Query         048790
Match_columns 482
No_of_seqs    192 out of 1926
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 13:15:22 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048790.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048790hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.2E-86   7E-91  624.5  43.5  439   33-480    25-482 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 5.2E-82 1.1E-86  586.1  33.8  460   15-482    13-495 (499)
  3 PLN03234 cytochrome P450 83B1; 100.0 3.1E-80 6.7E-85  605.6  44.4  450   31-481    25-494 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0   9E-79 1.9E-83  597.4  43.7  445   30-480    53-528 (543)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 2.7E-78 5.9E-83  592.3  43.5  450   29-481    29-504 (517)
  6 PLN02966 cytochrome P450 83A1  100.0 1.5E-78 3.3E-83  592.5  41.5  451   29-480    24-494 (502)
  7 PLN02183 ferulate 5-hydroxylas 100.0 3.6E-78 7.8E-83  591.3  41.5  443   33-480    35-506 (516)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 2.2E-77 4.9E-82  582.2  44.4  470    5-482     3-493 (504)
  9 PLN03112 cytochrome P450 famil 100.0 8.5E-77 1.8E-81  583.0  43.3  475    1-481     1-503 (514)
 10 PLN00168 Cytochrome P450; Prov 100.0 3.5E-76 7.6E-81  577.7  42.9  449   28-481    29-512 (519)
 11 PLN02394 trans-cinnamate 4-mon 100.0 4.1E-76 8.9E-81  577.1  43.1  443   31-481    27-497 (503)
 12 PTZ00404 cytochrome P450; Prov 100.0   2E-75 4.3E-80  569.2  41.3  434   30-481    25-478 (482)
 13 PLN02290 cytokinin trans-hydro 100.0 7.4E-76 1.6E-80  576.6  35.3  435   32-482    40-511 (516)
 14 PLN02655 ent-kaurene oxidase   100.0 1.4E-74   3E-79  559.3  38.8  433   36-482     1-460 (466)
 15 PLN02500 cytochrome P450 90B1  100.0 4.9E-75 1.1E-79  566.6  34.7  412   29-457    33-468 (490)
 16 KOG0157 Cytochrome P450 CYP4/C 100.0 8.2E-75 1.8E-79  559.2  32.8  435   32-482    33-492 (497)
 17 PLN02774 brassinosteroid-6-oxi 100.0 1.6E-74 3.5E-79  558.4  34.0  450    1-482     1-460 (463)
 18 PLN03018 homomethionine N-hydr 100.0 6.9E-73 1.5E-77  551.3  42.3  447   29-481    35-519 (534)
 19 PLN02196 abscisic acid 8'-hydr 100.0 2.3E-73   5E-78  549.8  34.0  447    3-482     4-459 (463)
 20 PF00067 p450:  Cytochrome P450 100.0 1.1E-73 2.4E-78  559.4  24.4  436   36-481     1-462 (463)
 21 KOG0159 Cytochrome P450 CYP11/ 100.0 6.7E-72 1.4E-76  506.0  30.6  433   31-482    47-514 (519)
 22 PLN03195 fatty acid omega-hydr 100.0 1.3E-71 2.8E-76  546.1  35.0  433   36-482    32-512 (516)
 23 PLN02169 fatty acid (omega-1)- 100.0 1.9E-71 4.2E-76  539.4  35.8  430   36-482    33-496 (500)
 24 PLN03141 3-epi-6-deoxocathaste 100.0 1.5E-71 3.2E-76  536.7  31.4  424   29-481     2-445 (452)
 25 PLN02302 ent-kaurenoic acid ox 100.0 1.7E-70 3.7E-75  537.3  36.5  430   29-481    37-483 (490)
 26 PLN02987 Cytochrome P450, fami 100.0   5E-70 1.1E-74  524.5  34.9  422   30-481    26-464 (472)
 27 PLN02738 carotene beta-ring hy 100.0   8E-70 1.7E-74  535.2  34.8  419   46-481   143-590 (633)
 28 KOG0684 Cytochrome P450 [Secon 100.0 1.9E-69 4.1E-74  477.6  31.0  429   34-481    31-480 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 4.5E-68 9.7E-73  516.1  31.8  429   37-482    15-478 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.5E-65 3.3E-70  497.3  37.8  420   42-482    49-496 (502)
 31 PLN02648 allene oxide synthase 100.0 1.3E-60 2.8E-65  455.4  28.6  402   31-457    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.6E-55 3.5E-60  415.9  28.0  356   57-456    25-387 (411)
 33 PF12508 DUF3714:  Protein of u  67.0     1.2 2.5E-05   37.3  -1.1   43  337-381    52-94  (200)
 34 PF12554 MOZART1:  Mitotic-spin  62.9      26 0.00055   21.6   4.3   43  277-319     5-47  (48)
 35 PF05952 ComX:  Bacillus compet  51.0      16 0.00035   23.4   2.2   19  300-318     4-22  (57)
 36 PF01102 Glycophorin_A:  Glycop  50.4      27 0.00058   26.7   3.7    8   19-26     84-91  (122)
 37 KOG0114 Predicted RNA-binding   47.0      66  0.0014   23.6   5.0   61   32-95     10-76  (124)
 38 PF14129 DUF4296:  Domain of un  45.9 1.1E+02  0.0023   21.8   7.0   49  275-323    30-78  (87)
 39 TIGR00847 ccoS cytochrome oxid  43.6      56  0.0012   20.5   3.7   27    3-29      2-28  (51)
 40 PF10264 Stork_head:  Winged he  42.0      78  0.0017   22.1   4.6   50  295-346    13-64  (80)
 41 KOG3653 Transforming growth fa  41.5 1.2E+02  0.0027   29.3   7.3   37   65-101   221-257 (534)
 42 COG0851 MinE Septum formation   41.3      60  0.0013   23.0   4.0   18  309-326    36-53  (88)
 43 PF14459 Prok-E2_C:  Prokaryoti  41.2       8 0.00017   28.1  -0.2   19  413-431   102-120 (131)
 44 TIGR03779 Bac_Flav_CT_M Bacter  41.0     4.6  0.0001   37.9  -1.8   43  337-381   255-297 (410)
 45 PF09201 SRX:  SRX;  InterPro:   39.4      30 0.00064   26.8   2.5   23  426-448    18-40  (148)
 46 PF05961 Chordopox_A13L:  Chord  38.7      90   0.002   20.7   4.2   20    1-20      1-20  (68)
 47 PRK02302 hypothetical protein;  37.3      75  0.0016   22.7   4.0   35   61-95     20-54  (89)
 48 PRK06789 flagellar motor switc  37.2      29 0.00064   23.7   2.0   40  343-382    21-62  (74)
 49 COG4471 Uncharacterized protei  36.0 1.2E+02  0.0025   21.5   4.7   36   60-95     18-53  (90)
 50 PHA03049 IMV membrane protein;  35.3 1.1E+02  0.0023   20.3   4.1   18    1-18      1-18  (68)
 51 KOG3506 40S ribosomal protein   34.5      18 0.00039   22.7   0.6   11  419-429    12-22  (56)
 52 PRK02886 hypothetical protein;  34.3      91   0.002   22.1   4.0   35   61-95     18-52  (87)
 53 PF13893 RRM_5:  RNA recognitio  32.4 1.2E+02  0.0027   18.8   4.4   35   61-95      2-40  (56)
 54 PF03597 CcoS:  Cytochrome oxid  32.2      96  0.0021   18.9   3.4   24    4-27      2-25  (45)
 55 PF11138 DUF2911:  Protein of u  32.1      46   0.001   26.4   2.6   41  362-403    52-99  (145)
 56 PRK09458 pspB phage shock prot  32.0      91   0.002   21.4   3.6   26    4-29      3-28  (75)
 57 PF10883 DUF2681:  Protein of u  31.5      98  0.0021   22.0   3.9   23    1-23      1-23  (87)
 58 PF15330 SIT:  SHP2-interacting  30.3 1.7E+02  0.0036   21.9   5.2   12   41-52     45-56  (107)
 59 PHA02650 hypothetical protein;  30.1 1.5E+02  0.0031   20.5   4.3   21    9-29     56-76  (81)
 60 PF09926 DUF2158:  Uncharacteri  29.8      50  0.0011   20.9   2.0   18   67-84      3-20  (53)
 61 PRK13991 cell division topolog  29.1 1.3E+02  0.0028   21.4   4.2   19  308-326    35-53  (87)
 62 PF10717 ODV-E18:  Occlusion-de  28.6 1.5E+02  0.0034   20.7   4.3   20    5-24     26-45  (85)
 63 COG2101 SPT15 TATA-box binding  28.4      23 0.00049   28.7   0.4   37  397-433    35-71  (185)
 64 PF09902 DUF2129:  Uncharacteri  28.1 1.4E+02   0.003   20.3   4.0   34   62-95     15-48  (71)
 65 PRK13989 cell division topolog  27.4 1.4E+02  0.0031   21.0   4.2   23  308-330    36-58  (84)
 66 TIGR02976 phageshock_pspB phag  27.2 1.1E+02  0.0025   21.0   3.5   24    5-28      4-27  (75)
 67 PHA03162 hypothetical protein;  25.0      81  0.0018   24.2   2.7   24  422-445     2-25  (135)
 68 PRK13988 cell division topolog  23.9 2.2E+02  0.0047   20.8   4.6   19  308-326    37-55  (97)
 69 PRK13987 cell division topolog  23.7 1.9E+02  0.0041   20.9   4.2   19  308-326    33-51  (91)
 70 PF13625 Helicase_C_3:  Helicas  22.8 1.6E+02  0.0036   22.7   4.3   39   56-96     76-114 (129)
 71 PF14483 Cut8_M:  Cut8 dimerisa  22.8 1.4E+02   0.003   17.4   2.8   16  302-317    19-35  (38)
 72 COG5329 Phosphoinositide polyp  22.5      52  0.0011   32.5   1.7   26   55-80    294-319 (570)
 73 COG3954 PrkB Phosphoribulokina  22.4 2.4E+02  0.0051   23.6   5.1   59  288-350    15-89  (289)
 74 PRK04778 septation ring format  21.7      45 0.00097   33.8   1.1   40   35-76     43-82  (569)
 75 TIGR00589 ogt O-6-methylguanin  21.5 1.9E+02  0.0041   20.2   3.9   61  310-371     2-66  (80)
 76 PF06667 PspB:  Phage shock pro  21.2 1.8E+02  0.0038   20.1   3.5    8   17-24     16-23  (75)
 77 PRK10597 DNA damage-inducible   21.0 2.5E+02  0.0053   19.7   4.3   38   58-95     24-69  (81)
 78 PF02439 Adeno_E3_CR2:  Adenovi  20.8 1.9E+02  0.0041   16.8   3.9   15    3-17      7-21  (38)
 79 PF11227 DUF3025:  Protein of u  20.8      56  0.0012   27.7   1.3   20  384-403   192-211 (212)
 80 KOG3054 Uncharacterized conser  20.6 1.6E+02  0.0034   25.5   3.8   26    1-26      1-26  (299)
 81 PF07849 DUF1641:  Protein of u  20.5 1.2E+02  0.0026   18.0   2.4   21  297-317    11-31  (42)
 82 PF15339 Afaf:  Acrosome format  20.1 1.5E+02  0.0033   23.9   3.4   25    1-25    133-157 (200)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.2e-86  Score=624.51  Aligned_cols=439  Identities=48%  Similarity=0.872  Sum_probs=380.2

Q ss_pred             CCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCc-cchhhh
Q 048790           33 TRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPE-LYAAKI  111 (482)
Q Consensus        33 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~-~~~~~~  111 (482)
                      .+.||||+++|++||++++....++..+.++.++||||+++++|..++|||+|++.++|++.+++..|++|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            7899999999999999999444489999999999999999999999999999999999999999999999997 335566


Q ss_pred             hccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHhh
Q 048790          112 FSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSS-AGPTDLSRLIFLLANNIICRVTF  190 (482)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~d~~~~~~~~~~~~i~~~~f  190 (482)
                      +.+++.++.++++|+.||.+||+.....++...+++....-.++++.+++.+.+.. ++++|+...+..++.++|++++|
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~f  184 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRMLF  184 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHHh
Confidence            77778999999999999999999999999999999988888999999999998622 26899999999999999999999


Q ss_pred             ccccccccc--------------ccCcccee--ecc-ccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Q 048790          191 GRKYDSEAD--------------TGTTGFDI--FFP-WMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPKPE  253 (482)
Q Consensus       191 G~~~~~~~~--------------~~~~~~~~--~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (482)
                      |.+++..++              +....+..  ++| ++.++....+..+........+.+++. +++++++++.+. .+
T Consensus       185 G~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~-~~i~eh~~~~~~-~~  262 (489)
T KOG0156|consen  185 GRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLE-RIIDEHREKIGD-EE  262 (489)
T ss_pred             CCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHH-HHHHHHHhhhcc-CC
Confidence            999986431              12222222  667 555555334556666666667899998 888888765421 22


Q ss_pred             cCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCccccccc
Q 048790          254 HEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREVVEESD  333 (482)
Q Consensus       254 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~  333 (482)
                      .+|++|.++...++...+ .++++++...+.++++||.|||++|+.|++.+|++||++|+|+++||++++|.++.++.+|
T Consensus       263 ~~D~vD~lL~~~~~~~~~-~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D  341 (489)
T KOG0156|consen  263 GRDFVDALLKLMKEEKAE-GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESD  341 (489)
T ss_pred             CCcHHHHHHHhhcccccC-CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhh
Confidence            389999999886654322 2999999999999999999999999999999999999999999999999999888899999


Q ss_pred             cccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCccCCCC
Q 048790          334 ISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSIDLKG  413 (482)
Q Consensus       334 l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~  413 (482)
                      +.+||||+|||+||+|++|++|..++|.+.+|++++||.|||||.|+++.|++||||++|+||++|+||||++++ +.++
T Consensus       342 ~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~  420 (489)
T KOG0156|consen  342 LPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKG  420 (489)
T ss_pred             hccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999974 2233


Q ss_pred             CCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCC
Q 048790          414 NNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLP  480 (482)
Q Consensus       414 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  480 (482)
                      ....++|||.|+|.|||..+|.+++.+++++|+++|||+++++    ++++.... +++.+++|+.+
T Consensus       421 ~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~~-~~~~~~~pl~~  482 (489)
T KOG0156|consen  421 LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEAG-LTLKKKKPLKA  482 (489)
T ss_pred             CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCcccc-cceecCCccee
Confidence            5678999999999999999999999999999999999999887    34455554 77888888654


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.2e-82  Score=586.09  Aligned_cols=460  Identities=27%  Similarity=0.432  Sum_probs=352.8

Q ss_pred             HHHHHHHHHHhhcccccCCCCCCCCccCcccccccccCCC-CCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHH
Q 048790           15 SSFVLILLIKQKTSKAQATRLPPGPWKLPLIGNLHQLTGD-SPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIF   93 (482)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~   93 (482)
                      ++.++++++.+....+..+ .+|+|+++|++||+..+... ....+..+.+.+||++|.++.+.+|.++|.|||++++|+
T Consensus        13 l~~l~y~~~~~~~~yw~rr-Gi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~   91 (499)
T KOG0158|consen   13 LLVLLYLWLRWTYSYWRRR-GIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEIL   91 (499)
T ss_pred             HHHHHHHHHHhhhhhhccC-CCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHH
Confidence            3334444555554455445 45788889999999887532 224445555555599999999999999999999999999


Q ss_pred             HhccccccCCCccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhcC--CCc
Q 048790           94 RTHDLIFSGRPELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSSA--GPT  171 (482)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~  171 (482)
                      .++.++|+++........-.......++..+|+.||+.|.. ++|.|++.+++++.+.+++.++++++.+.++..  ..+
T Consensus        92 ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~  170 (499)
T KOG0158|consen   92 IKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEG  170 (499)
T ss_pred             HHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCc
Confidence            99999999854211111110112345566779999999998 899999999999999999999999999988643  478


Q ss_pred             cHHHHHHHHHHHHHHHHhhccccccccc----------ccCccceeeccccc----cccchhcHHHHHHHHHHHHHHHHH
Q 048790          172 DLSRLIFLLANNIICRVTFGRKYDSEAD----------TGTTGFDIFFPWMG----WLDKFNGREARVMKIFRELDRFYD  237 (482)
Q Consensus       172 d~~~~~~~~~~~~i~~~~fG~~~~~~~~----------~~~~~~~~~~p~~~----~l~~~~~~~~~~~~~~~~~~~~~~  237 (482)
                      ++.+.+..++.|+|++++||.+.+...+          .....+...+++..    ..+.+... .+.........+++.
T Consensus       171 ~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~-l~~~~~~~~~~~~~~  249 (499)
T KOG0158|consen  171 EIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP-LRVKLFPEDVTDFFR  249 (499)
T ss_pred             cHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh-hhcccChHHHHHHHH
Confidence            9999999999999999999999875442          00000011122100    00111000 011111223333443


Q ss_pred             HHHHHHHhCCCC-CCCCcCcHHHHHHHhhcc---ccccc-CCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHH
Q 048790          238 EEILQQHLDPRR-PKPEHEDLVDVLVRIQKD---SSQAV-ALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVM  312 (482)
Q Consensus       238 ~~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~---~~~~~-~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q  312 (482)
                       +++.+..+.++ .+...+|+++.+++...+   ..... .+|.+||+++|+.+++||.||||+++++++|+||+|||+|
T Consensus       250 -~~v~~~v~~R~~~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ  328 (499)
T KOG0158|consen  250 -KLVNSRVEQREKENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQ  328 (499)
T ss_pred             -HHHHHHHHHHHhcCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHH
Confidence             33333333221 235688999999998753   11112 4999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhcCCccccccccccchhHHHHHHHhhccCCCCCCCCccccccccccc-ceeeCCCCEEEEehhhhccCCC
Q 048790          313 RRAQNEVRGVVKGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVG-EYEIPSGTRVLINAKAIATDPE  391 (482)
Q Consensus       313 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~-g~~ip~G~~v~~~~~~~~~d~~  391 (482)
                      +|||+||++++.....+++|.+.+|+||++||+||||+||+++. ..|.+++|++++ ++.||||+.|.++.+++||||+
T Consensus       329 ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~  407 (499)
T KOG0158|consen  329 DKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPE  407 (499)
T ss_pred             HHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeecccccCCcc
Confidence            99999999997655559999999999999999999999999998 679999999999 9999999999999999999999


Q ss_pred             CCCCCCCCCCCccccCccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcc
Q 048790          392 HWEHPFEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMT  471 (482)
Q Consensus       392 ~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  471 (482)
                      +||||++|+||||.+++.+ ..++..|+|||.|||.|+|++||.+|+|+.|++||++|+++..+ .+... ..-...+.+
T Consensus       408 ~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~~~~~~~~~  484 (499)
T KOG0158|consen  408 YWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-LEGDPKGFT  484 (499)
T ss_pred             cCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-ccCCcccee
Confidence            9999999999999977543 33677899999999999999999999999999999999999988 33232 333345899


Q ss_pred             cccCCCCCCCC
Q 048790          472 MHKKNSSLPSL  482 (482)
Q Consensus       472 ~~p~~~~~~~~  482 (482)
                      ..|++||.+|+
T Consensus       485 l~pk~gi~Lkl  495 (499)
T KOG0158|consen  485 LSPKGGIWLKL  495 (499)
T ss_pred             eecCCceEEEE
Confidence            99999998764


No 3  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.1e-80  Score=605.59  Aligned_cols=450  Identities=42%  Similarity=0.805  Sum_probs=368.5

Q ss_pred             cCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhh
Q 048790           31 QATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAK  110 (482)
Q Consensus        31 ~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~  110 (482)
                      ++.+.||||+++|++||++.+...++..++.+++++||++|++++|+.++++++||+++++|+.++...|..++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            34567899999999999988854467789999999999999999999999999999999999998877788777543333


Q ss_pred             hhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHHH
Q 048790          111 IFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS--SAGPTDLSRLIFLLANNIICRV  188 (482)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~  188 (482)
                      .....+..+.+...++.|+++||.+..++|++++++.+.+.+++.++++++.|.+.  .++.+|+.+++..+++|+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence            32323334445556789999999856789999999999999999999999999753  3567999999999999999999


Q ss_pred             hhcccccccccc---cCc----------c--ceeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Q 048790          189 TFGRKYDSEADT---GTT----------G--FDIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPKPE  253 (482)
Q Consensus       189 ~fG~~~~~~~~~---~~~----------~--~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (482)
                      +||.+++....+   ...          .  +...+|++.++..+.+..++..++.+.+.+++. ++++++.+..+....
T Consensus       185 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~  263 (499)
T PLN03234        185 AFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQ-ELLDETLDPNRPKQE  263 (499)
T ss_pred             HhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHhhcccCCC
Confidence            999987643210   000          0  001334433332223344566777888888888 888877654332334


Q ss_pred             cCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCccccccc
Q 048790          254 HEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREVVEESD  333 (482)
Q Consensus       254 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~  333 (482)
                      .+|+++.+++..++...+..++++++.++++++++||+|||+++++|++++|++||++|+|+++|+++++++.+.+++++
T Consensus       264 ~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~  343 (499)
T PLN03234        264 TESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEED  343 (499)
T ss_pred             cccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHH
Confidence            57899999876543322235899999999999999999999999999999999999999999999999998777789999


Q ss_pred             cccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCccccCccC--
Q 048790          334 ISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHW-EHPFEFRPERFLNSSID--  410 (482)
Q Consensus       334 l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~P~R~l~~~~~--  410 (482)
                      +++|||++|||+||+|++|+++..++|.+.+|++++||.|||||.|.++.+++||||++| +||++|+||||++++..  
T Consensus       344 l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~  423 (499)
T PLN03234        344 IPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVD  423 (499)
T ss_pred             HhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcC
Confidence            999999999999999999999986679999999999999999999999999999999999 89999999999975432  


Q ss_pred             CCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          411 LKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       411 ~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      ....+..++|||+|+|+|+|+++|++|+++++|+|+++|+++++++..++........+++..|+++|-++
T Consensus       424 ~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (499)
T PLN03234        424 FKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLA  494 (499)
T ss_pred             cCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEE
Confidence            12345679999999999999999999999999999999999998875545556666789999999988654


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=9e-79  Score=597.39  Aligned_cols=445  Identities=28%  Similarity=0.557  Sum_probs=349.6

Q ss_pred             ccCCCCCCCCccCcccccccccCCCC-CcHHHHHHHhhhC-CcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccc
Q 048790           30 AQATRLPPGPWKLPLIGNLHQLTGDS-PHVSLQKLSNEYG-PLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELY  107 (482)
Q Consensus        30 ~~~~~~ppgP~~~p~~G~~~~~~~~~-~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~  107 (482)
                      .++.+.||||+++|++||++++..+. .+.++.++.++|| +|+++++|+.++|+|+||+.+++++.+++..|++++...
T Consensus        53 ~r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         53 KKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            34567899999999999998884433 3567899999999 899999999999999999999999999888888887644


Q ss_pred             hhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHH
Q 048790          108 AAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS--SAGPTDLSRLIFLLANNII  185 (482)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i  185 (482)
                      .....+.+..++++..+|+.|+++||.+..+++++..++.+.+.++++++.+++.+.+.  .++++|+.+.+.+++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            43333322234577778999999999965677777777788899999999998888653  2467999999999999999


Q ss_pred             HHHhhccccccc------cc---------ccCccc--------eeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHH
Q 048790          186 CRVTFGRKYDSE------AD---------TGTTGF--------DIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQ  242 (482)
Q Consensus       186 ~~~~fG~~~~~~------~~---------~~~~~~--------~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (482)
                      ++++||.++...      ++         ......        ..++|++.+++ +.+..+...+..+.+.+++. ++++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~  290 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHD-PIID  290 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHH-HHHH
Confidence            999999876311      00         000000        01233332221 11223344445566777777 7776


Q ss_pred             HHhCCCCC--CCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHH
Q 048790          243 QHLDPRRP--KPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVR  320 (482)
Q Consensus       243 ~~~~~~~~--~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~  320 (482)
                      ++++..+.  .....|+++.+++...+.+ ...++++++.+++.++++||+|||+++++|++++|+.||++|+|+++||+
T Consensus       291 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~  369 (543)
T PLN02971        291 ERIKMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEID  369 (543)
T ss_pred             HHHHHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            66542221  1234699999998643221 12489999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCC
Q 048790          321 GVVKGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFR  400 (482)
Q Consensus       321 ~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~  400 (482)
                      +++++++.++++++++|||++|||+||||++|++|..++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+
T Consensus       370 ~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~  449 (543)
T PLN02971        370 RVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFK  449 (543)
T ss_pred             HHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccC
Confidence            99987788999999999999999999999999999877899999999999999999999999999999999999999999


Q ss_pred             CCccccCccCC--CCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCC
Q 048790          401 PERFLNSSIDL--KGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSS  478 (482)
Q Consensus       401 P~R~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  478 (482)
                      ||||++++.+.  ...+..|+|||+|+|.|+|++||+.|+++++++|+++|+++++++...  .+....++ ++...+|+
T Consensus       450 PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~-~~~~~~~~  526 (543)
T PLN02971        450 PERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETR--VELMESSH-DMFLSKPL  526 (543)
T ss_pred             cccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCC--cchhhhcC-cccccccc
Confidence            99999753221  123567999999999999999999999999999999999998765432  33444455 55444454


Q ss_pred             CC
Q 048790          479 LP  480 (482)
Q Consensus       479 ~~  480 (482)
                      .+
T Consensus       527 ~~  528 (543)
T PLN02971        527 VM  528 (543)
T ss_pred             ee
Confidence            43


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=2.7e-78  Score=592.30  Aligned_cols=450  Identities=39%  Similarity=0.757  Sum_probs=363.2

Q ss_pred             cccCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccch
Q 048790           29 KAQATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYA  108 (482)
Q Consensus        29 ~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~  108 (482)
                      +.++.+.||||.++|++||++.+ ..+++.++.+++++||++|++++|+.++++++||+++++++.++...|++++....
T Consensus        29 ~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~  107 (517)
T PLN02687         29 GKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSG  107 (517)
T ss_pred             CCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccc
Confidence            34455678999999999999888 45678899999999999999999999999999999999999987777887765443


Q ss_pred             hhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHH
Q 048790          109 AKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS-SAGPTDLSRLIFLLANNIICR  187 (482)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~-~~~~~d~~~~~~~~~~~~i~~  187 (482)
                      ...+...+.+++++.+|+.|+++||.+..++|+.++++.+.+.+++++.++++.|.+. +++++|+.+++..+++|+++.
T Consensus       108 ~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~  187 (517)
T PLN02687        108 AEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGR  187 (517)
T ss_pred             hhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence            3333333456677778999999999944488999999999999999999999999764 356799999999999999999


Q ss_pred             Hhhcccccccc--c----------ccC---ccce--eeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 048790          188 VTFGRKYDSEA--D----------TGT---TGFD--IFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRP  250 (482)
Q Consensus       188 ~~fG~~~~~~~--~----------~~~---~~~~--~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (482)
                      ++||.++....  +          ...   ..+.  ..+|++.++.. ....++..+..+.+.+++. ++++++.+..+.
T Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~~~~~~~~-~~i~~r~~~~~~  265 (517)
T PLN02687        188 AMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHRRFDAMMN-GIIEEHKAAGQT  265 (517)
T ss_pred             HHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHHHHHHHHH-HHHHHHHHhccc
Confidence            99998864211  1          000   0010  13343333221 1223344555667777787 777777654322


Q ss_pred             -CCCcCcHHHHHHHhhccc---ccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCC
Q 048790          251 -KPEHEDLVDVLVRIQKDS---SQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGR  326 (482)
Q Consensus       251 -~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~  326 (482)
                       +....|+++.+++...+.   ..+..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.+
T Consensus       266 ~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~  345 (517)
T PLN02687        266 GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRD  345 (517)
T ss_pred             cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC
Confidence             234579999999865431   1123689999999999999999999999999999999999999999999999998777


Q ss_pred             ccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCcccc
Q 048790          327 EVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLN  406 (482)
Q Consensus       327 ~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~  406 (482)
                      +.++++++++||||+|||+||+|++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++
T Consensus       346 ~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~  425 (517)
T PLN02687        346 RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLP  425 (517)
T ss_pred             CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCC
Confidence            77899999999999999999999999999877899999999999999999999999999999999999999999999997


Q ss_pred             CccC----CCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          407 SSID----LKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       407 ~~~~----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      ++..    .......++|||+|+|.|+|++||++|+++++++|+++|++++.++.++++++.....++++.|.+++.++
T Consensus       426 ~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (517)
T PLN02687        426 GGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVH  504 (517)
T ss_pred             CCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEe
Confidence            4321    11234579999999999999999999999999999999999998776544444444567777777777664


No 6  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.5e-78  Score=592.49  Aligned_cols=451  Identities=39%  Similarity=0.759  Sum_probs=354.0

Q ss_pred             cccCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccch
Q 048790           29 KAQATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYA  108 (482)
Q Consensus        29 ~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~  108 (482)
                      ..+..+.||||+++|++||++++....++..+.+++++||++|++++++.++++++||+.+++|+.++...|.+++....
T Consensus        24 ~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         24 KTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             ccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            33445679999999999999988555678899999999999999999999999999999999999877766665554332


Q ss_pred             hhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHH
Q 048790          109 AKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS--SAGPTDLSRLIFLLANNIIC  186 (482)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i~  186 (482)
                      ......+.....+..+|+.|+++|+.++.++|+..+++.+.+.+++.+.++++.|.+.  .++.+|+.+++..+++|+++
T Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~  183 (502)
T PLN02966        104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVC  183 (502)
T ss_pred             ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHH
Confidence            2222222333445556899999999877899999999999999999999999999763  24579999999999999999


Q ss_pred             HHhhcccccccccc---cCc----------c--ceeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 048790          187 RVTFGRKYDSEADT---GTT----------G--FDIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPK  251 (482)
Q Consensus       187 ~~~fG~~~~~~~~~---~~~----------~--~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (482)
                      .++||.+++...+.   ...          .  +..++|++..+..+...........+...+++. +.+++..+.....
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~  262 (502)
T PLN02966        184 RQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQ-EVVNETLDPKRVK  262 (502)
T ss_pred             HHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHH-HHHHHHHhccccc
Confidence            99999987643211   000          0  011234322221111212222334445566666 6666554332222


Q ss_pred             CCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCC--ccc
Q 048790          252 PEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGR--EVV  329 (482)
Q Consensus       252 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~--~~~  329 (482)
                      ....|+++.+++..++...+..++++++.++++++++||+|||+++++|++++|++||++|+|+++||+++++.+  +.+
T Consensus       263 ~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~  342 (502)
T PLN02966        263 PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFV  342 (502)
T ss_pred             cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcC
Confidence            235689999997654432223589999999999999999999999999999999999999999999999998642  357


Q ss_pred             cccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCccccCc
Q 048790          330 EESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHW-EHPFEFRPERFLNSS  408 (482)
Q Consensus       330 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~P~R~l~~~  408 (482)
                      +++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++| +||++|+||||++++
T Consensus       343 ~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~  422 (502)
T PLN02966        343 TEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKE  422 (502)
T ss_pred             CHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCC
Confidence            9999999999999999999999999987789999999999999999999999999999999999 999999999999754


Q ss_pred             cCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCC
Q 048790          409 IDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLP  480 (482)
Q Consensus       409 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  480 (482)
                      .+.......|+|||+|+|+|+|++||++|+++++|+|+++|++++.++.+.+.++.+...+++..+.+++.+
T Consensus       423 ~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (502)
T PLN02966        423 VDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKL  494 (502)
T ss_pred             CCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEE
Confidence            322234557999999999999999999999999999999999999888765555555566666655456543


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.6e-78  Score=591.29  Aligned_cols=443  Identities=39%  Similarity=0.773  Sum_probs=350.5

Q ss_pred             CCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhhh
Q 048790           33 TRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKIF  112 (482)
Q Consensus        33 ~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~  112 (482)
                      .+.||||+++|++||++.+ ....+.++.+|+++||++|++++|+.++|+|+||+++++|+.++...|+.++........
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~  113 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYL  113 (516)
T ss_pred             CCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhcc
Confidence            4678999999999999877 444567899999999999999999999999999999999999877777777654332222


Q ss_pred             ccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHhhcc
Q 048790          113 SYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSSAGPTDLSRLIFLLANNIICRVTFGR  192 (482)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~  192 (482)
                      ...+.+.+++.+|+.|+++||.++.++|+.+.++.+.+.+ +++..+++.+....++++|+.+++..++++++++++||.
T Consensus       114 ~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG~  192 (516)
T PLN02183        114 TYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFGS  192 (516)
T ss_pred             ccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhcC
Confidence            2223456777789999999998667899999999888864 678999999975446789999999999999999999998


Q ss_pred             cccccccc-------c---Cccc--eeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-------CCC
Q 048790          193 KYDSEADT-------G---TTGF--DIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRP-------KPE  253 (482)
Q Consensus       193 ~~~~~~~~-------~---~~~~--~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  253 (482)
                      +.+.....       .   ...+  ...+|++.++.. ....++..+..+.+.+++. ++++++.+..+.       ...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~  270 (516)
T PLN02183        193 SSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFID-DIIDDHIQKRKNQNADNDSEEA  270 (516)
T ss_pred             cccchHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHH-HHHHHHHHhhcccccccccccc
Confidence            76543210       0   1111  114454433311 1223455556667777777 666655432211       112


Q ss_pred             cCcHHHHHHHhhcccc---------cccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhc
Q 048790          254 HEDLVDVLVRIQKDSS---------QAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVK  324 (482)
Q Consensus       254 ~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~  324 (482)
                      .+|+++.++++..+..         .+..++++++.++++++++||+|||+.+++|++++|++||++|+|+++|++++++
T Consensus       271 ~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~  350 (516)
T PLN02183        271 ETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVG  350 (516)
T ss_pred             cccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC
Confidence            4689999997543211         1125899999999999999999999999999999999999999999999999987


Q ss_pred             CCccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCcc
Q 048790          325 GREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERF  404 (482)
Q Consensus       325 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~  404 (482)
                      .++.++++++++|||++|||+||||++|++|.. .|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||
T Consensus       351 ~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRf  429 (516)
T PLN02183        351 LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRF  429 (516)
T ss_pred             CCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhh
Confidence            666789999999999999999999999999985 5999999999999999999999999999999999999999999999


Q ss_pred             ccCccC-CCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCC
Q 048790          405 LNSSID-LKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLP  480 (482)
Q Consensus       405 l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  480 (482)
                      ++++.+ ...+...|+|||+|+|+|+|++||++|+++++|+|+++|++++.++..+++++....++.+..+.+++.+
T Consensus       430 l~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (516)
T PLN02183        430 LKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVA  506 (516)
T ss_pred             CCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEE
Confidence            975321 1224457999999999999999999999999999999999999887654445444455555545555543


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.2e-77  Score=582.17  Aligned_cols=470  Identities=35%  Similarity=0.682  Sum_probs=370.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEee
Q 048790            5 FFFLLLLITTSSFVLILLIKQKTSKAQATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVIS   84 (482)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~   84 (482)
                      +++-+.+..++.++..+++++... ..+.+.||||+++|++||++.+ ...++.++.+++++||+|+++++|+.++|+|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~   80 (504)
T PLN00110          3 LLLELAAATLLFFITRFFIRSLLP-KPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVAS   80 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-cccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEEC
Confidence            445555556666665555555444 3455679999999999999887 45578899999999999999999999999999


Q ss_pred             CHHHHHHHHHhccccccCCCccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHH
Q 048790           85 SADVARDIFRTHDLIFSGRPELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIA  164 (482)
Q Consensus        85 ~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~  164 (482)
                      ||+++++++.++...|+.++..........+..+++++.+|+.|+++|+.+....|+.++++.+.+.+.++++.+++.+.
T Consensus        81 dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~  160 (504)
T PLN00110         81 TPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAML  160 (504)
T ss_pred             CHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHH
Confidence            99999999998877788777543222222233456677789999999999545689999999999999999999998886


Q ss_pred             Hh--cCCCccHHHHHHHHHHHHHHHHhhccccc-ccc---c-------ccC---ccc--eeeccccccccchhcHHHHHH
Q 048790          165 RS--SAGPTDLSRLIFLLANNIICRVTFGRKYD-SEA---D-------TGT---TGF--DIFFPWMGWLDKFNGREARVM  226 (482)
Q Consensus       165 ~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~-~~~---~-------~~~---~~~--~~~~p~~~~l~~~~~~~~~~~  226 (482)
                      +.  .++++|+.+++..++++++++++||.++. ...   .       ...   ...  ...+|++.++. .....+...
T Consensus       161 ~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~  239 (504)
T PLN00110        161 ELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERGMK  239 (504)
T ss_pred             HhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHHHH
Confidence            53  35678999999999999999999998762 111   1       000   001  01334433321 112234444


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHh
Q 048790          227 KIFRELDRFYDEEILQQHLDPRRPKPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFI  306 (482)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~  306 (482)
                      +..+.+.+++. +.++++.+..+......|+++.+++...+. .+..++++++.++++++++||+|||+++++|++++|+
T Consensus       240 ~~~~~~~~~~~-~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~  317 (504)
T PLN00110        240 HLHKKFDKLLT-RMIEEHTASAHERKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEML  317 (504)
T ss_pred             HHHHHHHHHHH-HHHHHHHhhccccccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHH
Confidence            55666777777 666666543322223468999999754322 1236899999999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHhhhcCCccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhh
Q 048790          307 RNPSVMRRAQNEVRGVVKGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAI  386 (482)
Q Consensus       307 ~~P~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~  386 (482)
                      +||++|+|+++|++++++..+.++++++++|||++|||+||+|++|+++..++|.+.+|++++||.|||||.|+++.+++
T Consensus       318 ~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~  397 (504)
T PLN00110        318 KNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAI  397 (504)
T ss_pred             hCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHh
Confidence            99999999999999998877778999999999999999999999999998778999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCCccccCccCCC---CCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCC
Q 048790          387 ATDPEHWEHPFEFRPERFLNSSIDLK---GNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLD  463 (482)
Q Consensus       387 ~~d~~~~~~p~~f~P~R~l~~~~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  463 (482)
                      ||||++|+||++|+||||++++....   .+...++|||+|+|.|+|++||++|+++++++|+++|++++.++..   .+
T Consensus       398 h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~  474 (504)
T PLN00110        398 GRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVE---LN  474 (504)
T ss_pred             cCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCc---cC
Confidence            99999999999999999996532111   1234799999999999999999999999999999999999877642   33


Q ss_pred             cccCCCcccccCCCCCCCC
Q 048790          464 MEEAPGMTMHKKNSSLPSL  482 (482)
Q Consensus       464 ~~~~~~~~~~p~~~~~~~~  482 (482)
                      .....++++.|++|+.+++
T Consensus       475 ~~~~~~~~~~~~~~~~~~~  493 (504)
T PLN00110        475 MDEAFGLALQKAVPLSAMV  493 (504)
T ss_pred             cccccccccccCCCceEee
Confidence            3445678889999887753


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=8.5e-77  Score=582.98  Aligned_cols=475  Identities=34%  Similarity=0.654  Sum_probs=372.0

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccE
Q 048790            1 MISQFFFLLLLITTSSFVLILLIKQKTSKAQATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPT   80 (482)
Q Consensus         1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~   80 (482)
                      |.|.++.++++++++.++++.++++  +..++.+.||||+++|++||++++ ...++.++.++++|||++|++++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~   77 (514)
T PLN03112          1 MDSFLLSLLFSVLIFNVLIWRWLNA--SMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDA   77 (514)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHccc--cccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccE
Confidence            5566776666666666655554443  334455678999999999999888 4567888999999999999999999999


Q ss_pred             EEeeCHHHHHHHHHhccccccCCCccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHH
Q 048790           81 LVISSADVARDIFRTHDLIFSGRPELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMI  160 (482)
Q Consensus        81 vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~  160 (482)
                      ++++||+++++|+.++...|++++.........++...+++..+|+.|+++||.+..+.|+..+++.+.+.+.++++.++
T Consensus        78 v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv  157 (514)
T PLN03112         78 ITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLI  157 (514)
T ss_pred             EEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHH
Confidence            99999999999998887778877654322222222334556677999999999866778999999999999999999999


Q ss_pred             HHHHHh--cCCCccHHHHHHHHHHHHHHHHhhcccccccc----c----------ccCc-----cceeeccccccccchh
Q 048790          161 KIIARS--SAGPTDLSRLIFLLANNIICRVTFGRKYDSEA----D----------TGTT-----GFDIFFPWMGWLDKFN  219 (482)
Q Consensus       161 ~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~----~----------~~~~-----~~~~~~p~~~~l~~~~  219 (482)
                      +.+.+.  .++.+|+.+++..++++++++++||.++....    +          ....     .+..++|++.++.. .
T Consensus       158 ~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~  236 (514)
T PLN03112        158 QDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-Y  236 (514)
T ss_pred             HHHHHhhccCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-c
Confidence            887543  25679999999999999999999999863211    0          0000     00012343333221 1


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---CCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHh
Q 048790          220 GREARVMKIFRELDRFYDEEILQQHLDPRRP---KPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSA  296 (482)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~  296 (482)
                      ...++..+..+.+.+++. ..++++++..+.   .....|+++.++++..+.+ +..++++++.++++++++||+||||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~  314 (514)
T PLN03112        237 GCEKKMREVEKRVDEFHD-KIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAV  314 (514)
T ss_pred             cHHHHHHHHHHHHHHHHH-HHHHHHHHhhcccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHH
Confidence            223445556666777777 777665543221   1234689999998643321 22589999999999999999999999


Q ss_pred             HHHHHHHHHhhChHHHHHHHHHHHhhhcCCccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCC
Q 048790          297 TLGWTMTEFIRNPSVMRRAQNEVRGVVKGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSG  376 (482)
Q Consensus       297 ~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G  376 (482)
                      +++|++++|++||++|+|+++||+++.+.++.++++++++|||++|||+||+|++|+++..++|.+.+|++++||.||||
T Consensus       315 ~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkG  394 (514)
T PLN03112        315 TNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAK  394 (514)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCC
Confidence            99999999999999999999999999887777999999999999999999999999999867899999999999999999


Q ss_pred             CEEEEehhhhccCCCCCCCCCCCCCCccccCccC---C-CCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccc
Q 048790          377 TRVLINAKAIATDPEHWEHPFEFRPERFLNSSID---L-KGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWK  452 (482)
Q Consensus       377 ~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~  452 (482)
                      |.|.++.+++||||++|+||++|+||||..+..+   . ......++|||+|+|+|||++||++|+++++++|+++|+++
T Consensus       395 t~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~  474 (514)
T PLN03112        395 TRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWS  474 (514)
T ss_pred             CEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeee
Confidence            9999999999999999999999999998753211   0 11245799999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          453 LPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      +.++...+++......++++.+.+++-++
T Consensus       475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (514)
T PLN03112        475 PPDGLRPEDIDTQEVYGMTMPKAKPLRAV  503 (514)
T ss_pred             cCCCCCcccCCCccccCcccccCCCeEEE
Confidence            87665444555555667777777776543


No 10 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=3.5e-76  Score=577.69  Aligned_cols=449  Identities=29%  Similarity=0.520  Sum_probs=351.6

Q ss_pred             ccccCCCCCCCCccCcccccccccC--CCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCc
Q 048790           28 SKAQATRLPPGPWKLPLIGNLHQLT--GDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPE  105 (482)
Q Consensus        28 ~~~~~~~~ppgP~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  105 (482)
                      ..++..+.||||+++|++||++.+.  ...++.++.+++++||++|++++|+.++++|+||+++++++.++...|+.++.
T Consensus        29 ~~~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~  108 (519)
T PLN00168         29 GGKKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPA  108 (519)
T ss_pred             CCCCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCc
Confidence            3345567899999999999998663  23456789999999999999999999999999999999999988888887776


Q ss_pred             cchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhc--CCCccHHHHHHHHHHH
Q 048790          106 LYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSS--AGPTDLSRLIFLLANN  183 (482)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~d~~~~~~~~~~~  183 (482)
                      .......+.+...+.+..+|+.|+++||.++.++|+.++++++.+.+.+.++.+++.|.+..  ++.+|+.+.+..++.+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~  188 (519)
T PLN00168        109 VASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFC  188 (519)
T ss_pred             ccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHH
Confidence            44333333221222333679999999986689999999999999999999999999997643  3468999999999999


Q ss_pred             HHHHHhhccccccccc----c----c----Cccce--eeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 048790          184 IICRVTFGRKYDSEAD----T----G----TTGFD--IFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRR  249 (482)
Q Consensus       184 ~i~~~~fG~~~~~~~~----~----~----~~~~~--~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (482)
                      +++.++||.++++...    .    .    .....  ..+|++.+.. ......+..+..+.+.+++. ++++++++...
T Consensus       189 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~  266 (519)
T PLN00168        189 LLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFV-PLIDARREYKN  266 (519)
T ss_pred             HHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHH-HHHHHHHHHhh
Confidence            9999999998764321    0    0    00010  1333322110 11223344456667777777 77766554210


Q ss_pred             ---C-C-------CCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHH
Q 048790          250 ---P-K-------PEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNE  318 (482)
Q Consensus       250 ---~-~-------~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~E  318 (482)
                         . +       ....|+++.|++.......+..++++++.++++++++||+|||+++++|++++|++||++|+|+++|
T Consensus       267 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~E  346 (519)
T PLN00168        267 HLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDE  346 (519)
T ss_pred             hccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence               0 0       1145899999976432222236999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCC-ccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCC
Q 048790          319 VRGVVKGR-EVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPF  397 (482)
Q Consensus       319 i~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~  397 (482)
                      |++++++. +.++++++++||||+|||+||+|++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|+||+
T Consensus       347 i~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~  426 (519)
T PLN00168        347 IKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPM  426 (519)
T ss_pred             HHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcc
Confidence            99998753 56899999999999999999999999999877899999999999999999999999999999999999999


Q ss_pred             CCCCCccccCccC-----CCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCccc
Q 048790          398 EFRPERFLNSSID-----LKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTM  472 (482)
Q Consensus       398 ~f~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  472 (482)
                      +|+||||++++..     ...+...|+|||+|+|+|||++||++|+++++++|+++|+|++.++..   ++.....+++.
T Consensus       427 ~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~  503 (519)
T PLN00168        427 EFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKREFTT  503 (519)
T ss_pred             ccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhceeEE
Confidence            9999999974211     112345799999999999999999999999999999999999987643   22333345677


Q ss_pred             ccCCCCCCC
Q 048790          473 HKKNSSLPS  481 (482)
Q Consensus       473 ~p~~~~~~~  481 (482)
                      .|.+|+.++
T Consensus       504 ~~~~~~~~~  512 (519)
T PLN00168        504 VMAKPLRAR  512 (519)
T ss_pred             eecCCcEEE
Confidence            788887654


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.1e-76  Score=577.11  Aligned_cols=443  Identities=30%  Similarity=0.587  Sum_probs=340.6

Q ss_pred             cCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhh
Q 048790           31 QATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAK  110 (482)
Q Consensus        31 ~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~  110 (482)
                      .+.+.||||+++|++|+++.+..+..+..+.+++++||+||++++|+.++|+|+||+.+++++.++...|..++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            34678999999999999988854445678999999999999999999999999999999999988776677665433333


Q ss_pred             hhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhc---CCCccHHHHHHHHHHHHHHH
Q 048790          111 IFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSS---AGPTDLSRLIFLLANNIICR  187 (482)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~d~~~~~~~~~~~~i~~  187 (482)
                      .....+.+++++.+|+.|+++||.+..++|+.++++.+.+.++++++++++.+.+..   ++.+|+.+++..+++|++++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            333234456777789999999998445999999999999999999999999987542   34589999999999999999


Q ss_pred             HhhcccccccccccC--------------ccc--e--eeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 048790          188 VTFGRKYDSEADTGT--------------TGF--D--IFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRR  249 (482)
Q Consensus       188 ~~fG~~~~~~~~~~~--------------~~~--~--~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (482)
                      ++||.+++...+...              ..+  .  .++|++...  +....+..........+.+.+..++++.+..+
T Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  264 (503)
T PLN02394        187 MMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKKLMS  264 (503)
T ss_pred             HHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999998864321100              000  0  012222110  01111111121222222222134444432111


Q ss_pred             ----CCCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcC
Q 048790          250 ----PKPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKG  325 (482)
Q Consensus       250 ----~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~  325 (482)
                          +.....|+++.++++..++    .++++++..++.++++||+||||.+++|++++|++||++|+|+++||+++.+.
T Consensus       265 ~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~  340 (503)
T PLN02394        265 AKGMDKEGLKCAIDHILEAQKKG----EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP  340 (503)
T ss_pred             hccCCcchhhhHHHHHHhccccC----CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC
Confidence                1123468999999765332    58999999999999999999999999999999999999999999999999876


Q ss_pred             CccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccc
Q 048790          326 REVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFL  405 (482)
Q Consensus       326 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l  405 (482)
                      ++.++++++++||||+|||+||+|++|++|...+|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+
T Consensus       341 ~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl  420 (503)
T PLN02394        341 GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFL  420 (503)
T ss_pred             CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccC
Confidence            66789999999999999999999999999988789999999999999999999999999999999999999999999999


Q ss_pred             cCccC--CCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCC-cccccCCCCCCC
Q 048790          406 NSSID--LKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPG-MTMHKKNSSLPS  481 (482)
Q Consensus       406 ~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~  481 (482)
                      +++.+  .......++|||+|+|+|+|++||++|+++++|+|+++|++++.+|.+  .++.....+ ++..+..|..++
T Consensus       421 ~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  497 (503)
T PLN02394        421 EEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHSTVV  497 (503)
T ss_pred             CCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCceEE
Confidence            75321  122356799999999999999999999999999999999999887752  233333332 444344465554


No 12 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2e-75  Score=569.23  Aligned_cols=434  Identities=27%  Similarity=0.457  Sum_probs=338.7

Q ss_pred             ccCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchh
Q 048790           30 AQATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAA  109 (482)
Q Consensus        30 ~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~  109 (482)
                      +...+.+|||+++|++||++.+ ...++..+.+++++||+||++++|+.++|+++||+++++++.++...|..++.....
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  103 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI  103 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence            3446678999999999999888 456788999999999999999999999999999999999998776667666543322


Q ss_pred             hhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHH
Q 048790          110 KIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS--SAGPTDLSRLIFLLANNIICR  187 (482)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i~~  187 (482)
                      .... .+.++ +..+|+.|+++|++ +.+.|+...++.+.+.+.+.++.+++.|.+.  .++.+|+.+++.++++|+++.
T Consensus       104 ~~~~-~~~~l-~~~~g~~w~~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  180 (482)
T PTZ00404        104 KHGT-FYHGI-VTSSGEYWKRNREI-VGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFK  180 (482)
T ss_pred             eeec-cCCce-eccChHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHH
Confidence            1111 13444 45579999999998 7899999999999999999999999999753  356799999999999999999


Q ss_pred             Hhhccccccccc-------ccCcc----ce-----eecccccccc-chhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 048790          188 VTFGRKYDSEAD-------TGTTG----FD-----IFFPWMGWLD-KFNGREARVMKIFRELDRFYDEEILQQHLDPRRP  250 (482)
Q Consensus       188 ~~fG~~~~~~~~-------~~~~~----~~-----~~~p~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (482)
                      ++||.+++...+       .....    +.     ....++..+. .+........+..+.+.+++. +.++++++..+.
T Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~  259 (482)
T PTZ00404        181 YIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIK-EKYHEHLKTIDP  259 (482)
T ss_pred             HHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHccCC
Confidence            999998753211       00000    00     0001111110 001111223344556777776 666555443221


Q ss_pred             CCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCcccc
Q 048790          251 KPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREVVE  330 (482)
Q Consensus       251 ~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~  330 (482)
                       ...+|+++.++++..+..   ..+.+++.++++++++||+|||+++++|++++|++||++|+|+++|++++.++++.++
T Consensus       260 -~~~~dll~~ll~~~~~~~---~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~  335 (482)
T PTZ00404        260 -EVPRDLLDLLIKEYGTNT---DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVL  335 (482)
T ss_pred             -CCcccHHHHHHHHhccCC---cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCC
Confidence             235689999997642211   2233458899999999999999999999999999999999999999999998767789


Q ss_pred             ccccccchhHHHHHHHhhccCCCCCCCCcccccccccc-cceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCcc
Q 048790          331 ESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRV-GEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSI  409 (482)
Q Consensus       331 ~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~  409 (482)
                      ++++++||||+|||+||||++|+++..++|.+.+|+++ +||.|||||.|.++.+++||||++|+||++|+||||+++. 
T Consensus       336 ~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-  414 (482)
T PTZ00404        336 LSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-  414 (482)
T ss_pred             ccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-
Confidence            99999999999999999999999997678999999999 9999999999999999999999999999999999999642 


Q ss_pred             CCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          410 DLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       410 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                          .+..++|||+|+|.|+|++||++|+++++++|+++|++++.++++   .......++++.| +++.|+
T Consensus       415 ----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~-~~~~v~  478 (482)
T PTZ00404        415 ----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKK---IDETEEYGLTLKP-NKFKVL  478 (482)
T ss_pred             ----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCC---CCcccccceeecC-CCceee
Confidence                345799999999999999999999999999999999999876643   1122244666665 445543


No 13 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=7.4e-76  Score=576.62  Aligned_cols=435  Identities=23%  Similarity=0.404  Sum_probs=341.2

Q ss_pred             CCCCCCCCccCcccccccccCC------------------CCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHH
Q 048790           32 ATRLPPGPWKLPLIGNLHQLTG------------------DSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIF   93 (482)
Q Consensus        32 ~~~~ppgP~~~p~~G~~~~~~~------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~   93 (482)
                      ....||||+++|++||++++..                  ......+.+|+++||++|++++|+.++++++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            4456899999999999987631                  1223357889999999999999999999999999999999


Q ss_pred             HhccccccCCCccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhc--C-CC
Q 048790           94 RTHDLIFSGRPELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSS--A-GP  170 (482)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~--~-~~  170 (482)
                      .++.. +..++...........+.++ +..+|+.|+++||. +.+.|+..+++.+.+.+.++++++++.+.+..  + ..
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g~~l-~~~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIGRGL-LMANGADWYHQRHI-AAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhcCCc-cccCchHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            87633 44444321111111123444 44569999999998 78999999999999999999999999997642  2 47


Q ss_pred             ccHHHHHHHHHHHHHHHHhhccccccccc--cc----Cc---cc--eeeccccccccchhcHHHHHHHHHHHHHHHHHHH
Q 048790          171 TDLSRLIFLLANNIICRVTFGRKYDSEAD--TG----TT---GF--DIFFPWMGWLDKFNGREARVMKIFRELDRFYDEE  239 (482)
Q Consensus       171 ~d~~~~~~~~~~~~i~~~~fG~~~~~~~~--~~----~~---~~--~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  239 (482)
                      +|+.+++..++++++++++||.+++...+  ..    ..   ..  ...+|++.+++  ....+...+..+.+.+++. +
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~~~~~~~~~~~~~-~  273 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREIKSLKGEVERLLM-E  273 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHHHHHHHHHHHHHH-H
Confidence            89999999999999999999998754321  00    00   00  01233332222  1223344455667777877 7


Q ss_pred             HHHHHhCCCCC---CCCcCcHHHHHHHhhccc-ccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHH
Q 048790          240 ILQQHLDPRRP---KPEHEDLVDVLVRIQKDS-SQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRA  315 (482)
Q Consensus       240 ~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l  315 (482)
                      .++++++..+.   ....+|+++.+++...+. ..+..++++++.++++++++||+|||+++++|++++|++||++|+|+
T Consensus       274 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl  353 (516)
T PLN02290        274 IIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKV  353 (516)
T ss_pred             HHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            77766543221   123578999999754322 11234789999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC-C
Q 048790          316 QNEVRGVVKGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHW-E  394 (482)
Q Consensus       316 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~  394 (482)
                      ++|++++++++ .++++++++||||+|||+||+|++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++| +
T Consensus       354 ~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~  431 (516)
T PLN02290        354 RAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGK  431 (516)
T ss_pred             HHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCC
Confidence            99999998764 78999999999999999999999999996 689999999999999999999999999999999999 8


Q ss_pred             CCCCCCCCccccCccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCccccc
Q 048790          395 HPFEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHK  474 (482)
Q Consensus       395 ~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p  474 (482)
                      ||++|+||||+++..   .....++|||.|+|.|+|++||++|+++++++|+++|++++.++.+     ......++++|
T Consensus       432 dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p  503 (516)
T PLN02290        432 DANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR-----HAPVVVLTIKP  503 (516)
T ss_pred             ChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc-----cCccceeeecC
Confidence            999999999995421   1234699999999999999999999999999999999999877642     11223688899


Q ss_pred             CCCCCCCC
Q 048790          475 KNSSLPSL  482 (482)
Q Consensus       475 ~~~~~~~~  482 (482)
                      ++++.+++
T Consensus       504 ~~~~~~~~  511 (516)
T PLN02290        504 KYGVQVCL  511 (516)
T ss_pred             CCCCeEEE
Confidence            99987764


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.4e-74  Score=559.31  Aligned_cols=433  Identities=28%  Similarity=0.471  Sum_probs=345.6

Q ss_pred             CCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhhhccC
Q 048790           36 PPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKIFSYN  115 (482)
Q Consensus        36 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  115 (482)
                      ||||+++|++||++++..+.++.++.+|+++||++|++++|+.++++|+||+++++++.++...|++++.......+...
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999999986566788999999999999999999999999999999999999888888777643333323222


Q ss_pred             CcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHHhhc
Q 048790          116 CSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS----SAGPTDLSRLIFLLANNIICRVTFG  191 (482)
Q Consensus       116 ~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~----~~~~~d~~~~~~~~~~~~i~~~~fG  191 (482)
                      +..+.+..+|+.|+++||.+..++++...++.+.+.+.+.++.+++.+.+.    +++.+|+.+++..+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            233444456899999999867888998888889999888888888877542    3567999999999999999999999


Q ss_pred             cccccccc-ccC-------------c-c--------ceeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 048790          192 RKYDSEAD-TGT-------------T-G--------FDIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPR  248 (482)
Q Consensus       192 ~~~~~~~~-~~~-------------~-~--------~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (482)
                      .+++.... +..             . .        +...+|.+.+++. ....+...+....+.+++. ++++++++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~  238 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMK-ALIKQQKKRI  238 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence            88654210 000             0 0        0013343333321 1112222223334456666 6666665443


Q ss_pred             CCCCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCcc
Q 048790          249 RPKPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREV  328 (482)
Q Consensus       249 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~  328 (482)
                      ..+....|+++.++...      ..++++++.++++++++||+|||+++++|++++|++||++|+|+++||+++.+.+. 
T Consensus       239 ~~~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-  311 (466)
T PLN02655        239 ARGEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-  311 (466)
T ss_pred             cCCCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-
Confidence            33334568999999753      15899999999999999999999999999999999999999999999999987654 


Q ss_pred             ccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCc
Q 048790          329 VEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSS  408 (482)
Q Consensus       329 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~  408 (482)
                      +++++++++||++||++||||++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++
T Consensus       312 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~  391 (466)
T PLN02655        312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEK  391 (466)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCC
Confidence            89999999999999999999999999987789999999999999999999999999999999999999999999999754


Q ss_pred             cCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCCC
Q 048790          409 IDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPSL  482 (482)
Q Consensus       409 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  482 (482)
                      .+. .....++|||+|+|.|||++||..|+++++++||++|++++.++.. .   .....+++..|++|+.+++
T Consensus       392 ~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~  460 (466)
T PLN02655        392 YES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-E---KEDTVQLTTQKLHPLHAHL  460 (466)
T ss_pred             ccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-c---ccchhheeEeecCCcEEEE
Confidence            221 1235789999999999999999999999999999999999877642 1   2234577888999988753


No 15 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=4.9e-75  Score=566.64  Aligned_cols=412  Identities=20%  Similarity=0.303  Sum_probs=321.8

Q ss_pred             cccCCCCCCCCccCcccccccccCC----CCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCC
Q 048790           29 KAQATRLPPGPWKLPLIGNLHQLTG----DSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRP  104 (482)
Q Consensus        29 ~~~~~~~ppgP~~~p~~G~~~~~~~----~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  104 (482)
                      ..++.+.||||+++|++||++.+..    ..++.++.+++++||++|++++|+.++|+++||+++++++.+++..|+.+.
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            3455678999999999999865422    345577899999999999999999999999999999999988776665332


Q ss_pred             ccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhh-hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Q 048790          105 ELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQS-FQAVRNEEVADMIKIIARSSAGPTDLSRLIFLLANN  183 (482)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~  183 (482)
                      ........+  +.++. ..+|+.|+++|+. +.+.|+...++. +.+.+.+.+..+++.|.+  ++.+|+.+.+..++++
T Consensus       113 ~~~~~~~~g--~~~~~-~~~g~~wr~~Rk~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~  186 (490)
T PLN02500        113 PRSIGGILG--KWSML-VLVGDMHRDMRSI-SLNFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFN  186 (490)
T ss_pred             chHHHHHhC--ccccc-ccCCHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHH
Confidence            221122221  22343 4469999999998 678899988887 567777888888887753  4578999999999999


Q ss_pred             HHHHHhhcccccccc-cccCccc----eeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---CCcC
Q 048790          184 IICRVTFGRKYDSEA-DTGTTGF----DIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPK---PEHE  255 (482)
Q Consensus       184 ~i~~~~fG~~~~~~~-~~~~~~~----~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  255 (482)
                      ++++++||.+.++.. ......+    .........++.  ...++..+..+.+.+++. ++++++++..+.+   ....
T Consensus       187 vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~  263 (490)
T PLN02500        187 LMAKHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPG--TAYRKALKSRATILKFIE-RKMEERIEKLKEEDESVEED  263 (490)
T ss_pred             HHHHHHhCCCCCchHHHHHHHHHHHHHhhhhcchhcCCC--cccHHHHHHHHHHHHHHH-HHHHHHHHhhhcccCCCCcc
Confidence            999999998764321 1000000    000000001111  112344455667777777 7776665432211   2346


Q ss_pred             cHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhc-----CCcccc
Q 048790          256 DLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVK-----GREVVE  330 (482)
Q Consensus       256 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~-----~~~~~~  330 (482)
                      |+++.+++.       ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+     +++.++
T Consensus       264 d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~  336 (490)
T PLN02500        264 DLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELN  336 (490)
T ss_pred             hHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCC
Confidence            899998863       15899999999999999999999999999999999999999999999998863     234589


Q ss_pred             ccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCccC
Q 048790          331 ESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSID  410 (482)
Q Consensus       331 ~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~  410 (482)
                      ++|+++|||++|||+||+|++|+++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++.+
T Consensus       337 ~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~  415 (490)
T PLN02500        337 WEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNR  415 (490)
T ss_pred             HHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcc
Confidence            99999999999999999999999998 57999999999999999999999999999999999999999999999975322


Q ss_pred             CC------CCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCC
Q 048790          411 LK------GNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGM  457 (482)
Q Consensus       411 ~~------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~  457 (482)
                      ..      ..+..++|||+|+|.|+|++||++|+++++++|+++|++++.++.
T Consensus       416 ~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~  468 (490)
T PLN02500        416 GGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEAD  468 (490)
T ss_pred             cccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCC
Confidence            11      134579999999999999999999999999999999999987764


No 16 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=8.2e-75  Score=559.16  Aligned_cols=435  Identities=31%  Similarity=0.549  Sum_probs=344.1

Q ss_pred             CCCCCCCCccCcccccccccCCC--CCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchh
Q 048790           32 ATRLPPGPWKLPLIGNLHQLTGD--SPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAA  109 (482)
Q Consensus        32 ~~~~ppgP~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~  109 (482)
                      ....||||.++|++|++..+...  ....++.++..+||++|+.++|+.++++++||+.+++|+.++.......+.+...
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            56678999999999999988544  4556788999999999999999999999999999999996544433333322211


Q ss_pred             hhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHH
Q 048790          110 KIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSSAGP-TDLSRLIFLLANNIICRV  188 (482)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~d~~~~~~~~~~~~i~~~  188 (482)
                       .....|.++++.. |+.|+++||+ +.++|+...++.+...+.+.+..+...+.....+. +|+.+.+.++++|++|.+
T Consensus       113 -~~~~lG~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  113 -LKPWLGDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             -HHHHhcCccccCC-chHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence             1122345776766 9999999998 89999999999999999999988888777654333 999999999999999999


Q ss_pred             hhcccc-ccccccc---Cccc---------eeecc-ccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC---C
Q 048790          189 TFGRKY-DSEADTG---TTGF---------DIFFP-WMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRP---K  251 (482)
Q Consensus       189 ~fG~~~-~~~~~~~---~~~~---------~~~~p-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  251 (482)
                      +||... +.+....   ...+         ....| +..++..+. ..++..++.+.+.+++. ++++++++....   +
T Consensus       190 ~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~-~iI~~rr~~~~~~~~~  267 (497)
T KOG0157|consen  190 AMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLK-SERKLKKARKILHDFLE-KIIRERREELEKEGSG  267 (497)
T ss_pred             hcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcc-hHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCc
Confidence            999222 2111111   0111         11445 333333222 56677788888899998 888877753221   1


Q ss_pred             --CCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCcc-
Q 048790          252 --PEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREV-  328 (482)
Q Consensus       252 --~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~-  328 (482)
                        ....|+++.+.... +    ..+++++|++++.++++||+||||++++|++++|+.||++|+|+++|+.++++.... 
T Consensus       268 ~~~~~~d~L~~~~~~~-~----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~  342 (497)
T KOG0157|consen  268 EEKKRLDFLDTLLLEE-D----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDK  342 (497)
T ss_pred             ccchhhhHHHHHHHhc-c----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCC
Confidence              34567777532221 1    379999999999999999999999999999999999999999999999999874332 


Q ss_pred             ccccccccchhHHHHHHHhhccCCCCCCCCcccccccccc-cceeeCCCCEEEEehhhhccCCCCCC-CCCCCCCCcccc
Q 048790          329 VEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRV-GEYEIPSGTRVLINAKAIATDPEHWE-HPFEFRPERFLN  406 (482)
Q Consensus       329 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~f~P~R~l~  406 (482)
                      ++..+.++|+||++||+|||||||++|. ..|.+.+|+++ +||.||||+.|.++++++||||++|+ ||++|+||||++
T Consensus       343 ~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~  421 (497)
T KOG0157|consen  343 WEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLD  421 (497)
T ss_pred             CChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCC
Confidence            3333344699999999999999999998 56999999999 58999999999999999999999995 999999999997


Q ss_pred             CccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCCC
Q 048790          407 SSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPSL  482 (482)
Q Consensus       407 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  482 (482)
                      ++.....++++|+|||+|+|.|+|++||++|+|+++++++++|++++..+..     ......++++|++|+.|++
T Consensus       422 ~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~  492 (497)
T KOG0157|consen  422 GEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKL  492 (497)
T ss_pred             CCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEEE
Confidence            5433234578999999999999999999999999999999999999987753     3446789999999998764


No 17 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.6e-74  Score=558.43  Aligned_cols=450  Identities=19%  Similarity=0.263  Sum_probs=344.3

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccE
Q 048790            1 MISQFFFLLLLITTSSFVLILLIKQKTSKAQATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPT   80 (482)
Q Consensus         1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~   80 (482)
                      ||++++.++++.+.+..++.++   ....+...+.||||+++|++||++.+ ..+...++.+++++||++|++++|+.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~   76 (463)
T PLN02774          1 VLLVVLGVLVIIVCLCSALLRW---NEVRYSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPT   76 (463)
T ss_pred             CeEEehhHHHHHHHHHHHHHHH---HhhccCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCe
Confidence            4444444444444333333332   22333445678999999999999887 3455678999999999999999999999


Q ss_pred             EEeeCHHHHHHHHHhccccccCCCccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhh-hHHHHHHHHHHH
Q 048790           81 LVISSADVARDIFRTHDLIFSGRPELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQS-FQAVRNEEVADM  159 (482)
Q Consensus        81 vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l  159 (482)
                      ++|+||+++++++.++...+...........+   +.+.++..+|+.|+++|+. +.+.|++..++. +.+.+.+.++++
T Consensus        77 v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~l---g~~~~~~~~g~~w~~~R~~-l~~~~~~~~~~~~~~~~~~~~~~~~  152 (463)
T PLN02774         77 IVSMDPELNRYILMNEGKGLVPGYPQSMLDIL---GTCNIAAVHGSTHRYMRGS-LLSLISPTMIRDHLLPKIDEFMRSH  152 (463)
T ss_pred             EEEeCHHHHHHHHcCCCCeEEecCCHHHHHHh---CccchhhcCCHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998766555322211111222   2223344569999999998 678899998876 789999888888


Q ss_pred             HHHHHHhcCCCccHHHHHHHHHHHHHHHHhhcccccccccccCccc------eeeccccccccchhcHHHHHHHHHHHHH
Q 048790          160 IKIIARSSAGPTDLSRLIFLLANNIICRVTFGRKYDSEADTGTTGF------DIFFPWMGWLDKFNGREARVMKIFRELD  233 (482)
Q Consensus       160 ~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~------~~~~p~~~~l~~~~~~~~~~~~~~~~~~  233 (482)
                      ++.|..  ++.+|+.+.+..++++++++++||.+.....+.....+      ...+|.  +++.  ...++..++.+.+.
T Consensus       153 ~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~lp~--~~~~~~~~~~~~~~  226 (463)
T PLN02774        153 LSGWDG--LKTIDIQEKTKEMALLSALKQIAGTLSKPISEEFKTEFFKLVLGTLSLPI--DLPG--TNYRSGVQARKNIV  226 (463)
T ss_pred             HHhhCC--CCCEEeeHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcccccCCc--CCCC--hhhhHHHHHHHHHH
Confidence            888753  45799999999999999999999976543211100000      001111  1211  12344556677778


Q ss_pred             HHHHHHHHHHHhCCCCCCCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHH
Q 048790          234 RFYDEEILQQHLDPRRPKPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMR  313 (482)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~  313 (482)
                      +++. +.++++.+..   ...+|+++.++....+   +..++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       227 ~~~~-~~i~~r~~~~---~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~  299 (463)
T PLN02774        227 RMLR-QLIQERRASG---ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQ  299 (463)
T ss_pred             HHHH-HHHHHHHhcC---CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHH
Confidence            8887 7777766432   2357999999874322   2258999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcC---CccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCC
Q 048790          314 RAQNEVRGVVKG---REVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDP  390 (482)
Q Consensus       314 ~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~  390 (482)
                      |+++|++++.+.   ++.++++++++|||++|||+||+|++|+++. .+|.+.+|++++||.||||+.|+++.+++||||
T Consensus       300 kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp  378 (463)
T PLN02774        300 ELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDP  378 (463)
T ss_pred             HHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCc
Confidence            999999999753   3468999999999999999999999999986 569999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCccccCccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCc
Q 048790          391 EHWEHPFEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGM  470 (482)
Q Consensus       391 ~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  470 (482)
                      ++|+||++|+||||++++.+  .. ..++|||+|+|.|||++||.+|++++++.|+++|++++.++.....       ..
T Consensus       379 ~~~~dP~~F~PeRfl~~~~~--~~-~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~-------~~  448 (463)
T PLN02774        379 FLYPDPMTFNPWRWLDKSLE--SH-NYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK-------FP  448 (463)
T ss_pred             ccCCChhccCchhcCCCCcC--CC-ccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc-------CC
Confidence            99999999999999965321  12 3589999999999999999999999999999999999987643111       12


Q ss_pred             ccccCCCCCCCC
Q 048790          471 TMHKKNSSLPSL  482 (482)
Q Consensus       471 ~~~p~~~~~~~~  482 (482)
                      ++.|+|++.+++
T Consensus       449 ~~~p~~g~~~~~  460 (463)
T PLN02774        449 RVEAPNGLHIRV  460 (463)
T ss_pred             CCCCCCCceEEe
Confidence            455889888764


No 18 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=6.9e-73  Score=551.32  Aligned_cols=447  Identities=26%  Similarity=0.506  Sum_probs=336.8

Q ss_pred             cccCCCCCCCCccCcccccccccCCCCCc-HHHHHHHhhh-CCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCcc
Q 048790           29 KAQATRLPPGPWKLPLIGNLHQLTGDSPH-VSLQKLSNEY-GPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPEL  106 (482)
Q Consensus        29 ~~~~~~~ppgP~~~p~~G~~~~~~~~~~~-~~~~~~~~ky-G~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~  106 (482)
                      +......||||+++|++||++++..+.+. .++.++.++| |+||++++|+.++|+|+||+.+++++.+++..|+.++..
T Consensus        35 ~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~  114 (534)
T PLN03018         35 KDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQL  114 (534)
T ss_pred             CCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCc
Confidence            33444578999999999999987433332 3566777776 799999999999999999999999999888878888765


Q ss_pred             chhhhhccCCcceeeCCCChhHHHHHHHHHHhhc-ChhhhhhhHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHH
Q 048790          107 YAAKIFSYNCSNIAFAPYGEYWREIRKIAILELL-GSKRVQSFQAVRNEEVADMIKIIARS--SAGPTDLSRLIFLLANN  183 (482)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~  183 (482)
                      .....++.+..++.+..+|+.|+++|++ +.+.| +......+.+..++++.++++.+.+.  .++++|+.+++..++++
T Consensus       115 ~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  193 (534)
T PLN03018        115 SIMETIGDNYKSMGTSPYGEQFMKMKKV-ITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYA  193 (534)
T ss_pred             hhhhhhccCCCceEecCCCHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHH
Confidence            4443333323356666679999999998 55554 44444555666667788999988753  24579999999999999


Q ss_pred             HHHHHhhcccccccc------cccCccc--------e--eecccc-------ccccch--hcHHHHHHHHHHHHHHHHHH
Q 048790          184 IICRVTFGRKYDSEA------DTGTTGF--------D--IFFPWM-------GWLDKF--NGREARVMKIFRELDRFYDE  238 (482)
Q Consensus       184 ~i~~~~fG~~~~~~~------~~~~~~~--------~--~~~p~~-------~~l~~~--~~~~~~~~~~~~~~~~~~~~  238 (482)
                      ++++++||.++....      ......+        .  ..+|..       .++..+  .+...+.......+.+++. 
T Consensus       194 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-  272 (534)
T PLN03018        194 VTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNN-  272 (534)
T ss_pred             HHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHH-
Confidence            999999999874211      0000000        0  011111       011100  1222333344556677777 


Q ss_pred             HHHHHHhCCCC--CC-CCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHH
Q 048790          239 EILQQHLDPRR--PK-PEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRA  315 (482)
Q Consensus       239 ~~~~~~~~~~~--~~-~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l  315 (482)
                      ++++++++..+  .+ ....|+++.+++...+.+ ...++++++.+++.++++||+|||+.+++|++++|+.||++|+|+
T Consensus       273 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        273 PIIDERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHHHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            77776654221  11 124689999997653321 114899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCC
Q 048790          316 QNEVRGVVKGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEH  395 (482)
Q Consensus       316 ~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  395 (482)
                      ++||+++++.++.++.+++++|||++|||+||+|++|+++...+|.+.+|++++||.|||||.|+++.+++||||++|+|
T Consensus       352 ~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~  431 (534)
T PLN03018        352 LKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKD  431 (534)
T ss_pred             HHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCC
Confidence            99999999877778999999999999999999999999998767999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCccCC-----CCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCc
Q 048790          396 PFEFRPERFLNSSIDL-----KGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGM  470 (482)
Q Consensus       396 p~~f~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~  470 (482)
                      |++|+||||++++.+.     ...+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++..  +++.....+.
T Consensus       432 p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~  509 (534)
T PLN03018        432 PLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDAS  509 (534)
T ss_pred             ccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCccccccc
Confidence            9999999999643211     12345799999999999999999999999999999999999876531  2223223344


Q ss_pred             ccccCCCCCCC
Q 048790          471 TMHKKNSSLPS  481 (482)
Q Consensus       471 ~~~p~~~~~~~  481 (482)
                      +..| +|+.++
T Consensus       510 ~~~p-~~~~v~  519 (534)
T PLN03018        510 LLMA-KPLLLS  519 (534)
T ss_pred             eecC-CCeEEE
Confidence            4444 565543


No 19 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.3e-73  Score=549.82  Aligned_cols=447  Identities=22%  Similarity=0.329  Sum_probs=350.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEE
Q 048790            3 SQFFFLLLLITTSSFVLILLIKQKTSKAQATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLV   82 (482)
Q Consensus         3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vv   82 (482)
                      |.++++++++.+.++++..+...+.......+.||||+++|++||++.+..++++.++.+++++||+++++++++.++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~   83 (463)
T PLN02196          4 SALFLTLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVM   83 (463)
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEE
Confidence            45555665555554444444443444455567789999999999998765677888999999999999999999999999


Q ss_pred             eeCHHHHHHHHHhccccccCCCccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHH
Q 048790           83 ISSADVARDIFRTHDLIFSGRPELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKI  162 (482)
Q Consensus        83 v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~  162 (482)
                      ++||+++++++.++...+.  +.......... +...++..+|+.|+++||. +.+.|++.+++.+.+.+.+.++++++.
T Consensus        84 v~~p~~~~~vl~~~~~~~~--~~~~~~~~~~~-g~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~~~~~  159 (463)
T PLN02196         84 ISSPEAAKFVLVTKSHLFK--PTFPASKERML-GKQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVPDIESIAQESLNS  159 (463)
T ss_pred             EcCHHHHHHHHhCCCCccc--ccCchHHHHHc-CcccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999987766553  22221111112 2333455569999999998 778999999999999999999999988


Q ss_pred             HHHhcCCCccHHHHHHHHHHHHHHHHhhccccccccccc---Ccccee---eccccccccchhcHHHHHHHHHHHHHHHH
Q 048790          163 IARSSAGPTDLSRLIFLLANNIICRVTFGRKYDSEADTG---TTGFDI---FFPWMGWLDKFNGREARVMKIFRELDRFY  236 (482)
Q Consensus       163 l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~---~~~~~~---~~p~~~~l~~~~~~~~~~~~~~~~~~~~~  236 (482)
                      |.   ++.+|+.+++..+++++++.++||.+.....+..   ......   .+|+.  ++.  ...++..++...+.+++
T Consensus       160 ~~---~~~v~~~~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~--~~~~~~~~a~~~~~~~~  232 (463)
T PLN02196        160 WE---GTQINTYQEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPIN--LPG--TLFHKSMKARKELAQIL  232 (463)
T ss_pred             CC---CCeEEeHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhccccc--CCC--ccchHHHHHHHHHHHHH
Confidence            74   3568999999999999999999998753211110   000000   12221  111  11234556667778888


Q ss_pred             HHHHHHHHhCCCCCCCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHH
Q 048790          237 DEEILQQHLDPRRPKPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQ  316 (482)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~  316 (482)
                      . +.++++.+.   .....|+++.+++.   .   .+++++++.++++++++||+|||+++++|++++|++||++|+|++
T Consensus       233 ~-~~i~~~~~~---~~~~~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~  302 (463)
T PLN02196        233 A-KILSKRRQN---GSSHNDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVT  302 (463)
T ss_pred             H-HHHHHHhhc---CCCcccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            7 777766543   12356889888752   1   268999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcC---CccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCC
Q 048790          317 NEVRGVVKG---REVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHW  393 (482)
Q Consensus       317 ~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~  393 (482)
                      +|++++.+.   .+.+++++++++|||+|||+||+|++|+++.. .|.+.+|++++||.|||||.|+++.+++||||++|
T Consensus       303 ~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~  381 (463)
T PLN02196        303 EEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIF  381 (463)
T ss_pred             HHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhc
Confidence            999988753   35688999999999999999999999999985 49999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccccCccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccc
Q 048790          394 EHPFEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMH  473 (482)
Q Consensus       394 ~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  473 (482)
                      +||++|+||||+++.     .+..++|||.|+|.|+|+++|++|++++++.|+++|++++.+++.  .  .  ....+..
T Consensus       382 ~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~--~--~--~~~~~~~  450 (463)
T PLN02196        382 SDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN--G--I--QYGPFAL  450 (463)
T ss_pred             CCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC--c--e--EEccccc
Confidence            999999999999632     245799999999999999999999999999999999999876532  1  2  2233456


Q ss_pred             cCCCCCCCC
Q 048790          474 KKNSSLPSL  482 (482)
Q Consensus       474 p~~~~~~~~  482 (482)
                      |++++.+++
T Consensus       451 p~~~~~~~~  459 (463)
T PLN02196        451 PQNGLPIAL  459 (463)
T ss_pred             CCCCceEEE
Confidence            888877653


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.1e-73  Score=559.40  Aligned_cols=436  Identities=33%  Similarity=0.583  Sum_probs=348.2

Q ss_pred             CCCCccCcccccccccCC-CCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhh--h
Q 048790           36 PPGPWKLPLIGNLHQLTG-DSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKI--F  112 (482)
Q Consensus        36 ppgP~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~--~  112 (482)
                      ||||+++|++||++.+.. +.++.++.++++|||+||++++++.++++|+||+++++|+.++...++.++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            799999999999999853 6677889999999999999999999999999999999999988766665533222221  1


Q ss_pred             ccCCcceeeCCCChhHHHHHHHHHHhhcChh-hhhhhHHHHHHHHHHHHHHHHHhcCC--CccHHHHHHHHHHHHHHHHh
Q 048790          113 SYNCSNIAFAPYGEYWREIRKIAILELLGSK-RVQSFQAVRNEEVADMIKIIARSSAG--PTDLSRLIFLLANNIICRVT  189 (482)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~--~~d~~~~~~~~~~~~i~~~~  189 (482)
                      ...+.++.+ .+++.|+.+|+. +.+.|+.. .+ .+.+.+++.++.+++.+.+..+.  .+|+.++++.++++++++++
T Consensus        81 ~~~~~~l~~-~~~~~~~~~R~~-~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGGKGLFF-SDGERWRRQRRL-LAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTTTSSTT-SSHHHHHHHHHH-HHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccc-cccccccccccc-ccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            223444444 447999999998 67778777 66 89999999999999999887543  59999999999999999999


Q ss_pred             hccccccccc-----------ccCcc-------ceeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 048790          190 FGRKYDSEAD-----------TGTTG-------FDIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPK  251 (482)
Q Consensus       190 fG~~~~~~~~-----------~~~~~-------~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (482)
                      ||.+++...+           .....       ....+|++.+++  ....+...++.+.+.+++. .+++++.+..+.+
T Consensus       158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~  234 (463)
T PF00067_consen  158 FGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIK-EIIEERREELDDG  234 (463)
T ss_dssp             HSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHH-HHHHHHHHSHHSS
T ss_pred             ccceeeecccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccc-ccccccccccccc
Confidence            9998652211           11000       111344433332  2344455566677888887 7777777654433


Q ss_pred             -CCcCcHHHHHHHhh-cccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCccc
Q 048790          252 -PEHEDLVDVLVRIQ-KDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREVV  329 (482)
Q Consensus       252 -~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~  329 (482)
                       ....|+++.++... ...+ +..++++++.++++.+++||+|||+.+++|++++|++||++|+++++||+++.+.++.+
T Consensus       235 ~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  313 (463)
T PF00067_consen  235 DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREI  313 (463)
T ss_dssp             SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSH
T ss_pred             cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             45789999999876 2221 13799999999999999999999999999999999999999999999999999766789


Q ss_pred             cccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCcc
Q 048790          330 EESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSI  409 (482)
Q Consensus       330 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~  409 (482)
                      +.+++++||||+|||+||+|++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++.+.
T Consensus       314 ~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~  393 (463)
T PF00067_consen  314 TFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG  393 (463)
T ss_dssp             HHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999667899999999999999999999999999999999999999999999998754


Q ss_pred             CCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          410 DLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       410 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      ........++|||.|+|.|||++||++|+++++++||++||++++++.....   .........|..++.|+
T Consensus       394 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  462 (463)
T PF00067_consen  394 ISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP---QEQQNGFLLPPKPLKVK  462 (463)
T ss_dssp             TBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE---EECSCSSSEEESSSEEE
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC---ccccCceEeeCCCcEEe
Confidence            2233566799999999999999999999999999999999999987654222   11222455555565554


No 21 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.7e-72  Score=506.02  Aligned_cols=433  Identities=23%  Similarity=0.362  Sum_probs=348.6

Q ss_pred             cCCCCCCCCccCcccccccccC---CCCCcHHHHHHHhhhCCcEEEe-cCCccEEEeeCHHHHHHHHHhccccccCCC-c
Q 048790           31 QATRLPPGPWKLPLIGNLHQLT---GDSPHVSLQKLSNEYGPLMFLQ-LGSLPTLVISSADVARDIFRTHDLIFSGRP-E  105 (482)
Q Consensus        31 ~~~~~ppgP~~~p~~G~~~~~~---~~~~~~~~~~~~~kyG~v~~~~-~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~-~  105 (482)
                      .+...+|+|+.+|++|.++.+.   ..+.++....+++|||+||+.. +|+...|.+.||++++.+|...+. ...|+ .
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~  125 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLL  125 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccc
Confidence            3445679999999999998542   3566778889999999999999 888999999999999999986553 34453 1


Q ss_pred             cc---hhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhcC-----CCccHHHHH
Q 048790          106 LY---AAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARSSA-----GPTDLSRLI  177 (482)
Q Consensus       106 ~~---~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-----~~~d~~~~~  177 (482)
                      ..   .++-.. ++...++...|++|.+.|..+....+++++++.|.+.+++.+++++..++...+     .+.|+.+.+
T Consensus       126 ~~~w~~~rd~~-~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l  204 (519)
T KOG0159|consen  126 IEPWVAYRDFR-GGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQEL  204 (519)
T ss_pred             cchhhhhHHhh-ccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHH
Confidence            11   122222 233445556699999999998888899999999999999999999999876532     357999999


Q ss_pred             HHHHHHHHHHHhhcccccccccc-------cC----ccce----e-ec-cccccccchhcHHHHHHHHHHHHHHHHHHHH
Q 048790          178 FLLANNIICRVTFGRKYDSEADT-------GT----TGFD----I-FF-PWMGWLDKFNGREARVMKIFRELDRFYDEEI  240 (482)
Q Consensus       178 ~~~~~~~i~~~~fG~~~~~~~~~-------~~----~~~~----~-~~-p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  240 (482)
                      .+++++.||.++||..++...+.       ..    ..|.    . +. +++++++  ++.+++..++.+.+.++.. +.
T Consensus       205 ~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~--t~~wk~~~~~~D~i~~~~~-~~  281 (519)
T KOG0159|consen  205 YRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFP--TKVWKDFVRAWDQIFDVGD-KY  281 (519)
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCC--ChHHHHHHHHHHHHHHHHH-HH
Confidence            99999999999999998743321       00    0111    1 22 3444443  4577788788887777776 66


Q ss_pred             HHHHhCCCCC----CCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHH
Q 048790          241 LQQHLDPRRP----KPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQ  316 (482)
Q Consensus       241 ~~~~~~~~~~----~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~  316 (482)
                      |++..+..+.    +.+....+..++..       +.++.+++..+++++++||.||||.+++|+||.|++||++|++|+
T Consensus       282 Id~~l~~l~~~~~~~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  282 IDNALEELEKQDSAGSEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHHHHhccccccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            6555543221    12223333333321       257899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcC-CccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCC
Q 048790          317 NEVRGVVKG-REVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEH  395 (482)
Q Consensus       317 ~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~  395 (482)
                      +|+.+++.. +..++.+++.++|||.||||||+||||.++.. .|...+|.+++||.|||||.|.++.+.+.+||++|++
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~  433 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPD  433 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCCC
Confidence            999999876 57789999999999999999999999999985 5999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccCccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccC
Q 048790          396 PFEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKK  475 (482)
Q Consensus       396 p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~  475 (482)
                      |++|+|||||+++. ...+++.++|||+|+|+|+|+++|++|+-++||+|+++|+++..++.+     +.....+++.|.
T Consensus       434 p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~p-----v~~~~~~il~P~  507 (519)
T KOG0159|consen  434 PEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEP-----VEYVYRFILVPN  507 (519)
T ss_pred             ccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCC-----ccceeEEEEcCC
Confidence            99999999998763 345789999999999999999999999999999999999999877532     556778888998


Q ss_pred             CCCCCCC
Q 048790          476 NSSLPSL  482 (482)
Q Consensus       476 ~~~~~~~  482 (482)
                      .|+..+|
T Consensus       508 ~~l~f~f  514 (519)
T KOG0159|consen  508 RPLRFKF  514 (519)
T ss_pred             CCcceee
Confidence            8887654


No 22 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.3e-71  Score=546.07  Aligned_cols=433  Identities=21%  Similarity=0.340  Sum_probs=325.4

Q ss_pred             CCCCccCcccccccccCCCCCcHHHHHHHhhh---CCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhhh
Q 048790           36 PPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEY---GPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKIF  112 (482)
Q Consensus        36 ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~  112 (482)
                      +|||+++|++||++.+.. . +..+.+|.++|   |++|++++|+.++++++||+.+++|+.++...+...+..... ..
T Consensus        32 ~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~-~~  108 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK-N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSY-ME  108 (516)
T ss_pred             cCCCCCCCeecchHHHHh-c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHH-HH
Confidence            689999999999877633 2 34567777777   899999999999999999999999998754445433221101 00


Q ss_pred             ccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHH-HHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHHHh
Q 048790          113 SYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVR-NEEVADMIKIIARS--SAGPTDLSRLIFLLANNIICRVT  189 (482)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~-~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~  189 (482)
                      ...+.+ +++.+|+.|+++||. +.+.|+..+++.+.+.+ .+.++.+++.+.+.  .++.+|+.+++..+++|+++.++
T Consensus       109 ~~~g~~-l~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        109 VLLGDG-IFNVDGELWRKQRKT-ASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             HHhcCe-eeccCcHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence            112344 455679999999998 78899999999999876 56677777777542  35679999999999999999999


Q ss_pred             hcccccccccc-----cCccce---------eeccccccccch-hcHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----
Q 048790          190 FGRKYDSEADT-----GTTGFD---------IFFPWMGWLDKF-NGREARVMKIFRELDRFYDEEILQQHLDPRR-----  249 (482)
Q Consensus       190 fG~~~~~~~~~-----~~~~~~---------~~~p~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  249 (482)
                      ||.+++...+.     ....+.         ...|++.....+ ....+...+....+.+++. +.++++.+...     
T Consensus       187 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~  265 (516)
T PLN03195        187 FGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTY-SVIRRRKAEMDEARKS  265 (516)
T ss_pred             hCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHH-HHHHHHHHHHhccccc
Confidence            99987643211     000000         011211100000 1112333445666777777 66666543211     


Q ss_pred             CCCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcC----
Q 048790          250 PKPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKG----  325 (482)
Q Consensus       250 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~----  325 (482)
                      .....+|+++.+++...+.  +..++++++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.    
T Consensus       266 ~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        266 GKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence            1123568999999754322  2368999999999999999999999999999999999999999999999987642    


Q ss_pred             ----------------CccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccc-cceeeCCCCEEEEehhhhcc
Q 048790          326 ----------------REVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRV-GEYEIPSGTRVLINAKAIAT  388 (482)
Q Consensus       326 ----------------~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~  388 (482)
                                      ++.++++++++||||+|||+||||++|+++.. +|.+.+|.++ +||.|||||.|.++.+++||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~  422 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGR  422 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhcc
Confidence                            24578999999999999999999999999985 5767777665 99999999999999999999


Q ss_pred             CCCCC-CCCCCCCCCccccCccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccC
Q 048790          389 DPEHW-EHPFEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEA  467 (482)
Q Consensus       389 d~~~~-~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  467 (482)
                      ||++| +||++|+||||++++......+..|+|||+|+|+|+|++||++|++++++.|+++|++++.++.+     ....
T Consensus       423 dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~~  497 (516)
T PLN03195        423 MEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHP-----VKYR  497 (516)
T ss_pred             ChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCc-----ceee
Confidence            99999 99999999999964321122445799999999999999999999999999999999999876542     1222


Q ss_pred             CCcccccCCCCCCCC
Q 048790          468 PGMTMHKKNSSLPSL  482 (482)
Q Consensus       468 ~~~~~~p~~~~~~~~  482 (482)
                      ...+..|++++.|++
T Consensus       498 ~~~~~~~~~~~~v~~  512 (516)
T PLN03195        498 MMTILSMANGLKVTV  512 (516)
T ss_pred             eeeEEecCCCEEEEE
Confidence            345678888877653


No 23 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.9e-71  Score=539.39  Aligned_cols=430  Identities=18%  Similarity=0.330  Sum_probs=323.4

Q ss_pred             CCCCccCcccccccccCCCCC--cHHHHHHHhhhCCcEE---EecCCccEEEeeCHHHHHHHHHhccccccCCCccchhh
Q 048790           36 PPGPWKLPLIGNLHQLTGDSP--HVSLQKLSNEYGPLMF---LQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAK  110 (482)
Q Consensus        36 ppgP~~~p~~G~~~~~~~~~~--~~~~~~~~~kyG~v~~---~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~  110 (482)
                      .|||+++|++||+..+.....  .+++.+..++||..++   +++|+.++++|+||+.+++|+.++...|.+++....  
T Consensus        33 ~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~--  110 (500)
T PLN02169         33 QPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK--  110 (500)
T ss_pred             CCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH--
Confidence            478889999999977643322  2333344445886655   678999999999999999999887666665432211  


Q ss_pred             hhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhh--HHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHH
Q 048790          111 IFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSF--QAVRNEEVADMIKIIARS--SAGPTDLSRLIFLLANNIIC  186 (482)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~--~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i~  186 (482)
                      .....+.++.+ .+|+.|+++||. +.++|+...+..+  .+.+.+.++.+++.+++.  .+..+|+.+.+.++++|+++
T Consensus       111 ~~~~~g~gl~~-~~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~  188 (500)
T PLN02169        111 IFDVLGEGILT-VDFELWEDLRKS-NHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSS  188 (500)
T ss_pred             HHHhhcCcccc-cCcHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHH
Confidence            11222455544 459999999998 7899998877643  366667778888887653  35679999999999999999


Q ss_pred             HHhhccccccccc-ccCccc-------------eeecccccc-cc-ch-hcHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 048790          187 RVTFGRKYDSEAD-TGTTGF-------------DIFFPWMGW-LD-KF-NGREARVMKIFRELDRFYDEEILQQHLDPRR  249 (482)
Q Consensus       187 ~~~fG~~~~~~~~-~~~~~~-------------~~~~p~~~~-l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (482)
                      +++||.+.+.... .....+             ..+.|++.+ +. .+ .+..++..+..+.+.+++. ++++++++...
T Consensus       189 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~I~~r~~~~~  267 (500)
T PLN02169        189 ILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFA-KIISSRRKEEI  267 (500)
T ss_pred             hheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHH-HHHHHHHHHhh
Confidence            9999987653221 000000             012243221 11 11 1234556677778888888 77777654311


Q ss_pred             -C---CCCcCcHHHHHHHhhccc-ccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhc
Q 048790          250 -P---KPEHEDLVDVLVRIQKDS-SQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVK  324 (482)
Q Consensus       250 -~---~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~  324 (482)
                       .   ....+|+++.+++...+. ..+..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++ 
T Consensus       268 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~-  346 (500)
T PLN02169        268 SRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF-  346 (500)
T ss_pred             ccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC-
Confidence             1   112468999998754221 1112478899999999999999999999999999999999999999999999863 


Q ss_pred             CCccccccccccchhHHHHHHHhhccCCCCCCCCccccccccc-ccceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCC
Q 048790          325 GREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCR-VGEYEIPSGTRVLINAKAIATDPEHW-EHPFEFRPE  402 (482)
Q Consensus       325 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~-~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~P~  402 (482)
                           +++++++||||+||++||||++|++|... |.+.+|.+ ++||.|||||.|.++++++||||++| +||++|+||
T Consensus       347 -----~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~Pe  420 (500)
T PLN02169        347 -----DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPE  420 (500)
T ss_pred             -----CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCcc
Confidence                 67899999999999999999999999865 77666655 49999999999999999999999999 899999999


Q ss_pred             ccccCccCCC-CCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          403 RFLNSSIDLK-GNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       403 R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      ||++++.+.. ..+..|+|||+|+|+|+|++||++|+++++++|+++|+++++++..     .....+++++|++|+.++
T Consensus       421 Rfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~l~  495 (500)
T PLN02169        421 RWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHK-----IEAIPSILLRMKHGLKVT  495 (500)
T ss_pred             ccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCC-----cccccceEEecCCCEEEE
Confidence            9997543221 1356799999999999999999999999999999999999876542     233456889999998775


Q ss_pred             C
Q 048790          482 L  482 (482)
Q Consensus       482 ~  482 (482)
                      +
T Consensus       496 l  496 (500)
T PLN02169        496 V  496 (500)
T ss_pred             E
Confidence            3


No 24 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.5e-71  Score=536.67  Aligned_cols=424  Identities=21%  Similarity=0.315  Sum_probs=331.1

Q ss_pred             cccCCCCCCCCccCcccccccccCC----CCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCC
Q 048790           29 KAQATRLPPGPWKLPLIGNLHQLTG----DSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRP  104 (482)
Q Consensus        29 ~~~~~~~ppgP~~~p~~G~~~~~~~----~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~  104 (482)
                      +.++.+.||||.++|++||++.+..    .+++.++.+++++||+||++++|+.++++++||++++++|.+++..++.+.
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            3456778999999999999988732    357788999999999999999999999999999999999998777676543


Q ss_pred             ccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhh-hHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Q 048790          105 ELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQS-FQAVRNEEVADMIKIIARSSAGPTDLSRLIFLLANN  183 (482)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~  183 (482)
                      ........   +.+.++..+|+.|+++|++ +.+.|+...+.. +.+.+.+.+.++++.+..  ++.+|+.+.+..++++
T Consensus        82 ~~~~~~l~---g~~~~~~~~g~~wr~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  155 (452)
T PLN03141         82 PKSLTELM---GKSSILLINGSLQRRVHGL-IGAFLKSPHLKAQITRDMERYVSESLDSWRD--DPPVLVQDETKKIAFE  155 (452)
T ss_pred             chhHHHHh---CcccccccCcHHHHHHHHH-HHHhcCcHHHHHHHHHHHHHHHHHHHHhccC--CCCEEhHHHHHHHHHH
Confidence            22222222   2233445569999999998 677887777765 356666777767666532  4678999999999999


Q ss_pred             HHHHHhhcccccccccccCccce------eeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-----
Q 048790          184 IICRVTFGRKYDSEADTGTTGFD------IFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPKP-----  252 (482)
Q Consensus       184 ~i~~~~fG~~~~~~~~~~~~~~~------~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  252 (482)
                      ++++++||.+.+.........+.      ..+|.  +++.  ....+..++.+.+.+++. ++++++++..+.+.     
T Consensus       156 vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~--~~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~  230 (452)
T PLN03141        156 VLVKALISLEPGEEMEFLKKEFQEFIKGLMSLPI--KLPG--TRLYRSLQAKKRMVKLVK-KIIEEKRRAMKNKEEDETG  230 (452)
T ss_pred             HHHHHHcCCCchHHHHHHHHHHHHHhhhHHhCcc--CCCc--hHhHHHHHHHHHHHHHHH-HHHHHHHHHHhccCccccC
Confidence            99999999876432211100000      01121  1111  122334456677788887 77776664332111     


Q ss_pred             CcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhc----CCcc
Q 048790          253 EHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVK----GREV  328 (482)
Q Consensus       253 ~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~----~~~~  328 (482)
                      ...|+++.+++..  +   ..++++++..+++++++||+|||+.+++|++++|++||++|+++++|++++.+    .++.
T Consensus       231 ~~~d~l~~ll~~~--~---~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~  305 (452)
T PLN03141        231 IPKDVVDVLLRDG--S---DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEP  305 (452)
T ss_pred             ChhhHHHHHHhcC--C---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCC
Confidence            2468999988753  1   25899999999999999999999999999999999999999999999988753    2345


Q ss_pred             ccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCc
Q 048790          329 VEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSS  408 (482)
Q Consensus       329 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~  408 (482)
                      ++++++.+||||+|||+|++|++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++++
T Consensus       306 ~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~  384 (452)
T PLN03141        306 LYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKD  384 (452)
T ss_pred             CCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCC
Confidence            7899999999999999999999999985 679999999999999999999999999999999999999999999999753


Q ss_pred             cCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          409 IDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       409 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      .    .+..|+|||+|+|.|+|++||.+|+++++|+|+++|++++.++..   .     ...+++|++++.|+
T Consensus       385 ~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~---~-----~~~~~~~~~~~~~~  445 (452)
T PLN03141        385 M----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI---V-----NFPTVRMKRKLPIW  445 (452)
T ss_pred             C----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe---e-----ecccccCCCCceEE
Confidence            2    345799999999999999999999999999999999999876531   1     12477888887764


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.7e-70  Score=537.28  Aligned_cols=430  Identities=21%  Similarity=0.347  Sum_probs=332.7

Q ss_pred             cccCCCCCCCCccCcccccccccC----CCCCcHHHHHHHhhhCC--cEEEecCCccEEEeeCHHHHHHHHHhccccccC
Q 048790           29 KAQATRLPPGPWKLPLIGNLHQLT----GDSPHVSLQKLSNEYGP--LMFLQLGSLPTLVISSADVARDIFRTHDLIFSG  102 (482)
Q Consensus        29 ~~~~~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~  102 (482)
                      .....+.||||+++|++|+++++.    ..+++.++.++++|||+  +|++++++.++++++||+++++|+.+++ .|..
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-cccc
Confidence            344557899999999999988763    34677889999999997  7999999999999999999999998654 3433


Q ss_pred             CCccchhhhhccCCcceeeCCCChhHHHHHHHHHHhhc-ChhhhhhhHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Q 048790          103 RPELYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELL-GSKRVQSFQAVRNEEVADMIKIIARSSAGPTDLSRLIFLLA  181 (482)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~  181 (482)
                      +.........   +.+.....+|+.|+++||. +.+.| +++.++.+.+.+.+.+.++++.+..  ++.+|+.+++..++
T Consensus       116 ~~~~~~~~~~---g~~~~~~~~g~~w~~~R~~-~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~  189 (490)
T PLN02302        116 GWPESTVELI---GRKSFVGITGEEHKRLRRL-TAAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLT  189 (490)
T ss_pred             CCchhHHHHh---ccccccccCcHHHHHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHH
Confidence            3221111211   2333444569999999998 66777 5778999999999999999998864  45699999999999


Q ss_pred             HHHHHHHhhcccccccccccCcccee---ec-cccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCcC
Q 048790          182 NNIICRVTFGRKYDSEADTGTTGFDI---FF-PWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPK--PEHE  255 (482)
Q Consensus       182 ~~~i~~~~fG~~~~~~~~~~~~~~~~---~~-p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  255 (482)
                      ++++++++||.+++...+.....+..   .+ .....++.  ....+..+..+.+.+++. +.++++.+....+  ....
T Consensus       190 ~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~l~~~~~-~~i~~~~~~~~~~~~~~~~  266 (490)
T PLN02302        190 FKIIMYIFLSSESELVMEALEREYTTLNYGVRAMAINLPG--FAYHRALKARKKLVALFQ-SIVDERRNSRKQNISPRKK  266 (490)
T ss_pred             HHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCc--hhhHHHHHHHHHHHHHHH-HHHHHHHHhhhccCCCCcC
Confidence            99999999998865322111110100   00 00001111  112233445566777777 6666665432211  2457


Q ss_pred             cHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCC----ccccc
Q 048790          256 DLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGR----EVVEE  331 (482)
Q Consensus       256 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~----~~~~~  331 (482)
                      |+++.+++...+++  ..++++++.++++.+++||+|||+.+++|++++|++||++|+|+++|++++.+..    ..+++
T Consensus       267 d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~  344 (490)
T PLN02302        267 DMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTL  344 (490)
T ss_pred             CHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence            99999998654332  3589999999999999999999999999999999999999999999999987532    13789


Q ss_pred             cccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCccCC
Q 048790          332 SDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSIDL  411 (482)
Q Consensus       332 ~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~  411 (482)
                      +++++||||+|||+|++|++|+++. .+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.+   
T Consensus       345 ~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~---  420 (490)
T PLN02302        345 KDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT---  420 (490)
T ss_pred             HHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC---
Confidence            9999999999999999999999997 469999999999999999999999999999999999999999999999643   


Q ss_pred             CCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          412 KGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       412 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                       ..+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++..    ...  ...++.|++++.++
T Consensus       421 -~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~----~~~--~~~~~~p~~~~~~~  483 (490)
T PLN02302        421 -PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC----KVM--YLPHPRPKDNCLAR  483 (490)
T ss_pred             -CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC----cce--eCCCCCCCCCceEE
Confidence             1345789999999999999999999999999999999999875431    111  12237777776554


No 26 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=5e-70  Score=524.49  Aligned_cols=422  Identities=19%  Similarity=0.283  Sum_probs=327.1

Q ss_pred             ccCCCCCCCCccCcccccccccC----CCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCc
Q 048790           30 AQATRLPPGPWKLPLIGNLHQLT----GDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPE  105 (482)
Q Consensus        30 ~~~~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~  105 (482)
                      ..+...||||.++|++||++++.    ..++..++.+++++||+++++++++.++++|+||+.+++++.++...|..+..
T Consensus        26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~  105 (472)
T PLN02987         26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP  105 (472)
T ss_pred             cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence            44456789999999999998863    24567788999999999999999999999999999999999987776754432


Q ss_pred             cchhhhhccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHH-HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHH
Q 048790          106 LYAAKIFSYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQA-VRNEEVADMIKIIARSSAGPTDLSRLIFLLANNI  184 (482)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~  184 (482)
                      ......+  ++.++.++ +|+.|+++|++ ..++++...++.+.. .+.+.+...++.|.    +++++.+.+.++++++
T Consensus       106 ~~~~~~l--g~~~l~~~-~g~~wr~~R~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~t~~v  177 (472)
T PLN02987        106 GSISNLL--GKHSLLLM-KGNLHKKMHSL-TMSFANSSIIKDHLLLDIDRLIRFNLDSWS----SRVLLMEEAKKITFEL  177 (472)
T ss_pred             HHHHHHh--Cccccccc-CcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHhhc----cceehHHHHHHHHHHH
Confidence            2222222  22344444 69999999998 555545445544432 12333333444442    4689999999999999


Q ss_pred             HHHHhhcccccccccc-------cCccc-eeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC-CCcC
Q 048790          185 ICRVTFGRKYDSEADT-------GTTGF-DIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPK-PEHE  255 (482)
Q Consensus       185 i~~~~fG~~~~~~~~~-------~~~~~-~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  255 (482)
                      +++++||.+.++..+.       ....+ ...+|++      ....++..+..+.+.+++. +.++++.+....+ ...+
T Consensus       178 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l------~~~~~~~~~~~~~~~~~~~-~~i~~r~~~~~~~~~~~~  250 (472)
T PLN02987        178 TVKQLMSFDPGEWTESLRKEYVLVIEGFFSVPLPLF------STTYRRAIQARTKVAEALT-LVVMKRRKEEEEGAEKKK  250 (472)
T ss_pred             HHHHHcCCCChHHHHHHHHHHHHHHhhhhcCCCcCC------CchHHHHHHHHHHHHHHHH-HHHHHHHhhhhccCcccc
Confidence            9999999876432211       00011 1122322      2345556677788888888 7887776543222 2357


Q ss_pred             cHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhc---CCcccccc
Q 048790          256 DLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVK---GREVVEES  332 (482)
Q Consensus       256 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~---~~~~~~~~  332 (482)
                      |+++.+++..      .+++++++.++++++++||+|||+.+++|++++|++||++|+++++|++++.+   ..+.++++
T Consensus       251 d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~  324 (472)
T PLN02987        251 DMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWS  324 (472)
T ss_pred             cHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHH
Confidence            8999999652      15899999999999999999999999999999999999999999999999874   23457889


Q ss_pred             ccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCccCCC
Q 048790          333 DISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSIDLK  412 (482)
Q Consensus       333 ~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~  412 (482)
                      ++.+|||++||++||+|++|+++. .+|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++++... 
T Consensus       325 ~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~-  402 (472)
T PLN02987        325 DYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTT-  402 (472)
T ss_pred             HHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCC-
Confidence            999999999999999999999985 569999999999999999999999999999999999999999999999753221 


Q ss_pred             CCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          413 GNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       413 ~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      .....++|||+|+|.|+|++||.+|++++++.|+++|++++.++..   .    ....+++|.+++.++
T Consensus       403 ~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~----~~~~~~~p~~~~~~~  464 (472)
T PLN02987        403 VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK---L----VFFPTTRTQKRYPIN  464 (472)
T ss_pred             CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc---e----eecccccCCCCceEE
Confidence            2235799999999999999999999999999999999999876643   1    113488888887665


No 27 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=8e-70  Score=535.16  Aligned_cols=419  Identities=24%  Similarity=0.414  Sum_probs=319.6

Q ss_pred             ccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhhhccCCcceeeCCCC
Q 048790           46 GNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKIFSYNCSNIAFAPYG  125 (482)
Q Consensus        46 G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (482)
                      ||+..+.++..+..+.++|+|||+||++++|+.++++|+||+.+++||..+...|..++........  .+.++ +..++
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l-~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGL-IPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCce-ecCCc
Confidence            4444454556677899999999999999999999999999999999998766656554322111111  23344 45669


Q ss_pred             hhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHHHhhccccccccc--c-
Q 048790          126 EYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS--SAGPTDLSRLIFLLANNIICRVTFGRKYDSEAD--T-  200 (482)
Q Consensus       126 ~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~--~-  200 (482)
                      +.|+++|+. +.++|+...++.+.+.+.+.++++++.+.+.  .++.+|+.+.+..+++|+|+.++||.+++...+  . 
T Consensus       220 e~wr~rRr~-l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~  298 (633)
T PLN02738        220 EIWRVRRRA-IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGI  298 (633)
T ss_pred             HHHHHHHHh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHH
Confidence            999999998 7899999999999999999999999999764  356899999999999999999999998863211  0 


Q ss_pred             ------cCccc-----eeeccccc-cccchhcHHHHHHHHHHHHHHHHHHHHHHHHhC---CC----CC---CCCcCcHH
Q 048790          201 ------GTTGF-----DIFFPWMG-WLDKFNGREARVMKIFRELDRFYDEEILQQHLD---PR----RP---KPEHEDLV  258 (482)
Q Consensus       201 ------~~~~~-----~~~~p~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~---~~~~~d~l  258 (482)
                            .....     ..+.+|.. .+..++...++..+..+.+.++.. ++++...+   ..    ..   .....|++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~-~li~~~~~~~~~~~~~~~~~~~~~~~~dil  377 (633)
T PLN02738        299 VEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLD-DLIAICKRMVEEEELQFHEEYMNERDPSIL  377 (633)
T ss_pred             HHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhcccchhcccccccchHH
Confidence                  00000     00111211 011111222233333444444443 33332211   10    00   12245788


Q ss_pred             HHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCccccccccccch
Q 048790          259 DVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREVVEESDISELM  338 (482)
Q Consensus       259 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp  338 (482)
                      +.|++..      ..++++++.++++.+++||+|||+.+++|++++|++||++|+||++|++++++ ++.++++++++||
T Consensus       378 ~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLP  450 (633)
T PLN02738        378 HFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLK  450 (633)
T ss_pred             HHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCH
Confidence            8888642      25889999999999999999999999999999999999999999999999987 4668999999999


Q ss_pred             hHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCcc--CCCCCCc
Q 048790          339 YLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSI--DLKGNNF  416 (482)
Q Consensus       339 ~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~--~~~~~~~  416 (482)
                      ||+|||+|+|||+|+++.. +|++.+|.+++||.|||||.|.++.+.+||||++|+||++|+||||+.++.  +......
T Consensus       451 YL~AVIkEtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~  529 (633)
T PLN02738        451 YTTRVINESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNF  529 (633)
T ss_pred             HHHHHHHHHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCC
Confidence            9999999999999999984 599999999999999999999999999999999999999999999985321  1122456


Q ss_pred             eeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          417 ELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       417 ~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      .|+|||.|+|.|+|++||++|++++++.|+++|+|++.++..  +  .....+++..|++++.++
T Consensus       530 ~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~--~~~~~~~~~~p~~~l~v~  590 (633)
T PLN02738        530 SYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--P--VKMTTGATIHTTEGLKMT  590 (633)
T ss_pred             ceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--C--cccccceEEeeCCCcEEE
Confidence            799999999999999999999999999999999999987642  1  222345677788887664


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-69  Score=477.62  Aligned_cols=429  Identities=24%  Similarity=0.366  Sum_probs=344.2

Q ss_pred             CCCCCCc-cCcccccccccCCCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhhh
Q 048790           34 RLPPGPW-KLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKIF  112 (482)
Q Consensus        34 ~~ppgP~-~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~  112 (482)
                      ..||.-+ ++|++|++..| +.++.+++++.++|||+||++.++|+.+.++.+|+....++..+...++... ....-..
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~-~~~~l~~  108 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEE-AYSKLTT  108 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHH-HHHHhhh
Confidence            4667554 58999999999 8999999999999999999999999999999999999999987633332211 1111122


Q ss_pred             ccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHH-HHHhcCCCccHHHHHHHHHHHHHHHHhhc
Q 048790          113 SYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKI-IARSSAGPTDLSRLIFLLANNIICRVTFG  191 (482)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~d~~~~~~~~~~~~i~~~~fG  191 (482)
                      .-.++++....++...-.+.++ ....+....++++.+.|.+++.+.+.. +.+ ++....+.+.++.+++.+.-.++||
T Consensus       109 ~vFg~~v~~d~~~~~~~e~~~~-~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~  186 (486)
T KOG0684|consen  109 PVFGKGVVYDVPNHVMMEQKKF-FKSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGG  186 (486)
T ss_pred             hhcCCCccccCCCchHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhh
Confidence            2335667777777888888887 788899999999999999999998887 444 4666778888888888877777777


Q ss_pred             cccccccc----------ccCccceeeccccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcCcHHHHH
Q 048790          192 RKYDSEAD----------TGTTGFDIFFPWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPKPEHEDLVDVL  261 (482)
Q Consensus       192 ~~~~~~~~----------~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~l  261 (482)
                      ......++          +.+..++..||.  +++  ....++..++.+.+.+.+. ..+.++++..  +...+|+++.+
T Consensus       187 e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~--~LP--~~~~r~~~ra~~~i~k~f~-~~i~~rr~s~--s~~~~dmlq~l  259 (486)
T KOG0684|consen  187 EVRDQLDADVAKLYHDLDQGFQPFDFLFPY--NLP--IPLLRRRDRARKKISKIFS-KIILDRRASI--SKWDNDMLQSL  259 (486)
T ss_pred             hhhhhhcchHHHHHHHHhccccchHhhccc--CCC--cchhhhHHHHHHHHHHHHH-HHHHHHHhcc--ccccHHHHHHH
Confidence            65543221          223334446774  222  1344455577788888888 6676666543  23456899999


Q ss_pred             HHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCcc-ccccccccchhH
Q 048790          262 VRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREV-VEESDISELMYL  340 (482)
Q Consensus       262 l~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~-~~~~~l~~lp~l  340 (482)
                      ++..+++   .+.+++|+++.++.++|||+.||++|.+|++++|++|||+++++++|+++++|.+.. +++|.+++||.|
T Consensus       260 ~~~y~dg---~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL  336 (486)
T KOG0684|consen  260 MEKYKDG---RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLL  336 (486)
T ss_pred             HHHhhcC---CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHH
Confidence            8844433   378999999999999999999999999999999999999999999999999987655 999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCcccccccccccc----eeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCccCCC--CC
Q 048790          341 KLVVKEALRLHPPAPLLVPRETTEDCRVGE----YEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSIDLK--GN  414 (482)
Q Consensus       341 ~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~--~~  414 (482)
                      ++||+|||||+||.+..+ |.+.+|.++.+    |.||+|..|.++++.+|+||++|+||+.|+|+||++++++.+  +.
T Consensus       337 ~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~  415 (486)
T KOG0684|consen  337 DSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGE  415 (486)
T ss_pred             HHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccc
Confidence            999999999999988754 99999999855    999999999999999999999999999999999997654431  22


Q ss_pred             --CceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          415 --NFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       415 --~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                        .+.++|||+|.|.|||+.||.+|++.++..+|++||+++.+|+    ++..+-..+++.|.++|+++
T Consensus       416 kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~----~P~~d~s~~v~~P~g~v~ir  480 (486)
T KOG0684|consen  416 KLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGP----FPEVDYSRMVMQPEGDVRIR  480 (486)
T ss_pred             cccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCC----CCCCCHHHhhcCCCCCceEE
Confidence              2346999999999999999999999999999999999999983    22333345599999999875


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=4.5e-68  Score=516.10  Aligned_cols=429  Identities=25%  Similarity=0.394  Sum_probs=331.4

Q ss_pred             CCCccCcccccccccC----CCCCcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhhh
Q 048790           37 PGPWKLPLIGNLHQLT----GDSPHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKIF  112 (482)
Q Consensus        37 pgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~  112 (482)
                      .|-.+||++|+...+.    .+.++..+.+|+++||+|+++++|+.++++++||+++++|+.+.+..|..++........
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~   94 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL   94 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH
Confidence            5667899999865542    466788899999999999999999999999999999999998765666655432111111


Q ss_pred             ccCCcceeeCCCChhHHHHHHHHHHhhcChhhhhhhHH-HHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHHHh
Q 048790          113 SYNCSNIAFAPYGEYWREIRKIAILELLGSKRVQSFQA-VRNEEVADMIKIIARS--SAGPTDLSRLIFLLANNIICRVT  189 (482)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~-~~~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~~i~~~~  189 (482)
                        .+.++ +..+|+.|+++||. +.+.|+...+..+.+ .+.+.++++++.+.+.  .++++|+.++++.+++++++.++
T Consensus        95 --~~~~i-~~~~g~~wk~~Rk~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         95 --FGSGF-AIAEGELWTARRRA-VVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             --hcCcc-ccCCchHHHHHHHh-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence              23344 44569999999998 788999888888754 7788899999998764  25689999999999999999999


Q ss_pred             hcccccccccc--cCc---------cc--eeecccccc--ccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-----
Q 048790          190 FGRKYDSEADT--GTT---------GF--DIFFPWMGW--LDKFNGREARVMKIFRELDRFYDEEILQQHLDPRR-----  249 (482)
Q Consensus       190 fG~~~~~~~~~--~~~---------~~--~~~~p~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  249 (482)
                      ||.+++.....  ...         ..  ...+|++..  +..+.+..++..++.+.+.+++. +.++++++..+     
T Consensus       171 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~-~~i~~~~~~~~~~~~~  249 (489)
T PLN02936        171 FNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVE-DLVDKCKEIVEAEGEV  249 (489)
T ss_pred             cCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHH-HHHHHHHHHHhhcccc
Confidence            99998643211  000         00  002232210  11111223345556666667766 55555432110     


Q ss_pred             --C----CCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhh
Q 048790          250 --P----KPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVV  323 (482)
Q Consensus       250 --~----~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~  323 (482)
                        .    .....|+++.|+....      .++++++.++++++++||+|||+++++|++++|++||++|+++++|+++++
T Consensus       250 ~~~~~~~~~~~~d~l~~ll~~~~------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~  323 (489)
T PLN02936        250 IEGEEYVNDSDPSVLRFLLASRE------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVL  323 (489)
T ss_pred             cccccccccCchHHHHHHHhccc------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence              0    0124678888886431      478999999999999999999999999999999999999999999999998


Q ss_pred             cCCccccccccccchhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCc
Q 048790          324 KGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLINAKAIATDPEHWEHPFEFRPER  403 (482)
Q Consensus       324 ~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R  403 (482)
                      +. +.++++++++||||+|||+||+|++|+++...+|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       324 ~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR  402 (489)
T PLN02936        324 QG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPER  402 (489)
T ss_pred             cC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccc
Confidence            74 45789999999999999999999999999877676677788899999999999999999999999999999999999


Q ss_pred             cccCccC--CCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCC
Q 048790          404 FLNSSID--LKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPS  481 (482)
Q Consensus       404 ~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  481 (482)
                      |+.+...  ....+..|+|||.|+|.|||++||++|+++++++|+++|+++++++++.     ....+++..|++++.|+
T Consensus       403 wl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~v~  477 (489)
T PLN02936        403 FDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDI-----VMTTGATIHTTNGLYMT  477 (489)
T ss_pred             cCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCcc-----ceecceEEeeCCCeEEE
Confidence            9964321  1123457999999999999999999999999999999999999876431     22345677788888775


Q ss_pred             C
Q 048790          482 L  482 (482)
Q Consensus       482 ~  482 (482)
                      +
T Consensus       478 ~  478 (489)
T PLN02936        478 V  478 (489)
T ss_pred             E
Confidence            3


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.5e-65  Score=497.26  Aligned_cols=420  Identities=19%  Similarity=0.271  Sum_probs=320.2

Q ss_pred             CcccccccccCCCCCcHHHHHHHhhhC-CcEEEecCCccEEEeeCHHHHHHHHHhccccccCCCccchhhhhccCCccee
Q 048790           42 LPLIGNLHQLTGDSPHVSLQKLSNEYG-PLMFLQLGSLPTLVISSADVARDIFRTHDLIFSGRPELYAAKIFSYNCSNIA  120 (482)
Q Consensus        42 ~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (482)
                      .++.|+...... +...++..+.++++ .+++++.++.  ++++||+.+++|+..+...|......... .....+.++ 
T Consensus        49 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~-~~~~~g~gi-  123 (502)
T PLN02426         49 AYLTASWAKDFD-NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAI-LGDLLGRGI-  123 (502)
T ss_pred             CCccHHHHHhcc-cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHH-HHHhcCCce-
Confidence            457888766423 45667777888888 5788776554  89999999999998765556543322111 111124454 


Q ss_pred             eCCCChhHHHHHHHHHHhhcChhhhhhhH--HHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHHHHHHHHHhhcccc
Q 048790          121 FAPYGEYWREIRKIAILELLGSKRVQSFQ--AVRNEEVADMIKIIARSS----AGPTDLSRLIFLLANNIICRVTFGRKY  194 (482)
Q Consensus       121 ~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~--~~~~~~~~~l~~~l~~~~----~~~~d~~~~~~~~~~~~i~~~~fG~~~  194 (482)
                      ++.+|+.|+++||. +.+.|+...++.+.  +.+++..+++++.+.+..    +.++|+.++++.+++|+++.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            45569999999998 78999999888864  667777778888776532    356899999999999999999999987


Q ss_pred             ccccc-----ccCcccee-----------ecccccccc-ch-hcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcCc
Q 048790          195 DSEAD-----TGTTGFDI-----------FFPWMGWLD-KF-NGREARVMKIFRELDRFYDEEILQQHLDPRRPKPEHED  256 (482)
Q Consensus       195 ~~~~~-----~~~~~~~~-----------~~p~~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  256 (482)
                      +..+.     .....+..           .+|++..+. .+ .+..++..+..+.+.+++. ++++++++...  ....|
T Consensus       203 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~I~~r~~~~~--~~~~d  279 (502)
T PLN02426        203 GCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAA-EVIRQRRKLGF--SASKD  279 (502)
T ss_pred             cccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHH-HHHHHHHhccc--CCcch
Confidence            64321     00000000           112221111 11 1223455667778888888 88877765421  23568


Q ss_pred             HHHHHHHhhcccccccCCCHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCC-ccccccccc
Q 048790          257 LVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGR-EVVEESDIS  335 (482)
Q Consensus       257 ~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~-~~~~~~~l~  335 (482)
                      +++.+++..        .+++++.++++++++||+|||+++++|++|+|++||++|+|+++|++++.+.+ ..+++++++
T Consensus       280 ll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~  351 (502)
T PLN02426        280 LLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMK  351 (502)
T ss_pred             HHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHh
Confidence            999998642        25789999999999999999999999999999999999999999999988653 368999999


Q ss_pred             cchhHHHHHHHhhccCCCCCCCCcccccccccc-cceeeCCCCEEEEehhhhccCCCCC-CCCCCCCCCccccCccCCCC
Q 048790          336 ELMYLKLVVKEALRLHPPAPLLVPRETTEDCRV-GEYEIPSGTRVLINAKAIATDPEHW-EHPFEFRPERFLNSSIDLKG  413 (482)
Q Consensus       336 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~f~P~R~l~~~~~~~~  413 (482)
                      +||||+|||+||||++|+++.. .|.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+||||++++.....
T Consensus       352 ~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~  430 (502)
T PLN02426        352 EMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPE  430 (502)
T ss_pred             cChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCC
Confidence            9999999999999999999975 4999998887 9999999999999999999999999 99999999999974321122


Q ss_pred             CCceeecccCCCCCCCCccchHHHHHHHHHHHHhhcccccCCCCCCCCCCcccCCCcccccCCCCCCCC
Q 048790          414 NNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRFDWKLPPGMRIEDLDMEEAPGMTMHKKNSSLPSL  482 (482)
Q Consensus       414 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  482 (482)
                      ++..++|||+|+|.|+|++||++|++++++.|+++|++++.++....   .....+++++|++++.|++
T Consensus       431 ~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~---~~~~~~~~~~~~~gl~v~~  496 (502)
T PLN02426        431 NPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRA---PRFAPGLTATVRGGLPVRV  496 (502)
T ss_pred             CCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCC---CcccceeEEecCCCEEEEE
Confidence            34578999999999999999999999999999999999986543211   2234468899999987753


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.3e-60  Score=455.37  Aligned_cols=402  Identities=18%  Similarity=0.289  Sum_probs=293.8

Q ss_pred             cCCCCCCCCccCcccccccccC----CCCCcHHHHHHHhhhCC-cEEEecCCccE-------EEeeCHHHHHHHHHh---
Q 048790           31 QATRLPPGPWKLPLIGNLHQLT----GDSPHVSLQKLSNEYGP-LMFLQLGSLPT-------LVISSADVARDIFRT---   95 (482)
Q Consensus        31 ~~~~~ppgP~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------vvv~~p~~~~~i~~~---   95 (482)
                      .+.+.|||+.++|++|+..++.    ..++..++.+.++|||+ ||+++++|.|+       |+++||+.++.+|..   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            4456789999999999997643    34557899999999998 99999998666       999999999999974   


Q ss_pred             -ccccccCCCccchhhhhccCCcc---eeeCCCChhHHHHHHHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHh--cCC
Q 048790           96 -HDLIFSGRPELYAAKIFSYNCSN---IAFAPYGEYWREIRKIAILELLGSKRVQSFQAVRNEEVADMIKIIARS--SAG  169 (482)
Q Consensus        96 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Rk~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~--~~~  169 (482)
                       ++..+...... ....+   |.+   .++..+|+.|+++|++ +.++|+ ..++.|.+.|.+.++++++.|...  .++
T Consensus        94 ~~~~~~~~~~~~-~~~l~---G~~~~~s~~~~~g~~H~r~Rrl-l~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~  167 (480)
T PLN02648         94 DKRDVFTGTYMP-STAFT---GGYRVLSYLDPSEPKHAKLKSF-LFELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKG  167 (480)
T ss_pred             cccccceeeecc-Ccccc---CCceeeeecCCCCchHHHHHHH-HHHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCC
Confidence             33333322111 11222   333   5556679999999998 788898 477889999999999999999653  345


Q ss_pred             CccHHHHHHHHHHHHHHHHhhcccccccccccCccceeec-cccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 048790          170 PTDLSRLIFLLANNIICRVTFGRKYDSEADTGTTGFDIFF-PWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLD-P  247 (482)
Q Consensus       170 ~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~-p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  247 (482)
                      .+|+.++++.++++++++++||.+.+..  .....+..+. .+... ..+ +.      +...+...+. +++.++.. .
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~~--~l~~~~~~~~~~~~~~-~~~-p~------~~~~l~~~~~-~~i~~~~~~~  236 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSET--ALGSDGPALIQKWLAL-QLA-PL------ASTGLPHVLE-ELLLHTFPLP  236 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcchh--hhccchhHHHHHHHHH-Hhh-HH------HHcCchHHHH-HHhhcccCCc
Confidence            7999999999999999999999876552  1111111000 00000 000 00      0000111111 11111100 0


Q ss_pred             -CCCCCCcCcHH-------HHHHHhhcccccccCCCHHHHHHHHHH-HHhhcCcchHhHHHHHHHHHhhChH-HHHHHHH
Q 048790          248 -RRPKPEHEDLV-------DVLVRIQKDSSQAVALSNEQIKSLLTD-IFVAGTDTSSATLGWTMTEFIRNPS-VMRRAQN  317 (482)
Q Consensus       248 -~~~~~~~~d~l-------~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~Ag~~tta~~l~~~l~~L~~~P~-~q~~l~~  317 (482)
                       ........+++       +.++....+    .+++++|+.++++. +.+++++||+++++|++++|++||+ +|+++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~  312 (480)
T PLN02648        237 FFLVKSDYDKLYDFFRASATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAE  312 (480)
T ss_pred             hhhhhccHHHHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence             00001112222       244443222    25999999999875 4467788888999999999999995 9999999


Q ss_pred             HHHhhhcC-CccccccccccchhHHHHHHHhhccCCCCCCCCccccccccccc----ceeeCCCCEEEEehhhhccCCCC
Q 048790          318 EVRGVVKG-REVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVG----EYEIPSGTRVLINAKAIATDPEH  392 (482)
Q Consensus       318 Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~----g~~ip~G~~v~~~~~~~~~d~~~  392 (482)
                      |++.+.+. ++.++++++++|||+++||+||||++|+++... |++.+|++++    ||.||||+.|+++.+.+||||++
T Consensus       313 Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~  391 (480)
T PLN02648        313 EVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKV  391 (480)
T ss_pred             HHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEEChHHHhCCccc
Confidence            99999863 456899999999999999999999999999854 8899999995    79999999999999999999999


Q ss_pred             CCCCCCCCCCccccCccCCCCCCceeec---------ccCCCCCCCCccchHHHHHHHHHHHHhhcc-cccCCCC
Q 048790          393 WEHPFEFRPERFLNSSIDLKGNNFELIP---------FGVGRRGCPGMNFAMPLIELALANLLHRFD-WKLPPGM  457 (482)
Q Consensus       393 ~~~p~~f~P~R~l~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~-~~~~~~~  457 (482)
                      |+||++|+|+||++++.+.   ...+++         ||+|+|.|+|++||++|+++++++|+++|+ +++.++.
T Consensus       392 ~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        392 FDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             CCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence            9999999999998643211   122344         467789999999999999999999999998 9987765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.6e-55  Score=415.88  Aligned_cols=356  Identities=26%  Similarity=0.414  Sum_probs=291.7

Q ss_pred             cHHHHHHHhhhCCcEEEecCCcc--EEEeeCHHHHHHHHHhccccccCCCccch-hh-hhccCCcceeeCCCChhHHHHH
Q 048790           57 HVSLQKLSNEYGPLMFLQLGSLP--TLVISSADVARDIFRTHDLIFSGRPELYA-AK-IFSYNCSNIAFAPYGEYWREIR  132 (482)
Q Consensus        57 ~~~~~~~~~kyG~v~~~~~~~~~--~vvv~~p~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~R  132 (482)
                      ......+.+.||.+.++...+..  .+++++++++++++.++. .++....... .. .....+.+.++..+|+.|+++|
T Consensus        25 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~R  103 (411)
T COG2124          25 RFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLR  103 (411)
T ss_pred             hhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHH
Confidence            44566778889998888776654  799999999999998764 2222221111 10 1122234435666799999999


Q ss_pred             HHHHHhhcChhhhhhhHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHhhcccccccccccCcccee-e--c
Q 048790          133 KIAILELLGSKRVQSFQAVRNEEVADMIKIIARSSAGPTDLSRLIFLLANNIICRVTFGRKYDSEADTGTTGFDI-F--F  209 (482)
Q Consensus       133 k~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~-~--~  209 (482)
                      |+ +.+.|+++.++.+.+.+.+.++++++.+ ... +..++.+....+++++++ .+||.+.++........... .  .
T Consensus       104 kl-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~~~  179 (411)
T COG2124         104 KL-LAPAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLRLD  179 (411)
T ss_pred             HH-hccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhccC
Confidence            98 8999999999999999999999999999 433 678899999999999999 99999887653211000000 0  0


Q ss_pred             cccccccchhcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcCcHHHHHHHhhcccccccCCCHHHHHHHHHHHHhh
Q 048790          210 PWMGWLDKFNGREARVMKIFRELDRFYDEEILQQHLDPRRPKPEHEDLVDVLVRIQKDSSQAVALSNEQIKSLLTDIFVA  289 (482)
Q Consensus       210 p~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~A  289 (482)
                      |...    ......+..++...+.+|+. +++++++.     ...+|+++.|+.+..+++  ..+|++|+.++++++++|
T Consensus       180 ~~~~----~~~~~~~~~~a~~~~~~~~~-~li~~rR~-----~~~~dlls~l~~a~~~~~--~~lsd~Ei~~~~~~ll~A  247 (411)
T COG2124         180 PDLG----PEEPWRRARAARRELDAYLR-ALIAERRA-----APRDDLLSLLLSAEDDGG--GRLSDDEIRDELITLLVA  247 (411)
T ss_pred             cccC----CcccHHHHHHHHHHHHHHHH-HHHHHhcc-----CCcccHHHHHHHHhhCCC--CcCCHHHHHHHHHHHHHh
Confidence            1110    12235566778889999999 88888873     467899999998876653  159999999999999999


Q ss_pred             cCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhhcCCccccccccccchhHHHHHHHhhccCCCCCCCCccccccccccc
Q 048790          290 GTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVVKGREVVEESDISELMYLKLVVKEALRLHPPAPLLVPRETTEDCRVG  369 (482)
Q Consensus       290 g~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~  369 (482)
                      |+|||+++++|+++.|++||+.++++++|.+.                ||++++++|+||++|+++. ++|.+.+|++++
T Consensus       248 GheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d~~ig  310 (411)
T COG2124         248 GHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATEDVELG  310 (411)
T ss_pred             hhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCCEeeC
Confidence            99999999999999999999999999999775                7999999999999999998 789999999999


Q ss_pred             ceeeCCCCEEEEehhhhccCCCCCCCCCCCCCCccccCccCCCCCCceeecccCCCCCCCCccchHHHHHHHHHHHHhhc
Q 048790          370 EYEIPSGTRVLINAKAIATDPEHWEHPFEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNFAMPLIELALANLLHRF  449 (482)
Q Consensus       370 g~~ip~G~~v~~~~~~~~~d~~~~~~p~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f  449 (482)
                      |+.||||+.|.++++++||||++|+||++|||+||.          ..++|||+|+|.|+|++||++|++++++.++++|
T Consensus       311 g~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~  380 (411)
T COG2124         311 GYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRF  380 (411)
T ss_pred             CEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999997          3589999999999999999999999999999999


Q ss_pred             ccccCCC
Q 048790          450 DWKLPPG  456 (482)
Q Consensus       450 ~~~~~~~  456 (482)
                      ++...++
T Consensus       381 ~~~~~~~  387 (411)
T COG2124         381 PLLLLAE  387 (411)
T ss_pred             chhhcCC
Confidence            9887665


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=66.99  E-value=1.2  Score=37.34  Aligned_cols=43  Identities=21%  Similarity=0.209  Sum_probs=32.6

Q ss_pred             chhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEE
Q 048790          337 LMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLI  381 (482)
Q Consensus       337 lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  381 (482)
                      -..+.|||.|+.-.....-.-  =+-.+|+.++|..|||||.|..
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            346788999998877665421  2456889999999999998765


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=62.86  E-value=26  Score=21.62  Aligned_cols=43  Identities=16%  Similarity=0.258  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHH
Q 048790          277 EQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEV  319 (482)
Q Consensus       277 ~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei  319 (482)
                      -++...+..++-.|.|..+-.++--|.+..-||+...++-.|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566677777777888888888888888888999999888776


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.99  E-value=16  Score=23.39  Aligned_cols=19  Identities=16%  Similarity=0.394  Sum_probs=16.2

Q ss_pred             HHHHHHhhChHHHHHHHHH
Q 048790          300 WTMTEFIRNPSVMRRAQNE  318 (482)
Q Consensus       300 ~~l~~L~~~P~~q~~l~~E  318 (482)
                      -++.||.+||++.+++.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            3578999999999999774


No 36 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=50.41  E-value=27  Score=26.69  Aligned_cols=8  Identities=13%  Similarity=0.235  Sum_probs=3.0

Q ss_pred             HHHHHHhh
Q 048790           19 LILLIKQK   26 (482)
Q Consensus        19 ~~~~~~~~   26 (482)
                      ++++++|+
T Consensus        84 i~y~irR~   91 (122)
T PF01102_consen   84 ISYCIRRL   91 (122)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            33334333


No 37 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=47.03  E-value=66  Score=23.64  Aligned_cols=61  Identities=21%  Similarity=0.275  Sum_probs=40.5

Q ss_pred             CCCCCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecC------CccEEEeeCHHHHHHHHHh
Q 048790           32 ATRLPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLG------SLPTLVISSADVARDIFRT   95 (482)
Q Consensus        32 ~~~~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~------~~~~vvv~~p~~~~~i~~~   95 (482)
                      ..+.||--..+-++.|+..-   -..+..-++.-+||+|..+++|      |.-+||-.|-.+++.....
T Consensus        10 ~~rlppevnriLyirNLp~~---ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPFK---ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCChhhheeEEEecCCcc---ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            34455554556666665432   2234567888899999999987      4457777777777777653


No 38 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=45.88  E-value=1.1e+02  Score=21.76  Aligned_cols=49  Identities=16%  Similarity=0.162  Sum_probs=42.1

Q ss_pred             CHHHHHHHHHHHHhhcCcchHhHHHHHHHHHhhChHHHHHHHHHHHhhh
Q 048790          275 SNEQIKSLLTDIFVAGTDTSSATLGWTMTEFIRNPSVMRRAQNEVRGVV  323 (482)
Q Consensus       275 ~~~~i~~~~~~~~~Ag~~tta~~l~~~l~~L~~~P~~q~~l~~Ei~~~~  323 (482)
                      ............++.=+..++....-.+.+.++||+..+++.+.+.+-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4556666777888999999999999999999999999999999988654


No 39 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=43.64  E-value=56  Score=20.48  Aligned_cols=27  Identities=7%  Similarity=-0.087  Sum_probs=15.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccc
Q 048790            3 SQFFFLLLLITTSSFVLILLIKQKTSK   29 (482)
Q Consensus         3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~   29 (482)
                      +.++.++.+.++++++.+..+.|..++
T Consensus         2 ~il~~LIpiSl~l~~~~l~~f~Wavk~   28 (51)
T TIGR00847         2 EILTILIPISLLLGGVGLVAFLWSLKS   28 (51)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            456667777666666555555554443


No 40 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=42.04  E-value=78  Score=22.06  Aligned_cols=50  Identities=16%  Similarity=0.346  Sum_probs=32.1

Q ss_pred             HhHHHHHHHHHhh--ChHHHHHHHHHHHhhhcCCccccccccccchhHHHHHHH
Q 048790          295 SATLGWTMTEFIR--NPSVMRRAQNEVRGVVKGREVVEESDISELMYLKLVVKE  346 (482)
Q Consensus       295 a~~l~~~l~~L~~--~P~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E  346 (482)
                      +-.++|++..|-+  .+--|+.|++.+.+...+-..++.+.+.+  -|...++|
T Consensus        13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~l~~--~L~~Li~e   64 (80)
T PF10264_consen   13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEVLYN--TLGTLIKE   64 (80)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHHHHH--HHHHHHHc
Confidence            3466777777755  37788999999998876544555555433  24444444


No 41 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=41.53  E-value=1.2e+02  Score=29.29  Aligned_cols=37  Identities=19%  Similarity=0.235  Sum_probs=21.2

Q ss_pred             hhhCCcEEEecCCccEEEeeCHHHHHHHHHhcccccc
Q 048790           65 NEYGPLMFLQLGSLPTLVISSADVARDIFRTHDLIFS  101 (482)
Q Consensus        65 ~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~~~~~~  101 (482)
                      -+||.|++-.+-++.+.|=.=|..-++=|......|+
T Consensus       221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            3789888877777665554444444444444433343


No 42 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=41.28  E-value=60  Score=22.96  Aligned_cols=18  Identities=17%  Similarity=0.375  Sum_probs=15.7

Q ss_pred             hHHHHHHHHHHHhhhcCC
Q 048790          309 PSVMRRAQNEVRGVVKGR  326 (482)
Q Consensus       309 P~~q~~l~~Ei~~~~~~~  326 (482)
                      |+..+.+|+||.+++...
T Consensus        36 pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          36 PDYLEQLRKEILEVISKY   53 (88)
T ss_pred             cchHHHHHHHHHHHHHHH
Confidence            999999999999987644


No 43 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=41.21  E-value=8  Score=28.11  Aligned_cols=19  Identities=32%  Similarity=0.553  Sum_probs=15.1

Q ss_pred             CCCceeecccCCCCCCCCc
Q 048790          413 GNNFELIPFGVGRRGCPGM  431 (482)
Q Consensus       413 ~~~~~~~~Fg~G~r~C~G~  431 (482)
                      +.....+|||.|.-.|+|.
T Consensus       102 g~gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  102 GCGSSNNPFGAGAAACFAA  120 (131)
T ss_pred             ccCcccCCcCccHHHHHHH
Confidence            3445679999999999875


No 44 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=40.96  E-value=4.6  Score=37.92  Aligned_cols=43  Identities=19%  Similarity=0.200  Sum_probs=32.8

Q ss_pred             chhHHHHHHHhhccCCCCCCCCcccccccccccceeeCCCCEEEE
Q 048790          337 LMYLKLVVKEALRLHPPAPLLVPRETTEDCRVGEYEIPSGTRVLI  381 (482)
Q Consensus       337 lp~l~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~G~~v~~  381 (482)
                      -..+.|||.|+.-+.-....-  =+-.+|+.++|..|||||.|..
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEE
Confidence            346788999998887665421  2456899999999999998765


No 45 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=39.44  E-value=30  Score=26.77  Aligned_cols=23  Identities=22%  Similarity=0.453  Sum_probs=17.0

Q ss_pred             CCCCCccchHHHHHHHHHHHHhh
Q 048790          426 RGCPGMNFAMPLIELALANLLHR  448 (482)
Q Consensus       426 r~C~G~~~A~~~~~~~l~~ll~~  448 (482)
                      -.|.|++||+.++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            46999999999999999999975


No 46 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=38.67  E-value=90  Score=20.71  Aligned_cols=20  Identities=20%  Similarity=0.610  Sum_probs=12.9

Q ss_pred             ChhhHHHHHHHHHHHHHHHH
Q 048790            1 MISQFFFLLLLITTSSFVLI   20 (482)
Q Consensus         1 ~~~~l~~~~~~~~~~~~~~~   20 (482)
                      |++.+++++..+++.+++++
T Consensus         1 MI~d~iLi~ICVaii~lIlY   20 (68)
T PF05961_consen    1 MIGDFILIIICVAIIGLILY   20 (68)
T ss_pred             ChHHHHHHHHHHHHHHHHHH
Confidence            67777777777666655433


No 47 
>PRK02302 hypothetical protein; Provisional
Probab=37.34  E-value=75  Score=22.65  Aligned_cols=35  Identities=9%  Similarity=0.175  Sum_probs=27.9

Q ss_pred             HHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHh
Q 048790           61 QKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRT   95 (482)
Q Consensus        61 ~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~   95 (482)
                      .+--+|||+|+.+.=-..-+++-+|.+.+.++..+
T Consensus        20 ~r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         20 ARKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            34457999999987666677888899999999865


No 48 
>PRK06789 flagellar motor switch protein; Validated
Probab=37.21  E-value=29  Score=23.71  Aligned_cols=40  Identities=15%  Similarity=0.184  Sum_probs=31.8

Q ss_pred             HHHHhhccCCCCCCCCcccccccc--cccceeeCCCCEEEEe
Q 048790          343 VVKEALRLHPPAPLLVPRETTEDC--RVGEYEIPSGTRVLIN  382 (482)
Q Consensus       343 ~i~EtlRl~p~~~~~~~R~~~~d~--~~~g~~ip~G~~v~~~  382 (482)
                      -++|-+.|.+..-.-+-|.+.+++  .++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            478899999998776767776654  4599999999988775


No 49 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.01  E-value=1.2e+02  Score=21.54  Aligned_cols=36  Identities=8%  Similarity=0.146  Sum_probs=29.3

Q ss_pred             HHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHh
Q 048790           60 LQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRT   95 (482)
Q Consensus        60 ~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~   95 (482)
                      ..+--+|||+|+...=-..-+++-++.+.+.++..+
T Consensus        18 ~aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          18 DARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             hhHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            455568999999987666677888999999999875


No 50 
>PHA03049 IMV membrane protein; Provisional
Probab=35.26  E-value=1.1e+02  Score=20.28  Aligned_cols=18  Identities=11%  Similarity=0.477  Sum_probs=11.4

Q ss_pred             ChhhHHHHHHHHHHHHHH
Q 048790            1 MISQFFFLLLLITTSSFV   18 (482)
Q Consensus         1 ~~~~l~~~~~~~~~~~~~   18 (482)
                      |++.+++++..+++.+++
T Consensus         1 MI~d~~l~iICVaIi~lI   18 (68)
T PHA03049          1 MIGDIILVIICVVIIGLI   18 (68)
T ss_pred             ChHHHHHHHHHHHHHHHH
Confidence            677777766666655443


No 51 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=34.48  E-value=18  Score=22.69  Aligned_cols=11  Identities=45%  Similarity=0.945  Sum_probs=9.2

Q ss_pred             ecccCCCCCCC
Q 048790          419 IPFGVGRRGCP  429 (482)
Q Consensus       419 ~~Fg~G~r~C~  429 (482)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999984


No 52 
>PRK02886 hypothetical protein; Provisional
Probab=34.31  E-value=91  Score=22.12  Aligned_cols=35  Identities=11%  Similarity=0.236  Sum_probs=27.8

Q ss_pred             HHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHh
Q 048790           61 QKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRT   95 (482)
Q Consensus        61 ~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~   95 (482)
                      .+--++||+|+.+.=-..-+++-+|.+.+.++..+
T Consensus        18 ~r~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         18 AKQLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HHHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            44457999999987666677888899999999865


No 53 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=32.42  E-value=1.2e+02  Score=18.84  Aligned_cols=35  Identities=14%  Similarity=0.233  Sum_probs=24.2

Q ss_pred             HHHHhhhCCcEEEecCC----ccEEEeeCHHHHHHHHHh
Q 048790           61 QKLSNEYGPLMFLQLGS----LPTLVISSADVARDIFRT   95 (482)
Q Consensus        61 ~~~~~kyG~v~~~~~~~----~~~vvv~~p~~~~~i~~~   95 (482)
                      .++.++||+|..+.+..    .-.|-..++++++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            46778999998877543    234555688888888763


No 54 
>PF03597 CcoS:  Cytochrome oxidase maturation protein cbb3-type;  InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase. 
Probab=32.21  E-value=96  Score=18.86  Aligned_cols=24  Identities=4%  Similarity=0.102  Sum_probs=11.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc
Q 048790            4 QFFFLLLLITTSSFVLILLIKQKT   27 (482)
Q Consensus         4 ~l~~~~~~~~~~~~~~~~~~~~~~   27 (482)
                      .++.++.+.++++++....+.|..
T Consensus         2 ~l~~lip~sl~l~~~~l~~f~Wav   25 (45)
T PF03597_consen    2 ILYILIPVSLILGLIALAAFLWAV   25 (45)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHH
Confidence            345555555555554444444433


No 55 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=32.11  E-value=46  Score=26.37  Aligned_cols=41  Identities=20%  Similarity=0.564  Sum_probs=28.3

Q ss_pred             ccccccccceeeCCCCEEEEehh-------hhccCCCCCCCCCCCCCCc
Q 048790          362 TTEDCRVGEYEIPSGTRVLINAK-------AIATDPEHWEHPFEFRPER  403 (482)
Q Consensus       362 ~~~d~~~~g~~ip~G~~v~~~~~-------~~~~d~~~~~~p~~f~P~R  403 (482)
                      ..+|+.++|..||+|+.-+....       .++++...|.. ..|+|+.
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~~   99 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPSK   99 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCchh
Confidence            45889999999999998666432       34666666755 5555554


No 56 
>PRK09458 pspB phage shock protein B; Provisional
Probab=32.03  E-value=91  Score=21.37  Aligned_cols=26  Identities=15%  Similarity=0.164  Sum_probs=13.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccc
Q 048790            4 QFFFLLLLITTSSFVLILLIKQKTSK   29 (482)
Q Consensus         4 ~l~~~~~~~~~~~~~~~~~~~~~~~~   29 (482)
                      .+++++.+++.++++...++..++++
T Consensus         3 ~~fl~~PliiF~ifVaPiWL~LHY~s   28 (75)
T PRK09458          3 ALFLAIPLTIFVLFVAPIWLWLHYRS   28 (75)
T ss_pred             chHHHHhHHHHHHHHHHHHHHHhhcc
Confidence            44445555555555555555544444


No 57 
>PF10883 DUF2681:  Protein of unknown function (DUF2681);  InterPro: IPR020274 This entry contains membrane proteins with no known function.
Probab=31.55  E-value=98  Score=22.03  Aligned_cols=23  Identities=13%  Similarity=-0.065  Sum_probs=10.4

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHH
Q 048790            1 MISQFFFLLLLITTSSFVLILLI   23 (482)
Q Consensus         1 ~~~~l~~~~~~~~~~~~~~~~~~   23 (482)
                      |++..+.+.++.++++++.++++
T Consensus         1 Mi~l~iv~~~~~v~~~i~~y~~~   23 (87)
T PF10883_consen    1 MINLQIVGGVGAVVALILAYLWW   23 (87)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHH
Confidence            55555544444444434333333


No 58 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=30.30  E-value=1.7e+02  Score=21.87  Aligned_cols=12  Identities=33%  Similarity=0.376  Sum_probs=8.5

Q ss_pred             cCcccccccccC
Q 048790           41 KLPLIGNLHQLT   52 (482)
Q Consensus        41 ~~p~~G~~~~~~   52 (482)
                      .-|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            468888876653


No 59 
>PHA02650 hypothetical protein; Provisional
Probab=30.11  E-value=1.5e+02  Score=20.49  Aligned_cols=21  Identities=10%  Similarity=0.214  Sum_probs=9.3

Q ss_pred             HHHHHHHHHHHHHHHHhhccc
Q 048790            9 LLLITTSSFVLILLIKQKTSK   29 (482)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~   29 (482)
                      +.+++++++++..+++..++.
T Consensus        56 i~~v~i~~l~~flYLK~~~r~   76 (81)
T PHA02650         56 IFSLIIVALFSFFVFKGYTRN   76 (81)
T ss_pred             HHHHHHHHHHHHHHHHHhccc
Confidence            333444444455555544433


No 60 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=29.77  E-value=50  Score=20.90  Aligned_cols=18  Identities=22%  Similarity=0.266  Sum_probs=15.4

Q ss_pred             hCCcEEEecCCccEEEee
Q 048790           67 YGPLMFLQLGSLPTLVIS   84 (482)
Q Consensus        67 yG~v~~~~~~~~~~vvv~   84 (482)
                      =|++|+++.||++++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999999888874


No 61 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=29.14  E-value=1.3e+02  Score=21.42  Aligned_cols=19  Identities=21%  Similarity=0.468  Sum_probs=15.8

Q ss_pred             ChHHHHHHHHHHHhhhcCC
Q 048790          308 NPSVMRRAQNEVRGVVKGR  326 (482)
Q Consensus       308 ~P~~q~~l~~Ei~~~~~~~  326 (482)
                      .|+..+.+++||-+++...
T Consensus        35 ~p~~l~~lk~eil~VIsKY   53 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKRY   53 (87)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            4999999999999887544


No 62 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=28.56  E-value=1.5e+02  Score=20.66  Aligned_cols=20  Identities=20%  Similarity=0.467  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 048790            5 FFFLLLLITTSSFVLILLIK   24 (482)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~   24 (482)
                      ++..|++++++++++++++.
T Consensus        26 ~lMtILivLVIIiLlImlfq   45 (85)
T PF10717_consen   26 TLMTILIVLVIIILLIMLFQ   45 (85)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            34445554444444444443


No 63 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=28.39  E-value=23  Score=28.70  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=26.0

Q ss_pred             CCCCCCccccCccCCCCCCceeecccCCCCCCCCccc
Q 048790          397 FEFRPERFLNSSIDLKGNNFELIPFGVGRRGCPGMNF  433 (482)
Q Consensus       397 ~~f~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  433 (482)
                      -+|+|++|-+=-...+....+.+-|..|.-.|-|.+=
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaKs   71 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAKS   71 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccCc
Confidence            3899999964211122244578999999999999763


No 64 
>PF09902 DUF2129:  Uncharacterized protein conserved in bacteria (DUF2129);  InterPro: IPR016979 This is a group of uncharacterised conserved proteins.
Probab=28.13  E-value=1.4e+02  Score=20.33  Aligned_cols=34  Identities=6%  Similarity=0.214  Sum_probs=26.5

Q ss_pred             HHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHh
Q 048790           62 KLSNEYGPLMFLQLGSLPTLVISSADVARDIFRT   95 (482)
Q Consensus        62 ~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~   95 (482)
                      +--++||+|+.+.=-..-+++-.|-+.+.++..+
T Consensus        15 r~L~kfG~i~Y~Skk~kYvvlYvn~~~~e~~~~k   48 (71)
T PF09902_consen   15 RQLRKFGDIHYVSKKMKYVVLYVNEEDVEEIIEK   48 (71)
T ss_pred             HhHhhcccEEEEECCccEEEEEECHHHHHHHHHH
Confidence            3447899999887655667778899999998765


No 65 
>PRK13989 cell division topological specificity factor MinE; Provisional
Probab=27.36  E-value=1.4e+02  Score=21.05  Aligned_cols=23  Identities=17%  Similarity=0.248  Sum_probs=17.4

Q ss_pred             ChHHHHHHHHHHHhhhcCCcccc
Q 048790          308 NPSVMRRAQNEVRGVVKGREVVE  330 (482)
Q Consensus       308 ~P~~q~~l~~Ei~~~~~~~~~~~  330 (482)
                      .|+..+++++||-+++...-.++
T Consensus        36 ~p~~l~~lk~dil~VIsKYv~Id   58 (84)
T PRK13989         36 PPDYLPALQKELVAVISKYVKIS   58 (84)
T ss_pred             CHHHHHHHHHHHHHHHHHheeeC
Confidence            48899999999999876543333


No 66 
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=27.16  E-value=1.1e+02  Score=21.00  Aligned_cols=24  Identities=29%  Similarity=0.351  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcc
Q 048790            5 FFFLLLLITTSSFVLILLIKQKTS   28 (482)
Q Consensus         5 l~~~~~~~~~~~~~~~~~~~~~~~   28 (482)
                      .++++.+++.++++...++..++.
T Consensus         4 ~fl~~Pliif~ifVap~wl~lHY~   27 (75)
T TIGR02976         4 FFLAIPLIIFVIFVAPLWLILHYR   27 (75)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444444444444444444443


No 67 
>PHA03162 hypothetical protein; Provisional
Probab=24.99  E-value=81  Score=24.17  Aligned_cols=24  Identities=25%  Similarity=0.437  Sum_probs=20.0

Q ss_pred             cCCCCCCCCccchHHHHHHHHHHH
Q 048790          422 GVGRRGCPGMNFAMPLIELALANL  445 (482)
Q Consensus       422 g~G~r~C~G~~~A~~~~~~~l~~l  445 (482)
                      +.|.+.|||+...+-|+-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999998887777665


No 68 
>PRK13988 cell division topological specificity factor MinE; Provisional
Probab=23.88  E-value=2.2e+02  Score=20.82  Aligned_cols=19  Identities=21%  Similarity=0.424  Sum_probs=15.9

Q ss_pred             ChHHHHHHHHHHHhhhcCC
Q 048790          308 NPSVMRRAQNEVRGVVKGR  326 (482)
Q Consensus       308 ~P~~q~~l~~Ei~~~~~~~  326 (482)
                      .|+..+.+++||.+++...
T Consensus        37 sp~~l~~mk~dIl~VIskY   55 (97)
T PRK13988         37 SPELLEQMRKEILEVVARY   55 (97)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            4899999999999987654


No 69 
>PRK13987 cell division topological specificity factor MinE; Provisional
Probab=23.70  E-value=1.9e+02  Score=20.87  Aligned_cols=19  Identities=16%  Similarity=0.382  Sum_probs=15.6

Q ss_pred             ChHHHHHHHHHHHhhhcCC
Q 048790          308 NPSVMRRAQNEVRGVVKGR  326 (482)
Q Consensus       308 ~P~~q~~l~~Ei~~~~~~~  326 (482)
                      .|+..+.+++||.+++...
T Consensus        33 sp~~l~~lk~eIl~VI~kY   51 (91)
T PRK13987         33 SPDVLEMIKEDILKVISKY   51 (91)
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            3899999999999887643


No 70 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=22.81  E-value=1.6e+02  Score=22.67  Aligned_cols=39  Identities=10%  Similarity=0.244  Sum_probs=29.6

Q ss_pred             CcHHHHHHHhhhCCcEEEecCCccEEEeeCHHHHHHHHHhc
Q 048790           56 PHVSLQKLSNEYGPLMFLQLGSLPTLVISSADVARDIFRTH   96 (482)
Q Consensus        56 ~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~i~~~~   96 (482)
                      ....+++|.++||.+--..  +...+...|++.++++...+
T Consensus        76 v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   76 VEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            3457899999999765532  45677788999999998653


No 71 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=22.77  E-value=1.4e+02  Score=17.38  Aligned_cols=16  Identities=13%  Similarity=0.484  Sum_probs=10.9

Q ss_pred             HHHHh-hChHHHHHHHH
Q 048790          302 MTEFI-RNPSVMRRAQN  317 (482)
Q Consensus       302 l~~L~-~~P~~q~~l~~  317 (482)
                      +..+. +||++++.+++
T Consensus        19 L~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   19 LQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHhChhHHHHHHh
Confidence            33343 79999988764


No 72 
>COG5329 Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms]
Probab=22.55  E-value=52  Score=32.47  Aligned_cols=26  Identities=19%  Similarity=0.289  Sum_probs=21.1

Q ss_pred             CCcHHHHHHHhhhCCcEEEecCCccE
Q 048790           55 SPHVSLQKLSNEYGPLMFLQLGSLPT   80 (482)
Q Consensus        55 ~~~~~~~~~~~kyG~v~~~~~~~~~~   80 (482)
                      .....|.++.++||+|+-+++.+.+-
T Consensus       294 af~kHF~~L~~~YG~v~vvNLl~tK~  319 (570)
T COG5329         294 AFDKHFDKLREKYGDVYVVNLLKTKG  319 (570)
T ss_pred             HHHHHHHHHHHHcCCEEEEEcccCCc
Confidence            34567999999999999999877553


No 73 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=22.36  E-value=2.4e+02  Score=23.64  Aligned_cols=59  Identities=14%  Similarity=0.097  Sum_probs=34.6

Q ss_pred             hhcCcchHhHHHHHHHHHhhC--------------hHHHHHHHHHHHhhhcCCccccc--cccccchhHHHHHHHhhcc
Q 048790          288 VAGTDTSSATLGWTMTEFIRN--------------PSVMRRAQNEVRGVVKGREVVEE--SDISELMYLKLVVKEALRL  350 (482)
Q Consensus       288 ~Ag~~tta~~l~~~l~~L~~~--------------P~~q~~l~~Ei~~~~~~~~~~~~--~~l~~lp~l~a~i~EtlRl  350 (482)
                      -||..||+.+.--++-.+.-+              |+.-.++++|-+    .+..+++  ...+.++.|+.++.|--|-
T Consensus        15 GAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~----~GrhisyFgpeANdf~~LE~~f~eYg~~   89 (289)
T COG3954          15 GAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARD----AGRHISYFGPEANDFGLLEQTFIEYGQS   89 (289)
T ss_pred             CCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHH----cCCcceecCccccchHHHHHHHHHhccc
Confidence            456666666665565555444              444444444433    3444554  3456788888888886554


No 74 
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=21.72  E-value=45  Score=33.75  Aligned_cols=40  Identities=13%  Similarity=0.140  Sum_probs=24.8

Q ss_pred             CCCCCccCcccccccccCCCCCcHHHHHHHhhhCCcEEEecC
Q 048790           35 LPPGPWKLPLIGNLHQLTGDSPHVSLQKLSNEYGPLMFLQLG   76 (482)
Q Consensus        35 ~ppgP~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~~~~~   76 (482)
                      ..|.+--+--+.++ .+ .+.....|.+|+++|-.++...+.
T Consensus        43 ~~pv~~el~kvk~l-~l-~Ges~~~f~~w~~~~~~i~~~~~~   82 (569)
T PRK04778         43 NLPVNDELEKVKKL-NL-TGQSEEKFEEWRQKWDEIVTNSLP   82 (569)
T ss_pred             cCCHHHHHHHHhcC-CC-CcccHHHHHHHHHHHHHHHHhhhh
Confidence            33544444344444 34 455567899999999887766443


No 75 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=21.53  E-value=1.9e+02  Score=20.22  Aligned_cols=61  Identities=16%  Similarity=0.076  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHhhhcCCcccccccccc---chhHHHHHHHhhccCCCCCC-CCcccccccccccce
Q 048790          310 SVMRRAQNEVRGVVKGREVVEESDISE---LMYLKLVVKEALRLHPPAPL-LVPRETTEDCRVGEY  371 (482)
Q Consensus       310 ~~q~~l~~Ei~~~~~~~~~~~~~~l~~---lp~l~a~i~EtlRl~p~~~~-~~~R~~~~d~~~~g~  371 (482)
                      +.|+++.+.+.++ +.++..||.++.+   .|---..+--+++-+|.... -.-|++..+-.++||
T Consensus         2 ~f~~~V~~~l~~I-P~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRTI-PYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhCC-CCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            5788899988875 4456678876644   33334455556666665321 123788888778776


No 76 
>PF06667 PspB:  Phage shock protein B;  InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=21.19  E-value=1.8e+02  Score=20.09  Aligned_cols=8  Identities=25%  Similarity=0.393  Sum_probs=2.9

Q ss_pred             HHHHHHHH
Q 048790           17 FVLILLIK   24 (482)
Q Consensus        17 ~~~~~~~~   24 (482)
                      ++...++.
T Consensus        16 fVap~WL~   23 (75)
T PF06667_consen   16 FVAPIWLI   23 (75)
T ss_pred             HHHHHHHH
Confidence            33333333


No 77 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=20.98  E-value=2.5e+02  Score=19.75  Aligned_cols=38  Identities=11%  Similarity=0.182  Sum_probs=27.7

Q ss_pred             HHHHHHHhhhCCc---EEEecCCccEEEeeCH-----HHHHHHHHh
Q 048790           58 VSLQKLSNEYGPL---MFLQLGSLPTLVISSA-----DVARDIFRT   95 (482)
Q Consensus        58 ~~~~~~~~kyG~v---~~~~~~~~~~vvv~~p-----~~~~~i~~~   95 (482)
                      +...+++++|.++   +++..++.+-+.|.+.     +.+.+++..
T Consensus        24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            4467788899987   8999888888887544     566666643


No 78 
>PF02439 Adeno_E3_CR2:  Adenovirus E3 region protein CR2;  InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []. This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.
Probab=20.83  E-value=1.9e+02  Score=16.81  Aligned_cols=15  Identities=0%  Similarity=-0.022  Sum_probs=5.9

Q ss_pred             hhHHHHHHHHHHHHH
Q 048790            3 SQFFFLLLLITTSSF   17 (482)
Q Consensus         3 ~~l~~~~~~~~~~~~   17 (482)
                      +.+...++..+++++
T Consensus         7 aIIv~V~vg~~iiii   21 (38)
T PF02439_consen    7 AIIVAVVVGMAIIII   21 (38)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            334433333333333


No 79 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=20.81  E-value=56  Score=27.70  Aligned_cols=20  Identities=30%  Similarity=0.483  Sum_probs=17.5

Q ss_pred             hhhccCCCCCCCCCCCCCCc
Q 048790          384 KAIATDPEHWEHPFEFRPER  403 (482)
Q Consensus       384 ~~~~~d~~~~~~p~~f~P~R  403 (482)
                      +.-+.|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34588999999999999988


No 80 
>KOG3054 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.60  E-value=1.6e+02  Score=25.51  Aligned_cols=26  Identities=19%  Similarity=0.252  Sum_probs=15.3

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHhh
Q 048790            1 MISQFFFLLLLITTSSFVLILLIKQK   26 (482)
Q Consensus         1 ~~~~l~~~~~~~~~~~~~~~~~~~~~   26 (482)
                      |..+++.++.+++++++++.+++++.
T Consensus         1 m~~~v~vlVaa~llV~~i~l~l~~r~   26 (299)
T KOG3054|consen    1 MEEIVAVLVAAALLVAVILLFLWKRR   26 (299)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhh
Confidence            55666666666666666555554444


No 81 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.52  E-value=1.2e+02  Score=18.02  Aligned_cols=21  Identities=19%  Similarity=0.191  Sum_probs=15.9

Q ss_pred             HHHHHHHHHhhChHHHHHHHH
Q 048790          297 TLGWTMTEFIRNPSVMRRAQN  317 (482)
Q Consensus       297 ~l~~~l~~L~~~P~~q~~l~~  317 (482)
                      .-.|-+..++++||+|.-+.=
T Consensus        11 ~gl~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   11 VGLFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             CCHHHHHHHHcCHHHHHHHHH
Confidence            335677788999999988753


No 82 
>PF15339 Afaf:  Acrosome formation-associated factor
Probab=20.07  E-value=1.5e+02  Score=23.95  Aligned_cols=25  Identities=12%  Similarity=0.075  Sum_probs=14.3

Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHh
Q 048790            1 MISQFFFLLLLITTSSFVLILLIKQ   25 (482)
Q Consensus         1 ~~~~l~~~~~~~~~~~~~~~~~~~~   25 (482)
                      ||++-++.+++.+++++++...++.
T Consensus       133 mLGIsLmTl~lfv~Ll~~c~atlyk  157 (200)
T PF15339_consen  133 MLGISLMTLFLFVILLAFCSATLYK  157 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5666666666655555555554443


Done!