SLISLPNKLGKLTSLTILNMDGCS--SLTSLPNKLGNFTSLIT----------------- 315

Query: 195 FNLLGKSSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNR-NN 252
              L    C     LP+  + + SLT L++        ++ +++DN+ SL    + R ++
Sbjct: 316 ---LSMEECLSLTSLPNEFSNLTSLTILNMWKYS-SLISLLNELDNIESLTTFNIKRCSS 371

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            ++LP  +  L +L  L +  C RL SLP    NL 
Sbjct: 372 LISLPNELGNLTSLTTLNINRCSRLISLPNELKNLT 407



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 1/141 (0%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVAS 74
           +S+T +P+ +E LT L  L ++ C +L+SLP  +S+L  L TL++SG   L   P  +  
Sbjct: 226 SSLTSLPNELENLTSLTTLNMRWCSSLTSLPNEMSNLTSLTTLDISGFKSLISLPNKLGK 285

Query: 75  MEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
           +  L+ L +DG +S+  +P+ +     L  L + EC +L  LP+  + L SL  LN+   
Sbjct: 286 LTSLTILNMDGCSSLTSLPNKLGNFTSLITLSMEECLSLTSLPNEFSNLTSLTILNMWKY 345

Query: 134 CKLENVPDTLGKVESLEELDV 154
             L ++ + L  +ESL   ++
Sbjct: 346 SSLISLLNELDNIESLTTFNI 366



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 2/156 (1%)

Query: 1   MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
           M+++  L+ L + G  S+  +P+ +  LT L +L + GC +L+SLP  + +   L TL +
Sbjct: 259 MSNLTSLTTLDISGFKSLISLPNKLGKLTSLTILNMDGCSSLTSLPNKLGNFTSLITLSM 318

Query: 60  SGCSKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSS 118
             C  L   P   +++  L+ L +   +S+  + + ++ +  L    +  C +L+ LP+ 
Sbjct: 319 EECLSLTSLPNEFSNLTSLTILNMWKYSSLISLLNELDNIESLTTFNIKRCSSLISLPNE 378

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
           +  L SL TLN++ C +L ++P+ L  + SL  L++
Sbjct: 379 LGNLTSLTTLNINRCSRLISLPNELKNLTSLTILNM 414



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 120/263 (45%), Gaps = 23/263 (8%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGLELLYLNECKNL 112
           L  L+L   S +KK P +   +  + +L L+G S +  +P+ ++ +  L+ L L  C+ L
Sbjct: 1   LNVLQLRNYSFIKKIPNLFFEISTILELDLEGCSNLTMLPNEVKNMTLLKTLNLKGCEKL 60

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
             LP+ ++ L SL  LN  GC  L ++P+ L  + SL       T      SS+  + N 
Sbjct: 61  RSLPNDLSNLTSLTILNTWGCSSLTSLPNELSNLTSLT------TFYMYKCSSLTSLPNE 114

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA---------LMLPS-LTGVCSLTKLD 222
              + S       S S    LP N LG  +  +          + LP+ L  +  LT LD
Sbjct: 115 LGNFTSLTTLNIGSYSRLTSLP-NELGNFTSLITFDIRWYKSLISLPNELGNLTYLTTLD 173

Query: 223 LSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTL-PASISGLLNLEELELEDCKRLQSLP 281
           ++ C    A +P+++DNL SL    ++  + +TL P     L  L  L++  C  L SLP
Sbjct: 174 ITWCE-SLALLPNELDNLTSLTTFDISWCSSLTLFPNEFGNLSFLTTLKMRTCSSLTSLP 232

Query: 282 QIPPN---LQFVRANGCSSLVTL 301
               N   L  +    CSSL +L
Sbjct: 233 NELENLTSLTTLNMRWCSSLTSL 255



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 1/121 (0%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           +++L L GC NL  LP  +  +  L TLNL G  K R  P   S+   L  ++  G +++
Sbjct: 25  ILELDLEGCSNLTMLPNEVKNMTLLKTLNLKGCEKLRSLPNDLSNLTSLTILNTWGCSSL 84

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
             LP  +  L+      +  C +L SLP+ +    SL  +     S+L ++   LG   S
Sbjct: 85  TSLPNELSNLTSLTTFYMYKCSSLTSLPNELGNFTSLTTLNIGSYSRLTSLPNELGNFTS 144

Query: 802 L 802
           L
Sbjct: 145 L 145



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 9/167 (5%)

Query: 645 GNCSRLWEEADEFPDIVQVLSDGTDIR----ELSLAIEL--LFGLVQLTLNGCKNLERLP 698
           G+ SRL    +E  +   +++   DIR     +SL  EL  L  L  L +  C++L  LP
Sbjct: 127 GSYSRLTSLPNELGNFTSLITF--DIRWYKSLISLPNELGNLTYLTTLDITWCESLALLP 184

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
             +  L  L+T ++S  S    FP    +   L  + +   +++  LP  +E L+     
Sbjct: 185 NELDNLTSLTTFDISWCSSLTLFPNEFGNLSFLTTLKMRTCSSLTSLPNELENLTSLTTL 244

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEV 804
           N++ C +L SLP+ ++ L SL  +  SG   L ++   LGK+ SL +
Sbjct: 245 NMRWCSSLTSLPNEMSNLTSLTTLDISGFKSLISLPNKLGKLTSLTI 291



 Score = 43.1 bits (100), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 677 IELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHL 736
           +E L  L  L +  C +L  LP  +S L  L+TL++SG       P        L  +++
Sbjct: 235 LENLTSLTTLNMRWCSSLTSLPNEMSNLTSLTTLDISGFKSLISLPNKLGKLTSLTILNM 294

Query: 737 EG-TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTET 795
           +G +++  LP  +   +  I  ++++C +L SLP+  + L SL ++     S L ++   
Sbjct: 295 DGCSSLTSLPNKLGNFTSLITLSMEECLSLTSLPNEFSNLTSLTILNMWKYSSLISLLNE 354

Query: 796 LGKVESL 802
           L  +ESL
Sbjct: 355 LDNIESL 361



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 707 LSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILSNLKDCKNL 765
           L+ L L   S  ++ P +      +LE+ LEG + +  LP  ++ ++     NLK C+ L
Sbjct: 1   LNVLQLRNYSFIKKIPNLFFEISTILELDLEGCSNLTMLPNEVKNMTLLKTLNLKGCEKL 60

Query: 766 KSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           +SLP+ ++ L SL ++   GCS L ++   L  + SL
Sbjct: 61  RSLPNDLSNLTSLTILNTWGCSSLTSLPNELSNLTSL 97


>gi|260788670|ref|XP_002589372.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
 gi|229274549|gb|EEN45383.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
          Length = 445

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 12/296 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + S++ L+ LY+    ++ +P  +E L  L  L + G   L+  P  + SL  L  LE+S
Sbjct: 78  IGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFI-GNNQLTGFPSGVCSLPNLEVLEVS 136

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL  FP +V  ++ L  LY++G  + EVP  + LLP LE+L ++  K L   P  + 
Sbjct: 137 -YNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNK-LSTFPPGVE 194

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ L + G  +L  VP  +  + +LE L V    +      +  ++ +R LY  G 
Sbjct: 195 KLQKLRELYIYG-NQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKVRELYIYG- 252

Query: 181 NEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           N+     S    LP   +L     P+  +   +T +  L  L +  C   E   P  + +
Sbjct: 253 NQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDE--FPRQVLH 310

Query: 240 LHSLKELYLNRN---NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           L +L+ELY  +N    F  +P  +  L +L  L LE    L++LP    +L  +R 
Sbjct: 311 LKTLEELYAGQNGGRKFDMVPDEVGNLQHLWLLSLE-YNLLRTLPSTMSHLHNLRV 365



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 129/295 (43%), Gaps = 70/295 (23%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LY++G  +TEVP  + LL  LE+L++   K LS+ P  +  L+ LR L + 
Sbjct: 147 VEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNK-LSTFPPGVEKLQKLRELYIY 205

Query: 61  G----------CS------------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           G          CS             L  FP  V  ++ + +LY+ G  + EVPS + LL
Sbjct: 206 GNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKVRELYIYGNQLTEVPSGVCLL 265

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE+L +     + RLP+ +  L  LKTL++ GC + +  P  +  +++LEEL      
Sbjct: 266 PNLEVLSVG-MNPIRRLPNDVTRLARLKTLSVPGC-QFDEFPRQVLHLKTLEELYAGQNG 323

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
            R+       + NL+ L             W L L +NLL                    
Sbjct: 324 GRKFDMVPDEVGNLQHL-------------WLLSLEYNLL-------------------- 350

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
                         +PS + +LH+L+ + L  N F T P  +  L  +E+L++ +
Sbjct: 351 ------------RTLPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAMEKLDIRN 393



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 14/264 (5%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L    +T +P  +  +T LE L +   K L+S+P  +  L+ L  L+ +  + L   P
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEFLDVSNNK-LTSIPEAVGRLQKLYRLD-ADYNTLTSLP 75

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           Q + S++ L+ LY+    ++ +P  +E L  L  L++   + L   PS +  L +L+ L 
Sbjct: 76  QAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQ-LTGFPSGVCSLPNLEVLE 134

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG---CNEPPAS 186
           +S   KL N P  + K++ L  L ++G  +      + L+ NL  L  S       PP  
Sbjct: 135 VS-YNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGV 193

Query: 187 ASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLGEAAIPSDIDNLHSLKE 245
                     + G     V       +GVCSL  L+ LS      +  P  ++ L  ++E
Sbjct: 194 EKLQKLRELYIYGNQLTEVP------SGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKVRE 247

Query: 246 LYLNRNNFVTLPASISGLLNLEEL 269
           LY+  N    +P+ +  L NLE L
Sbjct: 248 LYIYGNQLTEVPSGVCLLPNLEVL 271



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 32/193 (16%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ + +LY+ G  +TEVPS + LL  LE+L++ G   +  LP  ++ L  L+TL + 
Sbjct: 239 VEKLQKVRELYIYGNQLTEVPSGVCLLPNLEVLSV-GMNPIRRLPNDVTRLARLKTLSVP 297

Query: 61  GCSKLKKFPQIVASMEDLSKLYLD---GTSIAEVPSSIELLPGLELLYLNECKNLVR-LP 116
           GC +  +FP+ V  ++ L +LY     G     VP  +  L  L LL L    NL+R LP
Sbjct: 298 GC-QFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLWLLSLE--YNLLRTLP 354

Query: 117 SSINGLKSLKTLNLSGCCKLENVPDTL-----------------------GKVESLEELD 153
           S+++ L +L+ + L    K +  P+ L                        + + L +LD
Sbjct: 355 STMSHLHNLRVVQLPNN-KFDTFPEVLCELPAMEKLDIRNNNITRLLTALHRADKLRDLD 413

Query: 154 VSGTAIRRPTSSI 166
           VSG  +  P   +
Sbjct: 414 VSGNPLTYPPQDV 426


>gi|10177584|dbj|BAB10815.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1160

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 219/532 (41%), Gaps = 123/532 (23%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            ++L  L +  + + ++   +  L GL  + L+G +NL  +P  +S    L TL+LS CS 
Sbjct: 610  ENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIP-DLSMATNLETLKLSSCS- 667

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
                                  S+ E+PSSI+ L  L  L ++ C +L  +PS +N LKS
Sbjct: 668  ----------------------SLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVN-LKS 704

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L  LNLSGC +L++  D      ++  LD+  TA      S   ++NL  L    C    
Sbjct: 705  LDRLNLSGCSRLKSFLDI---PTNISWLDIGQTA---DIPSNLRLQNLDELIL--CER-- 754

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                                V L  P +T +  +LT+L  S+       +PS I NL+ L
Sbjct: 755  --------------------VQLRTPLMTMLSPTLTRLTFSN-NPSFVEVPSSIQNLYQL 793

Query: 244  KEL-YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-------------- 288
            + L  +N  N VTLP  I+ L +L  L+L  C +L++ P I  N+               
Sbjct: 794  EHLEIMNCRNLVTLPTGIN-LDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPL 852

Query: 289  ---------FVRANGCSSLVTL---FGALK-LCRSKYTIINCI------------DSLKL 323
                     ++  NGCS+L+ +      LK L R+ ++  +C+            + +KL
Sbjct: 853  SIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFS--DCVELTEASWNGSSSEMVKL 910

Query: 324  LRKNGLAISMLREY----LELQA-VSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
            L  +  +   L       L+L A + +    + ++  G ++P +F ++  G SI++   S
Sbjct: 911  LPADNFSTVKLNFINCFKLDLTALIQNQTFFMQLILTGEEVPSYFTHRTSGDSISLPHIS 970

Query: 379  YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY--IYFRGKF-- 434
                      F  C V  V   ST +  F      E+ C        H+    F G F  
Sbjct: 971  V---CQSFFSFRGCTVIDVDSFSTISVSFDI----EVCCRFIDRFGNHFDSTDFPGYFIT 1023

Query: 435  ----GHVVSDHLWLLFLPRHGH--NWQFESNLIRLSFRSISDPT-WKVKRCG 479
                GH+V    +  F        + QF  + + + FR  +D +  K+K CG
Sbjct: 1024 TKLGGHLVVFDCYFPFNEEFTTFLDGQFNYDHVDIQFRLTNDNSQLKLKGCG 1075



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 46/243 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS---LPVTISSLKCLRTL 57
           +  + DL   Y D   +  +PS + L   L+ L L GC  L S   +P  IS L   +T 
Sbjct: 679 LNKLNDLDMSYCD--HLETIPSGVNL-KSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTA 735

Query: 58  ------------ELSGCSKLK-KFPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLEL 103
                       EL  C +++ + P +      L++L + +  S  EVPSSI+ L  LE 
Sbjct: 736 DIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPSSIQNLYQLEH 795

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L +  C+NLV LP+ IN L SL +L+LS C +L+  PD      ++ +L++S TAI    
Sbjct: 796 LEIMNCRNLVTLPTGIN-LDSLISLDLSHCSQLKTFPDI---STNISDLNLSYTAIEEVP 851

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
            SI  +  L  L  +GC+              NLL  S        P+++ +  L + D 
Sbjct: 852 LSIEKLSLLCYLDMNGCS--------------NLLCVS--------PNISKLKHLERADF 889

Query: 224 SDC 226
           SDC
Sbjct: 890 SDC 892



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            S+     E+  +I+ L+ L  L +  C+NL  LP  I+ L  L +L+LS  S+ + FP+
Sbjct: 774 FSNNPSFVEVPSSIQNLYQLEHLEIMNCRNLVTLPTGIN-LDSLISLDLSHCSQLKTFPD 832

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           I+++   + +++L  TAI  +P SIE LS     ++  C NL  +   I+ L+ L     
Sbjct: 833 ISTN---ISDLNLSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADF 889

Query: 784 SGCSKL 789
           S C +L
Sbjct: 890 SDCVEL 895



 Score = 42.7 bits (99), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 4/124 (3%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TA 740
            LV+L +   K LE+L   + +L  L  ++L G    +E P+++ + + L  + L   ++
Sbjct: 611 NLVKLQMQQSK-LEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATN-LETLKLSSCSS 668

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  LP+SI+ L+     ++  C +L+++PS +N L+SL  +  SGCS+LK+  +    + 
Sbjct: 669 LVELPSSIQYLNKLNDLDMSYCDHLETIPSGVN-LKSLDRLNLSGCSRLKSFLDIPTNIS 727

Query: 801 SLEV 804
            L++
Sbjct: 728 WLDI 731


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 29/275 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A  K+L  L L    +TE+P  I  LT L+ L L   + L  LP  I  L  L  L +S
Sbjct: 80  IARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQ-LEKLPPEIGKLTHLLELRVS 138

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P  +  ++ L  LY+    +  +P  I  L  L+ L+L E   L +LP+SI 
Sbjct: 139 -ANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFL-EHNQLTQLPASIG 196

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L +L++L L+   ++  +P  +G++++L    ++   ++     I  ++NL+ LY  G 
Sbjct: 197 KLNNLQSLILNNN-RVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVG- 254

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                  +    LP               P L  +  L  LDL      E  +P+ I  L
Sbjct: 255 -------NQLQQLP---------------PQLAKLDKLQILDLQKNNFSE--VPAAITKL 290

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
            +L++L+LN N   +L A I  L NL+ L LE+ K
Sbjct: 291 TNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENK 325



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 25/205 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L  L+L+   +T++P+SI  L  L+ L L   + ++ LP  I  LK L T  L+
Sbjct: 172 IGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNR-VNQLPHEIGQLKNLHTFYLA 230

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK+ PQ + ++++L KLYL G  + ++P  +  L  L++L L +  N   +P++I 
Sbjct: 231 N-NRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDL-QKNNFSEVPAAIT 288

Query: 121 GLKSLKTLNLSG---------CCKLEN-------------VPDTLGKVESLEELDVSGTA 158
            L +L+ L L+            KL+N             +P ++G ++SL+ L +S   
Sbjct: 289 KLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTSIGSIQSLKHLSLSDNM 348

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEP 183
           +      I  ++ L++LY      P
Sbjct: 349 LTSLPQEIGQLRKLQALYLRNNQLP 373


>gi|428163352|gb|EKX32427.1| hypothetical protein GUITHDRAFT_121393 [Guillardia theta CCMP2712]
          Length = 1894

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 188/389 (48%), Gaps = 68/389 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLE 58
            A +  L  LYLD   +T VP+++   L  L+ L L   K L+S+P T+ + L  LR+L 
Sbjct: 158 FAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNK-LTSVPETVFNGLASLRSLY 216

Query: 59  LSGCSKLKKFPQIV-ASMEDLSKLYLDGTSIAEVPSSIEL-LPGLELLYLNECKNLVRLP 116
           L   ++L   P+ V A +  L  LYL    +  +P+++   L  L+ LYL+  K L  +P
Sbjct: 217 LDN-NELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLSYNK-LTSVP 274

Query: 117 SSI-NGLKSLKTLNLSGCCKLENVPDTL-GKVESLEELDVSGTAIRRPTSSIFL-MKNLR 173
            ++ +GL SL++L LS   +L +VP+T+   + SL+ L +S   +    +++F  + +L+
Sbjct: 275 ETVFDGLASLRSLYLS-YNELTSVPETVFDGLASLQYLYLSSNKLTSVPATVFAGLTSLQ 333

Query: 174 SLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAI 233
           +LY SG NE                  +S P  +     TG+ SL  L LS   L   ++
Sbjct: 334 TLYLSG-NE-----------------LTSVPETVF----TGLASLQTLYLSSNKL--TSV 369

Query: 234 PSDIDN-LHSLKELYLNRNNFVTLPASI-SGLLNLEELELEDCKRLQSLPQIPPNLQFVR 291
           P  + N L SL+ LYL+ N   ++PA++ +GL +L+ L L D   L S+P          
Sbjct: 370 PETVFNGLASLQTLYLSSNKLTSVPATVFAGLASLQYLYLYD-NELTSIP---------- 418

Query: 292 ANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL- 350
                   T+F  L   +S Y   N + S+     +GLA         LQ +    +KL 
Sbjct: 419 -------ATVFAGLTSLQSLYLSSNKLTSVPETVFDGLA--------SLQTLYLSSNKLT 463

Query: 351 ---SIVFPG-SQIPKWFMYQNEGSSITVT 375
              + VF G + +   ++Y NE +SI  T
Sbjct: 464 SVPATVFNGLASLQTLYLYDNELTSIPAT 492



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 186/383 (48%), Gaps = 68/383 (17%)

Query: 7   LSDLYLDGTSITEVPSSIEL-LTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLELSGCSK 64
           L+++ L G  +T VP+++   L  L+ L L   K L+S+P T+ + L  +R L LSG ++
Sbjct: 92  LTEIRLSGNKLTSVPATVFAGLASLQYLYLSSNK-LTSIPETVFAGLASIRVLILSG-NE 149

Query: 65  LKKFPQIV-ASMEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLPSSI-NG 121
           L   P+ V A +  L  LYLD   +  VP+++   L  L+ LYL+  K L  +P ++ NG
Sbjct: 150 LTSVPETVFAGLASLQYLYLDNNKLTSVPATVFNGLASLQTLYLSSNK-LTSVPETVFNG 208

Query: 122 LKSLKTLNLSGCCKLENVPDTL-GKVESLEELDVSGTAIRRPTSSIFL-MKNLRSLYFSG 179
           L SL++L L    +L +VP+T+   + SL+ L +    +    +++F  + +L++LY S 
Sbjct: 209 LASLRSLYLDN-NELTSVPETVFAGLASLQTLYLYDNELTSIPATVFAGLASLQTLYLS- 266

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDI-D 238
                          +N L  +S P  +      G+ SL  L LS   L   ++P  + D
Sbjct: 267 ---------------YNKL--TSVPETVF----DGLASLRSLYLSYNEL--TSVPETVFD 303

Query: 239 NLHSLKELYLNRNNFVTLPASI-SGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSS 297
            L SL+ LYL+ N   ++PA++ +GL +L+ L L     L S+P+               
Sbjct: 304 GLASLQYLYLSSNKLTSVPATVFAGLTSLQTLYLSG-NELTSVPE--------------- 347

Query: 298 LVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL----SIV 353
             T+F  L   ++ Y   N + S+     NGLA         LQ +    +KL    + V
Sbjct: 348 --TVFTGLASLQTLYLSSNKLTSVPETVFNGLA--------SLQTLYLSSNKLTSVPATV 397

Query: 354 FPG-SQIPKWFMYQNEGSSITVT 375
           F G + +   ++Y NE +SI  T
Sbjct: 398 FAGLASLQYLYLYDNELTSIPAT 420



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 190/395 (48%), Gaps = 56/395 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGL-ELLTLKGCKN-LSSLPVTI-SSLKCLRTL 57
            A +  L  LYL G  +T VP ++   TGL  L TL    N L+S+P T+ + L  L+TL
Sbjct: 326 FAGLTSLQTLYLSGNELTSVPETV--FTGLASLQTLYLSSNKLTSVPETVFNGLASLQTL 383

Query: 58  ELSGCSKLKKFPQIV-ASMEDLSKLYLDGTSIAEVPSSIEL-LPGLELLYLNECKNLVRL 115
            LS  +KL   P  V A +  L  LYL    +  +P+++   L  L+ LYL+  K L  +
Sbjct: 384 YLS-SNKLTSVPATVFAGLASLQYLYLYDNELTSIPATVFAGLTSLQSLYLSSNK-LTSV 441

Query: 116 PSSI-NGLKSLKTLNLSGCCKLENVPDT----LGKVESLEELDVSGTAIRRPTSSIFLMK 170
           P ++ +GL SL+TL LS   KL +VP T    L  +++L   D   T+I  P +    + 
Sbjct: 442 PETVFDGLASLQTLYLS-SNKLTSVPATVFNGLASLQTLYLYDNELTSI--PATGFNGLA 498

Query: 171 NLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE 230
           +L++LY S  NE                  +S P  +      G+ SL  L LS   L  
Sbjct: 499 SLQTLYLS-SNE-----------------LTSIPETVF----AGLASLQTLYLSGNEL-- 534

Query: 231 AAIPSDI-DNLHSLKELYLNRNNFVTLPASI-SGLLNLEELELEDCKRLQSLPQIP---- 284
            ++P  +   L SL+ LYL+ N   ++P ++ +GL +L+ L L     L S+P+      
Sbjct: 535 TSVPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLS-SNELTSIPETVFAGL 593

Query: 285 PNLQ--FVRANGCSSLV-TLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQ 341
            +LQ  ++ +N  +S+  T+F  L   ++ Y   N + S+     NGLA S+   YL   
Sbjct: 594 ASLQYLYLSSNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLA-SLQTLYLSYN 652

Query: 342 AVSDPGHKLSIVFPG-SQIPKWFMYQNEGSSITVT 375
            ++      + VF G + +    +Y N+ +S+  T
Sbjct: 653 KLTSVP---ATVFAGLASLRSLGLYDNKLTSVPAT 684



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 168/343 (48%), Gaps = 45/343 (13%)

Query: 4   MKDLSDLYLDGTSITEVPSS-IELLTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLELSG 61
           +  L  LYL    +T +P++    L  L+ L L     L+S+P T+ + L  L+TL LSG
Sbjct: 473 LASLQTLYLYDNELTSIPATGFNGLASLQTLYLS-SNELTSIPETVFAGLASLQTLYLSG 531

Query: 62  CSKLKKFPQIV-ASMEDLSKLYLDGTSIAEVPSSIEL-LPGLELLYLNECKNLVRLPSSI 119
            ++L   P+ V A +  L  LYL G  +  VP ++   L  L+ LYL+    L  +P ++
Sbjct: 532 -NELTSVPETVFAGLASLQTLYLSGNELTSVPETVFAGLASLQTLYLSS-NELTSIPETV 589

Query: 120 -NGLKSLKTLNLSGCCKLENVPDTL-GKVESLEELDVSGTAIRRPTSSIF-LMKNLRSLY 176
             GL SL+ L LS   KL +VP+T+   + SL+ L +S   +     ++F  + +L++LY
Sbjct: 590 FAGLASLQYLYLS-SNKLTSVPETVFAGLASLQTLYLSYNELTSVPETVFNGLASLQTLY 648

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
            S                +N L  +S P  +      G+ SL  L L D  L   ++P+ 
Sbjct: 649 LS----------------YNKL--TSVPATVF----AGLASLRSLGLYDNKL--TSVPAT 684

Query: 237 I-DNLHSLKELYLNRNNFVTLPASI-SGLLNLEELELEDCKRLQSLPQIPPN----LQFV 290
           +   L SL+ L L+ N   ++P ++ +GL +L+ L L D   L S+P+   N    LQ++
Sbjct: 685 VFAGLASLRSLSLDFNELTSIPETVFAGLTSLQTLYLYD-NELTSVPETVFNGLASLQYL 743

Query: 291 RA--NGCSSLV-TLFGALKLCRSKYTIINCIDSLKLLRKNGLA 330
               N  +S+  T+F  L   ++ Y   N + S+     NGLA
Sbjct: 744 YLDNNKLTSIPETVFAGLASVQTLYLSGNELTSVPETVFNGLA 786



 Score = 43.5 bits (101), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 7/108 (6%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLE 58
            A +  +  LYL G  +T VP ++   L  L+ L +     L+S+P T+   L  L+TL+
Sbjct: 758 FAGLASVQTLYLSGNELTSVPETVFNGLASLQYLNVS-SNELTSVPETVFDGLASLQTLD 816

Query: 59  LSGCSKLKKFPQIV-ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLY 105
           LS  +KL   P+ V A +  L  LYLD   +  VP ++    GL+ L+
Sbjct: 817 LS-YNKLTSVPETVFAGLASLRSLYLDNNELTSVPETV--FAGLDSLW 861



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 10/173 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSI-ELLTGLELLTLKGCKNLSSLPVTI-SSLKCLRTLE 58
            A +  L  LYL    +T VP ++   L  L+ L L   K L+S+P T+ + L  ++TL 
Sbjct: 710 FAGLTSLQTLYLYDNELTSVPETVFNGLASLQYLYLDNNK-LTSIPETVFAGLASVQTLY 768

Query: 59  LSGCSKLKKFPQIVAS-MEDLSKLYLDGTSIAEVPSSI-ELLPGLELLYLNECKNLVRLP 116
           LSG ++L   P+ V + +  L  L +    +  VP ++ + L  L+ L L+  K L  +P
Sbjct: 769 LSG-NELTSVPETVFNGLASLQYLNVSSNELTSVPETVFDGLASLQTLDLSYNK-LTSVP 826

Query: 117 SSI-NGLKSLKTLNLSGCCKLENVPDTL-GKVESLEELDVSGTAIRRPTSSIF 167
            ++  GL SL++L L    +L +VP+T+   ++SL  LD+    +     S+F
Sbjct: 827 ETVFAGLASLRSLYLDN-NELTSVPETVFAGLDSLWRLDLHSNRLASLALSLF 878


>gi|255547478|ref|XP_002514796.1| hypothetical protein RCOM_1077370 [Ricinus communis]
 gi|223545847|gb|EEF47350.1| hypothetical protein RCOM_1077370 [Ricinus communis]
          Length = 968

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 156/349 (44%), Gaps = 38/349 (10%)

Query: 72  VASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
           VA ++D  K   + T +    S+    P L ++    C +LV +  SI  L  L TL L+
Sbjct: 506 VAVLKDFGKECRELTEMPNFSSA----PDLRMIDCVGCISLVEVSPSIGCLNKLHTLILA 561

Query: 132 GCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN--EPPASASW 189
            C ++ +VP     ++S+  L+++   I +      L   +R L  SG    E P+    
Sbjct: 562 YCSRITSVP----SIKSVVLLNLAYCPINKFPQ---LPLTIRVLNLSGTELGEVPSIGFH 614

Query: 190 HLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
              L  NL G   C    +LP S  G+  L  LD + C L  + + S+I  + SL+ L L
Sbjct: 615 SRPLILNLRG---CIKLKILPDSFFGLRDLMSLDCAPC-LNISQLESNISLITSLRFLCL 670

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLC 308
              +  +LP++I  L  LEEL L   +RL+SLP++PP+L  +  + C+SL     +L   
Sbjct: 671 VGTDLESLPSAIQQLSILEELNLCFSRRLRSLPKLPPHLHRLDVSHCTSLQLDSTSLIGI 730

Query: 309 RSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPG------------------HKL 350
           +  +  +   D   L  K   +I M      L     PG                   K 
Sbjct: 731 QGYWGKLFFCDCTSLNHKEIRSILMHAHKRVLLLAHAPGKLYKEFNTSSKNHSVEWKRKF 790

Query: 351 SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVNKVVGFAICCVFQVPK 399
            ++ PG+ IPKW   Q+ G S+T+  P   +  +  +GFA+  VF+  K
Sbjct: 791 VVIIPGNIIPKWISDQSSGYSVTIPLPPNWF--HNFLGFAVGIVFEFGK 837



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 24/183 (13%)

Query: 3   SMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGC 62
           S+  L D   +   +TE+P+       L ++   GC +L  +  +I  L  L TL L+ C
Sbjct: 505 SVAVLKDFGKECRELTEMPN-FSSAPDLRMIDCVGCISLVEVSPSIGCLNKLHTLILAYC 563

Query: 63  SK-------------------LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLEL 103
           S+                   + KFPQ+  ++  L+   L GT + EVP SI       +
Sbjct: 564 SRITSVPSIKSVVLLNLAYCPINKFPQLPLTIRVLN---LSGTELGEVP-SIGFHSRPLI 619

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L L  C  L  LP S  GL+ L +L+ + C  +  +   +  + SL  L + GT +    
Sbjct: 620 LNLRGCIKLKILPDSFFGLRDLMSLDCAPCLNISQLESNISLITSLRFLCLVGTDLESLP 679

Query: 164 SSI 166
           S+I
Sbjct: 680 SAI 682



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L GT + EVPS I   +   +L L+GC  L  LP +   L+ L +L+ + C  + +  
Sbjct: 598 LNLSGTELGEVPS-IGFHSRPLILNLRGCIKLKILPDSFFGLRDLMSLDCAPCLNISQLE 656

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
             ++ +  L  L L GT +  +PS+I+ L  LE L L   + L  LP        L  L+
Sbjct: 657 SNISLITSLRFLCLVGTDLESLPSAIQQLSILEELNLCFSRRLRSLPKLP---PHLHRLD 713

Query: 130 LSGCCKLE 137
           +S C  L+
Sbjct: 714 VSHCTSLQ 721


>gi|15222558|ref|NP_176572.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325006|gb|AAG52448.1|AC010852_5 putative disease resistance protein; 24665-28198 [Arabidopsis
           thaliana]
 gi|332196042|gb|AEE34163.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 200/471 (42%), Gaps = 70/471 (14%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           DG +   VP  ++    L LL  K   +  SLP T +  + L  L +   S+L+   Q  
Sbjct: 569 DGNNRMHVPEEMDFPCLLRLLDWKAYPS-KSLPPTFNP-EHLVELNMHS-SQLEYLWQGT 625

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             +++L K+ L  +   +    +     LE LYL  C++L+ +PSSI+ L  L+ L   G
Sbjct: 626 QPLKNLKKMDLSQSKNLKQLPDLSNATNLEYLYLMGCESLIEIPSSISHLHKLEMLATVG 685

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
           C  LE +P  +  +ESL+ + + G +  R  +   +  N+R L+ +              
Sbjct: 686 CINLEVIPAHMN-LESLQTVYLGGCS--RLRNIPVMSTNIRYLFITNT------------ 730

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL-HSLKELYLNRN 251
               + G   CP             L  LD+S    G       + +L  SL  L L   
Sbjct: 731 ---AVEGVPLCP------------GLKTLDVS----GSRNFKGLLTHLPTSLTTLNLCYT 771

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
           +   +P     L  L+ + L  C+RL SLP++P +L  + A+ C SL T+F  L   ++ 
Sbjct: 772 DIERIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDCESLETVFCPLNTLKAS 831

Query: 312 YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
           ++  NC    KL R+   AI + + +   +A          V PG ++P  F ++ +G S
Sbjct: 832 FSFANC---FKLDREARRAI-IQQSFFMGKA----------VLPGREVPAVFDHRAKGYS 877

Query: 372 ITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFR 431
           +T+ RP    + N    F  C V    + S  T      P   L   +    EG+ +   
Sbjct: 878 LTI-RP----DGNPYTSFVFCVVVSRNQKSDKT-----IPPSLLWRRIIAQDEGYPVEVW 927

Query: 432 GKFGHVV---SDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCG 479
            + G V    ++HL L+F   H    +F++  I   F S S   + +  CG
Sbjct: 928 NRIGDVFKYRTEHL-LIF---HFDFLEFDNRDIVFEFSSESH-DFDIIECG 973



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 64/111 (57%), Gaps = 4/111 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L ++  + LE L +    LK L  ++LS     ++ P+++++ + L  ++L G  ++
Sbjct: 608 LVELNMHSSQ-LEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATN-LEYLYLMGCESL 665

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
             +P+SI  L    +     C NL+ +P+ +N L SL+ +Y  GCS+L+N+
Sbjct: 666 IEIPSSISHLHKLEMLATVGCINLEVIPAHMN-LESLQTVYLGGCSRLRNI 715


>gi|227438257|gb|ACP30618.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1016

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 195/499 (39%), Gaps = 126/499 (25%)

Query: 12   LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQI 71
            +D  +  E+P  +   T L+ L L  C +L  LP    +   ++ L + GCS L +FP  
Sbjct: 598  MDMRNSKELPD-LSTATNLKRLNLSNCSSLIKLPSLPGN--SMKELYIKGCSSLVEFPSF 654

Query: 72   VASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNL 130
            + +  +L  L L    ++ E+PS +E    L+ L L  C NLV LP SI  L+ L  L L
Sbjct: 655  IGNAVNLETLDLSSLPNLLELPSFVENATNLKKLDLRFCSNLVELPFSIGNLQKLWWLEL 714

Query: 131  SGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
             GC KLE +P  +                           NL+SLYF             
Sbjct: 715  QGCSKLEVLPTNI---------------------------NLKSLYF------------- 734

Query: 191  LHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPS-------DI------ 237
                   L  S C +    P ++   +L KLDL    + E   PS       DI      
Sbjct: 735  -------LNLSDCSMLKSFPQIS--TNLEKLDLRGTAI-EQVPPSIRSRPCSDILKMSYF 784

Query: 238  DNL----HSLK---ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFV 290
            +NL    H+L+   EL+L       LP  +  +  L +L ++ C++L S+P +  +++++
Sbjct: 785  ENLKESPHALERITELWLTDTEIQELPPWVKKISRLSQLVVKGCRKLVSVPPLSDSIRYI 844

Query: 291  RANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKL 350
             A+ C SL  +  +     +++  +   +  KL   N  A +++ +  E           
Sbjct: 845  DASDCESLEMIECSFP---NQFVWLKFANCFKL---NQEARNLIIQKSEFA--------- 889

Query: 351  SIVFPGSQIPKWFMYQNEGSSITVTRPSYLYNVN---KVVGFAICCVFQVPKHSTGTYLF 407
              V PG Q+P +F ++  G      +     N N   K + F  C +          Y  
Sbjct: 890  --VLPGGQVPAYFTHRAIGGGPLTIK----LNDNPLPKSMRFKACILLLNKGDHDTCY-- 941

Query: 408  HSYPAHELECSMDGSGEGHYIYFRGKFGHVVSDHLWLLFLPRHGHNWQFE------SNLI 461
                          + E   +  + K+G         L+LP  GH + F       SN +
Sbjct: 942  --------------NEELTQVEVKFKYGSKT------LYLPLAGHLYTFRFGANVSSNEL 981

Query: 462  RLSFRSISDPTWKVKRCGF 480
               F+  +D  WK+  CG 
Sbjct: 982  LFEFKLKNDDVWKIGECGL 1000



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 59/208 (28%)

Query: 641 PQEPGN---------CSRLWEEADEFPDIVQV----LSDGTDIRELSLAIELLFGLVQLT 687
           P  PGN         CS L E      + V +    LS   ++ EL   +E    L +L 
Sbjct: 630 PSLPGNSMKELYIKGCSSLVEFPSFIGNAVNLETLDLSSLPNLLELPSFVENATNLKKLD 689

Query: 688 LNGCKNLERLPRTIS-----------------------ALKYLSTLNLSGLSKFREFPEI 724
           L  C NL  LP +I                         LK L  LNLS  S  + FP+I
Sbjct: 690 LRFCSNLVELPFSIGNLQKLWWLELQGCSKLEVLPTNINLKSLYFLNLSDCSMLKSFPQI 749

Query: 725 TSSRDQLLEIHLEGTAIRGLPASI------ELLSGNILSNLKDCKN-------------- 764
           +++ ++L    L GTAI  +P SI      ++L  +   NLK+  +              
Sbjct: 750 STNLEKL---DLRGTAIEQVPPSIRSRPCSDILKMSYFENLKESPHALERITELWLTDTE 806

Query: 765 LKSLPSTINGLRSLRMMYPSGCSKLKNV 792
           ++ LP  +  +  L  +   GC KL +V
Sbjct: 807 IQELPPWVKKISRLSQLVVKGCRKLVSV 834


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 147/308 (47%), Gaps = 42/308 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +  L+ L+L G  +T +P+ I  L  LE L L G + L+S+P  I  L  LR L L 
Sbjct: 69  IGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGLFLNGNQ-LTSVPAEIWQLTSLRALNLY 127

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDG---TSIA----------------EVPSSIELLPGL 101
           G ++L   P+ +  +  L +L+L G   TSI                  VP+ I  L  L
Sbjct: 128 G-NQLTSVPEEIGQLTSLRRLFLSGNQLTSIGLLSALRGLGVSGNQRTSVPAEIGQLTSL 186

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           E+L L+    L  +P+ I  L SLK LNL G  +L ++P  +G++ SL  L +    +  
Sbjct: 187 EVLELH-YNQLTSVPAEIGQLASLKWLNLHGN-QLTSLPAGIGQLTSLTYLFLDDNRLTS 244

Query: 162 PTSSIFLMKNLRSLYF--SGCNEPPA------SASWHLHLPFNLLGKSSCPVALMLPSLT 213
             + I  + +L  LY   +     PA      S  W L+L  N L  +S P  +      
Sbjct: 245 LPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEW-LYLEGNQL--TSLPAGI-----G 296

Query: 214 GVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
            + SLT L L++  L   ++P++I  L SLK L LN N   ++PA I  L  L EL L +
Sbjct: 297 QLTSLTYLYLNENQL--TSLPAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFE 354

Query: 274 CKRLQSLP 281
             +L S+P
Sbjct: 355 -NQLTSVP 361



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 124/263 (47%), Gaps = 33/263 (12%)

Query: 42  SSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGL 101
            ++P  +  L  L  L L   ++L   P  +  +  L++L+L G  +  +P+ I  L  L
Sbjct: 40  GAVPAEVGQLPSLVKLSLR-HNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSL 98

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           E L+LN    L  +P+ I  L SL+ LNL G  +L +VP+ +G++ SL  L +SG  +  
Sbjct: 99  EGLFLN-GNQLTSVPAEIWQLTSLRALNLYGN-QLTSVPEEIGQLTSLRRLFLSGNQL-- 154

Query: 162 PTSSIFLMKNLRSLYFSGCNEPPASASWH-------LHLPFNLLGKSSCPVALM------ 208
             +SI L+  LR L  SG       A          L L +N L      +  +      
Sbjct: 155 --TSIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWL 212

Query: 209 ---------LPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPA 258
                    LP+  G + SLT L L D  L   ++P++I  L SL+ LYL  N   +LPA
Sbjct: 213 NLHGNQLTSLPAGIGQLTSLTYLFLDDNRL--TSLPAEIGQLTSLERLYLRHNQLTSLPA 270

Query: 259 SISGLLNLEELELEDCKRLQSLP 281
            I  L +LE L LE   +L SLP
Sbjct: 271 EIGQLASLEWLYLEG-NQLTSLP 292



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 29/257 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +  L  L + G   T VP+ I  LT LE+L L     L+S+P  I  L  L+ L L G +
Sbjct: 160 LSALRGLGVSGNQRTSVPAEIGQLTSLEVLELH-YNQLTSVPAEIGQLASLKWLNLHG-N 217

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
           +L   P  +  +  L+ L+LD   +  +P+ I  L  LE LYL   + L  LP+ I  L 
Sbjct: 218 QLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQ-LTSLPAEIGQLA 276

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEP 183
           SL+ L L G  +L ++P  +G++ SL  L ++   +    + I  + +L++L   G N  
Sbjct: 277 SLEWLYLEGN-QLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQLTSLKAL---GLN-- 330

Query: 184 PASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                      +N L  +S P       +  + +L +L L +  L   ++P++I  L  L
Sbjct: 331 -----------YNQL--TSVPA-----EIGQLAALRELGLFENQL--TSVPAEIGQLTLL 370

Query: 244 KELYLNRNNFVTLPASI 260
           + L L  N   + PA+I
Sbjct: 371 EGLELRHNRLTSEPAAI 387


>gi|356560037|ref|XP_003548302.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1083

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 139/344 (40%), Gaps = 79/344 (22%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLELLYLNECKNL 112
           L  L+   C  L + P  V+ + +L +L + D  S+  V  SI  L  L+ L    C+ L
Sbjct: 628 LTVLKFDRCKFLTQIPD-VSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKL 686

Query: 113 VRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNL 172
              P     L SL+TL LS C  LE  P+ LG++E++ EL ++G  I+    S   +  L
Sbjct: 687 TSFPPL--NLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGL 744

Query: 173 RSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSL----TGVCSL---------- 218
           R L  SGC          + LP        C +A+M P L    T  C+           
Sbjct: 745 RLLALSGCGI--------VQLP--------CSLAMM-PELSSFYTDYCNRWQWIELEEGE 787

Query: 219 --------TKLDL---SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLE 267
                   +K  L   ++C L +    +       +  L L+ NNF  LP     L  L 
Sbjct: 788 EKLGSIISSKAQLFCATNCNLCDDFFLAGFKRFAHVGYLNLSGNNFTILPEFFKELQFLR 847

Query: 268 ELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKN 327
            L++ DC+ LQ +  +PP L++  A  C S  +         S   ++N           
Sbjct: 848 TLDVSDCEHLQEIRGLPPILEYFDARNCVSFTS--------SSTSMLLN----------- 888

Query: 328 GLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
                        Q + + G     VFPG++IP+WF  Q+ G S
Sbjct: 889 -------------QELHEAG-GTQFVFPGTRIPEWFDQQSSGPS 918



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 10/140 (7%)

Query: 1   MASMKDLSDL-------YLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKC 53
           +  + D+SDL       + D  S+  V  SI  L  L+ L+  GC+ L+S P    +L  
Sbjct: 639 LTQIPDVSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKLTSFPPL--NLTS 696

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLV 113
           L TL+LS CS L+ FP+I+  ME++ +L L G  I E+P S + L GL LL L+ C  +V
Sbjct: 697 LETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGLRLLALSGC-GIV 755

Query: 114 RLPSSINGLKSLKTLNLSGC 133
           +LP S+  +  L +     C
Sbjct: 756 QLPCSLAMMPELSSFYTDYC 775



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 18/144 (12%)

Query: 656 EFPDIVQVLSDGTDIRELSL-----------AIELLFGLVQLTLNGCKNLERLPRTISAL 704
           + PD+    SD  ++RELS            +I  L  L +L+  GC+ L   P     L
Sbjct: 641 QIPDV----SDLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKLTSFPPL--NL 694

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKN 764
             L TL LS  S    FPEI    + + E+ L G  I+ LP S + L+G  L  L  C  
Sbjct: 695 TSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGLRLLALSGC-G 753

Query: 765 LKSLPSTINGLRSLRMMYPSGCSK 788
           +  LP ++  +  L   Y   C++
Sbjct: 754 IVQLPCSLAMMPELSSFYTDYCNR 777


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 13/295 (4%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L   S+T +P  +  L  L+ L L   K L++LP  I  L+ L+ L+LS
Sbjct: 90  IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK-LTTLPKEIGQLRNLQELDLS 148

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             S L   P+ V  +E+L +L L    +A +P  I  L  L+ L LN  K L  LP  I 
Sbjct: 149 FNS-LTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNK-LTTLPKEIR 206

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L++L+ L+L    +L  +P  +G++++L+ L++  T +      I  ++NL++L    +
Sbjct: 207 QLRNLQELDLHRN-QLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 265

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDI 237
                P       +L   +L ++       LP   G + +L  LDL    L    +P +I
Sbjct: 266 QLTTLPKEIGELQNLEILVLRENRITA---LPKEIGQLQNLQWLDLHQNQL--TILPKEI 320

Query: 238 DNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
             L +L+ L L++N   TLP  I  L NL+EL L D  +L +LP+    LQ +R 
Sbjct: 321 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL-DENQLTTLPKEIEQLQNLRV 374



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 6/269 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L +L L+   +T +P  I  L  L+ L L   + L++LP  I  L+ L+TL L 
Sbjct: 182 IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQ-LTTLPKEIGQLQNLKTLNLI 240

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P  I  L  LE+L L E + +  LP  I 
Sbjct: 241 -VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR-ITALPKEIG 298

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L    +L  +P  +G++++L+ LD+    +      I  ++NL+ L     
Sbjct: 299 QLQNLQWLDLHQN-QLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 357

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           +L   +  +  +   +  + SL  L L    L  + +P +I  L
Sbjct: 358 QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL--STLPKEIGQL 415

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEEL 269
            +L+ L L  N   TLP  I  L NL+EL
Sbjct: 416 QNLQVLALISNQLTTLPKEIGQLQNLQEL 444



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 52/228 (22%)

Query: 55  RTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           RTL+L    KL   P+ +  +++L +L L   S+  +P  I  L  L+ L L+   +L  
Sbjct: 51  RTLDLR-YQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLS-FNSLTT 108

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           LP  +  L++L+ LNL+   KL  +P  +G++ +L+ELD+S                   
Sbjct: 109 LPKEVGQLENLQRLNLNSQ-KLTTLPKEIGQLRNLQELDLS------------------- 148

Query: 175 LYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIP 234
             F+     P                              + +L +LDL    L  A +P
Sbjct: 149 --FNSLTTLPKEVGQ-------------------------LENLQRLDLHQNRL--ATLP 179

Query: 235 SDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +I  L +L+EL LN N   TLP  I  L NL+EL+L    +L +LP+
Sbjct: 180 MEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHR-NQLTTLPK 226


>gi|148908728|gb|ABR17471.1| unknown [Picea sitchensis]
          Length = 583

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 156/345 (45%), Gaps = 62/345 (17%)

Query: 1   MASMKDLSDLYLDGTSITE-VPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
             ++ +L  L   G S  E +P S   L  L+ L LKGC  L+ L  T+ +++ L +L+L
Sbjct: 36  FGNLTNLQYLNFYGCSRMETLPHSFGSLIRLKHLCLKGCSQLTLLGRTLGNIRTLESLDL 95

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLN-ECKNLVRLPSS 118
           S C K++  P  V     L KL+L  T + ++PS I  L  LE+L ++ E  ++  LP S
Sbjct: 96  SDCQKMEVLPPQVTHQWSLEKLFLWNTKLKDLPSDIGNLSNLEILRVSFEESSMEMLPPS 155

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS 178
              LKSLK L L G    + +PD++ +++ L +L +    I    + +  +K+L+ L   
Sbjct: 156 FGKLKSLKQLTLFGGI-WKCLPDSVAELKQLTDLTIDCGRIEYLPAGVIEVKSLKILKVI 214

Query: 179 GCNEPPASASWHLHLPF----NLLGKSSCP-------------VALMLPSL--------- 212
            C   P        +PF    N+ GK + P             + L L  L         
Sbjct: 215 RC---PLR-----KVPFGRVENVEGKDASPDQSGGKLLNQSGRMLLRLKQLDLHGTRITE 266

Query: 213 ----TGVC-SLTKLDLSDC-------GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASI 260
                G+C +L +LD+SDC        L +  I  D++  ++LK +             I
Sbjct: 267 LSFAEGICPNLRQLDISDCLELVEVGALPQTLISLDLNGCYALKRI-----------TGI 315

Query: 261 SGLLNLEELELEDCKRLQSLPQIPPNLQFV--RANGCSSLVTLFG 303
            GL  L EL++  C+ ++ LP +   +  V  R  GC  L ++ G
Sbjct: 316 CGLTKLRELDMRKCEAVEELPGLETLISLVHLRVFGCCKLQSITG 360



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 34/225 (15%)

Query: 63  SKLKKFPQIVASMEDLSKLYLDGTSIAEV-PSSIELLPGLELLYLNECKNLVRLPSSING 121
           + +K  P    ++ +L  L L G+   E+ P+S   L  L+ L    C  +  LP S   
Sbjct: 3   ASMKLLPNAFGNLTNLQHLNLTGSCDLEMLPNSFGNLTNLQYLNFYGCSRMETLPHSFGS 62

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN 181
           L  LK L L GC +L  +  TLG + +LE LD+S              + +  L      
Sbjct: 63  LIRLKHLCLKGCSQLTLLGRTLGNIRTLESLDLSDC------------QKMEVL------ 104

Query: 182 EPPASASWHLHLPF--NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAA---IPSD 236
            P  +  W L   F  N   K        LPS  G  +L+ L++      E++   +P  
Sbjct: 105 PPQVTHQWSLEKLFLWNTKLKD-------LPSDIG--NLSNLEILRVSFEESSMEMLPPS 155

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
              L SLK+L L    +  LP S++ L  L +L + DC R++ LP
Sbjct: 156 FGKLKSLKQLTLFGGIWKCLPDSVAELKQLTDLTI-DCGRIEYLP 199



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L L GC  L  L RT+  ++ L +L+LS   K    P   + +  L ++ L  T
Sbjct: 63  LIRLKHLCLKGCSQLTLLGRTLGNIRTLESLDLSDCQKMEVLPPQVTHQWSLEKLFLWNT 122

Query: 740 AIRGLPASIELLSG-NILSNLKDCKNLKSLPSTINGLRSLRMM---------YPSGCSKL 789
            ++ LP+ I  LS   IL    +  +++ LP +   L+SL+ +          P   ++L
Sbjct: 123 KLKDLPSDIGNLSNLEILRVSFEESSMEMLPPSFGKLKSLKQLTLFGGIWKCLPDSVAEL 182

Query: 790 KNVTE---TLGKVESL 802
           K +T+     G++E L
Sbjct: 183 KQLTDLTIDCGRIEYL 198



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 14/143 (9%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGT 739
           L  L  L L G  +LE LP +   L  L  LN  G S+    P    S  +L  + L+G 
Sbjct: 15  LTNLQHLNLTGSCDLEMLPNSFGNLTNLQYLNFYGCSRMETLPHSFGSLIRLKHLCLKGC 74

Query: 740 AIRGLPASIELLS---GNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
                 + + LL    GNI +    +L DC+ ++ LP  +    SL  ++    +KLK++
Sbjct: 75  ------SQLTLLGRTLGNIRTLESLDLSDCQKMEVLPPQVTHQWSLEKLFLWN-TKLKDL 127

Query: 793 TETLGKVESLEVRLSSWNRPKMQ 815
              +G + +LE+   S+    M+
Sbjct: 128 PSDIGNLSNLEILRVSFEESSME 150


>gi|42568353|ref|NP_199459.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008006|gb|AED95389.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1127

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 219/532 (41%), Gaps = 123/532 (23%)

Query: 5    KDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            ++L  L +  + + ++   +  L GL  + L+G +NL  +P  +S    L TL+LS CS 
Sbjct: 610  ENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIP-DLSMATNLETLKLSSCS- 667

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
                                  S+ E+PSSI+ L  L  L ++ C +L  +PS +N LKS
Sbjct: 668  ----------------------SLVELPSSIQYLNKLNDLDMSYCDHLETIPSGVN-LKS 704

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPP 184
            L  LNLSGC +L++  D      ++  LD+  TA      S   ++NL  L    C    
Sbjct: 705  LDRLNLSGCSRLKSFLDI---PTNISWLDIGQTA---DIPSNLRLQNLDELIL--CER-- 754

Query: 185  ASASWHLHLPFNLLGKSSCPVALMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDNLHSL 243
                                V L  P +T +  +LT+L  S+       +PS I NL+ L
Sbjct: 755  --------------------VQLRTPLMTMLSPTLTRLTFSN-NPSFVEVPSSIQNLYQL 793

Query: 244  KEL-YLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ-------------- 288
            + L  +N  N VTLP  I+ L +L  L+L  C +L++ P I  N+               
Sbjct: 794  EHLEIMNCRNLVTLPTGIN-LDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPL 852

Query: 289  ---------FVRANGCSSLVTL---FGALK-LCRSKYTIINCI------------DSLKL 323
                     ++  NGCS+L+ +      LK L R+ ++  +C+            + +KL
Sbjct: 853  SIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADFS--DCVELTEASWNGSSSEMVKL 910

Query: 324  LRKNGLAISMLREY----LELQA-VSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVTRPS 378
            L  +  +   L       L+L A + +    + ++  G ++P +F ++  G SI++   S
Sbjct: 911  LPADNFSTVKLNFINCFKLDLTALIQNQTFFMQLILTGEEVPSYFTHRTSGDSISLPHIS 970

Query: 379  YLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHY--IYFRGKF-- 434
                      F  C V  V   ST +  F      E+ C        H+    F G F  
Sbjct: 971  V---CQSFFSFRGCTVIDVDSFSTISVSFDI----EVCCRFIDRFGNHFDSTDFPGYFIT 1023

Query: 435  ----GHVVSDHLWLLFLPRHGH--NWQFESNLIRLSFRSISDPT-WKVKRCG 479
                GH+V    +  F        + QF  + + + FR  +D +  K+K CG
Sbjct: 1024 TKLGGHLVVFDCYFPFNEEFTTFLDGQFNYDHVDIQFRLTNDNSQLKLKGCG 1075



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 46/243 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSS---LPVTISSLKCLRTL 57
           +  + DL   Y D   +  +PS + L   L+ L L GC  L S   +P  IS L   +T 
Sbjct: 679 LNKLNDLDMSYCD--HLETIPSGVNL-KSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTA 735

Query: 58  ------------ELSGCSKLK-KFPQIVASMEDLSKL-YLDGTSIAEVPSSIELLPGLEL 103
                       EL  C +++ + P +      L++L + +  S  EVPSSI+ L  LE 
Sbjct: 736 DIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPSSIQNLYQLEH 795

Query: 104 LYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPT 163
           L +  C+NLV LP+ IN L SL +L+LS C +L+  PD      ++ +L++S TAI    
Sbjct: 796 LEIMNCRNLVTLPTGIN-LDSLISLDLSHCSQLKTFPDI---STNISDLNLSYTAIEEVP 851

Query: 164 SSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDL 223
            SI  +  L  L  +GC+              NLL  S        P+++ +  L + D 
Sbjct: 852 LSIEKLSLLCYLDMNGCS--------------NLLCVS--------PNISKLKHLERADF 889

Query: 224 SDC 226
           SDC
Sbjct: 890 SDC 892



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 664 LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPE 723
            S+     E+  +I+ L+ L  L +  C+NL  LP  I+ L  L +L+LS  S+ + FP+
Sbjct: 774 FSNNPSFVEVPSSIQNLYQLEHLEIMNCRNLVTLPTGIN-LDSLISLDLSHCSQLKTFPD 832

Query: 724 ITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYP 783
           I+++   + +++L  TAI  +P SIE LS     ++  C NL  +   I+ L+ L     
Sbjct: 833 ISTN---ISDLNLSYTAIEEVPLSIEKLSLLCYLDMNGCSNLLCVSPNISKLKHLERADF 889

Query: 784 SGCSKL 789
           S C +L
Sbjct: 890 SDCVEL 895



 Score = 43.1 bits (100), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 4/124 (3%)

Query: 682 GLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TA 740
            LV+L +   K LE+L   + +L  L  ++L G    +E P+++ + + L  + L   ++
Sbjct: 611 NLVKLQMQQSK-LEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATN-LETLKLSSCSS 668

Query: 741 IRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVE 800
           +  LP+SI+ L+     ++  C +L+++PS +N L+SL  +  SGCS+LK+  +    + 
Sbjct: 669 LVELPSSIQYLNKLNDLDMSYCDHLETIPSGVN-LKSLDRLNLSGCSRLKSFLDIPTNIS 727

Query: 801 SLEV 804
            L++
Sbjct: 728 WLDI 731


>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
 gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
          Length = 931

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 136/300 (45%), Gaps = 41/300 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L+ LY+    +  +P  IE L  L LL++     L+ +P  +  L  L  L++S
Sbjct: 78  IVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFD-NQLTKVPPGVCMLPSLEELDVS 136

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL  FP  V  ++ L KLY+    + EVPS +  LP LE+L +   K L   P  + 
Sbjct: 137 K-NKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNK-LSTFPPGVE 194

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L+ L+ LN+ G  +L  VP  +  + +LE L+     +      +  ++ LR LY    
Sbjct: 195 KLQKLRELNIYG-NQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYD- 252

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLD-LSDCGLGEAAIPSDIDN 239
                          N L +        +PS  GVCSL  L+ LS      +  P  ++ 
Sbjct: 253 ---------------NQLTE--------VPS--GVCSLPNLEGLSVYNNKLSTFPPGVEK 287

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELEL---------EDCKRLQSLPQIP-PNLQF 289
           L  L+ELY++ N    +P+ +  L NLE L +         +D  RL  L  +  PN QF
Sbjct: 288 LQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQF 347



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 20/284 (7%)

Query: 10  LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP 69
           L L    +T +P  +  +T LE L L   K L+S+P  I  L+ L  LE+   + L   P
Sbjct: 18  LDLTNQGLTSIPEEVFDITDLEALDLSNNK-LTSIPEAIGRLQKLYRLEVHA-NMLTSLP 75

Query: 70  QIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLN 129
           Q + +++ L+ LY+    +A +P  IE L  L LL + +   L ++P  +  L SL+ L+
Sbjct: 76  QAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFD-NQLTKVPPGVCMLPSLEELD 134

Query: 130 LSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNE----PPA 185
           +S   KL   P  + K++ L +L +    +    S +  + NL  L   G N+    PP 
Sbjct: 135 VSK-NKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGV-GNNKLSTFPPG 192

Query: 186 SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE-AAIPSDIDNLHSLK 244
                     N+ G     V        GVCSL  L++ + G  + +  P  ++ L  L+
Sbjct: 193 VEKLQKLRELNIYGNQLTEVP------PGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLR 246

Query: 245 ELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
           +LY+  N    +P+ +  L NLE L + + K    L   PP ++
Sbjct: 247 DLYIYDNQLTEVPSGVCSLPNLEGLSVYNNK----LSTFPPGVE 286



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 27/291 (9%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L  LY+    +TEVPS +  L  LE+L + G   LS+ P  +  L+ LR L + 
Sbjct: 147 VEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGV-GNNKLSTFPPGVEKLQKLRELNIY 205

Query: 61  G----------CS------------KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELL 98
           G          CS            KL  FP  V  ++ L  LY+    + EVPS +  L
Sbjct: 206 GNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPSGVCSL 265

Query: 99  PGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTA 158
           P LE L +   K L   P  +  L+ L+ L +    +L  VP  +  + +LE L V    
Sbjct: 266 PNLEGLSVYNNK-LSTFPPGVEKLQKLRELYIHNN-QLTEVPSGVCSLPNLEVLSVGMNP 323

Query: 159 IRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSL 218
           IRR    +  +  L++L    C                 L    C   ++   +  +  L
Sbjct: 324 IRRLPDDVTRLTRLKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNLQHL 383

Query: 219 TKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEEL 269
             L + +  L    +PS + +LH+L+ + L  N F T+P  +  L  +E+L
Sbjct: 384 WFLAVENNLL--RTLPSTMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKL 432



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 27/189 (14%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  ++ L +LY+    +TEVPS +  L  LE+L++ G   +  LP  ++ L  L+TL + 
Sbjct: 285 VEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSV-GMNPIRRLPDDVTRLTRLKTLGVP 343

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR-LPSSI 119
            C +  +FP+ +  ++ L KLY  G     VP  +  L  L  L +    NL+R LPS++
Sbjct: 344 NC-QFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNLQHLWFLAVE--NNLLRTLPSTM 400

Query: 120 NGLKSLKTLNL---------SGCCKL-------------ENVPDTLGKVESLEELDVSGT 157
           + L +L+ + L            C+L               +P  L + + L +LD+SG 
Sbjct: 401 SHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNITRLPTVLHRADKLRDLDISGN 460

Query: 158 AIRRPTSSI 166
            +  P   +
Sbjct: 461 PLTYPPQDV 469


>gi|449488740|ref|XP_004158158.1| PREDICTED: putative disease resistance protein At4g19050-like
           [Cucumis sativus]
          Length = 943

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 141/309 (45%), Gaps = 35/309 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +  L  L L  T I ++PSS+  L  L  +  +GC  L  LP+ +  L  L+ L++SG +
Sbjct: 233 LSKLRSLNLSKTGIEKLPSSLSKLDELRSINFRGCHCLKVLPI-LKGLVKLQLLDVSGAT 291

Query: 64  KLKKF-PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            L++   + + +++DL +L L  T I  VP  ++ +  L  L   +CK L+RLP+ + GL
Sbjct: 292 SLERLGDKSINTLQDLQQLDLSQTQIVHVPF-LKKMKQLSRLSYRDCKELIRLPN-LRGL 349

Query: 123 KSLKTLNLSGCCKLENVPD-TLGKVESLEELDVSGTAIRRPTSSI-----------FLMK 170
             L+ L+LSG  KL+ + D T  +   L+ LD+S TA+     +I             M 
Sbjct: 350 SGLQVLDLSGALKLKEIQDDTFSEDNDLKMLDLSKTAVSCLPCTIRNLSNLELLNLSEMS 409

Query: 171 NLRSLYFSGCNEPPASASWHLHLPFNLLGK---------------SSCPVALMLPSLTGV 215
            L  L     N    +   HL+L  +L+ K                 C     LPSLT +
Sbjct: 410 KLVELEDDTFNN--MACLRHLNLSKSLVEKLPSLNGLINIQELKLQECSKLQELPSLTAL 467

Query: 216 CSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
             L  LDLS C    E        ++  L+ L L+      LP  +SGL NL  L L +C
Sbjct: 468 KKLEVLDLSGCVSFKEFKEGESFIHMTYLQRLDLSETKIKNLP-DLSGLHNLSHLLLRNC 526

Query: 275 KRLQSLPQI 283
             L  LP I
Sbjct: 527 VNLTKLPCI 535



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 61/341 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             ++K+L  L +    I  +P S+ +L  L  L LK C  L  +   + +LK L  LE+S
Sbjct: 159 FTTLKNLQVLAIFRPRIKALPVSLSMLGNLHFLVLKDCDLLEKID-DLVNLKALTVLEIS 217

Query: 61  GCSKLKKFPQ-IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
               +K  P+ +   +  L  L L  T I ++PSS+  L  L  +    C  L  LP  +
Sbjct: 218 NAKNVKHIPENLFECLSKLRSLNLSKTGIEKLPSSLSKLDELRSINFRGCHCLKVLPI-L 276

Query: 120 NGLKSLKTLNLSGCCKLENVPD-TLGKVESLEELDVSGTAIRRPTSSIFL--MKNLRSLY 176
            GL  L+ L++SG   LE + D ++  ++ L++LD+S T I       FL  MK L  L 
Sbjct: 277 KGLVKLQLLDVSGATSLERLGDKSINTLQDLQQLDLSQTQI---VHVPFLKKMKQLSRLS 333

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL---------DLSDCG 227
           +  C E        + LP NL G S     L +  L+G   L ++         DL    
Sbjct: 334 YRDCKEL-------IRLP-NLRGLS----GLQVLDLSGALKLKEIQDDTFSEDNDLKMLD 381

Query: 228 LGEAAI---PSDI-------------------------DNLHSLKELYLNRNNFVTLPAS 259
           L + A+   P  I                         +N+  L+ L L+++    LP S
Sbjct: 382 LSKTAVSCLPCTIRNLSNLELLNLSEMSKLVELEDDTFNNMACLRHLNLSKSLVEKLP-S 440

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRANGCSSL 298
           ++GL+N++EL+L++C +LQ LP +     L+ +  +GC S 
Sbjct: 441 LNGLINIQELKLQECSKLQELPSLTALKKLEVLDLSGCVSF 481



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 19/263 (7%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP--QIVA 73
           S+ E   S+  L  ++ L L+ C  L  LP ++++LK L  L+LSGC   K+F   +   
Sbjct: 433 SLVEKLPSLNGLINIQELKLQECSKLQELP-SLTALKKLEVLDLSGCVSFKEFKEGESFI 491

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            M  L +L L  T I  +P  +  L  L  L L  C NL +LP  I+  K LK LN+ G 
Sbjct: 492 HMTYLQRLDLSETKIKNLP-DLSGLHNLSHLLLRNCVNLTKLP-CISSFK-LKELNVCGA 548

Query: 134 CKLEN----VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
             L +    +PD + +   LE L++S T +R    + +   NLR L   GC E   +   
Sbjct: 549 ENLRDWEAELPDNMNQ---LEILNLSETQLRSVPLNNY--TNLRELSLRGC-ELQTTVLL 602

Query: 190 HLHLPFNLLGKSSCPV-ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                  +L  S  P+ +L + ++T + +L +L L+DC   +  IP+ ++ L  L+ L+L
Sbjct: 603 DKLTNLEVLDLSRTPINSLQIQTITNLTNLRQLLLTDCSELQ-EIPT-LEPLVKLEALHL 660

Query: 249 NRNNFVTLPASISGLLNLEELEL 271
                   P  ++ +  L  L+L
Sbjct: 661 KGTKVKKFPCQMAKVTRLMHLDL 683



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 10/95 (10%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS--SRDQLLEIHLE 737
           L  + +L L  C  L+ LP +++ALK L  L+LSG   F+EF E  S      L  + L 
Sbjct: 444 LINIQELKLQECSKLQELP-SLTALKKLEVLDLSGCVSFKEFKEGESFIHMTYLQRLDLS 502

Query: 738 GTAIRGLPASIELLSG-NILSN--LKDCKNLKSLP 769
            T I+ LP     LSG + LS+  L++C NL  LP
Sbjct: 503 ETKIKNLPD----LSGLHNLSHLLLRNCVNLTKLP 533


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 39/279 (13%)

Query: 21  PSSIELLTGLELLTLK-GCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLS 79
           P   +++  + LLTL+   KNL  LP  +  LK L  L+LS    ++     +  + +L 
Sbjct: 14  PKEWDIMGKMTLLTLELRYKNLKQLPDELFELKDLEALDLSRNMNME-LSNGLIKLTNLK 72

Query: 80  KLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENV 139
            L L G ++A VP+++  LP LE L L+  +N+  LP  ++GL +L  ++L   C L+++
Sbjct: 73  LLSLAGCNLATVPAAVMKLPQLETLILSNNENIT-LPDDMSGLVNLTAIHLD-WCNLDSL 130

Query: 140 PDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC---NEPPA----------- 185
           P  + K+  L  LD+SG         +  ++N++ L    C     PPA           
Sbjct: 131 PPVVLKLSHLRSLDLSGNEQISLPDELCRLENIKELRLYACFMATVPPAVLKLTQLEKLN 190

Query: 186 -SASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLK 244
            S +W +HLP  L   ++  V ++L                 G G   +PS    L  L+
Sbjct: 191 LSGNWGIHLPDGLSRLTNIRVLILL-----------------GTGMDTVPSVAWRLTQLE 233

Query: 245 ELYLNRNNF--VTLPASISGLLNLEELELEDCKRLQSLP 281
            LYL+ N     TLPA +  L N++ L L  C+ L +LP
Sbjct: 234 RLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHCQ-LHTLP 271



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 19/285 (6%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +KDL  L L      E+ + +  LT L+LL+L GC NL+++P  +  L  L TL LS   
Sbjct: 45  LKDLEALDLSRNMNMELSNGLIKLTNLKLLSLAGC-NLATVPAAVMKLPQLETLILSNNE 103

Query: 64  KLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLK 123
            +   P  ++ + +L+ ++LD  ++  +P  +  L  L  L L+  +  + LP  +  L+
Sbjct: 104 NIT-LPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLSHLRSLDLSGNEQ-ISLPDELCRLE 161

Query: 124 SLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCN-E 182
           ++K L L  C  +  VP  + K+  LE+L++SG         +  + N+R L   G   +
Sbjct: 162 NIKELRLYACF-MATVPPAVLKLTQLEKLNLSGNWGIHLPDGLSRLTNIRVLILLGTGMD 220

Query: 183 PPASASWHL------HLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
              S +W L      +L  N L  S+ P       +  + ++  L LS C L    +P +
Sbjct: 221 TVPSVAWRLTQLERLYLSLNPLQTSTLPA-----KVGHLTNIKHLHLSHCQL--HTLPPE 273

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           +  L  L+ L L+ N   TLPA +  L  ++ L+L  C+ L +LP
Sbjct: 274 VGRLTQLEWLDLSSNPLQTLPAEVGQLTKVKHLDLSYCQ-LHTLP 317



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 32/306 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  + +L  L L G ++  VP+++  L  LE L L   +N++ LP  +S L  L  + L 
Sbjct: 65  LIKLTNLKLLSLAGCNLATVPAAVMKLPQLETLILSNNENIT-LPDDMSGLVNLTAIHLD 123

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            C+ L   P +V  +  L  L L G     +P  +  L  ++ L L  C  +  +P ++ 
Sbjct: 124 WCN-LDSLPPVVLKLSHLRSLDLSGNEQISLPDELCRLENIKELRLYAC-FMATVPPAVL 181

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFS-- 178
            L  L+ LNLSG   + ++PD L ++ ++  L + GT +    S  + +  L  LY S  
Sbjct: 182 KLTQLEKLNLSGNWGI-HLPDGLSRLTNIRVLILLGTGMDTVPSVAWRLTQLERLYLSLN 240

Query: 179 --GCNEPPASASW-----HLHL----------------PFNLLGKSSCPVALMLPSLTGV 215
               +  PA         HLHL                    L  SS P+  +   +  +
Sbjct: 241 PLQTSTLPAKVGHLTNIKHLHLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQL 300

Query: 216 CSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
             +  LDLS C L    +P ++  L  L+ L L  N   TLP  +  L N++ L+L  C+
Sbjct: 301 TKVKHLDLSYCQL--HTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLSHCQ 358

Query: 276 RLQSLP 281
            L +LP
Sbjct: 359 -LHTLP 363



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 25/202 (12%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLK-GCKNLSSLPVTISSLKCLRTLEL 59
           ++ + ++  L L GT +  VPS    LT LE L L       S+LP  +  L  ++ L L
Sbjct: 203 LSRLTNIRVLILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIKHLHL 262

Query: 60  SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECK--------- 110
           S C +L   P  V  +  L  L L    +  +P+ +  L  ++ L L+ C+         
Sbjct: 263 SHC-QLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTKVKHLDLSYCQLHTLPPEVG 321

Query: 111 ---NLVRL----------PSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
               L RL          P  +  L ++K L LS C +L  +P  +G++  LE LD+S  
Sbjct: 322 RLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLSHC-QLHTLPPEVGRLTQLEWLDLSSN 380

Query: 158 AIRRPTSSIFLMKNLRSLYFSG 179
            ++   + +  + N+  L+ SG
Sbjct: 381 PLQTLPAEVGQLTNVSYLHVSG 402



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 214 GVCSLTKLDL-SDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELE 272
           G+  LT L L S  G   A +P+ +  L  L+ L L+ N  +TLP  +SGL+NL  + L+
Sbjct: 64  GLIKLTNLKLLSLAGCNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAIHLD 123

Query: 273 DCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCR 309
            C  L SLP +   L  +R+   S    +    +LCR
Sbjct: 124 WCN-LDSLPPVVLKLSHLRSLDLSGNEQISLPDELCR 159


>gi|168032879|ref|XP_001768945.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679857|gb|EDQ66299.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 323

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 13/301 (4%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+T +P+ +  LT L    L G  +L+SLP    +L  L T ++  CS L   P  +  +
Sbjct: 13  SLTSLPNELGNLTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNELGKL 72

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCC 134
             L+   L G +S+  +P+ +  L  L  L +  C +L  LP+ +  L SL TLN   C 
Sbjct: 73  TSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNKECCS 132

Query: 135 KLENVPDTLGKVESLEELDV----SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWH 190
            L  +P+ LG + SL  +D+    S T++     ++  + NL   ++S     P      
Sbjct: 133 SLTLLPNELGNLTSLTIIDIGWCSSLTSLPNELDNLTSLTNLNIQWYSSLVSLPNELDNL 192

Query: 191 LHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN 249
             L    +    C     LP+ +G + SLT L +++C     ++P+++ NL SL    + 
Sbjct: 193 TSLTT--INIQWCSSLTSLPNESGNLISLTTLRMNECS-SLTSLPNELGNLTSLTTFDIQ 249

Query: 250 RN-NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTLFGAL 305
              +  +LP  +  L +L  L ++ C  L SLP    N   L  +R N CSSL +L   L
Sbjct: 250 GCLSLTSLPNELGNLTSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNVL 309

Query: 306 K 306
            
Sbjct: 310 D 310



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 136/323 (42%), Gaps = 53/323 (16%)

Query: 109 CKNLVRLPSSINGLKSLKTLNLSG------------------------CCKLENVPDTLG 144
           C +L  LP+ +  L SL T +LSG                        C  L ++P+ LG
Sbjct: 11  CSSLTSLPNELGNLTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNELG 70

Query: 145 KVESLEELDVSG----TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGK 200
           K+ SL   D+SG    T++     ++  +  L   Y S     P        L    L K
Sbjct: 71  KLTSLTTFDLSGWSSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTT--LNK 128

Query: 201 SSCPVALMLPS-LTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLN-RNNFVTLPA 258
             C    +LP+ L  + SLT +D+  C     ++P+++DNL SL  L +   ++ V+LP 
Sbjct: 129 ECCSSLTLLPNELGNLTSLTIIDIGWCS-SLTSLPNELDNLTSLTNLNIQWYSSLVSLPN 187

Query: 259 SISGLLNLEELELEDCKRLQSLPQIPPN---LQFVRANGCSSLVTL---FGALKLCRSKY 312
            +  L +L  + ++ C  L SLP    N   L  +R N CSSL +L    G L    + +
Sbjct: 188 ELDNLTSLTTINIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNELGNLT-SLTTF 246

Query: 313 TIINCIDSLKLLRKNGLAISMLREYLELQAVSD----PGHKLSIVFPGSQIPKWFMYQNE 368
            I  C+    L  + G   S+    L +Q  S     P         G+ I    +  NE
Sbjct: 247 DIQGCLSLTSLPNELGNLTSL--TTLNIQWCSSLTSLPNES------GNLISLTTLRMNE 298

Query: 369 GSSITVTRPSYLYNVNKVVGFAI 391
            SS+T + P+ L N+  +  F I
Sbjct: 299 CSSLT-SLPNVLDNLTSLTTFDI 320



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 1/119 (0%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASM 75
           S+T +P+    L  L  L +  C +L+SLP  + +L  L T ++ GC  L   P  + ++
Sbjct: 205 SLTSLPNESGNLISLTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNL 264

Query: 76  EDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
             L+ L +   +S+  +P+    L  L  L +NEC +L  LP+ ++ L SL T ++  C
Sbjct: 265 TSLTTLNIQWCSSLTSLPNESGNLISLTTLRMNECSSLTSLPNVLDNLTSLTTFDIGRC 323



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 9/124 (7%)

Query: 691 CKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIE 749
           C +L  LP  +  L  L+ LN+   S     P    +   L  I+++  +++  LP    
Sbjct: 155 CSSLTSLPNELDNLTSLTNLNIQWYSSLVSLPNELDNLTSLTTINIQWCSSLTSLPNE-- 212

Query: 750 LLSGNILS----NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR 805
             SGN++S     + +C +L SLP+ +  L SL      GC  L ++   LG + SL   
Sbjct: 213 --SGNLISLTTLRMNECSSLTSLPNELGNLTSLTTFDIQGCLSLTSLPNELGNLTSLTTL 270

Query: 806 LSSW 809
              W
Sbjct: 271 NIQW 274



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG- 738
           L  L    L+G  +L  LP     L  L+T ++   S     P        L    L G 
Sbjct: 24  LTSLTTFDLSGWSSLTSLPNEFGNLTSLTTFDIQWCSSLTSLPNELGKLTSLTTFDLSGW 83

Query: 739 TAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGK 798
           +++  LP  +  L+     N++ C +L SLP+ +  L SL  +    CS L  +   LG 
Sbjct: 84  SSLTSLPNELGNLTSLTTLNMEYCSSLTSLPNELGNLTSLTTLNKECCSSLTLLPNELGN 143

Query: 799 VESLEV 804
           + SL +
Sbjct: 144 LTSLTI 149


>gi|449469418|ref|XP_004152417.1| PREDICTED: putative disease resistance protein At4g19050-like
           [Cucumis sativus]
          Length = 1078

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 141/309 (45%), Gaps = 35/309 (11%)

Query: 4   MKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCS 63
           +  L  L L  T I ++PSS+  L  L  +  +GC  L  LP+ +  L  L+ L++SG +
Sbjct: 325 LSKLRSLNLSKTGIEKLPSSLSKLDELRSINFRGCHCLKVLPI-LKGLVKLQLLDVSGAT 383

Query: 64  KLKKF-PQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGL 122
            L++   + + +++DL +L L  T I  VP  ++ +  L  L   +CK L+RLP+ + GL
Sbjct: 384 SLERLGDKSINTLQDLQQLDLSQTQIVHVPF-LKKMKQLSRLSYRDCKELIRLPN-LRGL 441

Query: 123 KSLKTLNLSGCCKLENVPD-TLGKVESLEELDVSGTAIRRPTSSI-----------FLMK 170
             L+ L+LSG  KL+ + D T  +   L+ LD+S TA+     +I             M 
Sbjct: 442 SGLQVLDLSGALKLKEIQDDTFSEDNDLKMLDLSKTAVSCLPCTIRYLSNLELLNLSEMS 501

Query: 171 NLRSLYFSGCNEPPASASWHLHLPFNLLGK---------------SSCPVALMLPSLTGV 215
            L  L     N    +   HL+L  +L+ K                 C     LPSLT +
Sbjct: 502 KLVELEDDTFNN--MACLRHLNLSKSLVEKLPSLNGLINIQELKLQECSKLQELPSLTAL 559

Query: 216 CSLTKLDLSDC-GLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDC 274
             L  LDLS C    E        ++  L+ L L+      LP  +SGL NL  L L +C
Sbjct: 560 KKLEVLDLSGCVSFKEFKEGESFIHMTYLQRLDLSETKIKNLP-DLSGLHNLSHLLLRNC 618

Query: 275 KRLQSLPQI 283
             L  LP I
Sbjct: 619 VNLTKLPCI 627



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 61/341 (17%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
             ++K+L  L +    I  +P S+ +L  L  L LK C  L  +   + +LK L  LE+S
Sbjct: 251 FTTLKNLQVLAIFRPRIKALPVSLSMLGNLHFLVLKDCDLLEKID-DLVNLKALTVLEIS 309

Query: 61  GCSKLKKFPQ-IVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
               +K  P+ +   +  L  L L  T I ++PSS+  L  L  +    C  L  LP  +
Sbjct: 310 NAKNVKHIPENLFECLSKLRSLNLSKTGIEKLPSSLSKLDELRSINFRGCHCLKVLPI-L 368

Query: 120 NGLKSLKTLNLSGCCKLENVPD-TLGKVESLEELDVSGTAIRRPTSSIFL--MKNLRSLY 176
            GL  L+ L++SG   LE + D ++  ++ L++LD+S T I       FL  MK L  L 
Sbjct: 369 KGLVKLQLLDVSGATSLERLGDKSINTLQDLQQLDLSQTQI---VHVPFLKKMKQLSRLS 425

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKL---------DLSDCG 227
           +  C E        + LP NL G S     L +  L+G   L ++         DL    
Sbjct: 426 YRDCKEL-------IRLP-NLRGLS----GLQVLDLSGALKLKEIQDDTFSEDNDLKMLD 473

Query: 228 LGEAAI---PSDI-------------------------DNLHSLKELYLNRNNFVTLPAS 259
           L + A+   P  I                         +N+  L+ L L+++    LP S
Sbjct: 474 LSKTAVSCLPCTIRYLSNLELLNLSEMSKLVELEDDTFNNMACLRHLNLSKSLVEKLP-S 532

Query: 260 ISGLLNLEELELEDCKRLQSLPQIPP--NLQFVRANGCSSL 298
           ++GL+N++EL+L++C +LQ LP +     L+ +  +GC S 
Sbjct: 533 LNGLINIQELKLQECSKLQELPSLTALKKLEVLDLSGCVSF 573



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 19/263 (7%)

Query: 16  SITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFP--QIVA 73
           S+ E   S+  L  ++ L L+ C  L  LP ++++LK L  L+LSGC   K+F   +   
Sbjct: 525 SLVEKLPSLNGLINIQELKLQECSKLQELP-SLTALKKLEVLDLSGCVSFKEFKEGESFI 583

Query: 74  SMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGC 133
            M  L +L L  T I  +P  +  L  L  L L  C NL +LP  I+  K LK LN+ G 
Sbjct: 584 HMTYLQRLDLSETKIKNLP-DLSGLHNLSHLLLRNCVNLTKLP-CISSFK-LKELNVCGA 640

Query: 134 CKLEN----VPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASW 189
             L +    +PD + +   LE L++S T +R    + +   NLR L   GC E   +   
Sbjct: 641 ENLRDWEAELPDNMNQ---LEILNLSETQLRSVPLNNY--TNLRELSLRGC-ELQTTVLL 694

Query: 190 HLHLPFNLLGKSSCPV-ALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
                  +L  S   + +L + ++T + +L +L L+DC   +  IP+ ++ L  L+ L+L
Sbjct: 695 DKLTNLEVLDLSRTLINSLQIQTITNLTNLRQLLLTDCSELQ-EIPT-LEPLVKLEALHL 752

Query: 249 NRNNFVTLPASISGLLNLEELEL 271
                   P  ++ +  L  L+L
Sbjct: 753 KGTKVKKFPCQMAKVTRLMHLDL 775



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 10/95 (10%)

Query: 680 LFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITS--SRDQLLEIHLE 737
           L  + +L L  C  L+ LP +++ALK L  L+LSG   F+EF E  S      L  + L 
Sbjct: 536 LINIQELKLQECSKLQELP-SLTALKKLEVLDLSGCVSFKEFKEGESFIHMTYLQRLDLS 594

Query: 738 GTAIRGLPASIELLSG-NILSN--LKDCKNLKSLP 769
            T I+ LP     LSG + LS+  L++C NL  LP
Sbjct: 595 ETKIKNLPD----LSGLHNLSHLLLRNCVNLTKLP 625


>gi|297805566|ref|XP_002870667.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316503|gb|EFH46926.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 57/338 (16%)

Query: 43  SLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTS-IAEVPSSIELLPGL 101
           SLP+     +CL  L + G SKL+K    +  + +L K+ L  +S + E+P+ +     L
Sbjct: 581 SLPLAFKP-ECLVELYM-GSSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNL 637

Query: 102 ELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
           + L L  C++LV +PSSI  L+ L+ L  SGC KL+ +P  +  + SLEE+++S  +  R
Sbjct: 638 KTLTLTGCESLVEIPSSILNLQKLEMLYASGCSKLQVIPTNI-NLASLEEVNMSNCS--R 694

Query: 162 PTSSIFLMKNLRSLYFSGC--NEPPAS--ASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
             S   +  N++ LY +G    E PAS    W   L F  +G  S      +P      S
Sbjct: 695 LRSFPDMSSNIKRLYVAGTMIKEFPASIVGQW-CRLDFLQIGSRSFKRLTHVPE-----S 748

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           +T LDL +         SDI                  +P  I GL +L  L +E+C +L
Sbjct: 749 VTHLDLRN---------SDIK----------------MIPDCIIGLSHLVSLLVENCTKL 783

Query: 278 QSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRKNGLAISMLREY 337
            S+    P+L  + A+ C SL ++  +     SK    NC   LKL +++   I      
Sbjct: 784 VSIQGHSPSLVTLFADHCISLQSVCCSFHGPISKSMFYNC---LKLDKESKRGI------ 834

Query: 338 LELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSSITVT 375
                +   G+K SI  PG +IP  F +Q  G+ IT++
Sbjct: 835 -----IQQSGNK-SICLPGKEIPAEFTHQTSGNLITIS 866



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 48/188 (25%)

Query: 15  TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV-- 72
           +++ E+P+ +   T L+ LTL GC++L  +P +I +L+ L  L  SGCSKL+  P  +  
Sbjct: 623 SNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSILNLQKLEMLYASGCSKLQVIPTNINL 681

Query: 73  ASMED------------------LSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVR 114
           AS+E+                  + +LY+ GT I E P+SI                  R
Sbjct: 682 ASLEEVNMSNCSRLRSFPDMSSNIKRLYVAGTMIKEFPASI-------------VGQWCR 728

Query: 115 LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRS 174
           L     G +S K        +L +VP      ES+  LD+  + I+     I  + +L S
Sbjct: 729 LDFLQIGSRSFK--------RLTHVP------ESVTHLDLRNSDIKMIPDCIIGLSHLVS 774

Query: 175 LYFSGCNE 182
           L    C +
Sbjct: 775 LLVENCTK 782



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 25/129 (19%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           LV+L + G   LE+L   I  L  L  +NL   S  +E P ++           + T ++
Sbjct: 591 LVELYM-GSSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPNLS-----------KATNLK 638

Query: 743 GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L              L  C++L  +PS+I  L+ L M+Y SGCSKL+ +   +      
Sbjct: 639 TL-------------TLTGCESLVEIPSSILNLQKLEMLYASGCSKLQVIPTNINLASLE 685

Query: 803 EVRLSSWNR 811
           EV +S+ +R
Sbjct: 686 EVNMSNCSR 694



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
           L  L  +GC  L+ +P  I+ L  L  +N+S  S+ R FP+++S+  +L   ++ GT I+
Sbjct: 661 LEMLYASGCSKLQVIPTNIN-LASLEEVNMSNCSRLRSFPDMSSNIKRL---YVAGTMIK 716

Query: 743 GLPASI 748
             PASI
Sbjct: 717 EFPASI 722


>gi|6449046|gb|AAF08790.1| downy mildew resistance protein RPP5 [Arabidopsis thaliana]
          Length = 1361

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 28/157 (17%)

Query: 28   TGLELLTLKGCKNLSSLPVTISSLKCLR-----------------------TLELSGCSK 64
            T L+LL L GCK+L +LP TI +L+ LR                       TL+LSGCS 
Sbjct: 946  TNLKLLCLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDVNLSSLETLDLSGCSS 1005

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L+ FP I     ++  LYL+ T+I E+P  +     LE L LN CK+LV LPS+I  L++
Sbjct: 1006 LRTFPLIST---NIVCLYLENTAIEEIP-DLSKATKLESLILNNCKSLVTLPSTIGNLQN 1061

Query: 125  LKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRR 161
            L+ L ++ C  LE +P  +  + SLE LD+SG +  R
Sbjct: 1062 LRRLYMNRCTGLELLPTDVN-LSSLETLDLSGCSSLR 1097



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 56/333 (16%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L +L L G  S+  +PSSI+  T L  L +  C+NL S P T+ +LK L  L+L+GC  
Sbjct: 781  NLEELDLFGCVSLVTLPSSIQNATKLIYLDMSECENLESFP-TVFNLKSLEYLDLTGCPN 839

Query: 65   LKKFP----------------------QIVAS---------------------------M 75
            L+ FP                      +IV                              
Sbjct: 840  LRNFPAIKMGCAWTRLSRTRLFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRS 899

Query: 76   EDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCK 135
            E L+ L + G  + ++   I+ L  LE + L+E +NL  LP  ++   +LK L LSGC  
Sbjct: 900  EQLTFLNVSGCKLEKLWEGIQSLGSLEEMDLSESENLKELPD-LSKATNLKLLCLSGCKS 958

Query: 136  LENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPF 195
            L  +P T+G +++L  L ++         +   + +L +L  SGC+          ++  
Sbjct: 959  LVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDVNLSSLETLDLSGCSSLRTFPLISTNIVC 1018

Query: 196  NLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVT 255
              L  ++      +P L+    L  L L++C      +PS I NL +L+ LY+NR   + 
Sbjct: 1019 LYLENTAIE---EIPDLSKATKLESLILNNCK-SLVTLPSTIGNLQNLRRLYMNRCTGLE 1074

Query: 256  LPASISGLLNLEELELEDCKRLQSLPQIPPNLQ 288
            L  +   L +LE L+L  C  L++ P I   ++
Sbjct: 1075 LLPTDVNLSSLETLDLSGCSSLRTFPLISTRIE 1107



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 154/349 (44%), Gaps = 53/349 (15%)

Query: 1    MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
            + S+K+++  Y    ++ E+P  + L   LE L L GC +L +LP +I +   L  L++S
Sbjct: 756  LGSLKEMNLRY--SNNLKEIPD-LSLAINLEELDLFGCVSLVTLPSSIQNATKLIYLDMS 812

Query: 61   GCSKLKKFPQIVASMEDLSKLYLDGT-SIAEVP-----------SSIELLP-GLELLYLN 107
             C  L+ FP  V +++ L  L L G  ++   P           S   L P G   + + 
Sbjct: 813  ECENLESFP-TVFNLKSLEYLDLTGCPNLRNFPAIKMGCAWTRLSRTRLFPEGRNEIVVE 871

Query: 108  ECKNLVRLPSSINGL-------------KSLKTLNLSGCCKLENVPDTLGKVESLEELDV 154
            +C     LP+ ++ L             + L  LN+SG CKLE + + +  + SLEE+D+
Sbjct: 872  DCFWNKNLPAGLDYLDCLMRCMPCEFRSEQLTFLNVSG-CKLEKLWEGIQSLGSLEEMDL 930

Query: 155  SGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLP-FNLLGKSSCPVALMLPSLT 213
            S +   +    +    NL+ L  SGC       S   +L     L  + C    +LP+  
Sbjct: 931  SESENLKELPDLSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDV 990

Query: 214  GVCSLTKLDLSDCG----------------LGEAAIPS--DIDNLHSLKELYLNR-NNFV 254
             + SL  LDLS C                 L   AI    D+     L+ L LN   + V
Sbjct: 991  NLSSLETLDLSGCSSLRTFPLISTNIVCLYLENTAIEEIPDLSKATKLESLILNNCKSLV 1050

Query: 255  TLPASISGLLNLEELELEDCKRLQSLPQIP--PNLQFVRANGCSSLVTL 301
            TLP++I  L NL  L +  C  L+ LP      +L+ +  +GCSSL T 
Sbjct: 1051 TLPSTIGNLQNLRRLYMNRCTGLELLPTDVNLSSLETLDLSGCSSLRTF 1099



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 143/329 (43%), Gaps = 64/329 (19%)

Query: 57   LELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLP 116
            +E S   KL    Q + S+++++  Y    ++ E+P  + L   LE L L  C +LV LP
Sbjct: 741  MEYSELEKLWDGTQSLGSLKEMNLRY--SNNLKEIPD-LSLAINLEELDLFGCVSLVTLP 797

Query: 117  SSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSI-----FLMKN 171
            SSI     L  L++S C  LE+ P T+  ++SLE LD++G    R   +I     +   +
Sbjct: 798  SSIQNATKLIYLDMSECENLESFP-TVFNLKSLEYLDLTGCPNLRNFPAIKMGCAWTRLS 856

Query: 172  LRSLYFSGCNEPPA-SASWHLHLPFNL---------------------LGKSSCPVALML 209
               L+  G NE       W+ +LP  L                     L  S C +  + 
Sbjct: 857  RTRLFPEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRSEQLTFLNVSGCKLEKLW 916

Query: 210  PSLTGVCSLTKLDLSDC-------GLGEA---------------AIPSDIDNLHSLKELY 247
              +  + SL ++DLS+         L +A                +PS I NL +L+ LY
Sbjct: 917  EGIQSLGSLEEMDLSESENLKELPDLSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRRLY 976

Query: 248  LNR-NNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQ--FVRANGCSSLVTLFGA 304
            +NR      LP  ++ L +LE L+L  C  L++ P I  N+   ++       +  L  A
Sbjct: 977  MNRCTGLEVLPTDVN-LSSLETLDLSGCSSLRTFPLISTNIVCLYLENTAIEEIPDLSKA 1035

Query: 305  LKL-------CRSKYTIINCIDSLKLLRK 326
             KL       C+S  T+ + I +L+ LR+
Sbjct: 1036 TKLESLILNNCKSLVTLPSTIGNLQNLRR 1064



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 30/197 (15%)

Query: 652  EEADEFPDIVQVLSDGTDIRELSLA-----------IELLFGLVQLTLNGCKNLERLPRT 700
            E   E PD    LS  T+++ L L+           I  L  L +L +N C  LE LP  
Sbjct: 934  ENLKELPD----LSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTD 989

Query: 701  ISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLP--ASIELLSGNILSN 758
            ++ L  L TL+LSG S  R FP I+++   ++ ++LE TAI  +P  +    L   IL+N
Sbjct: 990  VN-LSSLETLDLSGCSSLRTFPLISTN---IVCLYLENTAIEEIPDLSKATKLESLILNN 1045

Query: 759  LKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE--TLGKVESLEVRLSSWNR--PKM 814
               CK+L +LPSTI  L++LR +Y + C+ L+ +     L  +E+L++   S  R  P +
Sbjct: 1046 ---CKSLVTLPSTIGNLQNLRRLYMNRCTGLELLPTDVNLSSLETLDLSGCSSLRTFPLI 1102

Query: 815  QNDFDC--VEQSAVETV 829
                +C  +E +A+E V
Sbjct: 1103 STRIECLYLENTAIEEV 1119



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 11/160 (6%)

Query: 655  DEFPDIVQ-------VLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYL 707
            +E PD+ +       +L++   +  L   I  L  L +L +N C  LE LP  ++ L  L
Sbjct: 1027 EEIPDLSKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMNRCTGLELLPTDVN-LSSL 1085

Query: 708  STLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKS 767
             TL+LSG S  R FP I++  + L   +LE TAI  +P  IE  +   +  +  C+ LK+
Sbjct: 1086 ETLDLSGCSSLRTFPLISTRIECL---YLENTAIEEVPCCIEDFTRLTVLRMYCCQRLKN 1142

Query: 768  LPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLS 807
            +   I  L SL +   + C  +         V ++E  +S
Sbjct: 1143 ISPNIFRLTSLTLADFTDCRGVIKALSDATVVATMEDHVS 1182



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 31/159 (19%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            L  L ++GCK LE+L   I +L  L  ++LS     +E P+++ +               
Sbjct: 902  LTFLNVSGCK-LEKLWEGIQSLGSLEEMDLSESENLKELPDLSKA--------------- 945

Query: 743  GLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTE--TLGKVE 800
                +++LL       L  CK+L +LPSTI  L++LR +Y + C+ L+ +     L  +E
Sbjct: 946  ---TNLKLLC------LSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDVNLSSLE 996

Query: 801  SLEVRLSSWNR--PKMQNDFDC--VEQSAVETVTKLAKA 835
            +L++   S  R  P +  +  C  +E +A+E +  L+KA
Sbjct: 997  TLDLSGCSSLRTFPLISTNIVCLYLENTAIEEIPDLSKA 1035



 Score = 43.1 bits (100), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 3/99 (3%)

Query: 694 LERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLS 752
           LE+L     +L  L  +NL   +  +E P+++ + + L E+ L G  ++  LP+SI+  +
Sbjct: 746 LEKLWDGTQSLGSLKEMNLRYSNNLKEIPDLSLAIN-LEELDLFGCVSLVTLPSSIQNAT 804

Query: 753 GNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKN 791
             I  ++ +C+NL+S P+  N L+SL  +  +GC  L+N
Sbjct: 805 KLIYLDMSECENLESFPTVFN-LKSLEYLDLTGCPNLRN 842



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 29/134 (21%)

Query: 1    MASMKDLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            + ++++L  LY++  T +  +P+ + L + LE L L GC +L + P+  + ++C      
Sbjct: 1056 IGNLQNLRRLYMNRCTGLELLPTDVNL-SSLETLDLSGCSSLRTFPLISTRIEC------ 1108

Query: 60   SGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSI 119
                                 LYL+ T+I EVP  IE    L +L +  C+ L  +  +I
Sbjct: 1109 ---------------------LYLENTAIEEVPCCIEDFTRLTVLRMYCCQRLKNISPNI 1147

Query: 120  NGLKSLKTLNLSGC 133
              L SL   + + C
Sbjct: 1148 FRLTSLTLADFTDC 1161



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 10   LYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKF- 68
            LYL+ T+I EVP  IE  T L +L +  C+ L ++   I  L  L   + + C  + K  
Sbjct: 1109 LYLENTAIEEVPCCIEDFTRLTVLRMYCCQRLKNISPNIFRLTSLTLADFTDCRGVIKAL 1168

Query: 69   --PQIVASMED 77
                +VA+MED
Sbjct: 1169 SDATVVATMED 1179


>gi|357499615|ref|XP_003620096.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495111|gb|AES76314.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1104

 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 159/408 (38%), Gaps = 75/408 (18%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           M    ++ +L LD          +  L  LE+ + + CKNL  +  ++  L  L+ L   
Sbjct: 636 MKRFGNVRELNLDDCQYLTRIHDVSNLPNLEIFSFQFCKNLIEIHESVGFLNKLQILNAV 695

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
            CSKL+ FP + ++                          L  L L  C +L   P  + 
Sbjct: 696 NCSKLRSFPAMKSA-------------------------SLRRLGLAYCTSLKTFPEILG 730

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            +K++  ++L     ++ +P +   +  L+   + G  ++R  SSIF M NL  + F  C
Sbjct: 731 EMKNITHISLMKT-SIDKLPVSFQNLTGLQIFFIEGNVVQRLPSSIFRMPNLSKITFYRC 789

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
             P     W   +       S+ P              T + L  C L +  +P  +   
Sbjct: 790 IFPKLDDKWSSMV-------STSP--------------TDIQLVKCNLSDEFLPIVVMWS 828

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVT 300
            +++ L L+ NNF  LP  I     L  L L+DCK L+ +  IPPNL+ + A  C SL +
Sbjct: 829 ANVEFLNLSENNFTILPECIKDCRFLWSLRLDDCKCLREIRGIPPNLKHLSAIRCKSLTS 888

Query: 301 L------------FGALKLCRSKYTII-NCID------SLKLLRKNGLAISMLREYLELQ 341
                         G  K C S +  I +  D      ++    +N L  SM   +    
Sbjct: 889 SCKNMLLNQELHEAGGTKFCFSGFARIPDWFDHQSMGHTISFWFRNKLP-SMALCFSTKS 947

Query: 342 AVSDPGHKLSIVFPGSQIPKWFMYQN-----EGSSITVTRPSYLYNVN 384
           A + P  K +       IP  F+  N     + S I  T  +YLY++N
Sbjct: 948 AATMPTGKTNFYI---TIPTLFINGNKYDRLDMSGIMSTHHTYLYDIN 992


>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 875

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 126/257 (49%), Gaps = 33/257 (12%)

Query: 31  ELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAE 90
           E L L G +NL+ +P  I  L  L+ L LS  +++ + P+ +A +  L +LYL    I E
Sbjct: 19  EKLDLSG-RNLTEIPPEIPHLTSLQELNLSN-NQISEIPEALAQLTSLQRLYLKNNQIRE 76

Query: 91  VPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLE 150
           +P ++  L  L++LYLN  + +  +P ++  L SL+ L+LS   ++  +P  L  + SL+
Sbjct: 77  IPEALTHLTSLQVLYLNNNQ-ISEIPEALAQLTSLQRLDLSDN-QIREIPKALAHLTSLQ 134

Query: 151 ELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLP 210
           ELD+S   IR    ++  + +L  L+ +                          +  +  
Sbjct: 135 ELDLSDNQIREIPEALAHLTSLELLFLNNNQ-----------------------IKEIPE 171

Query: 211 SLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELE 270
           +L  + SL  L LS+  + E  IP  +  L SL+ L+L  N    +P +++ L+NL+ L 
Sbjct: 172 ALAHLTSLQVLYLSNNQIRE--IPEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLV 229

Query: 271 LEDCKRLQSLPQIPPNL 287
           L++      +  +PP +
Sbjct: 230 LQN----NPITNVPPEI 242



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 7/187 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +A +  L  LYL    I E+P ++  LT L++L L   + +S +P  ++ L  L+ L+LS
Sbjct: 58  LAQLTSLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQ-ISEIPEALAQLTSLQRLDLS 116

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +++++ P+ +A +  L +L L    I E+P ++  L  LELL+LN  + +  +P ++ 
Sbjct: 117 D-NQIREIPKALAHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQ-IKEIPEALA 174

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            L SL+ L LS   ++  +P+ L ++ SL+ L +    IR    ++  + NL+ L     
Sbjct: 175 HLTSLQVLYLSN-NQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLVLQNN 233

Query: 180 --CNEPP 184
              N PP
Sbjct: 234 PITNVPP 240


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 15/286 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + +++ L DL +    +  +P  I  L  L+ L L     L++LP  I  L+ L+ L + 
Sbjct: 172 IGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRL-AYNQLTTLPKEIGRLENLQDLNIF 230

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ + ++++L  L L    +  +P  I  L  LE LYL   + L  LP  I 
Sbjct: 231 N-NQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQ-LATLPQEIG 288

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSL---YF 177
            L+ L+ L L+   +L+++P  +GK+++L+EL +    +      I  + NL+ L   Y 
Sbjct: 289 KLQKLEWLGLTNN-QLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYN 347

Query: 178 SGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEAAIPSD 236
                P    + H  LP+  L  +       LP   G +  L  L+L +  L  A +P +
Sbjct: 348 RFTTLPEEIGTLH-RLPWLNLEHNQLTT---LPQEIGRLERLEWLNLYNNRL--ATLPKE 401

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
           I  L  L+ LYL  N   TLP  I  L NL++L+L D  +L +LP+
Sbjct: 402 IGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSD-NQLVTLPE 446



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 10/264 (3%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           + ++++L  L L    +  +P  I  L  LE L L   + L++LP  I  L+ L  L L+
Sbjct: 241 IGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQ-LATLPQEIGKLQKLEWLGLT 299

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++LK  PQ +  +++L +L L+   +   P  I  L  L+ L+L E      LP  I 
Sbjct: 300 N-NQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHL-EYNRFTTLPEEIG 357

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L  L  LNL    +L  +P  +G++E LE L++    +      I  ++ L+ LY +  
Sbjct: 358 TLHRLPWLNLEHN-QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLA-- 414

Query: 181 NEPPASASWHLHLPFNL--LGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           N   A+    +    NL  L  S   +  +   +  +  L  L L +  L    +  +I 
Sbjct: 415 NNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQL--RTLSQEIG 472

Query: 239 NLHSLKELYLNRNNFVTLPASISG 262
            L +LK+L L+ N F T P  I G
Sbjct: 473 QLQNLKDLDLSGNPFTTFPQEIVG 496



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 50/274 (18%)

Query: 54  LRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNE----- 108
           +R L+L   ++L  FP+ + ++++L  L L    +  +P  IE L  L+ LYL+E     
Sbjct: 40  VRNLDLVN-NQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKT 98

Query: 109 ----------------CKNLVR-LPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEE 151
                            KN +R LPS I  L+SL+ L+L    +L  +P  +G ++ LEE
Sbjct: 99  LPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEH-NQLITLPQEIGTLQDLEE 157

Query: 152 LDVSGTAIRRPTSSIFLMKNLR--SLYFSGCNEPPASAS-----WHLHLPFNLLGKSSCP 204
           L+++   +R  +  I  +++L+  S++ +     P          +L L +N L      
Sbjct: 158 LNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKE 217

Query: 205 VA---------------LMLPSLTGVC-SLTKLDLSDCGLGEAAIPSDIDNLHSLKELYL 248
           +                + LP   G   +L  L+L++  L    +P +I  L  L+ LYL
Sbjct: 218 IGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRL--VTLPKEIGTLQKLEWLYL 275

Query: 249 NRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
             N   TLP  I  L  LE L L +  +L+SLPQ
Sbjct: 276 TNNQLATLPQEIGKLQKLEWLGLTN-NQLKSLPQ 308


>gi|296083369|emb|CBI23258.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 21/208 (10%)

Query: 253 FVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK- 311
            V++PA IS L NL+ L +  C++LQ +P++PP+++ + A  C+SLV+L    ++   + 
Sbjct: 1   MVSIPADISRLSNLKVLLVRQCEQLQKIPKLPPSIKLLDACDCTSLVSLPTPSRIISPQN 60

Query: 312 YTIINCIDSLKLLRKN--GL---AISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQ 366
           + +   +  ++ +  N  GL    ++M  E L  +   + G+  SIV PGS+IPKW  ++
Sbjct: 61  WLVSTWLRPVEFMLWNCSGLYQDHVAMALETLHQELFPEIGY--SIVIPGSRIPKWRWHE 118

Query: 367 NEGSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGH 426
           N G+S++ T P +  + N   G A+C VF + +  T        P  E+ C+ +   EG 
Sbjct: 119 NMGASVSATLPPHWLD-NNFSGVALCAVFALEEGETI-----QRPG-EIRCNFE-CREGP 170

Query: 427 YIYFRGKFGH-----VVSDHLWLLFLPR 449
           Y      + H     V +DH+ +++ PR
Sbjct: 171 YFSHSITWTHSGDRVVETDHVCMMYQPR 198


>gi|215261576|gb|ACJ64856.1| disease resistance protein RPP1-like protein R2 [Arabidopsis
            thaliana]
          Length = 1162

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 150/314 (47%), Gaps = 37/314 (11%)

Query: 1    MASMKDLSDLYL-DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLEL 59
            +++  +L +L L + +S+ E+PSSIE LT L++L L  C +L  LP   ++ K L+ L+L
Sbjct: 731  LSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNTTK-LKKLDL 789

Query: 60   SGCSKLKKFPQIV-------------------ASMEDLSKL----YLDGTSIAEVPSSIE 96
              CS L K P  +                    ++E+ +KL      + +S+ E+P SI 
Sbjct: 790  GKCSSLVKLPPSINANNLQELSLRNCSRVVKLPAIENATKLRELKLRNCSSLIELPLSIG 849

Query: 97   LLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG 156
                L+ L ++ C +LV+LPSSI  + +L+  +L  C  L  +P ++G ++ L EL +S 
Sbjct: 850  TATNLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSIGNLQKLSELLMSE 909

Query: 157  TAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHL-PFNLLGKSSCPVALMLPSLTGV 215
             +      +   +K+L +L  + C +  +      H+    L G +   V L       +
Sbjct: 910  CSKLEALPTNINLKSLYTLDLTDCTQLKSFPEISTHISELRLKGTAIKEVPL------SI 963

Query: 216  CSLTKLDLSDCGLGEA--AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELED 273
             S ++L + +    E+    P  +D    + +L L   +   +P  +  +  L +L L +
Sbjct: 964  TSWSRLAVYEMSYFESLKEFPHALD---IITDLLLVSEDIQEVPPWVKRMSRLRDLRLNN 1020

Query: 274  CKRLQSLPQIPPNL 287
            C  L SLPQ+  +L
Sbjct: 1021 CNNLVSLPQLSDSL 1034



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 145/317 (45%), Gaps = 38/317 (11%)

Query: 13   DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
            D + + E+P+ +   T LE L L+ C +L  LP +I  L  L+ L+L  CS L + P   
Sbjct: 721  DSSYLKELPN-LSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSF- 778

Query: 73   ASMEDLSKLYLDG-TSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLS 131
             +   L KL L   +S+ ++P SI     L+ L L  C  +V+LP+  N  K L+ L L 
Sbjct: 779  GNTTKLKKLDLGKCSSLVKLPPSIN-ANNLQELSLRNCSRVVKLPAIENATK-LRELKLR 836

Query: 132  GCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLMKNLRSLYFSGCNE---PPASA 187
             C  L  +P ++G   +L++L++SG +++ +  SSI  M NL       C+     P+S 
Sbjct: 837  NCSSLIELPLSIGTATNLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSI 896

Query: 188  SWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELY 247
                 L   L+  S C     LP+   + SL  LDL+DC      + S  +    + EL 
Sbjct: 897  GNLQKLSELLM--SECSKLEALPTNINLKSLYTLDLTDC----TQLKSFPEISTHISELR 950

Query: 248  LNRNNFVTLPASISGLLNLEELELEDCKRLQSLP-----------------QIPP----- 285
            L       +P SI+    L   E+   + L+  P                 ++PP     
Sbjct: 951  LKGTAIKEVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRM 1010

Query: 286  -NLQFVRANGCSSLVTL 301
              L+ +R N C++LV+L
Sbjct: 1011 SRLRDLRLNNCNNLVSL 1027



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 10/224 (4%)

Query: 63  SKLKKFPQIVASMEDLSKLYL-DGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSING 121
           S L+K  +    + +L  + L D + + E+P+ +     LE L L  C +LV LPSSI  
Sbjct: 699 SNLRKLWEGTKQLRNLKWMDLSDSSYLKELPN-LSTATNLEELKLRNCSSLVELPSSIEK 757

Query: 122 LKSLKTLNLSGCCKLENVPDTLGKVESLEELDVS--GTAIRRPTSSIFLMKNLRSLYFSG 179
           L SL+ L+L  C  L  +P + G    L++LD+    + ++ P S      NL+ L    
Sbjct: 758 LTSLQILDLHSCSSLVELP-SFGNTTKLKKLDLGKCSSLVKLPPS--INANNLQELSLRN 814

Query: 180 CNEPPASASWHLHLPFNLLGKSSCPVALMLP-SLTGVCSLTKLDLSDCGLGEAAIPSDID 238
           C+      +         L   +C   + LP S+    +L KL++S C      +PS I 
Sbjct: 815 CSRVVKLPAIENATKLRELKLRNCSSLIELPLSIGTATNLKKLNISGCS-SLVKLPSSIG 873

Query: 239 NLHSLKELYL-NRNNFVTLPASISGLLNLEELELEDCKRLQSLP 281
           ++ +L+   L N ++ VTLP+SI  L  L EL + +C +L++LP
Sbjct: 874 DMTNLEVFDLDNCSSLVTLPSSIGNLQKLSELLMSECSKLEALP 917



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 5/124 (4%)

Query: 6    DLSDLY-LDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  LY LD T  T++ S  E+ T +  L LKG   +  +P++I+S   L   E+S    
Sbjct: 921  NLKSLYTLDLTDCTQLKSFPEISTHISELRLKGTA-IKEVPLSITSWSRLAVYEMSYFES 979

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            LK+FP    +++ ++ L L    I EVP  ++ +  L  L LN C NLV LP   + L +
Sbjct: 980  LKEFPH---ALDIITDLLLVSEDIQEVPPWVKRMSRLRDLRLNNCNNLVSLPQLSDSLDN 1036

Query: 125  LKTL 128
               L
Sbjct: 1037 YAML 1040



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 30/171 (17%)

Query: 666 DGTDIRELSL----------AIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGL 715
           +  +++ELSL          AIE    L +L L  C +L  LP +I     L  LN+SG 
Sbjct: 803 NANNLQELSLRNCSRVVKLPAIENATKLRELKLRNCSSLIELPLSIGTATNLKKLNISGC 862

Query: 716 SKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNI--LSNL--KDCKNLKSLPS 770
           S   + P        L    L+  +++  LP+SI    GN+  LS L   +C  L++LP+
Sbjct: 863 SSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSI----GNLQKLSELLMSECSKLEALPT 918

Query: 771 TINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVR----------LSSWNR 811
            IN L+SL  +  + C++LK+  E    +  L ++          ++SW+R
Sbjct: 919 NIN-LKSLYTLDLTDCTQLKSFPEISTHISELRLKGTAIKEVPLSITSWSR 968



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 50/175 (28%)

Query: 683  LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEGTAIR 742
            L +L ++ C  LE LP  I+ LK L TL+L+  ++ + FPEI++    + E+ L+GTAI+
Sbjct: 902  LSELLMSECSKLEALPTNIN-LKSLYTLDLTDCTQLKSFPEIST---HISELRLKGTAIK 957

Query: 743  GLPASIE------------------------------LLSGNI---------LSNLKD-- 761
             +P SI                               L+S +I         +S L+D  
Sbjct: 958  EVPLSITSWSRLAVYEMSYFESLKEFPHALDIITDLLLVSEDIQEVPPWVKRMSRLRDLR 1017

Query: 762  ---CKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESLEVRLSSWNRPK 813
               C NL SLP   + L +  M+  +      N   T G  +SL+++L   + P+
Sbjct: 1018 LNNCNNLVSLPQLSDSLDNYAMLPGTQVPACFNYRATSG--DSLKIKLKESSLPR 1070



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 26/183 (14%)

Query: 646 NCSRLWEEADEFPDIVQV-LSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISAL 704
           N  +LWE   +  ++  + LSD + ++EL   +     L +L L  C +L  LP +I  L
Sbjct: 700 NLRKLWEGTKQLRNLKWMDLSDSSYLKELP-NLSTATNLEELKLRNCSSLVELPSSIEKL 758

Query: 705 KYLSTLNLSGLSKFREFPEITSSRDQLLEIHL-EGTAIRGLPASIELLSGNILS------ 757
             L  L+L   S   E P   ++  +L ++ L + +++  LP SI   +   LS      
Sbjct: 759 TSLQILDLHSCSSLVELPSFGNT-TKLKKLDLGKCSSLVKLPPSINANNLQELSLRNCSR 817

Query: 758 ----------------NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVES 801
                            L++C +L  LP +I    +L+ +  SGCS L  +  ++G + +
Sbjct: 818 VVKLPAIENATKLRELKLRNCSSLIELPLSIGTATNLKKLNISGCSSLVKLPSSIGDMTN 877

Query: 802 LEV 804
           LEV
Sbjct: 878 LEV 880



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 14/165 (8%)

Query: 646 NCSRLWEEADEFPDIVQVLSDGT--DIRELSLAIEL-LFG----LVQLTLNGCKNLERLP 698
           NCS L E     P  ++ L+     D+   S  +EL  FG    L +L L  C +L +LP
Sbjct: 744 NCSSLVE----LPSSIEKLTSLQILDLHSCSSLVELPSFGNTTKLKKLDLGKCSSLVKLP 799

Query: 699 RTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAIRGLPASIELLSGNILS 757
            +I+A   L  L+L   S+  + P I ++  +L E+ L   +++  LP SI   +     
Sbjct: 800 PSINA-NNLQELSLRNCSRVVKLPAIENA-TKLRELKLRNCSSLIELPLSIGTATNLKKL 857

Query: 758 NLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
           N+  C +L  LPS+I  + +L +     CS L  +  ++G ++ L
Sbjct: 858 NISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLPSSIGNLQKL 902


>gi|297804202|ref|XP_002869985.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315821|gb|EFH46244.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1122

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 5/136 (3%)

Query: 6    DLSDLYLDG-TSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSK 64
            +L  + L+G TS+ +V +SI  L  L  L +K C  L +LP ++ +L  L+ L  SGCS+
Sbjct: 979  NLEHIDLEGCTSLIDVSTSIRHLGKLVSLNMKDCSRLQTLP-SMVNLTSLKRLNFSGCSE 1037

Query: 65   LKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKS 124
            L +      ++E+L   YL GT+I E+P SIE L  L  L L  C+ L +LP  I+ LKS
Sbjct: 1038 LDEIQDFAPNLEEL---YLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKS 1094

Query: 125  LKTLNLSGCCKLENVP 140
            +  L LSGC  L++ P
Sbjct: 1095 IVELKLSGCTSLQSFP 1110



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)

Query: 668  TDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSS 727
            T + ++S +I  L  LV L +  C  L+ LP  ++ L  L  LN SG S   E  EI   
Sbjct: 989  TSLIDVSTSIRHLGKLVSLNMKDCSRLQTLPSMVN-LTSLKRLNFSGCS---ELDEIQDF 1044

Query: 728  RDQLLEIHLEGTAIRGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCS 787
               L E++L GTAIR +P SIE L+  +  +L++C+ L+ LP  I+ L+S+  +  SGC+
Sbjct: 1045 APNLEELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIVELKLSGCT 1104

Query: 788  KLKN 791
             L++
Sbjct: 1105 SLQS 1108



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 48/68 (70%)

Query: 6    DLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKL 65
            +L +LYL GT+I E+P SIE LT L  L L+ C+ L  LP+ ISSLK +  L+LSGC+ L
Sbjct: 1047 NLEELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKSIVELKLSGCTSL 1106

Query: 66   KKFPQIVA 73
            + FP++ A
Sbjct: 1107 QSFPKLKA 1114



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%)

Query: 647  CSRLWEEADEFPDIVQVLSDGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKY 706
            CS L E  D  P++ ++   GT IRE+ L+IE L  LV L L  C+ L++LP  IS+LK 
Sbjct: 1035 CSELDEIQDFAPNLEELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGISSLKS 1094

Query: 707  LSTLNLSGLSKFREFPEITS 726
            +  L LSG +  + FP++ +
Sbjct: 1095 IVELKLSGCTSLQSFPKLKA 1114



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 40/196 (20%)

Query: 111  NLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSG-TAIRRPTSSIFLM 169
            N+ +L      L+ LK + LS   KL ++   L +  +LE +D+ G T++   ++SI  +
Sbjct: 943  NMEKLWEGKKNLEKLKNIKLSHSRKLTDIL-MLSEALNLEHIDLEGCTSLIDVSTSIRHL 1001

Query: 170  KNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLG 229
              L SL    C+                           LPS+  + SL +L+ S C   
Sbjct: 1002 GKLVSLNMKDCSRLQT-----------------------LPSMVNLTSLKRLNFSGC--- 1035

Query: 230  EAAIPSDIDNLH----SLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPP 285
                 S++D +     +L+ELYL       +P SI  L  L  L+LE+C+RLQ LP    
Sbjct: 1036 -----SELDEIQDFAPNLEELYLAGTAIREIPLSIENLTELVTLDLENCRRLQKLPMGIS 1090

Query: 286  NLQFV---RANGCSSL 298
            +L+ +   + +GC+SL
Sbjct: 1091 SLKSIVELKLSGCTSL 1106


>gi|357513735|ref|XP_003627156.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521178|gb|AET01632.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1473

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 120/505 (23%), Positives = 206/505 (40%), Gaps = 90/505 (17%)

Query: 28   TGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDG-T 86
            + L+ + L GC++L  L  ++     L TL L  C+K+++  +    +  L K+ +DG  
Sbjct: 631  SSLKWVNLSGCESLVDLHPSVLCADTLVTLILDRCTKVRRV-RGEKHLNFLEKISVDGCK 689

Query: 87   SIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKV 146
            S+ E   S +L+  L+L        +  L  SI  L+ LK LNL    +L  +P  L  V
Sbjct: 690  SLEEFAVSSDLIENLDL----SSTGIKTLDLSIGRLQKLKQLNLESL-RLNRIPKELSSV 744

Query: 147  ESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVA 206
             S+ EL +SG+ +      I   K L  L+                              
Sbjct: 745  RSIRELKISGSRL------IVEKKQLHELF------------------------------ 768

Query: 207  LMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNL 266
                   G+ SL  L + D  + +  +P+++     L EL L+ +N   LP SI  L  L
Sbjct: 769  ------DGLQSLQILHMKDF-INQFELPNNVHVASKLMELNLDGSNMKMLPQSIKKLEEL 821

Query: 267  EELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSKYTIINCIDSLKLLRK 326
            E L L +C++L+ +P++PP +  + A  C+SLV++    KL          I     L  
Sbjct: 822  EILSLVNCRKLECIPELPPLITLLNAVNCTSLVSVSNLKKLATKMIGKTKHISFSNSLNL 881

Query: 327  NGLAISMLREYLELQAVSDPGHKLSI-----------------VFPGSQIPKWFM-YQNE 368
            +G ++ ++ E L L  +S   H +S+                    G+ IP+ F      
Sbjct: 882  DGHSLGLIMESLNLTMMSAVFHNVSVRRLRVAVRSYNYNSVDACQLGTSIPRLFQCLTAS 941

Query: 369  GSSITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEG-HY 427
             SSIT+T    L + + ++GF    V      S             ++C  +   EG   
Sbjct: 942  DSSITIT---LLPDRSNLLGFIYSVVL-----SPAGGNGMKGGGARIKCQCNLGEEGIKA 993

Query: 428  IYFRGKFGHVVSDHLWLLFLPRHGHN----WQ----FESNLIRLSFRSISDPTWKVKRCG 479
             +       + SDH+++ + P H  +    +Q    FE  +   + R + D +  +K CG
Sbjct: 994  TWLNTDVTELNSDHVYVWYDPFHCDSILKFYQPEICFEFYVTNDTGREV-DGSVGIKECG 1052

Query: 480  FHPIYMHEVE----EFDETTKQSTR 500
               + + E+E    E D   K+  +
Sbjct: 1053 VRLVSVQELESVLPELDSQKKEELK 1077



 Score = 39.7 bits (91), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 39/179 (21%)

Query: 659 DIVQVLS-DGTDIRELSLAIELLFGLVQLTLNGCKNLERLPRTISALKYLSTLNLSG--- 714
           D+++ L    T I+ L L+I  L  L QL L   + L R+P+ +S+++ +  L +SG   
Sbjct: 699 DLIENLDLSSTGIKTLDLSIGRLQKLKQLNLESLR-LNRIPKELSSVRSIRELKISGSRL 757

Query: 715 -------------------------LSKFREFPEITSSRDQLLEIHLEGTAIRGLPASIE 749
                                    +++F E P       +L+E++L+G+ ++ LP SI+
Sbjct: 758 IVEKKQLHELFDGLQSLQILHMKDFINQF-ELPNNVHVASKLMELNLDGSNMKMLPQSIK 816

Query: 750 LLSGNILSNLKDCKNLKSLP------STINGLRSLRMMYPSGCSKLKNVTETLGKVESL 802
            L    + +L +C+ L+ +P      + +N +    ++  S   KL   T+ +GK + +
Sbjct: 817 KLEELEILSLVNCRKLECIPELPPLITLLNAVNCTSLVSVSNLKKL--ATKMIGKTKHI 873


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 37/279 (13%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +   I  L  L++L L   + L++LP  I  LK L+TL L 
Sbjct: 113 IEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQ-LTTLPKEIEQLKNLQTLGL- 170

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYL--NECKNLVRLPSS 118
           G +++K  P  +  +++L KLYLD   I  +P  I  L  L+ L L  N+ K    LP  
Sbjct: 171 GNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLK---TLPKE 227

Query: 119 INGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLR--SLY 176
           I  LK+L+TL+L G  +L  +P+ + ++++L+ LD+    +      I  ++NL+  SLY
Sbjct: 228 IEQLKNLQTLHL-GSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLY 286

Query: 177 FSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSD 236
           ++     P                              + +L  LDL +  L    +P +
Sbjct: 287 YNQLTALPKEIG-------------------------QLQNLKSLDLRNNQL--TTLPIE 319

Query: 237 IDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCK 275
           I  L +LK L L  N   TLP  I  L NL+ L+L + +
Sbjct: 320 IGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQ 358



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 4/179 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L +L L    +  +P  IE L  L+ L L G   L++LP  I  LK L+TL+L 
Sbjct: 205 IGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHL-GSNQLTTLPNEIEQLKNLQTLDLY 263

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   PQ +  +++L +L L    +  +P  I  L  L+ L L   + L  LP  I 
Sbjct: 264 -YNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQ-LTTLPIEIG 321

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG 179
            L++LK+L+L    +L  +P  +G++++L+ LD+    +      I  +KNL+ LY + 
Sbjct: 322 QLQNLKSLDLRNN-QLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNN 379



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 34/278 (12%)

Query: 38  CKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIEL 97
            + L++LP  I  L+ L++L+L+  ++ K  P+ +  +++L +L L    +  +P  IE 
Sbjct: 57  SQKLTTLPKEIKQLQNLKSLDLAN-NQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIEQ 115

Query: 98  LPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGT 157
           L  L+ L L     L  L   I  L++LK L L+   +L  +P  + ++++L+ L +   
Sbjct: 116 LKNLQTLGLG-YNQLTTLSQEIGQLQNLKVLFLNNN-QLTTLPKEIEQLKNLQTLGLGNN 173

Query: 158 AIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCS 217
            I+   + I+ ++NL+ LY                L +N +   + P       +  + +
Sbjct: 174 QIKIIPNGIWQLQNLQKLY----------------LDYNQI--KTIP-----KEIGQLQN 210

Query: 218 LTKLDLSDCGLGEAAIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRL 277
           L +L+L +  L    +P +I+ L +L+ L+L  N   TLP  I  L NL+ L+L    +L
Sbjct: 211 LQELNLWNNQL--KTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLY-YNQL 267

Query: 278 QSLPQIPPNLQFVRA-----NGCSSLVTLFGALKLCRS 310
            +LPQ    LQ ++      N  ++L    G L+  +S
Sbjct: 268 TTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKS 305


>gi|39104607|dbj|BAC43641.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 200/471 (42%), Gaps = 70/471 (14%)

Query: 13  DGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELSGCSKLKKFPQIV 72
           DG +   VP  ++    L LL  K   +  SLP T +  + L  L +   S+L+   Q  
Sbjct: 569 DGNNRMHVPEEMDFPCLLRLLDWKAYPS-KSLPPTFNP-EHLVELNMHS-SQLEYLWQGT 625

Query: 73  ASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSINGLKSLKTLNLSG 132
             +++L K+ L  +   +    +     LE LYL  C++L+ +PSSI+ L  L+ L   G
Sbjct: 626 QPLKNLKKMDLSQSKNLKQLPDLSNATNLEYLYLMGCESLIEIPSSISHLHKLEMLATVG 685

Query: 133 CCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGCNEPPASASWHLH 192
           C  LE +P  +  +ESL+ + + G +  R  +   +  N+R L+ +              
Sbjct: 686 CINLEVIPAHMN-LESLQTVYLGGCS--RLRNIPVMSTNIRYLFITNT------------ 730

Query: 193 LPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL-HSLKELYLNRN 251
               + G   CP             L  LD+S    G       + +L  SL  L L   
Sbjct: 731 ---AVEGVPLCP------------GLKTLDVS----GSRNFKGLLTHLPTSLTTLNLCYT 771

Query: 252 NFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRANGCSSLVTLFGALKLCRSK 311
           +   +P     L  L+ + L  C+RL SLP++P +L  + A+ C SL T+F  L   ++ 
Sbjct: 772 DIERIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDCESLETVFCPLNTLKAS 831

Query: 312 YTIINCIDSLKLLRKNGLAISMLREYLELQAVSDPGHKLSIVFPGSQIPKWFMYQNEGSS 371
           ++  NC    KL R+   AI + + +   +A          V PG ++P  F ++ +G S
Sbjct: 832 FSFANC---FKLDREARRAI-IQQSFFMGKA----------VLPGREVPAVFDHRAKGYS 877

Query: 372 ITVTRPSYLYNVNKVVGFAICCVFQVPKHSTGTYLFHSYPAHELECSMDGSGEGHYIYFR 431
           +T+ RP    + N    F  C V    + S  T      P   L   +    EG+ +   
Sbjct: 878 LTI-RP----DGNPYTSFVFCVVVSRNQKSDKT-----IPPSLLWRRIIAQDEGYPVEVW 927

Query: 432 GKFGHVV---SDHLWLLFLPRHGHNWQFESNLIRLSFRSISDPTWKVKRCG 479
            + G V    ++HL L+F   H    +F++  I   F S S   + +  CG
Sbjct: 928 NRIGDVFKYRTEHL-LIF---HFDFLEFDNRDIVFEFSSESH-DFDIIECG 973



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 64/111 (57%), Gaps = 4/111 (3%)

Query: 683 LVQLTLNGCKNLERLPRTISALKYLSTLNLSGLSKFREFPEITSSRDQLLEIHLEG-TAI 741
           LV+L ++  + LE L +    LK L  ++LS     ++ P+++++ + L  ++L G  ++
Sbjct: 608 LVELNMHSSQ-LEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATN-LEYLYLMGCESL 665

Query: 742 RGLPASIELLSGNILSNLKDCKNLKSLPSTINGLRSLRMMYPSGCSKLKNV 792
             +P+SI  L    +     C NL+ +P+ +N L SL+ +Y  GCS+L+N+
Sbjct: 666 IEIPSSISHLHKLEMLATVGCINLEVIPAHMN-LESLQTVYLGGCSRLRNI 715


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 25/291 (8%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L   S+T +P  I  L  L+ L L    +L++LP  +  L+ L+ L L+
Sbjct: 67  IGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDL-SFNSLTTLPKEVGQLENLQRLNLN 125

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
              KL   P+ +  +++L  L L    +  +P  I  L  L++L+LN  + L  LP+ I 
Sbjct: 126 S-QKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQ-LTTLPTEIR 183

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSG- 179
            LK+L+ L+L G  +L  +P  +G++++L+EL +S   +      I  ++NL+ L  +  
Sbjct: 184 QLKNLQMLDL-GNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQ 242

Query: 180 --CNEPPA-----SASWHLHLPFNLLGKSSCPVALMLPSLTG-VCSLTKLDLSDCGLGEA 231
                P       +  W L L FN L          LP   G + +L +LDL    L  A
Sbjct: 243 KLTTLPKEIGQLRNLQW-LDLSFNSLT--------TLPKEVGQLENLQRLDLHQNRL--A 291

Query: 232 AIPSDIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +P +I  L +L+EL LN N   TLP  I  L NL+EL+L    +L +LP+
Sbjct: 292 TLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHR-NQLTTLPK 341



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 17/297 (5%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L   S+T +P  +  L  L+ L L   + L++LP+ I  LK L+ L+L+
Sbjct: 251 IGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNR-LATLPMEIGQLKNLQELDLN 309

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             +KL   P+ +  + +L +L L    +  +P  I  L  L+ L L     L  LP  I 
Sbjct: 310 S-NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNL-IVTQLTTLPKEIG 367

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYF--S 178
            L++LKTLNL    +L  +P  +G++++L+ L++  T +      I  ++NL++L    +
Sbjct: 368 ELQNLKTLNLI-VTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 426

Query: 179 GCNEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGE---AAIPS 235
                P       +L   +L ++       LP   G       +L   GL +     +P 
Sbjct: 427 QLTTLPKEIGELQNLEILVLRENRITA---LPKEIGQLQ----NLQWLGLHQNQLTTLPK 479

Query: 236 DIDNLHSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQIPPNLQFVRA 292
           +I  L +L+ L L++N   TLP  I  L NL+EL L D  +L +LP+    LQ +R 
Sbjct: 480 EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCL-DENQLTTLPKEIEQLQNLRV 535



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 30/282 (10%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +K+L  L L    +T +P  I  L  L++L L   + L++LP  I  LK L+ L+L 
Sbjct: 136 IGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQ-LTTLPTEIRQLKNLQMLDL- 193

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
           G ++L   P+ +  +++L +LYL    +  +P  I  L  L+ L LN  K L  LP  I 
Sbjct: 194 GNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQK-LTTLPKEIG 252

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+LS    L  +P  +G++E+L+ LD+    +      I  +KNL+ L  +  
Sbjct: 253 QLRNLQWLDLS-FNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLN-- 309

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                                S  +  +   +  + +L +LDL    L    +P +I  L
Sbjct: 310 ---------------------SNKLTTLPKEIRQLRNLQELDLHRNQL--TTLPKEIGQL 346

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEELELEDCKRLQSLPQ 282
            +LK L L      TLP  I  L NL+ L L    +L +LP+
Sbjct: 347 QNLKTLNLIVTQLTTLPKEIGELQNLKTLNL-IVTQLTTLPK 387



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 8/272 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L  T +T +P  I  L  L+ L L   + L++LP  I  L+ L+TL L 
Sbjct: 366 IGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQ-LTTLPKEIGELQNLKTLNLL 424

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    I  +P  I  L  L+ L L++ + L  LP  I 
Sbjct: 425 D-NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQ-LTTLPKEIG 482

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L+L    +L  +P  +G++++L+EL +    +      I  ++NLR L     
Sbjct: 483 QLQNLQRLDLHQN-QLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDN- 540

Query: 181 NEPPASASWHLHLP-FNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDN 239
           N+        L L    +L   S  ++ +   +  + +L  L L    L    +P +I  
Sbjct: 541 NQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQL--MTLPKEIGQ 598

Query: 240 LHSLKELYLNRNNFVTLPASISGLLNLEELEL 271
           L +L+EL L+ N   T P  I  L NL+EL L
Sbjct: 599 LQNLQELCLDENQLTTFPKEIRQLKNLQELHL 630



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 6/269 (2%)

Query: 1   MASMKDLSDLYLDGTSITEVPSSIELLTGLELLTLKGCKNLSSLPVTISSLKCLRTLELS 60
           +  +++L  L L  T +T +P  I  L  L+ L L   + L++LP  I  L+ L+TL L 
Sbjct: 343 IGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQ-LTTLPKEIGELQNLKTLNLI 401

Query: 61  GCSKLKKFPQIVASMEDLSKLYLDGTSIAEVPSSIELLPGLELLYLNECKNLVRLPSSIN 120
             ++L   P+ +  +++L  L L    +  +P  I  L  LE+L L E + +  LP  I 
Sbjct: 402 -VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENR-ITALPKEIG 459

Query: 121 GLKSLKTLNLSGCCKLENVPDTLGKVESLEELDVSGTAIRRPTSSIFLMKNLRSLYFSGC 180
            L++L+ L L    +L  +P  +G++++L+ LD+    +      I  ++NL+ L     
Sbjct: 460 QLQNLQWLGLHQN-QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 518

Query: 181 NEPPASASWHLHLPFNLLGKSSCPVALMLPSLTGVCSLTKLDLSDCGLGEAAIPSDIDNL 240
                           +L   +  +  +   +  + SL  L L    L  + +P +I  L
Sbjct: 519 QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL--STLPKEIGQL 576

Query: 241 HSLKELYLNRNNFVTLPASISGLLNLEEL 269
            +L+ L L  N  +TLP  I  L NL+EL
Sbjct: 577 QNLQVLGLISNQLMTLPKEIGQLQNLQEL 605


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.134    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,003,839,533
Number of Sequences: 23463169
Number of extensions: 531716089
Number of successful extensions: 1571152
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4638
Number of HSP's successfully gapped in prelim test: 15949
Number of HSP's that attempted gapping in prelim test: 1316294
Number of HSP's gapped (non-prelim): 148393
length of query: 862
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 710
effective length of database: 8,792,793,679
effective search space: 6242883512090
effective search space used: 6242883512090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)