Citrus Sinensis ID: 048791

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-----
Protein Sequence
MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccEEEcHHHHHHHHccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHEEcHHHHHHHHHHHHHHHHHHccccccccccccccEEHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHEEEEEEEcccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccccccccccccccccccccccccccEEEEEccccccccEEcccccccccccccccccccHHHHHHHHcccEEEEccccccccccEEEEEccHHHHHHccccccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEcHHHHHHHHccccccccccccccccEEEcEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccEEcccccccccEEEEEEccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEHcccc
Coil and Loop (DISEMBL)
MSFLRGLVLILFLAASTTTAAAQRnatvscplDFNFLQQLMSqfktpsdlpsqcqnvkkglrlVDSQYLkrtgnflpplnaseSCWRVYQTLVDrvapnfdvrsrcgfqtdwisegcmnistisqferlipqstlddvvsncnqslgnsapcaaCTTSLARLQAYltgpsvgnlsdclaypSIYAAAaanqfgptdtgtanclFSFEFAESSKKskkknkgliAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATrnfsrdniigrggygnvykgllpdgsEVALKRFKncsaagdatFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCdlmkngsvydhlfasngpklswplrQSIALGTARGLaylhfgaqpaifhrdika
Flexible Loop (DISEMBL)
MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTgnflpplnaSESCWRVYQTLVDrvapnfdvrSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLFSFEFAESSkkskkknkgliAGVLVVCVVGLLLisggvwifwrkrvvsnrrkkrereevnriemglesihestnlvrfTFDDIKKAtrnfsrdniigrggYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA
Low Complexity Region (SEG)
MSFLRGLVLILFLaastttaaaqrnatVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYaaaaaNQFGPTDTGTANCLFSFEFAEsskkskkknkgliagvlvvcvvglllisggvWIFWrkrvvsnrrkkrereevnrIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA
Disordered region (IsUnstruct)
**FLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFK********CQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLFSFEF************GLIAGVLVVCVVGLLLISGGVWIFWRKRVVS***************MGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFH*****
Disordered Region (DISOPRED)
*SFLRGLVLILFLAASTTT********VSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTAN***********************GVLVVCVVGLLLISGGVWIFWRKR*****************************LVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVAL*R************KHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA
Disordered Region (DISEMBL)
MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLFSFEFA**********KGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA
Disordered Region (DISPRO)
MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRR********************STNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	425	2.2.26 [Sep-21-2011]
P93050	617	Probable LRR receptor-lik	yes	no	0.974	0.670	0.558	1e-135
O04086	625	Probable receptor-like pr	no	no	0.931	0.633	0.343	1e-51
C0LGU5	614	Probable LRR receptor-lik	no	no	0.458	0.317	0.390	1e-34
Q8RY65	635	Protein NSP-INTERACTING K	no	no	0.621	0.415	0.359	3e-34
Q9LFS4	638	Protein NSP-INTERACTING K	no	no	0.421	0.280	0.415	9e-34
Q8GX23	670	Proline-rich receptor-lik	no	no	0.338	0.214	0.469	1e-33
O23081	665	Cysteine-rich receptor-li	no	no	0.491	0.314	0.383	2e-33
Q1PEM5	513	Proline-rich receptor-lik	no	no	0.437	0.362	0.392	3e-33
O65238	872	G-type lectin S-receptor-	no	no	0.456	0.222	0.420	3e-33
Q9XI96	699	Proline-rich receptor-lik	no	no	0.331	0.201	0.455	6e-33

>sp|P93050|RKF3_ARATH Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1

 Score =  481 bits (1238), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/426 (55%), Positives = 303/426 (71%), Gaps = 12/426 (2%)

Query: 1   MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPS-DLPSQCQNVKK 59
           M FLR + ++ F+    T+ +A +N+T  CPLDF+ L+     F+ P  D  + CQ + +
Sbjct: 1   MLFLRRIAVVFFV---FTSFSAAQNST--CPLDFSVLEP----FRRPKPDGATTCQYLLQ 51

Query: 60  GLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMN 119
           GLRL+ S +L++TG+FLPP  ++ SCW   Q+ V    P FDVRS CGFQT WIS+GCM+
Sbjct: 52  GLRLLYSHHLRQTGSFLPPPESAASCWAALQSSVAGFLPRFDVRSTCGFQTPWISQGCMD 111

Query: 120 ISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLA 179
           I+T SQFE LIP S+L      CN SL ++ PCA+CT SL+  Q YL+GPS+GN+SDC +
Sbjct: 112 ITTRSQFESLIPNSSLATTAMRCNTSLESNTPCASCTQSLSAFQPYLSGPSLGNVSDCAS 171

Query: 180 YPSIYAAAAANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISG 239
           +PSIYAAA AN  GPTD GTA CLF  + A  +     K K L++   V+ V  +L+I+ 
Sbjct: 172 FPSIYAAAFANSLGPTDKGTAKCLFQLDLASPTSSGANKVKVLVSSFSVLLVASVLVITA 231

Query: 240 GVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNII 299
             W ++ +R  S   K R+       +  L+S+ EST LV+F+FD+IKKAT NFSR NII
Sbjct: 232 --WFWYCRRKKSKLLKPRDTSLEAGTQSRLDSMSESTTLVKFSFDEIKKATNNFSRHNII 289

Query: 300 GRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIAT 359
           GRGGYGNV+KG LPDG++VA KRFKNCSA GDA F HEVEVIAS+RHVNL+ALRGYC AT
Sbjct: 290 GRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTAT 349

Query: 360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIF 419
           T  EGHQRIIVCDL+ NGS++DHLF     +L+WPLRQ IALG ARGLAYLH+GAQP+I 
Sbjct: 350 TPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSII 409

Query: 420 HRDIKA 425
           HRDIKA
Sbjct: 410 HRDIKA 415

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O04086|Y1105_ARATH Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1

 Score =  204 bits (519), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/425 (34%), Positives = 220/425 (51%), Gaps = 29/425 (6%)

Query: 19  TAAAQRNATVSCPLDFNFLQQL-------MSQFKTPSDLPSQCQNVKKGLRLVDSQYLKR 71
           T    ++ + +CPLDF+ +  +           K+     S CQ++   + +  +  LK+
Sbjct: 16  TNCVAQSPSQTCPLDFSHVLTIPWNTTDCQKSDKSADSKNSCCQSLLTLIGIPLAHRLKQ 75

Query: 72  TGNF-LPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWI--SEGCMNISTISQF-E 127
           T NF LP L  S SC    QT +  ++ + ++ S C     ++  +E C  I T   +  
Sbjct: 76  TSNFRLPNLATSISCLNNLQTKLSSLSLSSNLTSLCFDPNQFVINNETCAGIQTTQDWVS 135

Query: 128 RLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSD---CLAYPSIY 184
           RL P + LD   S C+  L +   C AC  +  R+Q  L     GN S    C  +   Y
Sbjct: 136 RLGPSTALD---SACSSGLTDLTRCDACVAAGFRVQKQLITLD-GNSSHGVYCYHFVVTY 191

Query: 185 AAAAANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIF 244
           AA   N+ GP      +CLFS          KK++   +A  +   + G L+I+G + ++
Sbjct: 192 AAGIVNKKGPESDDALSCLFSLSLRSPLNSKKKRHTVALALGITGAIFGALVIAGLICLY 251

Query: 245 WRKRVVSNRRKKREREEVNRIEMGLE-SIHESTNLVRFTFDDIKKATRNFSRDNIIGRGG 303
           +R        K  +  EV   + G       +T  + F  ++++KAT NFS+ N IGRGG
Sbjct: 252 FR------FGKAVKGGEVGWEDQGSRPKWRPNTGSIWFKIEELEKATNNFSQKNFIGRGG 305

Query: 304 YGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE 363
           +G VYKG+LPDGS +A+K+       GDA F++EVE+I++++H NLV LRG  +     E
Sbjct: 306 FGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSE 365

Query: 364 GHQRIIVCDLMKNGSVYDHLFA---SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFH 420
             QR +V D M NG++ DHLF    +    LSWP R+SI L  A+GLAYLH+G +PAI+H
Sbjct: 366 S-QRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYH 424

Query: 421 RDIKA 425
           RDIK 
Sbjct: 425 RDIKG 429

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGU5|Y5457_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1

 Score =  147 bits (372), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 124/220 (56%), Gaps = 25/220 (11%)

Query: 212 SKKSKKKNKGLIA----GVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNRIEM 267
           S+K   K+  L+     G++V  ++ L+ +    W+ W +  +S    +++ E     E+
Sbjct: 229 SEKDNSKHHSLVLSFAFGIVVAFIISLMFLF--FWVLWHRSRLSRSHVQQDYE----FEI 282

Query: 268 GLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS 327
           G        +L RF+F +I+ AT NFS  NI+G+GG+G VYKG LP+G+ VA+KR K+  
Sbjct: 283 G--------HLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPI 334

Query: 328 AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN 387
             G+  F+ EVE+I    H NL+ L G+C+        +R++V   M NGSV D L  + 
Sbjct: 335 YTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTP-----EERMLVYPYMPNGSVADRLRDNY 389

Query: 388 G--PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           G  P L W  R SIALG ARGL YLH    P I HRD+KA
Sbjct: 390 GEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKA 429

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RY65|NIK2_ARATH Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1

 Score =  146 bits (369), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/295 (35%), Positives = 152/295 (51%), Gaps = 31/295 (10%)

Query: 146 LGNSAPCAACTTSLARL-QAYLTGPSVGNLSDCL--AYPSIYAAAAANQFGPTDT----- 197
           + N++      +SLA + Q      S  NLS  +  +    +     +Q  PT T     
Sbjct: 160 VNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVPRSLAKTFNVMGNSQICPTGTEKDCN 219

Query: 198 GTANCLFSFEFAESSKKS-----KKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSN 252
           GT     S     S  KS     K +   ++ GV + CV  LL+I  G  ++WR+R   N
Sbjct: 220 GTQPKPMSITLNSSQNKSSDGGTKNRKIAVVFGVSLTCVC-LLIIGFGFLLWWRRR--HN 276

Query: 253 RRKKR-EREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGL 311
           ++    +  E N+ EM L       NL RF F +++ AT NFS  N++G+GG+GNVYKG 
Sbjct: 277 KQVLFFDINEQNKEEMCL------GNLRRFNFKELQSATSNFSSKNLVGKGGFGNVYKGC 330

Query: 312 LPDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV 370
           L DGS +A+KR K+  +  G+  F+ E+E+I+   H NL+ L G+C  ++     +R++V
Sbjct: 331 LHDGSIIAVKRLKDINNGGGEVQFQTELEMISLAVHRNLLRLYGFCTTSS-----ERLLV 385

Query: 371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
              M NGSV   L A   P L W  R+ IALG  RGL YLH    P I HRD+KA
Sbjct: 386 YPYMSNGSVASRLKAK--PVLDWGTRKRIALGAGRGLLYLHEQCDPKIIHRDVKA 438

Involved in defense response to geminivirus infection (By similarity). Phosphorylates RPL10A in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1

 Score =  144 bits (364), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 23/202 (11%)

Query: 229 VCVVGLLLISGGVWIFWRKRVVSNR----RKKREREEVNRIEMGLESIHESTNLVRFTFD 284
           V  V L+ I+ G++++WR+R   N     +     EEV+   +G        NL RF F 
Sbjct: 255 VGTVSLIFIAVGLFLWWRQRHNQNTFFDVKDGNHHEEVS---LG--------NLRRFGFR 303

Query: 285 DIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA-AGDATFKHEVEVIAS 343
           +++ AT NFS  N++G+GGYGNVYKG+L D + VA+KR K+  A  G+  F+ EVE+I+ 
Sbjct: 304 ELQIATNNFSSKNLLGKGGYGNVYKGILGDSTVVAVKRLKDGGALGGEIQFQTEVEMISL 363

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGT 403
             H NL+ L G+CI  T     ++++V   M NGSV   + A   P L W +R+ IA+G 
Sbjct: 364 AVHRNLLRLYGFCITQT-----EKLLVYPYMSNGSVASRMKAK--PVLDWSIRKRIAIGA 416

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
           ARGL YLH    P I HRD+KA
Sbjct: 417 ARGLVYLHEQCDPKIIHRDVKA 438

Involved in defense response to geminivirus infection via regulation of the nuclear trafficking of RPL10A. Phosphorylates RPL10A in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GX23|PERK5_ARATH Proline-rich receptor-like protein kinase PERK5 OS=Arabidopsis thaliana GN=PERK5 PE=2 SV=1

 Score =  144 bits (364), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 5/149 (3%)

Query: 277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKH 336
           N   FT+D++  AT  F++ N++G+GG+G V+KG+LP G EVA+K  K  S  G+  F+ 
Sbjct: 296 NQSTFTYDELSIATEGFAQSNLLGQGGFGYVHKGVLPSGKEVAVKSLKLGSGQGEREFQA 355

Query: 337 EVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR 396
           EV++I+ V H +LV+L GYCI+     G QR++V + + N ++  HL     P L WP R
Sbjct: 356 EVDIISRVHHRHLVSLVGYCIS-----GGQRLLVYEFIPNNTLEFHLHGKGRPVLDWPTR 410

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             IALG+ARGLAYLH    P I HRDIKA
Sbjct: 411 VKIALGSARGLAYLHEDCHPRIIHRDIKA 439

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O23081|CRK41_ARATH Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=3 SV=2

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 15/224 (6%)

Query: 203 LFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEV 262
           L   E+    K    K K +IA   V  V+G  +I+  ++ F  +    NRR  ++R E 
Sbjct: 263 LLDSEYEPDPKPGNDKVKIIIA--TVCSVIGFAIIAVFLYFFMTR----NRRTAKQRHEG 316

Query: 263 NRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKR 322
             +E   E + +   L++  FD I+ AT +FSRDN +G GG+G VYKG+L  G E+A+KR
Sbjct: 317 KDLE---ELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKR 373

Query: 323 FKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDH 382
               S  GD  F +EV ++A ++H NLV L G+C     L+G +RI++ +  KN S+  +
Sbjct: 374 LSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFC-----LQGEERILIYEFFKNTSLDHY 428

Query: 383 LFASNGPK-LSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           +F SN    L W  R  I  G ARGL YLH  ++  I HRD+KA
Sbjct: 429 IFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKA 472

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q1PEM5|PERK3_ARATH Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV=2

 Score =  143 bits (360), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 119/196 (60%), Gaps = 10/196 (5%)

Query: 230 CVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKA 289
            VVG+  I GGV++      +  +++ R+ + +      +  IH+ST    FT+ ++ +A
Sbjct: 125 AVVGIS-IGGGVFVLTLIFFLCKKKRPRDDKALPAPIGLVLGIHQST----FTYGELARA 179

Query: 290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNL 349
           T  FS  N++G GG+G VYKG+L +G+EVA+K+ K  SA G+  F+ EV +I+ + H NL
Sbjct: 180 TNKFSEANLLGEGGFGFVYKGILNNGNEVAVKQLKVGSAQGEKEFQAEVNIISQIHHRNL 239

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           V+L GYCIA     G QR++V + + N ++  HL     P + W LR  IA+ +++GL+Y
Sbjct: 240 VSLVGYCIA-----GAQRLLVYEFVPNNTLEFHLHGKGRPTMEWSLRLKIAVSSSKGLSY 294

Query: 410 LHFGAQPAIFHRDIKA 425
           LH    P I HRDIKA
Sbjct: 295 LHENCNPKIIHRDIKA 310

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2

 Score =  143 bits (360), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/207 (42%), Positives = 120/207 (57%), Gaps = 13/207 (6%)

Query: 222 LIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNR---IEMG-LESIHESTN 277
           +IA VL+ C    LLI+ G+ ++WR+  V      RE++ V R    E G L S H    
Sbjct: 444 VIALVLLPCSGFFLLIALGL-LWWRRCAVMRYSSIREKQ-VTRPGSFESGDLGSFHIPGL 501

Query: 278 LVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHE 337
             +F F+++++AT NF     IG GG+G+VYKG LPD + +A+K+  N    G   F  E
Sbjct: 502 PQKFEFEELEQATENFKMQ--IGSGGFGSVYKGTLPDETLIAVKKITNHGLHGRQEFCTE 559

Query: 338 VEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ 397
           + +I ++RH NLV LRG+C       G Q ++V + M +GS+   LF+ NGP L W  R 
Sbjct: 560 IAIIGNIRHTNLVKLRGFCA-----RGRQLLLVYEYMNHGSLEKTLFSGNGPVLEWQERF 614

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIK 424
            IALGTARGLAYLH G    I H D+K
Sbjct: 615 DIALGTARGLAYLHSGCDQKIIHCDVK 641

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XI96|PERK7_ARATH Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana GN=PERK7 PE=2 SV=1

 Score =  142 bits (357), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 66/145 (45%), Positives = 97/145 (66%), Gaps = 4/145 (2%)

Query: 281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV 340
           FT++++  AT+ FS+D ++G+GG+G V+KG+LP+G E+A+K  K  S  G+  F+ EVE+
Sbjct: 324 FTYEELASATQGFSKDRLLGQGGFGYVHKGILPNGKEIAVKSLKAGSGQGEREFQAEVEI 383

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           I+ V H +LV+L GYC       G QR++V + + N ++  HL   +G  + WP R  IA
Sbjct: 384 ISRVHHRHLVSLVGYCSNA----GGQRLLVYEFLPNDTLEFHLHGKSGTVMDWPTRLKIA 439

Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           LG+A+GLAYLH    P I HRDIKA
Sbjct: 440 LGSAKGLAYLHEDCHPKIIHRDIKA 464

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	425
449466352	615	PREDICTED: probable LRR receptor-like se	0.976	0.674	0.631	1e-147
449516519	648	PREDICTED: probable LRR receptor-like se	0.924	0.606	0.642	1e-146
359479850	611	PREDICTED: probable LRR receptor-like se	0.910	0.633	0.649	1e-144
255567598	641	kinase, putative [Ricinus communis] gi|2	0.957	0.634	0.631	1e-144
224146838	681	predicted protein [Populus trichocarpa]	0.936	0.584	0.655	1e-144
224128640	599	predicted protein [Populus trichocarpa]	0.936	0.664	0.655	1e-142
224156062	435	predicted protein [Populus trichocarpa]	0.936	0.914	0.635	1e-142
356570546	636	PREDICTED: probable LRR receptor-like se	0.964	0.644	0.553	1e-133
15227189	617	putative LRR receptor-like serine/threon	0.974	0.670	0.558	1e-133
296086670	635	unnamed protein product [Vitis vinifera]	0.870	0.582	0.601	1e-133

>gi|449466352|ref|XP_004150890.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Cucumis sativus]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 272/431 (63%), Positives = 323/431 (74%), Gaps = 16/431 (3%)

Query: 1   MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKG 60
           MS    L L+LF  AS T AA    A V CPL+F  L+Q  SQ    S    +CQ ++ G
Sbjct: 1   MSLSPHLFLLLFTLASLTAAAI---AAVQCPLNFTLLRQF-SQGSAISR-SDECQYIRLG 55

Query: 61  LRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNI 120
           LRLV SQYLK TG+FLPP+N+S+SCW  YQ++V+   PNFD+RS CGFQT WIS+GCMNI
Sbjct: 56  LRLVLSQYLKLTGSFLPPVNSSDSCWNSYQSIVNVSWPNFDIRSSCGFQTGWISQGCMNI 115

Query: 121 STISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQA-YLTGPSVGNLSDCLA 179
           +T S+FER++P+S LD VV+NCNQSL + +PCA CTTSLA +QA +LTGPS+GN++DC A
Sbjct: 116 TTKSRFERIVPKSALDGVVANCNQSLESGSPCALCTTSLAIIQATFLTGPSIGNVTDCPA 175

Query: 180 YPSIYAAAAANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISG 239
           YPSIY AA  N FGPTD GTA CLFS     S     KK   ++  VL+ C V     + 
Sbjct: 176 YPSIYTAAFVNHFGPTDWGTAKCLFSLNLPSSGNSRSKKRNTVVLVVLICCGVAAAAAAV 235

Query: 240 GVWIF-WRKRVVSNRRKKREREEVNRIEMG----LESIHESTNLVRFTFDDIKKATRNFS 294
              +F WRK+    + KK +R  + R+E G    LESI  ST LV+FTFD+IK+ATRNFS
Sbjct: 236 AGGLFFWRKQ---GKVKKNDR--IGRVETGFGSGLESISASTTLVKFTFDEIKRATRNFS 290

Query: 295 RDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRG 354
           RDNIIGRGGYGNVYKG+L D SEVALKRFKNCSAAGDA F HEVEVI+SVRHVNLVA+RG
Sbjct: 291 RDNIIGRGGYGNVYKGVLLDDSEVALKRFKNCSAAGDAIFAHEVEVISSVRHVNLVAVRG 350

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA 414
           YCIATT +EGHQRIIVCDLMKNGS+YDHLF  +  +LSWP+RQ IALGTARGLAYLH+GA
Sbjct: 351 YCIATTPMEGHQRIIVCDLMKNGSLYDHLFGFSDQRLSWPIRQKIALGTARGLAYLHYGA 410

Query: 415 QPAIFHRDIKA 425
           QP+I HRDIKA
Sbjct: 411 QPSIIHRDIKA 421

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516519|ref|XP_004165294.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Cucumis sativus]

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 261/406 (64%), Positives = 312/406 (76%), Gaps = 13/406 (3%)

Query: 26  ATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESC 85
           A V CPL+F  L+Q  SQ    S    +CQ ++ GLRLV SQYLK TG+FLPP+N+S+SC
Sbjct: 56  AAVQCPLNFTLLRQF-SQGSAISR-SDECQYIRLGLRLVLSQYLKLTGSFLPPVNSSDSC 113

Query: 86  WRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQS 145
           W  YQ++V+   PNFD+RS CGFQT WIS+GCMNI+T S+FER++P+S LD VV+NCNQS
Sbjct: 114 WNSYQSIVNVSWPNFDIRSSCGFQTGWISQGCMNITTKSRFERIVPKSALDGVVANCNQS 173

Query: 146 LGNSAPCAACTTSLARLQA-YLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLF 204
           L + +PCA CTTSLA +QA +LTGPS+GN++DC AYPSIY AA  N FGPTD GTA CLF
Sbjct: 174 LESGSPCALCTTSLAIIQATFLTGPSIGNVTDCPAYPSIYTAAFVNHFGPTDWGTAKCLF 233

Query: 205 SFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIF-WRKRVVSNRRKKREREEVN 263
           S     S     KK   ++  VL+ C V +   +    +F WRK+    + KK +R  + 
Sbjct: 234 SLNLPSSGNSRSKKRNTVVLVVLICCGVAVAAAAVAGGLFFWRKQ---GKVKKNDR--IG 288

Query: 264 RIEMG----LESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVA 319
           R+E G    LESI  ST LV+FTFD+IK+ATRNFSRDNIIGRGGYGNVYKG+L D SEVA
Sbjct: 289 RVETGFGSGLESISASTTLVKFTFDEIKRATRNFSRDNIIGRGGYGNVYKGVLLDDSEVA 348

Query: 320 LKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSV 379
           LKRFKNCSAAGDA F HEVEVI+SVRHVNLVA+RGYCIATT +EGHQRIIVCDLMKNGS+
Sbjct: 349 LKRFKNCSAAGDAIFAHEVEVISSVRHVNLVAVRGYCIATTPMEGHQRIIVCDLMKNGSL 408

Query: 380 YDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           YDHLF  +  +LSWP+RQ IALGTARGLAYLH+GAQP+I HRDIKA
Sbjct: 409 YDHLFGFSDQRLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKA 454

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479850|ref|XP_003632362.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Vitis vinifera]

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/397 (64%), Positives = 308/397 (77%), Gaps = 10/397 (2%)

Query: 30  CPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNASESCWRVY 89
           CPLDF   + L++      +  +QCQ V +GLRLV + YL+ TG+FLPP+N+SESCW  Y
Sbjct: 29  CPLDF---EPLLNVTTFDVNASTQCQYVIQGLRLVLATYLQSTGSFLPPINSSESCWDSY 85

Query: 90  QTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVSNCNQSLGNS 149
           Q++V+    NF++RS CGF+T WISEGCMNI+T SQF+ ++ Q+T  D+V++CNQSL NS
Sbjct: 86  QSVVNNFTSNFNIRSDCGFETTWISEGCMNITTRSQFDAVVSQATRADIVASCNQSLENS 145

Query: 150 APCAACTTSLARLQA-YLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGTANCLFSFEF 208
           +PCA CTTSL+ LQA YLTG SVGNL+DC AYPSIYAA  AN  GPTD GTA CLF+  F
Sbjct: 146 SPCATCTTSLSNLQAVYLTGSSVGNLTDCTAYPSIYAAGFANYLGPTDPGTAKCLFNLNF 205

Query: 209 AESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKREREEVNRIEMG 268
           A     +K++   ++  V+V  VV L +I GGVW+F+RKR    R  +  + E+  IEMG
Sbjct: 206 ASGGSGNKRRGVVIVVVVVVCSVVFLAVI-GGVWVFYRKR----RESRSVKREIVNIEMG 260

Query: 269 LESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA 328
           LESI  ST L++FT D+I++ATRNF+RDNIIGRGGYGNVYKG+L DGSEVA KRFKNCSA
Sbjct: 261 LESISGSTTLIKFTIDEIRQATRNFTRDNIIGRGGYGNVYKGVLKDGSEVAFKRFKNCSA 320

Query: 329 AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG 388
           AGD  F HEVEVIASVRHVNLVALRGYC ATT LEGHQRIIVCDLMKNGS++DHLF S  
Sbjct: 321 AGDTNFAHEVEVIASVRHVNLVALRGYCTATTPLEGHQRIIVCDLMKNGSLHDHLFGST- 379

Query: 389 PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
            KLSWPLRQ IALGTARGLAYLH GAQP I HRDIKA
Sbjct: 380 EKLSWPLRQKIALGTARGLAYLHSGAQPGIIHRDIKA 416

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567598|ref|XP_002524778.1| kinase, putative [Ricinus communis] gi|223535962|gb|EEF37621.1| kinase, putative [Ricinus communis]

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/412 (63%), Positives = 306/412 (74%), Gaps = 5/412 (1%)

Query: 17  TTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQ-CQNVKKGLRLVDSQYLKRTGNF 75
           T T AA  N TVSCPL+F  L  +++  K     P+Q CQ +K GLR V S YL+ + +F
Sbjct: 21  TPTLAA--NDTVSCPLNFTILSNIIADSKPAGFGPNQECQYIKNGLRFVQSYYLQHSNSF 78

Query: 76  LPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTL 135
           LPPL++++SCWRVYQ  VD+   NFD+R+ CG+ T WISEGCMNI+T SQFE LIP S+ 
Sbjct: 79  LPPLSSAQSCWRVYQDFVDKFISNFDIRASCGYNTSWISEGCMNITTKSQFEALIPISSF 138

Query: 136 DDVVSNCNQSLGNSAPCAACTTSLARLQA-YLTGPSVGNLSDCLAYPSIYAAAAANQFGP 194
           +DV  NCNQSL N++PCAACT SL+R QA YLTG SVGNLSDC AYP+IYA A  N+FGP
Sbjct: 139 NDVAINCNQSLENNSPCAACTASLSRQQASYLTGKSVGNLSDCQAYPAIYAGAFLNRFGP 198

Query: 195 TDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWR-KRVVSNR 253
           TD GTA CLF  +F   + + KKK   +   V+V+  V L LI  G W F R K+    R
Sbjct: 199 TDRGTAKCLFLLDFEPKNPRHKKKKTLIFVLVVVILGVVLSLIISGCWYFRRIKKKTRER 258

Query: 254 RKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLP 313
            + R  E    +  GLE I EST   +F FD+IK+ATRNFSRD+IIGRGGYGNVYKG+LP
Sbjct: 259 SRNRGTEITGGLSSGLEGISESTTFAKFKFDEIKEATRNFSRDHIIGRGGYGNVYKGILP 318

Query: 314 DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL 373
           DGS+VA KRFKN SAAGDA+F HEVEVIASVRHVNLVALRGYC ATT  EGHQRIIVCDL
Sbjct: 319 DGSQVAFKRFKNLSAAGDASFAHEVEVIASVRHVNLVALRGYCTATTPFEGHQRIIVCDL 378

Query: 374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           MKNGS++DHLF     KLSWP+RQ+IALGTARGLAYLH+G QP I HRDIKA
Sbjct: 379 MKNGSLHDHLFGGVKEKLSWPIRQNIALGTARGLAYLHYGVQPGIIHRDIKA 430

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146838|ref|XP_002336349.1| predicted protein [Populus trichocarpa] gi|222834774|gb|EEE73237.1| predicted protein [Populus trichocarpa]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/406 (65%), Positives = 321/406 (79%), Gaps = 8/406 (1%)

Query: 24  RNATVSCPLDFNFLQQLMS--QFKTP-SDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLN 80
           +N T +CPLDF+ LQ L+S    + P SD+  QCQ +++GLRLV S YL+   +FLPPL+
Sbjct: 24  QNNTATCPLDFDVLQNLISAGSNRIPTSDINQQCQYIRQGLRLVQSHYLQINNSFLPPLD 83

Query: 81  ASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVS 140
           ++ESCW  YQ L+D   PNFD+RS CGF T WIS+GCMNIST SQFE ++P S L+DV S
Sbjct: 84  SAESCWSTYQVLIDGFLPNFDIRSSCGFNTSWISQGCMNISTRSQFEAIVPVSALNDVAS 143

Query: 141 NCNQSLGNSAPCAACTTSLARLQA-YLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGT 199
           NCNQSL N++PCAACTTSL+ LQA YLTG S+GN+SDC AYPSIYAAA  N++GPTD GT
Sbjct: 144 NCNQSLQNNSPCAACTTSLSTLQARYLTGSSIGNVSDCQAYPSIYAAAFTNRYGPTDKGT 203

Query: 200 ANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKRER 259
           A CLF  +F+ S K SKK++  LI GVL+   VGL+++ G  WIF +++    R  K  R
Sbjct: 204 AKCLFFLDFS-SKKSSKKRSIVLILGVLLGGGVGLVVLIGLCWIFHKRK---KRADKFGR 259

Query: 260 EEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVA 319
                +  GLESI +ST+LV++TFD+I+KATRNFSRDNIIGRGGYGNVYKG LPDGS VA
Sbjct: 260 VLETELGSGLESISQSTSLVKYTFDEIRKATRNFSRDNIIGRGGYGNVYKGELPDGSLVA 319

Query: 320 LKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSV 379
            KRFKNCSAAGD++F HEVEVIASVRHVNLVALRGYC AT+  EGHQRIIVCDL+KNG++
Sbjct: 320 FKRFKNCSAAGDSSFAHEVEVIASVRHVNLVALRGYCTATSPFEGHQRIIVCDLIKNGTL 379

Query: 380 YDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           +DHLF S   KLSWP+RQ IALGTARGLAYLH+GAQP+I HRDIKA
Sbjct: 380 HDHLFGSCAEKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKA 425

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128640|ref|XP_002320382.1| predicted protein [Populus trichocarpa] gi|222861155|gb|EEE98697.1| predicted protein [Populus trichocarpa]

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/406 (65%), Positives = 319/406 (78%), Gaps = 8/406 (1%)

Query: 24  RNATVSCPLDFNFLQQLMS-QFKTP--SDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLN 80
           +N T +CPLDFN L+ L S   K P  SD+  QC+ + +GLRLV S YL+   +FLPPL+
Sbjct: 4   QNNTATCPLDFNVLRNLTSASSKRPPTSDINQQCRYILQGLRLVQSHYLQLNNSFLPPLD 63

Query: 81  ASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVS 140
           ++ESCW  YQ L+D   PNFD+RS CGF T WIS+GCMNIST SQFE ++P S L+DV S
Sbjct: 64  SAESCWSTYQVLIDGFLPNFDIRSSCGFNTSWISQGCMNISTRSQFEAIVPVSALNDVAS 123

Query: 141 NCNQSLGNSAPCAACTTSLARLQA-YLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGT 199
           NCNQSL N++PCAACTTSL+ LQA YLTG S+GN+SDC AYPSIYAAA  N++GPTD GT
Sbjct: 124 NCNQSLQNNSPCAACTTSLSTLQARYLTGASIGNVSDCQAYPSIYAAAFTNRYGPTDKGT 183

Query: 200 ANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKRER 259
           A CLF  +F+ S K SKK++  LI GVL+   VGL+++ G  WIF +++    R  K  R
Sbjct: 184 AKCLFFLDFS-SKKSSKKRSIVLILGVLLGGGVGLVVLIGLCWIFHKRK---KRADKFGR 239

Query: 260 EEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVA 319
                +  GLESI +ST+LV++TFD+I+KATRNFSRDNIIGRGGYGNVYKG LPDGS VA
Sbjct: 240 VLETELGSGLESISQSTSLVKYTFDEIRKATRNFSRDNIIGRGGYGNVYKGELPDGSLVA 299

Query: 320 LKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSV 379
            KRFKNCSAAGD++F HEVEVIASVRHVNLVALRGYC AT+  EGHQRIIVCDL+KNG++
Sbjct: 300 FKRFKNCSAAGDSSFAHEVEVIASVRHVNLVALRGYCTATSPFEGHQRIIVCDLIKNGTL 359

Query: 380 YDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           +DHLF S   KLSWP+RQ IALGTARGLAYLH+GAQP+I HRDIKA
Sbjct: 360 HDHLFGSCAEKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKA 405

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224156062|ref|XP_002337670.1| predicted protein [Populus trichocarpa] gi|222869528|gb|EEF06659.1| predicted protein [Populus trichocarpa]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 258/406 (63%), Positives = 312/406 (76%), Gaps = 8/406 (1%)

Query: 24  RNATVSCPLDFNFLQQLMS-QFKTP--SDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLN 80
           +N T +CPLDFN L+ L S   K P  SD+  QC+ + +GLRLV S YL+   +FLPPL+
Sbjct: 24  QNNTATCPLDFNVLRNLTSASSKRPPTSDINQQCRYILQGLRLVQSHYLQLNNSFLPPLD 83

Query: 81  ASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVVS 140
           ++ESCW  YQ L+D   PNFD+RS CGF T WIS+GCMNIST SQFE ++P S L+DV S
Sbjct: 84  SAESCWSTYQVLIDGFLPNFDIRSSCGFNTSWISQGCMNISTRSQFEAIVPVSALNDVAS 143

Query: 141 NCNQSLGNSAPCAACTTSLARLQA-YLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTGT 199
           NCNQSL N++PCAACTTSL+ LQA YLTG S+GN+SDC AYPSIYAAA  N++GPTD GT
Sbjct: 144 NCNQSLENNSPCAACTTSLSTLQARYLTGASIGNVSDCQAYPSIYAAAFINRYGPTDKGT 203

Query: 200 ANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKRER 259
           A CLF  +F+      K+    ++  +L    VGL+++ G  WIF +++    R  K  R
Sbjct: 204 AKCLFLLDFSSKKSSKKRSIVLILGVLLGG-GVGLVVLIGLCWIFHKRK---KRADKFGR 259

Query: 260 EEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVA 319
                +  GLESI +ST+LV++TFD+I+KATRNFSRDNIIGRGGYGNVYKG LPDGS VA
Sbjct: 260 VLETELGSGLESISQSTSLVKYTFDEIRKATRNFSRDNIIGRGGYGNVYKGELPDGSLVA 319

Query: 320 LKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSV 379
            KRFKNCSAAGD++F HEVEVIASVRHVNLVALRGYC AT+  EGHQRIIVCDL+KNG++
Sbjct: 320 FKRFKNCSAAGDSSFAHEVEVIASVRHVNLVALRGYCTATSPFEGHQRIIVCDLIKNGTL 379

Query: 380 YDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           +DHLF S   KLSWP+RQ IALGTARGLAYLH+GAQP+I HRDIKA
Sbjct: 380 HDHLFGSCAEKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKA 425

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570546|ref|XP_003553446.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3-like [Glycine max]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/417 (55%), Positives = 303/417 (72%), Gaps = 7/417 (1%)

Query: 10  ILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYL 69
           +LFL       +   N TV CPL  + L+++    +   D  +QC  + + L L+ + YL
Sbjct: 12  VLFLTLYLPPPSLAANHTVPCPLHVDVLREVGGGRRPKFDSGTQCHYILQALHLLQADYL 71

Query: 70  KRTGNFLPPLNASESCWRVYQTLVDRVAPNF-DVRSRCGFQTDWISEGCMNISTISQFER 128
           +R+  F+PPLN+SESCW+ +Q+ ++   P+  D+R+ CGF+T+WIS+GCMN +T  +FE 
Sbjct: 72  RRSSLFVPPLNSSESCWKTFQSFINEFDPSITDIRASCGFRTEWISQGCMNFTTKQEFEE 131

Query: 129 LIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLAYPSIYAAAA 188
           ++P + +  VV++CNQ L N+APCA C T L+ + +YLTG +VGN++DC AY  IYAA+ 
Sbjct: 132 IVPPNAIQPVVADCNQPLDNNAPCALCITKLSSMLSYLTGTTVGNVTDCRAYTQIYAASL 191

Query: 189 ANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKR 248
           ++Q+G +D GTA CLF  +F+ SS    K+ K LIA V V CV+ L + +G +W + R +
Sbjct: 192 SDQYGASDPGTAKCLFGLDFS-SSGSGGKRRKILIAVVSVFCVLALAVFAG-LWAYLRFK 249

Query: 249 VVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVY 308
               +RK+        +  GL+S+++ST L+RFTFDDIKKATRNFSRDNIIG GGYGNVY
Sbjct: 250 ----KRKEVAGTTELGLGSGLDSMNQSTTLIRFTFDDIKKATRNFSRDNIIGSGGYGNVY 305

Query: 309 KGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI 368
           KG+L DGS+VA KRFKNCS AGDA+F HEVEVIASVRHVNLV LRGYC ATT LEGHQRI
Sbjct: 306 KGMLLDGSQVAFKRFKNCSVAGDASFTHEVEVIASVRHVNLVTLRGYCTATTNLEGHQRI 365

Query: 369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           IV DLM+NGS+YDHLF S    LSWP+RQ IALGTARGLAYLH+GAQP+I HRDIKA
Sbjct: 366 IVTDLMENGSLYDHLFGSAKKNLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKA 422

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227189|ref|NP_182322.1| putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] gi|75319082|sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor gi|1785621|emb|CAB06335.1| AtPK2324 [Arabidopsis thaliana] gi|2465927|gb|AAC50045.1| receptor-like serine/threonine kinase [Arabidopsis thaliana] gi|4249408|gb|AAD13705.1| putative protein kinase [Arabidopsis thaliana] gi|14335116|gb|AAK59837.1| At2g48010/T9J23.16 [Arabidopsis thaliana] gi|23308235|gb|AAN18087.1| At2g48010/T9J23.16 [Arabidopsis thaliana] gi|330255829|gb|AEC10923.1| putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/426 (55%), Positives = 303/426 (71%), Gaps = 12/426 (2%)

Query: 1   MSFLRGLVLILFLAASTTTAAAQRNATVSCPLDFNFLQQLMSQFKTPS-DLPSQCQNVKK 59
           M FLR + ++ F+    T+ +A +N+T  CPLDF+ L+     F+ P  D  + CQ + +
Sbjct: 1   MLFLRRIAVVFFV---FTSFSAAQNST--CPLDFSVLEP----FRRPKPDGATTCQYLLQ 51

Query: 60  GLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMN 119
           GLRL+ S +L++TG+FLPP  ++ SCW   Q+ V    P FDVRS CGFQT WIS+GCM+
Sbjct: 52  GLRLLYSHHLRQTGSFLPPPESAASCWAALQSSVAGFLPRFDVRSTCGFQTPWISQGCMD 111

Query: 120 ISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLA 179
           I+T SQFE LIP S+L      CN SL ++ PCA+CT SL+  Q YL+GPS+GN+SDC +
Sbjct: 112 ITTRSQFESLIPNSSLATTAMRCNTSLESNTPCASCTQSLSAFQPYLSGPSLGNVSDCAS 171

Query: 180 YPSIYAAAAANQFGPTDTGTANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISG 239
           +PSIYAAA AN  GPTD GTA CLF  + A  +     K K L++   V+ V  +L+I+ 
Sbjct: 172 FPSIYAAAFANSLGPTDKGTAKCLFQLDLASPTSSGANKVKVLVSSFSVLLVASVLVITA 231

Query: 240 GVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNII 299
             W ++ +R  S   K R+       +  L+S+ EST LV+F+FD+IKKAT NFSR NII
Sbjct: 232 --WFWYCRRKKSKLLKPRDTSLEAGTQSRLDSMSESTTLVKFSFDEIKKATNNFSRHNII 289

Query: 300 GRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIAT 359
           GRGGYGNV+KG LPDG++VA KRFKNCSA GDA F HEVEVIAS+RHVNL+ALRGYC AT
Sbjct: 290 GRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTAT 349

Query: 360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIF 419
           T  EGHQRIIVCDL+ NGS++DHLF     +L+WPLRQ IALG ARGLAYLH+GAQP+I 
Sbjct: 350 TPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSII 409

Query: 420 HRDIKA 425
           HRDIKA
Sbjct: 410 HRDIKA 415

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086670|emb|CBI32305.3| unnamed protein product [Vitis vinifera]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 245/407 (60%), Positives = 289/407 (71%), Gaps = 37/407 (9%)

Query: 20  AAAQRNATVSCPLDFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPL 79
           ++AQ N    CPLDF   + L++      +  +QCQ V +GLRLV + YL+ TG+FLPP+
Sbjct: 64  SSAQYN-LAPCPLDF---EPLLNVTTFDVNASTQCQYVIQGLRLVLATYLQSTGSFLPPI 119

Query: 80  NASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMNISTISQFERLIPQSTLDDVV 139
           N+SESCW  YQ++V+    NF++RS CGF+T WISEGCMNI+T SQF+ ++ Q+T  D+V
Sbjct: 120 NSSESCWDSYQSVVNNFTSNFNIRSDCGFETTWISEGCMNITTRSQFDAVVSQATRADIV 179

Query: 140 SNCNQSLGNSAPCAACTTSLARLQA-YLTGPSVGNLSDCLAYPSIYAAAAANQFGPTDTG 198
           ++CNQSL NS+PCA CTTSL+ LQA YLTG SVGNL+DC AYPSIYAA  AN  GPTD G
Sbjct: 180 ASCNQSLENSSPCATCTTSLSNLQAVYLTGSSVGNLTDCTAYPSIYAAGFANYLGPTDPG 239

Query: 199 TANCLFSFEFAESSKKSKKKNKGLIAGVLVVCVVGLLLISGGVWIFWRKRVVSNRRKKRE 258
           TA CLF+  FA     +K++                                        
Sbjct: 240 TAKCLFNLNFASGGSGNKRRGV-------------------------------VIVVVVV 268

Query: 259 REEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEV 318
              +  IEMGLESI  ST L++FT D+I++ATRNF+RDNIIGRGGYGNVYKG+L DGSEV
Sbjct: 269 VCSIVNIEMGLESISGSTTLIKFTIDEIRQATRNFTRDNIIGRGGYGNVYKGVLKDGSEV 328

Query: 319 ALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGS 378
           A KRFKNCSAAGD  F HEVEVIASVRHVNLVALRGYC ATT LEGHQRIIVCDLMKNGS
Sbjct: 329 AFKRFKNCSAAGDTNFAHEVEVIASVRHVNLVALRGYCTATTPLEGHQRIIVCDLMKNGS 388

Query: 379 VYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           ++DHLF S   KLSWPLRQ IALGTARGLAYLH GAQP I HRDIKA
Sbjct: 389 LHDHLFGST-EKLSWPLRQKIALGTARGLAYLHSGAQPGIIHRDIKA 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	425
TAIR|locus:2066390	617	RKF3 "receptor-like kinase in	0.974	0.670	0.514	5.2e-113
TAIR|locus:2197414	625	AT1G11050 [Arabidopsis thalian	0.350	0.238	0.503	5.2e-49
TAIR|locus:2139474	670	PERK5 "proline-rich extensin-l	0.338	0.214	0.469	2.7e-31
TAIR|locus:2093999	700	PERK6 "proline-rich extensin-l	0.338	0.205	0.463	6.7e-31
TAIR|locus:2010282	699	PERK7 "proline-rich extensin-l	0.331	0.201	0.455	8.6e-31
TAIR|locus:2005498	1196	BRI1 "BRASSINOSTEROID INSENSIT	0.336	0.119	0.453	1.8e-30
TAIR|locus:2157042	953	AT5G49760 [Arabidopsis thalian	0.329	0.146	0.448	2.1e-30
TAIR|locus:2091722	652	PERK1 "proline-rich extensin-l	0.329	0.214	0.455	2.4e-30
TAIR|locus:2036636	632	NIK3 "NSP-interacting kinase 3	0.338	0.227	0.493	2.7e-30
UNIPROTKB|Q9ARH1	647	Q9ARH1 "Receptor protein kinas	0.329	0.216	0.455	6.3e-30

TAIR|locus:2066390 RKF3 "receptor-like kinase in in flowers 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
 Identities = 219/426 (51%), Positives = 272/426 (63%)

Query:     1 MSFLRGLVLILFLXXXXXXXXXXXXXXVSCPLDFNFLQQLMSQFKTPS-DLPSQCQNVKK 59
             M FLR + ++ F+               +CPLDF+ L+     F+ P  D  + CQ + +
Sbjct:     1 MLFLRRIAVVFFVFTSFSAAQNS-----TCPLDFSVLEP----FRRPKPDGATTCQYLLQ 51

Query:    60 GLRLVDSQYLKRTGNFLPPLNASESCWRVYQTLVDRVAPNFDVRSRCGFQTDWISEGCMN 119
             GLRL+ S +L++TG+FLPP  ++ SCW   Q+ V    P FDVRS CGFQT WIS+GCM+
Sbjct:    52 GLRLLYSHHLRQTGSFLPPPESAASCWAALQSSVAGFLPRFDVRSTCGFQTPWISQGCMD 111

Query:   120 ISTISQFERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPSVGNLSDCLA 179
             I+T SQFE LIP S+L      CN SL ++ PCA+CT SL+  Q YL+GPS+GN+SDC +
Sbjct:   112 ITTRSQFESLIPNSSLATTAMRCNTSLESNTPCASCTQSLSAFQPYLSGPSLGNVSDCAS 171

Query:   180 YPSIYXXXXXNQFGPTDTGTANCLFSFEFAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 239
             +PSIY     N  GPTD GTA CLF  + A                              
Sbjct:   172 FPSIYAAAFANSLGPTDKGTAKCLFQLDLASPTSSGANKVKVLVSSFSVLLVASVLVITA 231

Query:   240 XXWIFWXXXXXXXXXXXXXXXXXXXIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNII 299
               W ++                    +  L+S+ EST LV+F+FD+IKKAT NFSR NII
Sbjct:   232 --WFWYCRRKKSKLLKPRDTSLEAGTQSRLDSMSESTTLVKFSFDEIKKATNNFSRHNII 289

Query:   300 GRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIAT 359
             GRGGYGNV+KG LPDG++VA KRFKNCSA GDA F HEVEVIAS+RHVNL+ALRGYC AT
Sbjct:   290 GRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTAT 349

Query:   360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIF 419
             T  EGHQRIIVCDL+ NGS++DHLF     +L+WPLRQ IALG ARGLAYLH+GAQP+I 
Sbjct:   350 TPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSII 409

Query:   420 HRDIKA 425
             HRDIKA
Sbjct:   410 HRDIKA 415

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2197414 AT1G11050 [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 5.2e-49, Sum P(2) = 5.2e-49
 Identities = 77/153 (50%), Positives = 106/153 (69%)

Query:   275 STNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATF 334
             +T  + F  ++++KAT NFS+ N IGRGG+G VYKG+LPDGS +A+K+       GDA F
Sbjct:   277 NTGSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEF 336

Query:   335 KHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFA---SNGPKL 391
             ++EVE+I++++H NLV LRG  +     E  QR +V D M NG++ DHLF    +    L
Sbjct:   337 RNEVEIISNLKHRNLVPLRGCSMVDDDSES-QRYLVYDYMSNGNLDDHLFPRGETTKMPL 395

Query:   392 SWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
             SWP R+SI L  A+GLAYLH+G +PAI+HRDIK
Sbjct:   396 SWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIK 428

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2139474 PERK5 "proline-rich extensin-like receptor kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 351 (128.6 bits), Expect = 2.7e-31, P = 2.7e-31
 Identities = 70/149 (46%), Positives = 97/149 (65%)

Query:   277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKH 336
             N   FT+D++  AT  F++ N++G+GG+G V+KG+LP G EVA+K  K  S  G+  F+ 
Sbjct:   296 NQSTFTYDELSIATEGFAQSNLLGQGGFGYVHKGVLPSGKEVAVKSLKLGSGQGEREFQA 355

Query:   337 EVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR 396
             EV++I+ V H +LV+L GYCI+     G QR++V + + N ++  HL     P L WP R
Sbjct:   356 EVDIISRVHHRHLVSLVGYCIS-----GGQRLLVYEFIPNNTLEFHLHGKGRPVLDWPTR 410

Query:   397 QSIALGTARGLAYLHFGAQPAIFHRDIKA 425
               IALG+ARGLAYLH    P I HRDIKA
Sbjct:   411 VKIALGSARGLAYLHEDCHPRIIHRDIKA 439

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2093999 PERK6 "proline-rich extensin-like receptor kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 6.7e-31, P = 6.7e-31
 Identities = 69/149 (46%), Positives = 98/149 (65%)

Query:   277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKH 336
             N   FT+D++  AT+ FS+  ++G+GG+G V+KG+LP+G E+A+K  K  S  G+  F+ 
Sbjct:   321 NKSTFTYDELAAATQGFSQSRLLGQGGFGYVHKGILPNGKEIAVKSLKAGSGQGEREFQA 380

Query:   337 EVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR 396
             EV++I+ V H  LV+L GYCIA     G QR++V + + N ++  HL   +G  L WP R
Sbjct:   381 EVDIISRVHHRFLVSLVGYCIA-----GGQRMLVYEFLPNDTLEFHLHGKSGKVLDWPTR 435

Query:   397 QSIALGTARGLAYLHFGAQPAIFHRDIKA 425
               IALG+A+GLAYLH    P I HRDIKA
Sbjct:   436 LKIALGSAKGLAYLHEDCHPRIIHRDIKA 464

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2010282 PERK7 "proline-rich extensin-like receptor kinase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 8.6e-31, P = 8.6e-31
 Identities = 66/145 (45%), Positives = 97/145 (66%)

Query:   281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV 340
             FT++++  AT+ FS+D ++G+GG+G V+KG+LP+G E+A+K  K  S  G+  F+ EVE+
Sbjct:   324 FTYEELASATQGFSKDRLLGQGGFGYVHKGILPNGKEIAVKSLKAGSGQGEREFQAEVEI 383

Query:   341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
             I+ V H +LV+L GYC       G QR++V + + N ++  HL   +G  + WP R  IA
Sbjct:   384 ISRVHHRHLVSLVGYCSNA----GGQRLLVYEFLPNDTLEFHLHGKSGTVMDWPTRLKIA 439

Query:   401 LGTARGLAYLHFGAQPAIFHRDIKA 425
             LG+A+GLAYLH    P I HRDIKA
Sbjct:   440 LGSAKGLAYLHEDCHPKIIHRDIKA 464

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2005498 BRI1 "BRASSINOSTEROID INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
 Identities = 68/150 (45%), Positives = 94/150 (62%)

Query:   278 LVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHE 337
             L + TF D+ +AT  F  D++IG GG+G+VYK +L DGS VA+K+  + S  GD  F  E
Sbjct:   868 LRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAE 927

Query:   338 VEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN--GPKLSWPL 395
             +E I  ++H NLV L GYC       G +R++V + MK GS+ D L      G KL+W  
Sbjct:   928 METIGKIKHRNLVPLLGYCKV-----GDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWST 982

Query:   396 RQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             R+ IA+G+ARGLA+LH    P I HRD+K+
Sbjct:   983 RRKIAIGSARGLAFLHHNCSPHIIHRDMKS 1012

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0016301 "kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0010224 "response to UV-B" evidence=IGI

GO:0005768 "endosome" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0010268 "brassinosteroid homeostasis" evidence=IEP

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0043234 "protein complex" evidence=IPI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0060548 "negative regulation of cell death" evidence=IMP

GO:1900140 "regulation of seedling development" evidence=IMP

GO:0009911 "positive regulation of flower development" evidence=IGI

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IEP;IMP

GO:0010584 "pollen exine formation" evidence=IMP

GO:0048657 "tapetal cell differentiation" evidence=IMP

GO:0048366 "leaf development" evidence=IMP

GO:0005496 "steroid binding" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016310 "phosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0009729 "detection of brassinosteroid stimulus" evidence=IMP

TAIR|locus:2157042 AT5G49760 [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
 Identities = 65/145 (44%), Positives = 95/145 (65%)

Query:   281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV 340
             FTF+++KK T NFS  N +G GGYG VY+G+LP+G  +A+KR +  S  G   FK E+E+
Sbjct:   619 FTFEELKKCTDNFSEANDVGGGGYGKVYRGILPNGQLIAIKRAQQGSLQGGLEFKTEIEL 678

Query:   341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
             ++ V H N+V L G+C      + +++++V + + NGS+ D L   +G +L W  R  IA
Sbjct:   679 LSRVHHKNVVRLLGFCF-----DRNEQMLVYEYISNGSLKDSLSGKSGIRLDWTRRLKIA 733

Query:   401 LGTARGLAYLHFGAQPAIFHRDIKA 425
             LG+ +GLAYLH  A P I HRDIK+
Sbjct:   734 LGSGKGLAYLHELADPPIIHRDIKS 758

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0044242 "cellular lipid catabolic process" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2091722 PERK1 "proline-rich extensin-like receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 2.4e-30, P = 2.4e-30
 Identities = 66/145 (45%), Positives = 96/145 (66%)

Query:   281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV 340
             FT++++ +AT  FS  N++G+GG+G V+KG+LP G EVA+K+ K  S  G+  F+ EVE+
Sbjct:   268 FTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREFQAEVEI 327

Query:   341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
             I+ V H +LV+L GYC+A     G QR++V + + N ++  HL     P + W  R  IA
Sbjct:   328 ISRVHHRHLVSLIGYCMA-----GVQRLLVYEFVPNNNLEFHLHGKGRPTMEWSTRLKIA 382

Query:   401 LGTARGLAYLHFGAQPAIFHRDIKA 425
             LG+A+GL+YLH    P I HRDIKA
Sbjct:   383 LGSAKGLSYLHEDCNPKIIHRDIKA 407

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;ISS;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009611 "response to wounding" evidence=ISS

GO:0009620 "response to fungus" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA

GO:0052546 "cell wall pectin metabolic process" evidence=RCA

TAIR|locus:2036636 NIK3 "NSP-interacting kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 2.7e-30, P = 2.7e-30
 Identities = 75/152 (49%), Positives = 100/152 (65%)

Query:   277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS-AAGDATFK 335
             +L R+TF +++ AT +F+  NI+GRGGYG VYKG L DG+ VA+KR K+C+ A G+  F+
Sbjct:   285 HLKRYTFKELRSATNHFNSKNILGRGGYGIVYKGHLNDGTLVAVKRLKDCNIAGGEVQFQ 344

Query:   336 HEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS-NG-PKLSW 393
              EVE I+   H NL+ LRG+C ++ Q    +RI+V   M NGSV   L  +  G P L W
Sbjct:   345 TEVETISLALHRNLLRLRGFC-SSNQ----ERILVYPYMPNGSVASRLKDNIRGEPALDW 399

Query:   394 PLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
               R+ IA+GTARGL YLH    P I HRD+KA
Sbjct:   400 SRRKKIAVGTARGLVYLHEQCDPKIIHRDVKA 431

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0048653 "anther development" evidence=RCA

UNIPROTKB|Q9ARH1 Q9ARH1 "Receptor protein kinase PERK1" [Brassica napus (taxid:3708)]

 Score = 338 (124.0 bits), Expect = 6.3e-30, P = 6.3e-30
 Identities = 66/145 (45%), Positives = 96/145 (66%)

Query:   281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV 340
             FT++++ +AT  FS  N++G+GG+G V+KG+LP G EVA+K+ K  S  G+  F+ EVE+
Sbjct:   263 FTYEELARATNGFSEANLLGQGGFGYVHKGVLPSGKEVAVKQLKVGSGQGEREFQAEVEI 322

Query:   341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
             I+ V H +LV+L GYCIA     G +R++V + + N ++  HL     P + W  R  IA
Sbjct:   323 ISRVHHRHLVSLVGYCIA-----GAKRLLVYEFVPNNNLELHLHGEGRPTMEWSTRLKIA 377

Query:   401 LGTARGLAYLHFGAQPAIFHRDIKA 425
             LG+A+GL+YLH    P I HRDIKA
Sbjct:   378 LGSAKGLSYLHEDCNPKIIHRDIKA 402

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P93050	RKF3_ARATH	2, ., 7, ., 1, 1, ., 1	0.5586	0.9741	0.6709	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	425
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-20
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-19
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-18
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-16
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-16
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-14
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-11
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-10
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-10
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	7e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-09
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-09
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-09
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	6e-09
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	7e-09
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-08
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-08
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-08
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	7e-08
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-07
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-07
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-07
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-07
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-07
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	9e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-06
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-06
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-06
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	5e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	6e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	7e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	3e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-05
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	4e-05
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-05
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	5e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	5e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-05
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	7e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	8e-05
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-04
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	4e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	9e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.001
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.001
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.001
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.002
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.002
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.002
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.002
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.002
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.003
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.003
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 89.6 bits (223), Expect = 1e-20
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLVALRGYC 356
           +G GG+G VY       G +VA+K  K   ++        E+E++  + H N+V L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP 416
                 + +   +V +  + GS+ D L   N  KLS      I L    GL YLH  +  
Sbjct: 61  E-----DENHLYLVMEYCEGGSLKDLL-KENEGKLSEDEILRILLQILEGLEYLH--SNG 112

Query: 417 AIFHRDIK 424
            I HRD+K
Sbjct: 113 -IIHRDLK 119

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 87.2 bits (217), Expect = 2e-19
 Identities = 46/136 (33%), Positives = 61/136 (44%), Gaps = 15/136 (11%)

Query: 296 DNIIGRGGYGNVYKGLLPDGS-----EVALKRFKN-CSAAGDATFKHEVEVIASVRHVNL 349
              +G G +G VYKG L         EVA+K  K   S      F  E  ++  + H N+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           V L G C      E     IV + M+ G +  +L   N PKLS     S AL  ARG+ Y
Sbjct: 64  VKLLGVCT-----EEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARGMEY 117

Query: 410 LHFGAQPAIFHRDIKA 425
           L   ++  I HRD+ A
Sbjct: 118 LE--SKNFI-HRDLAA 130

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 86.5 bits (215), Expect = 3e-19
 Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 13/130 (10%)

Query: 298 IIGRGGYGNVYKG-LLPDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRG 354
            +G G +G VYK      G  VA+K  K  S     D T + E+ ++  + H N+V L  
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA 414
                  L      +V +  + G ++D+L       LS    + IAL   RGL YLH   
Sbjct: 66  AFEDKDHL-----YLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLEYLH--- 115

Query: 415 QPAIFHRDIK 424
              I HRD+K
Sbjct: 116 SNGIIHRDLK 125

Length = 260

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 84.9 bits (211), Expect = 1e-18
 Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 14/136 (10%)

Query: 296 DNIIGRGGYGNVYKGLLPDGS-----EVALKRFKN-CSAAGDATFKHEVEVIASVRHVNL 349
              +G G +G VYKG L         EVA+K  K   S      F  E  ++  + H N+
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           V L G C      E    +IV + M  G + D+L  +   +LS     S AL  ARG+ Y
Sbjct: 64  VKLLGVCT-----EEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEY 118

Query: 410 LHFGAQPAIFHRDIKA 425
           L   ++  I HRD+ A
Sbjct: 119 LE--SKNFI-HRDLAA 131

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 15/139 (10%)

Query: 293 FSRDNIIGRGGYGNVYKGLL-PDGS----EVALKRFKNCSAAGDAT-FKHEVEVIASVRH 346
                 +G G +G VYKG L  DG     +VA+K  K  ++  +   F  E  ++  + H
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            N+V L G C      +G    IV + M  G + D L   +G KL+      +AL  A+G
Sbjct: 61  PNIVRLLGVC-----TQGEPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKG 114

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           + YL   ++  + HRD+ A
Sbjct: 115 MEYLE--SKNFV-HRDLAA 130

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 78.3 bits (194), Expect = 2e-16
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 20/141 (14%)

Query: 297 NIIGRGGYGNVYKGLLPDGS----EVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNLVA 351
             +G G +G VYKG L        EVA+K  K  ++  +   F  E  V+  + H N+V 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL-------FASNGPKLSWPLRQSIALGTA 404
           L G C      E     +V + M+ G + D+L        +     LS     S A+  A
Sbjct: 61  LLGVCT-----EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIA 115

Query: 405 RGLAYLHFGAQPAIFHRDIKA 425
           +G+ YL         HRD+ A
Sbjct: 116 KGMEYLA---SKKFVHRDLAA 133

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 12/134 (8%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNLV 350
           +     +G G +G VY       G  VA+K  K      D      E++++  ++H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L        +L      +V +  + G ++D L      +LS    +         L YL
Sbjct: 61  RLYDVFEDEDKL-----YLVMEYCEGGDLFDLL--KKRGRLSEDEARFYLRQILSALEYL 113

Query: 411 HFGAQPAIFHRDIK 424
           H      I HRD+K
Sbjct: 114 H---SKGIVHRDLK 124

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 70.7 bits (174), Expect = 8e-14
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 11/136 (8%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPD-GSEVALK--RFKNCSAAGDATFKHEVEVIASVRHVN 348
            ++R  ++GRG +G+VY  L  D G  +A+K       S       + E+ +++S++H N
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V   G        E +   I  + +  GS+   L      KL  P+ +        GLA
Sbjct: 61  IVRYYGSERDE---EKNTLNIFLEYVSGGSLSSLL--KKFGKLPEPVIRKYTRQILEGLA 115

Query: 409 YLHFGAQPAIFHRDIK 424
           YLH      I HRDIK
Sbjct: 116 YLH---SNGIVHRDIK 128

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 9/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V++GL  + + VA+K  K  +      F  E +++  +RH  L+ L   C  
Sbjct: 14  LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKD-FLAEAQIMKKLRHPKLIQLYAVC-- 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
            T  E     IV +LMK GS+ ++L    G  L  P    +A   A G+AYL   AQ  I
Sbjct: 71  -TLEE--PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE--AQNYI 125

Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 126 -HRDLAA 131

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 63.0 bits (154), Expect = 3e-11
 Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           IG+GG+G VYK      G EVA+K  K  S        +E++++   +H N+V   G   
Sbjct: 8   IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYG-SY 66

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH-FGAQP 416
               L+  +  IV +    GS+ D L  S    L+      +     +GL YLH  G   
Sbjct: 67  ----LKKDELWIVMEFCSGGSLKD-LLKSTNQTLTESQIAYVCKELLKGLEYLHSNG--- 118

Query: 417 AIFHRDIKA 425
            I HRDIKA
Sbjct: 119 -IIHRDIKA 126

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 62.3 bits (152), Expect = 5e-11
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA--TFKHEVEVIASVRHVN 348
           N+   ++IGRG +G VYKGL L  G  VA+K+        +A  +   E++++ +++H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V   G      +      II+ +  +NGS+   +           L         +GLA
Sbjct: 61  IVKYIGS----IETSDSLYIIL-EYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLA 113

Query: 409 YLHFGAQPAIFHRDIKA 425
           YLH   +  + HRDIKA
Sbjct: 114 YLH---EQGVIHRDIKA 127

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG+G +G+V  G    G +VA+K  K+ S A  A F  E  V+ ++RH NLV L G    
Sbjct: 14  IGKGEFGDVMLGDY-RGQKVAVKCLKDDSTAAQA-FLAEASVMTTLRHPNLVQLLGVV-- 69

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
              L+G+   IV + M  GS+ D+L +     ++   +   AL    G+ YL    +   
Sbjct: 70  ---LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNF 123

Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 124 VHRDLAA 130

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 59.4 bits (144), Expect = 6e-10
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)

Query: 293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVAL 352
           F+ +  +G G +G V++GL  +   VA+K  K+        F+ EV+ +  +RH +L++L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF 412
              C       G    I+ +LM+ GS+   L +  G  L       +A   A G+AYL  
Sbjct: 68  FAVCS-----VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE- 121

Query: 413 GAQPAIFHRDIKA 425
             +    HRD+ A
Sbjct: 122 --EQNSIHRDLAA 132

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 59.4 bits (144), Expect = 7e-10
 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 40/157 (25%)

Query: 295 RDNI-----IGRGGYGNVYKG----LLPDGSE--VALKRFKN-CSAAGDATFKHEVEVIA 342
           RD I     +G G +G V+ G    L P+  +  VA+K  K   S      F+ E E++ 
Sbjct: 4   RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLT 63

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW--------- 393
           + +H N+V   G C      EG   I+V + M++G +   L  S+GP  ++         
Sbjct: 64  NFQHENIVKFYGVC-----TEGDPPIMVFEYMEHGDLNKFL-RSHGPDAAFLKSPDSPMG 117

Query: 394 PLRQS----IALGTARGLAYL---HFGAQPAIFHRDI 423
            L  S    IA+  A G+ YL   HF       HRD+
Sbjct: 118 ELTLSQLLQIAVQIASGMVYLASQHF------VHRDL 148

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNLVALRGYCI 357
           IG+G +G+VYKG+L   +EVA+K  ++         F  E E++    H N+V L G C+
Sbjct: 3   IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV 62

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ--SIALGTARGLAYLHFGAQ 415
               +      IV +L+  GS+   L      K    +++   ++L  A G+ YL     
Sbjct: 63  QKQPI-----YIVMELVPGGSLLTFL---RKKKNRLTVKKLLQMSLDAAAGMEYLE---S 111

Query: 416 PAIFHRDIKA 425
               HRD+ A
Sbjct: 112 KNCIHRDLAA 121

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 58.7 bits (143), Expect = 1e-09
 Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 31/146 (21%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVNL 349
           + +   IG G YG VYK      G  VALK+ +  N       T   E++++  +RH N+
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI 60

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVY------DH----LFASNGPKLSWPLRQSI 399
           V L    I T+                GS+Y      DH    L  S   K +    +  
Sbjct: 61  VRL--KEIVTS-------------KGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCY 105

Query: 400 ALGTARGLAYLHFGAQPAIFHRDIKA 425
                 GL YLH      I HRDIK 
Sbjct: 106 MKQLLEGLQYLH---SNGILHRDIKG 128

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 56.9 bits (137), Expect = 3e-09
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G V+ G   +  +VA+K  +   A  +  F  E +V+  + H  LV L G C  
Sbjct: 12  IGSGQFGLVWLGYWLEKRKVAIKTIRE-GAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTE 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
            + +      +V + M++G + D+L A  G K S      + L    G+AYL       +
Sbjct: 71  RSPI-----CLVFEFMEHGCLSDYLRAQRG-KFSQETLLGMCLDVCEGMAYLE---SSNV 121

Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 122 IHRDLAA 128

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 9/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  + + +A F  E +++  +RH  LV L  Y + 
Sbjct: 14  LGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEA-FLQEAQIMKKLRHDKLVQL--YAVC 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           +   E     IV + M  GS+ D L +  G KL  P    +A   A G+AYL        
Sbjct: 71  S---EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNY 124

Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 125 IHRDLAA 131

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 56.3 bits (137), Expect = 7e-09
 Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 19/138 (13%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVRHVN 348
           + +   +G G YG VYK      G  VALK+ +  +   +   +T   E+ ++  ++H N
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-EGIPSTALREISLLKELKHPN 59

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYD--HLFASNGPKLSWPLRQSIALGTARG 406
           +V L        +L      +V +        D           LS  L +SI     RG
Sbjct: 60  IVKLLDVIHTERKL-----YLVFEYCD----MDLKKYLDKRPGPLSPNLIKSIMYQLLRG 110

Query: 407 LAYLHFGAQPAIFHRDIK 424
           LAY H      I HRD+K
Sbjct: 111 LAYCH---SHRILHRDLK 125

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 17/135 (12%)

Query: 297 NIIGRGGYGNVYKGL-LPDGSEVALKR--FKNCSAAGDATFKHEVEVIASVRHVNLVALR 353
            +IG G    VY  + LP+  +VA+KR   + C  + D   + EV+ ++   H N+V   
Sbjct: 7   EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVD-ELRKEVQAMSQCNHPNVV--- 62

Query: 354 GYCIATTQLEGHQRIIVCDLMKNGSVYD---HLFASNGPKLSWPLRQSIALGTARGLAYL 410
            Y   T+ + G +  +V   +  GS+ D     +   G  L   +  ++     +GL YL
Sbjct: 63  KY--YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGG--LDEAIIATVLKEVLKGLEYL 118

Query: 411 HFGAQPAIFHRDIKA 425
           H   Q    HRDIKA
Sbjct: 119 HSNGQ---IHRDIKA 130

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + +A F  E  ++  ++H  LV L  Y + 
Sbjct: 14  LGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEA-FLAEANLMKQLQHPRLVRL--YAVV 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L    G KL+      +A   A G+A++    +   
Sbjct: 71  TQE----PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNY 123

Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 124 IHRDLRA 130

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 26/139 (18%)

Query: 298 IIGRGGYGNVYKGL-LPDGS----EVALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLVA 351
           ++G G +G VYKG+ +P+G      VA+K  +  ++         E  V+ASV H ++V 
Sbjct: 14  VLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR 73

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF---ASNGPK--LSWPLRQSIALGTARG 406
           L G C+        Q  ++  LM  G + D++     + G +  L+W       +  A+G
Sbjct: 74  LLGICL------SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW------CVQIAKG 121

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           ++YL    +  + HRD+ A
Sbjct: 122 MSYLE---EKRLVHRDLAA 137

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 54.2 bits (131), Expect = 3e-08
 Identities = 42/127 (33%), Positives = 58/127 (45%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           IG G YG+VYK   +  G  VA+K  K          + E+ ++   RH N+VA  G   
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFG--- 67

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA 417
             + L   +  IV +    GS+ D    + GP LS      +   T +GLAYLH   +  
Sbjct: 68  --SYLRRDKLWIVMEYCGGGSLQDIYQVTRGP-LSELQIAYVCRETLKGLAYLH---ETG 121

Query: 418 IFHRDIK 424
             HRDIK
Sbjct: 122 KIHRDIK 128

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 54.4 bits (129), Expect = 5e-08
 Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 15/131 (11%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRH-VNLVALRG 354
           +G G +G VY     D   VALK         +     F  E++++AS+ H  N+V L  
Sbjct: 8   LGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYD 65

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHL-FASNGPKLSWPLRQSIALGTARGLAYLHFG 413
           +       +     +V + +  GS+ D L        LS      I       L YLH  
Sbjct: 66  FFQ-----DEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH-- 118

Query: 414 AQPAIFHRDIK 424
               I HRDIK
Sbjct: 119 -SKGIIHRDIK 128

Length = 384

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 34/148 (22%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAAGDAT-----FKHEVEVIASVR 345
           N+ R  ++G+G +G VY     D G E+A+K+      + +        + E++++ +++
Sbjct: 3   NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ 62

Query: 346 HVNLVALRGYCIATTQLEGHQRI-----IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           H  +V          Q  G  R      I  + M  GSV D L      K    L +++ 
Sbjct: 63  HERIV----------QYYGCLRDDETLSIFMEYMPGGSVKDQL------KAYGALTETVT 106

Query: 401 LGTAR----GLAYLHFGAQPAIFHRDIK 424
               R    G+ YLH      I HRDIK
Sbjct: 107 RKYTRQILEGVEYLH---SNMIVHRDIK 131

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 52.6 bits (126), Expect = 1e-07
 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 16/138 (11%)

Query: 293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKH------EVEVIASVRH 346
           +++  ++G+G YG VY GL   G  +A+K+ +  ++   A  K       EV+++ S++H
Sbjct: 2   WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
           VN+V   G C+    +      I  + +  GS+   +    GP L  P+          G
Sbjct: 62  VNIVQYLGTCLDDNTIS-----IFMEFVPGGSI-SSILNRFGP-LPEPVFCKYTKQILDG 114

Query: 407 LAYLHFGAQPAIFHRDIK 424
           +AYLH      + HRDIK
Sbjct: 115 VAYLH---NNCVVHRDIK 129

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 33/153 (21%)

Query: 294 SRDNI-----IGRGGYGNVYKGLL----PDGSE--VALK-RFKNCSAAGDATFKHEVEVI 341
            RD+I     +G G +G VY+GL      D  E  VA+K   ++CS   ++ F  E  ++
Sbjct: 4   PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM 63

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWP--LRQS- 398
           +   H N+V L G        E   R I+ +LM  G +   L   N P+   P  L    
Sbjct: 64  SKFNHQNIVRLIGVS-----FERLPRFILLELMAGGDLKSFL-RENRPRPERPSSLTMKD 117

Query: 399 ---IALGTARGLAYL---HFGAQPAIFHRDIKA 425
               A   A+G  YL   HF       HRDI A
Sbjct: 118 LLFCARDVAKGCKYLEENHF------IHRDIAA 144

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 18/139 (12%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD--ATFKHEVEVIASVRHV-- 347
           + R  +IGRG YG VY+G  +P G  VALK   N     D  +  + EV +++ +R    
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKII-NLDTPDDDVSDIQREVALLSQLRQSQP 61

Query: 348 -NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            N+    G     + L+G +  I+ +  + GSV   + A     ++      I       
Sbjct: 62  PNITKYYG-----SYLKGPRLWIIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVA 113

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           L Y+H   +  + HRDIKA
Sbjct: 114 LKYIH---KVGVIHRDIKA 129

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 14/137 (10%)

Query: 294 SRDNIIGRGGYGNVYKGLL--PDGSE--VALKRFK-NCSAAGDATFKHEVEVIASVRHVN 348
           + + +IG G +G V +G L  P   E  VA+K  K   S      F  E  ++    H N
Sbjct: 7   TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPN 66

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           ++ L G    +  +     +I+ + M+NGS+   L  ++G K +      +  G A G+ 
Sbjct: 67  IIRLEGVVTKSRPV-----MIITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMK 120

Query: 409 YLHFGAQPAIFHRDIKA 425
           YL   ++    HRD+ A
Sbjct: 121 YL---SEMNYVHRDLAA 134

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 19/144 (13%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLP-----DGSEVALKRFK-NCSAAGDATFKHEVEVIASV 344
           R+      +G G +G V            G +VA+K    +      + F+ E+E++ ++
Sbjct: 4   RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL 63

Query: 345 RHVNLVALRGYCIATTQLEGHQRIIVCDLMK---NGSVYDHLFASNGPKLSWPLRQSIAL 401
            H N+V  +G C      E      +  +M+   +GS+ D+L   +  +++       + 
Sbjct: 64  DHENIVKYKGVC------EKPGGRSLRLIMEYLPSGSLRDYL-QRHRDQINLKRLLLFSS 116

Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
              +G+ YL  G+Q  I HRD+ A
Sbjct: 117 QICKGMDYL--GSQRYI-HRDLAA 137

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 22/135 (16%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT-----FKHEVEVIASVRHVNLVAL 352
           +G G +G+VY+GL L DG   A+K                  + E+ +++ ++H N+V  
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR---GLAY 409
            G     T+ E     I  +L+  GS+   L    G     P+   I L T +   GL Y
Sbjct: 68  LG-----TEREEDNLYIFLELVPGGSLAK-LLKKYGS-FPEPV---IRLYTRQILLGLEY 117

Query: 410 LHFGAQPAIFHRDIK 424
           LH        HRDIK
Sbjct: 118 LH---DRNTVHRDIK 129

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     ++VA+K  K  +   +A F  E +++  +RH  LV L  Y + 
Sbjct: 14  LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEA-FLQEAQIMKKLRHDKLVPL--YAVV 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L   +G  L  P    +A   A G+AY+    +   
Sbjct: 71  SEE----PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNY 123

Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 124 IHRDLRA 130

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 50.7 bits (122), Expect = 5e-07
 Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 17/138 (12%)

Query: 292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKH----EVEVIASVRH 346
           +  R  ++G+G  G VYK    P G   ALK+       GD  F+     E++ + S   
Sbjct: 2   DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIH---VDGDEEFRKQLLRELKTLRSCES 58

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
             +V   G      ++      IV + M  GS+ D L    G K+  P+   IA    +G
Sbjct: 59  PYVVKCYGAFYKEGEIS-----IVLEYMDGGSLAD-LLKKVG-KIPEPVLAYIARQILKG 111

Query: 407 LAYLHFGAQPAIFHRDIK 424
           L YLH   +  I HRDIK
Sbjct: 112 LDYLH--TKRHIIHRDIK 127

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 14/137 (10%)

Query: 294 SRDNI-----IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN 348
            R++I     +G G +G V+ G   + ++VA+K  K  + +  A F  E  ++ +++H  
Sbjct: 4   PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDK 62

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           LV L  Y + T +       I+ + M  GS+ D L +  G K+  P     +   A G+A
Sbjct: 63  LVRL--YAVVTKE---EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 117

Query: 409 YLHFGAQPAIFHRDIKA 425
           Y+    +    HRD++A
Sbjct: 118 YIE---RKNYIHRDLRA 131

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 50.4 bits (120), Expect = 6e-07
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 14  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 71  SEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 123

Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 124 VHRDLRA 130

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 49.4 bits (118), Expect = 9e-07
 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G      +VA+K  +  + + D  F  E +V+  + H NLV L G C  
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSED-DFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
              +      IV + M NG + ++L    G KL       +       + YL        
Sbjct: 71  QRPI-----FIVTEYMANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLE---SNGF 121

Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 122 IHRDLAA 128

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 37/134 (27%), Positives = 51/134 (38%), Gaps = 12/134 (8%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
           F     +G G YG+VYK +    G  VA+K         +     E+ ++       +V 
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQE--IIKEISILKQCDSPYIVK 62

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
             G     T L      IV +    GSV D +       L+     +I   T +GL YLH
Sbjct: 63  YYGSYFKNTDL-----WIVMEYCGAGSVSD-IMKITNKTLTEEEIAAILYQTLKGLEYLH 116

Query: 412 FGAQPAIFHRDIKA 425
                   HRDIKA
Sbjct: 117 SN---KKIHRDIKA 127

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  + + ++ F  E +++  +RH  LV L  Y + 
Sbjct: 14  LGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPES-FLEEAQIMKKLRHDKLVQL--YAVV 70

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 71  SEE----PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNY 123

Query: 419 FHRDIKA 425
            HRD+++
Sbjct: 124 IHRDLRS 130

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 48.5 bits (115), Expect = 3e-06
 Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 22/167 (13%)

Query: 263 NRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYK-GLLPDGSEVALK 321
           N   +GLES+ + T+    T++ I+           IG+G YG VYK     DGS  A+K
Sbjct: 8   NSSMLGLESLGDPTD----TWEIIET----------IGKGTYGKVYKVTNKKDGSLAAVK 53

Query: 322 RFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVY 380
                S   D   + E  ++ S+  H N+V   G      +L G Q  +V +L   GSV 
Sbjct: 54  ILDPISDV-DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVT 112

Query: 381 DHL--FASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           + +      G +L   +   I  G   GL +LH      I HRD+K 
Sbjct: 113 ELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKG 156

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 47.9 bits (114), Expect = 4e-06
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 16/140 (11%)

Query: 298 IIGRGGYGNVYKGLL--PDGS--EVALKRFK--NCSAAGDATFKHEVEVIASVRHVNLVA 351
           I+G G +G+V +G L   DGS  +VA+K  K    + +    F  E   +    H N++ 
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK 65

Query: 352 LRGYCIATTQLEGHQR-IIVCDLMKNGSVYDHLFAS---NGPKLSWPLRQSI--ALGTAR 405
           L G C   + L+   + +++   MK+G ++  L  S     P+   PL+  +   +  A 
Sbjct: 66  LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPE-KLPLQTLLKFMVDIAL 124

Query: 406 GLAYLHFGAQPAIFHRDIKA 425
           G+ YL   +     HRD+ A
Sbjct: 125 GMEYL---SNRNFIHRDLAA 141

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 22/142 (15%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVRH 346
           F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 347 VNLVALRGYCIATT-QLEGHQRIIVCDLMKNGSVYDHLFASNGPKL--SWPLRQSIALGT 403
            ++  L G C+ +T QL       +  LM  G + D++   +   +   + L   + +  
Sbjct: 69  PHVCRLLGICLTSTVQL-------ITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQI-- 118

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
           A+G+ YL    +  + HRD+ A
Sbjct: 119 AKGMNYLE---ERRLVHRDLAA 137

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 40/163 (24%)

Query: 293 FSRDNI-----IGRGGYGNVYK----GLLPDGSE--VALKRFKN-CSAAGDATFKHEVEV 340
           + R+NI     IG+G +G V++    GLLP      VA+K  K   SA   A F+ E  +
Sbjct: 2   YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 61

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL----------------- 383
           +A   H N+V L G C       G    ++ + M  G + + L                 
Sbjct: 62  MAEFDHPNIVKLLGVCA-----VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSS 116

Query: 384 ---FASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDI 423
                 N   LS   +  IA   A G+AYL   ++    HRD+
Sbjct: 117 ARKCGLNPLPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDL 156

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 47.5 bits (113), Expect = 5e-06
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 27/145 (18%)

Query: 297 NIIGRGGYGNVYKG----LLPDGSE---VALKRFKNCSAAGD-ATFKHEVEVIASVRHVN 348
           N +G G +G VY+G    +L  GS    VA+K  +  +   +   F  E  ++++  H N
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ-----SIALGT 403
           +V L G C     L    + I+ +LM+ G +  +L  +   +   PL        I L  
Sbjct: 61  IVKLLGVC-----LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDV 115

Query: 404 ARGLAYL---HFGAQPAIFHRDIKA 425
           A+G  YL   HF       HRD+ A
Sbjct: 116 AKGCVYLEQMHF------IHRDLAA 134

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 47.4 bits (112), Expect = 6e-06
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 28/145 (19%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNCSA-AGDATFKHEVEVIASVRH 346
             R  ++G G +G VYKG+ +P+G      VA+K     +    +  F  E  ++AS+ H
Sbjct: 9   LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 68

Query: 347 VNLVALRGYCIA-TTQLEGHQRIIVCDLMKNGSV--YDHLFASN-GPK--LSWPLRQSIA 400
            +LV L G C++ T QL       V  LM +G +  Y H    N G +  L+W ++    
Sbjct: 69  PHLVRLLGVCLSPTIQL-------VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQ---- 117

Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
              A+G+ YL    +  + HRD+ A
Sbjct: 118 --IAKGMMYLE---ERRLVHRDLAA 137

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 47.3 bits (112), Expect = 7e-06
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 35/148 (23%)

Query: 299 IGRGGYGNVY----KGLLPDGSE--VALKRFKNCSAAGDATFKHEVEVIASVRHVNLVAL 352
           +G G +G V+      LLP+  +  VA+K  K  S +    F+ E E++  ++H ++V  
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP--------------KLSWPLRQS 398
            G C      EG   ++V + M++G + +    S+GP              +L+     +
Sbjct: 73  YGVCT-----EGRPLLMVFEYMRHGDL-NRFLRSHGPDAKILAGGEDVAPGQLTLGQMLA 126

Query: 399 IALGTARGLAY---LHFGAQPAIFHRDI 423
           IA   A G+ Y   LHF       HRD+
Sbjct: 127 IASQIASGMVYLASLHF------VHRDL 148

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 47.7 bits (113), Expect = 7e-06
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSE-VALKRFKNCSAAGDATFKH-EVEVIASV 344
           +   +++   NIIG G +G VY+ +  D SE VA+K+        D  +K+ E+ ++ ++
Sbjct: 62  RSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQ-----DPQYKNRELLIMKNL 116

Query: 345 RHVNLVALRGYCIATTQLEGHQRIIVCDLMK--NGSVYDHL--FASNGPKLSWPLRQSIA 400
            H+N++ L+ Y       +  + I +  +M+    +V+ ++  +A N   L   L +  +
Sbjct: 117 NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYS 176

Query: 401 LGTARGLAYLHFGAQPAIFHRDIK 424
               R LAY+H      I HRD+K
Sbjct: 177 YQLCRALAYIH---SKFICHRDLK 197

Length = 440

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 17/140 (12%)

Query: 292 NFSRDNIIGRGGYGNVYK-GLLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVN 348
           +F     +G+G YG+VYK   L D    ALK     + S        +E+ ++ASV H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ----SIALGTA 404
           ++           L+G++  IV +    G +   +  S   K    + +     I +   
Sbjct: 61  II-----SYKEAFLDGNKLCIVMEYAPFGDLSKAI--SKRKKKRKLIPEQEIWRIFIQLL 113

Query: 405 RGLAYLHFGAQPAIFHRDIK 424
           RGL  LH   +  I HRD+K
Sbjct: 114 RGLQALH---EQKILHRDLK 130

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 46.3 bits (111), Expect = 1e-05
 Identities = 34/144 (23%), Positives = 50/144 (34%), Gaps = 25/144 (17%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR--FKNCSAAGDATFKHEVEVIASVRHVN 348
            +     IG+G +G VY      DG    LK     N S        +EV+++  + H N
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPK--------LSWPLRQSIA 400
           ++         +  E  +  IV +    G +   +               L W   Q + 
Sbjct: 61  IIKYYE-----SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDW-FVQ-LC 113

Query: 401 LGTARGLAYLHFGAQPAIFHRDIK 424
           L     L YLH      I HRDIK
Sbjct: 114 L----ALKYLH---SRKILHRDIK 130

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 33/139 (23%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFK--------NCSAAGDATFKHEVEVIASVRHVNL 349
           IG G YG VYK      G  VA+K+ K          +A        E++++  + H N+
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTAL------REIKLLKELNHPNI 60

Query: 350 VALRGYCIATTQLE--GHQR--IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR 405
           + L         L+   H+    +V + M    +Y  +       L   L +S      +
Sbjct: 61  IKL---------LDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRG-LPESLIKSYLYQLLQ 109

Query: 406 GLAYLHFGAQPAIFHRDIK 424
           GLA+ H      I HRD+K
Sbjct: 110 GLAFCH---SHGILHRDLK 125

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 298 IIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           IIG G +G V +G    G +VA+K  K C     A F  E  V+  + H NLV L G  +
Sbjct: 13  IIGEGEFGAVLQGEYT-GQKVAVKNIK-CDVTAQA-FLEETAVMTKLHHKNLVRLLGVIL 69

Query: 358 ATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP 416
                  H  + IV +LM  G++ + L       +S       +L  A G+ YL      
Sbjct: 70  -------HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SK 119

Query: 417 AIFHRDIKA 425
            + HRD+ A
Sbjct: 120 KLVHRDLAA 128

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 42/143 (29%), Positives = 53/143 (37%), Gaps = 21/143 (14%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR------ 345
           F    +IG G YG VYK      G  VA+K         D     E E+           
Sbjct: 8   FELVEVIGEGTYGKVYKARHKKTGQLVAIKIM-------DIIEDEEEEIKEEYNILRKYS 60

Query: 346 -HVNLVALRG-YCIATTQLEGHQRIIVCDLMKNGSVYDHL--FASNGPKLSWPLRQSIAL 401
            H N+    G +          Q  +V +L   GSV D +      G +L       I  
Sbjct: 61  NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILR 120

Query: 402 GTARGLAYLHFGAQPAIFHRDIK 424
            T RGLAYLH   +  + HRDIK
Sbjct: 121 ETLRGLAYLH---ENKVIHRDIK 140

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 45.7 bits (108), Expect = 2e-05
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 298 IIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
            IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH NLV L G  +
Sbjct: 13  TIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 69

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA 417
                E     IV + M  GS+ D+L +     L        +L     + YL       
Sbjct: 70  E----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANN 122

Query: 418 IFHRDIKA 425
             HRD+ A
Sbjct: 123 FVHRDLAA 130

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 22/135 (16%)

Query: 299 IGRGGYGNVYKG--LLPDGSE--VALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVALR 353
           +G G +G+V KG  L+  G E  VA+K  K    AAG   F  E  V+A + H  +V L 
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL--- 410
           G C      +G   ++V +L   G +  +L      ++     + +A   A G+AYL   
Sbjct: 63  GVC------KGEPLMLVMELAPLGPLLKYL--KKRREIPVSDLKELAHQVAMGMAYLESK 114

Query: 411 HFGAQPAIFHRDIKA 425
           HF       HRD+ A
Sbjct: 115 HF------VHRDLAA 123

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 3e-05
 Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 32/139 (23%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKH--------EVEVIASV-RHVN 348
           +G G +G+VY       G  VA+K+ K         F          EV+ +  +  H N
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKMKK-------KFYSWEECMNLREVKSLRKLNEHPN 59

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V L+       +L  +    V + M  G++Y  +    G   S  + +SI     +GLA
Sbjct: 60  IVKLKEVFRENDEL--Y---FVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLA 113

Query: 409 YLH---FGAQPAIFHRDIK 424
           ++H   F      FHRD+K
Sbjct: 114 HIHKHGF------FHRDLK 126

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 39/153 (25%)

Query: 299 IGRGGYGNVYKG--LLPDGSE----VALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVA 351
           +G G +G VYKG    P+       VA+K  K N        F+ E E+++ ++H N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 352 LRGYCIATTQLEGHQRIIVCDL---MKNGSVYDHL----------FASNGPKLSWPLRQS 398
           L G C         +    C L   + +G +++ L            S    +   L  S
Sbjct: 73  LLGVCT--------KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS 124

Query: 399 ----IALGTARGLAYL--HFGAQPAIFHRDIKA 425
               IA+  A G+ YL  H        HRD+ A
Sbjct: 125 DFLHIAIQIAAGMEYLSSHH-----FVHRDLAA 152

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 45.1 bits (106), Expect = 3e-05
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 32/155 (20%)

Query: 292 NFSRDNII-----GRGGYGNVY----KGLLPDGSE--VALKRFKNCSAAGDATFKHEVEV 340
           +  R NI+     G G +G V+      L P+  +  VA+K  K+ S      F  E E+
Sbjct: 1   HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 60

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP----------- 389
           + +++H ++V   G C+     EG   I+V + MK+G + +    ++GP           
Sbjct: 61  LTNLQHEHIVKFYGVCV-----EGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNRP 114

Query: 390 -KLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDI 423
            +L+      IA   A G+ YL   A     HRD+
Sbjct: 115 AELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDL 146

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 297 NIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
           + +G G YG VY+G+       VA+K  K  +   +  F  E  V+  ++H NLV L G 
Sbjct: 12  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 70

Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL---HF 412
           C            I+ + M  G++ D+L   N  +++  +   +A   +  + YL   +F
Sbjct: 71  CTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 125

Query: 413 GAQPAIFHRDIKA 425
                  HRD+ A
Sbjct: 126 ------IHRDLAA 132

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 21/145 (14%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEV-ALKRFK-NCSAAGD---------ATFKHEVEV 340
            + +  +IG+G YG VY  L     E+ A+K+ +   + AG             + E+E 
Sbjct: 2   KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIET 61

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           +  + H+N+V   G+      L      I  + +  GS+   L      +    L +   
Sbjct: 62  LKDLDHLNIVQYLGFETTEEYLS-----IFLEYVPGGSIGSCL--RTYGRFEEQLVRFFT 114

Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
                GLAYLH      I HRD+KA
Sbjct: 115 EQVLEGLAYLH---SKGILHRDLKA 136

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 28/140 (20%)

Query: 298 IIGRGGYGNVYKGL-LPDGSE----VALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVA 351
           ++G G +G VYKG+ +PDG      VA+K  + N S   +     E  V+A V    +  
Sbjct: 14  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR 73

Query: 352 LRGYCIATT-QLEGHQRIIVCDLMKNGSVYDHLFASNG-----PKLSWPLRQSIALGTAR 405
           L G C+ +T QL       V  LM  G + D++  +         L+W ++       A+
Sbjct: 74  LLGICLTSTVQL-------VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ------IAK 120

Query: 406 GLAYLHFGAQPAIFHRDIKA 425
           G++YL    +  + HRD+ A
Sbjct: 121 GMSYLE---EVRLVHRDLAA 137

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKH---EVEVIASVRHVNLVALRG 354
           +G G  G V K L  P G  +A+K  +      +A  K    E++++       +V   G
Sbjct: 9   LGAGNSGVVSKVLHRPTGKIMAVKTIR--LEINEAIQKQILRELDILHKCNSPYIVGFYG 66

Query: 355 YCIATTQLEGHQRIIVC-DLMKNGSVYDHLFASNGPKLSWPLRQ--SIALGTARGLAYLH 411
                        I +C + M  GS+   L    G     P R    IA+   +GL YLH
Sbjct: 67  AFYNNGD------ISICMEYMDGGSLDKILKEVQGR---IPERILGKIAVAVLKGLTYLH 117

Query: 412 FGAQPAIFHRDIK 424
              +  I HRD+K
Sbjct: 118 --EKHKIIHRDVK 128

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 10/130 (7%)

Query: 296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
           +  +G G +G V+       ++VA+K  K  S + +A F  E  V+ +++H  LV L  +
Sbjct: 11  EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL--H 67

Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
            + T +       I+ + M  GS+ D L +  G K   P     +   A G+A++    Q
Sbjct: 68  AVVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 120

Query: 416 PAIFHRDIKA 425
               HRD++A
Sbjct: 121 RNYIHRDLRA 130

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 31/146 (21%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSE-VALK--RFKNCSAAGDATFKHEVEVIASVRHVN 348
            F + N IG G YG VY+       E VALK  R  N       +   E+ ++ ++RH N
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVY------DHLFASNGPKLSWPLRQS---- 398
           +V L+   +    L+              S++      +   AS    +  P  +S    
Sbjct: 68  IVELK-EVVVGKHLD--------------SIFLVMEYCEQDLASLLDNMPTPFSESQVKC 112

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIK 424
           + L   RGL YLH   +  I HRD+K
Sbjct: 113 LMLQLLRGLQYLH---ENFIIHRDLK 135

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 11/137 (8%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEV-ALKR--FKNCSAAGDATFKHEVEVIASVRHVN 348
           +F   N IG+G +G V+K +      V A+K+      +         E  V+A +    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           ++  R Y    + L+  +  IV +  +NG ++  L    G  L         +    GLA
Sbjct: 61  II--RYY---ESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA 115

Query: 409 YLHFGAQPAIFHRDIKA 425
           +LH      I HRDIK+
Sbjct: 116 HLH---SKKILHRDIKS 129

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 44.2 bits (104), Expect = 7e-05
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 8/147 (5%)

Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVI 341
           FD     +  +     IG+G YG V+K L   +GS+ A+K         D   + E  ++
Sbjct: 10  FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI-DEEIEAEYNIL 68

Query: 342 ASVR-HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--FASNGPKLSWPLRQS 398
            ++  H N+V   G         G Q  +V +L   GSV D +  F   G ++  P+   
Sbjct: 69  KALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAY 128

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIKA 425
           I      GL +LH        HRD+K 
Sbjct: 129 ILHEALMGLQHLH---VNKTIHRDVKG 152

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 43.8 bits (103), Expect = 7e-05
 Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 16/132 (12%)

Query: 298 IIGRGGYGNVYKGLLPDGSEVALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
           ++G+G +G V+KG L D + VA+K  K +        F  E  ++    H N+V L G C
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61

Query: 357 IATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSI--ALGTARGLAYLHFG 413
              TQ    Q I IV +L+  G   D L      K     +Q +  AL  A G+AYL   
Sbjct: 62  ---TQ---RQPIYIVMELVPGG---DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLE-- 110

Query: 414 AQPAIFHRDIKA 425
                 HRD+ A
Sbjct: 111 -SKNCIHRDLAA 121

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 43.9 bits (104), Expect = 8e-05
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 28/153 (18%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPD------GSEVALKRFKNCSAAGDAT-FKHEVEV 340
             R+ I     +G+G +G VY+GL          + VA+K     ++  +   F +E  V
Sbjct: 3   LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASV 62

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-----ASNGPKLSWPL 395
           +      ++V L G         G   ++V +LM  G +  +L      A N P L  P 
Sbjct: 63  MKEFNCHHVVRLLGVV-----STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPT 117

Query: 396 RQSI---ALGTARGLAYLHFGAQPAIFHRDIKA 425
            Q     A   A G+AYL   A     HRD+ A
Sbjct: 118 LQKFIQMAAEIADGMAYL---AAKKFVHRDLAA 147

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 14/141 (9%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR---FKNCSAAGDATFKHEVEVIASVR 345
             NF  +  IG+G +  VYK + L DG  VALK+   F+   A        E++++  + 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--FASNGPKLSWPLRQSIALGT 403
           H N++         + +E ++  IV +L   G +   +  F      +         +  
Sbjct: 61  HPNVI-----KYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQL 115

Query: 404 ARGLAYLHFGAQPAIFHRDIK 424
              L ++H      I HRDIK
Sbjct: 116 CSALEHMH---SKRIMHRDIK 133

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 13/137 (9%)

Query: 299 IGRGGYGNVYKGLLPDGS---EVALKRFKN--CSAAGDATFKHEVEVIASVRHVNLVALR 353
           +G G +G+V +G L       +VA+K  K   C+ +    F  E   +    H N++ L 
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 354 GYCIATTQLEGHQR-IIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGT--ARGLA 408
           G C+ T + EG+   +++   MK+G ++  L  S         P +  +   T  A G+ 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126

Query: 409 YLHFGAQPAIFHRDIKA 425
           YL   +  +  HRD+ A
Sbjct: 127 YL---SSKSFIHRDLAA 140

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 43.6 bits (103), Expect = 1e-04
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 32/146 (21%)

Query: 296 DNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKH--------------EVEV 340
              +G G YG V K      G  VA+K+ K    + D T                 E+++
Sbjct: 14  GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKI 73

Query: 341 IASVRHVNLVALRG-YCIATTQLEGHQRIIVCDLMKNGSVYD--HLFASNGPKLSWPLRQ 397
           +  ++H N++ L   Y       EG    +V D+M      D   +      +L+    +
Sbjct: 74  MNEIKHENIMGLVDVYV------EGDFINLVMDIMA----SDLKKVVDRK-IRLTESQVK 122

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDI 423
            I L    GL  LH   +    HRD+
Sbjct: 123 CILLQILNGLNVLH---KWYFMHRDL 145

Length = 335

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 40/202 (19%)

Query: 228 VVCVVG---LLLISGGVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFD 284
           + C +G   +L +    ++F R R  +N   KR   E    E+      +S      T +
Sbjct: 632 ITCTLGAFLVLALVAFGFVFIRGR--NNLELKRVENEDGTWELQF---FDSKVSKSITIN 686

Query: 285 DIKKATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDATFKHEVEVIAS 343
           DI  + +    +N+I RG  G  YKG  + +G +  +K   +     ++    E+  +  
Sbjct: 687 DILSSLKE---ENVISRGKKGASYKGKSIKNGMQFVVKEINDV----NSIPSSEIADMGK 739

Query: 344 VRHVNLVALRGYCIATTQ-------LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR 396
           ++H N+V L G C +          +EG     + ++++N              LSW  R
Sbjct: 740 LQHPNIVKLIGLCRSEKGAYLIHEYIEGKN---LSEVLRN--------------LSWERR 782

Query: 397 QSIALGTARGLAYLHFGAQPAI 418
           + IA+G A+ L +LH    PA+
Sbjct: 783 RKIAIGIAKALRFLHCRCSPAV 804

Length = 968

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 19/141 (13%)

Query: 289 ATRNFS---RDNIIGRGGYGNVYKGL-LPDGSEVALKR-FKNCSAAGDATFKHEVEVIAS 343
           A ++ S   R N IG G  G VYK +  P G   ALK  + N           E+E++  
Sbjct: 69  AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD 128

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGT 403
           V H N+V          +++     ++ + M  GS+     A     L+   RQ ++   
Sbjct: 129 VNHPNVVKCHDMFDHNGEIQ-----VLLEFMDGGSLEGTHIADE-QFLADVARQILS--- 179

Query: 404 ARGLAYLHFGAQPAIFHRDIK 424
             G+AYLH   +  I HRDIK
Sbjct: 180 --GIAYLH---RRHIVHRDIK 195

Length = 353

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 11/129 (8%)

Query: 299 IGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAG-DATFKHEVEVIASVRHVNLVALRGYC 356
           IGRG +G V+ G L  D + VA+K  +        A F  E  ++    H N+V L G C
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP 416
                 +     IV +L++ G     L  + GP+L       +    A G+ YL      
Sbjct: 63  T-----QKQPIYIVMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLE---SK 113

Query: 417 AIFHRDIKA 425
              HRD+ A
Sbjct: 114 HCIHRDLAA 122

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 19/132 (14%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           +G G YG+VYK   L  G   A+K  K       +  + E+ ++   +H N+VA  G  +
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP----KLSWPLRQSIALGTARGLAYLHFG 413
           +  +L      I  +    GS+ D ++   GP    ++++  R+     T +GLAYLH  
Sbjct: 77  SREKL-----WICMEYCGGGSLQD-IYHVTGPLSELQIAYVCRE-----TLQGLAYLHSK 125

Query: 414 AQPAIFHRDIKA 425
            +    HRDIK 
Sbjct: 126 GK---MHRDIKG 134

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 14/137 (10%)

Query: 294 SRDNIIGRGGYGNVYKGLL--PDGSE--VALKRFK-NCSAAGDATFKHEVEVIASVRHVN 348
           ++  +IG G +G V++G+L  P   E  VA+K  K   +      F  E  ++    H N
Sbjct: 8   TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN 67

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           ++ L G     T+ +    +I+ + M+NG++  +L   +G   S+ L   +  G A G+ 
Sbjct: 68  IIRLEG---VVTKFK--PAMIITEYMENGALDKYLRDHDGEFSSYQL-VGMLRGIAAGMK 121

Query: 409 YLHFGAQPAIFHRDIKA 425
           YL   +     HRD+ A
Sbjct: 122 YL---SDMNYVHRDLAA 135

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 19/138 (13%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD--ATFKHEVEVIASVRHVNL 349
           F+    IG+G +G VYK +       VA+K   +   A D     + E++ ++  R   +
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVI-DLEEAEDEIEDIQQEIQFLSQCRSPYI 61

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGL 407
               G     + L+G +  I+ +    GS  D L     +   +++ LR+        GL
Sbjct: 62  TKYYG-----SFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILRE-----VLLGL 111

Query: 408 AYLHFGAQPAIFHRDIKA 425
            YLH   +  I HRDIKA
Sbjct: 112 EYLH--EEGKI-HRDIKA 126

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 13/133 (9%)

Query: 295 RDNIIGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
           R N IG G +G VY  + L  G  +A+K  R ++           E++V+  ++H NLV 
Sbjct: 4   RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVK 63

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
             G      ++   +  I  +    G++ +     +G  L   + +   L    GLAYLH
Sbjct: 64  YYG-----VEVHREKVYIFMEYCSGGTLEE--LLEHGRILDEHVIRVYTLQLLEGLAYLH 116

Query: 412 FGAQPAIFHRDIK 424
                 I HRDIK
Sbjct: 117 ---SHGIVHRDIK 126

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 30/146 (20%)

Query: 299 IGRGGYGNVY----KGLLP--DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVAL 352
           +G G +G V+      L P  D   VA+K  K+ + A    F+ E E++ +++H ++V  
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKL-----SWPLRQSIALG----- 402
            G C      +G   I+V + MK+G +   L A +GP         P +    LG     
Sbjct: 73  YGVCG-----DGDPLIMVFEYMKHGDLNKFLRA-HGPDAMILVDGQPRQAKGELGLSQML 126

Query: 403 -----TARGLAYLHFGAQPAIFHRDI 423
                 A G+ YL   A     HRD+
Sbjct: 127 HIASQIASGMVYL---ASQHFVHRDL 149

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%)

Query: 293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVA 351
           F    ++G G YG VYKG      ++A  +  + +   +   K E+ ++     H N+  
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 352 LRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
             G  I         ++ +V +    GSV D +  + G  L       I     RGL++L
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 411 HFGAQPAIFHRDIKA 425
           H   Q  + HRDIK 
Sbjct: 128 H---QHKVIHRDIKG 139

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 41.5 bits (98), Expect = 5e-04
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 25/150 (16%)

Query: 289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA--TFKHEVEVIASVR 345
             R++     +G G +G VYK   +  G  VALK+    +       T   E++++  ++
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVY------DH----LFASNGPKLSWPL 395
           H N+V L    +        +R         GSVY      DH    L  +   KL+   
Sbjct: 66  HPNVVPLIDMAVERPDKSKRKR---------GSVYMVTPYMDHDLSGLLENPSVKLTESQ 116

Query: 396 RQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
            +   L    G+ YLH   +  I HRDIKA
Sbjct: 117 IKCYMLQLLEGINYLH---ENHILHRDIKA 143

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 40.8 bits (95), Expect = 7e-04
 Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 5/135 (3%)

Query: 293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVAL 352
           F    ++G G YG VYKG      ++A  +  + +   +   K E+ ++    H   +A 
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIAT 77

Query: 353 RGYCIATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
                      GH  Q  +V +    GSV D +  + G  L       I     RGLA+L
Sbjct: 78  YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137

Query: 411 HFGAQPAIFHRDIKA 425
           H      + HRDIK 
Sbjct: 138 H---AHKVIHRDIKG 149

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 40.7 bits (96), Expect = 9e-04
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           IG G  G VYK      G EVA+K+ +      +     E+ ++   +H N+V       
Sbjct: 27  IGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIIN-EILIMKDCKHPNIVDYYD--- 82

Query: 358 ATTQLEGHQRIIVCDLMKNGS----VYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFG 413
             + L G +  +V + M  GS    +  +    N P++++  R+ +     +GL YLH  
Sbjct: 83  --SYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVL-----QGLEYLH-- 133

Query: 414 AQPAIFHRDIK 424
           +Q  I HRDIK
Sbjct: 134 SQNVI-HRDIK 143

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 315 GSEVALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL 373
           G  VA+K  K  C     + +K E+ ++ ++ H N+V  +G C   ++  G    ++ + 
Sbjct: 33  GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCC---SEQGGKGLQLIMEY 89

Query: 374 MKNGSVYDHLFASNGPKLSWPLRQSI--ALGTARGLAYLHFGAQPAIFHRDIKA 425
           +  GS+ D+L     PK    L Q +  A     G+AYLH  +Q  I HRD+ A
Sbjct: 90  VPLGSLRDYL-----PKHKLNLAQLLLFAQQICEGMAYLH--SQHYI-HRDLAA 135

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 14/134 (10%)

Query: 299 IGRGGYGNVYKGLL---PDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVRHVNLVAL 352
           IGRG YG VYK       DG E A+K+FK           +   E+ ++  ++H N+V+L
Sbjct: 8   IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67

Query: 353 RGYCIATTQLEGHQRIIVC--DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
               +       +        DL     +      +    +   + +S+      G+ YL
Sbjct: 68  VEVFLEHADKSVYLLFDYAEHDL---WQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL 124

Query: 411 HFGAQPAIFHRDIK 424
           H      + HRD+K
Sbjct: 125 H---SNWVLHRDLK 135

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 19/137 (13%)

Query: 296 DNIIGRGGYGNVYKG----LLPDGSEVALKRFKNCSAAGDA-TFKHEVEVIASVRHVNLV 350
              IG G +G+VY+G       +   VA+K  KNC++      F  E  ++    H ++V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSI--ALGTARGLA 408
            L G          +   IV +L   G +  +L  +   K S  L   I  +   +  LA
Sbjct: 71  KLIGVI------TENPVWIVMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALA 121

Query: 409 YLHFGAQPAIFHRDIKA 425
           YL         HRDI A
Sbjct: 122 YLE---SKRFVHRDIAA 135

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 25/135 (18%)

Query: 299 IGRGGYGNVYKGLLPDGSE-VALKRFKNCSAAGDA--TFKHEVEVIASVRHVNLVALRGY 355
           +G G YG V K       E VA+K+FK      D   T   EV+V+  +RH N+V L+  
Sbjct: 9   VGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEA 68

Query: 356 CIATTQLE------GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
                +L           + + +    G   D +         W L         + +AY
Sbjct: 69  FRRKGRLYLVFEYVERTLLELLEASPGGLPPDAV-----RSYIWQL--------LQAIAY 115

Query: 410 LHFGAQPAIFHRDIK 424
            H      I HRDIK
Sbjct: 116 CH---SHNIIHRDIK 127

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 17/136 (12%)

Query: 297 NIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGD-ATFKHEVEVIASVRHVNLVA 351
            +IG+G +G VY G L   DG ++  A+K     +   +   F  E  ++    H N+++
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALG--TARGLAY 409
           L G C+ +   EG   ++V   MK+G + +  F  +    +  ++  I  G   A+G+ Y
Sbjct: 61  LLGICLPS---EGSP-LVVLPYMKHGDLRN--FIRS-ETHNPTVKDLIGFGLQVAKGMEY 113

Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 114 L---ASKKFVHRDLAA 126

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 28/144 (19%)

Query: 295 RDNIIGRGGYGNVYKGL--------------LPDGSEVALKRFKNCSAAGDATFKHEVEV 340
           +  +IG G +G+VY G+              LP  S  +  R ++   A       E+ +
Sbjct: 4   KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDA----LAREIAL 59

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           +  ++H N+V   G  +    L      I  + +  GSV   L  +N       L ++  
Sbjct: 60  LKELQHENIVQYLGSSLDADHLN-----IFLEYVPGGSVAALL--NNYGAFEETLVRNFV 112

Query: 401 LGTARGLAYLHFGAQPAIFHRDIK 424
               +GL YLH      I HRDIK
Sbjct: 113 RQILKGLNYLH---NRGIIHRDIK 133

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           IG G YG+VYK   +  G   A+K  K       A  + E+ ++   +H N+VA  G   
Sbjct: 17  IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFG--- 73

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA 417
             + L   +  I  +    GS+ D ++   GP LS      ++  T +GL YLH   +  
Sbjct: 74  --SYLRRDKLWICMEFCGGGSLQD-IYHVTGP-LSESQIAYVSRETLQGLYYLHSKGK-- 127

Query: 418 IFHRDIKA 425
             HRDIK 
Sbjct: 128 -MHRDIKG 134

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 16/133 (12%)

Query: 299 IGRGGYGNVYKG--LLPDGS--EVALKRFK--NCSAAGDATFKHEVEVIASVRHVNLVAL 352
           +G G +G V +G      G    VA+K  K    S   D  F  E  ++ S+ H NL+ L
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMD-DFLKEAAIMHSLDHENLIRL 61

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF 412
            G  +       H  ++V +L   GS+ D L                A+  A G+ YL  
Sbjct: 62  YGVVLT------HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE- 114

Query: 413 GAQPAIFHRDIKA 425
                  HRD+ A
Sbjct: 115 --SKRFIHRDLAA 125

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 13/137 (9%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDAT--FKHEVEVIASVRHVN 348
             F++   IG+G +G VYKG+     EV   +  +   A D     + E+ V++      
Sbjct: 4   ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +    G     + L+G +  I+ + +  GS  D L    GP L      +I     +GL 
Sbjct: 64  ITRYYG-----SYLKGTKLWIIMEYLGGGSALDLL--KPGP-LEETYIATILREILKGLD 115

Query: 409 YLHFGAQPAIFHRDIKA 425
           YLH   +    HRDIKA
Sbjct: 116 YLHSERK---IHRDIKA 129

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 39/158 (24%)

Query: 293 FSRDN-----IIGRGGYGNVY----KGLLPDGSE--VALKRFKN------CSAAGDATFK 335
           F R N      +GRG +G V+    KG+  +G E  V +K  +        S      F+
Sbjct: 2   FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSE-----FR 56

Query: 336 HEVEVIASVRHVNLVALRGYCIATTQLEGHQRII-VCDLMKNGSVYDHLFASNG------ 388
            E+++   + H N+V L G C    + E H  I+   DL   G +   L A+        
Sbjct: 57  RELDMFRKLSHKNVVRLLGLC---REAEPHYMILEYTDL---GDLKQFLRATKSKDEKLK 110

Query: 389 -PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
            P LS   + ++    A G+ +L   +     HRD+ A
Sbjct: 111 PPPLSTKQKVALCTQIALGMDHL---SNARFVHRDLAA 145

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 38.7 bits (91), Expect = 0.004
 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 24/143 (16%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA-----TFKHEVEVIASVR 345
            + +   +G G Y  VYK      G  VA+K+ K             T   E++++  ++
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 346 HVNLVALRGYCIATTQLEGHQRII--VCDLMKNGSVYD--HLFASNGPKLSWPLRQSIAL 401
           H N++ L         + GH+  I  V + M+     D   +       L+    +S  L
Sbjct: 61  HPNIIGLL-------DVFGHKSNINLVFEFME----TDLEKVIKDKSIVLTPADIKSYML 109

Query: 402 GTARGLAYLHFGAQPAIFHRDIK 424
            T RGL YLH      I HRD+K
Sbjct: 110 MTLRGLEYLH---SNWILHRDLK 129

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	425
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.92
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.92
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.91
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.91
KOG3653	534	consensus Transforming growth factor beta/activin	99.89
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.89
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.87
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.87
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.85
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.85
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.85
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.85
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.84
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.83
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.83
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.83
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.82
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.82
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.82
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.82
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.82
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.82
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.82
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.82
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.82
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.81
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.81
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.81
KOG0198	313	consensus MEKK and related serine/threonine protei	99.81
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.81
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.81
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.8
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.8
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.8
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.8
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.8
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.8
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.8
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.8
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.8
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.8
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.8
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.79
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.79
PHA02988	283	hypothetical protein; Provisional	99.79
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.79
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.79
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.79
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.79
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.79
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.79
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.79
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.79
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.79
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.79
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.79
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.79
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.79
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.79
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.79
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.79
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.79
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.79
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.79
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.78
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.78
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.78
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.78
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.78
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.78
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.78
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.78
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.78
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.78
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.78
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.78
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.78
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.78
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.78
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.78
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.78
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.78
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.78
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.78
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.78
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.78
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.78
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.78
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.78
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.78
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.78
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.78
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.77
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.77
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.77
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.77
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.77
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.77
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.77
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.77
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.77
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.77
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.77
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.77
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.77
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.77
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.77
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.77
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.77
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.77
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.77
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.77
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.77
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.77
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.77
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.77
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.77
PTZ00267	478	NIMA-related protein kinase; Provisional	99.77
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.77
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.77
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.77
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.77
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.77
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.77
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.76
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.76
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.76
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.76
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.76
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.76
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.76
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.76
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.76
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.76
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.76
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.76
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.76
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.76
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.76
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.76
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.76
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.76
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.76
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.76
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.76
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.76
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.76
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.76
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.76
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.76
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.76
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.76
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.76
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.75
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.75
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.75
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.75
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.75
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.75
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.75
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.75
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.75
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.75
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.75
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.75
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.75
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.75
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.75
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.75
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.75
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.75
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.75
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.75
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.75
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.75
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.75
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.75
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.75
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.75
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.75
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.75
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.75
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.75
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.75
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.75
KOG0578	550	consensus p21-activated serine/threonine protein k	99.75
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.75
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.75
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.75
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.75
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.75
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.75
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.75
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.74
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.74
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.74
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.74
PHA03212	391	serine/threonine kinase US3; Provisional	99.74
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.74
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.74
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.74
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.74
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.74
KOG0605	550	consensus NDR and related serine/threonine kinases	99.74
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.74
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.74
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.74
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.74
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.74
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.74
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.74
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.74
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.74
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.74
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.74
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.74
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.74
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.73
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.73
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.73
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.73
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.73
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.73
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.73
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.73
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.73
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.73
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.73
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.73
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.73
PTZ00036	440	glycogen synthase kinase; Provisional	99.73
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.73
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.73
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.73
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.73
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.73
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.73
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.73
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.73
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.73
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.73
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.73
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.73
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.72
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.72
PTZ00283	496	serine/threonine protein kinase; Provisional	99.72
PHA03211	461	serine/threonine kinase US3; Provisional	99.72
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.72
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.72
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.72
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.72
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.72
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.72
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.72
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.72
PHA03209	357	serine/threonine kinase US3; Provisional	99.72
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.72
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.72
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.72
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.72
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.72
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.72
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.72
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.72
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.72
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.72
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.72
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.72
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.72
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.72
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.72
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.71
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.71
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.71
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.71
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.71
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.71
PLN00009	294	cyclin-dependent kinase A; Provisional	99.71
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.71
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.71
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.71
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.71
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.71
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.7
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.7
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.7
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.7
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.7
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.7
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.7
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.7
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.7
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.7
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.7
PTZ00284	467	protein kinase; Provisional	99.7
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.7
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.69
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.69
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.69
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.69
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.69
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.69
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.69
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.69
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.68
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.68
PHA03207	392	serine/threonine kinase US3; Provisional	99.68
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.68
KOG0610	459	consensus Putative serine/threonine protein kinase	99.68
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.68
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.68
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.68
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.68
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.68
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.68
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.68
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.68
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.68
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.68
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.67
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.67
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.67
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.67
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.67
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.67
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.67
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.67
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.67
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.67
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.67
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.66
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.66
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.66
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.66
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.66
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.66
KOG0589	426	consensus Serine/threonine protein kinase [General	99.66
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.66
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.65
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.65
KOG0586	596	consensus Serine/threonine protein kinase [General	99.65
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.65
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.65
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.65
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.65
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.65
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.64
PRK09188	365	serine/threonine protein kinase; Provisional	99.64
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.64
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.64
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.64
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.64
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.64
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.63
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.63
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.63
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.63
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.63
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.62
KOG0584	632	consensus Serine/threonine protein kinase [General	99.62
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.61
PRK10345	210	hypothetical protein; Provisional	99.61
PHA03210	501	serine/threonine kinase US3; Provisional	99.61
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.6
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.6
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.6
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.59
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.59
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.58
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.57
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.57
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.56
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.56
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.56
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.55
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.52
PHA02882	294	putative serine/threonine kinase; Provisional	99.52
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.51
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.51
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.49
PRK14879	211	serine/threonine protein kinase; Provisional	99.49
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.49
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.49
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.48
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.47
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.46
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.46
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.46
KOG1152	772	consensus Signal transduction serine/threonine kin	99.45
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.45
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.44
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.44
smart00090	237	RIO RIO-like kinase.	99.42
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.4
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.38
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.37
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.36
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.34
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.34
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.34
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.32
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.3
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.3
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.29
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.28
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.23
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.21
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.2
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.18
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.14
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.13
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.13
PRK12274	218	serine/threonine protein kinase; Provisional	99.1
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.1
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.09
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.08
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.07
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.01
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.98
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.93
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.89
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.58
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.53
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.48
PLN00181	793	protein SPA1-RELATED; Provisional	98.44
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.24
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.19
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.15
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.13
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.07
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.05
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.95
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.87
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.83
KOG3087	229	consensus Serine/threonine protein kinase [General	97.76
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.68
PRK09902	216	hypothetical protein; Provisional	97.63
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.57
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.48
KOG1243	690	consensus Protein kinase [General function predict	97.38
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.37
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.23
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.1
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.9
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.82
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.63
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.58
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	96.52
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.52
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.51
PLN02876	822	acyl-CoA dehydrogenase	96.32
PF01636	239	APH: Phosphotransferase enzyme family This family	96.02
PRK10593	297	hypothetical protein; Provisional	95.92
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.49
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	95.23
KOG0606	1205	consensus Microtubule-associated serine/threonine	95.18
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	94.96
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.85
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	94.79
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	94.56
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	93.64
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	93.49
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	93.38
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	93.15
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.71
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	91.19
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	87.28
PLN03150	623	hypothetical protein; Provisional	87.24
KOG0576	829	consensus Mitogen-activated protein kinase kinase	86.78
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	85.37
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	84.75
KOG0606	1205	consensus Microtubule-associated serine/threonine	82.89
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	81.82

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=296.42  Aligned_cols=144  Identities=53%  Similarity=0.953  Sum_probs=131.5

Q ss_pred             CcccccHHHHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEE
Q 048791          277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYC  356 (425)
Q Consensus       277 ~~~~f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~  356 (425)
                      ....|+++|+++||++|+..++||+|+||.||+|.+++|+.||||++.....+..++|.+|++++++++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            56679999999999999999999999999999999999999999998764433156799999999999999999999999


Q ss_pred             eeccccCCc-eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          357 IATTQLEGH-QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       357 ~~~~~~~~~-~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .     +++ +++||||||+||+|.++|+......|+|.+|++||.|+|+||+|||+++.++||||||||
T Consensus       141 ~-----e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKs  205 (361)
T KOG1187|consen  141 L-----EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKS  205 (361)
T ss_pred             e-----cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCH
Confidence            8     555 599999999999999999885443799999999999999999999999999999999996

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.92  E-value=6e-25  Score=247.48  Aligned_cols=128  Identities=27%  Similarity=0.529  Sum_probs=109.7

Q ss_pred             ccHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeec
Q 048791          281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIAT  359 (425)
Q Consensus       281 f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~  359 (425)
                      ++++++.   ..+...++||+|+||.||+|+. .+|..||||+++.....    ...|++.+++++|||||+++|+|.  
T Consensus       683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~--  753 (968)
T PLN00113        683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCR--  753 (968)
T ss_pred             hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEE--
Confidence            4555554   4577789999999999999985 67999999998753322    235688999999999999999997  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         +.+..++|||||++|+|.++++     .++|..+.+|+.|||+||+|||+.++++|+||||||
T Consensus       754 ---~~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp  811 (968)
T PLN00113        754 ---SEKGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSP  811 (968)
T ss_pred             ---cCCCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCH
Confidence               4556799999999999999994     389999999999999999999988899999999997

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-24  Score=217.99  Aligned_cols=122  Identities=34%  Similarity=0.574  Sum_probs=105.6

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCccc--hHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc-eEEEEEe
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAG--DATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH-QRIIVCD  372 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~--~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~-~~~LV~E  372 (425)
                      .+.||+|+||+||+|.++....||||++.......  .++|.+|+.+|.+++|||||+++|.|..     .. ...||||
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~-----~~~~~~iVtE  120 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTS-----PPGSLCIVTE  120 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCCceEEEEE
Confidence            35599999999999999644449999997543222  4699999999999999999999999973     32 5799999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA-IFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~-IiHRDLKp  425 (425)
                      ||++|+|.++|+......++|..+++||.|||+||.|||   +.. ||||||||
T Consensus       121 y~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~  171 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKS  171 (362)
T ss_pred             eCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccCh
Confidence            999999999998755678999999999999999999999   666 99999997

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.91  E-value=2.7e-24  Score=210.29  Aligned_cols=126  Identities=24%  Similarity=0.373  Sum_probs=111.2

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ..+|...+.||+|.||+||+|++ .++.+||||.+...  .....+....|+.+|++++|+|||+|+.++.     .++.
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-----~~~~   83 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE-----DDDF   83 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-----cCCe
Confidence            34566677799999999999996 46899999999654  3444567889999999999999999999998     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+||||||.+|+|.+|++..  +.++......++.|+|.||++||   +++||||||||
T Consensus        84 i~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKP  137 (429)
T KOG0595|consen   84 IYLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLH---ENNIIHRDLKP  137 (429)
T ss_pred             EEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCc
Confidence            89999999999999999754  47999999999999999999999   99999999998

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.91  E-value=1.3e-24  Score=225.82  Aligned_cols=141  Identities=27%  Similarity=0.452  Sum_probs=121.3

Q ss_pred             CCcccccHHHHHHHhcCcc---------cceeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHH
Q 048791          276 TNLVRFTFDDIKKATRNFS---------RDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVI  341 (425)
Q Consensus       276 ~~~~~f~~~ei~~at~~f~---------~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il  341 (425)
                      .....++|+|--+|.+.|.         .+++||.|.||.||+|.++    ....||||.+|... .....+|+.|..||
T Consensus       605 ~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIM  684 (996)
T KOG0196|consen  605 TYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIM  684 (996)
T ss_pred             eecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhc
Confidence            3445678888777776664         4689999999999999964    24579999999654 45567999999999


Q ss_pred             hhCCCCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 048791          342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHR  421 (425)
Q Consensus       342 ~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHR  421 (425)
                      +++.||||++|.|...     .....+||.|||+||+|+.||+.+. ..++|.+...+..|||.||.||.   +.++|||
T Consensus       685 GQFdHPNIIrLEGVVT-----ks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLs---dm~YVHR  755 (996)
T KOG0196|consen  685 GQFDHPNIIRLEGVVT-----KSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLS---DMNYVHR  755 (996)
T ss_pred             ccCCCCcEEEEEEEEe-----cCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHh---hcCchhh
Confidence            9999999999999997     5667899999999999999998755 55999999999999999999998   9999999


Q ss_pred             CCCC
Q 048791          422 DIKA  425 (425)
Q Consensus       422 DLKp  425 (425)
                      ||.+
T Consensus       756 DLAA  759 (996)
T KOG0196|consen  756 DLAA  759 (996)
T ss_pred             hhhh
Confidence            9974

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=2.1e-23  Score=207.05  Aligned_cols=126  Identities=33%  Similarity=0.477  Sum_probs=105.2

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhh--CCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIAS--VRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~--l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +....++||+|.||.||||++. ++.||||++..   +....|.+|-++++.  ++|+||+++++.-..-+. .+.+.+|
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~-~~~eywL  285 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA-DRMEYWL  285 (534)
T ss_pred             chhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCc-cccceeE
Confidence            3444578999999999999994 59999999964   344688999888874  589999999998654332 2458899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFG------AQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~------~~~~IiHRDLKp  425 (425)
                      |+||.++|||.+||..   ..++|....+|+..+|+||+|||++      .+|+|+|||||+
T Consensus       286 Vt~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkS  344 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKS  344 (534)
T ss_pred             EeeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccc
Confidence            9999999999999954   4699999999999999999999954      468999999995

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=4.3e-23  Score=208.07  Aligned_cols=123  Identities=32%  Similarity=0.497  Sum_probs=110.7

Q ss_pred             ccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEec
Q 048791          294 SRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      ...+.||+|.||.|+.|.++....||||.++... ...++|.+|+++|.+|+|+|||+++|+|.     ++++.+||+||
T Consensus       209 ~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~-----~~~piyIVtE~  282 (468)
T KOG0197|consen  209 KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCT-----KQEPIYIVTEY  282 (468)
T ss_pred             HHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEe-----cCCceEEEEEe
Confidence            3457799999999999999877799999998743 33568999999999999999999999998     45578999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |++|+|.+||....+..+.-.+.+.++.|||+||+||+   ++++|||||.|
T Consensus       283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAA  331 (468)
T KOG0197|consen  283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAA  331 (468)
T ss_pred             cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhh
Confidence            99999999998766778999999999999999999999   99999999975

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.87  E-value=1.6e-22  Score=213.28  Aligned_cols=127  Identities=30%  Similarity=0.486  Sum_probs=110.0

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      .+....+.||+|.||+||+|+.      .+.+.||||.+++.... ...+|.+|++++++++|+|||+|+|.|.     +
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~-----~  560 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR-----E  560 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc-----c
Confidence            3445567799999999999984      24568999999975544 6789999999999999999999999998     7


Q ss_pred             CceEEEEEecCCCCCHHHHHhcC--------C----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFAS--------N----GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~--------~----~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++.++|+|||.+|||.+||...        .    +.+|+-.+.+.||.|||.||+||-   +..+|||||.+
T Consensus       561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLAT  631 (774)
T KOG1026|consen  561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLAT  631 (774)
T ss_pred             CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhh
Confidence            88899999999999999999742        1    234899999999999999999998   99999999963

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.5e-22  Score=203.92  Aligned_cols=126  Identities=30%  Similarity=0.456  Sum_probs=108.0

Q ss_pred             cCcccceeecccCcccEEeeecCC--C---CeeEEeeecC---CCccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD--G---SEVALKRFKN---CSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~--g---~~VAVK~l~~---~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      ++....++||+|.||.||+|.+..  +   ..||||..+.   .......+|++|.++|++++|+|||+++|++.     
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~-----  231 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV-----  231 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-----
Confidence            344445899999999999999642  2   2389999985   23455689999999999999999999999998     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...+.+||||+|+||+|.+||.... ..++..+++.++.++|+||+|||   +.++|||||.+
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAA  290 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAA  290 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhH
Confidence            5667899999999999999997643 36999999999999999999999   99999999964

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.85  E-value=1.4e-21  Score=197.82  Aligned_cols=125  Identities=26%  Similarity=0.431  Sum_probs=109.4

Q ss_pred             cccceeecccCcccEEeeecCCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +...++||+|.||.|..++...+..||||+++.... ....+|.+|+.+|++++|||||+|+|.|.     .++...+|+
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~-----~DePicmI~  614 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCV-----QDDPLCMIT  614 (807)
T ss_pred             eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeee-----cCCchHHHH
Confidence            444688999999999999998889999999986543 44589999999999999999999999998     455679999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+||+|.+|+.....+.+.-..-+.|+.|||.||+||.   +.++|||||.+
T Consensus       615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~  665 (807)
T KOG1094|consen  615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLAT  665 (807)
T ss_pred             HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccc
Confidence            9999999999997765555566677889999999999999   99999999975

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=2.4e-21  Score=189.69  Aligned_cols=125  Identities=23%  Similarity=0.430  Sum_probs=105.8

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccc-------hHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAG-------DATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~-------~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      +.|-..+.||+|+||.|-+|. -.+|+.||||.++.....+       .....+|+++|.+++|||||++.+++.     
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~-----  246 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE-----  246 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee-----
Confidence            446667899999999999997 5689999999997532211       223469999999999999999999997     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+..|+|||||++|+|.+++..+  +.+....-..++.|++.|+.|||   +.+|+||||||
T Consensus       247 ~~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKP  304 (475)
T KOG0615|consen  247 VPDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKP  304 (475)
T ss_pred             cCCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHH---HcCcccccCCc
Confidence            455679999999999999999654  35677777889999999999999   99999999998

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=4.5e-21  Score=189.34  Aligned_cols=128  Identities=32%  Similarity=0.503  Sum_probs=107.6

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhh--CCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIAS--VRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~--l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .+.....+.||+|.||.||+|.+ .|+.||||++..   .+++++.+|.|+...  |||+||+.+++.-..+.. .-.+.
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g-s~TQL  284 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNG-SWTQL  284 (513)
T ss_pred             hheeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCC-ceEEE
Confidence            34567789999999999999999 488999999954   345678899999885  499999998887654332 34588


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-----CCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-----GAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~-----~~~~~IiHRDLKp  425 (425)
                      +||.||.|+|||.|||..   ..++-...++++..+|.||++||.     .-+|.|.|||||+
T Consensus       285 wLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS  344 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS  344 (513)
T ss_pred             EEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence            999999999999999943   579999999999999999999993     3579999999995

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=5.9e-21  Score=194.97  Aligned_cols=124  Identities=27%  Similarity=0.453  Sum_probs=111.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ..|...+.||+|||..+|+++- ..|+.||+|++.+.   .....+...+||++.++|+|||||++++|+.     +.+.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE-----Ds~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE-----DSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee-----cCCc
Confidence            4588889999999999999994 88999999999753   2333567889999999999999999999998     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      .|||.|+|++|+|..++.  +++.++++....+..||+.||.|||   +.+|||||||
T Consensus        93 VYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLK  145 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLK  145 (592)
T ss_pred             eEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccc
Confidence            899999999999999885  5568999999999999999999999   9999999998

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=3.7e-21  Score=200.91  Aligned_cols=123  Identities=29%  Similarity=0.525  Sum_probs=105.5

Q ss_pred             cccceeecccCcccEEeee-cCCC----CeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGL-LPDG----SEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~-l~~g----~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +...++||+|+||+||||. ++.|    .+||||.+... ..+...+|+.|..+|++++|+||++|+|+|..+      .
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------~  771 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------T  771 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------h
Confidence            3456889999999999998 4555    37899998753 345568999999999999999999999999753      3


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..||.+|||.|+|.+|++.. +..+.-...+.+..|||+||.|||   ..++|||||.+
T Consensus       772 ~qlvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaa  826 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAA  826 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhh
Confidence            68999999999999999763 456888899999999999999999   99999999964

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.83  E-value=1.6e-20  Score=182.34  Aligned_cols=123  Identities=33%  Similarity=0.439  Sum_probs=106.1

Q ss_pred             cceeecccCcccEEeeec-CCCCeeEEeeecC-CCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          295 RDNIIGRGGYGNVYKGLL-PDGSEVALKRFKN-CSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~-~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      ..+.||+|..|+|||+.+ ++++.+|+|.+.. .+....++..+|++++.+.+||+||+++|.+...    +.+..|+||
T Consensus        83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~----~~~isI~mE  158 (364)
T KOG0581|consen   83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN----GEEISICME  158 (364)
T ss_pred             hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC----CceEEeehh
Confidence            347899999999999996 4789999999953 3344457899999999999999999999999842    226899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||.+|||++.+...  +.+++...-+|+.+|.+||.|||+  ++.||||||||
T Consensus       159 YMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKP  207 (364)
T KOG0581|consen  159 YMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKP  207 (364)
T ss_pred             hcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCH
Confidence            99999999999543  469999999999999999999993  39999999998

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.83  E-value=2.6e-20  Score=178.74  Aligned_cols=126  Identities=24%  Similarity=0.400  Sum_probs=108.8

Q ss_pred             cCcccceeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|.+.    .+..||+|.++... ....+.|.+|+.++.+++|+||++++|++.     .++
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~   79 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RGN   79 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cCC
Confidence            45777899999999999999742    36789999998543 233467999999999999999999999987     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++... ...++|..++.++.|+++||+|||   +.+++||||||
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp  135 (266)
T cd05064          80 TMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAA  135 (266)
T ss_pred             CcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccH
Confidence            789999999999999999653 346899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.83  E-value=1.9e-20  Score=186.07  Aligned_cols=129  Identities=22%  Similarity=0.417  Sum_probs=107.6

Q ss_pred             hcCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||++..      .++..||||+++.... ...+.+.+|+.++.++ +|+|||+++|+|..   
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   82 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK---   82 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC---
Confidence            35677889999999999999963      2457899999975332 3346799999999999 89999999999863   


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCC------------------------------------------------------
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASN------------------------------------------------------  387 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~------------------------------------------------------  387 (425)
                       .++..++||||+++|+|.+++....                                                      
T Consensus        83 -~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          83 -PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             -CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence             3446799999999999999996421                                                      


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 ------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 ------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                            ...++|.....++.||++||+|||   +.+|+||||||
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp  202 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAA  202 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCcc
Confidence                  134889999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=6.2e-21  Score=175.35  Aligned_cols=128  Identities=24%  Similarity=0.391  Sum_probs=113.1

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|..++.||+|.||.||.|..+ ++-.||+|++.+..   .+-..++.+|+++-+.|+||||++++||+.     +..
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh-----d~~   95 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH-----DSK   95 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee-----ccc
Confidence            456888999999999999999854 57799999996532   233467899999999999999999999998     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..||++||.++|.+...|.+.....++....-.++.|+|.||.|+|   .++||||||||
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKp  152 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKP  152 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCH
Confidence            7899999999999999998766677899999999999999999999   99999999997

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=3.7e-20  Score=185.35  Aligned_cols=127  Identities=28%  Similarity=0.410  Sum_probs=106.3

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +.|...++||+|.||.|||++ ..+|+.||+|++....  .....-..+||.+|++|.||||++|.+.....   .....
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~si  193 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGSI  193 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCceE
Confidence            345666889999999999998 6789999999997433  22234557899999999999999999998853   24678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+|||+ -||.-.+.. ..-.++..+...++.|++.||+|+|   ..+|+|||||.
T Consensus       194 YlVFeYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~  246 (560)
T KOG0600|consen  194 YLVFEYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKG  246 (560)
T ss_pred             EEEEeccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccc
Confidence            99999998 488777743 3446999999999999999999999   99999999995

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.82  E-value=4.2e-20  Score=178.43  Aligned_cols=119  Identities=23%  Similarity=0.401  Sum_probs=101.4

Q ss_pred             eecccCcccEEeeecCC-------------------------CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccce
Q 048791          298 IIGRGGYGNVYKGLLPD-------------------------GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVAL  352 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l~~-------------------------g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l  352 (425)
                      .||+|+||.||+|.+..                         ...|++|.++........+|.+|++++++++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999997421                         13589999875444445678999999999999999999


Q ss_pred             eeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       353 ~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+|.     +....++||||+++|+|.+++... ...+++..++.++.||++||+|||   +.+|+||||||
T Consensus        82 ~~~~~-----~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp  145 (274)
T cd05076          82 HGVCV-----RGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCA  145 (274)
T ss_pred             EEEEE-----eCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCc
Confidence            99997     456789999999999999998643 346899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.82  E-value=9.1e-20  Score=176.96  Aligned_cols=125  Identities=22%  Similarity=0.324  Sum_probs=108.4

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||+|+||.||++.. .+|+.||||.+....   ......+.+|++++.+++|+||+++.+++.     +++..+
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-----~~~~~~   76 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-----TKDALC   76 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-----cCCeEE
Confidence            66778999999999999984 579999999986422   223456889999999999999999999886     556789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.......+++.....++.|++.||+|||   +.+|+||||||
T Consensus        77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp  130 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKP  130 (285)
T ss_pred             EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCH
Confidence            9999999999998887644456999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.82  E-value=5.4e-20  Score=176.23  Aligned_cols=123  Identities=33%  Similarity=0.537  Sum_probs=104.2

Q ss_pred             cceeecccCcccEEeeecC-----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          295 RDNIIGRGGYGNVYKGLLP-----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l~-----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ..+.||+|.||.||+|.+.     .+..|+||.++... ....++|.+|++.+++++|+||++++|+|.     ..+..+
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-----~~~~~~   77 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-----ENEPLF   77 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-----SSSSEE
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-----cccccc
Confidence            3578999999999999875     35689999997533 334679999999999999999999999998     455689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++|+|.++|.......++|.++..|+.|||+||+|||   +.+|+||||++
T Consensus        78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~  131 (259)
T PF07714_consen   78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSP  131 (259)
T ss_dssp             EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc---ccccccccccc
Confidence            9999999999999998875667999999999999999999999   78999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.82  E-value=1.2e-20  Score=192.42  Aligned_cols=124  Identities=31%  Similarity=0.522  Sum_probs=107.7

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .+.+.....||+|.||+||+|.+.  -.||||.++...  ....++|.+||.++++-||.||+-+.|||+.      ...
T Consensus       391 ~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~------p~~  462 (678)
T KOG0193|consen  391 PEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN------PPL  462 (678)
T ss_pred             HHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC------Cce
Confidence            344556788999999999999984  369999998543  3345799999999999999999999999973      334


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .||..++++.+|+.|||..+ .+++..+.+.||.|||+||.|||   .++|||||||.
T Consensus       463 AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKS  516 (678)
T KOG0193|consen  463 AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKS  516 (678)
T ss_pred             eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccc
Confidence            99999999999999998754 56999999999999999999999   99999999995

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.82  E-value=1e-19  Score=178.02  Aligned_cols=127  Identities=23%  Similarity=0.413  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeecC-----------------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-----------------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVAL  352 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-----------------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l  352 (425)
                      ++|...+.||+|+||.||++...                 ++..||||.+.... .....+|.+|++++.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            35677789999999999999743                 23479999987533 3335679999999999999999999


Q ss_pred             eeEEeeccccCCceEEEEEecCCCCCHHHHHhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 048791          353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN-----------------GPKLSWPLRQSIALGTARGLAYLHFGAQ  415 (425)
Q Consensus       353 ~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~-----------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~  415 (425)
                      ++++.     +.+..++||||+++|+|.+++....                 ...++|....+|+.||++||+|||   +
T Consensus        85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~  156 (304)
T cd05096          85 LGVCV-----DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---S  156 (304)
T ss_pred             EEEEe-----cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---H
Confidence            99997     4556899999999999999985421                 134789999999999999999999   8


Q ss_pred             CCeeecCCCC
Q 048791          416 PAIFHRDIKA  425 (425)
Q Consensus       416 ~~IiHRDLKp  425 (425)
                      .+|+||||||
T Consensus       157 ~~ivH~dlkp  166 (304)
T cd05096         157 LNFVHRDLAT  166 (304)
T ss_pred             CCccccCcch
Confidence            8999999997

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.2e-20  Score=203.47  Aligned_cols=127  Identities=31%  Similarity=0.559  Sum_probs=109.8

Q ss_pred             cCcccceeecccCcccEEeeecCC--CC----eeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD--GS----EVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~--g~----~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      .+....+.||+|.||.||+|.+.+  |.    .||||.++.. +.+...+|++|..+|++++|||||+++|.|.     .
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l-----~  766 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL-----D  766 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec-----C
Confidence            345567889999999999999643  43    4999999864 4556689999999999999999999999998     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASN-----GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~-----~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....+|++|||++|+|..||++.+     ...|+-...+.|+.|||+|+.||+   ++++|||||.+
T Consensus       767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAa  830 (1025)
T KOG1095|consen  767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAA  830 (1025)
T ss_pred             CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhh
Confidence            667899999999999999998742     345899999999999999999999   99999999974

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.82  E-value=6.6e-20  Score=185.59  Aligned_cols=127  Identities=23%  Similarity=0.395  Sum_probs=107.5

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||+++.      .++..||||+++... ....+.+.+|+.++..+ +|||||+++|+|.     
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~-----  109 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT-----  109 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec-----
Confidence            4577789999999999999862      346689999997433 23346789999999999 8999999999997     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC-------------------------------------------------------
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN-------------------------------------------------------  387 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~-------------------------------------------------------  387 (425)
                      +++..++||||+++|+|.+++....                                                       
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            5667899999999999999986421                                                       


Q ss_pred             ------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 ------------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 ------------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                                        ...++|..+.+++.||++||+|||   +.+|+||||||
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp  242 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAA  242 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCch
Confidence                              124899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.81  E-value=6.6e-20  Score=170.89  Aligned_cols=124  Identities=29%  Similarity=0.402  Sum_probs=107.0

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCcc-c-hHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAA-G-DATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~-~-~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .|...+.||||.||.||+|. ..+|+.||||+++..... + .....+||..|++++|+||+.|+..+-     .....-
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~-----~~~~l~   77 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP-----HKSNLS   77 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc-----CCCceE
Confidence            45566889999999999998 568999999999854322 2 357789999999999999999999987     455678


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+|||+ .+|+..++++ ...|+..+...++.++.+|++|+|   ...|+||||||
T Consensus        78 lVfEfm~-tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKP  129 (318)
T KOG0659|consen   78 LVFEFMP-TDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKP  129 (318)
T ss_pred             EEEEecc-ccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCc
Confidence            9999998 6999988764 356999999999999999999999   99999999998

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.2e-19  Score=182.11  Aligned_cols=125  Identities=19%  Similarity=0.282  Sum_probs=108.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++. .+|+.||||+++...   ......+.+|++++..++|+||+++++++.     +++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-----DENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-----cCCe
Confidence            3688889999999999999985 468999999996421   223456788999999999999999999987     5668


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp  129 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKP  129 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCH
Confidence            89999999999999999653  36899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.8e-19  Score=182.04  Aligned_cols=125  Identities=20%  Similarity=0.270  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++. ..+|+.||||.+....   ....+.+.+|++++.+++|+|||++++++.     +.+.
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-----DAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----cCCe
Confidence            367788999999999999997 4578999999986421   223457889999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp  129 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKP  129 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            89999999999999999643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=1.5e-19  Score=176.75  Aligned_cols=129  Identities=28%  Similarity=0.464  Sum_probs=109.9

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ..++...+.||+|.||.||++... +|...|||.+...+....+.+.+|+.+|.+++|+|||+.+|......   .....
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---~~~~~   92 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE---NDEYN   92 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc---CeeeE
Confidence            345677799999999999999954 48999999987543322567899999999999999999999854321   13689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.|||+++|+|.+++.+... .|+....+.+..||++||+|||   +++||||||||
T Consensus        93 i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~  145 (313)
T KOG0198|consen   93 IFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKP  145 (313)
T ss_pred             eeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCccc
Confidence            99999999999999976554 7999999999999999999999   99999999996

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.81  E-value=1.9e-19  Score=182.47  Aligned_cols=124  Identities=19%  Similarity=0.239  Sum_probs=108.0

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +|...+.||+|+||+||++. ..+++.||||++....   ......+.+|++++.+++|+|||++++++.     +++..
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence            57778999999999999998 4578999999996432   223457899999999999999999999987     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...  ..+++.....++.||+.||+|||   ..+|+||||||
T Consensus        77 ~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp  129 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKP  129 (381)
T ss_pred             EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcH
Confidence            9999999999999999643  45899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.81  E-value=2.1e-19  Score=171.30  Aligned_cols=126  Identities=25%  Similarity=0.451  Sum_probs=111.3

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||+|...+++.||+|.+.... ...+.|.+|+.++++++|+||+++++++.     .++..+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv   79 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT-----KEEPIYII   79 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCCCcEEE
Confidence            4577789999999999999998888899999986532 23568999999999999999999999886     45668999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++.......+++..+..++.|+++||+|||   +.+++||||||
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p  131 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRA  131 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccch
Confidence            99999999999997655567999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=2.9e-19  Score=173.38  Aligned_cols=126  Identities=24%  Similarity=0.344  Sum_probs=108.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +|...++||+|+||.||++.. .+++.||||.+....   ......+.+|++++++++|+||+++.+++.     .++..
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-----CCCeE
Confidence            366778999999999999984 578999999986432   122356788999999999999999999886     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++.......+++.....++.|+++||.|||   +.+|+||||||
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  130 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKP  130 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCH
Confidence            99999999999999987655556999999999999999999999   88999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.80  E-value=2.9e-19  Score=169.93  Aligned_cols=124  Identities=27%  Similarity=0.446  Sum_probs=108.7

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +|...+.||+|+||.||++...++..+|+|.++... ...++|.+|++++++++|+||+++++++.     +....++||
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~iv~   78 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYIVT   78 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEEEE
Confidence            466678899999999999998888899999986432 33467999999999999999999999986     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++.... ..++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  128 (256)
T cd05114          79 EFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAA  128 (256)
T ss_pred             EcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCc
Confidence            9999999999986533 35899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=3.5e-19  Score=172.06  Aligned_cols=128  Identities=25%  Similarity=0.416  Sum_probs=109.9

Q ss_pred             cCcccceeecccCcccEEeeec-----CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .+|...+.||+|+||.||++..     .++..||||+++.......+.|.+|++++.+++|+||+++.+++...   +..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~   80 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR   80 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCC
Confidence            3566778999999999999974     35789999999765555567899999999999999999999987632   344


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|+||+++|+|.+++... ...++|..+..++.|+++||+|||   ..+|+||||||
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp  136 (284)
T cd05081          81 NLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLAT  136 (284)
T ss_pred             ceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCH
Confidence            679999999999999999653 345999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.80  E-value=3.4e-19  Score=170.64  Aligned_cols=132  Identities=23%  Similarity=0.269  Sum_probs=114.4

Q ss_pred             HHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      |++.+++++.....||+|+||.||+|.. +++..||+|.+........+.+.+|++++++++|+||+++++++.     .
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~   76 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----E   76 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----c
Confidence            3456778888889999999999999984 467889999987655555678999999999999999999999987     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKL--SWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L--~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++..++|+||+++++|.+++.... ..+  ++..+..++.||++||+|||   +.+|+||||||
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p  136 (268)
T cd06624          77 NGFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKG  136 (268)
T ss_pred             CCEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCH
Confidence            667899999999999999997532 234  88899999999999999999   89999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.8e-19  Score=175.57  Aligned_cols=124  Identities=21%  Similarity=0.210  Sum_probs=107.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +|...+.||+|+||.||++.. .+|+.||||.+....   ....+.+.+|++++.+++||||+++++++.     +++..
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~   76 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH-----DQRFL   76 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc-----cCCeE
Confidence            577789999999999999985 468999999986422   223456889999999999999999998876     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        77 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  129 (291)
T cd05612          77 YMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKP  129 (291)
T ss_pred             EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCH
Confidence            9999999999999999643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.80  E-value=1.1e-19  Score=192.50  Aligned_cols=134  Identities=22%  Similarity=0.345  Sum_probs=114.4

Q ss_pred             cCcccceeecccCcccEEeeecCCC-CeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceee-EEeeccccC-Cce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDG-SEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRG-YCIATTQLE-GHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g-~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g-~~~~~~~~~-~~~  366 (425)
                      .+....+.|-+|||+.||.+....+ ..+|+|++-..+....+...+||++|++|+ |+|||.+++ ....+.... ..+
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            4466779999999999999997665 999999997667777888999999999998 999999999 433332222 468


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+|.||||++|+|-|++..+....|++...++|+.|+++|+++|| .++++|||||||.
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH-~~~pPiIHRDLKi  174 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH-YLKPPIIHRDLKI  174 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh-cCCCccchhhhhh
Confidence            899999999999999998655556999999999999999999999 5789999999994

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.80  E-value=1.7e-19  Score=171.80  Aligned_cols=128  Identities=30%  Similarity=0.515  Sum_probs=114.1

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ..+|...+.||+|+||.||+|...++..+|+|.++.........+.+|++++.+++|+||+++++++.     +.+..++
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l   79 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEPVYI   79 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCCeEE
Confidence            34577778999999999999998779999999998655545668999999999999999999999987     5567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++.+.....++|.++..++.++++||.|||   +.+|+||||||
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~  132 (261)
T cd05148          80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAA  132 (261)
T ss_pred             EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCc
Confidence            999999999999998755567999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.80  E-value=3.1e-19  Score=175.73  Aligned_cols=125  Identities=27%  Similarity=0.536  Sum_probs=106.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCC----eeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGS----EVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~----~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .+|...+.||+|+||.||+|+. .+|.    .||||.++... ....++|.+|+.+++.++|+||++++|+|..      
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------   80 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------   80 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence            3588889999999999999984 3344    38999987533 3345689999999999999999999999963      


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++|+||+++|+|.+++... ...+++...+.++.||++||+|||   +.+|+||||||
T Consensus        81 ~~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp  137 (316)
T cd05108          81 STVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAA  137 (316)
T ss_pred             CCceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccch
Confidence            3468999999999999999753 345899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=5.2e-19  Score=168.75  Aligned_cols=127  Identities=30%  Similarity=0.486  Sum_probs=112.0

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||+|...+++.||||.++... ...++|.+|++++++++|+||+++++++.     ..+..++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCeee
Confidence            35578889999999999999998778899999987533 33567999999999999999999999986     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+++.......++|..+.+++.+++.||.|||   +.+|+||||||
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  131 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAA  131 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCc
Confidence            999999999999997654456999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.80  E-value=3.5e-19  Score=179.17  Aligned_cols=125  Identities=19%  Similarity=0.285  Sum_probs=108.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||+||++.. .+++.||||.++...   ......+.+|++++.+++|+||+++++.+.     ++..
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~-----~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ-----DKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cCCe
Confidence            3678889999999999999984 568999999996422   222356788999999999999999999887     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp  129 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKP  129 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCH
Confidence            89999999999999999643  46999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=3.5e-20  Score=184.41  Aligned_cols=125  Identities=23%  Similarity=0.347  Sum_probs=107.6

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchH-HHHHHHHHHhhCC-CCcccceeeEEeeccccCCc-e
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA-TFKHEVEVIASVR-HVNLVALRGYCIATTQLEGH-Q  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~-~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~-~  366 (425)
                      ++|...+.||.|.||.||+|+ ..+|..||||+|+......++ .=++|+.-|++|. |+|||+|.....+     .+ .
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d-----~~~~   84 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD-----NDRI   84 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc-----cCce
Confidence            456677889999999999998 678999999999864433222 2367999999998 9999999999873     33 7


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|||||. -+|.+.+.++ ++.++......|+.||.+||+|+|   +.++.|||+||
T Consensus        85 L~fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKP  138 (538)
T KOG0661|consen   85 LYFVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKP  138 (538)
T ss_pred             EeeeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCh
Confidence            899999997 6999988775 677999999999999999999999   99999999998

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.79  E-value=4.5e-19  Score=181.22  Aligned_cols=128  Identities=23%  Similarity=0.379  Sum_probs=107.3

Q ss_pred             hcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCC-CCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSA-AGDATFKHEVEVIASVR-HVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||+|+..      .+..||||+++.... ...+.|.+|++++++++ |||||+++|+|.    
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~----  111 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT----  111 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc----
Confidence            456778899999999999999742      234799999975332 33467999999999996 999999999997    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCC------------------------------------------------------
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASN------------------------------------------------------  387 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~------------------------------------------------------  387 (425)
                       +.+..+|||||+++|+|.++|+...                                                      
T Consensus       112 -~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (400)
T cd05105         112 -KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP  190 (400)
T ss_pred             -cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence             5667899999999999999986421                                                      


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 ----------------------------------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 ----------------------------------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                                                              ...++|..+..++.||++||+|||   ..+|+||||||
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp  265 (400)
T cd05105         191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAA  265 (400)
T ss_pred             hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCh
Confidence                                                    124889999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=4.6e-19  Score=175.96  Aligned_cols=125  Identities=22%  Similarity=0.265  Sum_probs=108.6

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++... +|+.||||+++...   ....+.+.+|++++.+++|+||+++++++.     +++.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-----DDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-----cCCE
Confidence            35788899999999999999854 68999999997432   223457889999999999999999999887     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  129 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKP  129 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence            89999999999999999543  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PHA02988 hypothetical protein; Provisional

Probab=99.79  E-value=7.5e-19  Score=170.82  Aligned_cols=135  Identities=17%  Similarity=0.297  Sum_probs=109.3

Q ss_pred             ccccHHHHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccc---hHHHHHHHHHHhhCCCCcccceeeE
Q 048791          279 VRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAG---DATFKHEVEVIASVRHVNLVALRGY  355 (425)
Q Consensus       279 ~~f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~---~~~f~~Ev~il~~l~H~NIV~l~g~  355 (425)
                      ..++.+++.     ......||+|++|.||+|.+ +|+.||||+++......   .+.|.+|+++|.+++|+|||+++|+
T Consensus        13 ~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~   86 (283)
T PHA02988         13 KCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF   86 (283)
T ss_pred             eecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence            344556652     23336799999999999998 68999999997543322   3678899999999999999999999


Q ss_pred             EeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      +..... +....++||||+++|+|.+++...  ..++|....+++.++++||+|||   . .+++||||||
T Consensus        87 ~~~~~~-~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp  151 (283)
T PHA02988         87 IIDIVD-DLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTS  151 (283)
T ss_pred             EEeccc-CCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCCh
Confidence            874111 234678999999999999999653  46999999999999999999999   5 4788999997

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.79  E-value=7.3e-19  Score=168.16  Aligned_cols=126  Identities=27%  Similarity=0.458  Sum_probs=108.7

Q ss_pred             cCcccceeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|...    +...||||.++... .....+|.+|+.++.+++|+||+++.+++.     +++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----KSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----cCC
Confidence            46788899999999999999863    24579999987533 333467999999999999999999999986     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++.... ..++|..+..++.|++.||+|||   +.+|+||||||
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p  134 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAA  134 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCc
Confidence            7899999999999999996533 46999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.79  E-value=7.4e-19  Score=167.57  Aligned_cols=125  Identities=27%  Similarity=0.447  Sum_probs=109.9

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...++||+|+||.||++...+++.||+|.+.... ...+.|.+|++++++++|+|+++++++..      .+..+++
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~v   78 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPIYII   78 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCcEEE
Confidence            4567778999999999999998889999999987533 23468999999999999999999998763      3457999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++.......++|.++..++.|++.||+|||   +.+++||||||
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p  130 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRA  130 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccH
Confidence            99999999999997655567999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.79  E-value=5.7e-19  Score=174.79  Aligned_cols=119  Identities=24%  Similarity=0.267  Sum_probs=103.1

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      +.||+|+||.||++.. .+|+.||||.++...   ......+.+|++++.+++|+||+++.+++.     .++..++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ-----THDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-----cCCEEEEEEe
Confidence            4699999999999984 578999999997422   223356789999999999999999999887     5667899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp  123 (323)
T cd05571          76 YANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKL  123 (323)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCH
Confidence            99999999998643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.79  E-value=3.3e-19  Score=180.47  Aligned_cols=127  Identities=21%  Similarity=0.373  Sum_probs=106.7

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||++..      .++..||||+++.... ...+.+.+|+++++++ +|+|||+++|+|.     
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~-----  112 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT-----  112 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec-----
Confidence            4677889999999999999862      2346899999975332 2345788999999999 8999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC-------------------------------------------------------
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN-------------------------------------------------------  387 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~-------------------------------------------------------  387 (425)
                      +.+..++||||+++|+|.++++...                                                       
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            5667899999999999999985421                                                       


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 -------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 -------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                                   ...++|....+|+.||++||+|||   +.+|+||||||
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp  240 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAA  240 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCch
Confidence                         124889999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.79  E-value=5.8e-19  Score=178.27  Aligned_cols=124  Identities=20%  Similarity=0.236  Sum_probs=107.4

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +|...+.||+|+||.||+++. .+++.||||.+....   ......+.+|++++.+++|+||+++++.+.     +++..
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~~   76 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL   76 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE-----cCCEE
Confidence            577889999999999999984 568999999986422   122456889999999999999999999887     56788


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus        77 ~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp  129 (376)
T cd05598          77 YFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKP  129 (376)
T ss_pred             EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCH
Confidence            9999999999999999643  46888998999999999999999   89999999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.79  E-value=5.5e-19  Score=175.00  Aligned_cols=119  Identities=23%  Similarity=0.277  Sum_probs=102.8

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      +.||+|+||.||++.. .+|+.||+|.++..   .......+.+|++++.+++||||+++.+++.     ..+..++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~-----~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCEEEEEEe
Confidence            4699999999999984 57899999999742   1223456788999999999999999999887     4567899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp  123 (323)
T cd05595          76 YANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKL  123 (323)
T ss_pred             CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCH
Confidence            99999999888543  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.79  E-value=7.4e-19  Score=168.03  Aligned_cols=125  Identities=27%  Similarity=0.455  Sum_probs=109.8

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      +|...+.||+|+||.||++... +++.||+|.++.. .....++.+|++++.+++|+||+++++++.     .....++|
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv   80 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFYII   80 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCcEEE
Confidence            4677789999999999999854 5889999998753 333567999999999999999999999987     45567999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++++|.+++.......++|..++.++.|+++||+|||   +.+|+||||||
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp  132 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAA  132 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCc
Confidence            99999999999997655567999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.79  E-value=5e-19  Score=179.18  Aligned_cols=124  Identities=19%  Similarity=0.223  Sum_probs=107.5

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +|...+.||+|+||.||+++. .+++.||||.+....   ......+.+|++++++++|+|||++++.+.     +++..
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence            477889999999999999984 578899999986422   223457889999999999999999999987     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        77 ~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp  129 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKP  129 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            9999999999999998643  45889999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.79  E-value=5.7e-19  Score=175.30  Aligned_cols=125  Identities=18%  Similarity=0.293  Sum_probs=108.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||.++...   ....+.+.+|+.++.+++|+||+++++++.     +++.
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~   92 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-----DENR   92 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----cCCE
Confidence            4677889999999999999985 468999999986421   223457889999999999999999999987     5668


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp  146 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKP  146 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCH
Confidence            89999999999999999653  46889999999999999999999   89999999997

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.79  E-value=7.3e-19  Score=174.57  Aligned_cols=119  Identities=24%  Similarity=0.283  Sum_probs=103.3

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      +.||+|+||.||++.. .+|+.||||.++..   .......+.+|++++++++|+||+++.+++.     ..+..++|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ-----TKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-----cCCEEEEEEe
Confidence            4699999999999984 57899999999743   2233467889999999999999999999886     5667899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 y~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp  123 (328)
T cd05593          76 YVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKL  123 (328)
T ss_pred             CCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCH
Confidence            99999999988543  46999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.79  E-value=6e-19  Score=169.14  Aligned_cols=120  Identities=23%  Similarity=0.384  Sum_probs=101.7

Q ss_pred             eeecccCcccEEeeecCC-------------CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          297 NIIGRGGYGNVYKGLLPD-------------GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~-------------g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      +.||+|+||.||+|.+.+             ...|++|.+..........|..|+.+++.++||||+++++++.     .
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----R   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c
Confidence            358999999999998532             2258999886544444567889999999999999999999997     4


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....++||||+++|+|..++... ...+++..+.+++.||++||+|||   +.+|+||||||
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp  133 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCT  133 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCc
Confidence            45679999999999999988643 345999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.79  E-value=8e-19  Score=167.43  Aligned_cols=124  Identities=27%  Similarity=0.417  Sum_probs=108.0

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +|...+.||+|+||.||++...++..||||.++... ...++|.+|+.++.+++|+||+++++++.     +....++||
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~   78 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT-----KQRPIYIVT   78 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEc-----cCCCcEEEE
Confidence            456678899999999999998777789999987533 33567999999999999999999999986     455679999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++.... ..++|..++.++.||+.||+|||   +.+|+||||||
T Consensus        79 e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  128 (256)
T cd05113          79 EYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAA  128 (256)
T ss_pred             EcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCc
Confidence            9999999999996533 36899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.79  E-value=4e-19  Score=172.47  Aligned_cols=126  Identities=23%  Similarity=0.328  Sum_probs=109.7

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...++||+|+||+||..+ -++++.+|+|.+++..   ....+...+|..+|.+++||.||+++--+.     .++
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ-----t~~   98 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ-----TEE   98 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc-----cCC
Confidence            4568889999999999999997 4679999999997643   233456788999999999999999987776     567


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..|||+||++||.|..+|.+  ...++.....-++.+|+.||.|||   +.+||||||||
T Consensus        99 kLylVld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKP  153 (357)
T KOG0598|consen   99 KLYLVLDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKP  153 (357)
T ss_pred             eEEEEEeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCH
Confidence            78999999999999999954  356899988889999999999999   99999999998

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.79  E-value=9.2e-20  Score=176.71  Aligned_cols=126  Identities=26%  Similarity=0.404  Sum_probs=101.2

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      .|...+++|.|+||.||+|++ .+++.||||+.......    --+|+++|++++|||||+|.-++......+.-..-||
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            456679999999999999995 45789999998653321    1359999999999999999998876543222244589


Q ss_pred             EecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||| -+|.++++.  ..+..++.....-+..||.+||+|||   ..+|+||||||
T Consensus       101 leymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKP  153 (364)
T KOG0658|consen  101 LEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKP  153 (364)
T ss_pred             HHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCCh
Confidence            99999 588888864  23456777778889999999999999   89999999998

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.79  E-value=1.2e-18  Score=169.12  Aligned_cols=125  Identities=22%  Similarity=0.327  Sum_probs=107.6

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||+|+||+||++.. .+++.||+|.+....   ......+.+|++++.+++|+|++++.+++.     .++..+
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~   76 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-----TKDALC   76 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-----cCCEEE
Confidence            55668899999999999985 578999999986432   122345788999999999999999998886     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.......++|.....++.|+++||.|||   +.+|+||||||
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp  130 (285)
T cd05632          77 LVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKP  130 (285)
T ss_pred             EEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCH
Confidence            9999999999999987655557999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.79  E-value=1e-18  Score=172.99  Aligned_cols=128  Identities=23%  Similarity=0.444  Sum_probs=106.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||+|.. .+|+.||||+++...  ......+.+|++++++++|+||+++.+++......+....+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            366779999999999999984 578999999987422  22345788999999999999999999998654332334679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ ++|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        81 lv~e~~~-~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp  131 (338)
T cd07859          81 VVFELME-SDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKP  131 (338)
T ss_pred             EEEecCC-CCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            9999996 789988854  345999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=7.5e-19  Score=172.99  Aligned_cols=117  Identities=21%  Similarity=0.267  Sum_probs=102.1

Q ss_pred             ecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||.||++.. .+++.||+|.++..   .......+.+|++++.+++|+||+++.+++.     +.+..++||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-----SPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----cCCeEEEEEcCC
Confidence            69999999999985 46889999998642   2333467889999999999999999999886     566789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        76 ~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp  121 (312)
T cd05585          76 NGGELFHHLQRE--GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKP  121 (312)
T ss_pred             CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCH
Confidence            999999999643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.79  E-value=6.4e-19  Score=175.94  Aligned_cols=128  Identities=22%  Similarity=0.399  Sum_probs=106.9

Q ss_pred             cCcccceeecccCcccEEeee------cCCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL------LPDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~------l~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||+|.      ..+++.||||+++... ......+.+|++++.++ +|+||+++++++..    
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~----   82 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK----   82 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec----
Confidence            457788999999999999996      2357899999997533 23345788999999999 68999999998864    


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC-------------------------------------------------------
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN-------------------------------------------------------  387 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~-------------------------------------------------------  387 (425)
                      .+...++||||+++|+|.+++....                                                       
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE  162 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence            3456799999999999999986421                                                       


Q ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 ----------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 ----------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                                ...++|.++..++.||++||+|||   +.+|+||||||
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp  207 (343)
T cd05103         163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAA  207 (343)
T ss_pred             hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCcc
Confidence                      124789999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=1.2e-18  Score=165.69  Aligned_cols=125  Identities=31%  Similarity=0.528  Sum_probs=110.9

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||++... |+.||||.++.... ..+++.+|+.++.+++|+||+++++++.     ..+..++|
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v   78 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLYIV   78 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeEEE
Confidence            45677799999999999999864 78999999976443 4578999999999999999999999986     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++++|.+++.......++|..+..++.|++.||.|||   ..+|+||||||
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p  130 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAA  130 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhccc
Confidence            99999999999997655457999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.78  E-value=9.3e-19  Score=173.32  Aligned_cols=122  Identities=25%  Similarity=0.312  Sum_probs=104.5

Q ss_pred             ceeeccc--CcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          296 DNIIGRG--GYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       296 ~~~IG~G--~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      .++||+|  +|++||++.. .+|+.||||+++...  ....+.+.+|+++++.++|+||+++++++.     .++..++|
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~lv   77 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWVV   77 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEEE
Confidence            4679999  7889999985 578999999997432  223356778999999999999999999997     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||+++|+|.+++.......+++..+..++.|+++||+|||   +.+||||||||
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp  129 (327)
T cd08227          78 TSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKA  129 (327)
T ss_pred             EeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCh
Confidence            99999999999996544456999999999999999999999   89999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.78  E-value=1.1e-18  Score=166.32  Aligned_cols=124  Identities=27%  Similarity=0.462  Sum_probs=108.5

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +|...+.||+|+||.||++...++..||+|.++.... ..+.|.+|++++++++|+|++++++++.      ....+++|
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~lv~   79 (260)
T cd05070           7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIYIVT   79 (260)
T ss_pred             HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcEEEE
Confidence            4666788999999999999988888999999975333 3467999999999999999999998863      34579999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++|.+++.......++|..+..++.+++.||+|||   +.+|+||||||
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p  130 (260)
T cd05070          80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRS  130 (260)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCcc
Confidence            9999999999997655556999999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.78  E-value=1.2e-18  Score=168.43  Aligned_cols=127  Identities=24%  Similarity=0.402  Sum_probs=107.3

Q ss_pred             cCcccceeecccCcccEEeeec-----CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||.||+|..     .++..||+|.++... .....+|.+|++++++++|+||+++++++.     .+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence            3466678999999999999973     356789999997533 333467899999999999999999999986     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASN---------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~---------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++....               ...++|.+.+.++.|+++||+|||   +.+|+||||||
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp  152 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAA  152 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhcccc
Confidence            67899999999999999985321               235899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.78  E-value=7.9e-19  Score=175.43  Aligned_cols=125  Identities=20%  Similarity=0.266  Sum_probs=107.3

Q ss_pred             cCcccceeecccCcccEEeeecCC--CCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD--GSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~--g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||++...+  +..||+|++...   .....+.+.+|++++..++|||||++++++.     +++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~  104 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-----DES  104 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-----eCC
Confidence            457888999999999999998532  368999998632   1223457889999999999999999999987     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus       105 ~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp  159 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKP  159 (340)
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCH
Confidence            789999999999999999643  46899999999999999999999   89999999997

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.78  E-value=1.2e-18  Score=166.79  Aligned_cols=125  Identities=29%  Similarity=0.458  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||+|...+...||+|+++... ...++|.+|++++.+++|+||+++.++..      ....++|
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~lv   78 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYIV   78 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcEEE
Confidence            3477788999999999999997777789999997533 23467999999999999999999998763      3457999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++.......++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p  130 (262)
T cd05071          79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA  130 (262)
T ss_pred             EEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCc
Confidence            99999999999997644456899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.78  E-value=2.4e-19  Score=185.80  Aligned_cols=130  Identities=26%  Similarity=0.369  Sum_probs=109.2

Q ss_pred             cccceeecccCcccEEeee-cCCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeecc-ccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATT-QLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~-~~~~~~~~L  369 (425)
                      |...+.||+|+||.||+|+ -.+|+.||||.++... ....+...+|+++|++++|+|||++.+.-.+.. ..-.....+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            4455789999999999999 5679999999998643 344567899999999999999999988754321 011456799


Q ss_pred             EEecCCCCCHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFA-SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~-~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||||++|||...|.+ .+...|+....+.+..+++.||.|||   +.+||||||||
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP  148 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKP  148 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCC
Confidence            9999999999999976 34456999999999999999999999   99999999998

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=9.1e-19  Score=174.49  Aligned_cols=125  Identities=21%  Similarity=0.281  Sum_probs=109.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||+++...   ......+..|++++..++|+||+++++++.     +++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ-----DEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee-----cCCe
Confidence            3678889999999999999985 478999999997422   233467889999999999999999999886     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||++||+|||   ..+|+||||||
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp  129 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKP  129 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            89999999999999999654  56999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.78  E-value=8.5e-19  Score=177.24  Aligned_cols=128  Identities=18%  Similarity=0.235  Sum_probs=109.3

Q ss_pred             HHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      ....++|...+.||+|+||.||++.. .+++.||+|.++..   .......+.+|+++++.++||||+++++++.     
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-----  113 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-----  113 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-----
Confidence            33456788889999999999999985 46889999998632   2223456889999999999999999999886     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++..++||||+++|+|.+++..   ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus       114 ~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp  170 (370)
T cd05621         114 DDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKP  170 (370)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCH
Confidence            56678999999999999999854   24889999999999999999999   89999999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.78  E-value=6.5e-19  Score=177.98  Aligned_cols=126  Identities=19%  Similarity=0.256  Sum_probs=107.7

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ..++|...+.||+|+||.||+++. .+++.||+|.++..   .......+.+|+++++.++|+||+++++++.     ++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-----~~  115 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-----DD  115 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence            355788889999999999999985 46889999998642   1223345788999999999999999999886     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++...   .++......++.|+++||+|||   +.+|+||||||
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp  170 (370)
T cd05596         116 KYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKP  170 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            6789999999999999998542   4788888899999999999999   89999999997

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.7e-18  Score=172.09  Aligned_cols=126  Identities=22%  Similarity=0.281  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+++.||||.+...   .....+.|.+|+.++..++|+||+++++++.     +++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-----DENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-----cCCe
Confidence            3577889999999999999985 46899999998642   1223456889999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++... ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  130 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKP  130 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCH
Confidence            89999999999999999642 345899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.78  E-value=1.8e-18  Score=168.08  Aligned_cols=125  Identities=25%  Similarity=0.381  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.++++++|+||+++++++.     .++..+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~   79 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-----TERCLT   79 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-----CCCeEE
Confidence            4577789999999999999984 468999999987432 223457889999999999999999999986     455789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ |+|.+++... ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        80 lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp  131 (288)
T cd07871          80 LVFEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKP  131 (288)
T ss_pred             EEEeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            9999998 5999988643 345899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.78  E-value=1.1e-18  Score=165.50  Aligned_cols=118  Identities=25%  Similarity=0.433  Sum_probs=100.5

Q ss_pred             eeecccCcccEEeeecCCCC-----------eeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          297 NIIGRGGYGNVYKGLLPDGS-----------EVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~-----------~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +.||+|+||.||+|...+..           .|++|.+...... ...|.+|+.++++++|+||++++|++..      .
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~   73 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D   73 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence            36899999999999965422           5788877643332 5789999999999999999999999873      4


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|+||+++|+|.+++.... ..+++..+..++.||+.||+|||   +.+|+||||||
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp  129 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCG  129 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCcc
Confidence            5699999999999999997543 26899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.78  E-value=1.9e-18  Score=164.48  Aligned_cols=127  Identities=31%  Similarity=0.517  Sum_probs=112.2

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||++...+++.||||.+.... ...+++.+|++++++++|+||+++++++.     .+...++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~   78 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCS-----EEEPIYI   78 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeee-----cCCceEE
Confidence            35678889999999999999998778899999987533 33467999999999999999999999986     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+++.......++|..+..++.+++.||.|||   +.+|+||||||
T Consensus        79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p  131 (261)
T cd05034          79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAA  131 (261)
T ss_pred             EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcch
Confidence            999999999999997755567999999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.78  E-value=1.6e-19  Score=183.92  Aligned_cols=131  Identities=26%  Similarity=0.439  Sum_probs=114.0

Q ss_pred             HHHHhcCcccceeecccCcccEEeeecCC-CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          286 IKKATRNFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       286 i~~at~~f~~~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .+....+....++||-|.||.||.|.+.. .-.||||.++. +....++|+.|..+|+.++|||+|+|+|.|.     .+
T Consensus       262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT-----~E  335 (1157)
T KOG4278|consen  262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----HE  335 (1157)
T ss_pred             hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhc-----cC
Confidence            33334456677999999999999999754 56899999986 3445689999999999999999999999998     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...|||.|||.+|+|.+||++-++..++--..+.+|.||+.||+||.   ..++|||||.+
T Consensus       336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAA  393 (1157)
T KOG4278|consen  336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAA  393 (1157)
T ss_pred             CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---Hhhhhhhhhhh
Confidence            67799999999999999999877777888889999999999999999   99999999964

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.78  E-value=5.2e-19  Score=169.45  Aligned_cols=127  Identities=27%  Similarity=0.354  Sum_probs=105.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccch-HHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGD-ATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~-~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.|++|.||.||+|+. .+++.||+|+++-.. ..+. -.-++||.+|.+++|||||.+.......   .-+..
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~d~i  152 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NMDKI  152 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---cccee
Confidence            4566678999999999999984 578999999998533 2221 3458999999999999999998887743   34568


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||||||+ .+|...+..- +.++...+...++.|+.+|++|||   ...|+|||||+
T Consensus       153 y~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~  205 (419)
T KOG0663|consen  153 YIVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKT  205 (419)
T ss_pred             eeeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHh---hceeEecccch
Confidence            99999998 5898888653 356889999999999999999999   99999999996

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.78  E-value=1.9e-18  Score=165.14  Aligned_cols=125  Identities=28%  Similarity=0.380  Sum_probs=109.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||+|+. .+|+.||+|++..........+.+|+.++.+++|+||+++++++.     .++..++
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~i   83 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLWI   83 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEEE
Confidence            4577788999999999999984 678999999997544444567889999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+++++|.+++...  ..+++..+..++.|+++||.|||   +.+|+||||||
T Consensus        84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  134 (267)
T cd06646          84 CMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKG  134 (267)
T ss_pred             EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence            99999999999998643  46899999999999999999999   88999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.78  E-value=1.9e-18  Score=171.02  Aligned_cols=119  Identities=24%  Similarity=0.273  Sum_probs=102.2

Q ss_pred             eeecccCcccEEeee-cCCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          297 NIIGRGGYGNVYKGL-LPDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      +.||+|+||.||++. ..+|+.||+|.++..   .......+.+|++++..++|+||+++.+++.     ..+..++|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~-----~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEE-----cCCEEEEEEe
Confidence            369999999999998 457899999999742   1223456788999999999999999999886     5567899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      |+++|+|.+++...  ..+++.....++.||++||+|||   + .+|+||||||
T Consensus        76 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp  124 (325)
T cd05594          76 YANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKL  124 (325)
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCC
Confidence            99999999988543  46899999999999999999999   6 7999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.78  E-value=1.6e-18  Score=171.81  Aligned_cols=126  Identities=19%  Similarity=0.249  Sum_probs=109.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||+++...   ....+.+..|+.++..++|+||+++.+++.     +.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-----~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ-----DKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCe
Confidence            4678889999999999999984 478999999997432   223456889999999999999999999886     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++... ...+++.....++.||++||.|||   +.+|+||||||
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp  130 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKP  130 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCch
Confidence            89999999999999999653 246999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.78  E-value=2e-18  Score=171.49  Aligned_cols=126  Identities=21%  Similarity=0.245  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++. .+++.||+|.+...   .......+.+|+.++..++|+||+++.+++.     +++.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~-----~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ-----DENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cCCE
Confidence            4678889999999999999985 46889999998642   1222346888999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++... ...+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp  130 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKP  130 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCch
Confidence            89999999999999999653 246899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.78  E-value=1.8e-18  Score=167.88  Aligned_cols=127  Identities=29%  Similarity=0.498  Sum_probs=109.4

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||+||++..      .++..+|+|.+........+.|.+|++++.+++|+||+++++++.     .+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence            4577789999999999999973      235679999997655555678999999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASN-----------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~-----------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++++|.+++....           ...++|..+..++.|++.||+|||   +.+|+||||||
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp  148 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLAT  148 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCc
Confidence            67899999999999999996421           235999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.78  E-value=1.6e-18  Score=166.46  Aligned_cols=127  Identities=24%  Similarity=0.416  Sum_probs=108.1

Q ss_pred             cCcccceeecccCcccEEeeecC------CCCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|.....||+|+||.||++...      +.+.|++|.+...... ..++|.+|++++++++|+||+++++++.     +
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-----E   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-----C
Confidence            45777889999999999999843      3467999988654333 3468999999999999999999999986     4


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASN-------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~-------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..++||||+++|+|.+++....       ...++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp  145 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAA  145 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCcc
Confidence            566799999999999999997543       125899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.78  E-value=1.6e-18  Score=165.03  Aligned_cols=124  Identities=26%  Similarity=0.410  Sum_probs=107.7

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +|...+.||+|+||.||++...++..+|+|.+.... ....+|.+|++++.+++|+||+++++++.     +.+..++|+
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~lv~   78 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFIVT   78 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEEEE
Confidence            356678899999999999998777789999986432 23457899999999999999999999986     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++|.+++.... ..++|.....|+.|+++||+|||   +.+|+||||||
T Consensus        79 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p  128 (256)
T cd05059          79 EYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAA  128 (256)
T ss_pred             ecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccH
Confidence            9999999999996533 36899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.78  E-value=2.5e-18  Score=162.88  Aligned_cols=126  Identities=25%  Similarity=0.321  Sum_probs=110.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++.. .+|+.|++|.+...  .....+++.+|++++++++|+|++++++++.     +.+..+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~   75 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN   75 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence            466778999999999999985 46899999998642  3344568999999999999999999999987     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++++|.+++.......+++.....++.++++||.|||   +.+|+||||||
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~  129 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKS  129 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCc
Confidence            9999999999999997754567999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.78  E-value=1.7e-18  Score=166.07  Aligned_cols=120  Identities=24%  Similarity=0.317  Sum_probs=101.1

Q ss_pred             eecccCcccEEeeecC---CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEec
Q 048791          298 IIGRGGYGNVYKGLLP---DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      .||+|+||.||+|...   .+..+|+|+++... ......|.+|+.++++++|+||++++|++.     +....++||||
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~   76 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVMEF   76 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEEC
Confidence            5899999999999753   34579999987533 233457899999999999999999999986     45567999999


Q ss_pred             CCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASN---GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~---~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|+|.+++....   ....+|..++.++.|+++||+|||   +.+++||||||
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp  128 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLAL  128 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCc
Confidence            99999999997532   235788888999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.78  E-value=2.4e-18  Score=164.23  Aligned_cols=124  Identities=29%  Similarity=0.475  Sum_probs=107.5

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +|.....||+|+||.||++...++..||+|++.... ...+.|.+|+.++++++|+|++++.+++.      .+..++||
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~v~   79 (260)
T cd05069           7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYIVT   79 (260)
T ss_pred             HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEEEE
Confidence            466778899999999999998777789999886533 23467899999999999999999998863      34579999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++.......++|..+..++.+++.||+|||   +.+|+||||||
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~  130 (260)
T cd05069          80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRA  130 (260)
T ss_pred             EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCc
Confidence            9999999999997655556899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.78  E-value=3e-18  Score=167.67  Aligned_cols=126  Identities=25%  Similarity=0.361  Sum_probs=107.2

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++... +|+.||||.++.... .....+.+|++++++++|+||+++.+++.     .++..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~   78 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL   78 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-----cCCeE
Confidence            357888899999999999999854 789999999874332 22346789999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ ++|.+++... ...+++.....++.|+++||+|||   +.+|+||||||
T Consensus        79 ~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp  131 (303)
T cd07869          79 TLVFEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKP  131 (303)
T ss_pred             EEEEECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            99999996 7888888643 345899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=1.8e-18  Score=174.40  Aligned_cols=127  Identities=22%  Similarity=0.349  Sum_probs=108.7

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC----Cc-cchHHHHHHHHHHhhCC-CCcccceeeEEeeccc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC----SA-AGDATFKHEVEVIASVR-HVNLVALRGYCIATTQ  361 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~----~~-~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~  361 (425)
                      ..++|...+.||+|+||+|+.|. ..+|..||||.+...    .. ...+...+|+.++++++ ||||++++.+...   
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t---   91 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT---   91 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec---
Confidence            35678888999999999999997 457899999976542    11 22345667999999999 9999999999874   


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        ....++||||+.+|+|.+++.+  ...+.+.....++.|++.|++|+|   +.+|+||||||
T Consensus        92 --~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~  148 (370)
T KOG0583|consen   92 --PTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKP  148 (370)
T ss_pred             --CCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCH
Confidence              4458999999999999999976  456888999999999999999999   99999999996

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.78  E-value=1.8e-18  Score=167.38  Aligned_cols=119  Identities=24%  Similarity=0.344  Sum_probs=101.7

Q ss_pred             ecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||+||++.. .+|+.||||.+....   ....+.+..|++++++++|+||+++.+++.     .++..++||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-----TKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----CCCeEEEEEeCC
Confidence            69999999999984 478999999986422   123356788999999999999999998876     456789999999


Q ss_pred             CCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+|.+++...  ....+++..+..++.||++||+|||   +.+|+||||||
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  125 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKP  125 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            999999888642  3356999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.77  E-value=2.1e-18  Score=165.29  Aligned_cols=126  Identities=26%  Similarity=0.418  Sum_probs=107.3

Q ss_pred             cCcccceeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .+|...+.||+|+||.||+|...    ++..+|+|.++... ....+.|.+|+.++.+++|+||+++.+++.     .++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cCC
Confidence            45677899999999999999852    23479999987432 233468999999999999999999999986     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++.... ..+++.+...|+.|++.||+|||   +.+|+||||||
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp  134 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAA  134 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhch
Confidence            7899999999999999996543 46899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.77  E-value=2.6e-18  Score=166.83  Aligned_cols=125  Identities=23%  Similarity=0.320  Sum_probs=107.5

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||+|+||.||++.. .+++.||||.+....   ....+.+.+|+.++.+++|+|++++.+.+.     .++..+
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~   76 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDALC   76 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCEEE
Confidence            56678899999999999984 478999999986432   122346788999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.......+++..+..++.|++.||.|||   +.+|+||||||
T Consensus        77 lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp  130 (285)
T cd05630          77 LVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKP  130 (285)
T ss_pred             EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCH
Confidence            9999999999999997655556999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=7.2e-20  Score=171.81  Aligned_cols=129  Identities=26%  Similarity=0.356  Sum_probs=107.7

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecC--CCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce-E
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKN--CSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ-R  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~--~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~-~  367 (425)
                      +|...+.||+|.||.|||+. +.+|..||.|.++-  .+.+.......|+.+|++++|||||+.+++...    +.++ .
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~----~~~evl   95 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI----EDNEVL   95 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh----ccchhh
Confidence            45667889999999999998 78999999999973  234445678999999999999999999985442    3334 7


Q ss_pred             EEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                      +|||||+..|+|...+..  +.++.+++....++..|+++||..+|+- -++  |+||||||
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKP  156 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKP  156 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcc
Confidence            899999999999998854  4556799999999999999999999931 155  99999998

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.77  E-value=2e-18  Score=165.36  Aligned_cols=120  Identities=25%  Similarity=0.385  Sum_probs=100.4

Q ss_pred             eecccCcccEEeeecCC---CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEec
Q 048791          298 IIGRGGYGNVYKGLLPD---GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l~~---g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      .||+|+||.||+|...+   ...+|+|.+.... .....+|.+|+++++.++|+||+++++.+.     +....++||||
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e~   76 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLEF   76 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEEe
Confidence            58999999999997433   3568888876433 233467899999999999999999999987     45678999999


Q ss_pred             CCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASN---GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~---~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|+|.+++....   ....++...+.++.||++||+|||   +.+|+||||||
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  128 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLAL  128 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccH
Confidence            99999999997632   233578888999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.77  E-value=2.2e-18  Score=163.38  Aligned_cols=120  Identities=31%  Similarity=0.530  Sum_probs=104.1

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      +.||+|+||.||++.. .+++.||+|.+.... ......|.+|++++++++|+||+++++++.     .+...++||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCCeEEEEeec
Confidence            3689999999999985 478999999886432 333467999999999999999999999987     456789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++|.+++... ...++|.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p  122 (252)
T cd05084          76 QGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAA  122 (252)
T ss_pred             cCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccch
Confidence            999999999643 345899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.77  E-value=1.8e-18  Score=166.60  Aligned_cols=129  Identities=25%  Similarity=0.408  Sum_probs=108.5

Q ss_pred             HhcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      ..++|...+.||+|+||.||+|...      ++..||||+++... .....+|.+|+.++++++|+||+++++++.    
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~----   79 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----   79 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence            3567888899999999999998642      35679999986432 233467999999999999999999999986    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASN--------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       ++...++||||+++|+|.+++....        ...++|..+..++.|+++||+|||   +.+++||||||
T Consensus        80 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp  147 (277)
T cd05062          80 -QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAA  147 (277)
T ss_pred             -CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcch
Confidence             5667899999999999999986522        234789999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.77  E-value=2.7e-18  Score=162.34  Aligned_cols=120  Identities=31%  Similarity=0.496  Sum_probs=105.1

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMK  375 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~  375 (425)
                      ++||+|+||.||+|...+++.||+|.++.... .....|.+|++++++++|+||+++++++.     ..+..++||||++
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~~   75 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT-----QRQPIYIVMELVP   75 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEe-----cCCccEEEEECCC
Confidence            36899999999999988899999999875432 23457899999999999999999999987     4557899999999


Q ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          376 NGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       376 ~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+|.+++... ...++|..+..++.|++.||.|||   +.+++||||||
T Consensus        76 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p  121 (250)
T cd05085          76 GGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAA  121 (250)
T ss_pred             CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCh
Confidence            99999998653 345899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.77  E-value=1.8e-18  Score=165.59  Aligned_cols=134  Identities=28%  Similarity=0.412  Sum_probs=112.2

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc-CC
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL-EG  364 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~-~~  364 (425)
                      .+++.|...+.||+|+||.||+|.. .+++.||+|.+.... ....++..|+.++.++ +|+||+++.+++...... ..
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            3556677788999999999999985 468899999987533 3456788999999998 699999999998754321 13


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++||||+++|+|.+++.......++|.....++.|++.||+|||   +.+|+||||||
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~  139 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKG  139 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCH
Confidence            46799999999999999997655557999999999999999999999   88999999996

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.77  E-value=1.9e-18  Score=173.54  Aligned_cols=125  Identities=21%  Similarity=0.291  Sum_probs=108.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+++.||||.++...   ......+.+|+.++.+++|+||+++++.+.     +++.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~-----~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ-----DKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cCCE
Confidence            3577889999999999999985 468999999996422   223457888999999999999999999886     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp  129 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKP  129 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCH
Confidence            89999999999999999643  46899999999999999999999   99999999997

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.77  E-value=2.1e-18  Score=167.30  Aligned_cols=141  Identities=30%  Similarity=0.443  Sum_probs=118.7

Q ss_pred             ccHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEee
Q 048791          281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIA  358 (425)
Q Consensus       281 f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~  358 (425)
                      ++..++.+++++|...+.||+|+||.||++.. .+++.+|+|.+.... ....++.+|+.++.++ +|+|++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            45567777889999999999999999999985 578999999986532 2345778899999999 79999999999875


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+...+...++|+||+++|+|.+++..  .....++|..+..++.|++.||.|||   +.+|+||||||
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp  156 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKG  156 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            443334578999999999999998864  23456899999999999999999999   88999999996

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.77  E-value=2.7e-18  Score=170.57  Aligned_cols=125  Identities=26%  Similarity=0.332  Sum_probs=108.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+++. .+|..||+|.+.... ....+.|.+|++++.+++|+||+++++++.     .++..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~   79 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEIS   79 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEEE
Confidence            5688889999999999999985 468899999987532 233467999999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...  ..+++.....++.++++||.|||   + .+|+||||||
T Consensus        80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp  132 (331)
T cd06649          80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKP  132 (331)
T ss_pred             EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCCh
Confidence            999999999999999643  35899999999999999999999   5 4699999997

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.77  E-value=7.6e-19  Score=167.61  Aligned_cols=120  Identities=23%  Similarity=0.396  Sum_probs=102.5

Q ss_pred             eeecccCcccEEeeecCC--------CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          297 NIIGRGGYGNVYKGLLPD--------GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~--------g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +.||+|+||.||+|....        ...||+|.+........++|..|+.++..++|+|++++++++.     .+...+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCV-----CGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEE-----eCCCcE
Confidence            358999999999997421        2358899886544455578899999999999999999999997     345679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.... ..++|..+++++.||+.||+|||   +.+|+||||||
T Consensus        76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp  128 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCA  128 (258)
T ss_pred             EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCcc
Confidence            9999999999999996533 36899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.77  E-value=4e-18  Score=165.12  Aligned_cols=130  Identities=25%  Similarity=0.363  Sum_probs=105.1

Q ss_pred             CcccceeecccCcccEEeeec--CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhC---CCCcccceeeEEeeccccCC
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL--PDGSEVALKRFKNCS--AAGDATFKHEVEVIASV---RHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l--~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l---~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +|...+.||+|+||.||+++.  .+|+.||||+++...  ......+.+|+.++.++   +||||++++++|........
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            577788999999999999984  347889999986432  22234667788877766   69999999999864322234


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++|+||++ ++|.+++.......+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp  138 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKP  138 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCH
Confidence            56899999997 79999997655556999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.77  E-value=1.9e-18  Score=169.36  Aligned_cols=127  Identities=24%  Similarity=0.398  Sum_probs=108.7

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||++..      .++..||||.++... ....+.|.+|+++++++ +|+||+++++++.     
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----  109 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT-----  109 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe-----
Confidence            4688889999999999999863      235689999987543 23346789999999999 7999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+..++||||+++|+|.+++.......++|.++..++.+++.||+|||   +.+|+||||||
T Consensus       110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp  169 (302)
T cd05055         110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAA  169 (302)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhcc
Confidence            4567899999999999999997654445899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.77  E-value=1.7e-18  Score=176.98  Aligned_cols=128  Identities=24%  Similarity=0.447  Sum_probs=106.8

Q ss_pred             hcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCC-CCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSA-AGDATFKHEVEVIASVR-HVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||++...      .++.||||+++.... ...+.+.+|++++.++. |+|||+++|+|.    
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~----  111 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT----  111 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc----
Confidence            345677789999999999999843      346899999975332 22357899999999997 999999999997    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCC------------------------------------------------------
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASN------------------------------------------------------  387 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~------------------------------------------------------  387 (425)
                       ..+..++|+||+++|+|.++++...                                                      
T Consensus       112 -~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (401)
T cd05107         112 -KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV  190 (401)
T ss_pred             -cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence             4456899999999999999996421                                                      


Q ss_pred             ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 ------------------------------------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 ------------------------------------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                                                                ...++|...+.|+.|+++||+|||   +.+|+||||||
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp  267 (401)
T cd05107         191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAA  267 (401)
T ss_pred             chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCc
Confidence                                                      124788899999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-18  Score=173.64  Aligned_cols=131  Identities=26%  Similarity=0.327  Sum_probs=107.5

Q ss_pred             HHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc--------------cchHHHHHHHHHHhhCCCCcccc
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA--------------AGDATFKHEVEVIASVRHVNLVA  351 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~--------------~~~~~f~~Ev~il~~l~H~NIV~  351 (425)
                      .+..+.|.....||+|.||.|-++. ..+++.||||++.+...              ...+...+||.+|++++|+|||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            3446778888999999999999998 45799999999964210              11246789999999999999999


Q ss_pred             eeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       352 l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+.+.-++   +.+..|||+|||..|.+...=  .....|+..+..+|..++..||+|||   ..+||||||||
T Consensus       173 LiEvLDDP---~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKP  238 (576)
T KOG0585|consen  173 LIEVLDDP---ESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKP  238 (576)
T ss_pred             EEEeecCc---ccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccch
Confidence            99986543   567889999999998886432  12233999999999999999999999   89999999998

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.77  E-value=2.3e-18  Score=165.99  Aligned_cols=128  Identities=27%  Similarity=0.423  Sum_probs=109.1

Q ss_pred             hcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      +++|...+.||+|+||.||+|...      .+..||+|.+.... ......|.+|+.++++++|+||+++++++.     
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF-----   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----
Confidence            466888899999999999999864      35689999886433 333467999999999999999999999886     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN-----GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~-----~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.+..++||||+++|+|.+++....     ...++|..++.++.||++||+|||   +.+++||||||
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp  144 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAA  144 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccch
Confidence            4556799999999999999996532     125899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.77  E-value=5.5e-19  Score=167.36  Aligned_cols=123  Identities=21%  Similarity=0.299  Sum_probs=102.1

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |....++|+|+||.|||++. ++|+.||||++.....  .-.+-.++|+.+|++++|+|+|.|+..+.     .....+|
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-----rkrklhL   78 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR-----RKRKLHL   78 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-----hcceeEE
Confidence            45557899999999999995 5699999999975432  22355689999999999999999999986     5677899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+...-|++ |.. ....++.....+++.|+++|+.|+|   +.++|||||||
T Consensus        79 VFE~~dhTvL~e-Le~-~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKP  129 (396)
T KOG0593|consen   79 VFEYCDHTVLHE-LER-YPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKP  129 (396)
T ss_pred             EeeecchHHHHH-HHh-ccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCCh
Confidence            999998655544 322 3345899999999999999999999   99999999998

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.77  E-value=2.3e-18  Score=169.86  Aligned_cols=119  Identities=22%  Similarity=0.305  Sum_probs=102.3

Q ss_pred             eeecccCcccEEeeec----CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          297 NIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      +.||+|+||.||++..    .+|+.||+|+++...  ......+.+|++++++++|+||+++++++.     .++..++|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-----TEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCEEEEE
Confidence            5799999999999863    468999999997422  223346788999999999999999999987     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        77 ~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  126 (318)
T cd05582          77 LDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKP  126 (318)
T ss_pred             EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCH
Confidence            9999999999998543  46899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.77  E-value=2.7e-18  Score=165.45  Aligned_cols=129  Identities=23%  Similarity=0.408  Sum_probs=110.1

Q ss_pred             hcCcccceeecccCcccEEeeecCC-----CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPD-----GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~-----g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      .++|...++||+|+||.||+|...+     +..|++|+++... ....+.+.+|+.++.+++|+||+++++++..    +
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----~   80 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE----D   80 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----C
Confidence            4567788999999999999998654     6889999987532 3335678999999999999999999999874    3


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNG------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +...++++||+++|+|.+++.....      ..++|.++..++.|++.||+|||   +.+|+||||||
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p  145 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAA  145 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCH
Confidence            4567999999999999999865321      46999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.77  E-value=2.9e-18  Score=170.59  Aligned_cols=126  Identities=22%  Similarity=0.296  Sum_probs=108.0

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++... +|..+|+|.++... ....+.+.+|++++.+++|+||+++++++.     +++..+
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~   79 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEIS   79 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-----ECCEEE
Confidence            56888899999999999999854 68899999887532 233467899999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...  ..+++.....++.++++||+|||+  ..+|+||||||
T Consensus        80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp  132 (333)
T cd06650          80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKP  132 (333)
T ss_pred             EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCh
Confidence            999999999999999643  458999999999999999999992  24799999997

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.77  E-value=2.3e-18  Score=165.64  Aligned_cols=127  Identities=28%  Similarity=0.490  Sum_probs=108.7

Q ss_pred             cCcccceeecccCcccEEeeecC------CCCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||+|...      ++..||||.++..... ..+.|.+|++++.+++|+||+++++++.     .
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~   79 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT-----E   79 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-----c
Confidence            34666788999999999999853      3578999999764433 4578999999999999999999999987     4


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASN------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++..++||||+++|+|.+++....            ...++|.....++.+++.||+|||   +.+|+||||||
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp  150 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLAT  150 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecccccc
Confidence            567899999999999999996532            245899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.77  E-value=3.7e-18  Score=164.99  Aligned_cols=119  Identities=23%  Similarity=0.307  Sum_probs=102.3

Q ss_pred             ecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||.||++.. .+|+.||+|.+....   ......+..|++++.+++|+||+++.+++.     .+...++||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~-----~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE-----SKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-----cCCeEEEEEecC
Confidence            69999999999985 468999999986421   122345667999999999999999998886     456789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+|.+++.......++|..+..++.||+.||+|||   +.+|+||||||
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp  123 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKP  123 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCCh
Confidence            9999999987655556999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.77  E-value=3.1e-18  Score=163.45  Aligned_cols=125  Identities=26%  Similarity=0.458  Sum_probs=109.4

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||++...++..+|+|.++... ...+.|.+|++++++++|+|++++.+++.     + ...+++
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~~~~v   78 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EPIYII   78 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CCeEEE
Confidence            4577889999999999999998778889999887532 23467899999999999999999999875     2 467999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++.......++|..+..++.+++.||+|||   +.+++||||||
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p  130 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRA  130 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCc
Confidence            99999999999997655567899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.77  E-value=3.2e-18  Score=166.31  Aligned_cols=127  Identities=28%  Similarity=0.476  Sum_probs=108.9

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||.||+++.      .++..+++|.++.......+.|.+|++++++++|+||+++++++.     ++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----DG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----cC
Confidence            3467778999999999999973      245679999987655555578999999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++++|.+++....              ...++|..++.++.||++||+|||   +.+|+||||||
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp  151 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLAT  151 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCc
Confidence            67899999999999999996532              235899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=3.2e-18  Score=178.83  Aligned_cols=125  Identities=14%  Similarity=0.164  Sum_probs=107.2

Q ss_pred             cccceeecccCcccEEeeec-CC-CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PD-GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~-g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |...+.||+|+||.||++.. .+ ++.||+|.+..........+.+|++++++++|+|||++++++.     .++..+||
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~lv  143 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLLLI  143 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEEEE
Confidence            77789999999999999973 34 6788999876544444457788999999999999999999997     45678999


Q ss_pred             EecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++...  ....+++.....++.||+.||.|||   +.+||||||||
T Consensus       144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp  197 (478)
T PTZ00267        144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKS  197 (478)
T ss_pred             EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCH
Confidence            9999999999988652  3446899999999999999999999   89999999997

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.77  E-value=1.5e-18  Score=173.85  Aligned_cols=119  Identities=29%  Similarity=0.394  Sum_probs=100.8

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |...+.||+|+||.||++.. .+|+.||||.+.... ....+.|.+|++++++++|+||+++++++.     +++..++|
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv  150 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD-----HNGEIQVL  150 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec-----cCCeEEEE
Confidence            34457899999999999984 478999999996432 233467899999999999999999999986     56678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+..      .+++.....|+.||++||+|||   +.+|+||||||
T Consensus       151 ~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp  196 (353)
T PLN00034        151 LEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKP  196 (353)
T ss_pred             EecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCH
Confidence            9999999986532      3567788899999999999999   89999999996

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.77  E-value=3.4e-18  Score=163.72  Aligned_cols=129  Identities=26%  Similarity=0.418  Sum_probs=104.2

Q ss_pred             ccceeecccCcccEEeeecCC-CC--eeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCceE
Q 048791          294 SRDNIIGRGGYGNVYKGLLPD-GS--EVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGHQR  367 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~-g~--~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~~~  367 (425)
                      ...+.||+|+||.||+|+..+ ++  .||||.++..  +....+.|.+|++++++++|+||++++++|...... .....
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456789999999999998644 33  5899988743  233456889999999999999999999998643211 12356


Q ss_pred             EEEEecCCCCCHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFAS----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~----~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++||+++|+|.+++...    ....++|.....++.|++.||+|||   +.+|+||||||
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  140 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAA  140 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccch
Confidence            8999999999999988432    2345899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.77  E-value=3.1e-18  Score=165.61  Aligned_cols=125  Identities=21%  Similarity=0.273  Sum_probs=105.6

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||+++.. +++.||||+++...  ....+.+.+|++++.+++|+||+++++++.     +.+..
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~   75 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-----RRGKL   75 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-----cCCEE
Confidence            35778899999999999999964 68899999997432  223457889999999999999999999986     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++++.+..+..  ....+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp  128 (287)
T cd07848          76 YLVFEYVEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKP  128 (287)
T ss_pred             EEEEecCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            99999999877765442  2346899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.77  E-value=5.3e-18  Score=161.29  Aligned_cols=125  Identities=30%  Similarity=0.441  Sum_probs=108.4

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||++.. .|..||+|.++...  ..+.|.+|+.++++++|+|++++++++..    +++..++|
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~lv   78 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYIV   78 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCceEEE
Confidence            3577779999999999999986 47889999986432  24579999999999999999999998753    34568999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||+++|+|.+++.......++|..+..++.+++.||+|||   ..+|+||||||
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  130 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAA  130 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccch
Confidence            99999999999997655556999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.77  E-value=3.6e-18  Score=163.65  Aligned_cols=125  Identities=26%  Similarity=0.449  Sum_probs=107.1

Q ss_pred             CcccceeecccCcccEEeeecC-CC---CeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DG---SEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g---~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +|...+.||+|+||.||+|... ++   ..||||.++.. ......+|..|++++++++|+||+++.+++.     ++..
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~   79 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSRP   79 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-----CCCc
Confidence            3667789999999999999853 33   36999998753 3334568999999999999999999999986     5567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++... ...+++.++..++.|++.||+|||   +.+++||||||
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p  134 (269)
T cd05065          80 VMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAA  134 (269)
T ss_pred             eEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCh
Confidence            89999999999999998653 346899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.77  E-value=3.9e-18  Score=162.90  Aligned_cols=117  Identities=22%  Similarity=0.403  Sum_probs=100.6

Q ss_pred             ecccCcccEEeeecC---CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLLP---DGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||.||+|.+.   ++..||||.+..... ...++|.+|++++++++|+||+++++++.      .+..++||||+
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~~   76 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEMA   76 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEeC
Confidence            899999999999753   456799999875432 33467999999999999999999999874      34679999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+|.+++... ...+++..+.+++.|+++||+|||   +.+++||||||
T Consensus        77 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  123 (257)
T cd05115          77 SGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAA  123 (257)
T ss_pred             CCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccch
Confidence            999999998643 346999999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.76  E-value=2.6e-18  Score=165.90  Aligned_cols=141  Identities=28%  Similarity=0.429  Sum_probs=116.9

Q ss_pred             ccHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEee
Q 048791          281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIA  358 (425)
Q Consensus       281 f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~  358 (425)
                      +.++++..+.++|...+.||+|+||.||++.. .+++.+|+|.++... ....++.+|+.++.++ +|+||+++++++..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            34566777889999999999999999999985 468899999886422 2245788999999999 69999999998864


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .....++..++||||+++|+|.+++..  .....+++.....++.|+++||.|||   +.+|+||||||
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  152 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKG  152 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCH
Confidence            332245678999999999999998754  23356899999999999999999999   89999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.76  E-value=5.4e-18  Score=166.46  Aligned_cols=126  Identities=25%  Similarity=0.317  Sum_probs=107.8

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++.. .+|..+|+|.++... .....++.+|++++.+++|+||+++++++.     .++..+
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~   75 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS   75 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence            3678889999999999999984 468889999987432 223456889999999999999999999997     566889


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++...  ..+++.....++.|+++||+|||.  ..+|+||||||
T Consensus        76 lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p  128 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKP  128 (308)
T ss_pred             EEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCCh
Confidence            999999999999999643  468999999999999999999992  25899999996

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.76  E-value=4.1e-18  Score=169.26  Aligned_cols=126  Identities=22%  Similarity=0.273  Sum_probs=107.5

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++.. +++.+|+|.+....   ......|.+|+.++..++|+||+++.+++.     +.+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ-----DENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cCCE
Confidence            36778899999999999999854 57889999986321   222345888999999999999999999887     5567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++... ...+++.....++.||+.||+|||   +.+|+||||||
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp  130 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKP  130 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCH
Confidence            89999999999999999653 345899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.76  E-value=4e-18  Score=164.81  Aligned_cols=124  Identities=27%  Similarity=0.453  Sum_probs=103.2

Q ss_pred             CcccceeecccCcccEEeeec-CCCC----eeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGS----EVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~----~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +|...+.||+|+||.||+|.. .+|+    .|++|.+..... ....++..|+..+++++|+||++++|++.      +.
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------~~   81 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------GA   81 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------CC
Confidence            466678899999999999985 3454    478888764322 23467888999999999999999999874      34


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++++||+++|+|.+++... ...++|.....++.||+.||+|||   +.+++||||||
T Consensus        82 ~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp  137 (279)
T cd05111          82 SLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAA  137 (279)
T ss_pred             ccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCc
Confidence            568999999999999999653 346999999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.76  E-value=3.7e-18  Score=169.50  Aligned_cols=119  Identities=24%  Similarity=0.280  Sum_probs=102.4

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ++||+|+||.||++.. .+++.||||.++...   ....+.+..|..++.++ +|+||+++++++.     ..+..++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-----~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-----TESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-----cCCEEEEEE
Confidence            3699999999999985 468899999997532   22335678899999998 6999999999987     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++..+..++.|++.||+|||   +.+|+||||||
T Consensus        76 e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  124 (329)
T cd05588          76 EFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKL  124 (329)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCH
Confidence            999999999888543  46999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.76  E-value=2.7e-18  Score=173.65  Aligned_cols=131  Identities=18%  Similarity=0.240  Sum_probs=111.3

Q ss_pred             HHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeec
Q 048791          284 DDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIAT  359 (425)
Q Consensus       284 ~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~  359 (425)
                      .++....++|...+.||+|+||.||++.. .+++.||+|.+...   .......+.+|+++++.++|+||+++++.+.  
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~--  113 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ--  113 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence            44555567899999999999999999985 46889999998632   1223356788999999999999999999886  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         ++...++||||+++|+|.+++..   ..++......++.||+.||+|||   +.+|+||||||
T Consensus       114 ---~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp  170 (371)
T cd05622         114 ---DDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKP  170 (371)
T ss_pred             ---cCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCH
Confidence               56678999999999999999854   24888888999999999999999   89999999997

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.76  E-value=4.3e-18  Score=162.89  Aligned_cols=127  Identities=26%  Similarity=0.468  Sum_probs=108.3

Q ss_pred             hcCcccceeecccCcccEEeeecC-CC---CeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DG---SEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g---~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|+||.||+|... ++   ..+|+|.++... ....++|.+|++++++++|+|++++.+++.     ..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~   78 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KF   78 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cC
Confidence            346778899999999999999864 33   379999987532 333467999999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++++|.+++.... ..++|.++..++.|++.||+|||   +.+|+||||||
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp  135 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAA  135 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccch
Confidence            57899999999999999996533 46999999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.76  E-value=2.9e-18  Score=171.06  Aligned_cols=128  Identities=23%  Similarity=0.410  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||+|..      .+++.||+|+++.... ...+.+..|++++.++ +|+||++++++|..    
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~----   82 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK----   82 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec----
Confidence            3577789999999999999963      2357899999874332 2345688899999999 79999999998864    


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC-------------------------------------------------------
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN-------------------------------------------------------  387 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~-------------------------------------------------------  387 (425)
                      .+...++++||+++|+|.+++....                                                       
T Consensus        83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (337)
T cd05054          83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG  162 (337)
T ss_pred             CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence            4457889999999999999986421                                                       


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 ----GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 ----~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          ...++|..+..++.||++||+|||   +.+|+||||||
T Consensus       163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp  201 (337)
T cd05054         163 DELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAA  201 (337)
T ss_pred             hHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCc
Confidence                126899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.76  E-value=4.2e-18  Score=169.19  Aligned_cols=119  Identities=24%  Similarity=0.280  Sum_probs=101.6

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||++.. .+++.||+|.++...   ....+.+..|+.++.++ +|+||+++++++.     .++..++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-----eCCEEEEEE
Confidence            4699999999999985 468899999997532   22335678899988877 7999999999987     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++.....|+.|+++||+|||   +.+|+||||||
T Consensus        76 E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp  124 (329)
T cd05618          76 EYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKL  124 (329)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCH
Confidence            999999999888543  46999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.76  E-value=3.4e-18  Score=169.26  Aligned_cols=119  Identities=24%  Similarity=0.350  Sum_probs=101.7

Q ss_pred             eeecccCcccEEeeec----CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          297 NIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS----AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +.||+|+||.||++..    .+++.||||.++...    ......+.+|++++.+++|+||+++++++.     .++..+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~~~   76 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-----TGGKLY   76 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-----cCCeEE
Confidence            5799999999999974    357899999987421    222346788999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...  ..+.+.....++.||++||+|||   +.+|+||||||
T Consensus        77 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  128 (323)
T cd05584          77 LILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKP  128 (323)
T ss_pred             EEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            999999999999998643  45888899999999999999999   89999999997

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.76  E-value=4e-18  Score=165.44  Aligned_cols=128  Identities=25%  Similarity=0.397  Sum_probs=107.0

Q ss_pred             hcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      .++|...+.||+|+||.||+|...      .+..||+|.++... ......|.+|++++++++|+||+++++++.     
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----   79 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS-----   79 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-----
Confidence            456888899999999999998642      24589999986433 233457889999999999999999999986     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN--------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +....++||||+++|+|.+++....        ...+++.....++.|++.||.|||   +++|+||||||
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp  147 (288)
T cd05061          80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAA  147 (288)
T ss_pred             CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCCh
Confidence            4557899999999999999996421        245688889999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.76  E-value=4.6e-18  Score=168.22  Aligned_cols=122  Identities=26%  Similarity=0.328  Sum_probs=101.8

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHH---hhCCCCcccceeeEEeeccccCCc
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVI---ASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il---~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      |...+.||+|+||.||++.. .+|+.||||.++...   ....+.+..|+.++   ++++|+||+++++++.     .++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-----~~~   75 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-----TED   75 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-----cCC
Confidence            45568899999999999984 468999999997432   22234566676554   5678999999999987     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|..++..   ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus        76 ~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp  129 (324)
T cd05589          76 HVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKL  129 (324)
T ss_pred             EEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCH
Confidence            78999999999999988843   36999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.76  E-value=6.7e-18  Score=165.65  Aligned_cols=125  Identities=24%  Similarity=0.376  Sum_probs=106.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+|.. .+++.||+|.++... ......+.+|++++++++|+||+++++++.     .++..+
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence            4577889999999999999985 367899999987433 223356889999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ ++|.+++... ...+++.....++.|+++||+|||   +.+|+||||||
T Consensus        81 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp  132 (309)
T cd07872          81 LVFEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKP  132 (309)
T ss_pred             EEEeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            9999998 5888888653 345899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.76  E-value=5.4e-18  Score=163.45  Aligned_cols=125  Identities=27%  Similarity=0.503  Sum_probs=106.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCC----eeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGS----EVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~----~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||.||+|.. ++|+    .||+|.++.. .....+++.+|+.++..++|+||+++++++..      
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------   80 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT------   80 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC------
Confidence            4577779999999999999984 4555    4899998743 33345688999999999999999999999862      


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++++||+++|+|.++++.. ...+++...+.++.||++||+|||   +.+|+||||||
T Consensus        81 ~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp  137 (279)
T cd05109          81 STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAA  137 (279)
T ss_pred             CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccccc
Confidence            3468999999999999999653 346999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.76  E-value=7.5e-18  Score=160.57  Aligned_cols=127  Identities=25%  Similarity=0.362  Sum_probs=110.1

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+|... +|+.||+|.++..   .....+.+.+|++++++++|+|++++++++.     +.+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence            57888899999999999999965 7999999988632   2223567899999999999999999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++..  .....+++.++..++.++++||+|||   +.+|+||||||
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p  134 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKP  134 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcCh
Confidence            8999999999999999864  23456899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.76  E-value=3.6e-18  Score=165.70  Aligned_cols=128  Identities=26%  Similarity=0.404  Sum_probs=108.1

Q ss_pred             hcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||++...      ....+|+|.+.... .....++.+|++++.++ +|+||+++++++.    
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~----   86 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT----   86 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc----
Confidence            345777899999999999999853      33689999987532 23345789999999999 7999999999987    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFAS--------------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~--------------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +++..+++|||+++|+|.+++...              ....++|..+++++.|++.||+|||   +.+|+||||||
T Consensus        87 -~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp  160 (293)
T cd05053          87 -QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAA  160 (293)
T ss_pred             -CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccce
Confidence             456789999999999999999642              2346999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.76  E-value=4.4e-18  Score=168.19  Aligned_cols=119  Identities=22%  Similarity=0.300  Sum_probs=101.5

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ++||+|+||.||+|+. .+|+.||||.++...   ....+.+..|.+++..+ +|+||+++++++.     .++..++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-----~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-----TKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCeEEEEE
Confidence            3699999999999985 468899999987421   23345678899999876 7999999999987     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp  124 (321)
T cd05591          76 EYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKL  124 (321)
T ss_pred             eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            999999999988643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.76  E-value=5.6e-18  Score=163.74  Aligned_cols=127  Identities=27%  Similarity=0.468  Sum_probs=108.8

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +++.....||+|+||.||++..      .++..+|+|.++.........|.+|++++++++|+||+++++++.     .+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----EG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----cC
Confidence            3466678899999999999963      246689999988665555678999999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNG-------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++++||+++|+|.+++.....             ..++|..++.++.|++.||+|||   +.+|+||||||
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp  150 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLAT  150 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccH
Confidence            678999999999999999965321             35899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.76  E-value=4.2e-18  Score=165.81  Aligned_cols=127  Identities=21%  Similarity=0.392  Sum_probs=106.0

Q ss_pred             cCcccceeecccCcccEEeeecCC---------------CCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceee
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD---------------GSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRG  354 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~---------------g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g  354 (425)
                      ++|...+.||+|+||.||++...+               ...||||.++.. .......|.+|++++.+++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            457777899999999999987432               235899998753 2333467999999999999999999999


Q ss_pred             EEeeccccCCceEEEEEecCCCCCHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN----------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       355 ~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~----------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      ++.     ..+..++||||+++++|.+++....          ...++|..++.++.|+++||+|||   +.+++|||||
T Consensus        85 ~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlk  156 (295)
T cd05097          85 VCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLA  156 (295)
T ss_pred             EEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccC
Confidence            997     4567899999999999999985421          124799999999999999999999   8999999999


Q ss_pred             C
Q 048791          425 A  425 (425)
Q Consensus       425 p  425 (425)
                      |
T Consensus       157 p  157 (295)
T cd05097         157 T  157 (295)
T ss_pred             h
Confidence            7

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.76  E-value=5.2e-18  Score=166.21  Aligned_cols=127  Identities=30%  Similarity=0.509  Sum_probs=106.9

Q ss_pred             cCcccceeecccCcccEEeeecC-CCC--eeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGS--EVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~--~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||++... +|.  .+|+|+++... .....+|.+|++++.++ +|+||+++.+++.     +++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-----~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-----CCC
Confidence            46777899999999999999853 454  46888876432 33456889999999999 8999999999986     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|+||+++|+|.+++....              ...+++.+++.++.|+++||+|||   +.+|+||||||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp  152 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAA  152 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccch
Confidence            7899999999999999997532              235899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.76  E-value=5.6e-18  Score=167.62  Aligned_cols=124  Identities=23%  Similarity=0.240  Sum_probs=104.1

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCC-cccceeeEEeeccccCCce
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHV-NLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~-NIV~l~g~~~~~~~~~~~~  366 (425)
                      +|...+.||+|+||.||+|+. .+++.||||.++..   .....+.+..|.+++..++|+ +|+++.+++.     +.+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~   75 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-----TMDR   75 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEE-----cCCE
Confidence            467789999999999999985 45789999998742   223346788899999999765 5778888776     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp  129 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKL  129 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCH
Confidence            89999999999999998643  45899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.76  E-value=6.5e-18  Score=163.45  Aligned_cols=127  Identities=26%  Similarity=0.426  Sum_probs=107.5

Q ss_pred             CcccceeecccCcccEEeeec-----CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .|...+.||+|+||.||++.+     .++..||+|.++... ....+.|.+|++++++++|+|++++.+++...   .+.
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~   81 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGN   81 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCC
Confidence            456678899999999999873     357899999987543 33346799999999999999999999998642   235


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++... ...++|..+..++.|++.||+|||   +.+|+||||||
T Consensus        82 ~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp  137 (284)
T cd05079          82 GIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAA  137 (284)
T ss_pred             ceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccch
Confidence            679999999999999998643 235899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.76  E-value=5.4e-18  Score=164.54  Aligned_cols=126  Identities=25%  Similarity=0.390  Sum_probs=105.4

Q ss_pred             CcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +|...+.||+|+||.||+|...      ....+|+|.+.... ....+.+.+|+.++++++|+||+++++.+.     +.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence            3667789999999999999742      23578999887433 233467999999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFAS----------------------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRD  422 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~----------------------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRD  422 (425)
                      +..++|+||+++|+|.+++...                      ....++|...+.++.|++.||+|||   +.+|+|||
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~d  152 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRD  152 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhh
Confidence            6689999999999999998642                      1235899999999999999999999   89999999


Q ss_pred             CCC
Q 048791          423 IKA  425 (425)
Q Consensus       423 LKp  425 (425)
                      |||
T Consensus       153 ikp  155 (290)
T cd05045         153 LAA  155 (290)
T ss_pred             hhh
Confidence            997

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.76  E-value=8e-18  Score=160.74  Aligned_cols=127  Identities=23%  Similarity=0.341  Sum_probs=108.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+|.. .+++.||||.++...   ......|.+|++++++++|+||+++++++.     ..+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence            4678889999999999999984 478999999876422   233457899999999999999999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|+||+++|+|.+++..  .....+++.....++.|+++||+|||   +.+|+||||||
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~  134 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKP  134 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCH
Confidence            8999999999999988853  23345899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.76  E-value=9.9e-18  Score=159.08  Aligned_cols=126  Identities=20%  Similarity=0.367  Sum_probs=109.7

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|+..+.||+|+||.||.++ ..+++.+++|++...  +.....++.+|++++++++|+||+++++++.     +.+..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence            46778999999999998887 456899999998643  2344567899999999999999999999997     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|||+++|+|.+++.......+++..+..++.|+++||+|||   +.+++||||||
T Consensus        76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p  129 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKT  129 (256)
T ss_pred             EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCh
Confidence            9999999999999997654556899999999999999999999   88999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.76  E-value=4.6e-18  Score=164.67  Aligned_cols=128  Identities=30%  Similarity=0.447  Sum_probs=108.6

Q ss_pred             hcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      .++|...+.||+|+||.||++...      ++..||+|.++... ....++|.+|++++++++|+||+++++++.     
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~-----   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA-----   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-----
Confidence            456788899999999999999742      46789999987432 334567999999999999999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN--------------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRD  422 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRD  422 (425)
                      .+...++|+||+++|+|.+++....                    ...++|..++.++.|++.||+|||   ..+++|||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~d  155 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRD  155 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeeccc
Confidence            4556899999999999999996421                    235889999999999999999999   89999999


Q ss_pred             CCC
Q 048791          423 IKA  425 (425)
Q Consensus       423 LKp  425 (425)
                      |||
T Consensus       156 l~p  158 (288)
T cd05050         156 LAT  158 (288)
T ss_pred             ccH
Confidence            997

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=4.5e-18  Score=163.95  Aligned_cols=126  Identities=22%  Similarity=0.331  Sum_probs=110.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++.. .+++.||+|.++.......+.|.+|++++++++|+|++++++.+.     .+...++
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   79 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLWI   79 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEEE
Confidence            4577778899999999999986 468999999997655555578999999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+++... ...+++.....++.|++.||.|||   +.+|+||||||
T Consensus        80 v~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p  131 (280)
T cd06611          80 LIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKA  131 (280)
T ss_pred             EeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence            99999999999998653 346999999999999999999999   89999999997

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.76  E-value=6.8e-18  Score=163.08  Aligned_cols=124  Identities=27%  Similarity=0.431  Sum_probs=105.2

Q ss_pred             cccceeecccCcccEEeee-----cCCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGL-----LPDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~-----l~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +...+.||+|+||+||++.     ..+++.||+|.++... ......|.+|++++++++|+||+++.+++...   ....
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~   82 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---GGKG   82 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CCce
Confidence            3667889999999998754     2467899999987533 23456889999999999999999999998642   2346


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++..   ..++|.++..++.|+++||+|||   +.+|+||||||
T Consensus        83 ~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp  135 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAA  135 (283)
T ss_pred             EEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCh
Confidence            7999999999999999954   35999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=5.1e-18  Score=167.96  Aligned_cols=128  Identities=24%  Similarity=0.351  Sum_probs=112.3

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .+.|.....||.|.-++||+|. .+.+..||||++.-.. ....++..+|+..|+-++||||++.+..++     .++..
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-----v~~~L   99 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-----VDSEL   99 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-----eccee
Confidence            3457778999999999999998 6778999999997432 233578899999999999999999998887     56788


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||.||..||+.+.++..-...+++.....|..++.+||.|||   +.+-|||||||
T Consensus       100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKA  154 (516)
T KOG0582|consen  100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKA  154 (516)
T ss_pred             EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceeccccc
Confidence            99999999999999998755555999999999999999999999   99999999997

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.75  E-value=5.8e-18  Score=167.60  Aligned_cols=119  Identities=26%  Similarity=0.360  Sum_probs=99.5

Q ss_pred             eeecccCcccEEeee-cCCCCeeEEeeecCC---CccchHHHHHHHH-HHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGL-LPDGSEVALKRFKNC---SAAGDATFKHEVE-VIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~---~~~~~~~f~~Ev~-il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||+++ ..+|+.||||.+...   ......++..|.. +++.++|+||+++++.+.     .++..++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-----~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----cCCEEEEEE
Confidence            369999999999998 457899999998642   1223345666665 467799999999999886     566789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|..++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp  124 (325)
T cd05604          76 DFVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKP  124 (325)
T ss_pred             cCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCH
Confidence            99999999988854  346899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.75  E-value=5.4e-18  Score=166.12  Aligned_cols=127  Identities=24%  Similarity=0.379  Sum_probs=107.3

Q ss_pred             cCcccceeecccCcccEEeeecC--------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP--------DGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~--------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ++|...+.||+|+||.||++...        ++..+|+|.++... .....++.+|++++.++ +|+||+++++++.   
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~---   94 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT---   94 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe---
Confidence            45788899999999999998731        23579999997532 33346788999999999 7999999999987   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        +.+..++||||+++|+|.+++....              ...++|.+++.++.|++.||+|||   +.+++||||||
T Consensus        95 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp  168 (307)
T cd05098          95 --QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAA  168 (307)
T ss_pred             --cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccH
Confidence              4567899999999999999997532              135899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.75  E-value=1.4e-18  Score=175.86  Aligned_cols=124  Identities=26%  Similarity=0.383  Sum_probs=108.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|.||.||||+- .+.+.||+|.+.+..+  ++.+...+|++++++++|||||.++.++.     ...+.
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE-----t~~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE-----TSAHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc-----ccceE
Confidence            4577778899999999999984 4688999999975433  34567899999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|.||+.+ +|..+|...  ..|++.+.+.|+.++..||.|||   +.+|+|||+||
T Consensus        77 ~vVte~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kP  128 (808)
T KOG0597|consen   77 WVVTEYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKP  128 (808)
T ss_pred             EEEehhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCc
Confidence            999999985 999999653  46999999999999999999999   99999999997

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.75  E-value=6.3e-18  Score=162.02  Aligned_cols=125  Identities=27%  Similarity=0.400  Sum_probs=106.0

Q ss_pred             cCcccceeecccCcccEEeeecCC----CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD----GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~----g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|...+    ...||||...... ....+.|.+|+.++++++|+||+++++++.      .+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~------~~   79 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT------EN   79 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc------CC
Confidence            346777899999999999998533    3478999887544 344568999999999999999999999885      34


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++... ...++|..+..++.++++||+|||   +.+++||||||
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p  135 (270)
T cd05056          80 PVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAA  135 (270)
T ss_pred             CcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCh
Confidence            568999999999999999653 335899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.75  E-value=7.5e-18  Score=159.56  Aligned_cols=123  Identities=27%  Similarity=0.441  Sum_probs=107.0

Q ss_pred             cccceeecccCcccEEeeecC-CCCeeEEeeecCCC-----ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS-----AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~-----~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      |...+.||+|+||.||+|... ++..|++|.+....     ....+.+.+|++++++++|+||+++.+++.     .+..
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~   76 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----EEDN   76 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----cCCe
Confidence            566788999999999999965 78999999986432     223467899999999999999999999986     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++++||+++++|.+++...  ..+++..+..++.++++||+|||   +.+|+||||||
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~  130 (258)
T cd06632          77 LYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKG  130 (258)
T ss_pred             EEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            89999999999999999643  35899999999999999999999   89999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.75  E-value=6.3e-18  Score=167.42  Aligned_cols=124  Identities=22%  Similarity=0.237  Sum_probs=103.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCce
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +|...+.||+|+||.||++.. .+|+.||||.++...   ....+.+..|.+++..+. |++|+++.+++.     ..+.
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~   75 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ-----TVDR   75 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe-----cCCE
Confidence            366678999999999999984 568999999987421   223456788999999886 567778888776     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....|+.||+.||+|||   +.+|+||||||
T Consensus        76 ~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp  129 (323)
T cd05615          76 LYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKL  129 (323)
T ss_pred             EEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            89999999999999998543  45999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.75  E-value=5.7e-18  Score=165.59  Aligned_cols=127  Identities=22%  Similarity=0.398  Sum_probs=106.7

Q ss_pred             cCcccceeecccCcccEEeeec--------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL--------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l--------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ++|...+.||+|+||.||++..        .++..||+|.++... ....+++.+|++++..+ +|+||+++++++.   
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~---   91 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT---   91 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe---
Confidence            4567778999999999999963        134579999987432 33446789999999999 8999999999987   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        ..+..++||||+++|+|.+++....              ...++|.++..++.||++||+|||   +.+|+||||||
T Consensus        92 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp  165 (304)
T cd05101          92 --QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAA  165 (304)
T ss_pred             --cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeeccccc
Confidence              4567899999999999999997531              235899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.75  E-value=7.1e-18  Score=164.54  Aligned_cols=127  Identities=28%  Similarity=0.486  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeecC-CCC--eeEEeeecCC-CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGS--EVALKRFKNC-SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~--~VAVK~l~~~-~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|... ++.  .+++|.++.. .....+.|.+|++++.++ +|+||+++++++.     +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence            46777899999999999999864 343  4789988742 333456799999999999 7999999999986     455


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|+||+++|+|.+++....              ...+++.....|+.|++.||+|||   +.+|+||||||
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp  147 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAA  147 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCc
Confidence            6899999999999999996521              135899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.75  E-value=7.7e-18  Score=160.99  Aligned_cols=130  Identities=26%  Similarity=0.418  Sum_probs=106.1

Q ss_pred             cccceeecccCcccEEeeecCC----CCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPD----GSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~----g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      |...+.||+|+||.||+|....    +..||||+++...  ....+++.+|++.+++++|+||+++++++...... ...
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4456889999999999998532    3679999987432  23346899999999999999999999998743321 123


Q ss_pred             eEEEEEecCCCCCHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFAS----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~----~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++++||+++|+|.+++...    ....+++.....++.|++.||+|||   +.+|+||||||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp  141 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAA  141 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccch
Confidence            469999999999999998653    2346999999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.75  E-value=8.6e-18  Score=164.18  Aligned_cols=124  Identities=23%  Similarity=0.407  Sum_probs=110.0

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++. ..+++.||+|.+........+.+.+|+.+++.++|+||+++++++.     .++..++
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~l   93 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV   93 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEEE
Confidence            567778999999999999998 4579999999997655455567899999999999999999999987     5667899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+++.+   ..+++.++..++.++++||.|||   +.+|+||||||
T Consensus        94 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p  143 (297)
T cd06656          94 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKS  143 (297)
T ss_pred             eecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            9999999999999854   35899999999999999999999   89999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.75  E-value=9.1e-18  Score=163.91  Aligned_cols=124  Identities=23%  Similarity=0.403  Sum_probs=109.4

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .+|...+.||+|+||.||+|. ..+++.||+|.+........+.+.+|+.+++.++|+||+++++++.     .+...++
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~~l   94 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV   94 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEEEE
Confidence            467777899999999999998 4578999999997655455578899999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+++.+   ..+++.++..++.|++.||+|||   +.+|+||||||
T Consensus        95 v~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp  144 (296)
T cd06654          95 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS  144 (296)
T ss_pred             eecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            9999999999999854   35899999999999999999999   88999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.75  E-value=6e-18  Score=162.46  Aligned_cols=120  Identities=21%  Similarity=0.330  Sum_probs=99.4

Q ss_pred             eecccCcccEEeeecCCC---CeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEec
Q 048791          298 IIGRGGYGNVYKGLLPDG---SEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l~~g---~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      .||+|+||.||+|...++   ..+++|.++... ....+.|.+|+++++.++|+||+++++.+.     .....++||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~~~~lv~e~   76 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-----EAIPYLLVFEY   76 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-----CCCccEEEEec
Confidence            589999999999975433   345677665432 334578999999999999999999999997     45678999999


Q ss_pred             CCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|+|.+++....  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp  127 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLAL  127 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCcc
Confidence            99999999997532  235677888899999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.75  E-value=6.4e-18  Score=161.33  Aligned_cols=124  Identities=22%  Similarity=0.390  Sum_probs=107.5

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc------cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA------AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +|...+.||+|+||.||++. ..+++.||+|.+.....      ...+.+.+|+.++++++|+||+++++++.     ++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-----ED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----cC
Confidence            46778899999999999998 46789999999864321      12467899999999999999999999986     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++|+||+++++|.+++...  ..+++.....++.|+++||.|||   +.+++||||||
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~  131 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKG  131 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            6789999999999999998643  46899999999999999999999   88999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.75  E-value=7.4e-18  Score=166.49  Aligned_cols=119  Identities=23%  Similarity=0.311  Sum_probs=100.6

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||+|.. .+++.||||.++...   ....+.+..|..++..+ +||||+++++++.     +.+..++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence            3699999999999985 457899999997531   22335677788888765 8999999999987     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        76 ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp  124 (316)
T cd05619          76 EYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKL  124 (316)
T ss_pred             eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCH
Confidence            999999999998642  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.75  E-value=8.5e-18  Score=166.68  Aligned_cols=124  Identities=25%  Similarity=0.312  Sum_probs=105.2

Q ss_pred             CcccceeecccCcccEEeeec----CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhCC-CCcccceeeEEeecccc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS----AAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQL  362 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~  362 (425)
                      +|...+.||+|+||.||+++.    .+|+.||+|.++...    ....+.+..|++++.+++ |+||+++.+++.     
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-----   75 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ-----   75 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence            467789999999999999873    468899999986421    122356788999999995 999999998876     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+..++||||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp  133 (332)
T cd05614          76 TEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKL  133 (332)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCH
Confidence            456789999999999999999643  45899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.75  E-value=1e-17  Score=162.88  Aligned_cols=124  Identities=27%  Similarity=0.356  Sum_probs=106.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCcc-----chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAA-----GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~-----~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +|...+.||+|+||.||+|.. .+|+.||||+++.....     ....+..|++++.+++|+||+++++++.     +.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence            366678899999999999985 46899999999754322     2356788999999999999999999987     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+ +|+|.+++.... ..++|..+..++.||++||+|||   +.+|+||||||
T Consensus        76 ~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p  130 (298)
T cd07841          76 NINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKP  130 (298)
T ss_pred             EEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCh
Confidence            789999999 899999996533 36999999999999999999999   88999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.75  E-value=8.9e-18  Score=159.14  Aligned_cols=126  Identities=24%  Similarity=0.350  Sum_probs=109.4

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++... +|..||+|.+...  .....+.+.+|++++++++|+||+++++.+.     .....+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-----~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-----ENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-----cCCeEE
Confidence            4677899999999999999854 6889999998642  2233467889999999999999999999986     556789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++.......++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~  129 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKS  129 (257)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCH
Confidence            9999999999999997655556899999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.75  E-value=8.6e-18  Score=162.06  Aligned_cols=126  Identities=27%  Similarity=0.497  Sum_probs=106.2

Q ss_pred             CcccceeecccCcccEEeeecCC------CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPD------GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~------g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +|...+.||+|+||.||+|....      ...||+|.++... .....+|.+|++++.+++|+||+++++++.     ..
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~~   80 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-----KE   80 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----CC
Confidence            46667889999999999998532      2579999987433 233467999999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNG--------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~--------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..+++|||+++|+|.+++.....              ..+++.....++.|+++||+|||   ..+|+||||||
T Consensus        81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp  152 (283)
T cd05048          81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAA  152 (283)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccc
Confidence            568999999999999999965311              45899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.75  E-value=6.6e-18  Score=167.02  Aligned_cols=119  Identities=21%  Similarity=0.297  Sum_probs=101.7

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||+++. .+++.||||.++..   .....+.+..|.+++..+ +|+||+++++++.     ..+..++||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-----~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ-----TPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE-----cCCEEEEEE
Confidence            3699999999999985 46889999998642   123345678899999877 6999999999986     566789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        76 Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp  124 (320)
T cd05590          76 EFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKL  124 (320)
T ss_pred             cCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCH
Confidence            999999999988643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.75  E-value=6.3e-18  Score=161.43  Aligned_cols=127  Identities=25%  Similarity=0.372  Sum_probs=109.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.+|||.+....   .....+|.+|+.++++++|+||+++++++.     +++.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence            4577778999999999999984 578999999886422   223468899999999999999999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+++|||+++++|.+++..  .....++|.....++.+|++||+|||   +.+|+||||||
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p  134 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKP  134 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            8999999999999998864  23456899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.75  E-value=7.3e-18  Score=166.51  Aligned_cols=119  Identities=25%  Similarity=0.355  Sum_probs=98.7

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHH-HHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVE-VIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~-il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ++||+|+||.||+++. .+|+.||+|.+....   ......+..|.. +++.++|+||+++++++.     +.+..++||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-----~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-----TAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCEEEEEE
Confidence            4699999999999985 468999999986422   122345566654 678899999999999886     566789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp  124 (321)
T cd05603          76 DYVNGGELFFHLQR--ERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKP  124 (321)
T ss_pred             cCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCH
Confidence            99999999988854  345888889999999999999999   89999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.75  E-value=7.6e-18  Score=160.46  Aligned_cols=117  Identities=24%  Similarity=0.403  Sum_probs=100.9

Q ss_pred             eecccCcccEEeeec---CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          298 IIGRGGYGNVYKGLL---PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l---~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      .||+|+||.||+|.+   .++..+|+|+++...  ....++|.+|+.++++++|+||++++|++.      .+..++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence            589999999999964   357899999987433  223568999999999999999999999874      345689999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp  123 (257)
T cd05116          76 LAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAA  123 (257)
T ss_pred             cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccch
Confidence            99999999999543  46899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.75  E-value=1e-17  Score=161.81  Aligned_cols=123  Identities=27%  Similarity=0.363  Sum_probs=107.2

Q ss_pred             ccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          294 SRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      ...+.||+|+||.||++... ++..+++|.+........+.|.+|++++++++|+|++++++++.     .++..++|+|
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v~e   82 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWILIE   82 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEEEE
Confidence            44577999999999999854 57889999987655555678999999999999999999999987     4567899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+++|+|..++... ...++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        83 ~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp  131 (282)
T cd06643          83 FCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKA  131 (282)
T ss_pred             ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCc
Confidence            99999999988653 346999999999999999999999   89999999997

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.75  E-value=6.2e-18  Score=161.66  Aligned_cols=125  Identities=30%  Similarity=0.399  Sum_probs=108.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++.. .+++.||+|.++.........+.+|+.++.+++|+||+++++.+.     .++..++
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~l   83 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLWI   83 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEEE
Confidence            3566668899999999999984 568999999987654444567889999999999999999999987     4667899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+++++|.+++...  ..+++.+...++.|++.||.|||   ..+|+||||||
T Consensus        84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  134 (267)
T cd06645          84 CMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKG  134 (267)
T ss_pred             EEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            99999999999998543  46899999999999999999999   88999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.75  E-value=9e-18  Score=159.52  Aligned_cols=122  Identities=30%  Similarity=0.472  Sum_probs=106.3

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +|...+.||+|+||.||++.. +++.||+|.++...  ..+.|.+|+.++.+++|+|++++++++..      +..++||
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~v~   77 (254)
T cd05083           7 KLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYIVM   77 (254)
T ss_pred             HceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEEEE
Confidence            467779999999999999985 67889999986432  24578999999999999999999998752      3469999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++.......+++..+..++.|+++||.|||   +.+++||||||
T Consensus        78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p  128 (254)
T cd05083          78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAA  128 (254)
T ss_pred             ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCc
Confidence            9999999999997655556899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.75  E-value=9.7e-18  Score=160.76  Aligned_cols=123  Identities=28%  Similarity=0.450  Sum_probs=105.1

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---c-------chHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---A-------GDATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~-------~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      |...+.||+|+||.||+|.. .+|+.||||.++....   .       ..+.+.+|++++.+++|+|++++++++.    
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----   78 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET----   78 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec----
Confidence            56678999999999999984 4689999998853211   0       1246788999999999999999999986    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       ..+..++|+||+++|+|.+++...  ..+++..+..++.||+.||.|||   +.+++||||||
T Consensus        79 -~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~  136 (272)
T cd06629          79 -TEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKA  136 (272)
T ss_pred             -cCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCCh
Confidence             556789999999999999999654  46899999999999999999999   88999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.75  E-value=2.1e-18  Score=164.45  Aligned_cols=129  Identities=24%  Similarity=0.414  Sum_probs=115.5

Q ss_pred             cHHHHHHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeec
Q 048791          282 TFDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIAT  359 (425)
Q Consensus       282 ~~~ei~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~  359 (425)
                      +|+|+-+-|+     ++||+|+|+.|--++ +.+|.++|||++.+..........+|++++...+ |+||+.|+.|+.  
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE--  146 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFE--  146 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhc--
Confidence            4677777775     789999999999887 7789999999998877777888999999999996 999999999997  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         ++...|||+|-|.+|+|.+++++.  +.++.....++..+||.||.|||   .++|.|||+||
T Consensus       147 ---dd~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKP  204 (463)
T KOG0607|consen  147 ---DDTRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKP  204 (463)
T ss_pred             ---ccceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCc
Confidence               556779999999999999999753  46899999999999999999999   99999999998

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.75  E-value=1.7e-17  Score=157.52  Aligned_cols=126  Identities=18%  Similarity=0.296  Sum_probs=108.9

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|...+.||+|+||.||+++. .+++.+|+|.++.. .....+.+.+|+.++++++|+||+++.+.+.     .++..++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-----ADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEEE
Confidence            366778999999999999984 46899999998642 2334567889999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++.......+++.....++.++++||.|||   +.+|+|+||||
T Consensus        76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p  128 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKS  128 (255)
T ss_pred             EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCc
Confidence            999999999999987655556899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.75  E-value=1e-17  Score=165.68  Aligned_cols=124  Identities=21%  Similarity=0.230  Sum_probs=104.0

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCce
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +|...+.||+|+||.||++.. .+++.||||.++...   ....+.+..|..++..+ +|++|+++.+++.     ..+.
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~   75 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-----TMDR   75 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-----cCCE
Confidence            467789999999999999985 467899999987432   22234577788888887 5889999998886     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  129 (323)
T cd05616          76 LYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKL  129 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCH
Confidence            89999999999999998543  45899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.75  E-value=1.2e-17  Score=159.39  Aligned_cols=124  Identities=29%  Similarity=0.542  Sum_probs=107.2

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCc------cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA------AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +|...+.||+|+||.||+|...+|+.+|||.++....      .....+.+|++++++++|+||+++.+++.     +.+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~   75 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-----DDN   75 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----cCC
Confidence            3667789999999999999988899999999864221      11246889999999999999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|+||+++++|.+++...  ..+++.....++.|++.||+|||   +.+|+|+||||
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  130 (265)
T cd06631          76 TISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKG  130 (265)
T ss_pred             eEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCH
Confidence            889999999999999999643  35899999999999999999999   88999999996

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.75  E-value=1.6e-17  Score=157.32  Aligned_cols=126  Identities=19%  Similarity=0.273  Sum_probs=109.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++.. .+++.+|||.+...  .....+.+.+|++++++++|+|++++++...     .++..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL-----EDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe-----cCCEEE
Confidence            467778999999999999884 57889999998643  2233568999999999999999999999876     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++.......+++..+..++.++++||+|||   +.+|+||||||
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~  129 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKT  129 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            9999999999999997655556899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.75  E-value=9.8e-18  Score=183.58  Aligned_cols=127  Identities=23%  Similarity=0.331  Sum_probs=108.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+|.. .+|+.||||++.....   ...++|.+|++++++++||||+++++++.     +++.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eCCE
Confidence            4688889999999999999984 4689999999974321   22467999999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFAS---------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~---------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...         ....+++...+.|+.||++||+|||   +.+|+||||||
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKP  141 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKP  141 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCch
Confidence            89999999999999998641         1234678889999999999999999   88999999997

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=2.5e-18  Score=174.64  Aligned_cols=123  Identities=27%  Similarity=0.431  Sum_probs=107.9

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      .|..-..||+|..|.||.+. ..+++.||||++........+-..+|+.+|+..+|+|||+++.-+.     .+++.++|
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-----v~deLWVV  348 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL-----VGDELWVV  348 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc-----ccceeEEE
Confidence            45556789999999999997 6688999999998655455566789999999999999999988776     56788999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||++|+|.|.+..   ..+++.+...|+.++++||+|||   ..+|||||||.
T Consensus       349 MEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKS  397 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKS  397 (550)
T ss_pred             EeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHH---hcceeeecccc
Confidence            999999999998843   35999999999999999999999   99999999995

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.75  E-value=9.8e-18  Score=162.72  Aligned_cols=127  Identities=22%  Similarity=0.340  Sum_probs=107.4

Q ss_pred             cCcccceeecccCcccEEeeecCC-----------------CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD-----------------GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVAL  352 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~-----------------g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l  352 (425)
                      .+|...+.||+|+||.||++...+                 +..||+|.+.... ....++|.+|++++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            457778999999999999987432                 2468999987533 3345689999999999999999999


Q ss_pred             eeEEeeccccCCceEEEEEecCCCCCHHHHHhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 048791          353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDI  423 (425)
Q Consensus       353 ~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~---------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDL  423 (425)
                      ++++.     .+...++|+||+++++|.+++....         ...++|.....++.|+++||+|||   +.+|+||||
T Consensus        85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dl  156 (296)
T cd05051          85 LGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDL  156 (296)
T ss_pred             EEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCcccccc
Confidence            99987     4467899999999999999996532         126899999999999999999999   889999999


Q ss_pred             CC
Q 048791          424 KA  425 (425)
Q Consensus       424 Kp  425 (425)
                      ||
T Consensus       157 kp  158 (296)
T cd05051         157 AT  158 (296)
T ss_pred             ch
Confidence            97

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.75  E-value=1.3e-17  Score=160.41  Aligned_cols=127  Identities=22%  Similarity=0.417  Sum_probs=107.8

Q ss_pred             CcccceeecccCcccEEeeecC-----CCCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-----DGSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-----~g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .|...+.||+|+||.||++.+.     ++..||||.++..... ..+.|.+|++++++++|+||+++.+++...   .+.
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~~   81 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GGR   81 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CCC
Confidence            3555688999999999999853     3689999999754332 457899999999999999999999988632   245


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++.... ..++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p  137 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAA  137 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            6899999999999999996532 35999999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.75  E-value=5.9e-18  Score=163.92  Aligned_cols=130  Identities=26%  Similarity=0.379  Sum_probs=106.1

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc-cc-hHHHHHHHHHHhhCCCCc-ccceeeEEeecccc-CCce
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA-AG-DATFKHEVEVIASVRHVN-LVALRGYCIATTQL-EGHQ  366 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~-~~-~~~f~~Ev~il~~l~H~N-IV~l~g~~~~~~~~-~~~~  366 (425)
                      .|...++||+|.||+||+|+ ..+|+.||+|++.-... .+ ...-.+|+.++.+++|+| ||+|.+++.+.+.. ....
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            34555779999999999998 56799999999975433 22 245689999999999999 99999999864321 1236


Q ss_pred             EEEEEecCCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNG--PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~--~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|+||+. -+|.+++.....  ..++-...+.++.|+.+||+|||   +.+|+||||||
T Consensus        92 l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKP  148 (323)
T KOG0594|consen   92 LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKP  148 (323)
T ss_pred             EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCc
Confidence            789999997 799999966432  35777889999999999999999   99999999998

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.75  E-value=9.9e-18  Score=159.18  Aligned_cols=120  Identities=28%  Similarity=0.407  Sum_probs=104.3

Q ss_pred             eeecccCcccEEeeecCC--C--CeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLLPD--G--SEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~--g--~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|++|.||+|...+  +  ..||||.+..... ...+.|.+|++++++++|+||+++++.+.     + ...++|+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence            368999999999998533  3  3699999986554 45678999999999999999999999986     3 6789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++.+.....++|.....++.|+++||+|||   +.+++||||||
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p  125 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAA  125 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCc
Confidence            9999999999997644356999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.75  E-value=1.1e-17  Score=165.42  Aligned_cols=119  Identities=26%  Similarity=0.369  Sum_probs=99.0

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHH-HHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVE-VIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~-il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||+||++.. .+|+.||||.+....   .....++..|.. +++.++|+||+++++.+.     +.+..++||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-----~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-----eCCEEEEEE
Confidence            3699999999999985 478999999986421   122345556655 567899999999999886     466789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp  124 (323)
T cd05575          76 DYVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKP  124 (323)
T ss_pred             cCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCH
Confidence            99999999999864  346899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.75  E-value=1.3e-17  Score=160.76  Aligned_cols=125  Identities=27%  Similarity=0.511  Sum_probs=106.2

Q ss_pred             cCcccceeecccCcccEEeeecC-CCC----eeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGS----EVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~----~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .+|...+.||+|+||.||+|... +|.    .||+|.++.... ....++.+|++++++++|+||++++++|..      
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------   80 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------   80 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence            34667789999999999999853 333    589998875432 345689999999999999999999999862      


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++|+||+++|+|.+++... ...++|.....++.||++||+|||   +.+|+||||||
T Consensus        81 ~~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p  137 (279)
T cd05057          81 SQVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAA  137 (279)
T ss_pred             CceEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCc
Confidence            5679999999999999999753 335999999999999999999999   79999999997

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.75  E-value=9.7e-18  Score=169.18  Aligned_cols=128  Identities=26%  Similarity=0.341  Sum_probs=105.9

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++.. .+|+.||||++....  ....+.+.+|+++++.++|+||+++++++...........+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            467789999999999999984 579999999986432  22346788999999999999999999998743211123689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||++ ++|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        81 lv~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp  131 (372)
T cd07853          81 VVTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKP  131 (372)
T ss_pred             EEeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCh
Confidence            9999997 688887743  346999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.74  E-value=1e-17  Score=165.37  Aligned_cols=119  Identities=23%  Similarity=0.281  Sum_probs=99.3

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||++.. .+++.||||.++...   ....+.+..|.+++... +|+||+++++++.     .++..++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-----~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-----TKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence            3699999999999985 468899999987421   22334566777777754 7999999999886     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp  124 (316)
T cd05592          76 EYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKL  124 (316)
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCH
Confidence            999999999988643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.74  E-value=2e-17  Score=156.94  Aligned_cols=126  Identities=24%  Similarity=0.351  Sum_probs=109.2

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++.. .+|+.||+|++...  .....+++.+|++++++++|+||+++.+++.     +.+..+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE-----ENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-----CCCeEE
Confidence            367789999999999999984 57899999998642  2333468899999999999999999999986     566889


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++.......+++.+.+.++.|++.||+|||   +.+++|+||||
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~  129 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKS  129 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence            9999999999999997654456899999999999999999999   88999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.74  E-value=1e-17  Score=160.85  Aligned_cols=127  Identities=25%  Similarity=0.379  Sum_probs=107.8

Q ss_pred             cCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||+|...      ++..||+|.+.... .....+|.+|++++..++|+||+++++++.     .
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~   80 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-----T   80 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----C
Confidence            46777899999999999999853      34689999987543 233467899999999999999999999987     4


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASN--------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~--------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +...++||||+++|+|.+++....        ...++|.....++.|++.||.|||   +.+|+||||||
T Consensus        81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p  147 (277)
T cd05032          81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAA  147 (277)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCh
Confidence            567899999999999999996522        234799999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.74  E-value=9.6e-18  Score=162.27  Aligned_cols=126  Identities=22%  Similarity=0.301  Sum_probs=107.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||+||++.. .+|+.||+|.+.... ....+.|.+|++++..++|+||+++++++.     ..+..+
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~   79 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-----NENNIC   79 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-----cCCEEE
Confidence            3456668899999999999984 568999999886432 334578999999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...  +.++|.....++.+++.||.|||+  ..+|+||||||
T Consensus        80 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p  132 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKP  132 (284)
T ss_pred             EEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCH
Confidence            999999999999988542  468999999999999999999992  35799999996

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.74  E-value=1.1e-17  Score=170.57  Aligned_cols=118  Identities=22%  Similarity=0.291  Sum_probs=103.0

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .+|...+.||+|+||.||++. ..+++.||+|....      ..+.+|++++++++|||||++++++.     .+...++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~l  160 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFT-----YNKFTCL  160 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeEE
Confidence            468889999999999999998 45789999997542      35789999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+. ++|.+++...  ..+++...+.|+.||++||+|||   +.+||||||||
T Consensus       161 v~e~~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP  210 (391)
T PHA03212        161 ILPRYK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKA  210 (391)
T ss_pred             EEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence            999996 7898888543  46899999999999999999999   88999999997

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.74  E-value=1.8e-17  Score=159.79  Aligned_cols=125  Identities=22%  Similarity=0.308  Sum_probs=106.6

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++... +|+.||+|++....  ....+.+.+|++++++++|+|++++++++.     .+...
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~   75 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL   75 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence            35777789999999999999864 68999999986432  223456889999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++++.|..++..  ...++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        76 ~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p  128 (286)
T cd07847          76 HLVFEYCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKP  128 (286)
T ss_pred             EEEEeccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCh
Confidence            999999999888877643  235999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.74  E-value=1.6e-17  Score=158.75  Aligned_cols=127  Identities=24%  Similarity=0.389  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-----ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-----AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-----~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .+|...+.||+|+||.||++.. .+|..||||.+....     ....+.+.+|++++.+++|+||+++.+++...   ..
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~   78 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME   78 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence            4688889999999999999985 568999999885321     12235788899999999999999999987532   23


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++++||+++++|.+++...  ..+++...++++.+++.||+|||   +.+|+||||||
T Consensus        79 ~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p  134 (265)
T cd06652          79 RTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKG  134 (265)
T ss_pred             ceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence            4678999999999999998643  35889999999999999999999   88999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.74  E-value=2.3e-17  Score=159.13  Aligned_cols=125  Identities=24%  Similarity=0.411  Sum_probs=106.6

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||+|.. .+|+.||||+++...  ....+.+.+|+.++.+++|+||+++++++.     .++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence            466778999999999999985 468999999986432  223467889999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||++ ++|.+++.... ...+++.....++.|+++||+|||   +.+|+||||||
T Consensus        76 ~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p  129 (285)
T cd07861          76 LIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKP  129 (285)
T ss_pred             EEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCH
Confidence            9999998 78988886533 356999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.74  E-value=1.2e-17  Score=165.59  Aligned_cols=119  Identities=24%  Similarity=0.273  Sum_probs=101.9

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||++.. .+++.||||.++...   ....+.+.+|+.++.++ +|+||+++++++.     ..+..++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-----TTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-----eCCEEEEEE
Confidence            4699999999999985 467899999997532   22335688999999988 5999999999886     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus        76 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp  124 (327)
T cd05617          76 EYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKL  124 (327)
T ss_pred             eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            999999999888543  46999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.74  E-value=1.2e-17  Score=165.05  Aligned_cols=119  Identities=24%  Similarity=0.327  Sum_probs=101.9

Q ss_pred             eeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||++... +++.||||.++...   ......+..|.+++..+ +|+||+++++++.     ..+..++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-----~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-----TKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence            46999999999999854 57899999997421   23345678899999888 6999999999887     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus        76 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp  124 (318)
T cd05570          76 EYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKL  124 (318)
T ss_pred             cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCH
Confidence            999999999988643  36999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.74  E-value=8e-18  Score=169.88  Aligned_cols=127  Identities=20%  Similarity=0.267  Sum_probs=111.1

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCcc---chHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAA---GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~---~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ..++|....+||+|+||.||.++ .++|..+|+|++++....   ..+-...|-.+|....+++||+|+..+.     +.
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ-----D~  213 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ-----DK  213 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec-----CC
Confidence            45789999999999999999998 567999999999875432   2345778999999999999999988876     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...||||||+|+|++...|..  ...|+......++.+++-|++-||   +.++|||||||
T Consensus       214 ~~LYLiMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKP  269 (550)
T KOG0605|consen  214 EYLYLIMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKP  269 (550)
T ss_pred             CeeEEEEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCCh
Confidence            788999999999999999954  457899988999999999999999   99999999998

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.74  E-value=2e-17  Score=160.66  Aligned_cols=126  Identities=27%  Similarity=0.358  Sum_probs=109.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||+|+. .+++.|++|.+........+.+.+|++++++++|+|++++.+.+.     .++..++
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   86 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLWI   86 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEEE
Confidence            3466678899999999999985 458999999997655555678999999999999999999999986     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|..++.... ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        87 v~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp  138 (292)
T cd06644          87 MIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKA  138 (292)
T ss_pred             EEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCc
Confidence            999999999998876533 45999999999999999999999   89999999997

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=2.2e-17  Score=162.16  Aligned_cols=127  Identities=25%  Similarity=0.308  Sum_probs=110.6

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCcc---chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAA---GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~---~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++... +++.||+|.+......   ..+.+..|++++.+++|+||+++++.+.     ++..
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~   75 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-----TETY   75 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-----cCCE
Confidence            35778899999999999999854 5899999999753322   3457889999999999999999999986     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++.......+++.....++.|+++||+|||   ..+++||||||
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  131 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKP  131 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCh
Confidence            899999999999999987655567999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.74  E-value=2.2e-17  Score=159.43  Aligned_cols=120  Identities=24%  Similarity=0.355  Sum_probs=103.6

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|...++||+|+||.||++. ..+++.||+|.+... .....++|.+|++++.+++|+||+++++++.     ..+..++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~l   76 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-----VENRISI   76 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----ECCEEEE
Confidence            46667899999999999998 457899999998643 2334467999999999999999999999997     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|..+.      .+++.....++.|++.||+|||   +.+|+||||||
T Consensus        77 v~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  123 (279)
T cd06619          77 CTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKP  123 (279)
T ss_pred             EEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCH
Confidence            99999999997653      4788999999999999999999   89999999996

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.74  E-value=2.3e-17  Score=159.45  Aligned_cols=130  Identities=26%  Similarity=0.351  Sum_probs=105.0

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhC---CCCcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASV---RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l---~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +|...+.||+|+||.||++.. .+|+.||+|.++....  .....+.+|++++.++   +|+||+++++++.........
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            366778999999999999984 4689999999874321  2234567788877766   699999999988643322345


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||++ ++|.+++.......+++.....++.|++.||+|||   +.+|+||||||
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp  136 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKP  136 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            6899999998 58999887655556999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.74  E-value=1.5e-17  Score=160.41  Aligned_cols=125  Identities=28%  Similarity=0.419  Sum_probs=107.9

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||+++. .+|+.||||+++...  ......+.+|++++++++|+||+++++++.     +++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----cCCcEE
Confidence            477789999999999999985 468999999986432  222357899999999999999999999986     556789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ ++|.+++.......+++.....++.|+++||+|||   ..+++||||||
T Consensus        76 ~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p  128 (284)
T cd07860          76 LVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKP  128 (284)
T ss_pred             EEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            9999996 68999987655567999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.74  E-value=1.9e-17  Score=158.98  Aligned_cols=121  Identities=31%  Similarity=0.530  Sum_probs=101.6

Q ss_pred             eeecccCcccEEeeecC-CCC--eeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLLP-DGS--EVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~-~g~--~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ++||+|+||.||+|... +|.  .+|+|.++... ....+.|.+|++++.++ +|+||+++++++.     +.+..++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-----~~~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRGYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe-----cCCCceEEE
Confidence            36899999999999864 343  47889887432 33456789999999999 7999999999987     455679999


Q ss_pred             ecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++....              ...++|.++..++.|++.||+|||   +.+++||||||
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp  140 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAA  140 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccc
Confidence            9999999999996532              134899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.74  E-value=1.7e-17  Score=163.26  Aligned_cols=127  Identities=25%  Similarity=0.408  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeec--------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL--------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l--------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ++|...+.||+|+||.||+++.        .....||+|.++... .....++.+|++++.++ +|+||+++++++.   
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---   88 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT---   88 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc---
Confidence            4567789999999999999863        134579999987532 23346789999999999 6999999999986   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        .++..++|+||+++|+|.+++....              ...++|...+.++.|++.||.|||   +.+|+||||||
T Consensus        89 --~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp  162 (314)
T cd05099          89 --QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAA  162 (314)
T ss_pred             --cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccc
Confidence              4567899999999999999996532              235899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.74  E-value=2.5e-17  Score=157.64  Aligned_cols=127  Identities=27%  Similarity=0.429  Sum_probs=107.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-----ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-----AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-----~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .+|...+.||+|+||.||++.. .++..||+|++....     ....+.+.+|++++++++|+||+++.+++...   .+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~   78 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE   78 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence            4688889999999999999985 468999999886322     12235688999999999999999999987632   24


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++++||+++++|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        79 ~~~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p  134 (266)
T cd06651          79 KTLTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKG  134 (266)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCH
Confidence            5678999999999999999643  35899999999999999999999   88999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.74  E-value=1.8e-17  Score=161.96  Aligned_cols=124  Identities=23%  Similarity=0.427  Sum_probs=109.9

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .+|...+.||+|+||.||+|. ..+|+.||+|.+........+.+.+|+++++.++|+|++++++++.     .++..++
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l   93 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFV   93 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEE
Confidence            457788999999999999998 4678999999997544445578899999999999999999999987     5668899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+++++|.+++..   ..++|.++..++.++++||+|||   +.+|+||||||
T Consensus        94 v~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p  143 (296)
T cd06655          94 VMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKS  143 (296)
T ss_pred             EEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            9999999999998853   35899999999999999999999   89999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.74  E-value=2.3e-17  Score=156.59  Aligned_cols=124  Identities=29%  Similarity=0.491  Sum_probs=107.8

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +|...+.||+|+||.||++...++..+|+|.++... ....+|.+|++++.+++|+|++++++++.     .....++|+
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~   78 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT-----ERSPICLVF   78 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEc-----cCCceEEEE
Confidence            466678899999999999987778899999987532 23457999999999999999999999986     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++|.+++.... ..++|.....++.+++.||+|||   +.+++||||||
T Consensus        79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p  128 (256)
T cd05112          79 EFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAA  128 (256)
T ss_pred             EcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccc
Confidence            9999999999986532 45899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.74  E-value=1.8e-17  Score=161.52  Aligned_cols=127  Identities=20%  Similarity=0.372  Sum_probs=106.5

Q ss_pred             cCcccceeecccCcccEEeeecC-----------------CCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-----------------DGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVAL  352 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-----------------~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l  352 (425)
                      ++|...+.||+|+||.||++...                 ++..||+|.++.. .......|.+|++++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            45777899999999999997521                 2457999999753 23345689999999999999999999


Q ss_pred             eeEEeeccccCCceEEEEEecCCCCCHHHHHhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 048791          353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDI  423 (425)
Q Consensus       353 ~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~---------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDL  423 (425)
                      ++++.     .++..++||||+++|+|.+++....         ...++|.+...++.|++.||+|||   +.+|+||||
T Consensus        85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl  156 (296)
T cd05095          85 LAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDL  156 (296)
T ss_pred             EEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccC
Confidence            99987     4566899999999999999996532         124889999999999999999999   889999999


Q ss_pred             CC
Q 048791          424 KA  425 (425)
Q Consensus       424 Kp  425 (425)
                      ||
T Consensus       157 kp  158 (296)
T cd05095         157 AT  158 (296)
T ss_pred             Ch
Confidence            97

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.74  E-value=2.7e-17  Score=155.96  Aligned_cols=127  Identities=25%  Similarity=0.393  Sum_probs=107.7

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|++|.||++.. .+++.||+|++....  ....+.+.+|++++++++|+|++++.+.+..    .....+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~   76 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY   76 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence            366778999999999999984 457899999986432  2334678999999999999999999887642    234578


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|||+++++|.+++.......+++.++..++.+++.||+|||   +.+|+||||||
T Consensus        77 lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p  130 (257)
T cd08223          77 IVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKT  130 (257)
T ss_pred             EEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCc
Confidence            9999999999999997655556999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=2.1e-17  Score=157.25  Aligned_cols=125  Identities=27%  Similarity=0.438  Sum_probs=108.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-----cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-----AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-----~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|++|.||++.. .+++.||+|.+.....     ...+.+.+|++++.+++|+||+++++++.     ++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-----DD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-----cC
Confidence            5788899999999999999984 5689999999864321     12357889999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++|+||+++++|.+++...  ..+++.....++.+++.||+|||   +.+|+||||||
T Consensus        77 ~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p  132 (263)
T cd06625          77 ETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKG  132 (263)
T ss_pred             CeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            6889999999999999998643  35889999999999999999999   89999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.73  E-value=1.6e-17  Score=164.08  Aligned_cols=119  Identities=22%  Similarity=0.283  Sum_probs=100.6

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||++.. .+|+.||||.++...   ....+.+..|..++... +|+||+++++++.     +.+..++||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ-----TKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE-----eCCEEEEEE
Confidence            4699999999999985 468899999997421   22335667788888765 8999999999986     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        76 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp  124 (316)
T cd05620          76 EFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKL  124 (316)
T ss_pred             CCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCH
Confidence            999999999998643  46899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.73  E-value=1.8e-17  Score=157.91  Aligned_cols=121  Identities=25%  Similarity=0.438  Sum_probs=101.0

Q ss_pred             eeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||+|...    ++..||+|++.... ....+.|.+|+.++++++|+|++++++++..    .++..++|+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL   76 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence            46899999999999842    24579999986432 3345688999999999999999999998863    234578999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++... ...+++..++.++.|+++||+|||   +.+|+||||||
T Consensus        77 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~  126 (262)
T cd05058          77 PYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAA  126 (262)
T ss_pred             ecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCc
Confidence            999999999999653 335788889999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.73  E-value=2.3e-17  Score=157.50  Aligned_cols=123  Identities=27%  Similarity=0.445  Sum_probs=105.1

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCcc---------chHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAA---------GDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~---------~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      |.....||+|+||.||+|.. .+++.||+|.+......         ..+.+.+|++++.+++|+||+++.+++.     
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----   76 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL-----   76 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----
Confidence            56678899999999999984 46889999988643221         1256889999999999999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.+..++|+||+++++|.+++...  ..+++.....++.++++||+|||   +.+++||||||
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p  134 (267)
T cd06628          77 DADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKG  134 (267)
T ss_pred             eCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCH
Confidence            456789999999999999999543  46899999999999999999999   88999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.73  E-value=2.2e-17  Score=160.37  Aligned_cols=125  Identities=26%  Similarity=0.360  Sum_probs=108.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+++.||+|.++...   ....+.+.+|++++++++|+||+++++++.     +++.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-----DDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCe
Confidence            3577889999999999999985 468999999986422   223467889999999999999999999986     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++...  ..+++..+..++.|+++||.|||   +.+|+||||||
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p  129 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKP  129 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCH
Confidence            89999999999999999653  46899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.73  E-value=3.1e-17  Score=158.93  Aligned_cols=125  Identities=26%  Similarity=0.388  Sum_probs=106.8

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++|+||+++.+++.     +++..+
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~   79 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-----TKKTLT   79 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-----cCCeEE
Confidence            56788899999999999999854 689999999864322 22346788999999999999999999987     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ ++|.+++.... ..+++.....++.|+++||.|||   +.+|+||||||
T Consensus        80 lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p  131 (291)
T cd07844          80 LVFEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKP  131 (291)
T ss_pred             EEEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCH
Confidence            9999998 59999886543 36899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.73  E-value=3.2e-17  Score=155.05  Aligned_cols=124  Identities=34%  Similarity=0.530  Sum_probs=106.9

Q ss_pred             ccceeecccCcccEEeeecCC-----CCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          294 SRDNIIGRGGYGNVYKGLLPD-----GSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~-----g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ...+.||+|+||.||+++..+     +..||+|.++..... ..+.+..|++++.+++|+||+++++++.     +.+..
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~   76 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEPL   76 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCee
Confidence            345789999999999998643     488999999754433 4578999999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|||+++++|.+++.......++|.++..++.|++.||+|||   +.+++||||||
T Consensus        77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~  131 (258)
T smart00219       77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAA  131 (258)
T ss_pred             EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeeccccc
Confidence            99999999999999997644333999999999999999999999   88999999997

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.73  E-value=3.3e-17  Score=157.90  Aligned_cols=125  Identities=25%  Similarity=0.390  Sum_probs=106.7

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|...+.||+|++|.||+|+. .+|+.||||.++.... .....+.+|++++++++|+||+++++++.     ..+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence            477789999999999999996 4689999999875432 23457788999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||++ |+|.+++.... ...++|.....++.|+++||+|||   +.+|+||||||
T Consensus        76 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p  128 (284)
T cd07836          76 VFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKP  128 (284)
T ss_pred             EEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCH
Confidence            999998 58988886533 346999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.73  E-value=2.5e-17  Score=161.25  Aligned_cols=125  Identities=20%  Similarity=0.251  Sum_probs=108.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+++.||+|.+....   ....+.+.+|++++..++|+||+++++.+.     .++.
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~   75 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-----TKRH   75 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-----cCCE
Confidence            3677889999999999999984 468899999987532   223457889999999999999999999886     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++...  ..+++.....++.++++||+|||   +.+|+||||||
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  129 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKP  129 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCch
Confidence            89999999999999999543  46899999999999999999999   88999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.73  E-value=2.3e-17  Score=160.89  Aligned_cols=124  Identities=24%  Similarity=0.418  Sum_probs=108.9

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++. ..+++.||+|.+........+.+.+|+.++++++|+|++++.+++.     ..+..++
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~l   93 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELWV   93 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEEE
Confidence            567778999999999999998 4578899999986544444577899999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+++++|.+++.+   ..+++..+..++.++++||.|||   +.+++||||||
T Consensus        94 v~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p  143 (293)
T cd06647          94 VMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS  143 (293)
T ss_pred             EEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCH
Confidence            9999999999999854   35899999999999999999999   89999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.73  E-value=1.2e-17  Score=162.84  Aligned_cols=119  Identities=24%  Similarity=0.383  Sum_probs=104.7

Q ss_pred             ceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          296 DNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ...||+|+||.||++.. .++..||||++........+.+.+|+.++++++|+||+++++.+.     .++..++||||+
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~lv~e~~  101 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWVVMEFL  101 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEEEEeCC
Confidence            36699999999999984 468899999987655455667899999999999999999999987     567889999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++|.+++..   ..+++.....++.+|++||+|||   +.+|+||||||
T Consensus       102 ~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp  146 (292)
T cd06658         102 EGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKS  146 (292)
T ss_pred             CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCH
Confidence            99999998843   35899999999999999999999   88999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.73  E-value=2.2e-17  Score=163.99  Aligned_cols=126  Identities=24%  Similarity=0.385  Sum_probs=105.6

Q ss_pred             CcccceeecccCcccEEeeecC--------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP--------DGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQ  361 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~--------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~  361 (425)
                      +|...+.||+|+||.||++...        .+..||+|.++... ....+++.+|++++.++ +|+||+++++++.    
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~----   88 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT----   88 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc----
Confidence            4677899999999999999631        12478999887432 33356899999999999 7999999999987    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +++..++++||+++|+|.+++....              ...++|.+++.++.|+++||+|||   +.+|+||||||
T Consensus        89 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp  162 (334)
T cd05100          89 -QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAA  162 (334)
T ss_pred             -cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeecccccc
Confidence             4567899999999999999996521              235899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.73  E-value=3.5e-17  Score=155.69  Aligned_cols=124  Identities=28%  Similarity=0.418  Sum_probs=108.4

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++.. .+++.|++|.++....  ...+.+.+|++++++++|+||+++++++.     ..+..+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-----HREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----cCCEEE
Confidence            366778999999999999985 4789999999875433  24578999999999999999999999976     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++...  ..+++..+..|+.++++||+|||   +.+|+||||||
T Consensus        76 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~  127 (264)
T cd06626          76 IFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKP  127 (264)
T ss_pred             EEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            999999999999999643  35899999999999999999999   89999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.73  E-value=3.7e-17  Score=157.51  Aligned_cols=124  Identities=24%  Similarity=0.312  Sum_probs=108.0

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||+|.. .+|+.||||++....  ....+.+.+|+.++++++|+||+++++++.     .+...+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCeeE
Confidence            366778999999999999985 478999999997543  233467999999999999999999999987     466789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+ +++|.+++.... ..+++.++..++.||++||+|||   +.+|+||||||
T Consensus        76 ~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  127 (286)
T cd07832          76 LVMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKP  127 (286)
T ss_pred             EEeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCH
Confidence            999999 999999986543 56999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.73  E-value=3e-17  Score=169.80  Aligned_cols=128  Identities=24%  Similarity=0.406  Sum_probs=103.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeecccc---CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL---EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~---~~~  365 (425)
                      .++|...+.||+|+||.||+|.. .+++.||||++....    ....+|+.++++++|+|||++.+++......   ...
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            45788899999999999999985 568999999985422    2345799999999999999999886542210   122


Q ss_pred             eEEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||++ ++|.+++..  .....+++.....++.||++||+|||   +.+||||||||
T Consensus       141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp  198 (440)
T PTZ00036        141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKP  198 (440)
T ss_pred             EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCH
Confidence            4678999998 577777643  23456999999999999999999999   89999999997

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.73  E-value=4e-17  Score=159.43  Aligned_cols=125  Identities=24%  Similarity=0.385  Sum_probs=106.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++.. .+++.||+|.++... ......+.+|+.++++++|+||+++++++.     .++..+
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~~~   80 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSLT   80 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCeEE
Confidence            4577789999999999999985 468899999987432 223456789999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||++ ++|.+++... ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        81 lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp  132 (301)
T cd07873          81 LVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKP  132 (301)
T ss_pred             EEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCH
Confidence            9999997 6999988653 345899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.73  E-value=1.4e-17  Score=160.49  Aligned_cols=122  Identities=28%  Similarity=0.421  Sum_probs=105.3

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |+..+.||+|+||.||+|.. .+++.||+|.++... ....+.+.+|++++++++|+||+++++++.     .++..++|
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv   80 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-----KGTKLWII   80 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-----cCCceEEE
Confidence            44557799999999999984 468899999987432 333467899999999999999999999987     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++++|.+++..   ..+++.....++.|+++||+|||   +.+|+|+||||
T Consensus        81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p  129 (277)
T cd06642          81 MEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLH---SERKIHRDIKA  129 (277)
T ss_pred             EEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCCh
Confidence            999999999998843   46899999999999999999999   89999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.73  E-value=3e-17  Score=155.18  Aligned_cols=121  Identities=34%  Similarity=0.531  Sum_probs=105.6

Q ss_pred             eeecccCcccEEeeecCC----CCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLLPD----GSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~----g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||++...+    +..||||.++..... ..+.+.+|++++.+++|+|++++++++.     .+...++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence            469999999999998643    789999999754333 3578999999999999999999999987     466789999


Q ss_pred             ecCCCCCHHHHHhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASN-------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~-------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++|.+++....       ...++|..+..++.++++||+|||   +.+|+||||||
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p  133 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAA  133 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCc
Confidence            9999999999997631       356999999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.73  E-value=1.4e-17  Score=160.65  Aligned_cols=125  Identities=22%  Similarity=0.334  Sum_probs=104.7

Q ss_pred             cccceeecccCcccEEeeecC------CCCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      |...+.||+|+||.||+|...      +++.||||+++..... ..+.|.+|++++.+++|+||+++++++.     +..
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~   81 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-----KEQ   81 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----CCC
Confidence            445578999999999999842      3578999999754332 2457889999999999999999999987     455


Q ss_pred             eEEEEEecCCCCCHHHHHhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFAS--------------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~--------------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++++||+++++|.+++...              ....+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp  152 (283)
T cd05091          82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLAT  152 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccch
Confidence            689999999999999998531              1235899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.73  E-value=2.3e-17  Score=161.47  Aligned_cols=125  Identities=30%  Similarity=0.581  Sum_probs=104.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCC----eeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGS----EVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~----~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||.||+|.. .+|.    .||+|.+..... ....+|.+|+.++++++|+||++++|+|..      
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------   80 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS------   80 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC------
Confidence            3466778999999999999984 3454    478998865332 233578999999999999999999999852      


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++++||+++|+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        81 ~~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp  137 (303)
T cd05110          81 PTIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAA  137 (303)
T ss_pred             CCceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHh---hcCeecccccc
Confidence            3457999999999999998653 335899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.73  E-value=3e-17  Score=156.19  Aligned_cols=118  Identities=31%  Similarity=0.489  Sum_probs=101.4

Q ss_pred             eeecccCcccEEeeecC--C--CCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLLP--D--GSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~--~--g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||+|...  +  +..+|+|.+..... ...+++.+|+.++++++|+|||++++++.      ++..++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence            46999999999999742  2  36899999875433 34568999999999999999999999874      44679999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..++|..+..++.|++.||+|||   ..+|+||||||
T Consensus        75 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p  123 (257)
T cd05060          75 ELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAA  123 (257)
T ss_pred             EeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCccc
Confidence            999999999999653  36899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.73  E-value=3.8e-17  Score=158.51  Aligned_cols=127  Identities=26%  Similarity=0.360  Sum_probs=107.0

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++++|...+.||+|+||.||+|.. .+|+.||+|.+..... .....+.+|++++++++|+||+++.+++.     .++.
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~   77 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKET   77 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCe
Confidence            456788899999999999999984 5689999999874332 22346789999999999999999999986     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|+||++ +++.+++.... ..+++.....++.|+++||+|||   ..+|+||||||
T Consensus        78 ~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp  131 (291)
T cd07870          78 LTFVFEYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKP  131 (291)
T ss_pred             EEEEEeccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence            899999996 78877775432 45889999999999999999999   88999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.73  E-value=2.8e-17  Score=158.52  Aligned_cols=140  Identities=27%  Similarity=0.401  Sum_probs=116.2

Q ss_pred             cHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeec
Q 048791          282 TFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIAT  359 (425)
Q Consensus       282 ~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~  359 (425)
                      ++.++..+.+.|...+.||+|+||.||+|.. .+++.||+|.+.... ....++..|+.++.++ +|+||+++++++...
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            4556666777888889999999999999985 568899999986432 3345788999999999 699999999998643


Q ss_pred             cc-cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQ-LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~-~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .. ..++..+++|||+++|+|.+++.......+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~  149 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKG  149 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            22 13457899999999999999997655556899999999999999999999   88999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.73  E-value=3.2e-17  Score=155.11  Aligned_cols=120  Identities=32%  Similarity=0.554  Sum_probs=105.3

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMK  375 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~  375 (425)
                      ++||+|+||.||++...+++.||+|.+...... ....|.+|++++++++|+||+++++++.     .....++||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~~   75 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELVP   75 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcCC
Confidence            368999999999999777999999998754332 4568999999999999999999999987     4567899999999


Q ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          376 NGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       376 ~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|.+++.... ..+++.....++.+++.||+|||   +.+|+||||||
T Consensus        76 ~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p  121 (251)
T cd05041          76 GGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAA  121 (251)
T ss_pred             CCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCc
Confidence            999999996533 35899999999999999999999   89999999997

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.73  E-value=1.7e-17  Score=160.01  Aligned_cols=125  Identities=24%  Similarity=0.344  Sum_probs=106.8

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++... +++.||+|++.....  ...+.+.+|++++++++|+||+++++++.     .++..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   75 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR-----RKKRL   75 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc-----cCCeE
Confidence            35777899999999999999964 589999999864322  23457889999999999999999999986     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+++++|.++....  ..++|.....++.||++||+|||   +.+|+||||||
T Consensus        76 ~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p  128 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKP  128 (286)
T ss_pred             EEEEecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence            9999999999998876432  35899999999999999999999   88999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.73  E-value=3e-17  Score=178.03  Aligned_cols=125  Identities=23%  Similarity=0.272  Sum_probs=108.3

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+|... +++.||||+++....   .....+..|++++..++|+||+++++++.     ....
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-----SANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-----ECCE
Confidence            56888899999999999999854 689999999975322   22357889999999999999999998876     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++...  ..+++...+.|+.||+.||+|||   ..+||||||||
T Consensus        79 ~~lVmEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP  132 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKP  132 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccH
Confidence            89999999999999999643  35899999999999999999999   78999999997

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=2.3e-17  Score=159.44  Aligned_cols=127  Identities=20%  Similarity=0.320  Sum_probs=107.3

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|...+.||+|+||.||++... +|..||+|.++.. .......+.+|++++.+++|+||+++++.+.     ..+..++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~l   76 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGAVYM   76 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCeEEE
Confidence            4566788999999999999864 7899999988643 2233467899999999999999999999887     4567899


Q ss_pred             EEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFAS-NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~-~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+++++|.+++... ....+++.....++.++++||.|||+  +.+|+||||||
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p  131 (286)
T cd06622          77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKP  131 (286)
T ss_pred             EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCH
Confidence            99999999999988653 13368999999999999999999992  35899999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=4.6e-17  Score=157.85  Aligned_cols=129  Identities=25%  Similarity=0.303  Sum_probs=109.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|++|.||++.. .+++.+|+|.+.... .....++.+|++++++++|+||+++++++...   ..+..+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~   77 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIG   77 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEE
Confidence            3577789999999999999996 468899999987432 23456799999999999999999999998642   344679


Q ss_pred             EEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++++|.+++..  .....+++.....|+.|+++||+|||   ..+++||||+|
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~  133 (287)
T cd06621          78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKP  133 (287)
T ss_pred             EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            99999999999998754  23456899999999999999999999   89999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.72  E-value=9.1e-18  Score=169.57  Aligned_cols=127  Identities=23%  Similarity=0.296  Sum_probs=107.7

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~  363 (425)
                      ..++|.-++.||+|+|.+||+++ ...++++|||++.+.-   ....+-...|-++|.+| .||.||+|+--+.     +
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ-----D  145 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ-----D  145 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee-----c
Confidence            34567778899999999999998 5679999999986421   12223456788899999 7999999988876     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....|.|+||.+||+|.++|...  +.|+......++.+|..||+|||   +.+||||||||
T Consensus       146 ~~sLYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKP  202 (604)
T KOG0592|consen  146 EESLYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKP  202 (604)
T ss_pred             ccceEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCCh
Confidence            66789999999999999999654  56899999999999999999999   99999999998

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.72  E-value=1.5e-17  Score=159.02  Aligned_cols=121  Identities=31%  Similarity=0.549  Sum_probs=102.3

Q ss_pred             eeecccCcccEEeeecCC-------CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          297 NIIGRGGYGNVYKGLLPD-------GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~-------g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +.||+|+||.||+|+..+       ++.+|||.+.... .....+|.+|++++++++|+||+++++++.     .....+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence            368999999999998532       3579999886432 234568999999999999999999999987     455689


Q ss_pred             EEEecCCCCCHHHHHhcC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFAS-----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~-----~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...     ....++|.+++.++.|+++||+|||   +.+++||||||
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p  134 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAA  134 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence            999999999999999753     2234899999999999999999999   88999999997

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.72  E-value=2.4e-17  Score=172.96  Aligned_cols=136  Identities=17%  Similarity=0.210  Sum_probs=110.7

Q ss_pred             HHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-  362 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-  362 (425)
                      ....++|...+.||+|+||.||++. ..+|+.||||.+...  +......+.+|+.++..++|+|++++...+...... 
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence            3345688899999999999999998 467999999998643  233346788999999999999999988776532211 


Q ss_pred             --CCceEEEEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 --EGHQRIIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 --~~~~~~LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        .....++||||+++|+|.+++...  ....+++.....|+.|++.||.|||   +.+||||||||
T Consensus       108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP  171 (496)
T PTZ00283        108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKS  171 (496)
T ss_pred             cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence              112468999999999999999653  2346899999999999999999999   89999999997

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=3.3e-17  Score=170.19  Aligned_cols=120  Identities=23%  Similarity=0.287  Sum_probs=103.6

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ..+|...+.||+|+||.||++... +++.||||....      ..+.+|++++++++|+|||++++++.     .++..+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~-----~~~~~~  236 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRV-----VGGLTC  236 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEEE
Confidence            446888899999999999999854 578999996432      34678999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+. ++|.+++... ...++|.+++.|+.||++||+|||   ..+||||||||
T Consensus       237 lv~e~~~-~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP  288 (461)
T PHA03211        237 LVLPKYR-SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKT  288 (461)
T ss_pred             EEEEccC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCH
Confidence            9999995 7999888643 346999999999999999999999   88999999997

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=6.2e-17  Score=153.78  Aligned_cols=126  Identities=31%  Similarity=0.410  Sum_probs=110.8

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++.. .+++.+++|.+........+.+.+|++++++++|+||++++++..     .++..++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL-----RRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEE-----eCCEEEE
Confidence            5677889999999999999985 467889999997655445678999999999999999999999886     5667899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||+++++|.+++... ...+++.....++.|++.||+|||   +.+|+||||||
T Consensus        78 ~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p  129 (262)
T cd06613          78 VMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKG  129 (262)
T ss_pred             EEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCCh
Confidence            99999999999988653 246999999999999999999999   88999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.72  E-value=3.4e-17  Score=162.11  Aligned_cols=119  Identities=24%  Similarity=0.338  Sum_probs=97.5

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHH-HHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVE-VIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~-il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||+++. .+++.||+|.+....   ......+..|.. +++.++|+||+++++++.     +.+..++||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-----~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-----TADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-----cCCeEEEEE
Confidence            3699999999999985 467899999986421   122334555544 567889999999999886     566789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..+.+.....++.||++||+|||   +.+|+||||||
T Consensus        76 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp  124 (325)
T cd05602          76 DYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKP  124 (325)
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCH
Confidence            999999999999643  45788888899999999999999   89999999997

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.72  E-value=4.5e-17  Score=156.85  Aligned_cols=126  Identities=24%  Similarity=0.372  Sum_probs=103.4

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHH-HhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEV-IASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~i-l~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++.. .+|+.||+|+++... .....++..|+++ ++..+|+||+++++++.     .++..
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~   75 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV   75 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence            3677889999999999999985 469999999987532 2334566677765 55668999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQP-AIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~-~IiHRDLKp  425 (425)
                      ++++||++ |+|.+++...  ....+++.....++.||+.||+|||   +. +++||||||
T Consensus        76 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp  132 (283)
T cd06617          76 WICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKP  132 (283)
T ss_pred             EEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCH
Confidence            99999997 7888887542  3356999999999999999999999   65 899999997

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.72  E-value=2.2e-17  Score=172.43  Aligned_cols=134  Identities=22%  Similarity=0.300  Sum_probs=103.0

Q ss_pred             HhcCcccceeecccCcccEEeeec-----------------CCCCeeEEeeecCCCccchHH--------------HHHH
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-----------------PDGSEVALKRFKNCSAAGDAT--------------FKHE  337 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-----------------~~g~~VAVK~l~~~~~~~~~~--------------f~~E  337 (425)
                      ..++|...++||+|+||.||+|..                 .+++.||||+++.......++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            367899999999999999999963                 245689999987533222223              3457


Q ss_pred             HHHHhhCCCCcc-----cceeeEEeeccc---cCCceEEEEEecCCCCCHHHHHhcCC----------------------
Q 048791          338 VEVIASVRHVNL-----VALRGYCIATTQ---LEGHQRIIVCDLMKNGSVYDHLFASN----------------------  387 (425)
Q Consensus       338 v~il~~l~H~NI-----V~l~g~~~~~~~---~~~~~~~LV~Ey~~~GsL~~~L~~~~----------------------  387 (425)
                      +.++.+++|.++     ++++|+|.....   .+.+..+|||||+++|+|.++++...                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            778888877665     678888864311   23457899999999999999987421                      


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          388 GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       388 ~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++|..+..|+.|+++||+|||   +.+|+||||||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp  337 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKP  337 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCch
Confidence            123578899999999999999999   88999999997

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.72  E-value=6.7e-17  Score=153.82  Aligned_cols=127  Identities=26%  Similarity=0.409  Sum_probs=110.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+|.. .++..+|+|++.... ......+.+|+++++.++|+|++++.+.+.     .++..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~   75 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW   75 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence            4678889999999999999984 468899999986432 234568999999999999999999999886     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~-~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++..... ..++|.....++.|++.||+|||   +.+|+||||||
T Consensus        76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p  130 (267)
T cd06610          76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKA  130 (267)
T ss_pred             EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            99999999999999976432 56899999999999999999999   89999999996

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.72  E-value=6e-17  Score=153.58  Aligned_cols=131  Identities=19%  Similarity=0.265  Sum_probs=109.3

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++.. .+|+.||+|.++..  .....+.+.+|++++++++|+||+++++++...   .+...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~   77 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR---SNQTLY   77 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---CCCEEE
Confidence            366678899999999999984 57889999998643  233346788999999999999999999987632   345679


Q ss_pred             EEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGA--QPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~--~~~IiHRDLKp  425 (425)
                      ++|||+++++|.+++...  ....+++.....++.++++||+|||..+  ..+|+||||||
T Consensus        78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p  138 (265)
T cd08217          78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKP  138 (265)
T ss_pred             EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCH
Confidence            999999999999998652  2457999999999999999999999654  78999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.72  E-value=3.6e-17  Score=154.85  Aligned_cols=124  Identities=28%  Similarity=0.382  Sum_probs=109.2

Q ss_pred             cCcccceeecccCcccEEeeecCC-CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++...+ ++.+++|.++....  .++|.+|++++++++|+||+++.+++.     .+...++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l   75 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLWI   75 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEEE
Confidence            567778899999999999999654 78999999875322  568999999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||+++++|.+++... ...++|.....++.|+++||.|||   +.+|+||||+|
T Consensus        76 ~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~  127 (256)
T cd06612          76 VMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKA  127 (256)
T ss_pred             EEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCc
Confidence            99999999999998643 356999999999999999999999   88999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.72  E-value=4.3e-17  Score=157.15  Aligned_cols=119  Identities=24%  Similarity=0.338  Sum_probs=102.9

Q ss_pred             ecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||+||++.. .+|+.||+|.+....   ......+.+|++++.+++|+||+++.+.+.     ..+..++|+||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-----TKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-----cCCeEEEEEecC
Confidence            68999999999974 568999999986422   223456788999999999999999999886     456789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++|.+++.......+++..+..++.|+++||.|||   +.+|+||||||
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p  123 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKP  123 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            9999999997655557999999999999999999999   89999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.72  E-value=2.9e-17  Score=165.05  Aligned_cols=121  Identities=23%  Similarity=0.314  Sum_probs=103.4

Q ss_pred             HhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ...+|...+.||+|+||.||+|... ++..||+|.....      ....|+.++++++|+||+++++++.     +++..
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~  132 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLV-----SGAIT  132 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEE-----eCCee
Confidence            3457999999999999999999854 5778999975432      2356999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+. ++|.+++... ...++|..+..|+.||++||.|||   ..+||||||||
T Consensus       133 ~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp  185 (357)
T PHA03209        133 CMVLPHYS-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKT  185 (357)
T ss_pred             EEEEEccC-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            99999995 7899988653 346999999999999999999999   88999999997

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.72  E-value=5.9e-17  Score=153.92  Aligned_cols=124  Identities=30%  Similarity=0.378  Sum_probs=109.9

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|...+.||+|++|.||+++.. +++.|+||++..... ...+.+.+|++.+.+++|+|++++++++.     ..+..++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l   76 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEISI   76 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEEE
Confidence            5777899999999999999865 599999999875433 34578999999999999999999999987     5578899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      |+||+++++|.+++...  ..+++..+..++.|+++||+|||   + .+++||||||
T Consensus        77 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~  128 (264)
T cd06623          77 VLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKP  128 (264)
T ss_pred             EEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCH
Confidence            99999999999999653  56999999999999999999999   8 9999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.72  E-value=2.9e-17  Score=156.24  Aligned_cols=124  Identities=25%  Similarity=0.301  Sum_probs=108.4

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +|...+.||+|+||.||++... +++.||+|.+....   ....+.+.+|++++++++|+||+++++++.     +++..
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-----DEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-----CCCeE
Confidence            4677899999999999999864 58999999996432   234568999999999999999999999886     56788


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+++++|.+++...  ..+++.....++.|+++||.|||   +.+|+|+||||
T Consensus        76 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~  128 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKP  128 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            9999999999999999543  46999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.72  E-value=4.8e-17  Score=157.39  Aligned_cols=127  Identities=26%  Similarity=0.429  Sum_probs=111.7

Q ss_pred             HhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .+++|...+.||+|+||.||++... +++.|++|.++.... ..+.+.+|++++++++|+|++++++++.     ..+..
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~   90 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYL-----VGDEL   90 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEE-----ECCEE
Confidence            4566777788999999999999975 688999999975443 4568899999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+++++|.+++.... ..+++..+..|+.++++||+|||   +.+|+|+||||
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p  144 (286)
T cd06614          91 WVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKS  144 (286)
T ss_pred             EEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCh
Confidence            99999999999999997543 36999999999999999999999   89999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=4.2e-17  Score=155.69  Aligned_cols=134  Identities=32%  Similarity=0.439  Sum_probs=113.5

Q ss_pred             HHhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccc-cCC
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQ-LEG  364 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~-~~~  364 (425)
                      .++++|...+.||+|+||.||++... +++.+++|.+..... ..++|.+|+++++++ +|+||+++++++..... ..+
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            45678999999999999999999964 678999999875432 346799999999999 69999999999975432 235


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++||||+++++|.+++....  ...+++..+..++.|+++||+|||   +.+|+||||+|
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p  141 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKG  141 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCH
Confidence            56899999999999999886532  456999999999999999999999   89999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.72  E-value=5.5e-17  Score=155.43  Aligned_cols=130  Identities=24%  Similarity=0.385  Sum_probs=104.2

Q ss_pred             cccceeecccCcccEEeeecC----CCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      |...+.||+|+||.||+|...    +++.||||.++..  .....+++.+|++++++++|+||+++++++...... ...
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            345678999999999999842    3688999998643  233456789999999999999999999988643211 112


Q ss_pred             eEEEEEecCCCCCHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFAS----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~----~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++++||+++|+|.+++...    ....+++....+++.||+.||+|||   +.+|+||||||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp  141 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAA  141 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccch
Confidence            347899999999999887542    1235899999999999999999999   88999999997

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.72  E-value=5.9e-17  Score=156.20  Aligned_cols=122  Identities=26%  Similarity=0.390  Sum_probs=105.8

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |...+.||+|+||.||+|.. .++..||||.+.... ......|.+|++++.+++|+||+++++++.     +++..++|
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv   80 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLWII   80 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEEEE
Confidence            55668899999999999984 568899999886432 233467889999999999999999999987     56678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++++|.+++..   ..+++.....++.+++.||.|||   +.+|+|+||||
T Consensus        81 ~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p  129 (277)
T cd06641          81 MEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLH---SEKKIHRDIKA  129 (277)
T ss_pred             EEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCH
Confidence            999999999999843   35899999999999999999999   89999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=6.1e-17  Score=154.81  Aligned_cols=127  Identities=28%  Similarity=0.438  Sum_probs=107.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC-----CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-----SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-----~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .+|...+.||+|+||.||++.. .+|+.||+|.+...     .......|.+|++++++++|+||+++++++...   ++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~   78 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE   78 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence            4688889999999999999984 56899999987532     122335788999999999999999999987532   34


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++++||+++++|.+++...  ..+++.....++.+++.||.|||   +.+|+||||||
T Consensus        79 ~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p  134 (264)
T cd06653          79 KKLSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKG  134 (264)
T ss_pred             CEEEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence            5678999999999999998643  35899999999999999999999   88999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.72  E-value=1.9e-17  Score=156.88  Aligned_cols=123  Identities=30%  Similarity=0.438  Sum_probs=105.0

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCccch--HHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGD--ATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~--~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|+||+||++.. .+++.||+|.+........  .....|+.++.+++|+||+++.++..     .....++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQ-----DDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEE-----ESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccc-----ccccccc
Confidence            34568999999999999995 4567899999986543322  23456999999999999999999987     4667899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+++.  ....+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        76 v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp  126 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKP  126 (260)
T ss_dssp             EEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSG
T ss_pred             ccccccccccccccc--ccccccccccccccccccccccccc---ccccccccccc
Confidence            999999999999996  2346899999999999999999999   88999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.72  E-value=7e-17  Score=156.65  Aligned_cols=131  Identities=21%  Similarity=0.292  Sum_probs=106.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||.++....  .....+.+|++++++++ |+||+++++++..........
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3678889999999999999985 4789999998864322  22357889999999995 699999999987433212234


Q ss_pred             EEEEEecCCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASN---GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~---~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++ +|.+++....   ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~  138 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKP  138 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCh
Confidence            7999999985 8988886532   246899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.72  E-value=4.5e-17  Score=161.33  Aligned_cols=121  Identities=29%  Similarity=0.350  Sum_probs=103.2

Q ss_pred             eeeccc--CcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRG--GYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G--~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ..||+|  +||+||++.. .+|+.||||.+....  ....+.+.+|+.+++.++|+||+++++++.     .++..++|+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v~   78 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVIS   78 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEEE
Confidence            346666  8999999985 579999999987432  223467889999999999999999999997     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|++.+++.......+++.....++.|++.||+|||   +.+|+||||||
T Consensus        79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp  129 (328)
T cd08226          79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKA  129 (328)
T ss_pred             ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            9999999999987654456999999999999999999999   89999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.72  E-value=3.2e-17  Score=160.23  Aligned_cols=118  Identities=23%  Similarity=0.353  Sum_probs=104.0

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCC
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMK  375 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~  375 (425)
                      ..||+|+||.||++.. .+++.||+|.+........+.+.+|+.++..++|+||+++++++.     .++..++|+||++
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv~e~~~  101 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVLMEFLQ  101 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEEEecCC
Confidence            5699999999999984 478999999987544444567899999999999999999999987     4667899999999


Q ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          376 NGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       376 ~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|.+++..   ..+++..+..++.|++.||+|||   +.+|+||||||
T Consensus       102 ~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p  145 (297)
T cd06659         102 GGALTDIVSQ---TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKS  145 (297)
T ss_pred             CCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            9999998743   35899999999999999999999   89999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=9.1e-18  Score=164.19  Aligned_cols=122  Identities=22%  Similarity=0.399  Sum_probs=106.0

Q ss_pred             cccceeecccCcccEEeee-cCCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||+|.||+|-++. ...|+.||||.+++..   .++.-...+||++|+.+.||||+.++..+.     ..+...
T Consensus        55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE-----NkdKIv  129 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE-----NKDKIV  129 (668)
T ss_pred             HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc-----CCceEE
Confidence            4445779999999999997 4679999999997643   333456788999999999999999999986     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      |||||..+|.|.||+.  .++.|+......|+.||..|+.|.|   +.+++|||||
T Consensus       130 ivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLK  180 (668)
T KOG0611|consen  130 IVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLK  180 (668)
T ss_pred             EEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHh---hccceecccc
Confidence            9999999999999994  4567999999999999999999999   9999999998

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.72  E-value=4.1e-17  Score=179.54  Aligned_cols=135  Identities=18%  Similarity=0.218  Sum_probs=110.9

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ...++|...+.||+|+||.||++.. .++..||+|.+...  .......|..|+.++.+++|+|||++++++...   ..
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~~   86 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---AN   86 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---CC
Confidence            3456788899999999999999984 46788999998643  223346789999999999999999999987642   34


Q ss_pred             ceEEEEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC----CCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGA----QPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~----~~~IiHRDLKp  425 (425)
                      ...+|||||+++|+|.++|...  ....+++...+.|+.||+.||+|||...    ..+||||||||
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKP  153 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP  153 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcH
Confidence            5689999999999999999652  2346999999999999999999999322    15699999997

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.72  E-value=1.3e-17  Score=154.23  Aligned_cols=135  Identities=25%  Similarity=0.309  Sum_probs=116.7

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.+|+|||.-||.++ +.++..+|+|++.-.+.++.+..++|++..++++|||+++++.++........+..|
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y   99 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY   99 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence            3567888999999999999998 778999999999876667778899999999999999999999998754333566889


Q ss_pred             EEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |++.|...|+|.+++...  +...++..+.+.|+.||++||++|| +..+++.||||||
T Consensus       100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH-~~~~~yAH~DiKP  157 (302)
T KOG2345|consen  100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALH-EKEPPYAHRDIKP  157 (302)
T ss_pred             EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHh-ccCCcccccCCCc
Confidence            999999999999999652  3446999999999999999999999 3345799999998

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.72  E-value=6.3e-17  Score=156.04  Aligned_cols=124  Identities=27%  Similarity=0.377  Sum_probs=106.2

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|++|.||+|.. .+|+.||||++....  ....+.+.+|++++++++|+|++++++++.     +++..++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence            44568899999999999985 479999999987432  222357889999999999999999999987     5678899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||++ ++|.+++.......++|..+..++.|+++||+|||   +.+++||||+|
T Consensus        76 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p  127 (283)
T cd07835          76 VFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKP  127 (283)
T ss_pred             EEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCH
Confidence            999995 79999986644456999999999999999999999   88999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=5e-17  Score=161.18  Aligned_cols=117  Identities=22%  Similarity=0.234  Sum_probs=97.2

Q ss_pred             ecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC---CCCcccceeeEEeeccccCCceEEEEE
Q 048791          299 IGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV---RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       299 IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l---~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ||+|+||.||+++. .+|+.||||++....   ......+..|..++.+.   +|+||+++...+.     +.+..++||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~-----~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ-----TDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe-----cCCeEEEEE
Confidence            79999999999984 468999999986421   11223456677777665   6999999999886     556789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        76 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp  124 (330)
T cd05586          76 DYMSGGELFWHLQK--EGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKP  124 (330)
T ss_pred             cCCCCChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCH
Confidence            99999999999864  346899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.71  E-value=1.4e-17  Score=170.12  Aligned_cols=123  Identities=30%  Similarity=0.527  Sum_probs=106.7

Q ss_pred             cccceeecccCcccEEeeecCC---C--CeeEEeeecC-CCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPD---G--SEVALKRFKN-CSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~---g--~~VAVK~l~~-~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ....++||+|-||.||+|++.+   |  -.||||.-+. ......+.|+.|..+|++++|||||+|+|.|.      ..+
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~------e~P  464 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV------EQP  464 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee------ccc
Confidence            4456789999999999999533   2  3689999885 44555688999999999999999999999995      567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+||||..+-|-|..||.. ++..|+......++.||+.+|+|||   +.++|||||.+
T Consensus       465 ~WivmEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAa  519 (974)
T KOG4257|consen  465 MWIVMELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAA  519 (974)
T ss_pred             eeEEEecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhh
Confidence            8999999999999999965 4456999999999999999999999   99999999964

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.71  E-value=1.1e-16  Score=150.69  Aligned_cols=126  Identities=29%  Similarity=0.463  Sum_probs=109.0

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|++|.||+|... +++.|++|.+.....  ...+.+.+|++++++++|+||+++++.+...   .....+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~   77 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN   77 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence            3677789999999999999965 789999999875432  3457899999999999999999999998732   126789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++....  .++|..+..++.++++||+|||   +.+++||||+|
T Consensus        78 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p  129 (260)
T cd06606          78 IFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKG  129 (260)
T ss_pred             EEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence            9999999999999996543  7999999999999999999999   89999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.71  E-value=7.3e-18  Score=170.61  Aligned_cols=112  Identities=28%  Similarity=0.542  Sum_probs=98.3

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCC
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMK  375 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~  375 (425)
                      .+.||.|+-|.||.|++. ++.||||+++...       ..+|.-|++|+|+||+.+.|.|.     ...-..|||||++
T Consensus       129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCt-----qsPcyCIiMEfCa  195 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCT-----QSPCYCIIMEFCA  195 (904)
T ss_pred             hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeec-----CCceeEEeeeccc
Confidence            467999999999999994 6899999986422       35788899999999999999997     4556789999999


Q ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          376 NGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       376 ~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|-|...|..  ..+++.........+||.||.|||   ...|||||||+
T Consensus       196 ~GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKS  240 (904)
T KOG4721|consen  196 QGQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKS  240 (904)
T ss_pred             cccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCC
Confidence            9999999954  456888888999999999999999   99999999995

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.71  E-value=1.1e-16  Score=157.00  Aligned_cols=121  Identities=24%  Similarity=0.419  Sum_probs=99.1

Q ss_pred             ceeecccCcccEEeeecC---CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          296 DNIIGRGGYGNVYKGLLP---DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      ...||+|+||.||++...   ++..||+|.++...  ....+.+|++++++++|+||+++.+++...   .+...++|+|
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e   80 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFD   80 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEe
Confidence            467999999999999854   45789999986532  234678999999999999999999988642   3456799999


Q ss_pred             cCCCCCHHHHHhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFAS-------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~-------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |++ ++|.+++...       ....+++.....|+.||++||.|||   +.+|+||||||
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp  136 (317)
T cd07867          81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKP  136 (317)
T ss_pred             eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCH
Confidence            997 5777776421       1235899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=7.5e-17  Score=154.92  Aligned_cols=123  Identities=28%  Similarity=0.388  Sum_probs=107.4

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|...+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++|+|++++.+++.     ++...++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~   76 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLWI   76 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEEE
Confidence            466678899999999999985 468999999987433 333467899999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||+++++|.+++...   .+++.....++.|++.||.|||   +.+|+||||||
T Consensus        77 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p  126 (274)
T cd06609          77 IMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKA  126 (274)
T ss_pred             EEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            99999999999998543   6999999999999999999999   89999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.71  E-value=1.2e-16  Score=155.33  Aligned_cols=126  Identities=24%  Similarity=0.357  Sum_probs=106.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|++|.||+|.. .+|+.||+|++....  ....+.+.+|++++++++|+||+++++++.     .+...
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   76 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL   76 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence            4678889999999999999985 478999999986432  223357889999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ ++|.+++.......+++.....++.||+.||+|||   +.+|+||||||
T Consensus        77 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p  130 (294)
T PLN00009         77 YLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKP  130 (294)
T ss_pred             EEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCc
Confidence            99999996 68888886544445788888899999999999999   88999999997

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=8.7e-17  Score=154.55  Aligned_cols=123  Identities=30%  Similarity=0.467  Sum_probs=106.4

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCC-CccchHHHHHHHHHHhhCC---CCcccceeeEEeeccccCCce
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-SAAGDATFKHEVEVIASVR---HVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~---H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .|...+.||+|+||.||+|.. .+++.||||.++.. .....+++.+|+.++++++   |+|++++.+++.     ++..
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~   76 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR   76 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence            356678899999999999995 57899999998643 2333467889999999997   999999999986     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++..   ..++|.....++.++++||.|||   +.+|+||||||
T Consensus        77 ~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p  129 (277)
T cd06917          77 LWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKA  129 (277)
T ss_pred             EEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCH
Confidence            8999999999999999854   36999999999999999999999   89999999996

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.71  E-value=1e-16  Score=157.57  Aligned_cols=121  Identities=22%  Similarity=0.410  Sum_probs=99.1

Q ss_pred             ceeecccCcccEEeeecC---CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          296 DNIIGRGGYGNVYKGLLP---DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      .+.||+|+||.||+|...   +++.||+|.++...  ....+.+|++++++++|+||+++.+++...   .+...++|+|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEe
Confidence            467999999999999853   46789999986432  234678999999999999999999987642   3456799999


Q ss_pred             cCCCCCHHHHHhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFAS-------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~-------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |++ ++|.+++...       ....+++.....|+.||+.||+|||   +.+|+||||||
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp  136 (317)
T cd07868          81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKP  136 (317)
T ss_pred             ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCH
Confidence            997 5888877431       1235899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.71  E-value=9.5e-17  Score=156.23  Aligned_cols=133  Identities=26%  Similarity=0.339  Sum_probs=108.4

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc---
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ---  361 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~---  361 (425)
                      ...++|...+.||+|+||.||+|.. .+|+.||||+++...  ......+.+|++++++++|+|++++++++.....   
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3466788889999999999999996 468999999997432  2233567889999999999999999999864320   


Q ss_pred             --cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 --LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 --~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        .+....++|+||+++ ++.+.+... ...++|.....++.||+.||+|||   +.+|+||||||
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p  144 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKC  144 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence              012368999999985 777777543 346999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.71  E-value=8.2e-17  Score=155.18  Aligned_cols=122  Identities=26%  Similarity=0.395  Sum_probs=106.3

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |...+.||+|+||.||+|.. .+++.||||.++... ......+.+|+.++++++|+||+++++++.     +++..++|
T Consensus         6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv   80 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKLWII   80 (277)
T ss_pred             hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEEEEE
Confidence            55567899999999999985 468899999987432 334567899999999999999999999987     56678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++..   ..+++.+...++.++++||+|||   +.+++|+||||
T Consensus        81 ~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p  129 (277)
T cd06640          81 MEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKA  129 (277)
T ss_pred             EecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCCh
Confidence            999999999999853   35899999999999999999999   89999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.71  E-value=6.6e-17  Score=163.41  Aligned_cols=125  Identities=24%  Similarity=0.393  Sum_probs=109.5

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCcc---chHHHHHHHHHHhhCC-CCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAA---GDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~---~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~  364 (425)
                      ...|...+.||+|.||.||+++.. +|+.+|+|.+++....   ..+.+.+|+.+|.++. |||||.+.+.+.     ..
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e-----~~  108 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFE-----DP  108 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEE-----cC
Confidence            345667789999999999999954 5999999999754432   3358899999999998 999999999998     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++|||++.+|.|.+.+...   .++......++.+|+.++.|||   ..+|+||||||
T Consensus       109 ~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKp  163 (382)
T KOG0032|consen  109 DSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKP  163 (382)
T ss_pred             CeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCH
Confidence            5789999999999999999765   3999999999999999999999   89999999997

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.70  E-value=6e-17  Score=153.56  Aligned_cols=117  Identities=21%  Similarity=0.292  Sum_probs=102.6

Q ss_pred             ecccCcccEEeeecC-CCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLLP-DGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||.||+++.. +|+.+++|.+.....   ...+.+.+|++++.+++|+||+++.+.+.     .+...++|+||+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ-----GKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-----cCcEEEEEEecC
Confidence            689999999999965 489999999875332   34567899999999999999999998876     566789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++|.+++.+..  .+++..+..++.||++||+|||   +.+|+||||+|
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~  121 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKP  121 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCH
Confidence            9999999996533  6899999999999999999999   89999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.70  E-value=8.3e-17  Score=159.98  Aligned_cols=129  Identities=24%  Similarity=0.372  Sum_probs=107.9

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||+|. ..+|+.||||.++... ......+.+|+.++.+++|+||+++++++...........
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            4678889999999999999998 4578999999986432 2334678899999999999999999998765433234568


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||++ ++|.+++..   ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp  134 (336)
T cd07849          84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKP  134 (336)
T ss_pred             EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            99999997 588887743   46999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.7e-16  Score=149.71  Aligned_cols=124  Identities=30%  Similarity=0.480  Sum_probs=108.4

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|++|.||++.. .+++.|++|.+.....  ...+.+.+|++++.+++|+|++++.+++.     .++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence            366778999999999999985 4688999999976443  34468999999999999999999999986     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++||+++++|.+++...  ..++|..+..++.|++.||.|||   +.+|+||||||
T Consensus        76 ~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  127 (254)
T cd06627          76 IILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKA  127 (254)
T ss_pred             EEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCH
Confidence            999999999999998543  56999999999999999999999   89999999996

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.70  E-value=9.8e-17  Score=161.01  Aligned_cols=129  Identities=22%  Similarity=0.312  Sum_probs=105.7

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EG  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~  364 (425)
                      ..++|...+.||+|+||.||++.. .+|+.||||++...  .......+.+|+.++..++|+||+++++++...... +.
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            356788899999999999999984 56899999999642  223346788999999999999999999988643321 22


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++||||++ +++.+.+..    .+++.....++.|+++||+|||   +.+|+||||||
T Consensus        99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp  151 (359)
T cd07876          99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  151 (359)
T ss_pred             ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            45799999997 467666632    4889999999999999999999   89999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.70  E-value=7.2e-17  Score=160.74  Aligned_cols=129  Identities=23%  Similarity=0.329  Sum_probs=105.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+++.||||++....  ....+.+.+|++++.+++|+||+++++++..... ....
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            45688889999999999999984 578899999986432  2234567899999999999999999988753221 1224


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++++|++ +++|.+++..   ..+++.....|+.||++||+|||   +.+|+||||||
T Consensus        94 ~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp  146 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKP  146 (343)
T ss_pred             cEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCh
Confidence            578999988 6899887742   45999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.70  E-value=1.7e-16  Score=153.96  Aligned_cols=122  Identities=22%  Similarity=0.374  Sum_probs=106.9

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      |...+.||+|++|.||++.. .+++.|++|+++.......+.+.+|+.+++.++|+||+++++++.     .++..++|+
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v~   95 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVVM   95 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEEE
Confidence            34457899999999999984 578999999987544445567899999999999999999999886     466789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++|.+++..   ..+++..+..++.+++.||+|||   +.+|+||||||
T Consensus        96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p  143 (285)
T cd06648          96 EFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKS  143 (285)
T ss_pred             eccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCh
Confidence            99999999999865   45899999999999999999999   89999999997

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.70  E-value=1.1e-16  Score=152.44  Aligned_cols=125  Identities=24%  Similarity=0.330  Sum_probs=108.4

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|...+.||+|+||.||++... +++.||+|++.... ....+++.+|++++++++|+||+++.+.+.     ..+..++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~l   76 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDISI   76 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEEE
Confidence            4566688999999999999864 68999999987543 334567999999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      ++||+++++|.+++.... ..+++.....++.|+++||+|||   + .+++||||||
T Consensus        77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~  129 (265)
T cd06605          77 CMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKP  129 (265)
T ss_pred             EEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCH
Confidence            999999999999986533 56899999999999999999999   7 8999999996

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.70  E-value=1e-16  Score=155.67  Aligned_cols=127  Identities=23%  Similarity=0.332  Sum_probs=106.2

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||+|... +++.||+|.++....  .....+.+|++++.+++|+||+++.+++...   +.+..
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~   81 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI   81 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence            45777789999999999999964 688999999974322  2234678899999999999999999998742   23678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ ++|.+.+.... ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        82 ~lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p  134 (293)
T cd07843          82 YMVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKT  134 (293)
T ss_pred             EEEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCH
Confidence            99999997 59998886533 36999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.70  E-value=1.4e-16  Score=154.50  Aligned_cols=124  Identities=24%  Similarity=0.319  Sum_probs=105.2

Q ss_pred             CcccceeecccCcccEEeeec----CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS----AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      +|...+.||+|+||.||++..    .+|..||+|+++...    ....+.+.+|+.++.++ +|+||+++.+++.     
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-----   75 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ-----   75 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence            466778999999999999874    478999999987432    12345788999999999 5999999998876     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+...++|+||+++++|.+++...  ..+++.....++.|+++||.|||   +.+++||||||
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p  133 (290)
T cd05613          76 TDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKL  133 (290)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            456789999999999999999653  45889999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.70  E-value=8.7e-17  Score=155.13  Aligned_cols=124  Identities=22%  Similarity=0.341  Sum_probs=104.8

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++.. .+|+.||+|+++...  ......+.+|++++++++|+||+++++++.     +.+..+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH-----SDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-----cCCceE
Confidence            366678899999999999985 468999999986432  222356888999999999999999999886     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||++ ++|.+++... ...+++.....++.||++||.|||   +.+|+||||||
T Consensus        76 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~  127 (284)
T cd07839          76 LVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKP  127 (284)
T ss_pred             EEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCH
Confidence            9999997 6888887643 345999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.70  E-value=2.6e-16  Score=147.55  Aligned_cols=124  Identities=33%  Similarity=0.501  Sum_probs=109.5

Q ss_pred             cccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      |...+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|+|++++.+++.     .....++++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~~   76 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIVM   76 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEEE
Confidence            566789999999999999964 78999999997654445678999999999999999999999987     456789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++|.+++.... ..++|..+..++.++++||.|||   ..+++||||||
T Consensus        77 e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p  126 (253)
T cd05122          77 EFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKA  126 (253)
T ss_pred             ecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCH
Confidence            9999999999986532 46999999999999999999999   79999999986

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PTZ00284 protein kinase; Provisional

Probab=99.70  E-value=6.9e-17  Score=168.16  Aligned_cols=131  Identities=23%  Similarity=0.338  Sum_probs=104.9

Q ss_pred             HHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCC------cccceeeEE
Q 048791          284 DDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV------NLVALRGYC  356 (425)
Q Consensus       284 ~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~------NIV~l~g~~  356 (425)
                      +++...+++|...+.||+|+||+||++.. .+++.||||+++... ...+++..|++++.+++|.      +++++..++
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            44445678899999999999999999984 468899999997532 2234567788888877654      588888887


Q ss_pred             eeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       357 ~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      ..    +....++|||++ +++|.+++...  ..+++.....|+.||+.||+|||   . .+||||||||
T Consensus       201 ~~----~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP  260 (467)
T PTZ00284        201 QN----ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKP  260 (467)
T ss_pred             Ec----CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCH
Confidence            63    345688999988 67898888643  46999999999999999999999   5 5999999997

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.70  E-value=1.3e-16  Score=156.24  Aligned_cols=125  Identities=30%  Similarity=0.400  Sum_probs=105.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +.|...+.||+|+||.||+|.. .+|+.||+|.+.....   ...+++.+|++++++++|+|++++.+++.     .++.
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-----~~~~   89 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-----REHT   89 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-----eCCe
Confidence            3467778899999999999985 4689999999864322   22357889999999999999999999997     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|+||++ |++.+++... ...++|..+..++.|++.||.|||   ..+|+||||||
T Consensus        90 ~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p  143 (307)
T cd06607          90 AWLVMEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKA  143 (307)
T ss_pred             EEEEHHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCc
Confidence            899999997 6787777542 345999999999999999999999   89999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.69  E-value=2.9e-16  Score=148.12  Aligned_cols=126  Identities=23%  Similarity=0.323  Sum_probs=109.6

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++... +++.|++|++.....  ...+++.+|++++++++|+|++++.+.+.     .++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence            4677789999999999999954 689999999975432  34567899999999999999999999886     457889


Q ss_pred             EEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++....  ...+++.....++.++++||+|||   +.+++|+||||
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~  131 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKP  131 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCCh
Confidence            9999999999999997642  367999999999999999999999   88999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.69  E-value=1.3e-16  Score=159.85  Aligned_cols=129  Identities=21%  Similarity=0.277  Sum_probs=105.8

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EG  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~  364 (425)
                      ..++|...+.||+|+||.||++.. ..++.||||++....  ......+.+|+.+++.++|+||+++++++...... +.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            456788899999999999999984 468899999997432  22345788999999999999999999988643321 23


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++||||++ +++.+++..    .+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        95 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp  147 (355)
T cd07874          95 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  147 (355)
T ss_pred             ceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence            46799999997 567776632    4899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.69  E-value=1.9e-16  Score=156.13  Aligned_cols=123  Identities=29%  Similarity=0.418  Sum_probs=104.3

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||+|+||.||+++. .+|..||+|++.....   .....+.+|++++++++|+|++++++++.     +++..+
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~  101 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-----REHTAW  101 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----eCCeEE
Confidence            56678899999999999984 5689999999864322   22357889999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ |++.+.+... ...++|.++..++.+++.||.|||   +.+|+||||||
T Consensus       102 lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p  153 (317)
T cd06635         102 LVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKA  153 (317)
T ss_pred             EEEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCc
Confidence            9999997 6888877543 345999999999999999999999   89999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.69  E-value=1.6e-16  Score=153.27  Aligned_cols=124  Identities=27%  Similarity=0.327  Sum_probs=105.4

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++... +++.||||+++..  .....+.+.+|++++++++|+||+++++++.     .++..+
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~   76 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-----RKGRLY   76 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-----ECCEEE
Confidence            5778899999999999999854 6889999998643  2233467899999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++++.+..+...  ...+++.....++.+|++||+|||   +.+|+||||||
T Consensus        77 iv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~  128 (288)
T cd07833          77 LVFEYVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKP  128 (288)
T ss_pred             EEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            99999998777665532  345899999999999999999999   88999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.69  E-value=8.2e-17  Score=152.31  Aligned_cols=125  Identities=26%  Similarity=0.336  Sum_probs=108.4

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|.....||.|+||.|...+. .+|..+|+|.++....   ...+-..+|..+|+.++||.++++++-+.     +...
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~-----d~~~  118 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK-----DNSN  118 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-----cCCe
Confidence            4567778999999999999985 4688999999975432   22345678999999999999999999887     5678


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+|||||.++|-|.++|++.  +.++.+....+|.+|+.||+|||   +..||+|||||
T Consensus       119 lymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKP  172 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKP  172 (355)
T ss_pred             EEEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCCh
Confidence            89999999999999999653  46999999999999999999999   99999999998

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.69  E-value=2.4e-16  Score=150.79  Aligned_cols=127  Identities=24%  Similarity=0.355  Sum_probs=103.7

Q ss_pred             CcccceeecccCcccEEeeecCC--CCeeEEeeecCCC----------ccchHHHHHHHHHHhh-CCCCcccceeeEEee
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPD--GSEVALKRFKNCS----------AAGDATFKHEVEVIAS-VRHVNLVALRGYCIA  358 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~--g~~VAVK~l~~~~----------~~~~~~f~~Ev~il~~-l~H~NIV~l~g~~~~  358 (425)
                      +|...+.||+|+||.||++....  ++.+|||.+....          .....++..|+.++.+ ++|+||+++++++. 
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-   79 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL-   79 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence            36667889999999999999654  6889999885321          1123467889988875 79999999999987 


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          +++..++||||+++++|.+++..  .....+++..+.+++.|++.||.|||.  ..+|+||||||
T Consensus        80 ----~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~  142 (269)
T cd08528          80 ----ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTP  142 (269)
T ss_pred             ----cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCH
Confidence                56788999999999999998854  234568999999999999999999992  36799999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.69  E-value=1.6e-16  Score=155.86  Aligned_cols=120  Identities=21%  Similarity=0.163  Sum_probs=101.1

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      +.+|.|+++.||++.. +|+.||||++...  .....+.+.+|++++++++|+||+++++++.     +.+..+++|||+
T Consensus         8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~~~e~~   81 (314)
T cd08216           8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYVVSPLM   81 (314)
T ss_pred             HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEEEEecc
Confidence            3455566666677665 7899999998743  3344568999999999999999999999886     566789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+|.+++.......+++.....++.|+++||+|||   +.+|+||||||
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~  129 (314)
T cd08216          82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKA  129 (314)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCc
Confidence            9999999997654456899999999999999999999   88999999997

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.69  E-value=1.8e-16  Score=154.66  Aligned_cols=118  Identities=23%  Similarity=0.374  Sum_probs=104.3

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCC
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMK  375 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~  375 (425)
                      .+||+|+||.||++.. .+|+.||||++........+.+.+|+.++++++|+|++++++++.     .++..++||||++
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~~  100 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEFLE  100 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEEecCC
Confidence            5699999999999985 578999999986544445667999999999999999999999987     5667899999999


Q ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          376 NGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       376 ~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|.+++..   ..+++.....++.|++.||+|||   +.+|+||||||
T Consensus       101 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p  144 (292)
T cd06657         101 GGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKS  144 (292)
T ss_pred             CCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            9999998743   35899999999999999999999   88999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.68  E-value=2.9e-16  Score=150.97  Aligned_cols=125  Identities=22%  Similarity=0.305  Sum_probs=102.5

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|+||.||++.. .+++.||+|+++... ........+|+.++.++. |+|++++++++...   ..+..++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence            34568899999999999984 578999999987532 222334568999999996 99999999998742   2257899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||++ |++.+++... ...++|.....++.|+++||+|||   +.+|+||||||
T Consensus        78 v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p  128 (282)
T cd07831          78 VFELMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKP  128 (282)
T ss_pred             EEecCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCH
Confidence            999997 6888888653 246999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=5.4e-17  Score=157.28  Aligned_cols=130  Identities=25%  Similarity=0.365  Sum_probs=108.5

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecC--CCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKN--CSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~--~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ...|...+.||+|.||.|.++. -.+|..||||++.+  ......++-.+|+.+|+.++|+||+.+......+.....+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            3445556889999999999998 45789999999973  33344567789999999999999999999887644345678


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|+|+|+|+ -+|...++.  .+.|+....+.+..|+.+||.|+|   +-+|+||||||
T Consensus       101 vYiV~elMe-tDL~~iik~--~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKP  153 (359)
T KOG0660|consen  101 VYLVFELME-TDLHQIIKS--QQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKP  153 (359)
T ss_pred             eEEehhHHh-hHHHHHHHc--CccccHHHHHHHHHHHHHhcchhh---cccccccccch
Confidence            999999995 788888854  235999999999999999999999   99999999998

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.68  E-value=1.5e-16  Score=162.00  Aligned_cols=119  Identities=19%  Similarity=0.239  Sum_probs=102.1

Q ss_pred             cCcccceeecccCcccEEeeec---CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL---PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l---~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .+|...+.||+|+||.||++..   ..+..||||.+...     +.+.+|++++++++|+|||++++++.     ..+..
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~~  161 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYR-----WKSTV  161 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEe-----eCCEE
Confidence            4688889999999999999874   24678999988642     24568999999999999999999886     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+. ++|.+++.  ....++|..++.|+.||++||+|||   +.+||||||||
T Consensus       162 ~lv~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp  213 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKT  213 (392)
T ss_pred             EEEehhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence            99999996 78988883  3456999999999999999999999   89999999997

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.68  E-value=3.6e-16  Score=153.01  Aligned_cols=126  Identities=25%  Similarity=0.441  Sum_probs=103.8

Q ss_pred             cccceeecccCcccEEeeecC---CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP---DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      |...+.||+|+||.||+|...   +++.||+|.+....   ....+.+.+|++++.+++|+||+++++++...   ++..
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~   78 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADKS   78 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCce
Confidence            666788999999999999953   57899999997632   23345778999999999999999999999742   2367


Q ss_pred             EEEEEecCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFAS---NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~---~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++ ++.+++...   ....+++.....|+.||++||.|||   +.+|+||||||
T Consensus        79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp  136 (316)
T cd07842          79 VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKP  136 (316)
T ss_pred             EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCH
Confidence            8999999984 677766432   2236899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.68  E-value=1.1e-16  Score=157.41  Aligned_cols=126  Identities=22%  Similarity=0.217  Sum_probs=110.1

Q ss_pred             CcccceeecccCcccEEeeecCC-CCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .|...+.||+|.-|+||.+++.+ +..+|+|++.+..   .+.......|-+||+.++||-++.|++.+.     ..+..
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-----t~~~~  152 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-----TDKYS  152 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-----cccee
Confidence            34555789999999999999754 5899999997643   233456778999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||||++|+|...++....+.++......+|.+|.-||+|||   -.+||.|||||
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKP  207 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKP  207 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCc
Confidence            99999999999999998888888999999999999999999999   99999999998

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.68  E-value=1.5e-16  Score=159.93  Aligned_cols=121  Identities=23%  Similarity=0.453  Sum_probs=106.7

Q ss_pred             ceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          296 DNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      +++||.|.||+||-|+. .+|+.||||.+.+.  ..+++..+.+|+.+|.+++||.||.|.--|.     ..+..++|||
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~E-----T~ervFVVME  643 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFE-----TPERVFVVME  643 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeec-----CCceEEEEeh
Confidence            57899999999999985 57999999999753  2445678999999999999999999987776     4567899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      -+ +|++.+++.+.++..|+......++.||..||.|||   .++|+|+||||
T Consensus       644 Kl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKP  692 (888)
T KOG4236|consen  644 KL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKP  692 (888)
T ss_pred             hh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCc
Confidence            99 588888888877888999999999999999999999   89999999998

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.68  E-value=3.2e-16  Score=156.45  Aligned_cols=130  Identities=24%  Similarity=0.346  Sum_probs=106.9

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC-C
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE-G  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~-~  364 (425)
                      ..++|...+.||+|+||.||++. ..+|..||||++....  ....+.+.+|++++++++|+||+++.+++....... .
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            35678888999999999999998 4578999999986422  223356889999999999999999999886433211 2


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++||||+ +++|.+++..   ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp  146 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKP  146 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            3568999999 6799888743   35899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.68  E-value=3.6e-16  Score=153.22  Aligned_cols=128  Identities=27%  Similarity=0.393  Sum_probs=106.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||+|.. .+|+.||+|+++....  .....+.+|+.++.+++|+|++++.+++...   ..+.
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~   82 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLDS   82 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCCe
Confidence            45788889999999999999985 4689999999864322  2234567899999999999999999998632   2346


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||++ ++|.+++... ...++|.++..++.|+++||+|||   +.+|+||||||
T Consensus        83 ~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  136 (309)
T cd07845          83 IFLVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKV  136 (309)
T ss_pred             EEEEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            799999997 5888888543 356999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.68  E-value=2.9e-16  Score=157.88  Aligned_cols=128  Identities=22%  Similarity=0.286  Sum_probs=105.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      .++|...+.||+|+||.||++.. ..++.||||++...  .......+.+|+.+++.++|+||+++++++...... +..
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            56788899999999999999984 46889999999742  223346788999999999999999999987643221 234


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||++ ++|.+++..    .+++..+..++.|+++||+|||   +.+|+||||||
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp  154 (364)
T cd07875         103 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  154 (364)
T ss_pred             eEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCH
Confidence            6799999997 577777732    4889999999999999999999   89999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.68  E-value=2e-16  Score=157.23  Aligned_cols=126  Identities=24%  Similarity=0.350  Sum_probs=105.7

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCC--CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC--SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||+|... +|+.||||++...  .......+.+|+.++.++ +|+||+++++++...   ++.
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~~~   82 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---NDK   82 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---CCc
Confidence            456777889999999999999854 6889999988542  223345678899999999 999999999988632   244


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||++ ++|.+++...   .++|..+..++.||+.||+|||   +.+|+||||||
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p  135 (337)
T cd07852          83 DIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKP  135 (337)
T ss_pred             eEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            6799999997 6999888543   6899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.68  E-value=2.5e-16  Score=156.44  Aligned_cols=130  Identities=22%  Similarity=0.341  Sum_probs=108.9

Q ss_pred             HHHHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      ++..++++|...+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|++++.+++|+||+++.+++..   
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---   80 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS---   80 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec---
Confidence            445578889999999999999999998 457899999988532  22234678899999999999999999998863   


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       .+...++|+||+. ++|.+++..   ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        81 -~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p  136 (328)
T cd07856          81 -PLEDIYFVTELLG-TDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKP  136 (328)
T ss_pred             -CCCcEEEEeehhc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence             2456789999994 689888743   35889999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.68  E-value=3.5e-16  Score=156.29  Aligned_cols=136  Identities=24%  Similarity=0.364  Sum_probs=110.8

Q ss_pred             HHHHHHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeec
Q 048791          283 FDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIAT  359 (425)
Q Consensus       283 ~~ei~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~  359 (425)
                      ..++...+++|...+.||+|+||.||++. ..+|+.||||+++..  .....+.+.+|++++.+++|+||+++.+++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            35566678899999999999999999998 457899999998742  222345788999999999999999999988643


Q ss_pred             ccc-CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQL-EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~-~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ... .....++++|++ +++|.+++..   ..++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp  148 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKP  148 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCh
Confidence            221 223467888876 7899888743   35999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.68  E-value=3.1e-16  Score=149.43  Aligned_cols=117  Identities=20%  Similarity=0.236  Sum_probs=101.9

Q ss_pred             ecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||.||++... +++.||+|.+....   ....+.+.+|+.++++++|+||+++++.+.     +++..++|+||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence            699999999999964 58999999986432   223467999999999999999999999886     556789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++|.+++...  ..+++..+..++.|+++||.|||   +.+++|+||||
T Consensus        76 ~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~  121 (262)
T cd05572          76 LGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKP  121 (262)
T ss_pred             CCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCH
Confidence            999999999653  35899999999999999999999   89999999986

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.68  E-value=1.7e-16  Score=152.04  Aligned_cols=125  Identities=23%  Similarity=0.282  Sum_probs=108.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||++.. .+|+.||+|.+...   .....+.+.+|++++.+++ |+||+++++++.     .++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~   75 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-----DEE   75 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc-----CCc
Confidence            3577788999999999999985 47999999998642   2233467889999999998 999999999886     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++...  ..++|.....|+.|++.||+|||   +.+++|+||||
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~  130 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKP  130 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCH
Confidence            789999999999999999653  36999999999999999999999   88999999986

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.68  E-value=2.7e-16  Score=148.74  Aligned_cols=126  Identities=28%  Similarity=0.404  Sum_probs=108.1

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||+++ ..+++.+|+|.+....  .....++.+|++++++++|+||+++.+++.     ++...+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence            46677899999999999997 4578899999987432  233457889999999999999999998886     457889


Q ss_pred             EEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+++++|.+++...  ....+++.....++.++++||+|||   +.+++||||||
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~  131 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKS  131 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCc
Confidence            999999999999998652  2356899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.67  E-value=2.2e-16  Score=156.80  Aligned_cols=128  Identities=23%  Similarity=0.375  Sum_probs=107.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++.. .+|+.||+|++....  ......+.+|+.++.+++|+||+++.+++..... .....
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~   83 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA-DFKDV   83 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCC-CCceE
Confidence            6788889999999999999984 569999999987532  2334577889999999999999999998764332 34578


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+. |+|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        84 ~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp  135 (334)
T cd07855          84 YVVMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKP  135 (334)
T ss_pred             EEEEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            99999996 689888854  345999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.67  E-value=4.2e-16  Score=149.89  Aligned_cols=125  Identities=28%  Similarity=0.394  Sum_probs=105.0

Q ss_pred             cccceeecccCcccEEeeecC-CCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|+||.||+|... +|+.+|+|++....  ......+.+|++++.+++|+|++++++++...   +++..++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence            445688999999999999854 58999999997542  22345788999999999999999999998732   1367899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||++ ++|.+++.... ..+++..+..++.+|++||+|||   ..+++|+||||
T Consensus        78 v~e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p  128 (287)
T cd07840          78 VFEYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKG  128 (287)
T ss_pred             Eecccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcH
Confidence            999998 58988885532 46999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.67  E-value=2.3e-16  Score=151.87  Aligned_cols=124  Identities=27%  Similarity=0.425  Sum_probs=105.1

Q ss_pred             cccceeecccCcccEEeeecC-CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA-AGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|+||.||+|+.. +++.|+||++..... .......+|+..+.+++ |+|++++++++.     .++..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcEEE
Confidence            445688999999999999965 578999999875322 22334567999999999 999999999987     4667899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+ +|+|.+++.......++|.++..++.|+++||.|||   +.+|+|+||||
T Consensus        76 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~  127 (283)
T cd07830          76 VFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKP  127 (283)
T ss_pred             EEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence            99999 899999987654457899999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.67  E-value=3.7e-16  Score=151.23  Aligned_cols=118  Identities=25%  Similarity=0.288  Sum_probs=95.5

Q ss_pred             eecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHh---hCCCCcccceeeEEeeccccCCceEEEE
Q 048791          298 IIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIA---SVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~---~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      +||+|+||.||++.. .+|+.+|||.+....   ......+.+|..++.   ..+|+|++++.+++.     .++..++|
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI   75 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence            489999999999985 568999999886432   122234455554444   347999999988886     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++...  ..++|.....|+.|++.||+|||   +.+|+||||||
T Consensus        76 ~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp  125 (279)
T cd05633          76 LDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKP  125 (279)
T ss_pred             EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCH
Confidence            9999999999998643  46999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.67  E-value=5.2e-16  Score=151.27  Aligned_cols=131  Identities=23%  Similarity=0.320  Sum_probs=106.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc---C
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL---E  363 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~---~  363 (425)
                      .++|...+.||+|+||.||++.. .+++.||||.+....  ......+.+|++++++++|+||++++++|......   .
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            35688889999999999999985 468999999986432  22234567899999999999999999998753211   2


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....++||||++ ++|.+++... ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        91 ~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p  147 (310)
T cd07865          91 KGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKA  147 (310)
T ss_pred             CceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            345699999997 5888887543 236899999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=4.6e-17  Score=168.17  Aligned_cols=122  Identities=25%  Similarity=0.400  Sum_probs=106.3

Q ss_pred             cceeecccCcccEEeeecC--CCC--eeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          295 RDNIIGRGGYGNVYKGLLP--DGS--EVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l~--~g~--~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ..++||+|.||.|++|.+.  .|+  .||||.++..... ...+|++|+.+|-+|+|+|+++|+|...      +...++
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl------~qp~mM  187 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVL------DQPAMM  187 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeec------cchhhH
Confidence            3478999999999999864  343  6899999865433 5679999999999999999999999986      356789


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+|+.+.|||.+-|++..+..|--.....++.|||.||.||.   .+++|||||.+
T Consensus       188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAA  240 (1039)
T KOG0199|consen  188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAA  240 (1039)
T ss_pred             HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhh
Confidence            999999999999998866667888889999999999999999   99999999964

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.67  E-value=2.8e-17  Score=155.57  Aligned_cols=122  Identities=27%  Similarity=0.367  Sum_probs=107.5

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      |....+||+|+||.|||+.. ..|+.||||.+...  .+..+..+|+.+|.+.+.+++|+++|.+.     .....++||
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYF-----K~sDLWIVM  107 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYF-----KHSDLWIVM  107 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhc-----cCCceEeeh
Confidence            56668899999999999985 46999999999743  33568999999999999999999999886     455679999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||-.||+.+.++- ++++|.....-.|..+..+||+|||   ..+-||||||+
T Consensus       108 EYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKA  157 (502)
T KOG0574|consen  108 EYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKA  157 (502)
T ss_pred             hhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhccc
Confidence            99999999999865 4567999999999999999999999   89999999996

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.67  E-value=3.4e-16  Score=156.18  Aligned_cols=128  Identities=22%  Similarity=0.267  Sum_probs=106.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccc--------
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ--------  361 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~--------  361 (425)
                      .+|...+.||+|+||.||+|.. .+|+.||+|++........+.+.+|++++++++|+||+++++++.....        
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            5688889999999999999984 5689999999876555556778999999999999999999987653211        


Q ss_pred             -cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 -LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 -~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       .+....++|+||++ ++|.+++..   ..+++.....++.||++||.|||   +.+|+||||||
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp  142 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKP  142 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence             01235789999997 689888743   35899999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.67  E-value=4.4e-16  Score=150.81  Aligned_cols=124  Identities=26%  Similarity=0.348  Sum_probs=104.5

Q ss_pred             CcccceeecccCcccEEeeec----CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS----AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      +|...+.||+|+||.||+++.    .+++.||||.++...    ....+.+.+|++++.++ +|+||+++++.+.     
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~-----   75 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ-----   75 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence            366678999999999999873    367899999987422    12335688999999999 5999999998876     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+...++||||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+++||||||
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p  133 (288)
T cd05583          76 TDTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKL  133 (288)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            456789999999999999998643  46899999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.67  E-value=4e-16  Score=155.26  Aligned_cols=130  Identities=24%  Similarity=0.355  Sum_probs=107.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.++..  .......+.+|+.++.+++|+||+++.+++..........
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            35688889999999999999984 57899999998742  2233456788999999999999999999876432212245


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|+||+. ++|.+++..  ...+++.....++.|+++||.|||   +.+|+||||||
T Consensus        84 ~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp  136 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKP  136 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence            799999996 789888853  346999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.67  E-value=8.7e-17  Score=142.46  Aligned_cols=124  Identities=24%  Similarity=0.383  Sum_probs=103.1

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCC-ccc-hHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS-AAG-DATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~-~~~-~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...++||+|.||+|||++ .++++.||+|++.-.+ ..+ ....++|+-++++++|+|||+++....     .++..-
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh-----sdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc-----cCceeE
Confidence            34556789999999999998 5678999999987422 222 357899999999999999999998865     345678


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+||+. .+|..|..+ -.+.++......++.|+.+||.|.|   +.++.|||+||
T Consensus        78 lvfe~cd-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkp  129 (292)
T KOG0662|consen   78 LVFEFCD-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKP  129 (292)
T ss_pred             EeHHHhh-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCc
Confidence            9999996 678777643 4467999999999999999999999   99999999998

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.66  E-value=9.6e-16  Score=147.41  Aligned_cols=126  Identities=22%  Similarity=0.213  Sum_probs=98.3

Q ss_pred             HHHHHhcCcccceee--cccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          285 DIKKATRNFSRDNII--GRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       285 ei~~at~~f~~~~~I--G~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ++....++|...+.+  |+|+||.||++.. .++..+|+|.+.......     .|+.....+ +|+|++++++++.   
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~---   79 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVT---   79 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEe---
Confidence            334444555555555  9999999999984 568899999986432111     122222222 6999999999987   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        ..+..++||||+++|+|.+++...  ..++|.....++.|+++||+|||   +.+|+||||||
T Consensus        80 --~~~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  137 (267)
T PHA03390         80 --TLKGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKL  137 (267)
T ss_pred             --cCCeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCH
Confidence              456789999999999999999653  37999999999999999999999   88999999997

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.66  E-value=3e-16  Score=149.38  Aligned_cols=125  Identities=22%  Similarity=0.320  Sum_probs=102.0

Q ss_pred             cccceeecccCcccEEeeecC-CCCeeEEeeecCC-----CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC-----SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~-----~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      |...+.||+|+||.||++... .+..+++|.++..     ......++..|+.++++++|+||+++++++.     +...
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   76 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-----ERDA   76 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh-----cCCc
Confidence            566788999999999999843 3455666665431     1222346778999999999999999999886     4556


Q ss_pred             EEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++..  .....++|..++.++.|+++||.|||   +.+++||||||
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~  134 (260)
T cd08222          77 FCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKA  134 (260)
T ss_pred             eEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCCh
Confidence            8999999999999998864  23456999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.66  E-value=4.7e-16  Score=154.25  Aligned_cols=120  Identities=26%  Similarity=0.367  Sum_probs=101.2

Q ss_pred             cceeecccCcccEEeeec-CCCCeeEEeeecCCCccc--------------hHHHHHHHHHHhhCCCCcccceeeEEeec
Q 048791          295 RDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAG--------------DATFKHEVEVIASVRHVNLVALRGYCIAT  359 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~--------------~~~f~~Ev~il~~l~H~NIV~l~g~~~~~  359 (425)
                      ..+.||+|+||.||++.. .+++.||||.++......              ...+.+|++++.+++|+||+++++++.  
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--   90 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYV--   90 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEe--
Confidence            347799999999999984 478999999986432211              125789999999999999999999987  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         .++..++||||++ |+|.+++..  ...+++.....++.|+++||+|||   +.+|+||||||
T Consensus        91 ---~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~  147 (335)
T PTZ00024         91 ---EGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSP  147 (335)
T ss_pred             ---cCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccH
Confidence               4567899999997 799998853  345899999999999999999999   89999999986

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.7e-16  Score=163.76  Aligned_cols=120  Identities=26%  Similarity=0.371  Sum_probs=102.9

Q ss_pred             ceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          296 DNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      .-+||+|.||+||-|+ +.+...+|||.+...+.....-+..||.+-++++|+|||+.+|.|.     +++..-|.||-.
T Consensus       580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~s-----enGf~kIFMEqV  654 (1226)
T KOG4279|consen  580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVS-----ENGFFKIFMEQV  654 (1226)
T ss_pred             eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccC-----CCCeEEEEeecC
Confidence            3579999999999998 4556689999998666555567788999999999999999999987     677888999999


Q ss_pred             CCCCHHHHHhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          375 KNGSVYDHLFASNGPKL--SWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L--~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      |+|||.+.|+.+ -++|  .+.+.-.+.+||.+||.|||   +..|||||||
T Consensus       655 PGGSLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIK  702 (1226)
T KOG4279|consen  655 PGGSLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIK  702 (1226)
T ss_pred             CCCcHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhh---hcceeecccc
Confidence            999999999764 2334  66667778999999999999   9999999998

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.66  E-value=9.3e-16  Score=147.67  Aligned_cols=129  Identities=25%  Similarity=0.340  Sum_probs=103.5

Q ss_pred             cccceeecccCcccEEeeecC-CCCeeEEeeecCCCc--cchHHHHHHHHHHhhC---CCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA--AGDATFKHEVEVIASV---RHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l---~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      |...+.||+|+||.||+++.. +++.||||+++....  .....+.+|++++.++   +|+|++++.+++..........
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            456788999999999999965 589999999973221  2234677888877766   5999999999997543222234


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+++|||++ ++|.+++.......++|..+..++.|+++||.|||   +.+|+||||||
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~  135 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKP  135 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCh
Confidence            899999997 58999886644446999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=2.9e-17  Score=166.89  Aligned_cols=123  Identities=31%  Similarity=0.437  Sum_probs=103.5

Q ss_pred             cccceeecccCcccEEeee-cCCCCeeEEeeecCCCccc---hHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAG---DATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~---~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||.|+||.||-+. ..+.+.||||++.-...+.   ..++++||..|.+++|||.|.+.||+.     .....+
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-----re~TaW  102 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-----REHTAW  102 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----ccchHH
Confidence            4455779999999999998 4577899999997433332   357899999999999999999999997     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||||- ||-.|.+.- .+++|-.-..-.|..|...||+|||   +.+.||||||+
T Consensus       103 LVMEYCl-GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKA  154 (948)
T KOG0577|consen  103 LVMEYCL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKA  154 (948)
T ss_pred             HHHHHHh-ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccc
Confidence            9999996 777777633 3356888888999999999999999   99999999996

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.66  E-value=1.9e-16  Score=159.43  Aligned_cols=127  Identities=20%  Similarity=0.285  Sum_probs=108.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce-
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ-  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~-  366 (425)
                      ++|...+.+|+|+||.++..+. .+++.+++|++.-.  +....+...+|++++++++|||||.+...++     +++. 
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~-----~~~~~   78 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE-----EDGQL   78 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh-----cCCce
Confidence            4566678899999999987764 35779999998743  2333457789999999999999999998887     4444 


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+|||+|++||++.+.+...+...++..+......|+..|+.|||   +.+|+|||||+
T Consensus        79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~  134 (426)
T KOG0589|consen   79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKC  134 (426)
T ss_pred             EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchh
Confidence            899999999999999998766677999999999999999999999   99999999995

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.66  E-value=2.8e-16  Score=161.93  Aligned_cols=125  Identities=21%  Similarity=0.297  Sum_probs=109.3

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .-|..++.||.|+-|.|..|+ ..+|+.+|||.+....   ........+||.+|+-+.|||+++|+....     +..+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe-----~~~~   86 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE-----NKQH   86 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-----cCce
Confidence            346778899999999999998 5689999999997642   222346788999999999999999999987     5678


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|||.||+++|-|.++|..+  ++|+.....++..||..|+.|.|   ..+|+|||+||
T Consensus        87 lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKp  140 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKP  140 (786)
T ss_pred             EEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCc
Confidence            89999999999999999653  57999999999999999999999   99999999997

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.65  E-value=1.1e-15  Score=152.43  Aligned_cols=127  Identities=22%  Similarity=0.309  Sum_probs=104.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~~  366 (425)
                      ++|...+.||+|+||.||+|.. .+|+.||||+++...  ......+.+|+.++++++|+||+++.+++...... ....
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            6788889999999999999984 578999999986422  22235688999999999999999999998643221 2245


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|+||+. .+|..++.    ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        95 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp  145 (342)
T cd07879          95 FYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKP  145 (342)
T ss_pred             EEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            699999997 47776652    35899999999999999999999   88999999996

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.65  E-value=1e-15  Score=148.01  Aligned_cols=118  Identities=25%  Similarity=0.286  Sum_probs=95.4

Q ss_pred             eecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHH---HhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          298 IIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEV---IASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~i---l~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      +||+|+||.||++.. .+|+.||+|.+....   ......+..|..+   +....|+||+++.+++.     +.+..++|
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v   75 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-----TPDKLSFI   75 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCEEEEE
Confidence            489999999999985 468899999986432   1222334555444   44457999999998886     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++..  ...++|..+..++.|+++||+|||   +.+|+||||||
T Consensus        76 ~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p  125 (278)
T cd05606          76 LDLMNGGDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKP  125 (278)
T ss_pred             EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCH
Confidence            999999999998854  346999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.65  E-value=5.3e-16  Score=159.08  Aligned_cols=127  Identities=22%  Similarity=0.327  Sum_probs=107.7

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .+.+|.....||+|.|++|..+.. .+|..||||.+.+...  .....+.+|+++|..+.|||||+++.+..     ...
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~-----t~~  128 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE-----TEA  128 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee-----ecc
Confidence            356788889999999999999984 4699999999976432  22345889999999999999999999987     356


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..|+||||..+|.+.+||....  .+.......+..|+.++++|+|   +..|||||||+
T Consensus       129 ~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~  183 (596)
T KOG0586|consen  129 TLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKA  183 (596)
T ss_pred             eeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHh---hcceeccccch
Confidence            7899999999999999997543  3445777788999999999999   99999999995

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.65  E-value=1.6e-15  Score=149.36  Aligned_cols=123  Identities=29%  Similarity=0.415  Sum_probs=103.2

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||+|+||.||+|+. .+|+.|++|++.....   .....+.+|++++++++|+|++++.+++.     +++..+
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~   97 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-----KEHTAW   97 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEEE
Confidence            44457799999999999985 4688999999864322   22356889999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ |++.+++... ...++|..+..++.|++.||+|||   ..+|+||||||
T Consensus        98 lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p  149 (313)
T cd06633          98 LVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKA  149 (313)
T ss_pred             EEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCh
Confidence            9999996 6888877543 346999999999999999999999   88999999997

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.65  E-value=1.3e-15  Score=152.54  Aligned_cols=129  Identities=22%  Similarity=0.314  Sum_probs=106.0

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EG  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~  364 (425)
                      ..++|...+.||+|+||.||++. ..+|+.||||.+...  .....+++.+|++++.+++|+||+++++++...... +.
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            34678888999999999999998 457899999998642  223345678899999999999999999988643321 22


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++||||+. ++|.+.+..    .+++.....++.|+++||+|||   ..+|+||||||
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp  146 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  146 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCH
Confidence            45799999996 688888743    2899999999999999999999   88999999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.65  E-value=5.2e-16  Score=160.32  Aligned_cols=124  Identities=27%  Similarity=0.397  Sum_probs=108.7

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-C-----CcccceeeEEeeccccCC
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-H-----VNLVALRGYCIATTQLEG  364 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H-----~NIV~l~g~~~~~~~~~~  364 (425)
                      +|...++||+|.||.|.|+. ..+++.||||++++... -..+-..|+.+|..++ |     -|+|+++.|+.     ..
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-----fr  260 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY-----FR  260 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc-----cc
Confidence            57788999999999999998 56799999999987432 2344567999999996 4     38999999998     67


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..+||+|.++ -+|.++|..+....|+......|+.||+.||.+||   +.+|||+||||
T Consensus       261 ~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKP  317 (586)
T KOG0667|consen  261 NHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKP  317 (586)
T ss_pred             cceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCh
Confidence            78899999996 79999998877778999999999999999999999   99999999998

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.65  E-value=6.4e-16  Score=152.71  Aligned_cols=128  Identities=25%  Similarity=0.374  Sum_probs=107.1

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +|...+.||+|+||.||++... +|+.||||++....  ....+.+.+|+++++.++|+||+++.+++...........+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4667789999999999999954 58999999987533  33346789999999999999999999998753322234679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ ++|.+++...  ..+++..+..++.++++||+|||   +.+|+||||||
T Consensus        81 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp  131 (330)
T cd07834          81 IVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKP  131 (330)
T ss_pred             EEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            9999998 5898888543  37999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.2e-15  Score=145.21  Aligned_cols=119  Identities=21%  Similarity=0.249  Sum_probs=97.3

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHh-hCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIA-SVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~-~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||++.. .+|+.||||.++....   .....+..|..++. ..+|+|++++++++.     +++..++|+
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence            4689999999999985 4689999999865321   22234555655544 458999999999987     556789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++|.+++...  ..+++.....++.|+++||.|||   +.+|+||||||
T Consensus        77 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p  125 (260)
T cd05611          77 EYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKP  125 (260)
T ss_pred             eccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            999999999998543  45899999999999999999999   88999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.64  E-value=7e-16  Score=149.24  Aligned_cols=125  Identities=25%  Similarity=0.367  Sum_probs=100.2

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|+||.||++.. .+|+.||+|.+.... ......+.+|+.++.++. |+||+++++++.     .++..++
T Consensus         6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~~~   80 (288)
T cd06616           6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDCWI   80 (288)
T ss_pred             hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcEEE
Confidence            44457799999999999984 468999999987432 234567899999999996 999999999886     4567799


Q ss_pred             EEecCCCCCHHHH---HhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDH---LFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~---L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||++ +++.++   +.......+++.....++.++++||+|||+  ..+|+||||||
T Consensus        81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp  136 (288)
T cd06616          81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKP  136 (288)
T ss_pred             EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCH
Confidence            999987 455543   333334569999999999999999999992  35899999997

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.64  E-value=5.8e-16  Score=155.48  Aligned_cols=121  Identities=17%  Similarity=0.217  Sum_probs=92.8

Q ss_pred             HHHHHhcCcccceeecccCcccEEeeecC--CCCeeEEeeecCC-----CccchHHHHHHHHHHhhCCCCcccceeeEEe
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGLLP--DGSEVALKRFKNC-----SAAGDATFKHEVEVIASVRHVNLVALRGYCI  357 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~l~--~g~~VAVK~l~~~-----~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~  357 (425)
                      .+....++|...+.||+|+||+||+|...  +++.||||++...     .....+.|.+|+++|.+++|+|++..+... 
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-   90 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-   90 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence            33445677999999999999999999853  5788899987532     112245689999999999999998533221 


Q ss_pred             eccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CC
Q 048791          358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDI-KA  425 (425)
Q Consensus       358 ~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDL-Kp  425 (425)
                             +..+|||||+++++|.. + ... .      ...++.++++||+|||   +.+|+|||| ||
T Consensus        91 -------~~~~LVmE~~~G~~L~~-~-~~~-~------~~~~~~~i~~aL~~lH---~~gIiHrDL~KP  140 (365)
T PRK09188         91 -------GKDGLVRGWTEGVPLHL-A-RPH-G------DPAWFRSAHRALRDLH---RAGITHNDLAKP  140 (365)
T ss_pred             -------CCcEEEEEccCCCCHHH-h-Ccc-c------hHHHHHHHHHHHHHHH---HCCCeeCCCCCc
Confidence                   23699999999999963 2 111 1      1467889999999999   899999999 87

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.64  E-value=1.3e-15  Score=146.44  Aligned_cols=122  Identities=27%  Similarity=0.368  Sum_probs=104.2

Q ss_pred             ccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          294 SRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ...+.||+|++|.||++.. .+|+.+++|+++....  .....+.+|++++++++|+||+++.+++.     .+...++|
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v   76 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-----HKGDLYLV   76 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-----cCCCEEEE
Confidence            4457899999999999985 4689999999875332  23467889999999999999999999987     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||++ +++.+++.... ..+++..+..++.++++||.|||   +.+|+||||||
T Consensus        77 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p  126 (283)
T cd05118          77 FEFMD-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKP  126 (283)
T ss_pred             EeccC-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCH
Confidence            99998 58888886533 56999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.64  E-value=1.5e-15  Score=147.97  Aligned_cols=125  Identities=21%  Similarity=0.353  Sum_probs=102.7

Q ss_pred             cCcccceeecccCcccEEeeecCC-CCeeEEeeecCCC-ccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCS-AAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++...+ ++.||||.++... .....++..|++++.+.+ |+||+++++++.     ++...
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~   89 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-----TDSDV   89 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-----cCCeE
Confidence            456777999999999999999754 8999999997533 223456778888777775 999999999997     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      ++||||++ +++.+.+... ...++|..+..|+.+|++||+|||   + ++|+||||||
T Consensus        90 ~~v~e~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p  143 (296)
T cd06618          90 FICMELMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKP  143 (296)
T ss_pred             EEEeeccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcH
Confidence            99999986 5777666442 347999999999999999999999   5 5899999996

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.64  E-value=8.3e-16  Score=147.65  Aligned_cols=123  Identities=29%  Similarity=0.373  Sum_probs=105.1

Q ss_pred             cccceeecccCcccEEeeecC-CCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|+||.||+|+.. +++.||+|.++...  ....+.+..|++++++++|+|++++.+++.     +.+..++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence            344578999999999999964 58999999997543  233467889999999999999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+||++ ++|.+++.... ..+++..+..++.++++||+|||   +.+|+||||||
T Consensus        76 v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~  126 (282)
T cd07829          76 VFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKP  126 (282)
T ss_pred             EecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence            999998 69999996532 46999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.64  E-value=1.2e-15  Score=161.34  Aligned_cols=138  Identities=28%  Similarity=0.426  Sum_probs=119.5

Q ss_pred             HHHHHHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          283 FDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       283 ~~ei~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ++.+...++-|...++||+|.+|.||+++ .++|+.+|||++.. ....+++...|.+++... .|||++.++|++...+
T Consensus        11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~-~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDP-TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecC-CccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            34444456668888999999999999998 56899999999865 334456778899999888 5999999999998877


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      ...+++.+||||||.+||.-|.+.......+.|.....|+.++++||.+||   ...+||||||
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDik  150 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIK  150 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeeccc
Confidence            777899999999999999999998766678999999999999999999999   9999999998

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.64  E-value=1.6e-15  Score=148.95  Aligned_cols=123  Identities=31%  Similarity=0.433  Sum_probs=103.1

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |...+.||+|+||.||+|.. .+++.||+|.+...   .....+++.+|++++++++|+|++++.+++.     ..+..+
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~   91 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHTAW   91 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCeeE
Confidence            55557899999999999984 46889999998632   2222357889999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|+||+. |++.+++... ...+++..+..++.+++.||.|||   +.+++||||||
T Consensus        92 lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p  143 (308)
T cd06634          92 LVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKA  143 (308)
T ss_pred             EEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            9999997 6888877543 345899999999999999999999   88999999996

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=8.7e-17  Score=159.04  Aligned_cols=123  Identities=29%  Similarity=0.430  Sum_probs=105.8

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |...+.||+|.||.||||.. ..++.||+|.+.-. .....++...|+.+++.++++||.+.+|.+.     .+...+++
T Consensus        15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl-----~g~~Lwii   89 (467)
T KOG0201|consen   15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL-----KGTKLWII   89 (467)
T ss_pred             cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee-----ecccHHHH
Confidence            55568899999999999984 56899999999743 3444578899999999999999999999987     56678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||.+|++.+.|..  ...++.....-|..++..||.|||   ..+.||||||+
T Consensus        90 Mey~~gGsv~~lL~~--~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKa  139 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKS--GNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKA  139 (467)
T ss_pred             HHHhcCcchhhhhcc--CCCCccceeeeehHHHHHHhhhhh---hcceecccccc
Confidence            999999999999943  344577777788999999999999   89999999996

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.63  E-value=1.7e-15  Score=142.82  Aligned_cols=117  Identities=22%  Similarity=0.290  Sum_probs=101.9

Q ss_pred             ecccCcccEEeeecC-CCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          299 IGRGGYGNVYKGLLP-DGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       299 IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ||+|+||.||++... +++.+|+|.+.....   .....+..|++++++++|+||+++++.+.     .++..++||||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-----TEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----cCCeeEEEEecC
Confidence            699999999999854 589999999875332   23457899999999999999999998876     566789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++|.+++...  ..+++.....++.|+++||.|||   +.+++|+||||
T Consensus        76 ~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p  121 (250)
T cd05123          76 PGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKP  121 (250)
T ss_pred             CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCc
Confidence            999999999643  35899999999999999999999   89999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.63  E-value=9.5e-16  Score=140.93  Aligned_cols=117  Identities=16%  Similarity=0.255  Sum_probs=89.2

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCcc--c-------hHHH-----------------HHHHHHHhhCCCCccc
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA--G-------DATF-----------------KHEVEVIASVRHVNLV  350 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~--~-------~~~f-----------------~~Ev~il~~l~H~NIV  350 (425)
                      ..||+|+||.||+|...+|+.||||+++.....  .       ...|                 ..|++.+.++.|+++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~   82 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP   82 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            579999999999999889999999999753211  1       1122                 3499999999888764


Q ss_pred             ceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCeeecCCCC
Q 048791          351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL-HFGAQPAIFHRDIKA  425 (425)
Q Consensus       351 ~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YL-H~~~~~~IiHRDLKp  425 (425)
                      ....+..       ...+|||||++++++......  ...+++.....++.|++.+|.|| |   ..+||||||||
T Consensus        83 ~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP  146 (190)
T cd05147          83 CPEPILL-------KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSE  146 (190)
T ss_pred             CCcEEEe-------cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            4333221       123899999998877655322  24689999999999999999999 6   67999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.63  E-value=2.8e-15  Score=148.75  Aligned_cols=127  Identities=23%  Similarity=0.316  Sum_probs=102.7

Q ss_pred             CcccceeecccCcccEEeeecC-C--CCeeEEeeecCCC--ccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-D--GSEVALKRFKNCS--AAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~--g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +|...+.||+|+||.||++... +  +..||||++....  ....+.+.+|++++.+++ |+||+++++.+..... ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~-~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPG-NFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccc-cCC
Confidence            4667789999999999999853 4  7899999986422  223457889999999995 9999999997653211 234


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++++||++ ++|.+++..  ...+++.....++.||++||+|||   ..+|+||||||
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp  133 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKP  133 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            5788899986 689988853  346999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.63  E-value=2.2e-15  Score=146.97  Aligned_cols=131  Identities=27%  Similarity=0.375  Sum_probs=106.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccc---cC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQ---LE  363 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~---~~  363 (425)
                      .++|...+.||+|+||.||++.. .+++.||||++.....  .....+.+|++++.+++|+||+++++++.....   ..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            56788999999999999999984 4689999999864322  223467899999999999999999998764321   12


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....++|+||++ +++...+... ...+++.....++.|+++||+|||   +.+|+||||||
T Consensus        87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p  143 (311)
T cd07866          87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKA  143 (311)
T ss_pred             CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            346799999997 4777777543 346999999999999999999999   88999999996

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.62  E-value=6e-17  Score=149.66  Aligned_cols=126  Identities=25%  Similarity=0.359  Sum_probs=105.9

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecC--CCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKN--CSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~--~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +++|+..+.||+|.|+.||+.. .++|+.+|+|.+..  -+..+.+++.+|+.+-..++|||||+|..-..     +.+.
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~-----~~~~   84 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF   84 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc-----ccce
Confidence            3456667889999999999987 56899999998853  23345678899999999999999999987765     6778


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|||+|+|.+|+|..-+..+  ...++...-..+.||.++|.|.|   ..+|||||+||
T Consensus        85 ~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP  138 (355)
T KOG0033|consen   85 HYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKP  138 (355)
T ss_pred             eEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCCh
Confidence            99999999999998766442  34667777789999999999999   99999999998

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.62  E-value=6.1e-16  Score=158.85  Aligned_cols=123  Identities=27%  Similarity=0.463  Sum_probs=99.8

Q ss_pred             ceeecccCcccEEeeec-CCCCeeEEeeec--C--CCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          296 DNIIGRGGYGNVYKGLL-PDGSEVALKRFK--N--CSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~--~--~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ..+||+|.|-+||||.. .+|.+||=-.++  +  .+....+.|..|+.+|+.|+|+|||+++.+..+..   ....-+|
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in~i  121 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTINFI  121 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceeeee
Confidence            46799999999999984 357777732222  1  12333478999999999999999999999877542   3567899


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      .|.|..|+|..|+.+.  +.++.....+.+.||.+||.|||. -.|+|||||||
T Consensus       122 TEL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLK  172 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLK  172 (632)
T ss_pred             eecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccc
Confidence            9999999999999653  458888999999999999999994 47899999998

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=1.1e-15  Score=153.44  Aligned_cols=125  Identities=22%  Similarity=0.337  Sum_probs=106.6

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      -|..++.||+|.|..|-.++ .-+|..||||++.+...  .....+..|+..|+-++|||||+|+...-     .....|
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-----TQTKly   93 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-----TQTKLY   93 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-----ccceEE
Confidence            35667889999999998887 45899999999975432  22346788999999999999999998865     345679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+|.-.+|+|.+|+.+.. ..|.+....+++.||..|+.|.|   +..+|||||||
T Consensus        94 LiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKP  146 (864)
T KOG4717|consen   94 LILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKP  146 (864)
T ss_pred             EEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCc
Confidence            9999999999999997644 34899999999999999999999   99999999998

>PRK10345 hypothetical protein; Provisional

Probab=99.61  E-value=5.3e-15  Score=137.92  Aligned_cols=121  Identities=14%  Similarity=0.166  Sum_probs=93.0

Q ss_pred             cccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-----CCCcccceeeEEeeccccCCce-
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-----RHVNLVALRGYCIATTQLEGHQ-  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-----~H~NIV~l~g~~~~~~~~~~~~-  366 (425)
                      ++....||+|+||.||. .-.++.. +||++........+++.+|+.++.++     .|+||++++|+..++.  .... 
T Consensus         4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v   79 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYV   79 (210)
T ss_pred             cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEE
Confidence            34568899999999996 3234444 79988754444567899999999999     5799999999987542  1223 


Q ss_pred             EEEEEec--CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDL--MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL-AYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey--~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL-~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+|+||  ++.|+|.+++.+.   .+++.  ..++.++..++ +|||   +.+||||||||
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp  133 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKP  133 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCH
Confidence            3478999  6689999999542   36655  35678888888 9999   99999999997

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.61  E-value=1.9e-15  Score=158.96  Aligned_cols=127  Identities=15%  Similarity=0.277  Sum_probs=94.9

Q ss_pred             HhcCcccceeecccCcccEEeeecCC--CCeeEEe------------------eecCCCccchHHHHHHHHHHhhCCCCc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLPD--GSEVALK------------------RFKNCSAAGDATFKHEVEVIASVRHVN  348 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~~--g~~VAVK------------------~l~~~~~~~~~~f~~Ev~il~~l~H~N  348 (425)
                      ..++|...+.||+|+||+||++....  +..+++|                  +++. .......|.+|++++.+++|+|
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCC
Confidence            35679999999999999999986422  2222222                  1111 1122356889999999999999


Q ss_pred             ccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       349 IV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~---~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||++++++.     ..+..++|+|++. ++|.+++....   ...........|+.||+.||+|||   +.+||||||||
T Consensus       225 Iv~l~~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP  295 (501)
T PHA03210        225 ILKIEEILR-----SEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKL  295 (501)
T ss_pred             cCcEeEEEE-----ECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            999999987     4556799999985 67888775432   122335566789999999999999   89999999997

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=2.5e-16  Score=161.12  Aligned_cols=121  Identities=24%  Similarity=0.311  Sum_probs=104.8

Q ss_pred             ceeecccCcccEEeeecCC-CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          296 DNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ...||.|+||+|||++-.+ +-..|-|.+...+....++|+-||+||+..+||+||+|++.+.     ..+..+++.|||
T Consensus        37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy-----~enkLwiliEFC  111 (1187)
T KOG0579|consen   37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY-----FENKLWILIEFC  111 (1187)
T ss_pred             HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh-----ccCceEEEEeec
Confidence            3568999999999998544 4456778887666667789999999999999999999999876     456789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+|..+..+..-. +.|+..+..-++++++.||.|||   +..|||||||+
T Consensus       112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKA  158 (1187)
T KOG0579|consen  112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKA  158 (1187)
T ss_pred             CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHh---hcchhhhhccc
Confidence            9999998886643 46999999999999999999999   99999999996

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.60  E-value=1.3e-14  Score=133.97  Aligned_cols=124  Identities=27%  Similarity=0.434  Sum_probs=107.0

Q ss_pred             cccceeecccCcccEEeeecCC-CCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |...+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++.     .....+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence            4556889999999999999764 889999999754433 5678999999999999999999999986     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||+++++|.+++..... .+++.....++.++++++.|||   +.+++|+||+|
T Consensus        76 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~  126 (225)
T smart00221       76 MEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKP  126 (225)
T ss_pred             EeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            999999999999865332 2899999999999999999999   78999999985

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.60  E-value=1.3e-15  Score=145.02  Aligned_cols=126  Identities=26%  Similarity=0.471  Sum_probs=102.3

Q ss_pred             CcccceeecccCcccEEeeec---CC--CCeeEEeeecCCCc-cc-hHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL---PD--GSEVALKRFKNCSA-AG-DATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l---~~--g~~VAVK~l~~~~~-~~-~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .|.....||+|.||.|||++-   ++  ...+|||+++..+. .+ -....+|+.++++++|+||+.|......    .+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~----~d  100 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS----HD  100 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc----cC
Confidence            456668899999999999963   23  23799999985432 22 2467899999999999999999888764    35


Q ss_pred             ceEEEEEecCCCCCHHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFA---SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~---~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...+|++||.+ -+|.+.++-   ...+.++-.....|..||..|+.|||   +.-|+||||||
T Consensus       101 ~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKP  160 (438)
T KOG0666|consen  101 KKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKP  160 (438)
T ss_pred             ceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCc
Confidence            67899999998 588877753   23356899999999999999999999   99999999998

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.59  E-value=3e-15  Score=149.42  Aligned_cols=130  Identities=25%  Similarity=0.375  Sum_probs=106.1

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEG  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~  364 (425)
                      ..++|...+.||+|+||.||+|.. .+++.||||++...  .....+.+.+|+.++++++|+|++++.+++..... .+.
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            356788889999999999999985 46889999998642  22233567889999999999999999987653221 122


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++|+||+ +++|.+++..   ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp  146 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKP  146 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            3479999999 5799998854   46999999999999999999999   89999999996

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.59  E-value=4.9e-15  Score=159.00  Aligned_cols=128  Identities=26%  Similarity=0.410  Sum_probs=107.4

Q ss_pred             hcCcccceeecccCcccEEeeecC--------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeec
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP--------DGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIAT  359 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~--------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~  359 (425)
                      .+++...+.||+|.||+|++|.+.        ....||||.++... ....+.+..|+++|..+ +|+|||.++|+|.  
T Consensus       295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t--  372 (609)
T KOG0200|consen  295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT--  372 (609)
T ss_pred             hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec--
Confidence            344555569999999999999842        14579999998543 34567899999999999 5999999999998  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCC------------C--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASN------------G--PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~------------~--~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         +++..++|.||+++|+|.+||+..+            .  ..|+-...+.++.|||+||+||+   +.++|||||.+
T Consensus       373 ---~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAa  446 (609)
T KOG0200|consen  373 ---QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAA  446 (609)
T ss_pred             ---cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhh
Confidence               4667899999999999999997643            0  23889999999999999999999   99999999964

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=5.2e-15  Score=153.46  Aligned_cols=126  Identities=24%  Similarity=0.333  Sum_probs=106.1

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ...++|....+||+|.||+|+++.+ .+++.+|||.+++..   ..+.+..+.|..++.-. +||.|++|+.++.     
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQ-----  439 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQ-----  439 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccc-----
Confidence            3456888999999999999999996 468899999998754   23346678888887766 5999999999887     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      ..+..|.||||..+|++..+.   ....++.....-+|..|+.||.|||   +++||+||||
T Consensus       440 T~~~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlK  495 (694)
T KOG0694|consen  440 TKEHLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLK  495 (694)
T ss_pred             cCCeEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecc
Confidence            456789999999999954443   3356999999999999999999999   9999999998

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.57  E-value=1.6e-14  Score=132.67  Aligned_cols=118  Identities=16%  Similarity=0.215  Sum_probs=90.6

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCcc--c------------------------hHHHHHHHHHHhhCCCCcc
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA--G------------------------DATFKHEVEVIASVRHVNL  349 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~--~------------------------~~~f~~Ev~il~~l~H~NI  349 (425)
                      ...||+|+||.||+|...+|+.||||.++.....  .                        ...+..|.+.+.+++|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3679999999999999778999999998753211  0                        1124578999999999988


Q ss_pred             cceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       350 V~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      .....+..     .  ..+|||||++++++......  ...++......|+.+++.+|.|||   . .+|+||||||
T Consensus        82 ~~p~~~~~-----~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP  146 (190)
T cd05145          82 PVPEPILL-----K--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSE  146 (190)
T ss_pred             CCceEEEe-----c--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCh
Confidence            65544432     1  24899999998865443222  235788889999999999999999   6 8999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.57  E-value=1.5e-14  Score=136.54  Aligned_cols=109  Identities=19%  Similarity=0.233  Sum_probs=92.6

Q ss_pred             cCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCCCCCHH
Q 048791          302 GGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVY  380 (425)
Q Consensus       302 G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~  380 (425)
                      |.||.||++.. .+|+.||+|++....     .+..|...+....|+|++++++++.     +++..++||||+++|+|.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV-----SEDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee-----cCCeEEEEEecCCCCCHH
Confidence            78999999984 578999999997532     3445556666667999999999887     566789999999999999


Q ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          381 DHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       381 ~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        74 ~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp  113 (237)
T cd05576          74 SHISKF--LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNP  113 (237)
T ss_pred             HHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            998653  35999999999999999999999   89999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.56  E-value=1.4e-14  Score=141.67  Aligned_cols=136  Identities=20%  Similarity=0.289  Sum_probs=113.9

Q ss_pred             HHHHHHHhcCcccceeecccCcccEEeeec------CCCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeE
Q 048791          283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGY  355 (425)
Q Consensus       283 ~~ei~~at~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~  355 (425)
                      .+|+.....++....++.+|.||.||.|.+      .+.+.|-||.++.. +......|+.|-.++..+.|||+..+.|.
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            355555666788888999999999999964      34567889999853 44445789999999999999999999999


Q ss_pred             EeeccccCCceEEEEEecCCCCCHHHHHh-----c-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDLMKNGSVYDHLF-----A-SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~-----~-~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++.    +....+.+|.++.-|+|+.||.     + +..+.++-.+.+.++.|++.||+|||   +.+|||.||.+
T Consensus       356 ~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAa  424 (563)
T KOG1024|consen  356 SIE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAA  424 (563)
T ss_pred             Eee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhh
Confidence            985    5567899999999999999997     2 23456888899999999999999999   99999999964

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.56  E-value=4.8e-14  Score=127.33  Aligned_cols=118  Identities=32%  Similarity=0.474  Sum_probs=102.5

Q ss_pred             ecccCcccEEeeecCC-CCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCCC
Q 048791          299 IGRGGYGNVYKGLLPD-GSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKN  376 (425)
Q Consensus       299 IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~  376 (425)
                      ||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.+.+++|++++++++++.     .....++++||+++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence            6899999999999754 899999999754332 3467999999999999999999999987     44678999999999


Q ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          377 GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       377 GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|.+++.... ..+++..+..++.+++++|.|||   +.+++|+||+|
T Consensus        76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~  120 (215)
T cd00180          76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKP  120 (215)
T ss_pred             CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            99999986432 46899999999999999999999   88999999986

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.56  E-value=1.1e-15  Score=167.20  Aligned_cols=128  Identities=30%  Similarity=0.416  Sum_probs=108.0

Q ss_pred             HHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ..+-+|...+.||.|.||.||.+. .++|...|||.++-..  ....+...+|+.++..++|||+|+.+|.-.     +.
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv-----HR 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV-----HR 1306 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee-----cH
Confidence            334567788999999999999998 7789999999887432  344567789999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..+|-||||++|+|.+.+..  .+..+.....-+-.|++.|++|||   +.+||||||||
T Consensus      1307 ekv~IFMEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~ 1362 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKP 1362 (1509)
T ss_pred             HHHHHHHHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCc
Confidence            567999999999999999843  234667777778899999999999   99999999997

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.55  E-value=5.8e-15  Score=160.74  Aligned_cols=134  Identities=25%  Similarity=0.317  Sum_probs=100.9

Q ss_pred             HHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccc----
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ----  361 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~----  361 (425)
                      +...+|.+..+||+||||.|||++ --||+.+|||++... +........+|+.++++|+|||||+++...+..+.    
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~  555 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV  555 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence            445678888999999999999998 338999999999743 33334567889999999999999988652111000    


Q ss_pred             --------------------------------------------------------------------------------
Q 048791          362 --------------------------------------------------------------------------------  361 (425)
Q Consensus       362 --------------------------------------------------------------------------------  361 (425)
                                                                                                      
T Consensus       556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~  635 (1351)
T KOG1035|consen  556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD  635 (1351)
T ss_pred             ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------cCC-------ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          362 -----------------------LEG-------HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       362 -----------------------~~~-------~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                                             .+.       ...||-||||+.-.+.+++..+.... .-....+++.+|++||+|+|
T Consensus       636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH
Confidence                                   000       23588999999888888875532211 34455679999999999999


Q ss_pred             cCCCCCeeecCCCC
Q 048791          412 FGAQPAIFHRDIKA  425 (425)
Q Consensus       412 ~~~~~~IiHRDLKp  425 (425)
                         +.+||||||||
T Consensus       715 ---~~giIHRDLKP  725 (1351)
T KOG1035|consen  715 ---DQGIIHRDLKP  725 (1351)
T ss_pred             ---hCceeeccCCc
Confidence               99999999998

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.52  E-value=8.4e-14  Score=129.32  Aligned_cols=113  Identities=26%  Similarity=0.376  Sum_probs=98.9

Q ss_pred             CcccEEeeecC-CCCeeEEeeecCCCccc-hHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCCCCCHH
Q 048791          303 GYGNVYKGLLP-DGSEVALKRFKNCSAAG-DATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVY  380 (425)
Q Consensus       303 ~fG~Vykg~l~-~g~~VAVK~l~~~~~~~-~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~  380 (425)
                      +||.||+++.. +|+.+|+|++....... .+.|.+|++.+++++|+|++++.+++.     .....++++||+++++|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-----DEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-----eCCEEEEEEeCCCCCCHH
Confidence            58999999965 58999999997644433 678999999999999999999999987     456789999999999999


Q ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          381 DHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       381 ~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++....  .+++..+..++.++++++.|||   +.+|+|+||+|
T Consensus        76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~  115 (244)
T smart00220       76 DLLKKRG--RLSEDEARFYARQILSALEYLH---SNGIIHRDLKP  115 (244)
T ss_pred             HHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCH
Confidence            9986533  3899999999999999999999   88999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.52  E-value=1.1e-13  Score=134.95  Aligned_cols=128  Identities=19%  Similarity=0.198  Sum_probs=89.5

Q ss_pred             cCcccceeecccCcccEEeeecCC----CCeeEEeeecCCCccc--h---------HHHHHHHHHHhhCCCCcccceeeE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD----GSEVALKRFKNCSAAG--D---------ATFKHEVEVIASVRHVNLVALRGY  355 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~----g~~VAVK~l~~~~~~~--~---------~~f~~Ev~il~~l~H~NIV~l~g~  355 (425)
                      ++|...++||+|+||.||+|...+    +..+|+|.........  +         .....+...+..++|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            468888999999999999998543    3456666543221111  0         112233445566789999999998


Q ss_pred             EeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..... .....++++|++. .++.+.+..  ....++.....|+.|+++||+|||   +.+|+||||||
T Consensus        92 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp  154 (294)
T PHA02882         92 GSFKRC-RMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKP  154 (294)
T ss_pred             eeEecC-CceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            764322 1234578888775 466665532  223678889999999999999999   88999999997

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.51  E-value=1.5e-14  Score=135.68  Aligned_cols=126  Identities=26%  Similarity=0.404  Sum_probs=104.8

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccc------hHHHHHHHHHHhhC-CCCcccceeeEEeec
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAG------DATFKHEVEVIASV-RHVNLVALRGYCIAT  359 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~------~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~  359 (425)
                      -.+|...++||.|..+.|.+... .+|++.|+|++....  .++      .++-..|+++|+++ .||+|+++..++.+ 
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes-   94 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES-   94 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC-
Confidence            44567778999999999988874 578999999986422  111      24456799999998 59999999999874 


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          ....++|+|.|+.|.|.|+|.+  .-.++.....+|+.++..|++|||   ...||||||||
T Consensus        95 ----~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKp  151 (411)
T KOG0599|consen   95 ----DAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKP  151 (411)
T ss_pred             ----cchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccCh
Confidence                4456999999999999999954  346899999999999999999999   99999999997

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=9.8e-15  Score=157.94  Aligned_cols=133  Identities=22%  Similarity=0.268  Sum_probs=111.6

Q ss_pred             HHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       283 ~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      ..+++...++|...++||+|+||.|...++ .+++.+|.|++.+..   .....-|..|-++|..-..+.||.|.-.+. 
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ-  145 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ-  145 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc-
Confidence            345555667888999999999999999986 468899999997632   233356788899999888999999987775 


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          +.+..|+|||||+||+|...+.+..  .++..-...++..|.-||.-||   +.++|||||||
T Consensus       146 ----D~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKP  203 (1317)
T KOG0612|consen  146 ----DERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKP  203 (1317)
T ss_pred             ----CccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHH---hccceeccCCc
Confidence                5678899999999999999885433  6888888889999999999999   99999999998

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.49  E-value=1.1e-14  Score=133.69  Aligned_cols=121  Identities=21%  Similarity=0.400  Sum_probs=103.3

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.+|+|.++.||.|. ..+.+.++||.++...   .+...+|+.+|.+++ |+||++|+....++   +.....
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~Sktpa  111 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP---ESKTPS  111 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc---cccCch
Confidence            456677889999999999998 6678899999998643   356789999999998 99999999988754   345678


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+||..|.+.....     ++|+-.....++.++.+||.|.|   +.+|+|||+||
T Consensus       112 LiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKP  160 (338)
T KOG0668|consen  112 LIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKP  160 (338)
T ss_pred             hHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCc
Confidence            999999998876654     35778888889999999999999   99999999998

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.49  E-value=1.4e-13  Score=127.56  Aligned_cols=114  Identities=18%  Similarity=0.267  Sum_probs=93.1

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCcc--------chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA--------GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~--------~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +.||+|++|.||+|.. +|..|+||+.......        ....+.+|++++..++|+|+.....++.     ..+..+
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~   75 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-----DPENFI   75 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-----eCCCCE
Confidence            5699999999999987 6788999986542211        1245788999999999999887777765     334568


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++++|.+++...     .+ .+..++.+++.+|.+||   ..+++|||+||
T Consensus        76 lv~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p  123 (211)
T PRK14879         76 IVMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLH---SAGIIHGDLTT  123 (211)
T ss_pred             EEEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCc
Confidence            999999999999988532     23 88899999999999999   89999999987

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.49  E-value=1.1e-13  Score=146.68  Aligned_cols=120  Identities=18%  Similarity=0.260  Sum_probs=93.0

Q ss_pred             HHHhcCcccceeecccCcccEEeeecCCCCeeEEee-ecCCCc-------cchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKR-FKNCSA-------AGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~-l~~~~~-------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      ......|...+.||+|+||.||+|.+.+.. +++|+ +.....       ...+.+.+|++++.+++|++++....++. 
T Consensus       329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-  406 (535)
T PRK09605        329 EEVKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV-  406 (535)
T ss_pred             cccccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE-
Confidence            333445566789999999999999875443 44443 222111       11256889999999999999998877776 


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          .....++||||+++++|.+++.          .+..++.+++++|.|||   +.+|+||||||
T Consensus       407 ----~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp  456 (535)
T PRK09605        407 ----DPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLH---KAGIVHGDLTT  456 (535)
T ss_pred             ----eCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHH---hCCCccCCCCh
Confidence                3345689999999999999884          45789999999999999   89999999997

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.49  E-value=1.1e-13  Score=147.47  Aligned_cols=130  Identities=19%  Similarity=0.234  Sum_probs=86.8

Q ss_pred             HhcCcccceeecccCcccEEeeecC-C----CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEee-cccc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP-D----GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA-TTQL  362 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~-~----g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~-~~~~  362 (425)
                      ..++|...+.||+|+||.||+|... +    +..||||+++....  .+.+.+|  .+.+..+.+++.+...... ....
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            4578999999999999999999964 4    68999999864321  1122222  1222223333322221111 1112


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCC------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGP------------------KLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~------------------~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      ++...+|||||+++++|.+++......                  ...+.....|+.|+++||+|||   +.+|||||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence            466789999999999999998643211                  1122345579999999999999   8899999999


Q ss_pred             C
Q 048791          425 A  425 (425)
Q Consensus       425 p  425 (425)
                      |
T Consensus       283 P  283 (566)
T PLN03225        283 P  283 (566)
T ss_pred             H
Confidence            7

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.48  E-value=2.2e-14  Score=136.16  Aligned_cols=120  Identities=22%  Similarity=0.299  Sum_probs=102.8

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      .+||-|-.|+|..... .+|+.+|+|.+.+..     ...+|+++--.. .|+|||.++..+...-. ...-.++|||.|
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~-~rkcLLiVmE~m  141 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQ-GRKCLLIVMECM  141 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhcc-CceeeEeeeecc
Confidence            6799999999998874 578999999997632     346788876555 59999999998865433 355678999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|.|.+-+.+.+...+++.+.-+|+.||+.|+.|||   +.+|.||||||
T Consensus       142 eGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKp  189 (400)
T KOG0604|consen  142 EGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKP  189 (400)
T ss_pred             cchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCCh
Confidence            9999999998887778999999999999999999999   99999999997

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=1.3e-13  Score=139.83  Aligned_cols=124  Identities=19%  Similarity=0.271  Sum_probs=107.1

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecC--CCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKN--CSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~--~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .|...+.||+||...|||+...+.+.+|+|++..  .+.+....|.+|+.+|.+++ |.+||+|+.|-+     .++..|
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-----~d~~lY  436 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-----TDGYLY  436 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec-----cCceEE
Confidence            4666788999999999999988889999998863  34455678999999999996 999999999987     566889


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||-+ .+|..+|........+| .+..+..|++.++.++|   +.+|||.||||
T Consensus       437 mvmE~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKP  488 (677)
T KOG0596|consen  437 MVMECGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKP  488 (677)
T ss_pred             EEeeccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCc
Confidence            9999885 79999997765555667 66789999999999999   99999999998

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=4.7e-14  Score=139.68  Aligned_cols=129  Identities=22%  Similarity=0.311  Sum_probs=106.0

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecC---CCccch----HHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKN---CSAAGD----ATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~---~~~~~~----~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      .++|-..++||+|||..|||+. +...+.||||+-..   +.....    +-..+|-++-+.+.|+-||+++.|+.-   
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl---  538 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL---  538 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee---
Confidence            3456667899999999999998 56678999997532   111111    235679999999999999999999874   


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +.+..+-|+||+++.+|+.||...  +.++......|+.||..||.||. +-+++|||-||||
T Consensus       539 -DtdsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLN-EikpPIIHYDLKP  598 (775)
T KOG1151|consen  539 -DTDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLN-EIKPPIIHYDLKP  598 (775)
T ss_pred             -ccccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHh-ccCCCeeeeccCC
Confidence             556678999999999999999543  46899999999999999999998 5689999999998

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.46  E-value=1.5e-13  Score=135.60  Aligned_cols=125  Identities=27%  Similarity=0.320  Sum_probs=106.9

Q ss_pred             HHHHhcCcccceeecccCcccEEeeecC----CCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeecc
Q 048791          286 IKKATRNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATT  360 (425)
Q Consensus       286 i~~at~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~  360 (425)
                      +....+.|...++||+|.|+.||++...    ....||+|.+...+.-  ....+|+++|..+. +.||+++.++..   
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~r---  105 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFR---  105 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhc---
Confidence            4445566888899999999999999843    4678999999754432  45789999999996 899999999886   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        .+++..+|+||++.-.-.+++..     ++......+...+.+||+|+|   ..+||||||||
T Consensus       106 --nnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKp  160 (418)
T KOG1167|consen  106 --NNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKP  160 (418)
T ss_pred             --cCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCc
Confidence              57788999999999999988853     678888999999999999999   99999999998

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.46  E-value=2.4e-13  Score=124.90  Aligned_cols=110  Identities=18%  Similarity=0.272  Sum_probs=86.6

Q ss_pred             eecccCcccEEeeecCCCCeeEEeeecCCC-cc-------chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          298 IIGRGGYGNVYKGLLPDGSEVALKRFKNCS-AA-------GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~-~~-------~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .||+|+||.||+|.+ +|..|++|...... ..       ..+++.+|++++.+++|+++.....++.     ..+..++
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~l   74 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKTI   74 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCEE
Confidence            489999999999995 67889999865321 11       1256788999999999887665555554     2345689


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+.+....   .      .++.+++++|.+||   ..+++|||+||
T Consensus        75 v~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH---~~gi~H~Dl~~  118 (199)
T TIGR03724        75 VMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLH---KAGIVHGDLTT  118 (199)
T ss_pred             EEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHH---HCCeecCCCCc
Confidence            999999999998874321   0      78999999999999   99999999997

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.45  E-value=1.2e-13  Score=140.70  Aligned_cols=123  Identities=22%  Similarity=0.375  Sum_probs=101.6

Q ss_pred             CcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccc--------hHHHHHHHHHHhhCC---CCcccceeeEEeec
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAG--------DATFKHEVEVIASVR---HVNLVALRGYCIAT  359 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~--------~~~f~~Ev~il~~l~---H~NIV~l~g~~~~~  359 (425)
                      +|.....+|+|+||.|..+... +..+|+||.+.+..--.        .-....||.+|+.++   |+||+|++.++.  
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE--  639 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE--  639 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee--
Confidence            4777889999999999999864 46789999886532111        123567999999997   999999999997  


Q ss_pred             cccCCceEEEEEecC-CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          360 TQLEGHQRIIVCDLM-KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~-~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                         +.+..||++|-. ++-+|.+++  ..++.+++....-|..||+-|+++||   +.+|||||||
T Consensus       640 ---ddd~yyl~te~hg~gIDLFd~I--E~kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdik  697 (772)
T KOG1152|consen  640 ---DDDYYYLETEVHGEGIDLFDFI--EFKPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIK  697 (772)
T ss_pred             ---cCCeeEEEecCCCCCcchhhhh--hccCccchHHHHHHHHHHHhcccccc---ccCceecccc
Confidence               566789999854 567888888  34567999999999999999999999   9999999998

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.45  E-value=7.8e-14  Score=138.64  Aligned_cols=127  Identities=23%  Similarity=0.339  Sum_probs=110.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +.|+.-++||+||||.||-.+. .+|+.+|.|++.+.   ..+++.-.++|-.+|.++..+.||.+--.+.     ..+.
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfe-----Tkd~  259 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFE-----TKDA  259 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeec-----CCCc
Confidence            4577889999999999999884 57999999988532   3456667789999999999999999866665     3556


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..||+..|.+|+|.-||++...+.++....+.+|.+|+.||++||   ..+||.||+||
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKP  315 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKP  315 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCCh
Confidence            799999999999999998877778999999999999999999999   99999999998

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.1e-14  Score=135.23  Aligned_cols=128  Identities=27%  Similarity=0.430  Sum_probs=101.3

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecC-CCccc-hHHHHHHHHHHhhCCCCcccceeeEEeeccc---cCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKN-CSAAG-DATFKHEVEVIASVRHVNLVALRGYCIATTQ---LEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~-~~~~~-~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~---~~~~~  366 (425)
                      |....+||+|.||.||+++. .+|+.||+|++-- ....+ -..-++|+.+|..++|+|++.++..|.+...   .....
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            34457899999999999985 4688899987642 12222 2456899999999999999999998865322   23345


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+||+++++ .+|...|.+ ....++.....+++.++..||.|+|   ...|+|||+||
T Consensus        99 ~ylVf~~ce-hDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKa  152 (376)
T KOG0669|consen   99 FYLVFDFCE-HDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKA  152 (376)
T ss_pred             eeeeHHHhh-hhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccH
Confidence            799999998 578777743 3356899999999999999999999   99999999997

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.7e-13  Score=140.63  Aligned_cols=124  Identities=20%  Similarity=0.238  Sum_probs=104.8

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCcc---chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAA---GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~---~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      -|...+.||-|+||.|..+. .++...+|.|.+.+.+.-   ...-...|-+||++...+.||+|+-.+.     +++..
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ-----DkdnL  704 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL  704 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec-----cCCce
Confidence            47778899999999999886 556778999999765432   2234577999999999999999987776     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |.||||.++|++-..|-..  +.+.+.....++.+++.|++|.|   +.++|||||||
T Consensus       705 YFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKP  757 (1034)
T KOG0608|consen  705 YFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKP  757 (1034)
T ss_pred             EEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHH---hccceecccCc
Confidence            9999999999999988543  46888888889999999999999   99999999997

>smart00090 RIO RIO-like kinase

Probab=99.42  E-value=5e-13  Score=127.10  Aligned_cols=120  Identities=13%  Similarity=0.131  Sum_probs=90.0

Q ss_pred             CcccceeecccCcccEEeee--cCCCCeeEEeeecCCCcc------------------------chHHHHHHHHHHhhCC
Q 048791          292 NFSRDNIIGRGGYGNVYKGL--LPDGSEVALKRFKNCSAA------------------------GDATFKHEVEVIASVR  345 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~--l~~g~~VAVK~l~~~~~~------------------------~~~~f~~Ev~il~~l~  345 (425)
                      .|...+.||+|+||.||+|.  ..+|+.||||.++.....                        ....+..|++.+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            46667899999999999998  678999999998743210                        0123568999999997


Q ss_pred             CCc--ccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-eeecC
Q 048791          346 HVN--LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA-IFHRD  422 (425)
Q Consensus       346 H~N--IV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~-IiHRD  422 (425)
                      +.+  +.+.+++         ...++||||+++++|......  ...++......++.+|+.+|+|||   ..+ |+|||
T Consensus       109 ~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~D  174 (237)
T smart00090      109 EAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLK--DVEPEEEEEFELYDDILEEMRKLY---KEGELVHGD  174 (237)
T ss_pred             hcCCCCCeeeEe---------cCceEEEEEecCCcccccccc--cCCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCC
Confidence            643  3333332         124899999999888765422  234556667789999999999999   888 99999


Q ss_pred             CCC
Q 048791          423 IKA  425 (425)
Q Consensus       423 LKp  425 (425)
                      |||
T Consensus       175 ikp  177 (237)
T smart00090      175 LSE  177 (237)
T ss_pred             CCh
Confidence            997

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.40  E-value=3.5e-13  Score=142.40  Aligned_cols=120  Identities=29%  Similarity=0.346  Sum_probs=92.7

Q ss_pred             cccceeecccCccc-EEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEE
Q 048791          293 FSRDNIIGRGGYGN-VYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       293 f~~~~~IG~G~fG~-Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      |...+++|.|.-|+ ||+|.+ +|++||||++-...   ..-..+||..|..- +|+|||++++.-.     +....||.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~-----d~qF~YIa  581 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQ-----DRQFLYIA  581 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeecc-----CCceEEEE
Confidence            56678899999988 799998 68999999985422   12346899999988 5999999866543     56688999


Q ss_pred             EecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|.|. -+|.+++...  ......-.....+..|+++||++||   ...||||||||
T Consensus       582 lELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkP  634 (903)
T KOG1027|consen  582 LELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKP  634 (903)
T ss_pred             ehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCC
Confidence            99996 7999999653  1111111334567889999999999   89999999998

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.38  E-value=1.8e-12  Score=130.08  Aligned_cols=130  Identities=22%  Similarity=0.299  Sum_probs=109.1

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-----C---CcccceeeEEeeccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-----H---VNLVALRGYCIATTQ  361 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-----H---~NIV~l~g~~~~~~~  361 (425)
                      .+|...++||=|.|.+||.+. ..+.+.||+|+.+... .-.+.-+.||++|.+++     |   ..||+|+.++....+
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            568888999999999999997 4567899999998643 23456788999999884     3   369999999987766


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       .+....+|+|++ +-+|..++....-+-++.....+|+.||+.||.|||..|  +|||-||||
T Consensus       157 -NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKP  216 (590)
T KOG1290|consen  157 -NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKP  216 (590)
T ss_pred             -CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCc
Confidence             677899999999 568888887766667999999999999999999999644  899999998

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.37  E-value=4.5e-14  Score=132.45  Aligned_cols=126  Identities=27%  Similarity=0.372  Sum_probs=99.8

Q ss_pred             ccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          294 SRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ..++.||-|.||.||.... +||+.||.|++.+...  ...+.+.+|+.+|.-.+|.|++..+..........-.+.|++
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            3457899999999999884 5799999999975322  234678999999999999999998887653322223456888


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|.|. .+|...+.+  ...|+-....-+..||.+||.|||   +.+|.||||||
T Consensus       136 TELmQ-SDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKP  184 (449)
T KOG0664|consen  136 TELMQ-SDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKP  184 (449)
T ss_pred             HHHHH-hhhhheecc--CCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCC
Confidence            89885 577666643  346888888889999999999999   99999999998

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.36  E-value=1.3e-13  Score=142.51  Aligned_cols=124  Identities=28%  Similarity=0.383  Sum_probs=107.0

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|.....+|.|.||.|||++ ...++..|||.++-.......-...|+-+++..+|+|||.++|-+.     .....++
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsyl-----r~dklwi   89 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYL-----RRDKLWI   89 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhh-----hhcCcEE
Confidence            456666889999999999998 5678999999998655555566778999999999999999999887     4556799


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      .|||+-+|+|.+..+..  .+|+..+.-.+.+...+||.|||   ..+-+|||||
T Consensus        90 cMEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylh---s~gk~hRdiK  139 (829)
T KOG0576|consen   90 CMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIK  139 (829)
T ss_pred             EEEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhh---cCCccccccc
Confidence            99999999999877643  46888898899999999999999   9999999998

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.34  E-value=3e-12  Score=118.03  Aligned_cols=121  Identities=18%  Similarity=0.209  Sum_probs=89.2

Q ss_pred             HHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCcc----------------------chHHHHHHHHHHh
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA----------------------GDATFKHEVEVIA  342 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~----------------------~~~~f~~Ev~il~  342 (425)
                      ++...-..+...+.||+|+||.||++...+|+.||||++......                      ....+..|..++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            344433346667899999999999999888999999987532200                      0123677899999


Q ss_pred             hCCCCc--ccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 048791          343 SVRHVN--LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFH  420 (425)
Q Consensus       343 ~l~H~N--IV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiH  420 (425)
                      ++.|++  +...++.         ...++||||+++++|.+....        .....++.++++++.++|   ..+|+|
T Consensus        89 ~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh---~~gi~H  148 (198)
T cd05144          89 ALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAY---KHGIIH  148 (198)
T ss_pred             HHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHH---HCCCCc
Confidence            998874  3343332         234899999999998765420        234578899999999999   799999


Q ss_pred             cCCCC
Q 048791          421 RDIKA  425 (425)
Q Consensus       421 RDLKp  425 (425)
                      |||||
T Consensus       149 ~Dl~p  153 (198)
T cd05144         149 GDLSE  153 (198)
T ss_pred             CCCCc
Confidence            99997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.34  E-value=5.8e-12  Score=118.64  Aligned_cols=122  Identities=15%  Similarity=0.135  Sum_probs=94.6

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchH---H------HHHHHHHHhhCCCCcccceeeEEeecc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDA---T------FKHEVEVIASVRHVNLVALRGYCIATT  360 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~---~------f~~Ev~il~~l~H~NIV~l~g~~~~~~  360 (425)
                      .++|...+++|+|+||.||.... ++..+|||.+.........   .      |.+|+..+.+++|++|..+..+.....
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            46789999999999999999665 5778999999753322221   2      688999999999999999988755321


Q ss_pred             c---cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 Q---LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~---~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .   ......+|||||+++.+|.++..      ++.    ....+++.+|..+|   ..+++|||+||
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp  163 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLH---QHGMVSGDPHK  163 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHH---HcCCccCCCCh
Confidence            1   01346799999999999988741      222    34569999999999   99999999997

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.34  E-value=5.6e-12  Score=125.19  Aligned_cols=126  Identities=25%  Similarity=0.276  Sum_probs=99.7

Q ss_pred             CcccceeecccCcccEEeeecCC--CCeeEEeeecCCCccchHHHHHHHHHHhhCCC----CcccceeeEEeeccccCCc
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPD--GSEVALKRFKNCSAAGDATFKHEVEVIASVRH----VNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~--g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H----~NIV~l~g~~~~~~~~~~~  365 (425)
                      +|...+.||+|+||.||++.-..  ...+|+|............+..|+.++..+.+    +++..++.....    .+.
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~----~~~   94 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRS----TED   94 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccC----CCc
Confidence            78889999999999999998543  24788887765433333368889999998873    466666665521    455


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||+.. +-+|.+.......+.++-.+.++|+.|+..+|+|||   +.++|||||||
T Consensus        95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp  150 (322)
T KOG1164|consen   95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKP  150 (322)
T ss_pred             eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCH
Confidence            789999977 689998775544567999999999999999999999   99999999997

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.32  E-value=1.4e-12  Score=118.26  Aligned_cols=127  Identities=22%  Similarity=0.346  Sum_probs=102.2

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCC-CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC-SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +++.....||+|++|.|-|-+ ..+|+..|||++... ..+..+..+.|+++..+. ..|.+|.++|...     .....
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~-----regdv  120 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF-----REGDV  120 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh-----ccccE
Confidence            334445679999999987766 457999999999743 345567788999887655 6899999999765     55678


Q ss_pred             EEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++.||.|. -||+.+-..  .....+++...-+||..|.+||.|||  .+..|||||+||
T Consensus       121 wIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~--~kL~vIHRDvKP  177 (282)
T KOG0984|consen  121 WICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLH--SKLSVIHRDVKP  177 (282)
T ss_pred             EEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHH--HHhhhhhccCCc
Confidence            99999996 688766544  34567899999999999999999999  588999999998

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.30  E-value=4e-13  Score=125.87  Aligned_cols=123  Identities=24%  Similarity=0.344  Sum_probs=99.1

Q ss_pred             cceeecccCcccEEeeec-CCCCeeEEeeecCC-CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          295 RDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ....||.|.||+|+|-.. +.|+.+|||++... .....++++.|.+...+- .-||||+++|.+.     .++..++-|
T Consensus        68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F-----~EGdcWiCM  142 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF-----SEGDCWICM  142 (361)
T ss_pred             HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh-----cCCceeeeH
Confidence            346699999999999875 57999999999743 335567899999887766 5899999999986     456789999


Q ss_pred             ecCCCCCHHHHH---hcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHL---FASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L---~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |.|. .|++.+.   ++.....+++...-.|..-+.+||.||.+  ...||||||||
T Consensus       143 ELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKP  196 (361)
T KOG1006|consen  143 ELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKP  196 (361)
T ss_pred             HHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCCh
Confidence            9996 5765543   23334568888888999999999999983  67899999998

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=1.6e-12  Score=124.75  Aligned_cols=125  Identities=22%  Similarity=0.276  Sum_probs=103.2

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHH---HHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT---FKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~---f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...++||+|.||+|-.++ -.+|+.+|+|++++.--...++   -+.|-.+|.+.+||.+..|.-.+.     ..+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ-----t~d  241 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ-----TQD  241 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc-----cCc
Confidence            3568888999999999998887 4579999999998644332233   356889999999999988865554     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      ....||||..+|.|..||.  +.+.++......+...|..||.|||   +.+||.||||
T Consensus       242 rlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlK  295 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLK  295 (516)
T ss_pred             eEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhh---hCCeeeeech
Confidence            7899999999999998884  3456888888889999999999999   8999999998

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.29  E-value=1.7e-11  Score=105.58  Aligned_cols=113  Identities=17%  Similarity=0.113  Sum_probs=92.0

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCC--CcccceeeEEeeccccCCceEEEEEec
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRH--VNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H--~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      .+.||+|.++.||++...+ ..++||.......  ...+.+|+.++..++|  .++.+++++..     ..+..++++||
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-----~~~~~~~v~e~   74 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGE-----SDGWSYLLMEW   74 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-----CCCccEEEEEe
Confidence            4679999999999999754 7899999865433  4578999999999986  48888887765     34578999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++.+..+         ++..+..++.+++++|++||.....+++|||+||
T Consensus        75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~  117 (155)
T cd05120          75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHP  117 (155)
T ss_pred             cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCc
Confidence            998776543         6677888999999999999954446899999986

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.28  E-value=1.1e-11  Score=114.99  Aligned_cols=129  Identities=24%  Similarity=0.377  Sum_probs=103.0

Q ss_pred             HHHHHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCC-CcccceeeEEeeccc
Q 048791          284 DDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRH-VNLVALRGYCIATTQ  361 (425)
Q Consensus       284 ~ei~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H-~NIV~l~g~~~~~~~  361 (425)
                      +++..+ .+|...+.||.|+||.+|.|. +.+|..||||.=...  ........|..+...++| ..|..+.-|..    
T Consensus         9 ~~~iv~-gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~----   81 (341)
T KOG1163|consen    9 EELIVG-GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGT----   81 (341)
T ss_pred             hhheec-cceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhcc----
Confidence            344333 468888999999999999998 678999999986432  223467789999999986 46777766665    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +++...+|||.+ +-||++.+. --.+.++..+.+.+|-|+..-++|+|   ..++|||||||
T Consensus        82 -e~~ynvlVMdLL-GPsLEdLfn-fC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKP  139 (341)
T KOG1163|consen   82 -EKDYNVLVMDLL-GPSLEDLFN-FCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKP  139 (341)
T ss_pred             -ccccceeeeecc-CccHHHHHH-HHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCc
Confidence             677789999988 578887653 23456899999999999999999999   99999999998

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.23  E-value=1.9e-11  Score=111.02  Aligned_cols=115  Identities=15%  Similarity=0.221  Sum_probs=77.2

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCcc--chHHH----------------------HHHHHHHhhCCCCc--c
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA--GDATF----------------------KHEVEVIASVRHVN--L  349 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~--~~~~f----------------------~~Ev~il~~l~H~N--I  349 (425)
                      .+.||+|+||.||++...+|+.||||.+......  ....+                      ..|.+.+.++++..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            3679999999999999888999999998653211  11111                      24555555554433  3


Q ss_pred             cceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       350 V~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      .+.+++         ...++||||++++.+.........  .. .....++.+++.++.++|   . .+|+||||||
T Consensus        82 ~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p  143 (187)
T cd05119          82 PKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY---REAGLVHGDLSE  143 (187)
T ss_pred             CceEec---------CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCCh
Confidence            333332         135899999998554322111110  11 566789999999999999   6 8999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.2e-11  Score=116.34  Aligned_cols=124  Identities=15%  Similarity=0.271  Sum_probs=97.7

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +.|...+.+|+|.||.+..++.+ ..+.+++|.+.... ...++|.+|..---.| .|.||+.-+.....    ..+..+
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFq----t~d~Yv   98 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQ----TSDAYV   98 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhh----cCceEE
Confidence            34677789999999999999864 56789999886422 2346899988665555 48999876554332    234678


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||+|.|+|.+-+..   ..+.+..-.+++.|++.|+.|||   +..+||||||.
T Consensus        99 F~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~  149 (378)
T KOG1345|consen   99 FVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKA  149 (378)
T ss_pred             EeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhh---ccchhhccccc
Confidence            89999999999988743   34778888899999999999999   99999999995

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.20  E-value=2.5e-11  Score=118.79  Aligned_cols=126  Identities=24%  Similarity=0.317  Sum_probs=103.1

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-C-Cc----ccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-H-VN----LVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H-~N----IV~l~g~~~~~~~~  362 (425)
                      +++|.....+|+|.||.|.+... ..+..||||+++..... .+.-+-|++++.++. + |+    .|.+.+|+.     
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd-----  161 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFD-----  161 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh-----
Confidence            66788889999999999999873 34789999999864332 345678999999993 2 22    556666654     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      -.+...||+|.| +-|+.++|..++-.+++..+...|+.|++++++|||   +..++|-||||
T Consensus       162 yrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKP  220 (415)
T KOG0671|consen  162 YRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKP  220 (415)
T ss_pred             ccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCCh
Confidence            456778999988 349999998777778999999999999999999999   99999999998

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.18  E-value=3.2e-10  Score=107.89  Aligned_cols=123  Identities=28%  Similarity=0.366  Sum_probs=102.0

Q ss_pred             cccceeecccCcccEEeeecCCCCeeEEeeecCCCcc---chHHHHHHHHHHhhCCCC-cccceeeEEeeccccCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA---GDATFKHEVEVIASVRHV-NLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~---~~~~f~~Ev~il~~l~H~-NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      |.....||.|+||.||++...  ..+++|.+......   ....|.+|+.+++.+.|+ +++++.....     .....+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~   74 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSLY   74 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEEE
Confidence            455678999999999999976  78999999753322   367899999999999988 7999999884     344479


Q ss_pred             EEEecCCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~-~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++||+.++++.+++..... ..++......+..+++.++.|+|   ..+++|||+||
T Consensus        75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp  129 (384)
T COG0515          75 LVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKP  129 (384)
T ss_pred             EEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            99999999999977644221 26889999999999999999999   88899999996

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.14  E-value=3.4e-11  Score=113.43  Aligned_cols=120  Identities=20%  Similarity=0.347  Sum_probs=96.0

Q ss_pred             eeecccCcccEEeeec-CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEEEEec
Q 048791          297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-AGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      ..||.|..|+|+|..+ .+|..+|||.+..... ...+..+..++++.+-. .|.||+.+||++.     +...++.||.
T Consensus        98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-----n~dV~IcMel  172 (391)
T KOG0983|consen   98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-----NTDVFICMEL  172 (391)
T ss_pred             HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-----CchHHHHHHH
Confidence            5599999999999985 4689999999976443 44567888888887765 7999999999985     4456889999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |. ...+..| ..-.+++++...-++..-+.+||.||.  .+.+|||||+||
T Consensus       173 Ms-~C~ekLl-krik~piPE~ilGk~tva~v~AL~YLK--eKH~viHRDvKP  220 (391)
T KOG0983|consen  173 MS-TCAEKLL-KRIKGPIPERILGKMTVAIVKALYYLK--EKHGVIHRDVKP  220 (391)
T ss_pred             HH-HHHHHHH-HHhcCCchHHhhhhhHHHHHHHHHHHH--HhcceeecccCc
Confidence            94 3344444 444556888888899999999999998  378999999998

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=5.4e-11  Score=114.66  Aligned_cols=125  Identities=22%  Similarity=0.258  Sum_probs=105.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ..+|....+||+|+|.+|..+.+ .+.+.+|+|++++..   ..+......|-.++... .||.+|.|..++.     .+
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq-----te  323 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ-----TE  323 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc-----cc
Confidence            45788899999999999999985 467899999997532   23345667788888777 5999999998886     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      ...+.|.||.++|+|-.++..  .++|+......+..+|.-||.|||   +.+||.||||
T Consensus       324 srlffvieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~flh---~rgiiyrdlk  378 (593)
T KOG0695|consen  324 SRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLK  378 (593)
T ss_pred             ceEEEEEEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeecc
Confidence            678999999999999887753  457999999999999999999999   9999999998

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.13  E-value=7.5e-11  Score=122.08  Aligned_cols=121  Identities=21%  Similarity=0.319  Sum_probs=97.6

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +..|.....+|+|+|+.|-.+. .++++..+||++....    .+-.+|+.++... +|+|++++.+.+.     ++.+.
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~-----~~~~~  391 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYE-----DGKEI  391 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceec-----CCcee
Confidence            3445556679999999998887 5678999999997642    1234577777766 5999999999987     67789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|||++.+|-+.+.++...   ..-..+..|+.+|+.++.|||   ..+||||||||
T Consensus       392 ~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp  443 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLH---EQGVVHRDLKP  443 (612)
T ss_pred             eeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHH---hcCeeecCCCh
Confidence            99999999998888886532   222677789999999999999   89999999997

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.10  E-value=4.5e-10  Score=104.14  Aligned_cols=110  Identities=11%  Similarity=0.055  Sum_probs=83.4

Q ss_pred             ccceeecccCcccEEeeecCCCCeeEEeeecCCCcc----chHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEE
Q 048791          294 SRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA----GDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~----~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .....|++|+||+||...- ++..++.+.+.....-    ....|.+|+++|.+++ |+++++++++.         ..+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~~   74 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GRH   74 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CEE
Confidence            3457899999999996655 6778887777643321    1125789999999995 57899998862         259


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDI-KA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDL-Kp  425 (425)
                      ++|||+++.+|.+.+..         ....+..+++++|.|+|   ..+|||||| ||
T Consensus        75 lvmeyI~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp  120 (218)
T PRK12274         75 LDRSYLAGAAMYQRPPR---------GDLAYFRAARRLLQQLH---RCGVAHNDLAKE  120 (218)
T ss_pred             EEEeeecCccHHhhhhh---------hhHHHHHHHHHHHHHHH---HCcCccCCCCCc
Confidence            99999999888654311         11357789999999999   999999999 65

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.10  E-value=6.4e-10  Score=105.93  Aligned_cols=118  Identities=15%  Similarity=0.190  Sum_probs=86.6

Q ss_pred             ceeec-ccCcccEEeeecCCCCeeEEeeecCCC-------------ccchHHHHHHHHHHhhCCCCcc--cceeeEEeec
Q 048791          296 DNIIG-RGGYGNVYKGLLPDGSEVALKRFKNCS-------------AAGDATFKHEVEVIASVRHVNL--VALRGYCIAT  359 (425)
Q Consensus       296 ~~~IG-~G~fG~Vykg~l~~g~~VAVK~l~~~~-------------~~~~~~f~~Ev~il~~l~H~NI--V~l~g~~~~~  359 (425)
                      ..+|| .||.|+||+.... +..++||+.....             ......+.+|++++.+++|+++  ++.+++....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            36788 7999999999874 6788998875311             1122467889999999998885  6777775432


Q ss_pred             cccCCceEEEEEecCCC-CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKN-GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~-GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .. .....++|+||+++ .+|.+++..   ..++..    ...+|+++|.+||   +.+|+||||||
T Consensus       115 ~~-~~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp  170 (239)
T PRK01723        115 HG-LFYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFH---DAGVYHADLNA  170 (239)
T ss_pred             cC-cceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHH---HCCCCCCCCCc
Confidence            11 11234699999997 699888843   235443    3568999999999   99999999997

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.09  E-value=9.6e-11  Score=128.64  Aligned_cols=126  Identities=22%  Similarity=0.287  Sum_probs=95.7

Q ss_pred             HHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC---CCcccceeeEEeeccccC
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR---HVNLVALRGYCIATTQLE  363 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~---H~NIV~l~g~~~~~~~~~  363 (425)
                      +.....|.+.+.||+|+||+||+|.-.+|+.||+|.-+....   -+|.-=.+++.+|+   -+.|..+.....     .
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~-----~  765 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHV-----F  765 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHc-----c
Confidence            334456778899999999999999988899999998765322   13333344555555   122333322222     3


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+.-+||+||.+-|+|.+++.  ..+.++|...+.|+.++++-++.||   ..+|||+||||
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKP  822 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKP  822 (974)
T ss_pred             CCcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCc
Confidence            445699999999999999995  4567999999999999999999999   99999999998

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.08  E-value=5.9e-11  Score=117.13  Aligned_cols=129  Identities=26%  Similarity=0.273  Sum_probs=101.6

Q ss_pred             HHHHHhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccc---hHHHHHHHHHHhhC-CCCcccceeeEEeec
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAG---DATFKHEVEVIASV-RHVNLVALRGYCIAT  359 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~---~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~  359 (425)
                      +..+++ +|.-..+||+|+||+|..+.-. +.+.+|||++++.--..   .+--+.|-.+|+-- +-|.+|.|..++.  
T Consensus       344 d~i~~t-DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQ--  420 (683)
T KOG0696|consen  344 DRIKAT-DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQ--  420 (683)
T ss_pred             cceeec-ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhh--
Confidence            333443 5777899999999999999853 45789999998643211   22335677777766 5778999988876  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                         ..+..|.||||+.+|+|-.++..-  +.+-++....+|.+||-||-|||   +.+||.||||
T Consensus       421 ---TmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLK  477 (683)
T KOG0696|consen  421 ---TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLK  477 (683)
T ss_pred             ---hhhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhh---cCCeeeeecc
Confidence               456789999999999999888653  35778888999999999999999   9999999998

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.07  E-value=4.4e-10  Score=108.57  Aligned_cols=122  Identities=24%  Similarity=0.333  Sum_probs=98.2

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +|..+++||+|.||.++.|+ +-+++.||||.=...+  ...++..|-...+.|. -++|...+-|-.     ++....|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGq-----eG~~NiL  101 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQ-----EGKYNIL  101 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeecc-----ccchhhh
Confidence            58889999999999999998 6689999999754322  2345666777777764 577777766544     6677899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+|.+ +-||+|.. +--.+.++..+...||+|+..-++|+|   ...+|.|||||
T Consensus       102 VidLL-GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKP  152 (449)
T KOG1165|consen  102 VIDLL-GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKP  152 (449)
T ss_pred             hhhhh-CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCc
Confidence            99988 57888754 444557999999999999999999999   99999999998

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=7.1e-11  Score=119.16  Aligned_cols=124  Identities=19%  Similarity=0.226  Sum_probs=102.4

Q ss_pred             CcccceeecccCcccEEeeecCC-CCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++.....||-||||.|=...... ...+|+|.+++.   +....+-..+|-.+|.+.+.+.||+|+--+.     +....
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr-----d~kyv  495 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR-----DSKYV  495 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc-----cchhh
Confidence            34445679999999998877643 235899988753   2333455778999999999999999988776     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |++||-|-+|.|...|++  ++.++..+...++..+.+|++|||   .++||.|||||
T Consensus       496 YmLmEaClGGElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKP  548 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRD--RGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKP  548 (732)
T ss_pred             hhhHHhhcCchhhhhhhh--cCCcccchhhhhHHHHHHHHHHHH---hcCceeccCCh
Confidence            999999999999999965  457899999999999999999999   99999999998

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.98  E-value=3.3e-10  Score=108.83  Aligned_cols=124  Identities=22%  Similarity=0.304  Sum_probs=94.3

Q ss_pred             cccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCCceEE
Q 048791          293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEGHQRI  368 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~~~~~  368 (425)
                      |.....+|.|.- .|..+. .-.++.||+|++...  .....+...+|..++..+.|+|+++++.++.-... .+..+.|
T Consensus        19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y   97 (369)
T KOG0665|consen   19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVY   97 (369)
T ss_pred             eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHH
Confidence            444455676655 344433 224789999988531  22334567789999999999999999998864433 2345679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||||. ++|...++.    .++-.+...|..|+..|+.|||   +.+|+||||||
T Consensus        98 ~v~e~m~-~nl~~vi~~----elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkP  146 (369)
T KOG0665|consen   98 LVMELMD-ANLCQVILM----ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKP  146 (369)
T ss_pred             HHHHhhh-hHHHHHHHH----hcchHHHHHHHHHHHHHHHHHH---hcceeecccCc
Confidence            9999996 789888863    4788888999999999999999   99999999998

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.93  E-value=2.6e-09  Score=110.48  Aligned_cols=122  Identities=18%  Similarity=0.247  Sum_probs=81.8

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCccc----------------------------------------h
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAG----------------------------------------D  331 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~----------------------------------------~  331 (425)
                      .|. .+.||.|++|+||+|++.+|+.||||+.+......                                        +
T Consensus       119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  197 (437)
T TIGR01982       119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE  197 (437)
T ss_pred             hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence            344 36899999999999999999999999986532100                                        0


Q ss_pred             HHHHHHHHHHhhC----CCCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHH-H
Q 048791          332 ATFKHEVEVIASV----RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR-G  406 (425)
Q Consensus       332 ~~f~~Ev~il~~l----~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~-g  406 (425)
                      -+|.+|...+.++    +|.+-|.+-..+..    .....+|||||+++++|.+....... ..   .+.+++..+++ .
T Consensus       198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~  269 (437)
T TIGR01982       198 LDLRREAANASELGENFKNDPGVYVPEVYWD----RTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSF  269 (437)
T ss_pred             HCHHHHHHHHHHHHHhcCCCCCEEeCCEehh----hcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHH
Confidence            1355566555554    33333443333332    23357999999999999887643211 12   34567777766 4


Q ss_pred             HHHHhcCCCCCeeecCCCC
Q 048791          407 LAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       407 L~YLH~~~~~~IiHRDLKp  425 (425)
                      +..+|   ..+++|+|+||
T Consensus       270 l~ql~---~~g~~H~D~hP  285 (437)
T TIGR01982       270 LNQVL---RDGFFHADLHP  285 (437)
T ss_pred             HHHHH---hCCceeCCCCc
Confidence            67888   88999999997

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.89  E-value=4.5e-10  Score=105.84  Aligned_cols=109  Identities=23%  Similarity=0.411  Sum_probs=91.1

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      .+|.+...|..|+|++. |..+++|+++-.  .....++|..|.-.|+-+.||||..++|.|..     .....++..||
T Consensus       196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-----ppnlv~isq~m  269 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-----PPNLVIISQYM  269 (448)
T ss_pred             hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-----CCCceEeeeec
Confidence            45788889999999985 455666777532  22334678999999999999999999999973     45678999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      |-|||...|++...-.++-.+.++++.+||+||+|||
T Consensus       270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflh  306 (448)
T KOG0195|consen  270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLH  306 (448)
T ss_pred             cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHh
Confidence            9999999999876667899999999999999999999

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.58  E-value=1.3e-07  Score=84.20  Aligned_cols=110  Identities=11%  Similarity=0.046  Sum_probs=76.9

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCccc-ceeeEEeeccccCCceEEEEEecCC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV-ALRGYCIATTQLEGHQRIIVCDLMK  375 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV-~l~g~~~~~~~~~~~~~~LV~Ey~~  375 (425)
                      +.|+.|.++.||+.... |..|++|....... ....+.+|++++..+.+.+++ +++.+.       ....++||||++
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~e~i~   74 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLITEFIE   74 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEEEecC
Confidence            56889999999999864 77899998764322 233568899999988766654 444432       123489999999


Q ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCC
Q 048791          376 NGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA--QPAIFHRDIKA  425 (425)
Q Consensus       376 ~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~--~~~IiHRDLKp  425 (425)
                      +.++.+..          .....+..+++++|+.||...  ...++|+|+||
T Consensus        75 G~~l~~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~  116 (170)
T cd05151          75 GSELLTED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLP  116 (170)
T ss_pred             CCcccccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCc
Confidence            98875420          111345678999999999322  22369999986

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.53  E-value=2.1e-07  Score=94.72  Aligned_cols=135  Identities=19%  Similarity=0.215  Sum_probs=103.8

Q ss_pred             ccccHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC------CCcccc
Q 048791          279 VRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR------HVNLVA  351 (425)
Q Consensus       279 ~~f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~------H~NIV~  351 (425)
                      .++.+.|+.  -..|......|+|-|++|.+|.- ..|+.||||++.+... ..+.=+.|+++|.+|.      -.+.++
T Consensus       422 Yrv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclr  498 (752)
T KOG0670|consen  422 YRVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLR  498 (752)
T ss_pred             EEEehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence            345556554  34577777899999999999984 4588999999986322 1234467999999994      236788


Q ss_pred             eeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       352 l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+-.+.     ..+..+||+|-+. -+|.+.|..-+ .-.|.......++.|+.-||..|.   .-+|+|.||||
T Consensus       499 l~r~F~-----hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKP  564 (752)
T KOG0670|consen  499 LFRHFK-----HKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKP  564 (752)
T ss_pred             HHHHhh-----hcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCc
Confidence            877665     5678899999775 68999886532 234777888899999999999999   89999999998

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.48  E-value=3.4e-07  Score=96.52  Aligned_cols=124  Identities=15%  Similarity=0.148  Sum_probs=72.1

Q ss_pred             hcCcccceeecccCcccEEeeecCC-CCeeEEeeecCCCcc----------------------------------ch---
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAA----------------------------------GD---  331 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~-g~~VAVK~l~~~~~~----------------------------------~~---  331 (425)
                      ..+|+. +.||.|++|+||++++.+ |+.||||++...-..                                  ..   
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            345665 789999999999999877 999999998643100                                  00   


Q ss_pred             ---HHHHHHHHHHhhCC----CCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHH
Q 048791          332 ---ATFKHEVEVIASVR----HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTA  404 (425)
Q Consensus       332 ---~~f~~Ev~il~~l~----H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia  404 (425)
                         -+|.+|..-+.+++    +.+.+.+-..+++    -....+|||||++++.+.+.-.-.. ...+   +..++...+
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d----~st~~VLvmE~i~G~~l~d~~~l~~-~g~d---~~~la~~~v  269 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWD----YCSETVMVMERMYGIPVSDVAALRA-AGTD---MKLLAERGV  269 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecc----cCCCceEEEeeecCccHHhHHHHHh-cCCC---HHHHHHHHH
Confidence               12344444444442    3333433333321    1345789999999999987432111 1122   122322222


Q ss_pred             HH-HHHHhcCCCCCeeecCCCC
Q 048791          405 RG-LAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       405 ~g-L~YLH~~~~~~IiHRDLKp  425 (425)
                      +. +.-++   ..+++|+|+||
T Consensus       270 ~~~~~Qif---~~GffHaDpHP  288 (537)
T PRK04750        270 EVFFTQVF---RDGFFHADMHP  288 (537)
T ss_pred             HHHHHHHH---hCCeeeCCCCh
Confidence            21 12223   57999999997

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.44  E-value=1.2e-07  Score=105.42  Aligned_cols=78  Identities=12%  Similarity=0.026  Sum_probs=60.0

Q ss_pred             hCCC-CcccceeeEEeecc--ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 048791          343 SVRH-VNLVALRGYCIATT--QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIF  419 (425)
Q Consensus       343 ~l~H-~NIV~l~g~~~~~~--~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~Ii  419 (425)
                      .++| .||+++++++....  ..+....+.++||++ ++|.++|... ...+++...+.|+.||++||+|||   +.+||
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~gIv  102 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAH---SQGIV  102 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence            3455 58888888763211  112345677889884 6999999643 345999999999999999999999   89999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      ||||||
T Consensus       103 HrDlKP  108 (793)
T PLN00181        103 VHNVRP  108 (793)
T ss_pred             eccCCc
Confidence            999998

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.24  E-value=4.1e-06  Score=77.41  Aligned_cols=111  Identities=19%  Similarity=0.195  Sum_probs=84.6

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCC--cccceeeEEeeccccCCceEEEEEec
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHV--NLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~--NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      +.|+.|..+.||+....+|+.+++|....... .....+.+|.+++..+++.  ++.+++.+.....  ..+..++||||
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e~   81 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVMER   81 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEEE
Confidence            56899999999999987778999998764322 2345789999999999764  4567777754211  11345899999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      +++.++.+.+..   ..++..++..++.++++.|.+||.
T Consensus        82 i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          82 VDGRVLRDRLLR---PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             eCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            999888765521   357889999999999999999994

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.19  E-value=1.1e-06  Score=87.12  Aligned_cols=74  Identities=20%  Similarity=0.312  Sum_probs=59.1

Q ss_pred             CCCcccceeeEEeeccc----------------------cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHH
Q 048791          345 RHVNLVALRGYCIATTQ----------------------LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALG  402 (425)
Q Consensus       345 ~H~NIV~l~g~~~~~~~----------------------~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~  402 (425)
                      +|||||++.+++.++-.                      .++...|+||.-.+ -+|.+|+...   ..+...+.-|..|
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~---~~s~r~~~~~laQ  349 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR---HRSYRTGRVILAQ  349 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC---CCchHHHHHHHHH
Confidence            69999999998765311                      23456789988775 6899999653   4666777788999


Q ss_pred             HHHHHHHHhcCCCCCeeecCCCC
Q 048791          403 TARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       403 ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.+|+.|||   +.+|.|||+|+
T Consensus       350 lLEav~hL~---~hgvAhRDlKS  369 (598)
T KOG4158|consen  350 LLEAVTHLH---KHGVAHRDLKS  369 (598)
T ss_pred             HHHHHHHHH---Hccchhhcccc
Confidence            999999999   99999999995

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.15  E-value=1.5e-05  Score=73.50  Aligned_cols=114  Identities=15%  Similarity=0.145  Sum_probs=77.9

Q ss_pred             eeecccCcccEEeeecCC-------CCeeEEeeecCCCc----------------------cchHHH----HHHHHHHhh
Q 048791          297 NIIGRGGYGNVYKGLLPD-------GSEVALKRFKNCSA----------------------AGDATF----KHEVEVIAS  343 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~-------g~~VAVK~l~~~~~----------------------~~~~~f----~~Ev~il~~  343 (425)
                      ..||.|.-+.||.|.-.+       +..+|||..+....                      ...+.+    .+|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998543       47999997642110                      001122    378999998


Q ss_pred             CCC--CcccceeeEEeeccccCCceEEEEEecCCCCCHHH-HHhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCee
Q 048791          344 VRH--VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYD-HLFASNGPKLSWPLRQSIALGTARGLAYL-HFGAQPAIF  419 (425)
Q Consensus       344 l~H--~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~-~L~~~~~~~L~~~~r~~Ia~~ia~gL~YL-H~~~~~~Ii  419 (425)
                      ++.  -++.+++++-         ..+|||||+.++.+.. .+.+   ..++..+...+..+++.+|.+| |   ..+||
T Consensus        83 l~~~Gv~vP~pi~~~---------~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H---~~glV  147 (197)
T cd05146          83 MQKAGIPCPEVVVLK---------KHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYK---ECNLV  147 (197)
T ss_pred             HHHcCCCCCeEEEec---------CCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHH---hCCee
Confidence            853  4555666541         3589999997654422 2221   1345556677889999999999 7   78999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      |+||++
T Consensus       148 HGDLs~  153 (197)
T cd05146         148 HADLSE  153 (197)
T ss_pred             cCCCCH
Confidence            999985

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.13  E-value=1.3e-06  Score=93.78  Aligned_cols=121  Identities=20%  Similarity=0.265  Sum_probs=85.7

Q ss_pred             ccceeecccCcccEEeee-cCCCCeeEEeeec----CCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          294 SRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK----NCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~----~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ...+++|.|.+|.|+... ..+....+.|...    ...  .+....+..|..+-..++|+|++..+..+.     +...
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~-----~~~~  395 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQ-----EIDG  395 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHh-----hccc
Confidence            346889999999777765 2233334444332    111  111123566888888899999987665554     2333


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+-+|||++. +|...+...  ..+.-..+-.+..|+.+|+.|||   ..+|.|||+|+
T Consensus       396 ~~~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~  448 (601)
T KOG0590|consen  396 ILQSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKL  448 (601)
T ss_pred             chhhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHH---hcCceeccCcc
Confidence            3444999998 999888543  35888888999999999999999   99999999996

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.07  E-value=2.9e-06  Score=82.52  Aligned_cols=82  Identities=24%  Similarity=0.363  Sum_probs=67.1

Q ss_pred             HhhCCCCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 048791          341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAI  418 (425)
Q Consensus       341 l~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~I  418 (425)
                      |-.+-|.|||++..|..+....+..+...+.|||+-|++.++|++.  ....+......++..||..||.||| .|.|+|
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh-s~~Ppi  199 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH-SCDPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh-ccCCcc
Confidence            4445699999999987655443566778899999999999999763  3345777777889999999999999 789999


Q ss_pred             eecCC
Q 048791          419 FHRDI  423 (425)
Q Consensus       419 iHRDL  423 (425)
                      ||+++
T Consensus       200 ihgnl  204 (458)
T KOG1266|consen  200 IHGNL  204 (458)
T ss_pred             ccCCc
Confidence            99986

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.05  E-value=7e-06  Score=85.04  Aligned_cols=76  Identities=29%  Similarity=0.501  Sum_probs=65.6

Q ss_pred             HhhCCCCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe-e
Q 048791          341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI-F  419 (425)
Q Consensus       341 l~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~I-i  419 (425)
                      |+.++|.|+.++.|.+.     .+...++|.+|++.|+|.|.+.. ....++|.....++.+|++||+|||   ..+| .
T Consensus         1 l~~l~h~n~~~f~g~~~-----~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~   71 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASV-----DGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLH---NSPIGY   71 (484)
T ss_pred             CcccchhhhhhheeeEe-----cCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHh---cCccee
Confidence            35678999999999998     45778999999999999999976 3456999999999999999999999   4444 8


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      |+.+++
T Consensus        72 hg~l~s   77 (484)
T KOG1023|consen   72 HGALKS   77 (484)
T ss_pred             eeeecc
Confidence            988764

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.95  E-value=9.1e-05  Score=71.77  Aligned_cols=125  Identities=14%  Similarity=0.047  Sum_probs=83.7

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCc-----------cchHHHHHHHHHHhhCCCCcc--cceeeEEeeccccC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA-----------AGDATFKHEVEVIASVRHVNL--VALRGYCIATTQLE  363 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~-----------~~~~~f~~Ev~il~~l~H~NI--V~l~g~~~~~~~~~  363 (425)
                      +.+-+..-..|++..+ +|+.+.||+......           .....+.+|...+.+++..+|  ..++++........
T Consensus        28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~  106 (268)
T PRK15123         28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA  106 (268)
T ss_pred             cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence            3344333344667666 577899997643221           011247899999998854444  45566654322112


Q ss_pred             CceEEEEEecCCCC-CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNG-SVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~G-sL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....+||+|++++- +|.+++........+...+..++.++++.+.-||   ..+|+|+|+++
T Consensus       107 ~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~  166 (268)
T PRK15123        107 TRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYI  166 (268)
T ss_pred             cceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCCh
Confidence            34678999999975 8998885322234556677899999999999999   99999999985

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.87  E-value=3.9e-05  Score=74.76  Aligned_cols=131  Identities=27%  Similarity=0.319  Sum_probs=80.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCC-----------CcccceeeE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRH-----------VNLVALRGY  355 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H-----------~NIV~l~g~  355 (425)
                      ..+.....||.|+++.||.++. .+|+++|||......   ....+++.+|...+..+.+           +-++.+--.
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            3456678999999999999995 458999999875222   2334677777766655433           122221111


Q ss_pred             Eeeccc------cCCc-----eEEEEEecCCCCCHHHHHh---cCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 048791          356 CIATTQ------LEGH-----QRIIVCDLMKNGSVYDHLF---ASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIF  419 (425)
Q Consensus       356 ~~~~~~------~~~~-----~~~LV~Ey~~~GsL~~~L~---~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~Ii  419 (425)
                      -....+      .+..     ..+++|+-+. +||.+++.   ...  ...+....|+.+..|+.+-+++||   ..+||
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlV  167 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLV  167 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceE
Confidence            110000      0011     2367777774 88888753   211  123556677788899999999999   99999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      |+||||
T Consensus       168 Hgdi~~  173 (288)
T PF14531_consen  168 HGDIKP  173 (288)
T ss_dssp             EST-SG
T ss_pred             ecccce
Confidence            999986

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.83  E-value=4.4e-06  Score=91.91  Aligned_cols=122  Identities=22%  Similarity=0.290  Sum_probs=92.3

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCC-ccchHHHHHHHHH--HhhCCCCcccceeeEEeeccccCCceEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS-AAGDATFKHEVEV--IASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~-~~~~~~f~~Ev~i--l~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++...+.||.+.|=+|.+++.+.|. |+||++-+.+ ....+.|.++++-  ..-++|||.+.+.-.-.     .....|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~-----t~kAAy   97 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLV-----TDKAAY   97 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHH-----hhHHHH
Confidence            4566688999999999999998887 8899885433 4445566655543  44458999987755432     234557


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||-+|.. .+|.|-|  ..++-|..-...=|+-|+.+||.-.|   ..+|+|+|||.
T Consensus        98 lvRqyvk-hnLyDRl--STRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKs  148 (1431)
T KOG1240|consen   98 LVRQYVK-HNLYDRL--STRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKS  148 (1431)
T ss_pred             HHHHHHh-hhhhhhh--ccchHHHHHHHHHHHHHHHHHHHHHH---HcCcccccccc
Confidence            8888885 4777777  34566777778889999999999999   99999999994

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.76  E-value=0.00018  Score=65.19  Aligned_cols=121  Identities=19%  Similarity=0.237  Sum_probs=85.1

Q ss_pred             cceeecccCcccEEeeecCCCCeeEEee-ecCCCc-------cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          295 RDNIIGRGGYGNVYKGLLPDGSEVALKR-FKNCSA-------AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l~~g~~VAVK~-l~~~~~-------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ...+|-||+-+.|+++.+ .|+...||. +.+.-.       -....-.+|...+.+++--.|....-+.+     +...
T Consensus        11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~-----D~~~   84 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI-----DTYG   84 (229)
T ss_pred             cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE-----ecCC
Confidence            457899999999999998 466666663 322211       11246678999999987655544433444     2334


Q ss_pred             EEEEEecCCC-CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          367 RIIVCDLMKN-GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       367 ~~LV~Ey~~~-GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      -.|+|||.++ -++.+++...-.....-.....++..|-+-+.-||   ...|||+||-
T Consensus        85 ~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLT  140 (229)
T KOG3087|consen   85 GQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLT  140 (229)
T ss_pred             CeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeeccccc
Confidence            5799999975 48888887643333334444788999999999999   9999999984

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.68  E-value=0.0002  Score=73.85  Aligned_cols=106  Identities=23%  Similarity=0.231  Sum_probs=81.1

Q ss_pred             ccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCCC-CCHHHH
Q 048791          305 GNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKN-GSVYDH  382 (425)
Q Consensus       305 G~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~-GsL~~~  382 (425)
                      .+-||+.. .||..+..|+++....+....-..-++.++++.|.|+|+++....+... .....++||+|.|+ ++|.++
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHHHH
Confidence            45788873 4899999999953222222233456889999999999999998875443 56688999999996 788887


Q ss_pred             HhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          383 LFAS-------------NGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       383 L~~~-------------~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      .+..             .....++.....++.|++.||.++|
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH  410 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH  410 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            7642             1234778889999999999999999

>PRK09902 hypothetical protein; Provisional

Probab=97.63  E-value=0.00095  Score=62.18  Aligned_cols=122  Identities=19%  Similarity=0.124  Sum_probs=88.9

Q ss_pred             ecccCcccEEeeecCCCCeeEEeeecCC---C---ccchHHHHHHHHHHhhCCCC--cccceeeEEeeccccCCceEEEE
Q 048791          299 IGRGGYGNVYKGLLPDGSEVALKRFKNC---S---AAGDATFKHEVEVIASVRHV--NLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       299 IG~G~fG~Vykg~l~~g~~VAVK~l~~~---~---~~~~~~f~~Ev~il~~l~H~--NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      -|+||-+.|++-.+. |..+=+|+-.+.   +   ..+...|.+|...|.++...  .+.+...+...... ...+.+||
T Consensus        26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~-~~~rA~LV  103 (216)
T PRK09902         26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIE-GEWRALLV  103 (216)
T ss_pred             cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccC-CceEEEEE
Confidence            467888889987764 457888887621   1   34668999999999998643  34455533222222 34567899


Q ss_pred             EecCCC-CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKN-GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~-GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|-+++ -+|.+++.+....+.+...+..|..+||+.++-||   ..++.|+|+.+
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~  156 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYV  156 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCH
Confidence            997764 68988886544445678888999999999999999   99999999853

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.57  E-value=0.00049  Score=62.51  Aligned_cols=111  Identities=18%  Similarity=0.274  Sum_probs=78.0

Q ss_pred             eeecccCcccEEeeecCCCCeeEEee-ecCCCccc-------hHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKR-FKNCSAAG-------DATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~-l~~~~~~~-------~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ..|++|+-..+|.+.+- |..+.+|. +++.-...       .+.-.+|..++++++--.|-...-+..     +.+...
T Consensus         2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-----D~~~~~   75 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-----DPDNGL   75 (204)
T ss_pred             chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-----cCCCCE
Confidence            35789999999999764 34455553 33321111       134578999999987554443333333     455678


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+|||.++-.|.+.+...         +..++..|-+-+.-||   ..+|||+||-+
T Consensus        76 I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH---~~givHGDLTt  120 (204)
T COG3642          76 IVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLH---KAGIVHGDLTT  120 (204)
T ss_pred             EEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHH---hcCeecCCCcc
Confidence            999999999999888442         4678888888999999   99999999853

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.48  E-value=3.4e-05  Score=80.71  Aligned_cols=118  Identities=23%  Similarity=0.248  Sum_probs=90.7

Q ss_pred             eecccCcccEEeee----cCCCCeeEEeeecCCCc-cc-hHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEEE
Q 048791          298 IIGRGGYGNVYKGL----LPDGSEVALKRFKNCSA-AG-DATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       298 ~IG~G~fG~Vykg~----l~~g~~VAVK~l~~~~~-~~-~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|+|.||.|+...    .+.|..+|.|.+++... .. ......|-.++..++ |+.+|++.-...     .....+++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafq-----t~~kl~l~   75 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQ-----TDGKLYLI   75 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeec-----cccchhHh
Confidence            37999999998664    34577889998875332 11 124456888888887 999999977765     34567999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|..+|.|...+..  ...++......+...+|-+++++|   +.+|+|||+|+
T Consensus        76 ld~~rgg~lft~l~~--~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~  125 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSK--EVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKL  125 (612)
T ss_pred             hhhcccchhhhcccc--CCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccc
Confidence            999999999887743  345667777777888999999999   99999999985

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.38  E-value=0.00068  Score=71.84  Aligned_cols=98  Identities=16%  Similarity=0.160  Sum_probs=73.3

Q ss_pred             cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCC
Q 048791          312 LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKL  391 (425)
Q Consensus       312 l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L  391 (425)
                      ..++.+|.|...+...........+-+..|+.+|||||++++....     +.+..|||.|-+  .-|..++..     +
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e-----~~~~~ylvTErV--~Pl~~~lk~-----l  101 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTE-----EEGTLYLVTERV--RPLETVLKE-----L  101 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhc-----ccCceEEEeecc--ccHHHHHHH-----h
Confidence            4578899999887655522344567788999999999999998776     455789999988  467777743     2


Q ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 048791          392 SWPLRQSIALGTARGLAYLHFGAQPAIFHRDI  423 (425)
Q Consensus       392 ~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDL  423 (425)
                      .-....-.+.||++||.|||+  +..++|++|
T Consensus       102 ~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv  131 (690)
T KOG1243|consen  102 GKEEVCLGLFQILAALSFLND--DCNLVHGNV  131 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc--cCCeeeccE
Confidence            233334457899999999995  457899987

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.37  E-value=0.00013  Score=76.12  Aligned_cols=128  Identities=20%  Similarity=0.136  Sum_probs=94.3

Q ss_pred             HHhcCcccceeecccCcccEEeeec--CCCCeeEEeeecCCCccc--hHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL--PDGSEVALKRFKNCSAAG--DATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l--~~g~~VAVK~l~~~~~~~--~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ..+.+|.....||.|.|+.|++...  .++..+++|.+.+.....  +.--+.|+.+...+ .|.++++...-..     
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-----  336 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-----  336 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----
Confidence            3456788899999999999999874  467899999887543221  22224566666665 3777776433222     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..+.|+--||++++++...+  .....++...++.+..+++.++-|+|   ++.++|+|+||
T Consensus       337 ~~r~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~p  394 (524)
T KOG0601|consen  337 QLRQGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKP  394 (524)
T ss_pred             ccccccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhcccccc---chhhhcccccc
Confidence            345567899999999987665  22335778888899999999999999   99999999997

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.23  E-value=0.0013  Score=60.34  Aligned_cols=104  Identities=21%  Similarity=0.293  Sum_probs=64.0

Q ss_pred             cEEeeecCCCCeeEEeeecCCC--------------c-------cc-----hHHHHHHHHHHhhCCCC--cccceeeEEe
Q 048791          306 NVYKGLLPDGSEVALKRFKNCS--------------A-------AG-----DATFKHEVEVIASVRHV--NLVALRGYCI  357 (425)
Q Consensus       306 ~Vykg~l~~g~~VAVK~l~~~~--------------~-------~~-----~~~f~~Ev~il~~l~H~--NIV~l~g~~~  357 (425)
                      .||.|.-++|..||||..+...              .       ..     .....+|.+.|.++...  ++.+++.+- 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            3899998889999999764310              0       00     13467899999999866  455666543 


Q ss_pred             eccccCCceEEEEEecCC--CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCCCeeecCCCC
Q 048791          358 ATTQLEGHQRIIVCDLMK--NGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY-LHFGAQPAIFHRDIKA  425 (425)
Q Consensus       358 ~~~~~~~~~~~LV~Ey~~--~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~Y-LH~~~~~~IiHRDLKp  425 (425)
                              ...|||||++  +..+.. |.+..   ++......+..++.+.+.. +|   ..+|||+|+.+
T Consensus        80 --------~~~ivME~I~~~G~~~~~-l~~~~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~  135 (188)
T PF01163_consen   80 --------RNVIVMEYIGEDGVPLPR-LKDVD---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSE  135 (188)
T ss_dssp             --------TTEEEEE--EETTEEGGC-HHHCG---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-ST
T ss_pred             --------CCEEEEEecCCCccchhh-HHhcc---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCCh
Confidence                    2389999998  544443 32211   2234456677788886666 47   88999999853

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.10  E-value=0.0047  Score=57.29  Aligned_cols=89  Identities=19%  Similarity=0.228  Sum_probs=67.8

Q ss_pred             hHHHHHHHHHHhhCCCC--cccceeeEEeeccccCCceEEEEEecCCC-CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Q 048791          331 DATFKHEVEVIASVRHV--NLVALRGYCIATTQLEGHQRIIVCDLMKN-GSVYDHLFASNGPKLSWPLRQSIALGTARGL  407 (425)
Q Consensus       331 ~~~f~~Ev~il~~l~H~--NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~-GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL  407 (425)
                      .....+|...+..++..  ...+.+++....... ....+||+|++++ -+|.+++....  .++-..+..++.++++.+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~-~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGG-GYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC-ceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHH
Confidence            34678898888888644  455777777654332 2456899999997 47999885422  266677889999999999


Q ss_pred             HHHhcCCCCCeeecCCCC
Q 048791          408 AYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       408 ~YLH~~~~~~IiHRDLKp  425 (425)
                      +-||   ..+|+|+|+++
T Consensus       132 ~~lH---~~gi~H~Dl~~  146 (206)
T PF06293_consen  132 AKLH---DAGIYHGDLNP  146 (206)
T ss_pred             HHHH---HCcCCCCCCCc
Confidence            9999   99999999985

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.90  E-value=0.0028  Score=58.15  Aligned_cols=82  Identities=23%  Similarity=0.296  Sum_probs=62.2

Q ss_pred             HHHHHHHhhCCC-CcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          335 KHEVEVIASVRH-VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFA-SNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       335 ~~Ev~il~~l~H-~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~-~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      .+|..++..+++ +++.+++|.|=         .++|.||.+.+++...-.. ..-..-+|..|.+||.++.+.+.+|++
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG---------~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~   77 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG---------RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDH   77 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC---------CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence            458888888876 58999999993         4889999997766421000 011136899999999999999999997


Q ss_pred             CCCCCeeecCCCC
Q 048791          413 GAQPAIFHRDIKA  425 (425)
Q Consensus       413 ~~~~~IiHRDLKp  425 (425)
                      .....+.-.|+++
T Consensus        78 ~~~~~~~lcDv~~   90 (188)
T PF12260_consen   78 GPLGFFYLCDVSP   90 (188)
T ss_pred             CCCCcEEEeecch
Confidence            7666777788875

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.82  E-value=0.00031  Score=75.62  Aligned_cols=126  Identities=18%  Similarity=0.240  Sum_probs=91.6

Q ss_pred             cccceeecccCcccEEeeec--CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL--PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l--~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      |.....||+|.|+.|-....  +....+|+|.+....  ....+....|..+=..+. |+|++++++...     +.+..
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~-----~~~~~   96 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS-----SPRSY   96 (601)
T ss_pred             ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC-----CCccc
Confidence            44456699999999987764  334567777765432  111223344776666675 999999998876     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++..||..++++.+.+........+-.....+..|+..|+.|+|-  ..++.||||||
T Consensus        97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP  152 (601)
T KOG0590|consen   97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKP  152 (601)
T ss_pred             ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCC
Confidence            999999999999888732222245566667789999999999993  67899999997

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.63  E-value=0.0083  Score=63.30  Aligned_cols=119  Identities=15%  Similarity=0.154  Sum_probs=70.2

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCcc--------------------------ch----H----------HHHH
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA--------------------------GD----A----------TFKH  336 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~--------------------------~~----~----------~f~~  336 (425)
                      +.|+.++-|+||+|++.+|+.||||+....-..                          ..    +          +|.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            679999999999999999999999977542100                          00    1          2344


Q ss_pred             HHHHHhhC----CCCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          337 EVEVIASV----RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       337 Ev~il~~l----~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      |..-+.++    ++..-+++-..++.    -...+.|+|||+++-.+.+...-+. ..++   +..|+..+++..-..  
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we----~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~~q--  280 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWE----YTTRRVLTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFLRQ--  280 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehh----ccCCcEEEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHHHH--
Confidence            44444443    22222333333432    2346799999999988888753222 2344   334444444432211  


Q ss_pred             CCCCCeeecCCCC
Q 048791          413 GAQPAIFHRDIKA  425 (425)
Q Consensus       413 ~~~~~IiHRDLKp  425 (425)
                      -...++.|.|..|
T Consensus       281 ~~~dgffHaDpHp  293 (517)
T COG0661         281 LLRDGFFHADPHP  293 (517)
T ss_pred             HHhcCccccCCCc
Confidence            1135788888765

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.58  E-value=0.0081  Score=57.82  Aligned_cols=112  Identities=17%  Similarity=0.226  Sum_probs=70.1

Q ss_pred             ccceeecccCcccEEeeecCCCCeeEEeeecCC----------C------cc------chHHHHHHHHHHhhCCCC--cc
Q 048791          294 SRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNC----------S------AA------GDATFKHEVEVIASVRHV--NL  349 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~----------~------~~------~~~~f~~Ev~il~~l~H~--NI  349 (425)
                      ..++.||.|.-+.||.|..+.|.++|||.=+..          .      ..      ......+|.+.|.++.-.  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            345889999999999999999999999943211          0      00      012456788999988644  56


Q ss_pred             cceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 048791          350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK  424 (425)
Q Consensus       350 V~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLK  424 (425)
                      .+.+++         +...+||||.++--|...       +++-...-.|...|.+-+.-.-   ..+|||+|+.
T Consensus       174 P~P~~~---------nRHaVvMe~ieG~eL~~~-------r~~~en~~~il~~il~~~~~~~---~~GiVHGDlS  229 (304)
T COG0478         174 PKPIAW---------NRHAVVMEYIEGVELYRL-------RLDVENPDEILDKILEEVRKAY---RRGIVHGDLS  229 (304)
T ss_pred             CCcccc---------ccceeeeehcccceeecc-------cCcccCHHHHHHHHHHHHHHHH---HcCccccCCc
Confidence            655544         456899999987444321       1112222233333333333333   4679999985

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=96.52  E-value=0.0087  Score=55.41  Aligned_cols=125  Identities=28%  Similarity=0.348  Sum_probs=85.7

Q ss_pred             CcccccHHHHHHHhcCcccceeecccCc-ccEEeeecCCCCeeEEeeecCCC---------c------------cchHHH
Q 048791          277 NLVRFTFDDIKKATRNFSRDNIIGRGGY-GNVYKGLLPDGSEVALKRFKNCS---------A------------AGDATF  334 (425)
Q Consensus       277 ~~~~f~~~ei~~at~~f~~~~~IG~G~f-G~Vykg~l~~g~~VAVK~l~~~~---------~------------~~~~~f  334 (425)
                      ....|+.     .+.++.-.+.||.|.- |.|||.++ +|+.+|+|.++...         .            .....|
T Consensus        28 KL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF  101 (207)
T PF13095_consen   28 KLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPF  101 (207)
T ss_pred             CcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChH
Confidence            3445655     2367777899999999 99999998 57899999943210         0            011358


Q ss_pred             HHHHHHHhhCC---CCcc--cceeeEEeecc-c------------cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHH
Q 048791          335 KHEVEVIASVR---HVNL--VALRGYCIATT-Q------------LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR  396 (425)
Q Consensus       335 ~~Ev~il~~l~---H~NI--V~l~g~~~~~~-~------------~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r  396 (425)
                      ..|.+..++++   +.++  |+.+||..-+. .            .....+.||.||.+...           .+    .
T Consensus       102 ~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~----~  166 (207)
T PF13095_consen  102 NCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PL----Q  166 (207)
T ss_pred             HHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------cc----c
Confidence            89999999885   3466  89999985431 0            01224578888876433           12    2


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          397 QSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       397 ~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+-+.+|.+-|.-+|   ..+|+-+|+|+
T Consensus       167 ~~~~~~~~~dl~~~~---k~gI~~~Dv~~  192 (207)
T PF13095_consen  167 IRDIPQMLRDLKILH---KLGIVPRDVKP  192 (207)
T ss_pred             hhHHHHHHHHHHHHH---HCCeeeccCcc
Confidence            234456777788999   99999999985

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.52  E-value=0.01  Score=62.57  Aligned_cols=120  Identities=14%  Similarity=0.143  Sum_probs=69.2

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCccc-------------------------------------hHHHHHHH
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAG-------------------------------------DATFKHEV  338 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~-------------------------------------~~~f~~Ev  338 (425)
                      .+.|+.-+.|.||++++++|+.||||.-++.-...                                     +-+|.+|.
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            36799999999999999999999999775421110                                     01355555


Q ss_pred             HHHhh----CCCCcc---cceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          339 EVIAS----VRHVNL---VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       339 ~il~~----l~H~NI---V~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      +-..+    ++|-++   |++-..++.    -...+.|+||||++..+.|...-.+ ..++-.....-+.++..-+-+  
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~----~st~RVLtME~~~G~~i~Dl~~i~~-~gi~~~~i~~~l~~~~~~qIf--  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWD----LSTKRVLTMEYVDGIKINDLDAIDK-RGISPHDILNKLVEAYLEQIF--  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhh----cCcceEEEEEecCCccCCCHHHHHH-cCCCHHHHHHHHHHHHHHHHH--
Confidence            43333    345551   222223321    2346899999999987766533221 234444333333332222222  


Q ss_pred             cCCCCCeeecCCCC
Q 048791          412 FGAQPAIFHRDIKA  425 (425)
Q Consensus       412 ~~~~~~IiHRDLKp  425 (425)
                         ..+++|.|-.|
T Consensus       319 ---~~GffHaDPHP  329 (538)
T KOG1235|consen  319 ---KTGFFHADPHP  329 (538)
T ss_pred             ---hcCCccCCCCC
Confidence               34688888665

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.51  E-value=0.0026  Score=66.47  Aligned_cols=123  Identities=20%  Similarity=0.126  Sum_probs=88.8

Q ss_pred             cccceeecc--cCcccEEeeec---CCCCeeEEeeecC--CCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCC
Q 048791          293 FSRDNIIGR--GGYGNVYKGLL---PDGSEVALKRFKN--CSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       293 f~~~~~IG~--G~fG~Vykg~l---~~g~~VAVK~l~~--~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~  364 (425)
                      |.....+|.  |.+|.||++..   .++..+|+|+-+.  ...+....=.+|+....+++ |+|.|+......     ++
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e-----~~  190 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE-----GS  190 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc-----cC
Confidence            445577899  99999999986   4688999998542  22222233356777777785 999999655544     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR----GLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~----gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++-.|++. .+|.++-+... ..++......+..+..+    ||..+|   ...|+|-|+||
T Consensus       191 ~~lfiqtE~~~-~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp  250 (524)
T KOG0601|consen  191 GILFIQTELCG-ESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKP  250 (524)
T ss_pred             Ccceeeecccc-chhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccC---CCcccccccch
Confidence            67788888775 78888876532 23555556666666666    999999   99999999986

>PLN02876 acyl-CoA dehydrogenase

Probab=96.32  E-value=0.027  Score=63.14  Aligned_cols=110  Identities=16%  Similarity=0.219  Sum_probs=77.2

Q ss_pred             ceeecccCcccEEeeecCCC---CeeEEeeecCCC-ccchHHHHHHHHHHhhCC-CCcc--cceeeEEeeccccCCceEE
Q 048791          296 DNIIGRGGYGNVYKGLLPDG---SEVALKRFKNCS-AAGDATFKHEVEVIASVR-HVNL--VALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g---~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~-H~NI--V~l~g~~~~~~~~~~~~~~  368 (425)
                      ...++.|.+..+|+-...++   ..+++|+..... ......+.+|.+++..+. |.++  .+.+++|....  ..+..|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~--v~G~~f  120 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS--VIGTAF  120 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC--cCCCce
Confidence            46688899999998776554   367777765422 123357889999999995 6665  67788875422  123568


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      +||||+++..+.+    .....++..++..++.++++.|+.||
T Consensus       121 lVME~v~G~~~~~----~~~~~~~~~~r~~l~~~l~~~La~LH  159 (822)
T PLN02876        121 YIMEYLEGRIFVD----PKLPGVAPERRRAIYRATAKVLAALH  159 (822)
T ss_pred             EEEEecCCcccCC----ccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999654322    11124567778899999999999999

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.02  E-value=0.043  Score=50.54  Aligned_cols=103  Identities=17%  Similarity=0.187  Sum_probs=76.7

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCC--cccceeeEEeeccccCCceEEEEEecC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV--NLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~--NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      +.|+.|..+.||+....+ ..+++|.....  .....+.+|..++..++..  .+.+++.++....  .....+++||+.
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~--~~~~~~~~~~~i   77 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDE--FNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETE--ETSEEEEEEEEE
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeeccccc--ccccceEEEEEe
Confidence            568899999999999866 58999987543  3446778899998888543  3457776553322  233579999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      ++..+..        ..+...+..++.++++.|+-||.
T Consensus        78 ~g~~~~~--------~~~~~~~~~~~~~~~~~l~~lh~  107 (239)
T PF01636_consen   78 PGRPLDD--------ELSPEQRPELLRQLGRALAQLHQ  107 (239)
T ss_dssp             SSEEHHH--------TSTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc--------cccccccccccccchhhhhhccc
Confidence            9888876        36778888999999999999994

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK10593 hypothetical protein; Provisional

Probab=95.92  E-value=0.089  Score=51.73  Aligned_cols=105  Identities=10%  Similarity=0.066  Sum_probs=74.0

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCC---CcccceeeEEeeccccCCceEEEEEe
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRH---VNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H---~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      ...||.|..+.||+-...+++ +.+|..+..  .....|.+|.+.++.+.-   ..+.+++++|....  ..+..+||||
T Consensus        19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~--~~g~~~LVmE   93 (297)
T PRK10593         19 VECISEQPYAALWALYDSQGN-PMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ--SPGPDVLLLE   93 (297)
T ss_pred             eeecCCccceeEEEEEcCCCC-EEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCC--cCCCeEEEEe
Confidence            467999999999998766664 566664431  123478999999998853   35778888875321  2355799999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      +.+++++.+ .      ..+-..+..+...++++|+-||.
T Consensus        94 ~i~G~~~~~-~------~~~~~~~~~l~~~l~~~La~LH~  126 (297)
T PRK10593         94 RLRGVSVEA-P------ARTPERWEQLKDQIVEGLLAWHR  126 (297)
T ss_pred             ccCCEecCC-C------CCCHHHHHHHHHHHHHHHHHHhC
Confidence            999887765 1      12333455677888999999993

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.49  E-value=0.1  Score=49.87  Aligned_cols=131  Identities=16%  Similarity=0.241  Sum_probs=76.4

Q ss_pred             cccHHHHHHHhcCccccee---ecccCcccEEeeecCCCCeeEEeeecCCCc---------cchHH--------------
Q 048791          280 RFTFDDIKKATRNFSRDNI---IGRGGYGNVYKGLLPDGSEVALKRFKNCSA---------AGDAT--------------  333 (425)
Q Consensus       280 ~f~~~ei~~at~~f~~~~~---IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~---------~~~~~--------------  333 (425)
                      ..+.+.+....+.-.....   |.+|.-.+||+|.-.++..||||+.+....         +++..              
T Consensus        34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~  113 (268)
T COG1718          34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA  113 (268)
T ss_pred             hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence            3455666665555554444   556667779999988899999998864221         11111              


Q ss_pred             -HHHHHHHHhhCC--CCcccceeeEEeeccccCCceEEEEEecCCCCC-HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 048791          334 -FKHEVEVIASVR--HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGS-VYDHLFASNGPKLSWPLRQSIALGTARGLAY  409 (425)
Q Consensus       334 -f~~Ev~il~~l~--H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~Gs-L~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~Y  409 (425)
                       ..+|..-|.++.  +-.+.+-+++.         ...|||||+.... -.-.|.+   ..+.......+..++.++|.-
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~~---------~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~  181 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAFR---------NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRR  181 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceeec---------CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHH
Confidence             234555555542  33444444432         4589999996431 1111111   112222455667778888887


Q ss_pred             HhcCCCCCeeecCCC
Q 048791          410 LHFGAQPAIFHRDIK  424 (425)
Q Consensus       410 LH~~~~~~IiHRDLK  424 (425)
                      |-  +.-++||+||.
T Consensus       182 l~--~~a~LVHgDLS  194 (268)
T COG1718         182 LY--KEAGLVHGDLS  194 (268)
T ss_pred             HH--HhcCcccccch
Confidence            76  34789999984

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=95.23  E-value=0.17  Score=47.65  Aligned_cols=121  Identities=11%  Similarity=0.099  Sum_probs=72.0

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchH---------HHHHHHHHHhhCCCC---cccceeeEEee
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDA---------TFKHEVEVIASVRHV---NLVALRGYCIA  358 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~---------~f~~Ev~il~~l~H~---NIV~l~g~~~~  358 (425)
                      .+|...+++-....-.|.+-.. +|..+.+|.........++         +..+++..+.+++..   ..+.++.....
T Consensus        31 ~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ek  109 (229)
T PF06176_consen   31 NNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEK  109 (229)
T ss_pred             CCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeee
Confidence            4566666666666666666555 5678888877653322222         223445545555332   23333333222


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .........+|+|||+++..|.++.      .++.    .++..+.+.+.-||   +.++.|+|..|
T Consensus       110 k~~~~~~~~~ll~EYIeG~~l~d~~------~i~e----~~~~ki~~~ikqlH---~~G~~HGD~hp  163 (229)
T PF06176_consen  110 KIFRYTSSYVLLMEYIEGVELNDIE------DIDE----DLAEKIVEAIKQLH---KHGFYHGDPHP  163 (229)
T ss_pred             eeccceeEEEEEEEEecCeecccch------hcCH----HHHHHHHHHHHHHH---HcCCccCCCCc
Confidence            1111234567999999998886654      1322    35566778899999   99999999876

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=95.18  E-value=0.022  Score=63.55  Aligned_cols=33  Identities=27%  Similarity=0.426  Sum_probs=26.2

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEee
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKR  322 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~  322 (425)
                      ..+|...++|..|+||.||..... ..+.+|.|.
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~ki  115 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI  115 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcc
Confidence            357888899999999999999754 356778743

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=94.96  E-value=0.093  Score=47.64  Aligned_cols=76  Identities=18%  Similarity=0.229  Sum_probs=56.3

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCccc-ceeeEEeeccccCCceEEEEEecC
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV-ALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV-~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ...|++|++|.||+|.+. |..+|+|.-...+.  ...+..|.+++..+.-.++. +++.|-.         -++.|||.
T Consensus        27 ~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~---------~~i~me~i   94 (201)
T COG2112          27 EKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGE---------DFIRMEYI   94 (201)
T ss_pred             hhhhhcccccEEEEeecc-CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEech---------hhhhhhhh
Confidence            467999999999999985 55899998764332  46789999999998876654 4444432         35669999


Q ss_pred             CCCCHHHHH
Q 048791          375 KNGSVYDHL  383 (425)
Q Consensus       375 ~~GsL~~~L  383 (425)
                      .+-.|.+.-
T Consensus        95 ~G~~L~~~~  103 (201)
T COG2112          95 DGRPLGKLE  103 (201)
T ss_pred             cCcchhhhh
Confidence            887876644

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.85  E-value=0.4  Score=44.38  Aligned_cols=115  Identities=17%  Similarity=0.250  Sum_probs=75.2

Q ss_pred             ccceeecccCcccEEeeecCCCCeeEEeeecCCC----------------ccchHHHHHHHHHHhhCC------CCcccc
Q 048791          294 SRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS----------------AAGDATFKHEVEVIASVR------HVNLVA  351 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~----------------~~~~~~f~~Ev~il~~l~------H~NIV~  351 (425)
                      +....||+|+.=.||.-  ++.....||++....                ....+++.+|+.-...+.      +..|.+
T Consensus         4 ~~~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             CCCcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            44578999999999974  445567788886544                122456777776666655      788999


Q ss_pred             eeeEEeeccccCCceEEEEEecCCC------CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          352 LRGYCIATTQLEGHQRIIVCDLMKN------GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       352 l~g~~~~~~~~~~~~~~LV~Ey~~~------GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+..++.     -.-+|+|..-+      -+|.+++...   .++. ...+...+   =-.||-   +..|+.+|++|
T Consensus        82 ~~G~veT~~-----G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L~~---f~~~l~---~~~Iv~~dl~~  146 (199)
T PF10707_consen   82 FYGFVETNL-----GLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQALDE---FKRYLL---DHHIVIRDLNP  146 (199)
T ss_pred             EeEEEecCC-----ceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHHHH---HHHHHH---HcCCeecCCCc
Confidence            999987532     34677776532      3577777432   3555 33333333   345555   67899999986

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=94.79  E-value=0.31  Score=45.91  Aligned_cols=99  Identities=18%  Similarity=0.155  Sum_probs=68.8

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcc--cceeeEEeeccccCCceEEEEEecC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNL--VALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NI--V~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      ..||+|..+.||+.   .|..+++|......  ......+|.+++..+..-++  .+.++++.     ..+...+|||++
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~-----~~~~~glv~e~i   76 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVE-----DGGRLGLIYELI   76 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEe-----cCCeeeeeeeec
Confidence            56899999999984   24466788876432  23456889999998865444  56666664     344467899999


Q ss_pred             CCCC-HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          375 KNGS-VYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       375 ~~Gs-L~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      ++.. +...+      ..+...+..++..+|+.+.-||
T Consensus        77 ~G~~~~~~~~------~~~~~~~~~l~~~la~~l~~lH  108 (226)
T TIGR02172        77 VGKRSFSRII------SDNPSRLEEIAKIFAEMAKKLH  108 (226)
T ss_pred             CCccchhhhh------cCCHHHHHHHHHHHHHHHHHHh
Confidence            9753 33333      2344556678999999999999

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=94.56  E-value=0.017  Score=59.89  Aligned_cols=54  Identities=26%  Similarity=0.321  Sum_probs=47.2

Q ss_pred             eEEEEEecCCCCCHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFA-SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~-~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++.|+++...+|.+||.. ......+|...+.++.|++.|++|      ++.+|||+||
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp  384 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKP  384 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccc
Confidence            46899999999999999964 334568899999999999999999      6889999997

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=93.64  E-value=0.43  Score=44.96  Aligned_cols=96  Identities=13%  Similarity=0.065  Sum_probs=63.3

Q ss_pred             ecccCc-ccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEEEEecCCC
Q 048791          299 IGRGGY-GNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRIIVCDLMKN  376 (425)
Q Consensus       299 IG~G~f-G~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~  376 (425)
                      |-.|.. ..||+...+ +..+.||+.....   .....+|++++..+. +--+.+++++..     .++..++|||++++
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~~~~lv~e~i~G   76 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGS-----DDGRAWLLTSAVPG   76 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEe-----cCCccEEEEEeeCC
Confidence            445555 678998764 4678888875432   345678999988884 433456666654     22456899999998


Q ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          377 GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       377 GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      .++.....        ...+..++.++++.|+-||
T Consensus        77 ~~l~~~~~--------~~~~~~~~~~l~~~l~~lH  103 (244)
T cd05150          77 VPAAALWE--------ELEPERLVDALAEALRRLH  103 (244)
T ss_pred             ccHhHhhc--------ccCHHHHHHHHHHHHHHHh
Confidence            77754321        1233456777788888888

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=93.49  E-value=0.037  Score=42.90  Aligned_cols=20  Identities=30%  Similarity=0.559  Sum_probs=13.7

Q ss_pred             CCcccccHHHHHHHhcCccc
Q 048791          276 TNLVRFTFDDIKKATRNFSR  295 (425)
Q Consensus       276 ~~~~~f~~~ei~~at~~f~~  295 (425)
                      +....++|+|..+|...|..
T Consensus        52 tYIDP~TYEDP~qAV~eFAk   71 (75)
T PF14575_consen   52 TYIDPHTYEDPNQAVREFAK   71 (75)
T ss_dssp             ----GGGSSSHHHHHHHCSS
T ss_pred             eecCcccccCHHHHHHHHHh
Confidence            44556889999999988874

...

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=93.38  E-value=0.036  Score=37.21  Aligned_cols=30  Identities=23%  Similarity=0.551  Sum_probs=13.4

Q ss_pred             CcceeeehhHHHHHHHHHHHHHHHHHHhhhh
Q 048791          218 KNKGLIAGVLVVCVVGLLLISGGVWIFWRKR  248 (425)
Q Consensus       218 ~~~~~ii~i~v~~v~~~lll~~~~~~~~rrr  248 (425)
                      +...+..+++++++++++++. +++++|+||
T Consensus         9 ~~vaIa~~VvVPV~vI~~vl~-~~l~~~~rR   38 (40)
T PF08693_consen    9 NTVAIAVGVVVPVGVIIIVLG-AFLFFWYRR   38 (40)
T ss_pred             ceEEEEEEEEechHHHHHHHH-HHhheEEec
Confidence            334455556555555333333 334434444

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=93.15  E-value=0.042  Score=46.46  Aligned_cols=44  Identities=18%  Similarity=0.314  Sum_probs=34.4

Q ss_pred             ceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHh
Q 048791          296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIA  342 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~  342 (425)
                      .+.|+.|+.|+||+|++.+|+.||||..+..-   .+.+..++.+|.
T Consensus        16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i---~~~i~~Dl~~l~   59 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKDGEEVAVKVQRPGI---EEQIEADLRILR   59 (119)
T ss_pred             cchhhheehhhheeeeecccchhhhhhcchHH---HHHHHHHHHHHH
Confidence            37799999999999999999999999986532   234555665554

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.71  E-value=0.64  Score=47.72  Aligned_cols=101  Identities=16%  Similarity=0.101  Sum_probs=66.1

Q ss_pred             eeecccCcccEEeeecCCC-CeeEEeeecCCC-------ccchHHHHHHHHHHhhCC---CCcccceeeEEeeccccCCc
Q 048791          297 NIIGRGGYGNVYKGLLPDG-SEVALKRFKNCS-------AAGDATFKHEVEVIASVR---HVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g-~~VAVK~l~~~~-------~~~~~~f~~Ev~il~~l~---H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +.||.|.+..||+....+| +.|.||.-....       ....+.+..|.+.|..+.   ...+.+++.+.       ..
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D-------~~  104 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD-------EE  104 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC-------CC
Confidence            5689999999999998777 489999754211       112356677888888763   24566777763       34


Q ss_pred             eEEEEEecCCCCC-HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          366 QRIIVCDLMKNGS-VYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       366 ~~~LV~Ey~~~Gs-L~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      ..++||||+++.. +.+.|....  ..     -.++.+|.+.|+-+|
T Consensus       105 ~~~lVME~L~~~~~lr~~Ll~g~--~~-----p~~a~~iG~~LA~~~  144 (401)
T PRK09550        105 LAVTVMEDLSDHKILRKGLIDGK--KY-----PKLAEHIGEFLARTL  144 (401)
T ss_pred             CCEEEEecCCCccHHHHHHhcCC--cc-----HHHHHHHHHHHHHHH
Confidence            5689999998754 455553321  11     234556666666666

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=91.19  E-value=0.19  Score=42.63  Aligned_cols=31  Identities=16%  Similarity=0.106  Sum_probs=18.2

Q ss_pred             eeeehhHHHHHHHHHHHHHHHHHHhhhhhcc
Q 048791          221 GLIAGVLVVCVVGLLLISGGVWIFWRKRVVS  251 (425)
Q Consensus       221 ~~ii~i~v~~v~~~lll~~~~~~~~rrr~~~  251 (425)
                      ..+++|++++++++++++++++++.||++|+
T Consensus        64 ~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   64 PAIIGIIFGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             cceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            4567777777776666665555555554443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=87.28  E-value=0.21  Score=43.74  Aligned_cols=33  Identities=36%  Similarity=0.406  Sum_probs=17.1

Q ss_pred             CCcceeeehhHHHHHHHHHHH-HHHHHHHhhhhh
Q 048791          217 KKNKGLIAGVLVVCVVGLLLI-SGGVWIFWRKRV  249 (425)
Q Consensus       217 ~~~~~~ii~i~v~~v~~~lll-~~~~~~~~rrr~  249 (425)
                      ++.+.+|||+++++.+.++++ ++++|++++|++
T Consensus        45 ~knknIVIGvVVGVGg~ill~il~lvf~~c~r~k   78 (154)
T PF04478_consen   45 SKNKNIVIGVVVGVGGPILLGILALVFIFCIRRK   78 (154)
T ss_pred             cCCccEEEEEEecccHHHHHHHHHhheeEEEecc
Confidence            345567888887754433333 333344444433

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PLN03150 hypothetical protein; Provisional

Probab=87.24  E-value=0.17  Score=54.98  Aligned_cols=17  Identities=18%  Similarity=0.133  Sum_probs=8.7

Q ss_pred             chHHHHHhccCCCCCCC
Q 048791          134 TLDDVVSNCNQSLGNSA  150 (425)
Q Consensus       134 ~l~~l~~sc~~~l~~~~  150 (425)
                      .|+.|+.+.|...+..|
T Consensus       467 ~L~~LdLs~N~lsg~iP  483 (623)
T PLN03150        467 SLEVLDLSYNSFNGSIP  483 (623)
T ss_pred             CCCEEECCCCCCCCCCc
Confidence            34445555555554444

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=86.78  E-value=0.12  Score=55.18  Aligned_cols=112  Identities=16%  Similarity=0.041  Sum_probs=69.8

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCc-ccceeeEEeeccccCCceEEEEEecCC
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN-LVALRGYCIATTQLEGHQRIIVCDLMK  375 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~N-IV~l~g~~~~~~~~~~~~~~LV~Ey~~  375 (425)
                      +-.++|+++++||.+-.-.+...+|.+..     ..+..-++++|.+++||| .|..++-+.     .+...+++++|..
T Consensus       248 h~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~-----~E~~~~i~~~i~s  317 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYD-----GEDYLWIPMRICS  317 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCC-----cccccchhhhhhc
Confidence            44688999999998732223333554432     134566899999999999 555554443     4556789999998


Q ss_pred             CC-CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 048791          376 NG-SVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRD  422 (425)
Q Consensus       376 ~G-sL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRD  422 (425)
                      .| +...-. ....-.+...+...+...-+++++|||   +-.-+|||
T Consensus       318 ~~rs~~~~~-~~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d  361 (829)
T KOG0576|consen  318 TGRSSALEM-TVSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD  361 (829)
T ss_pred             CCccccccC-ChhhHhhhhhhhhhhhhhhcccccccc---cccccCcc
Confidence            76 221111 001112444445556677789999999   44457886

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=85.37  E-value=0.32  Score=50.61  Aligned_cols=73  Identities=21%  Similarity=0.332  Sum_probs=55.2

Q ss_pred             HHHHhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          286 IKKATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       286 i~~at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      +.+..++|.....+|.|+||+|+.+... |+-.+|||++.-. ......+..+|+.-++++.|++++++.-.+..
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            3444567888999999999999999854 4558999998632 22334567889999999999999987655543

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=84.75  E-value=5.5  Score=36.99  Aligned_cols=95  Identities=15%  Similarity=0.096  Sum_probs=58.2

Q ss_pred             eeecccCcccEEeeecCC--CCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcc-cceeeEEeeccccCCceEEEEEec
Q 048791          297 NIIGRGGYGNVYKGLLPD--GSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNL-VALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~--g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NI-V~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      +.|..|-...+|+....+  +..|.+|........ ..+-.+|+.++..+...++ .++++..      +   ..+||||
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~------~---~~~l~e~   73 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATF------Q---NGLIYEF   73 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEe------C---CcEEEEe
Confidence            456667778899888664  567888876542221 1233478888888854444 3444332      1   1489999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      +++.++.....          ..-.++.++++.|+-||
T Consensus        74 i~G~~l~~~~~----------~~~~~~~~la~~l~~lH  101 (235)
T cd05157          74 IPGRTLEPEDL----------RNPKIYRLIARELAKLH  101 (235)
T ss_pred             eCCCcCCHHHc----------cChHHHHHHHHHHHHHh
Confidence            99866542211          11235667778888888

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=82.89  E-value=0.31  Score=54.75  Aligned_cols=126  Identities=17%  Similarity=0.131  Sum_probs=74.6

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .+.|...+-+.+|.++.++...- ..|...++|.......   ...++...+-.++-..+||-+++..--.     ....
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~rs  877 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCRS  877 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCCC
Confidence            44566667788899999887762 2243344443332111   1111222222222222344444332221     1355


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+||++|..+++|...|+...  ..+..-....+..+.+.++|||   ...++|||+||
T Consensus       878 P~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p  932 (1205)
T KOG0606|consen  878 PLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLH---SSLRKHRDLKP  932 (1205)
T ss_pred             CcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccc---cchhhcccccc
Confidence            6799999999999999997643  3443334445566889999999   66699999986

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=81.82  E-value=5.7  Score=37.17  Aligned_cols=98  Identities=14%  Similarity=0.078  Sum_probs=58.7

Q ss_pred             eeecccCccc-EEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCC---cccceeeEEeeccccCCceEEEEEe
Q 048791          297 NIIGRGGYGN-VYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV---NLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       297 ~~IG~G~fG~-Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~---NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      +.|+.|+... ||+.    +..+.+|..+..  .....+.+|.+++..+...   -+.+.++......  .....+++||
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~--~~~~~~~l~~   74 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGE--GYPWPWSVYR   74 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCcc--CCCcceEEEE
Confidence            4577777764 8874    234667765431  2245788999999888632   2333333322110  1124588999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      ++++.++.+..       +.  ....++.++++.|.-||
T Consensus        75 ~i~G~~l~~~~-------~~--~~~~l~~~la~~l~~LH  104 (235)
T cd05155          75 WLEGETATAAA-------LS--DPSEFAEDLADFLAALR  104 (235)
T ss_pred             eecCCCCCccc-------cC--CHHHHHHHHHHHHHHHh
Confidence            99987775431       11  13367788888888888

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	425
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-32
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-31
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-21
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-21
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-14
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-14
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-14
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-12
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-10
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-09
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-09
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-08
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-08
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		5e-08
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		5e-08
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		5e-08
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		5e-08
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-08
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		6e-08
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		6e-08
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		6e-08
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		6e-08
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		6e-08
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-08
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		1e-07
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-07
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-07
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-07
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-07
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-07
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-07
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-07
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-07
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-07
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		2e-07
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		3e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-07
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-07
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		4e-07
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-07
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-07
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-07
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		4e-07
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-07
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		4e-07
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-07
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-07
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		4e-07
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		4e-07
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-07
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		4e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		5e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		5e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		6e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		7e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		7e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		8e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		8e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		8e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-06
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-06
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-06
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		5e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		9e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		3e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-05
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		5e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-05
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		6e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		1e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		1e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-04
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		3e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		3e-04
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		3e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		3e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		3e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		4e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		5e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		5e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		5e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		5e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		5e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		5e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		5e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		5e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		5e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		5e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		5e-04
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		5e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		5e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		5e-04
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		5e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		6e-04
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		6e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		6e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		7e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		7e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		7e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		7e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		7e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		7e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		7e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		8e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/152 (48%), Positives = 95/152 (62%), Gaps = 8/152 (5%)
Query: 277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA-AGDATFK 335
            L RF+  +++ A+ NFS  NI+GRGG+G VYKG L DG+ VA+KR K      G+  F+
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 336 HEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFA--SNGPKLSW 393
            EVE+I+   H NL+ LRG+C+  T     +R++V   M NGSV   L     + P L W
Sbjct: 84  TEVEMISMAVHRNLLRLRGFCMTPT-----ERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 394 PLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           P RQ IALG+ARGLAYLH    P I HRD+KA
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 170

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNC-SAAGDATFK 335
            L RF+  +++ A+ NF   NI+GRGG+G VYKG L DG  VA+KR K   +  G+  F+
Sbjct: 16  QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 336 HEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFA--SNGPKLSW 393
            EVE+I+   H NL+ LRG+C+  T+     R++V   M NGSV   L     + P L W
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 394 PLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           P RQ IALG+ARGLAYLH    P I HRD+KA
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 10/148 (6%)
Query: 280 RFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVE 339
           R    D+++AT NF    +IG G +G VYKG+L DG++VALKR    S+ G   F+ E+E
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 340 VIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP--KLSWPLRQ 397
            ++  RH +LV+L G+C      E ++ I++   M+NG++  HL+ S+ P   +SW  R 
Sbjct: 88  TLSFCRHPHLVSLIGFCD-----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIKA 425
            I +G ARGL YLH     AI HRD+K+
Sbjct: 143 EICIGAARGLHYLH---TRAIIHRDVKS 167

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 10/148 (6%)
Query: 280 RFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVE 339
           R    D+++AT NF    +IG G +G VYKG+L DG++VALKR    S+ G   F+ E+E
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 340 VIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP--KLSWPLRQ 397
            ++  RH +LV+L G+C      E ++ I++   M+NG++  HL+ S+ P   +SW  R 
Sbjct: 88  TLSFCRHPHLVSLIGFCD-----ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIKA 425
            I +G ARGL YLH     AI HRD+K+
Sbjct: 143 EICIGAARGLHYLH---TRAIIHRDVKS 167

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 26/164 (15%)
Query: 276 TNLVRFTFDDIKKATRNFSR------DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA 329
           T    F+F ++K  T NF         N +G GG+G VYKG + + + VA+K+    +A 
Sbjct: 10  TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKL---AAM 65
Query: 330 GDAT-------FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDH 382
            D T       F  E++V+A  +H NLV L G+       +G    +V   M NGS+ D 
Sbjct: 66  VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDR 120
Query: 383 LFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           L   +G P LSW +R  IA G A G+ +LH        HRDIK+
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 161

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 26/164 (15%)
Query: 276 TNLVRFTFDDIKKATRNFSR------DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA 329
           T    F+F ++K  T NF         N +G GG+G VYKG + + + VA+K+    +A 
Sbjct: 10  TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKL---AAM 65
Query: 330 GDAT-------FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDH 382
            D T       F  E++V+A  +H NLV L G+       +G    +V   M NGS+ D 
Sbjct: 66  VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDR 120
Query: 383 LFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           L   +G P LSW +R  IA G A G+ +LH        HRDIK+
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 161

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 26/164 (15%)
Query: 276 TNLVRFTFDDIKKATRNFSR------DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA 329
           T    F+F ++K  T NF         N +G GG+G VYKG + + + VA+K+    +A 
Sbjct: 4   TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKL---AAM 59
Query: 330 GDAT-------FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDH 382
            D T       F  E++V+A  +H NLV L G+       +G    +V   M NGS+ D 
Sbjct: 60  VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDR 114
Query: 383 LFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           L   +G P LSW +R  IA G A G+ +LH        HRDIK+
Sbjct: 115 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKS 155

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 276 TNLVRFTFDDIKKATRNFSR------DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA 329
           T    F+F ++K  T NF         N  G GG+G VYKG + + + VA+K+    +A 
Sbjct: 1   TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKL---AAM 56
Query: 330 GDAT-------FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDH 382
            D T       F  E++V A  +H NLV L G+       +G    +V     NGS+ D 
Sbjct: 57  VDITTEELKQQFDQEIKVXAKCQHENLVELLGFSS-----DGDDLCLVYVYXPNGSLLDR 111
Query: 383 LFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           L   +G P LSW  R  IA G A G+ +LH        HRDIK+
Sbjct: 112 LSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKS 152

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY  A
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL AS   K        IA  TARG+ YLH     +I
Sbjct: 92  P------QLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 142 IHRDLKS 148

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 20  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL AS   K        IA  TARG+ YLH     +I
Sbjct: 80  P------QLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLH---AKSI 129
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 130 IHRDLKS 136

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 32  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL AS   K        IA  TARG+ YLH     +I
Sbjct: 92  P------QLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLH---AKSI 141
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 142 IHRDLKS 148

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 13/138 (9%)
Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS----AAGDATFKHEVEVIASVRHV 347
             + + IIG GG+G VY+     G EVA+K  ++      +      + E ++ A ++H 
Sbjct: 8   ELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           N++ALRG C+    L      +V +  + G +   L   +G ++   +  + A+  ARG+
Sbjct: 67  NIIALRGVCLKEPNL-----CLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGM 118
Query: 408 AYLHFGAQPAIFHRDIKA 425
            YLH  A   I HRD+K+
Sbjct: 119 NYLHDEAIVPIIHRDLKS 136

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY  A
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 76  P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 126 IHRDLKS 132

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           IG+G +G V++G    G EVA+K F   S+  + ++  E E+  +V  RH N++   G+ 
Sbjct: 50  IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 102
Query: 357 IATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-- 412
            A  +  G   Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH   
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 413 -GAQ--PAIFHRDIKA 425
            G Q  PAI HRD+K+
Sbjct: 160 VGTQGKPAIAHRDLKS 175

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           IG+G +G V++G    G EVA+K F   S+  + ++  E E+  +V  RH N++   G+ 
Sbjct: 12  IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 64
Query: 357 IATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-- 412
            A  +  G   Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH   
Sbjct: 65  AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 413 -GAQ--PAIFHRDIKA 425
            G Q  PAI HRD+K+
Sbjct: 122 VGTQGKPAIAHRDLKS 137

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           IG+G +G V++G    G EVA+K F   S+  + ++  E E+  +V  RH N++   G+ 
Sbjct: 37  IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 89
Query: 357 IATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-- 412
            A  +  G   Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH   
Sbjct: 90  AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 413 -GAQ--PAIFHRDIKA 425
            G Q  PAI HRD+K+
Sbjct: 147 VGTQGKPAIAHRDLKS 162

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           IG+G +G V++G    G EVA+K F   S+  + ++  E E+  +V  RH N++   G+ 
Sbjct: 11  IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 63
Query: 357 IATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-- 412
            A  +  G   Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH   
Sbjct: 64  AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 413 -GAQ--PAIFHRDIKA 425
            G Q  PAI HRD+K+
Sbjct: 121 VGTQGKPAIAHRDLKS 136

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 289 ATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDA-------TFKHEVEV 340
           A      +  IG+GG+G V+KG L+ D S VA+K      + G+         F+ EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           ++++ H N+V L G      ++       V + +  G +Y  L     P + W ++  + 
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRM-------VMEFVPCGDLYHRLLDKAHP-IKWSVKLRLM 128
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           L  A G+ Y+     P I HRD+++
Sbjct: 129 LDIALGIEYMQ-NQNPPIVHRDLRS 152

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           IG+G +G V++G    G EVA+K F   S+  + ++  E E+  +V  RH N++   G+ 
Sbjct: 14  IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 66
Query: 357 IATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-- 412
            A  +  G   Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH   
Sbjct: 67  AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 413 -GAQ--PAIFHRDIKA 425
            G Q  PAI HRD+K+
Sbjct: 124 VGTQGKPAIAHRDLKS 139

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 19/136 (13%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           IG+G +G V++G    G EVA+K F   S+  + ++  E E+  +V  RH N++   G+ 
Sbjct: 17  IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENIL---GFI 69
Query: 357 IATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-- 412
            A  +  G   Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH   
Sbjct: 70  AADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 413 -GAQ--PAIFHRDIKA 425
            G Q  PAI HRD+K+
Sbjct: 127 VGTQGKPAIAHRDLKS 142

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IVC+ M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 VHRDLRA 142

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 289 ATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDA-------TFKHEVEV 340
           A      +  IG+GG+G V+KG L+ D S VA+K      + G+         F+ EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           ++++ H N+V L G      ++       V + +  G +Y  L     P + W ++  + 
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRM-------VMEFVPCGDLYHRLLDKAHP-IKWSVKLRLM 128
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           L  A G+ Y+     P I HRD+++
Sbjct: 129 LDIALGIEYMQ-NQNPPIVHRDLRS 152

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 17/145 (11%)
Query: 289 ATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDA-------TFKHEVEV 340
           A      +  IG+GG+G V+KG L+ D S VA+K      + G+         F+ EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           ++++ H N+V L G      ++       V + +  G +Y  L     P + W ++  + 
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRM-------VMEFVPCGDLYHRLLDKAHP-IKWSVKLRLM 128
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           L  A G+ Y+     P I HRD+++
Sbjct: 129 LDIALGIEYMQ-NQNPPIVHRDLRS 152

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRF--KNCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
           IG G +G V++     GS+VA+K    ++  A     F  EV ++  +RH N+V   G  
Sbjct: 45  IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQ 415
                L      IV + +  GS+Y  L  S    +L    R S+A   A+G+ YLH    
Sbjct: 104 TQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 416 PAIFHRDIKA 425
           P I HRD+K+
Sbjct: 158 PPIVHRDLKS 167

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 21/149 (14%)
Query: 287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-- 344
           +   R+ +    +G+G YG V++G    G  VA+K F   S+  + ++  E E+  +V  
Sbjct: 4   RTVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVML 59
Query: 345 RHVNLVALRGYCIATTQLEGH---QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
           RH N++      IA+     H   Q  ++    + GS+YD+L  +    +S  LR  I L
Sbjct: 60  RHENILGF----IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-CLR--IVL 112
Query: 402 GTARGLAYLH---FGAQ--PAIFHRDIKA 425
             A GLA+LH   FG Q  PAI HRD+K+
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKS 141

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 76  P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 126 IHRDLKS 132

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 16  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 76  P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 125
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 126 IHRDLKS 132

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 81  P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 131 IHRDLKS 137

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 21  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 81  P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 130
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 131 IHRDLKS 137

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 18  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 78  P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 127
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 128 IHRDLKS 134

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 36  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 96  P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 145
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 146 IHRDLKS 152

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 104 P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 154 IHRDLKS 160

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 43  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 103 P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 152
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 153 IHRDLKS 159

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V +      +      FK+EV V+   RHVN++   GY   
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                  Q  IV    +  S+Y HL      K        IA  TA+G+ YLH     +I
Sbjct: 104 P------QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLH---AKSI 153
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 154 IHRDLKS 160

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           +G+G YG V++G    G  VA+K F   S+  + ++  E E+  +V  RH N++      
Sbjct: 16  VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGF---- 67
Query: 357 IATTQLEGH---QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH-- 411
           IA+     H   Q  ++    + GS+YD+L  +    +S  LR  I L  A GLA+LH  
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-CLR--IVLSIASGLAHLHIE 124
Query: 412 -FGAQ--PAIFHRDIKA 425
            FG Q  PAI HRD+K+
Sbjct: 125 IFGTQGKPAIAHRDLKS 141

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-- 344
           +   R  +    +G+G YG V++G    G  VA+K F   S+  + ++  E E+  +V  
Sbjct: 33  RTVARQITLLECVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVML 88
Query: 345 RHVNLVALRGYCIATTQLEGH---QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
           RH N++      IA+     H   Q  ++    + GS+YD+L  +    +S  LR  I L
Sbjct: 89  RHENILGF----IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVS-CLR--IVL 141
Query: 402 GTARGLAYLH---FGAQ--PAIFHRDIKA 425
             A GLA+LH   FG Q  PAI HRD+K+
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKS 170

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G VYKG       V + +  + +      F++EV V+   RHVN++   GY   
Sbjct: 44  IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY--- 100
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
              +      IV    +  S+Y HL         + L   IA  TA+G+ YLH      I
Sbjct: 101 ---MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLH---AKNI 153
Query: 419 FHRDIKA 425
            HRD+K+
Sbjct: 154 IHRDMKS 160

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 249 SEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 302 VHRDLRA 308

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 249 SEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 302 VHRDLRA 308

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRF--KNCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
           IG G +G V++     GS+VA+K    ++  A     F  EV ++  +RH N+V   G  
Sbjct: 45  IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQ 415
                L      IV + +  GS+Y  L  S    +L    R S+A   A+G+ YLH    
Sbjct: 104 TQPPNLS-----IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 416 PAIFHRDIKA 425
           P I HR++K+
Sbjct: 158 PPIVHRNLKS 167

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 16  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 73  SEE----PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 125
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 126 VHRDLRA 132

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 19/136 (13%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYC 356
           IG+G YG V+ G    G +VA+K F       +A++  E E+  +V  RH N++   G+ 
Sbjct: 45  IGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENIL---GFI 97
Query: 357 IATTQLEGH--QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH--- 411
            A  +  G   Q  ++ D  +NGS+YD+L ++    L       +A  +  GL +LH   
Sbjct: 98  AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 412 FGAQ--PAIFHRDIKA 425
           F  Q  PAI HRD+K+
Sbjct: 155 FSTQGKPAIAHRDLKS 170

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 30  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 86
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 87  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 139
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 140 IHRDLRA 146

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 27  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 84  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 136
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 137 IHRDLRA 143

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 26  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 83  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 IHRDLRA 142

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 19  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 76  SEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 128
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 129 VHRDLRA 135

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 27  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 84  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 136
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 137 IHRDLRA 143

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 22  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 78
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 79  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 131
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 132 IHRDLRA 138

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 17/147 (11%)
Query: 287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-- 344
           +   R  +    +G+G YG V++GL   G  VA+K F   S+  + ++  E E+  +V  
Sbjct: 4   RTVARQVALVECVGKGRYGEVWRGLW-HGESVAVKIF---SSRDEQSWFRETEIYNTVLL 59
Query: 345 RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGT 403
           RH N++      + T++    Q  ++    ++GS+YD L      P L+  LR  +A+  
Sbjct: 60  RHDNILGFIASDM-TSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA--LR--LAVSA 114
Query: 404 ARGLAYLH---FGAQ--PAIFHRDIKA 425
           A GLA+LH   FG Q  PAI HRD K+
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKS 141

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 78  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 131 IHRDLRA 137

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 23  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 79
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 80  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 132
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 133 IHRDLRA 139

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 78  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 131 IHRDLRA 137

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 29  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 85
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 86  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 138
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 139 IHRDLRA 145

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 21  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 78  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 131 IHRDLRA 137

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 16  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 72
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 73  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 125
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 126 IHRDLRA 132

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 VHRDLRA 142

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 31  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 87
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 88  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 140
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 141 IHRDLRA 147

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 249 SEE----PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 302 VHRDLRA 308

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 15  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 72  SEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 124
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 125 VHRDLRA 131

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 332 SEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 384
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 385 VHRDLRA 391

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 17  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 74  SEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 126
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 127 VHRDLRA 133

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 VHRDLRA 142

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 VHRDLRA 142

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    ++   A G+AY+    +   
Sbjct: 80  SEE----PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNY 132
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 133 VHRDLRA 139

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 VHRDLRA 142

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 23  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    ++   A G+AY+    +   
Sbjct: 80  SEE----PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNY 132
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 133 VHRDLRA 139

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 250 SEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 302
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 303 VHRDLRA 309

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG G +G V+ G   +  +VA+K  K  S + D  F  E EV+  + H  LV L G C  
Sbjct: 35  IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGVC-- 91
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
              LE     +V + M++G + D+L    G   +  L   + L    G+AYL    +  +
Sbjct: 92  ---LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL-GMCLDVCEGMAYLE---EACV 144
Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 145 IHRDLAA 151

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 136 VHRDLAA 142

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 17  LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 73
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 74  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 126
Query: 419 FHRDIKA 425
            HR+++A
Sbjct: 127 IHRNLRA 133

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           +    + ++GRG +G V K       +VA+K+ +  S +    F  E+  ++ V H N+V
Sbjct: 9   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIV 65
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAY 409
            L G C+    L       V +  + GS+Y+ L  +   P  +     S  L  ++G+AY
Sbjct: 66  KLYGACLNPVCL-------VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 410 LHFGAQPAIFHRDIK 424
           LH     A+ HRD+K
Sbjct: 119 LHSMQPKALIHRDLK 133

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G   + ++VA+K  K  + +  A F  E  ++ +++H  LV L  Y + 
Sbjct: 20  LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRL--YAVV 76
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M  GS+ D L +  G K+  P     +   A G+AY+    +   
Sbjct: 77  TKE---EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNY 130
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 131 IHRDLRA 137

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G  G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV L  Y + 
Sbjct: 21  LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M+NGS+ D L   +G KL+      +A   A G+A++    +   
Sbjct: 78  TQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 131 IHRDLRA 137

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           +    + ++GRG +G V K       +VA+K+ +  S +    F  E+  ++ V H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIV 64
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAY 409
            L G C+    L       V +  + GS+Y+ L  +   P  +     S  L  ++G+AY
Sbjct: 65  KLYGACLNPVCL-------VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 410 LHFGAQPAIFHRDIK 424
           LH     A+ HRD+K
Sbjct: 118 LHSMQPKALIHRDLK 132

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G   + ++VA+K  K  + +  A F  E  ++ +++H  LV L  Y + 
Sbjct: 21  LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRL--YAVV 77
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M  GS+ D L +  G K+  P     +   A G+AY+    +   
Sbjct: 78  TRE---EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNY 131
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 132 IHRDLRA 138

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  G + D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 VHRDLRA 142

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L  Y + 
Sbjct: 26  LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  G + D L    G  L  P    +A   A G+AY+    +   
Sbjct: 83  SEE----PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 136 VHRDLRA 142

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 23/159 (14%)
Query: 281 FTFDDIKKATRNFSR---------DNIIGRGGYGNVYKG--LLPDGSE--VALKRFKN-C 326
           FTF+D  +A R F++         + +IG G +G V  G   LP   E  VA+K  K+  
Sbjct: 14  FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 327 SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS 386
           +      F  E  ++    H N++ L G    +T +     +I+ + M+NGS+ D     
Sbjct: 74  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-----MIITEFMENGSL-DSFLRQ 127
Query: 387 NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           N  + +      +  G A G+ YL   A     HRD+ A
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAA 163

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+ G     ++VA+K  K  + + + +F  E +++  ++H  LV L  Y + 
Sbjct: 17  LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           + +       IV + M  GS+ D L    G  L  P    +A   A G+AY+    +   
Sbjct: 74  SEE----PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNY 126
Query: 419 FHRDIKA 425
            HRD+++
Sbjct: 127 IHRDLRS 133

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 63
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A 
Sbjct: 64  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAA 139

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 63
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A 
Sbjct: 64  KEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAA 139

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 63
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A 
Sbjct: 64  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAA 139

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 10  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 68
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A 
Sbjct: 69  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAA 144

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 63
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A 
Sbjct: 64  KEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAA 139

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGS----EVALKRFKNCSA-AGDATFKHEVEVIASVR 345
              R  ++G G +G VYKG+ +P+G      VA+K     +    +  F  E  ++AS+ 
Sbjct: 16  ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 346 HVNLVALRGYCIA-TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTA 404
           H +LV L G C++ T QL       V  LM +G + +++       +   L  +  +  A
Sbjct: 76  HPHLVRLLGVCLSPTIQL-------VTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIA 127
Query: 405 RGLAYLHFGAQPAIFHRDIKA 425
           +G+ YL    +  + HRD+ A
Sbjct: 128 KGMMYLE---ERRLVHRDLAA 145

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVE 339
            + D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAA 59
Query: 340 VIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSI 399
           V+  ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +
Sbjct: 60  VMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 400 ALGTARGLAYLHFGAQPAIFHRDIKA 425
           A   +  + YL    +    HRD+ A
Sbjct: 115 ATQISSAMEYLE---KKNFIHRDLAA 137

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGS----EVALKRFKNCSA-AGDATFKHEVEVIASVR 345
              R  ++G G +G VYKG+ +P+G      VA+K     +    +  F  E  ++AS+ 
Sbjct: 39  ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 346 HVNLVALRGYCIA-TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTA 404
           H +LV L G C++ T QL       V  LM +G + +++       +   L  +  +  A
Sbjct: 99  HPHLVRLLGVCLSPTIQL-------VTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIA 150
Query: 405 RGLAYLHFGAQPAIFHRDIKA 425
           +G+ YL    +  + HRD+ A
Sbjct: 151 KGMMYLE---ERRLVHRDLAA 168

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 282 TFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEV 340
           + D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V
Sbjct: 2   SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAV 60
Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           +  ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A
Sbjct: 61  MKEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 115
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
              +  + YL    +    HRD+ A
Sbjct: 116 TQISSAMEYLE---KKNFIHRDLAA 137

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 10  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 68
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 69  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAA 144

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 63
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 64  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAA 139

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 10  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 68
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 69  KEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAA 144

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 18  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 76
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 77  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 132 QISSAMEYLE---KKNFIHRDLAA 152

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 9   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 67
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 68  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 123 QISSAMEYLE---KKNFIHRDLAA 143

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 10  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 68
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 69  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAA 144

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 6   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 64
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 65  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 120 QISSAMEYLE---KKNFIHRDLAA 140

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 63
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 64  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAA 139

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 7   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 65
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 66  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 121 QISSAMEYLE---KKNFIHRDLAA 141

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
           +  +G G +G V+       ++VA+K  K  S + +A F  E  V+ +++H  LV L  +
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL--H 243
Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
            + T +       I+ + M  GS+ D L +  G K   P     +   A G+A++    Q
Sbjct: 244 AVVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 296
Query: 416 PAIFHRDIKA 425
               HRD++A
Sbjct: 297 RNYIHRDLRA 306

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 10  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 68
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 69  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAA 144

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+
Sbjct: 7   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVM 65
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 66  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 121 QISSAMEYLE---KKNFIHRDLAA 141

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 7   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 65
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 66  KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 121 QISSAMEYLE---KKNFIHRDLAA 141

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 6   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 64
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 65  KEIKHPNLVQLLGVCTREPPF-----YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HRD+ A
Sbjct: 120 QISSAMEYLE---KKNFIHRDLAA 140

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
           +  +G G +G V+       ++VA+K  K  S + +A F  E  V+ +++H  LV L  +
Sbjct: 20  EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL--H 76
Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
            + T +       I+ + M  GS+ D L +  G K   P     +   A G+A++    Q
Sbjct: 77  AVVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 129
Query: 416 PAIFHRDIKA 425
               HRD++A
Sbjct: 130 RNYIHRDLRA 139

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 275 STNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDAT 333
           + NL   + D  +    + +  + +G G YG VY G+    S  VA+K  K  +   +  
Sbjct: 16  TENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE- 74
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  V+  ++H NLV L G C            IV + M  G++ D+L   N  +++ 
Sbjct: 75  FLKEAAVMKEIKHPNLVQLLGVCTLEPPF-----YIVTEYMPYGNLLDYLRECNREEVTA 129
Query: 394 PLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
            +   +A   +  + YL    +    HRD+ A
Sbjct: 130 VVLLYMATQISSAMEYLE---KKNFIHRDLAA 158

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           +G G +G V+       ++VA+K  K  S + +A F  E  V+ +++H  LV L  + + 
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKL--HAVV 252
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
           T +       I+ + M  GS+ D L +  G K   P     +   A G+A++    Q   
Sbjct: 253 TKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNY 305
Query: 419 FHRDIKA 425
            HRD++A
Sbjct: 306 IHRDLRA 312

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV--IASVRHVNLVALRG 354
            +IGRG YG VYKG L D   VA+K F   S A    F +E  +  +  + H N+     
Sbjct: 19  ELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIAR--- 71
Query: 355 YCIATTQLEGHQR---IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
           + +   ++    R   ++V +   NGS+  +L         W     +A    RGLAYLH
Sbjct: 72  FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLH 128
Query: 412 FGA------QPAIFHRDIKA 425
                    +PAI HRD+ +
Sbjct: 129 TELPRGDHYKPAISHRDLNS 148

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVE 339
            + D  +    + +  + +G G +G VY+G+    S  VA+K  K  +   +  F  E  
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAA 59
Query: 340 VIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSI 399
           V+  ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +
Sbjct: 60  VMKEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 400 ALGTARGLAYLHFGAQPAIFHRDIKA 425
           A   +  + YL    +    HRD+ A
Sbjct: 115 ATQISSAMEYLE---KKNFIHRDLAA 137

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 297 NIIGRGGYGNVYKGL-LPDGSE----VALKRFK-NCSAAGDATFKHEVEVIASVRHVNLV 350
            ++G G +G VYKG+ +PDG      VA+K  + N S   +     E  V+A V    + 
Sbjct: 23  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L G C+ +T        +V  LM  G + DH+  + G +L      +  +  A+G++YL
Sbjct: 83  RLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRG-RLGSQDLLNWCMQIAKGMSYL 135
Query: 411 HFGAQPAIFHRDIKA 425
                  + HRD+ A
Sbjct: 136 E---DVRLVHRDLAA 147

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 270
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A 
Sbjct: 271 KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HR++ A
Sbjct: 326 QISSAMEYLE---KKNFIHRNLAA 346

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 296 DNIIGRGGYGNVYKGLLPDGS-EVALKRFKN--CSAAGDATFKHEVEVIASVRHVNLVAL 352
           D  IGRG +  VYKGL  + + EVA    ++   + +    FK E E +  ++H N+V  
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV-- 88
Query: 353 RGYCIATTQLEGHQRII-VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
           R Y    + ++G + I+ V +L  +G++  +L      K+   + +S      +GL +LH
Sbjct: 89  RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIK--VLRSWCRQILKGLQFLH 146
Query: 412 FGAQPAIFHRDIK 424
               P I HRD+K
Sbjct: 147 -TRTPPIIHRDLK 158

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 294 SRDNIIGRGGYGNVYKGLLPDGS-----EVALKRFK-NCSAAGDATFKHEVEVIASVRHV 347
           +R  +IG G +G VYKG+L   S      VA+K  K   +      F  E  ++    H 
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL--GTAR 405
           N++ L G       +     +I+ + M+NG++   L   +G    + + Q + +  G A 
Sbjct: 107 NIIRLEGVISKYKPM-----MIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAA 158
Query: 406 GLAYLHFGAQPAIFHRDIKA 425
           G+ YL   A     HRD+ A
Sbjct: 159 GMKYL---ANMNYVHRDLAA 175

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 297 NIIGRGGYGNVYKGLLP--DGS--EVALKRFK--NCSAAGDATFKHEVEVIASVRHVNLV 350
            I+G G +G+V +G L   DG+  +VA+K  K  N S      F  E   +    H N++
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS---NGPKLSWPLRQ--SIALGTAR 405
            L G CI  +     + +++   MK G ++ +L  S    GPK   PL+      +  A 
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK-HIPLQTLLKFMVDIAL 158
Query: 406 GLAYLHFGAQPAIFHRDIKA 425
           G+ YL   +     HRD+ A
Sbjct: 159 GMEYL---SNRNFLHRDLAA 175

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+ + H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 95  FLMEALIISKLNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 148
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 183

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
            +IG+G +G VY G       + L   +  +      FK EV      RH N+V   G C
Sbjct: 39  ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP 416
           ++   L      I+  L K  ++Y  +       L     + IA    +G+ YLH     
Sbjct: 99  MSPPHL-----AIITSLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AK 149
Query: 417 AIFHRDIKA 425
            I H+D+K+
Sbjct: 150 GILHKDLKS 158

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+ + H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 81  FLMEALIISKLNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 134
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 169

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 37  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 97  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 150
Query: 394 P--LRQSIALGTARGLAY-LHFGAQPAIFHRDIKA 425
           P  L     L  AR +A    +  +    HRDI A
Sbjct: 151 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 185

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Query: 293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVA 351
           F    ++G G YG VYKG      ++A  +  + +   +   K E+ ++     H N+  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 352 LRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
             G  I         ++ +V +    GSV D +  + G  L       I     RGL++L
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 411 HFGAQPAIFHRDIKA 425
           H   Q  + HRDIK 
Sbjct: 146 H---QHKVIHRDIKG 157

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 61  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 121 FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 174
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 209

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 47  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 107 FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 160
Query: 394 P--LRQSIALGTARGLAY-LHFGAQPAIFHRDIKA 425
           P  L     L  AR +A    +  +    HRDI A
Sbjct: 161 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 195

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 80  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 133
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 168

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 20  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 80  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILMELMAGGDLKSFLRETR-PRPSQ 133
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 168

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 81  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 134
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 169

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 35  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 95  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILMELMAGGDLKSFLRETR-PRPSQ 148
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 183

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 27  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 87  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 140
Query: 394 P--LRQSIALGTARGLAY-LHFGAQPAIFHRDIKA 425
           P  L     L  AR +A    +  +    HRDI A
Sbjct: 141 PSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 175

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVI 341
           +D  +    + +  + +G G YG VY+G+    S  VA+K  K  +   +   K E  V+
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK-EAAVM 309
Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H NLV L G C            I+ + M  G++ D+L   N  +++  +   +A 
Sbjct: 310 KEIKHPNLVQLLGVCTREPPF-----YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
             +  + YL    +    HR++ A
Sbjct: 365 QISSAMEYLE---KKNFIHRNLAA 385

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 21  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 81  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 134
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 169

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 12  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 72  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 125
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 160

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 29/161 (18%)
Query: 282 TFDDIKKATR-NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKN-CSAAGDAT 333
           +  D+K+  R N +    +G G +G VY+G +      P   +VA+K     CS   +  
Sbjct: 38  SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           F  E  +I+   H N+V     CI  + L+   R I+ +LM  G +   L  +  P+ S 
Sbjct: 98  FLMEALIISKFNHQNIVR----CIGVS-LQSLPRFILLELMAGGDLKSFLRETR-PRPSQ 151
Query: 394 PLRQS------IALGTARGLAYL---HFGAQPAIFHRDIKA 425
           P   +      +A   A G  YL   HF       HRDI A
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAA 186

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV--IASVRHVNLVALRG 354
            +  RG +G V+K  L +   VA+K F         ++++E EV  +  ++H N++   G
Sbjct: 30  EVKARGRFGCVWKAQLLN-EYVAVKIF---PIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF-- 412
                T ++    +I     + GS+ D L A+    +SW     IA   ARGLAYLH   
Sbjct: 86  AEKRGTSVDVDLWLITA-FHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDI 141
Query: 413 -----GAQPAIFHRDIKA 425
                G +PAI HRDIK+
Sbjct: 142 PGLKDGHKPAISHRDIKS 159

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD-ATFKHEVEVIASVRH 346
           ++  F +   +G G Y  VYKGL    G  VALK  K  S  G  +T   E+ ++  ++H
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNG--SVYDHLFASNGPK-LSWPLRQSIALGT 403
            N+V L  Y +  T+   ++  +V + M N      D     N P+ L   L +      
Sbjct: 63  ENIVRL--YDVIHTE---NKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 404 ARGLAYLHFGAQPAIFHRDIK 424
            +GLA+ H   +  I HRD+K
Sbjct: 118 LQGLAFCH---ENKILHRDLK 135

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 76  NPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYLLNW------C 123
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAA 145

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 315 GSEVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL 373
           G +VA+K  K  S     A  K E+E++ ++ H N+V  +G C   T+  G+   ++ + 
Sbjct: 38  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC---TEDGGNGIKLIMEF 94
Query: 374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           + +GS+ ++L   N  K++   +   A+   +G+ YL  G++  + HRD+ A
Sbjct: 95  LPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAA 142

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 315 GSEVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL 373
           G +VA+K  K  S     A  K E+E++ ++ H N+V  +G C   T+  G+   ++ + 
Sbjct: 50  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGIC---TEDGGNGIKLIMEF 106
Query: 374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           + +GS+ ++L   N  K++   +   A+   +G+ YL  G++  + HRD+ A
Sbjct: 107 LPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL--GSRQYV-HRDLAA 154

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH NLV L G  + 
Sbjct: 14  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
               E     IV + M  GS+ D+L +     L        +L     + YL        
Sbjct: 71  ----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 124 VHRDLAA 130

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 77  NPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------C 124
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAA 146

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 281 FTFDDIKKATRNFSR---------DNIIGRGGYGNVYKGLL--PDGSE--VALKRFK-NC 326
           FTF+D  +A R F++         + +IG G +G V  G L  P   E  VA+K  K   
Sbjct: 10  FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 327 SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS 386
           +      F  E  ++    H N++ L G       +     +I+ + M+NGS+ D     
Sbjct: 70  TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV-----MIITEYMENGSL-DAFLRK 123
Query: 387 NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           N  + +      +  G   G+ YL   +  +  HRD+ A
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAA 159

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH NLV L G  + 
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
               E     IV + M  GS+ D+L +     L        +L     + YL        
Sbjct: 258 ----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 311 VHRDLAA 317

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH NLV L G  + 
Sbjct: 20  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
               E     IV + M  GS+ D+L +     L        +L     + YL        
Sbjct: 77  ----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 130 VHRDLAA 136

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 26  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 86  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 133
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 134 VQIAKGMNYLE---DRRLVHRDLAA 155

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH NLV L G  + 
Sbjct: 29  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
               E     IV + M  GS+ D+L +     L        +L     + YL        
Sbjct: 86  ----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 419 FHRDIKA 425
            HRD+ A
Sbjct: 139 VHRDLAA 145

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 76  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAA 145

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 76  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAA 145

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 17  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 77  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 124
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 125 VQIAKGMNYLE---DRRLVHRDLAA 146

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 79  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAA 148

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 76  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAA 145

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 79  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAA 148

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 10  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 70  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 117
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAA 139

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 78  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAA 147

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 80  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 127
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAA 149

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 41  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 101 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 148
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 149 VQIAKGMNYLE---DRRLVHRDLAA 170

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 79  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAA 148

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 76  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 124 VQIAKGMNYLE---DRRLVHRDLAA 145

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 22  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 82  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 129
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 130 VQIAKGMNYLE---DRRLVHRDLAA 151

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 83  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAA 152

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 78  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAA 147

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 78  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAA 147

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 19  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 79  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 127 VQIAKGMNYLE---DRRLVHRDLAA 148

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 20  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 80  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 127
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 128 VQIAKGMNYLE---DRRLVHRDLAA 149

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 78  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAA 147

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 23  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 83  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 131 VQIAKGMNYLE---DRRLVHRDLAA 152

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 18  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 78  NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A+G+ YL       + HRD+ A
Sbjct: 126 VQIAKGMNYLE---DRRLVHRDLAA 147

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 54  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 114 SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 167
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 168 L---ASKKFVHRDLAA 180

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 94  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 147
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 148 L---ASKKFVHRDLAA 160

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 53  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 113 SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 166
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 167 L---ASKKFVHRDLAA 179

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 297 NIIGRGGYGNVYKGLLPDGSEV-ALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
            ++G+G +G   K    +  EV  +K           TF  EV+V+  + H N++   G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
                +L       + + +K G++   +  S   +  W  R S A   A G+AYLH    
Sbjct: 76  LYKDKRLN-----FITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLH---S 126
Query: 416 PAIFHRDIKA 425
             I HRD+ +
Sbjct: 127 MNIIHRDLNS 136

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 95  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 148
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 149 L---ASKKFVHRDLAA 161

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 92  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 145
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 146 L---ASKKFVHRDLAA 158

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 95  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 148
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 149 L---ASKKFVHRDLAA 161

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 94  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 147
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 148 L---ASKKFVHRDLAA 160

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 27  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 87  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 140
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 141 L---ASKKFVHRDLAA 153

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 90  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 143
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 144 L---ASKKFVHRDLAA 156

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 296 DNIIGRGGYGNVYKGLL--PDGSEV--ALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           + +IGRG +G VY G L   DG ++  A+K     +  G+ + F  E  ++    H N++
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAY 409
           +L G C+ +   EG   ++V   MK+G + + +   ++ P +   +     L  A+G+ Y
Sbjct: 93  SLLGICLRS---EG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLI--GFGLQVAKGMKY 146
Query: 410 LHFGAQPAIFHRDIKA 425
           L   A     HRD+ A
Sbjct: 147 L---ASKKFVHRDLAA 159

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 26/145 (17%)
Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVR 345
            F +  ++G G +G VYKGL +P+G +    VA+K  +   S   +     E  V+ASV 
Sbjct: 13  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN---GPK--LSWPLRQSIA 400
           + ++  L G C+ +T        ++  LM  G + D++       G +  L+W       
Sbjct: 73  NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 120
Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
           +  A G+ YL       + HRD+ A
Sbjct: 121 VQIAEGMNYLE---DRRLVHRDLAA 142

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	425
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-66
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-62
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-56
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-40
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-34
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-32
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-30
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-30
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-30
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-29
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-29
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-28
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-27
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-27
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-27
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-27
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-27
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-26
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-19
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-17
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-17
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-16
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-16
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-16
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-15
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-15
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-15
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-15
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-15
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-15
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-15
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-15
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-15
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-15
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-15
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-14
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-14
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-14
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-14
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-14
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-14
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-14
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-14
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-14
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-14
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-13
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-13
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-13
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-13
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-13
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-13
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-13
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-12
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-12
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-12
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-12
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-12
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-12
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-11
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-11
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-11
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-11
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-11
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	8e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-10
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-10
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-10
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-10
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-09
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-09
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-09
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-09
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-08
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-08
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-08
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-08
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-08
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-08
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	7e-08
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	8e-08
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	9e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-07
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-07
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-07
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-07
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-07
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-07
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-06
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	9e-06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	7e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-04
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	5e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	5e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	8e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	8e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  214 bits (548), Expect = 1e-66
 Identities = 72/152 (47%), Positives = 94/152 (61%), Gaps = 8/152 (5%)

Query: 277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAG-DATFK 335
            L RF+  +++ A+ NFS  NI+GRGG+G VYKG L DG+ VA+KR K     G +  F+
Sbjct: 16  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQ 75

Query: 336 HEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF--ASNGPKLSW 393
            EVE+I+   H NL+ LRG+C+        +R++V   M NGSV   L     + P L W
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCM-----TPTERLLVYPYMANGSVASCLRERPESQPPLDW 130

Query: 394 PLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           P RQ IALG+ARGLAYLH    P I HRD+KA
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  203 bits (520), Expect = 1e-62
 Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 10/158 (6%)

Query: 270 ESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA 329
            S        R    D+++AT NF    +IG G +G VYKG+L DG++VALKR    S+ 
Sbjct: 18  SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ 77

Query: 330 GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP 389
           G   F+ E+E ++  RH +LV+L G+C      E ++ I++   M+NG++  HL+ S+ P
Sbjct: 78  GIEEFETEIETLSFCRHPHLVSLIGFCD-----ERNEMILIYKYMENGNLKRHLYGSDLP 132

Query: 390 K--LSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
              +SW  R  I +G ARGL YLH     AI HRD+K+
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKS 167

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  188 bits (479), Expect = 1e-56
 Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 20/162 (12%)

Query: 275 STNLVRFTFDDIKKATRNFSR------DNIIGRGGYGNVYKGLLPDGSEVALKRFKNC-- 326
            T    F+F ++K  T NF         N +G GG+G VYKG + + + VA+K+      
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVD 67

Query: 327 --SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF 384
             +      F  E++V+A  +H NLV L G+       +G    +V   M NGS+ D L 
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDRLS 122

Query: 385 ASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             +G P LSW +R  IA G A G+ +LH   +    HRDIK+
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKS 161

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  146 bits (369), Expect = 1e-40
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)

Query: 273 HESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDA 332
           H  ++ V    +++   +       +  RG +G V+K        VA+K F         
Sbjct: 6   HHHSSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKA-QLLNEYVAVKIFPIQDKQSWQ 64

Query: 333 TFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLS 392
             ++EV  +  ++H N++   G     T ++     ++    + GS+ D L       +S
Sbjct: 65  -NEYEVYSLPGMKHENILQFIGAEKRGTSVDV-DLWLITAFHEKGSLSDFL---KANVVS 119

Query: 393 WPLRQSIALGTARGLAYLH-------FGAQPAIFHRDIKA 425
           W     IA   ARGLAYLH        G +PAI HRDIK+
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  129 bits (326), Expect = 3e-34
 Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 15/155 (9%)

Query: 279 VRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEV 338
           +     +      N     +IGRG YG VYKG L D   VA+K F   +      F +E 
Sbjct: 1   MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEK 56

Query: 339 EV--IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR 396
            +  +  + H N+          T     + ++V +   NGS+  +L   +     W   
Sbjct: 57  NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSS 113

Query: 397 QSIALGTARGLAYLH------FGAQPAIFHRDIKA 425
             +A    RGLAYLH         +PAI HRD+ +
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  121 bits (307), Expect = 4e-32
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVNLVALRG 354
             +     G ++KG    G+++ +K  K  + S      F  E   +    H N++ + G
Sbjct: 16  TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA 414
            C            ++   M  GS+Y+ L       +        AL  ARG+A+LH   
Sbjct: 75  AC---QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TL 130

Query: 415 QPAIFHRDIK 424
           +P I    + 
Sbjct: 131 EPLIPRHALN 140

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  118 bits (299), Expect = 1e-30
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVNLVALRG 354
             IG G +G V++     GS+VA+K     +  A     F  EV ++  +RH N+V   G
Sbjct: 43  EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFG 413
                  L      IV + +  GS+Y  L  S    +L    R S+A   A+G+ YLH  
Sbjct: 102 AVTQPPNL-----SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-N 155

Query: 414 AQPAIFHRDIK 424
             P I HR++K
Sbjct: 156 RNPPIVHRNLK 166

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  118 bits (297), Expect = 1e-30
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 17/136 (12%)

Query: 297 NIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDAT-------FKHEVEVIASVRHVN 348
             IG+GG+G V+KG L+ D S VA+K      + G+         F+ EV +++++ H N
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V L G          +   +V + +  G +Y  L       + W ++  + L  A G+ 
Sbjct: 85  IVKLYGLMH-------NPPRMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIE 136

Query: 409 YLHFGAQPAIFHRDIK 424
           Y+     P I HRD++
Sbjct: 137 YMQ-NQNPPIVHRDLR 151

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  116 bits (293), Expect = 8e-30
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
           + ++GRG +G V K       +VA+K+ ++ S      F  E+  ++ V H N+V L G 
Sbjct: 13  EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGA 69

Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFAS-NGPKLSWPLRQSIALGTARGLAYLHFGA 414
           C+       +   +V +  + GS+Y+ L  +   P  +     S  L  ++G+AYLH   
Sbjct: 70  CL-------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122

Query: 415 QPAIFHRDIK 424
             A+ HRD+K
Sbjct: 123 PKALIHRDLK 132

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  114 bits (288), Expect = 2e-29
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)

Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFK----NCSAAGDATFKHEVEVIASVRHVNLVAL 352
            IIG GG+G VY+     G EVA+K  +       +      + E ++ A ++H N++AL
Sbjct: 13  EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF 412
           RG C+    L      +V +  + G +   L   +G ++   +  + A+  ARG+ YLH 
Sbjct: 72  RGVCLKEPNL-----CLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHD 123

Query: 413 GAQPAIFHRDIKA 425
            A   I HRD+K+
Sbjct: 124 EAIVPIIHRDLKS 136

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  114 bits (288), Expect = 4e-29
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 13/131 (9%)

Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVNLVALRG 354
            +IG+G +G VY G      EVA++       +      FK EV      RH N+V   G
Sbjct: 39  ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA 414
            C++   L      I+  L K  ++Y  +       L     + IA    +G+ YLH   
Sbjct: 97  ACMSPPHL-----AIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLH--- 147

Query: 415 QPAIFHRDIKA 425
              I H+D+K+
Sbjct: 148 AKGILHKDLKS 158

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  112 bits (283), Expect = 2e-28
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)

Query: 291 RNFSRD----NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV--IASV 344
           R  +RD      +G+G YG V++G    G  VA+K F   S+  + ++  E E+     +
Sbjct: 4   RTVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVML 59

Query: 345 RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTA 404
           RH N++      + +      Q  ++    + GS+YD+L       L       I L  A
Sbjct: 60  RHENILGFIASDMTSRHSST-QLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIA 115

Query: 405 RGLAYLH-----FGAQPAIFHRDIK 424
            GLA+LH        +PAI HRD+K
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLK 140

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  110 bits (277), Expect = 2e-27
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)

Query: 296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV--IASVRHVNLVALR 353
              IG+G YG V+ G    G +VA+K F       +A++  E E+     +RH N++   
Sbjct: 42  VKQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFI 97

Query: 354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH-- 411
              I  T     Q  ++ D  +NGS+YD+L       L       +A  +  GL +LH  
Sbjct: 98  AADIKGTGSW-TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTE 153

Query: 412 ---FGAQPAIFHRDIK 424
                 +PAI HRD+K
Sbjct: 154 IFSTQGKPAIAHRDLK 169

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  109 bits (274), Expect = 4e-27
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
            ++G+G +G   K      G  + +K           TF  EV+V+  + H N++   G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
                +L       + + +K G++   +  S   +  W  R S A   A G+AYLH    
Sbjct: 76  LYKDKRL-----NFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLH---S 126

Query: 416 PAIFHRDIKA 425
             I HRD+ +
Sbjct: 127 MNIIHRDLNS 136

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  107 bits (270), Expect = 7e-27
 Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 14/129 (10%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
           IG G +G VYKG      +VA+K       +      FK+EV V+   RHVN++   GY 
Sbjct: 32  IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89

Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP 416
                    Q  IV    +  S+Y HL  ++  K        IA  TARG+ YLH     
Sbjct: 90  T------APQLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLH---AK 139

Query: 417 AIFHRDIKA 425
           +I HRD+K+
Sbjct: 140 SIIHRDLKS 148

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  109 bits (273), Expect = 8e-27
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)

Query: 296 DNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEV--IASVRHVNLVALR 353
              IG+G +G V++G    G EVA+K F    +  + ++  E E+     +RH N++   
Sbjct: 47  QESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFI 102

Query: 354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH-- 411
                       Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH  
Sbjct: 103 AADNKDNGTW-TQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHME 158

Query: 412 ---FGAQPAIFHRDIK 424
                 +PAI HRD+K
Sbjct: 159 IVGTQGKPAIAHRDLK 174

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 85.5 bits (212), Expect = 6e-19
 Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 19/175 (10%)

Query: 254 RKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGL-L 312
           +++R +++ +  E+  +++  S +             R    D  IGRG +  VYKGL  
Sbjct: 1   QEERNQQQDDIEELETKAVGMSND------------GRFLKFDIEIGRGSFKTVYKGLDT 48

Query: 313 PDGSEVALKRFKNCSAAGDA--TFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV 370
               EVA    ++          FK E E++  ++H N+V       +T + +    ++V
Sbjct: 49  ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI-VLV 107

Query: 371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
            +LM +G++  +L       +   + +S      +GL +LH    P I HRD+K 
Sbjct: 108 TELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKC 159

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 16/139 (11%)

Query: 294 SRDNI-----IGRGGYGNVYKGLL-PDGSEVALKRFK-NCSAAGDATFKHEVEVIASVRH 346
           + +++     IGRG +G V+ G L  D + VA+K  +        A F  E  ++    H
Sbjct: 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSH 171

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            N+V L G C      +     IV +L++ G     L  + G +L       +    A G
Sbjct: 172 PNIVRLIGVC-----TQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAG 225

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           + YL   ++  I HRD+ A
Sbjct: 226 MEYLE--SKCCI-HRDLAA 241

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 80.5 bits (199), Expect = 4e-17
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 7/137 (5%)

Query: 291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNL 349
           +++     +G GG+  V     L DG   ALKR            + E ++     H N+
Sbjct: 29  KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--FASNGPKLSWPLRQSIALGTARGL 407
           + L  YC+       H+  ++    K G++++ +      G  L+      + LG  RGL
Sbjct: 89  LRLVAYCLRERG-AKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147

Query: 408 AYLHFGAQPAIFHRDIK 424
             +H        HRD+K
Sbjct: 148 EAIH---AKGYAHRDLK 161

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 76.9 bits (190), Expect = 4e-16
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 16/138 (11%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
              +    IG G +G V+ G   +  +VA+K  +  + + +  F  E EV+  + H  LV
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLV 66

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L G C     LE     +V + M++G + D+L  +     +      + L    G+AYL
Sbjct: 67  QLYGVC-----LEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYL 120

Query: 411 ---HFGAQPAIFHRDIKA 425
                       HRD+ A
Sbjct: 121 EEACV------IHRDLAA 132

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 77.3 bits (191), Expect = 4e-16
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 17/139 (12%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV 347
             R+ +     +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H 
Sbjct: 10  VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQ 68

Query: 348 NLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            LV L       TQ    + I I+ + M+NGS+ D L   +G KL+      +A   A G
Sbjct: 69  RLVRLYAVV---TQ----EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           +A++    +    HRD++A
Sbjct: 122 MAFI---EERNYIHRDLRA 137

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 76.5 bits (189), Expect = 6e-16
 Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 21/141 (14%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV 347
             R+ I     +G G +G V  G      +VA+K  K  S + D  F  E + +  + H 
Sbjct: 5   LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE-FFQEAQTMMKLSHP 63

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
            LV   G C      + +   IV + + NG + ++L  S+G  L       +      G+
Sbjct: 64  KLVKFYGVC-----SKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGM 117

Query: 408 AYL---HFGAQPAIFHRDIKA 425
           A+L    F       HRD+ A
Sbjct: 118 AFLESHQF------IHRDLAA 132

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 16/138 (11%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           ++ +    +G G +G V  G      +VA+K  K  S + D  F  E +V+ ++ H  LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLV 82

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L G C      +     I+ + M NG + ++L      +        +       + YL
Sbjct: 83  QLYGVC-----TKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYL 136

Query: 411 ---HFGAQPAIFHRDIKA 425
               F       HRD+ A
Sbjct: 137 ESKQF------LHRDLAA 148

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 20/170 (11%)

Query: 273 HESTNLVRFTFDDIKKATRN--FSRDNI-----IGRGGYGNVYKGLLPDGSE----VALK 321
           H S+ LV    ++++    +    R+ +     +G G +G+V +G L         VA+K
Sbjct: 9   HHSSGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVK 68

Query: 322 RFK--NCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSV 379
             K  N S      F  E   +    H N++ L G CI  +     + +++   MK G +
Sbjct: 69  TMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL 128

Query: 380 YDHLFASNGPKLSWPLRQ----SIALGTARGLAYLHFGAQPAIFHRDIKA 425
           + +L  S        +         +  A G+ YL   +     HRD+ A
Sbjct: 129 HTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAA 175

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 75.7 bits (187), Expect = 1e-15
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 15/138 (10%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV 347
            +   +     IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH 
Sbjct: 18  LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA--FLAEASVMTQLRHS 74

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           NLV L G      + +G   I+  + M  GS+ D+L +     L        +L     +
Sbjct: 75  NLVQLLGVI---VEEKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130

Query: 408 AYLHFGAQPAIFHRDIKA 425
            YL         HRD+ A
Sbjct: 131 EYL---EGNNFVHRDLAA 145

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 15/147 (10%)

Query: 284 DDIKKATRNFSRDNI-----IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEV 338
             + K      R+++     +G+G +G V+ G     + VA+K  K  + + +A F  E 
Sbjct: 172 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEA 230

Query: 339 EVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQS 398
           +V+  +RH  LV L                IV + M  GS+ D L    G  L  P    
Sbjct: 231 QVMKKLRHEKLVQLYAVVS------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIKA 425
           +A   A G+AY+    +    HRD++A
Sbjct: 285 MAAQIASGMAYV---ERMNYVHRDLRA 308

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 27/149 (18%), Positives = 58/149 (38%), Gaps = 28/149 (18%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLL--------PDGSEVALKRFKNCSAAGDATFKHEVE 339
              +++     +G+G +  ++KG+            +EV LK           +F     
Sbjct: 5   IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAAS 64

Query: 340 VIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSI 399
           +++ + H +LV   G C     + G + I+V + +K GS+  +L   N   ++   +  +
Sbjct: 65  MMSKLSHKHLVLNYGVC-----VCGDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEV 118

Query: 400 ALGTARGLAYL---HFGAQPAIFHRDIKA 425
           A   A  + +L            H ++ A
Sbjct: 119 AKQLAAAMHFLEENTL------IHGNVCA 141

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 75.0 bits (185), Expect = 3e-15
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 24/157 (15%)

Query: 282 TFDDIKKATRNFSRDNI-----IGRGGYGNVYKGLL--PDGSE--VALKRFKNCSAAGDA 332
               ++      S   +     IGRG +G VY G L   DG +   A+K     +  G+ 
Sbjct: 11  LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 70

Query: 333 T-FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKL 391
           + F  E  ++    H N+++L G C    + EG   ++V   MK+G + + +  +     
Sbjct: 71  SQFLTEGIIMKDFSHPNVLSLLGIC---LRSEG-SPLVVLPYMKHGDLRNFI-RNETHNP 125

Query: 392 SWPLRQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
           +        L  A+G+ YL    F       HRD+ A
Sbjct: 126 TVKDLIGFGLQVAKGMKYLASKKF------VHRDLAA 156

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 76.3 bits (188), Expect = 3e-15
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 12/130 (9%)

Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
             +G G +G V+       ++VA+K  K  S + +A F  E  V+ +++H  LV L    
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVV 252

Query: 357 IATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
                    + I I+ + M  GS+ D L +  G K   P     +   A G+A++    Q
Sbjct: 253 T-------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQ 302

Query: 416 PAIFHRDIKA 425
               HRD++A
Sbjct: 303 RNYIHRDLRA 312

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 76.1 bits (187), Expect = 4e-15
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 10/129 (7%)

Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
             +G+G +G V+ G     + VA+K  K  + + +A F  E +V+  +RH  LV L    
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVV 331

Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP 416
                       IV + M  GS+ D L    G  L  P    +A   A G+AY+    + 
Sbjct: 332 S------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERM 382

Query: 417 AIFHRDIKA 425
              HRD++A
Sbjct: 383 NYVHRDLRA 391

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 74.2 bits (183), Expect = 5e-15
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 15/139 (10%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGS-EVALKRFKNCSAAGDATFKHEVEVIASVRH 346
             R +I     +G G YG VY+G+    S  VA+K  K  +   +  F  E  V+  ++H
Sbjct: 10  MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKH 68

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            NLV L G C            I+ + M  G++ D+L   N  ++S  +   +A   +  
Sbjct: 69  PNLVQLLGVC-----TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           + YL    +    HRD+ A
Sbjct: 124 MEYL---EKKNFIHRDLAA 139

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 74.2 bits (183), Expect = 5e-15
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 13/135 (9%)

Query: 296 DNIIGRGGYGNVYKGLLPDGSE----VALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
           D +IG+G +G VY G   D ++     A+K     +       F  E  ++  + H N++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
           AL G        EG   +++   M +G +   +  S     +     S  L  ARG+ YL
Sbjct: 86  ALIGIM---LPPEGLPHVLL-PYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYL 140

Query: 411 HFGAQPAIFHRDIKA 425
              A+    HRD+ A
Sbjct: 141 ---AEQKFVHRDLAA 152

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 74.6 bits (184), Expect = 5e-15
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSE-----VALKRFKNCSAAGDAT-FKHEVEVIASVR 345
            F +  ++G G +G VYKGL     E     VA+K  +  ++         E  V+ASV 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR 405
           + ++  L G C            ++  LM  G + D++   +   +      +  +  A+
Sbjct: 76  NPHVCRLLGIC------LTSTVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 128

Query: 406 GLAYL---HFGAQPAIFHRDIKA 425
           G+ YL            HRD+ A
Sbjct: 129 GMNYLEDRRL------VHRDLAA 145

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 74.8 bits (184), Expect = 6e-15
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 24/157 (15%)

Query: 282 TFDDIKKATRNFSRDNI-----IGRGGYGNVYKGLLPDGSE----VALKRFKNCSAAGDA 332
               ++      S   +     IGRG +G VY G L D        A+K     +  G+ 
Sbjct: 75  LVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV 134

Query: 333 T-FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKL 391
           + F  E  ++    H N+++L G C    + EG   ++V   MK+G + + +  +     
Sbjct: 135 SQFLTEGIIMKDFSHPNVLSLLGIC---LRSEG-SPLVVLPYMKHGDLRNFI-RNETHNP 189

Query: 392 SWPLRQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
           +        L  A+G+ +L    F       HRD+ A
Sbjct: 190 TVKDLIGFGLQVAKGMKFLASKKF------VHRDLAA 220

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 20/137 (14%)

Query: 296 DNIIGRGGYGNVYKGLLPDGSE---VALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLVA 351
           D  +G G +G+V +G+     +   VA+K  K  +   D      E +++  + +  +V 
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL- 410
           L G C      +    ++V ++   G ++  L      ++       +    + G+ YL 
Sbjct: 75  LIGVC------QAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLE 127

Query: 411 --HFGAQPAIFHRDIKA 425
             +F       HRD+ A
Sbjct: 128 EKNF------VHRDLAA 138

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 73.6 bits (181), Expect = 1e-14
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 17/143 (11%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLP-----DGSEVALKRFKNCSAAGDATFKHEVEVIA 342
           F   ++     +G+G +G+V            G  VA+K+ ++ +      F+ E+E++ 
Sbjct: 38  FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALG 402
           S++H N+V  +G C            ++ + +  GS+ D+L   +  ++           
Sbjct: 98  SLQHDNIVKYKGVC---YSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQ 153

Query: 403 TARGLAYLHFGAQPAIFHRDIKA 425
             +G+ YL    +  I HRD+  
Sbjct: 154 ICKGMEYLG--TKRYI-HRDLAT 173

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 74.8 bits (184), Expect = 1e-14
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 10/130 (7%)

Query: 297 NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
           + +G G YG VY+G+       VA+K  K  +   +  F  E  V+  ++H NLV L G 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 284

Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
           C            I+ + M  G++ D+L   N  ++S  +   +A   +  + YL    +
Sbjct: 285 C-----TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KK 337

Query: 416 PAIFHRDIKA 425
             I HR++ A
Sbjct: 338 NFI-HRNLAA 346

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
           ++G+G YG VY G  L +   +A+K      +        E+ +   ++H N+V   G  
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-- 86

Query: 357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP-KLSWPLRQSIALGTARGLAYLHFGAQ 415
              +  E     I  + +  GS+   L +  GP K +             GL YLH    
Sbjct: 87  ---SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---D 140

Query: 416 PAIFHRDIKA 425
             I HRDIK 
Sbjct: 141 NQIVHRDIKG 150

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 73.5 bits (181), Expect = 1e-14
 Identities = 28/144 (19%), Positives = 62/144 (43%), Gaps = 19/144 (13%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLP-----DGSEVALKRFKNCSAAGDATFKHEVEVIA 342
           F   ++     +G+G +G+V            G+ VA+K+ ++        F+ E++++ 
Sbjct: 20  FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
           ++    +V  RG         G Q + +V + + +G + D L   +  +L        + 
Sbjct: 80  ALHSDFIVKYRGVSYGP----GRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSS 134

Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
              +G+ YL   ++  + HRD+ A
Sbjct: 135 QICKGMEYLG--SRRCV-HRDLAA 155

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 18/144 (12%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLP-----DGSEVALKRFKNCSAAGDAT-FKHEVEVI 341
           F +  +     +G G +G V            G +VA+K  K  S        K E+E++
Sbjct: 18  FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 77

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
            ++ H N+V  +G C   T+  G+   ++ + + +GS+ ++L   N  K++   +   A+
Sbjct: 78  RNLYHENIVKYKGIC---TEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAV 133

Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
              +G+ YL         HRD+ A
Sbjct: 134 QICKGMDYL---GSRQYVHRDLAA 154

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 21/137 (15%)

Query: 298 IIGRGGYGNVYKGLL--PDGSE---VALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVA 351
           +IG G +G VYKG+L    G +   VA+K  K   +      F  E  ++    H N++ 
Sbjct: 51  VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL- 410
           L G        +    +I+ + M+NG++   L      + S      +  G A G+ YL 
Sbjct: 111 LEGVI-----SKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYLA 164

Query: 411 --HFGAQPAIFHRDIKA 425
             ++       HRD+ A
Sbjct: 165 NMNY------VHRDLAA 175

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 17/143 (11%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLP-----DGSEVALKRFKNCSAAGDATFKHEVEVIA 342
           F   ++     +G+G +G+V            G  VA+K+ ++ +      F+ E+E++ 
Sbjct: 7   FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALG 402
           S++H N+V  +G C            ++ + +  GS+ D+L   +  ++           
Sbjct: 67  SLQHDNIVKYKGVC---YSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQ 122

Query: 403 TARGLAYLHFGAQPAIFHRDIKA 425
             +G+ YL    +  I HRD+  
Sbjct: 123 ICKGMEYLG--TKRYI-HRDLAT 142

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 73.5 bits (181), Expect = 2e-14
 Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 15/138 (10%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV 347
            +   +     IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH 
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA--FLAEASVMTQLRHS 246

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           NLV L G      + E     IV + M  GS+ D+L +     L        +L     +
Sbjct: 247 NLVQLLGVI---VE-EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302

Query: 408 AYLHFGAQPAIFHRDIKA 425
            YL         HRD+ A
Sbjct: 303 EYL---EGNNFVHRDLAA 317

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 71.6 bits (176), Expect = 3e-14
 Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 23/153 (15%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAAGDATFKHEVEVIAS 343
           K+   +F    +IG GG+G V+K     DG    +K  ++ N  A      + EV+ +A 
Sbjct: 7   KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA------EREVKALAK 60

Query: 344 VRHVNLVALRGY-----------CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLS 392
           + HVN+V   G               +++ +     I  +    G++   +    G KL 
Sbjct: 61  LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120

Query: 393 WPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             L   +     +G+ Y+H      + +RD+K 
Sbjct: 121 KVLALELFEQITKGVDYIH---SKKLINRDLKP 150

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 72.4 bits (178), Expect = 3e-14
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSE-----VALKRFKNCSAAGDAT-FKHEVEVIASVR 345
            F +  ++G G +G VYKGL     E     VA+K  +  ++         E  V+ASV 
Sbjct: 16  EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR 405
           + ++  L G C            ++  LM  G + D++   +   +      +  +  A+
Sbjct: 76  NPHVCRLLGIC------LTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAK 128

Query: 406 GLAYL---HFGAQPAIFHRDIKA 425
           G+ YL            HRD+ A
Sbjct: 129 GMNYLEDRRL------VHRDLAA 145

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 72.8 bits (179), Expect = 3e-14
 Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 29/162 (17%)

Query: 281 FTFDDIKKATRNFS----RDNI-----IGRGGYGNVYKGLL--PDGSE--VALKRFK-NC 326
            TF+D  +    F+      NI     +G G +G V  G L  P   E  VA+K  K   
Sbjct: 26  HTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85

Query: 327 SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS 386
           +      F  E  ++    H N++ L G        +    +IV + M+NGS+   L   
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKSKPVMIVTEYMENGSLDSFL-RK 139

Query: 387 NGPKLSWPLRQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
           +  + +      +  G A G+ YL    +       HRD+ A
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGY------VHRDLAA 175

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 72.0 bits (177), Expect = 4e-14
 Identities = 29/149 (19%), Positives = 54/149 (36%), Gaps = 19/149 (12%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE----VALKRFK--NCSAAGDATFKHEVEVI 341
                      +G+G +G+V +  L         VA+K  K    +++    F  E   +
Sbjct: 20  IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQ--- 397
               H ++  L G  + +          ++   MK+G ++  L AS   +  + L     
Sbjct: 80  KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139

Query: 398 -SIALGTARGLAYLHFGAQPAIFHRDIKA 425
               +  A G+ YL   +     HRD+ A
Sbjct: 140 VRFMVDIACGMEYL---SSRNFIHRDLAA 165

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 71.6 bits (176), Expect = 5e-14
 Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 21/151 (13%)

Query: 286 IKKATRNFSRDNI-----IGRGGYGNVYKGLLPDGSE-----VALKRFKNCSAAGDAT-F 334
           +K   R F    +     +G G +G V+KG+     E     V +K  ++ S        
Sbjct: 3   MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 62

Query: 335 KHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWP 394
              +  I S+ H ++V L G C  ++        +V   +  GS+ DH+   +   L   
Sbjct: 63  TDHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHV-RQHRGALGPQ 115

Query: 395 LRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           L  +  +  A+G+ YL    +  + HR++ A
Sbjct: 116 LLLNWGVQIAKGMYYL---EEHGMVHRNLAA 143

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 71.6 bits (176), Expect = 5e-14
 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 29/162 (17%)

Query: 281 FTFDDIKKATRNFSR---------DNIIGRGGYGNVYKGLLPDGSE----VALKRFKNCS 327
            T+++  +A R+F+R         + IIG G  G V  G L    +    VA+K  K   
Sbjct: 30  HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY 89

Query: 328 AAGDAT-FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS 386
                  F  E  ++    H N++ L G         G   +IV + M+NGS+   L  +
Sbjct: 90  TERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRGRLAMIVTEYMENGSLDTFL-RT 143

Query: 387 NGPKLSWPLRQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
           +  + +      +  G   G+ YL    +       HRD+ A
Sbjct: 144 HDGQFTIMQLVGMLRGVGAGMRYLSDLGY------VHRDLAA 179

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 73.1 bits (179), Expect = 5e-14
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 20/138 (14%)

Query: 295 RDNIIGRGGYGNVYKGLLPDGSE---VALKRFKNCSAAGDAT-FKHEVEVIASVRHVNLV 350
            D  +G G +G+V +G+     +   VA+K  K  +   D      E +++  + +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L G C      +    ++V ++   G ++  L      ++       +    + G+ YL
Sbjct: 400 RLIGVC------QAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYL 452

Query: 411 ---HFGAQPAIFHRDIKA 425
              +F       HR++ A
Sbjct: 453 EEKNF------VHRNLAA 464

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 70.7 bits (174), Expect = 7e-14
 Identities = 36/144 (25%), Positives = 53/144 (36%), Gaps = 23/144 (15%)

Query: 292 NFSRDNIIGRGGYGNVYKGLL--PDGSE--VALKRFKNCSAAGDAT---FKHEVEVIASV 344
           +      +G G +G V +G    P G    VA+K  K    +       F  EV  + S+
Sbjct: 19  DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78

Query: 345 RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTA 404
            H NL+ L G  +           +V +L   GS+ D L   +            A+  A
Sbjct: 79  DHRNLIRLYGVVL------TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVA 131

Query: 405 RGLAYL---HFGAQPAIFHRDIKA 425
            G+ YL    F       HRD+ A
Sbjct: 132 EGMGYLESKRF------IHRDLAA 149

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 70.5 bits (173), Expect = 1e-13
 Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 7/160 (4%)

Query: 269 LESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS 327
           + S   + +L       ++     F    ++G G YG VYKG  +  G   A+K   + +
Sbjct: 2   MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVT 60

Query: 328 AAGDATFKHEVEVIASV-RHVNLVALRG-YCIATTQLEGHQRIIVCDLMKNGSVYDHLFA 385
              +   K E+ ++     H N+    G +          Q  +V +    GSV D +  
Sbjct: 61  GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 120

Query: 386 SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           + G  L       I     RGL++LH   Q  + HRDIK 
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKG 157

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 21/136 (15%)

Query: 298 IIGRGGYGNVYKGLL--PDGSE--VALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVAL 352
           I+G G +G VY+G+     G +  VA+K  K +C+      F  E  ++ ++ H ++V L
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL-- 410
            G        E     I+ +L   G +  +L   N   L        +L   + +AYL  
Sbjct: 79  IGII------EEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLES 131

Query: 411 -HFGAQPAIFHRDIKA 425
            +        HRDI  
Sbjct: 132 INC------VHRDIAV 141

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 21/136 (15%)

Query: 298 IIGRGGYGNVYKGLL--PDGSE--VALKRFK-NCSAAGDATFKHEVEVIASVRHVNLVAL 352
            IG G +G+V++G+   P+     VA+K  K   S +    F  E   +    H ++V L
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL-- 410
            G          +   I+ +L   G +   L       L        A   +  LAYL  
Sbjct: 82  IGVI------TENPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLES 134

Query: 411 -HFGAQPAIFHRDIKA 425
             F       HRDI A
Sbjct: 135 KRF------VHRDIAA 144

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 11/156 (7%)

Query: 273 HESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAA 329
           H S+ +   T +   ++   + R   IG G +G         DG +  +K       S+ 
Sbjct: 6   HHSSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK 65

Query: 330 GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP 389
                + EV V+A+++H N+V  R        L      IV D  + G ++  + A  G 
Sbjct: 66  EREESRREVAVLANMKHPNIVQYRESFEENGSL-----YIVMDYCEGGDLFKRINAQKGV 120

Query: 390 KLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
                      +     L ++H      I HRDIK+
Sbjct: 121 LFQEDQILDWFVQICLALKHVH---DRKILHRDIKS 153

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 69.8 bits (171), Expect = 3e-13
 Identities = 32/176 (18%), Positives = 57/176 (32%), Gaps = 16/176 (9%)

Query: 251 SNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKG 310
                   + +    E         T  ++    + ++     +    +GRG +G V++ 
Sbjct: 18  KTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRM 77

Query: 311 L-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII 369
                G + A+K+ +            E+   A +    +V L G        EG    I
Sbjct: 78  KDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG-----AVREGPWVNI 127

Query: 370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             +L++ GS+   +       L              GL YLH      I H D+KA
Sbjct: 128 FMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA 178

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 70.7 bits (173), Expect = 3e-13
 Identities = 46/213 (21%), Positives = 71/213 (33%), Gaps = 36/213 (16%)

Query: 236 LISGGVWIFW-RKRVVSNRRKKREREEVNRIEMGLESIHESTNLVR---------FTFDD 285
           L++G    F  R +    R      +  N  + G+ S   S +             T+  
Sbjct: 320 LVNGATQSFIIRPQKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTM 379

Query: 286 IKKATRNFSRDNI-----IGRGGYGNVYKGLL--PDGSE--VALKRFK-NCSAAGDATFK 335
                    R+ I     IG G +G+V++G+   P+     VA+K  K   S +    F 
Sbjct: 380 PSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL 439

Query: 336 HEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPL 395
            E   +    H ++V L G          +   I+ +L   G +   L       L    
Sbjct: 440 QEALTMRQFDHPHIVKLIGVI------TENPVWIIMELCTLGELRSFL-QVRKFSLDLAS 492

Query: 396 RQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
               A   +  LAYL    F       HRDI A
Sbjct: 493 LILYAYQLSTALAYLESKRF------VHRDIAA 519

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 31/153 (20%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLL----PDGSE--VALKRFK-NCSAAGDATFKHEVEV 340
             R NI     +G G +G VY+G +     D S   VA+K     CS   +  F  E  +
Sbjct: 27  VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS-----NGPKLSWPL 395
           I+   H N+V   G       L+   R I+ +LM  G +   L  +         L+   
Sbjct: 87  ISKFNHQNIVRCIGVS-----LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD 141

Query: 396 RQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
              +A   A G  YL   HF       HRDI A
Sbjct: 142 LLHVARDIACGCQYLEENHF------IHRDIAA 168

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 22/139 (15%)

Query: 295 RDNIIGRGGYGNVYKGLLPDGS---EVALKRFKNCSAAGDAT--FKHEVEVIASVRHVNL 349
            D  +G G +G V KG          VA+K  KN +           E  V+  + +  +
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           V + G C      E    ++V ++ + G +  +L       +       +    + G+ Y
Sbjct: 81  VRMIGIC------EAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKY 132

Query: 410 L---HFGAQPAIFHRDIKA 425
           L   +F       HRD+ A
Sbjct: 133 LEESNF------VHRDLAA 145

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 68.8 bits (169), Expect = 3e-13
 Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 39/161 (24%)

Query: 293 FSRDNI-----IGRGGYGNVYKG----LLPDGSE--VALKRFKNCSAAGDATFKHEVEVI 341
             R +I     +G G +G V+      L P   +  VA+K  K+ + A    F+ E E++
Sbjct: 12  IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--------------FASN 387
            +++H ++V   G C      +G   I+V + MK+G +   L                  
Sbjct: 72  TNLQHEHIVKFYGVC-----GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126

Query: 388 GPKLSWPLRQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
             +L       IA   A G+ YL   HF       HRD+  
Sbjct: 127 KGELGLSQMLHIASQIASGMVYLASQHF------VHRDLAT 161

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 68.9 bits (169), Expect = 4e-13
 Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 38/160 (23%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE------VALKRFKNCSAAGDATFKHEVEVI 341
             R +I     +G G +G V+     +         VA+K  K  S +    F+ E E++
Sbjct: 38  IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ---- 397
             ++H ++V   G C      EG   ++V + M++G +   L +           +    
Sbjct: 98  TMLQHQHIVRFFGVC-----TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152

Query: 398 ---------SIALGTARGLAYL---HFGAQPAIFHRDIKA 425
                    ++A   A G+ YL   HF       HRD+  
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLAT 186

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 68.5 bits (168), Expect = 5e-13
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 10/134 (7%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
           +     +G G +G VYK      G+  A K  +  S      +  E+E++A+  H  +V 
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
           L G           +  I+ +    G+V   +   +   L+ P  Q +       L +LH
Sbjct: 81  LLG-----AYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLH 134

Query: 412 FGAQPAIFHRDIKA 425
                 I HRD+KA
Sbjct: 135 ---SKRIIHRDLKA 145

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 68.5 bits (168), Expect = 5e-13
 Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 14/140 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR---FKNCSAAGDATFKHEVEVIASVRHV 347
           NF  +  IGRG +  VY+   L DG  VALK+   F    A   A    E++++  + H 
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--FASNGPKLSWPLRQSIALGTAR 405
           N++      I   +L      IV +L   G +   +  F      +         +    
Sbjct: 93  NVIKYYASFIEDNEL-----NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147

Query: 406 GLAYLHFGAQPAIFHRDIKA 425
            L ++H      + HRDIK 
Sbjct: 148 ALEHMH---SRRVMHRDIKP 164

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 68.1 bits (167), Expect = 5e-13
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 14/142 (9%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR--FKNCSAAGDATFKHEVEVIASV-R 345
           T  F     IG G +G+V+K +   DG   A+KR       +  +     EV   A + +
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--FASNGPKLSWPLRQSIALGT 403
           H ++V            E    +I  +    GS+ D +               + + L  
Sbjct: 70  HSHVVRYFS-----AWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
            RGL Y+H     ++ H DIK 
Sbjct: 125 GRGLRYIH---SMSLVHMDIKP 143

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 68.9 bits (168), Expect = 6e-13
 Identities = 22/209 (10%), Positives = 46/209 (22%), Gaps = 35/209 (16%)

Query: 246 RKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYG 305
            + ++   R++  +E    +E    ++             + +  R       +  G   
Sbjct: 18  EEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVD-SLLSQGERKLKLVEPLRVGDRS 76

Query: 306 NVYKGL-LPDGSEVALKRF---KNCSAAGDATFKHEVEVIASVRHVNLVALRGYC----- 356
            V+    +    + ALK F      S +            A +   +    R        
Sbjct: 77  VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136

Query: 357 IATTQLEGHQRII---------------------VCDLMKNGSVYDHLFASNGPKLSWPL 395
                ++                             DL    S  D ++   G       
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGD-EGILA 195

Query: 396 RQSIALGTARGLAYLHFGAQPAIFHRDIK 424
              +     R  A L       + H    
Sbjct: 196 LHILTAQLIRLAANLQ---SKGLVHGHFT 221

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 20/144 (13%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLL-----PDGSEVALKRFK-NCSAAGDATFKHEVEVI 341
           F +  +     +G G +G V            G  VA+K  K +      + +K E++++
Sbjct: 28  FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
            ++ H +++  +G C            +V + +  GS+ D+L       +        A 
Sbjct: 88  RTLYHEHIIKYKGCC---EDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQ 141

Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
               G+AYLH  AQ  I HRD+ A
Sbjct: 142 QICEGMAYLH--AQHYI-HRDLAA 162

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 31/153 (20%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGS------EVALKRFK-NCSAAGDATFKHEVEV 340
             R NI     +G G +G VY+G +          +VA+K     CS   +  F  E  +
Sbjct: 68  VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 127

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS---NGPKLSWPLRQ 397
           I+   H N+V   G       L+   R I+ +LM  G +   L  +        S  +  
Sbjct: 128 ISKFNHQNIVRCIGVS-----LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD 182

Query: 398 --SIALGTARGLAYL---HFGAQPAIFHRDIKA 425
              +A   A G  YL   HF       HRDI A
Sbjct: 183 LLHVARDIACGCQYLEENHF------IHRDIAA 209

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 6/140 (4%)

Query: 291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVN 348
                  ++  GG+  VY+   +  G E ALKR  +     +     EV  +  +  H N
Sbjct: 28  LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPN 87

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLM--KNGSVYDHLF-ASNGPKLSWPLRQSIALGTAR 405
           +V          +     +     L     G + + L    +   LS      I   T R
Sbjct: 88  IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147

Query: 406 GLAYLHFGAQPAIFHRDIKA 425
            + ++H   +P I HRD+K 
Sbjct: 148 AVQHMH-RQKPPIIHRDLKV 166

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 34/156 (21%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE------VALKRFK-NCSAAGDATFKHEVEV 340
            +R+ I     +G+G +G VY+G+     +      VA+K      S      F +E  V
Sbjct: 22  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ--- 397
           +      ++V L G        +G   +++ +LM  G +  +L +      + P+     
Sbjct: 82  MKEFNCHHVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136

Query: 398 -----SIALGTARGLAYL---HFGAQPAIFHRDIKA 425
                 +A   A G+AYL    F       HRD+ A
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKF------VHRDLAA 166

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 13/135 (9%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNLV 350
           F++   IG+G +G V+KG+       VA+K      A  +    + E+ V++      + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
              G     + L+  +  I+ + +  GS  D L    GP L      +I     +GL YL
Sbjct: 84  KYYG-----SYLKDTKLWIIMEYLGGGSALDLL--EPGP-LDETQIATILREILKGLDYL 135

Query: 411 HFGAQPAIFHRDIKA 425
           H        HRDIKA
Sbjct: 136 H---SEKKIHRDIKA 147

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 66.2 bits (162), Expect = 4e-12
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 13/136 (9%)

Query: 293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKH-EVEVIASVRHVNLVA 351
           ++   +IG G +G V++  L +  EVA+K+        D  FK+ E++++  V+H N+V 
Sbjct: 42  YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVD 96

Query: 352 LRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHL--FASNGPKLSWPLRQSIALGTARGLA 408
           L+ +  +    +    + +V + +   +VY     +A     +   L +       R LA
Sbjct: 97  LKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155

Query: 409 YLHFGAQPAIFHRDIK 424
           Y+H      I HRDIK
Sbjct: 156 YIH---SIGICHRDIK 168

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 65.1 bits (159), Expect = 6e-12
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 15/144 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT--FKHEVEVIASVRHVN 348
           +F     +GRGG+G V++     D    A+KR +       A      EV+ +A + H  
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR-LPNRELAREKVMREVKALAKLEHPG 64

Query: 349 LVALRGYCIATTQLEGHQRI-------IVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIA 400
           +V      +     E  Q         I   L +  ++ D +       +    +   I 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 401 LGTARGLAYLHFGAQPAIFHRDIK 424
           L  A  + +LH      + HRD+K
Sbjct: 125 LQIAEAVEFLH---SKGLMHRDLK 145

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 64.9 bits (159), Expect = 6e-12
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 40/162 (24%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE------VALKRFK-NCSAAGDATFKHEVEV 340
            S   +     +G   +G VYKG L   +       VA+K  K          F+HE  +
Sbjct: 6   ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 65

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--------------FAS 386
            A ++H N+V L G        +     ++     +G +++ L                +
Sbjct: 66  RARLQHPNVVCLLGVV-----TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120

Query: 387 NGPKLSWPLRQSIALGTARGLAYL---HFGAQPAIFHRDIKA 425
               L  P    +    A G+ YL   H        H+D+  
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHV------VHKDLAT 156

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNL 349
           ++    +IG G    V      P   +VA+KR               E++ ++   H N+
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYD--HLFASNGPKLSWPLRQS-IAL---GT 403
           V+        + +   +  +V  L+  GSV D      + G   S  L +S IA      
Sbjct: 76  VSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
             GL YLH      I HRD+KA
Sbjct: 131 LEGLEYLH--KNGQI-HRDVKA 149

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 20/161 (12%)

Query: 275 STNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKR-FKNCSAAGDA 332
           S N      +  +K    F  + + G+G +G V  G     G  VA+K+  +      D 
Sbjct: 7   SLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ------DP 60

Query: 333 TFKH----EVEVIASVRHVNLVALRGYCIATTQLEGHQRI---IVCDLMKNGSVYDHL-- 383
            F++     ++ +A + H N+V L+     T      + I   +V + +   +++     
Sbjct: 61  RFRNRELQIMQDLAVLHHPNIVQLQ-SYFYTLGERDRRDIYLNVVMEYV-PDTLHRCCRN 118

Query: 384 FASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
           +          L +       R +  LH  +   + HRDIK
Sbjct: 119 YYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIK 158

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 64.5 bits (157), Expect = 1e-11
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 13/138 (9%)

Query: 293 FSRDNIIGRG--GYGNVYKGL-LPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHV 347
           +    +IG+G      V      P G  V ++R     CS       + E+ V     H 
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           N+V  R      T +  ++  +V   M  GS  D +       ++      I  G  + L
Sbjct: 87  NIVPYRA-----TFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141

Query: 408 AYLHFGAQPAIFHRDIKA 425
            Y+H      + HR +KA
Sbjct: 142 DYIH--HMGYV-HRSVKA 156

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 27/148 (18%), Positives = 51/148 (34%), Gaps = 19/148 (12%)

Query: 283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKR--FKNCSAAGDATFKHEVEV 340
           F  +    R +S    IG GG   V++ L       A+K    +        ++++E+  
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79

Query: 341 IASVRHVNL--VALRGYCIATTQLEGHQRIIV--CDLMKNGSVYDHLFASNGPKLSWPLR 396
           +  ++  +   + L  Y I    +      +V  C    N  +   L       +    R
Sbjct: 80  LNKLQQHSDKIIRLYDYEITDQYI-----YMVMECG---NIDLNSWL--KKKKSIDPWER 129

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIK 424
           +S        +  +H   Q  I H D+K
Sbjct: 130 KSYWKNMLEAVHTIH---QHGIVHSDLK 154

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 12/137 (8%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN 348
              F     +G G YG+VYK +    G  VA+K+    S   +     E+ ++      +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQE--IIKEISIMQQCDSPH 85

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V   G     +  +     IV +    GSV D +   N   L+     +I   T +GL 
Sbjct: 86  VVKYYG-----SYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLE 139

Query: 409 YLHFGAQPAIFHRDIKA 425
           YLH        HRDIKA
Sbjct: 140 YLH---FMRKIHRDIKA 153

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 17/142 (11%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT-FKHEVEVIASVRHVNL 349
            +     +G GG+G V + +    G +VA+K+ +   +  +   +  E++++  + H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 350 VALRGYCIATTQ---LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR- 405
           V+     +             ++  +  + G +  +L   N  +    L++         
Sbjct: 75  VSA--REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIRTLLSD 129

Query: 406 ---GLAYLHFGAQPAIFHRDIK 424
               L YLH   +  I HRD+K
Sbjct: 130 ISSALRYLH---ENRIIHRDLK 148

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 39/140 (27%), Positives = 56/140 (40%), Gaps = 14/140 (10%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVR 345
            + FS    IG G +G VY    + +   VA+K+        +        EV  +  +R
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR 405
           H N +  RG       L  H   +V +    GS  D L     P L      ++  G  +
Sbjct: 113 HPNTIQYRG-----CYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQ 165

Query: 406 GLAYLHFGAQPAIFHRDIKA 425
           GLAYLH      + HRD+KA
Sbjct: 166 GLAYLH---SHNMIHRDVKA 182

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 34/160 (21%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE------VALKRFK-NCSAAGDATFKHEVEV 340
           F RD +     +GRG +G V +       +      VA+K  K   + +       E+++
Sbjct: 24  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83

Query: 341 IASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL------------FASN 387
           +  +  H+N+V L G C   T+  G   +IV +  K G++  +L               +
Sbjct: 84  LIHIGHHLNVVNLLGAC---TKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPED 139

Query: 388 GPKLSWPLRQ--SIALGTARGLAYLHFGAQPAIFHRDIKA 425
             K    L      +   A+G+ +L   A     HRD+ A
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDATFKH-EVEVIASV 344
           +    +++   +IG G +G VY+  L   G  VA+K+        D  FK+ E++++  +
Sbjct: 50  RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKL 104

Query: 345 RHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHL--FASNGPKLSWPLRQSIAL 401
            H N+V LR +  ++ + +    + +V D +   +VY     ++     L     +    
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMY 163

Query: 402 GTARGLAYLH-FGAQPAIFHRDIK 424
              R LAY+H FG    I HRDIK
Sbjct: 164 QLFRSLAYIHSFG----ICHRDIK 183

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.0 bits (151), Expect = 6e-11
 Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 20/148 (13%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN 348
             +F    ++G+G +G V K     D    A+K+ ++           EV ++AS+ H  
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQY 63

Query: 349 LVALRG-YCIATTQLEGHQRI-------IVCDLMKNGSVYDHLFASNGPK---LSWPLRQ 397
           +V     +      ++    +       I  +  +NG++YD + + N  +     W L +
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIKA 425
            I       L+Y+H      I HRD+K 
Sbjct: 124 QILE----ALSYIH---SQGIIHRDLKP 144

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 62.1 bits (151), Expect = 7e-11
 Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 17/140 (12%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT-FKHEVEVIASVRHVNL 349
            +   +I+G+G   NV++G     G   A+K F N S          E EV+  + H N+
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI 69

Query: 350 VALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR--- 405
           V L     A  +    +   ++ +    GS+Y  L     P  ++ L +S  L   R   
Sbjct: 70  VKL----FAIEEETTTRHKVLIMEFCPCGSLYTVLEE---PSNAYGLPESEFLIVLRDVV 122

Query: 406 -GLAYLHFGAQPAIFHRDIK 424
            G+ +L    +  I HR+IK
Sbjct: 123 GGMNHLR---ENGIVHRNIK 139

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 61.9 bits (151), Expect = 8e-11
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 48/170 (28%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE------VALKRFK-NCSAAGDATFKHEVEV 340
           + R+NI     IG G +G V++   P          VA+K  K   SA   A F+ E  +
Sbjct: 44  YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ--- 397
           +A   + N+V L G C       G    ++ + M  G + + L + +   +         
Sbjct: 104 MAEFDNPNIVKLLGVC-----AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158

Query: 398 -------------------SIALGTARGLAYL---HFGAQPAIFHRDIKA 425
                               IA   A G+AYL    F       HRD+  
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF------VHRDLAT 202

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 62.4 bits (152), Expect = 8e-11
 Identities = 46/224 (20%), Positives = 84/224 (37%), Gaps = 47/224 (20%)

Query: 241 VWIFWRKRVVSNRRKKRERE---------EVNRIEMGLESIHESTNLVRFTFDDIKKATR 291
                 KR+   R+     E          + RI   L S  ++  L   +  ++ +  +
Sbjct: 16  AVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELPEDPK 75

Query: 292 -NFSRDNI-----IGRGGYGNVYKGLL--------PDGSEVALKRFK-NCSAAGDATFKH 336
             F RD +     +G G +G V              +   VA+K  K + +    +    
Sbjct: 76  WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVS 135

Query: 337 EVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS--------- 386
           E+E++  + +H N++ L G C   TQ +G   +IV +    G++ ++L A          
Sbjct: 136 EMEMMKMIGKHKNIINLLGAC---TQ-DGPLYVIV-EYASKGNLREYLRARRPPGMEYSY 190

Query: 387 -----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
                   ++++    S     ARG+ YL   A     HRD+ A
Sbjct: 191 DINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 231

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 62.0 bits (151), Expect = 8e-11
 Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 19/140 (13%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKR--FKNCSAAGDATFKHEVEVIASVRHVN 348
           R +S    IG GG   V++ L       A+K    +        ++++E+  +  ++  +
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 349 L--VALRGYCIATTQLEGHQRIIVCDLM--KNGSVYDHLFASNGPKLSWPLRQSIALGTA 404
              + L  Y          Q I +  +M   N  +   L       +    R+S      
Sbjct: 69  DKIIRLYDY------EITDQYIYM--VMECGNIDLNSWL-KKKK-SIDPWERKSYWKNML 118

Query: 405 RGLAYLHFGAQPAIFHRDIK 424
             +  +H   Q  I H D+K
Sbjct: 119 EAVHTIH---QHGIVHSDLK 135

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 61.8 bits (150), Expect = 1e-10
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 22/182 (12%)

Query: 249 VVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVY 308
           +      K ER+ ++  ++G +   ++++      + I    R +S    IG GG   V+
Sbjct: 17  MKETAAAKFERQHMDSPDLGTDDDDKASSSAN---ECISVKGRIYSILKQIGSGGSSKVF 73

Query: 309 KGLLPDGSEVALKR--FKNCSAAGDATFKHEVEVIASVRHVNL--VALRGYCIATTQLEG 364
           + L       A+K    +        ++++E+  +  ++  +   + L  Y I    +  
Sbjct: 74  QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI-- 131

Query: 365 HQRIIV--CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRD 422
               +V  C    N  +   L       +    R+S        +  +H   Q  I H D
Sbjct: 132 ---YMVMECG---NIDLNSWL-KKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSD 180

Query: 423 IK 424
           +K
Sbjct: 181 LK 182

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 61.8 bits (150), Expect = 1e-10
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 15/139 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT-FKHEVEVIASVRHVNL 349
            +   +I+G+G   NV++G     G   A+K F N S          E EV+  + H N+
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI 69

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR---- 405
           V L  + I         ++++ +    GS+Y  L     P  ++ L +S  L   R    
Sbjct: 70  VKL--FAIEEET-TTRHKVLIMEFCPCGSLYTVLEE---PSNAYGLPESEFLIVLRDVVG 123

Query: 406 GLAYLHFGAQPAIFHRDIK 424
           G+ +L    +  I HR+IK
Sbjct: 124 GMNHLR---ENGIVHRNIK 139

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 32/157 (20%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE---VALKRFKNCSAAGDAT-FKHEVEVIAS 343
              ++I     IG G +G V K  +         A+KR K  ++  D   F  E+EV+  
Sbjct: 22  LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCK 81

Query: 344 V-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL------------FASNGPK 390
           +  H N++ L G C       G+  + + +   +G++ D L              +N   
Sbjct: 82  LGHHPNIINLLGAC---EH-RGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136

Query: 391 LSWPLRQ--SIALGTARGLAYLHFGAQPAIFHRDIKA 425
            +   +Q    A   ARG+ YL   +Q    HRD+ A
Sbjct: 137 STLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAA 170

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 14/138 (10%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN 348
                    IG G  G V        G +VA+K              +EV ++   +H N
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 349 LVALRG-YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           +V +   Y      L G +  ++ + ++ G++ D +  S    L+     ++     + L
Sbjct: 104 VVEMYKSY------LVGEELWVLMEFLQGGALTDIV--SQVR-LNEEQIATVCEAVLQAL 154

Query: 408 AYLHFGAQPAIFHRDIKA 425
           AYLH      + HRDIK+
Sbjct: 155 AYLH---AQGVIHRDIKS 169

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 20/149 (13%), Positives = 48/149 (32%), Gaps = 17/149 (11%)

Query: 285 DIKKATRNFSRDNIIGRGGYGNVYKG------LLPDGSEVALKRFKNCSAAGDATFKHEV 338
           + +  ++     +++G G +  VY+          +  +  LK  K  +          +
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 118

Query: 339 EVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL---FASNGPKLSWPL 395
           E +        +      +          ++V +L   G++ + +     +    +   L
Sbjct: 119 ERLKPSMQHMFMKFYSAHLFQNGS-----VLVGELYSYGTLLNAINLYKNTPEKVMPQGL 173

Query: 396 RQSIALGTARGLAYLHFGAQPAIFHRDIK 424
             S A+     +  +H      I H DIK
Sbjct: 174 VISFAMRMLYMIEQVH---DCEIIHGDIK 199

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 14/138 (10%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN 348
            + ++R   IG+G  G VY  + +  G EVA+++             +E+ V+   ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 349 LVALRG-YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           +V     Y      L G +  +V + +  GS+ D +  +    +      ++     + L
Sbjct: 79  IVNYLDSY------LVGDELWVVMEYLAGGSLTDVV--TETC-MDEGQIAAVCRECLQAL 129

Query: 408 AYLHFGAQPAIFHRDIKA 425
            +LH      + HRDIK+
Sbjct: 130 EFLH---SNQVIHRDIKS 144

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 42/167 (25%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPDGSE------VALKRFK-NCSAAGDATFKHEVEV 340
           F R N+     +G G +G V K              VA+K  K N S +       E  V
Sbjct: 20  FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ--- 397
           +  V H +++ L G C   +Q +G   +IV +  K GS+   L  S      +       
Sbjct: 80  LKQVNHPHVIKLYGAC---SQ-DGPLLLIV-EYAKYGSLRGFLRESRKVGPGYLGSGGSR 134

Query: 398 -------------------SIALGTARGLAYLHFGAQPAIFHRDIKA 425
                              S A   ++G+ YL   A+  + HRD+ A
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAA 178

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 41/211 (19%), Positives = 78/211 (36%), Gaps = 44/211 (20%)

Query: 240 GVWIFWRKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNI- 298
           GV   +++       K + +     IE    + +   +  +  +++  +    F R+N+ 
Sbjct: 1   GVDYKYKQ-------KPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWE----FPRNNLQ 49

Query: 299 ----IGRGGYGNVYKGLLPDGSE------VALKRFK-NCSAAGDATFKHEVEVIASV-RH 346
               +G G +G V +       +      VA+K  K    A        E+++++ + +H
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL------------FASNGPKLSWP 394
            N+V L G C   T   G   +I  +    G + + L            FA      S  
Sbjct: 110 ENIVNLLGAC---TH-GGPVLVIT-EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR 164

Query: 395 LRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
                +   A+G+A+L   A     HRD+ A
Sbjct: 165 DLLHFSSQVAQGMAFL---ASKNCIHRDVAA 192

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 37/162 (22%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPD--------GSEVALKRFK-NCSAAGDATFKHEV 338
           F RD +     +G G +G V                  VA+K  K + +    +    E+
Sbjct: 32  FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91

Query: 339 EVIASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS----------- 386
           E++  + +H N++ L G C   TQ +G   +IV +    G++ ++L A            
Sbjct: 92  EMMKMIGKHKNIINLLGAC---TQ-DGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDI 146

Query: 387 ---NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
                 ++++    S     ARG+ YL   A     HRD+ A
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAA 185

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 57.5 bits (140), Expect = 2e-09
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 25/150 (16%)

Query: 285 DIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALK-RFKNCSAAGDAT--FKHEVEV 340
            I +   +F   N++G+G +  VY+   +  G EVA+K   K            ++EV++
Sbjct: 5   CIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWP----- 394
              ++H +++ L  Y       E    + +V ++  NG +  +L        S       
Sbjct: 65  HCQLKHPSILELYNY------FEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHF 117

Query: 395 LRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
           + Q I      G+ YLH      I HRD+ 
Sbjct: 118 MHQIIT-----GMLYLH---SHGILHRDLT 139

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 26/148 (17%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALK-RFKNCSAAGDAT--FKHEVEVIA 342
            ++ R + R   +G+GG+   ++          A K   K+             E+ +  
Sbjct: 37  PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR 96

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWP-----LR 396
           S+ H ++V   G+       E +  + +V +L +  S+ +         L+ P     LR
Sbjct: 97  SLAHQHVVGFHGF------FEDNDFVFVVLELCRRRSLLELH-KRRK-ALTEPEARYYLR 148

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIK 424
           Q +      G  YLH   +  + HRD+K
Sbjct: 149 QIVL-----GCQYLH---RNRVIHRDLK 168

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 16/132 (12%)

Query: 299 IGRGGYGNVYKG--LLPDGSEVALKRFKNCSAAGDAT----FKHEVEVIASVRHVNLVAL 352
           I  GG G +Y       +G  V LK   +   +GDA        E + +A V H ++V +
Sbjct: 88  IAHGGLGWIYLALDRNVNGRPVVLKGLVH---SGDAEAQAMAMAERQFLAEVVHPSIVQI 144

Query: 353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF 412
             +   T +       IV + +   S+           L      +  L     L+YLH 
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK---GQK-LPVAEAIAYLLEILPALSYLH- 199

Query: 413 GAQPAIFHRDIK 424
                + + D+K
Sbjct: 200 --SIGLVYNDLK 209

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 56.9 bits (138), Expect = 2e-09
 Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 14/143 (9%)

Query: 291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAAGDATFKHEVEVIASVRHV 347
            ++     IG G YG   K     DG  +  K   + + + A       EV ++  ++H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALG----T 403
           N+V      I           IV +  + G +   +  + G K    L +   L      
Sbjct: 66  NIVRYYDRIIDR---TNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQL 120

Query: 404 ARGLAYLH--FGAQPAIFHRDIK 424
              L   H        + HRD+K
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLK 143

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 35/138 (25%), Positives = 48/138 (34%), Gaps = 14/138 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK--NCSAAGDATFKHEVEVIASV-RHV 347
           +F R + +G G YG V+K     DG   A+KR           A    EV     V +H 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
             V L          EG    +  +L    S+  H   + G  L           T   L
Sbjct: 118 CCVRLEQ-----AWEEGGILYLQTELC-GPSLQQHC-EAWGASLPEAQVWGYLRDTLLAL 170

Query: 408 AYLHFGAQPAIFHRDIKA 425
           A+LH      + H D+K 
Sbjct: 171 AHLH---SQGLVHLDVKP 185

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 19/161 (11%)

Query: 274 ESTNLVRFTFDDIKKATRN-FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD 331
           ES+  ++ + +     T         IGRG YG+V K +  P G  +A+KR +  S   +
Sbjct: 4   ESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDE 61

Query: 332 ATFKH---EVEVI-ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGS---VYDHLF 384
              K    +++V+  S     +V   G              I  +LM + S    Y +++
Sbjct: 62  KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDC-----WICMELM-STSFDKFYKYVY 115

Query: 385 ASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           +     +   +   I L T + L +L       I HRDIK 
Sbjct: 116 SVLDDVIPEEILGKITLATVKALNHLK--ENLKIIHRDIKP 154

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 37/162 (22%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLPD--------GSEVALKRFK-NCSAAGDATFKHEV 338
             RD +     +G G +G V                ++VA+K  K + +    +    E+
Sbjct: 66  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125

Query: 339 EVIASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL----------FASN 387
           E++  + +H N++ L G C   TQ +G   +IV +    G++ ++L            + 
Sbjct: 126 EMMKMIGKHKNIINLLGAC---TQ-DGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNP 180

Query: 388 GPKLSWPLRQ----SIALGTARGLAYLHFGAQPAIFHRDIKA 425
                  L      S A   ARG+ YL   A     HRD+ A
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 219

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 285 DIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAAGD---ATFKHEV 338
           D+K   + + + + +G G +  VYK         VA+K  +  + S A D    T   E+
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63

Query: 339 EVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDH----LFASNGPKLSWP 394
           +++  + H N++ L       + +      +V D M      +     +   N   L+  
Sbjct: 64  KLLQELSHPNIIGLLDAFGHKSNI-----SLVFDFM------ETDLEVIIKDNSLVLTPS 112

Query: 395 LRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
             ++  L T +GL YLH   Q  I HRD+K
Sbjct: 113 HIKAYMLMTLQGLEYLH---QHWILHRDLK 139

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 57.4 bits (138), Expect = 4e-09
 Identities = 24/171 (14%), Positives = 46/171 (26%), Gaps = 37/171 (21%)

Query: 286 IKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT---FKHEVEVI 341
           + +  R   R  ++G+       +      G    +                 K EV  +
Sbjct: 73  LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRL 132

Query: 342 ASVRHV----------------NLVALRGYCIATTQLEGHQRIIV-----------CDLM 374
             +R +                +LV               + + V            +L 
Sbjct: 133 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQ 192

Query: 375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH-FGAQPAIFHRDIK 424
             G V     +++   L    R  + L   R LA LH +G    + H  ++
Sbjct: 193 TFGEVLLSHSSTHKS-LVHHARLQLTLQVIRLLASLHHYG----LVHTYLR 238

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 56.4 bits (137), Expect = 4e-09
 Identities = 29/148 (19%), Positives = 56/148 (37%), Gaps = 26/148 (17%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALK---RFKNCSAAGDATFKHEVEVIA 342
            ++ R + R   +G+GG+   ++          A K   +              E+ +  
Sbjct: 11  PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR 70

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWP-----LR 396
           S+ H ++V   G+       E +  + +V +L +  S+ +         L+ P     LR
Sbjct: 71  SLAHQHVVGFHGF------FEDNDFVFVVLELCRRRSLLELH-KRRK-ALTEPEARYYLR 122

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIK 424
           Q +      G  YLH   +  + HRD+K
Sbjct: 123 QIVL-----GCQYLH---RNRVIHRDLK 142

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 56.1 bits (136), Expect = 5e-09
 Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 16/138 (11%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKR-FKNCSAAGDAT--FKHEVEVIASVRHV 347
           +F     +G+G +GNVY          +ALK  FK            + EVE+ + +RH 
Sbjct: 10  DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 69

Query: 348 NLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
           N++ L GY           R+ ++ +    G+VY  L      K       +     A  
Sbjct: 70  NILRLYGY------FHDATRVYLILEYAPLGTVYREL-QKLS-KFDEQRTATYITELANA 121

Query: 407 LAYLHFGAQPAIFHRDIK 424
           L+Y H      + HRDIK
Sbjct: 122 LSYCH---SKRVIHRDIK 136

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 37/162 (22%)

Query: 293 FSRDNI-----IGRGGYGNVYKG----LLPDGSE--VALKRFK-NCSAAGDATFKHEVEV 340
           F R+ +     +G G +G V +     L+   +   VA+K  K +           E++V
Sbjct: 20  FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79

Query: 341 IASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ-- 397
           ++ +  H+N+V L G C   T   G   +I  +    G + + L       +        
Sbjct: 80  LSYLGNHMNIVNLLGAC---TI-GGPTLVIT-EYCCYGDLLNFLRRKRDSFICSKTSPAI 134

Query: 398 --------------SIALGTARGLAYLHFGAQPAIFHRDIKA 425
                         S +   A+G+A+L   A     HRD+ A
Sbjct: 135 MEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAA 173

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 45/208 (21%)

Query: 253 RRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATR-NFSRDNI-----IGRGGYGN 306
            +K+   E  ++++M   +           F + +   +  F R+N+     +G G +G 
Sbjct: 3   YKKQFRYE--SQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGK 60

Query: 307 VYKGLLPDGSE------VALKRFK-NCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIA 358
           V        S+      VA+K  K    ++       E++++  +  H N+V L G C  
Sbjct: 61  VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC-- 118

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHL---------------------FASNGPKLSWPLRQ 397
            T   G   +I  +    G + ++L                        +   L++    
Sbjct: 119 -TL-SGPIYLIF-EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLL 175

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIKA 425
             A   A+G+ +L      +  HRD+ A
Sbjct: 176 CFAYQVAKGMEFL---EFKSCVHRDLAA 200

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 56.1 bits (136), Expect = 8e-09
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 25/147 (17%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAAGDATFKHEVEVIASVRHVN 348
            + +   IG+G +G V+K      G +VALK    +N       T   E++++  ++H N
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVY------DH----LFASNGPKLSWPLRQS 398
           +V L    I  T+   + R         GS+Y      +H    L ++   K +    + 
Sbjct: 78  VVNLIE--ICRTKASPYNR-------CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIKA 425
           +      GL Y+H   +  I HRD+KA
Sbjct: 129 VMQMLLNGLYYIH---RNKILHRDMKA 152

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 56.3 bits (136), Expect = 8e-09
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 18/136 (13%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRF--KNCSAAGDATFKHEVEV-IASVRHVN 348
           +F   +++G G  G +    + D  +VA+KR   +  S A       EV++   S  H N
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA-----DREVQLLRESDEHPN 79

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           ++    +C   T+ +   + I  +L    ++ +                ++   T  GLA
Sbjct: 80  VIRY--FC---TEKDRQFQYIAIELC-AATLQE-YVEQKDFAHLGLEPITLLQQTTSGLA 132

Query: 409 YLHFGAQPAIFHRDIK 424
           +LH      I HRD+K
Sbjct: 133 HLH---SLNIVHRDLK 145

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 9e-09
 Identities = 63/428 (14%), Positives = 113/428 (26%), Gaps = 117/428 (27%)

Query: 33  DFNFLQQLMSQFKTPSDLPSQCQNVKKGLRLVDSQYLKRTGNFLPPLNAS--ESCWR--- 87
           ++ FL   MS  KT    PS     +  +   D  Y           N S  +   +   
Sbjct: 90  NYKFL---MSPIKTEQRQPSM--MTRMYIEQRDRLY--NDNQVFAKYNVSRLQPYLKLRQ 142

Query: 88  ------------VY-------QTLVDRVAPNFDVRSRCGFQTDWISEGCMNI--STISQF 126
                       +          +   V  ++ V+ +  F+  W++    N   + +   
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202

Query: 127 ERLIPQSTLDDVVSNCNQSLGNSAPCAACTTSLARLQAYLTGPS---VGNLSDCLAYPSI 183
           ++L+ Q   +   S  + S        +    L RL       +   V  L +      +
Sbjct: 203 QKLLYQIDPNW-TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV--LLN------V 253

Query: 184 YAAAAANQFGP-------T-DTGTANCLFSFEFAESSKK------SKKKNKGLIAGVL-- 227
             A A N F         T      + L +      S        +  + K L+   L  
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 228 -------VVCVVGLLLISG---------GVWIFWRKRVVSNRRKKREREEVNR-IEMGLE 270
                   V       +S            W  W         K    +++   IE  L 
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW---------KHVNCDKLTTIIESSLN 364

Query: 271 SIHESTNLVRFTFDD--IKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA 328
            +       R  FD   +      F     I       ++  ++     V + +    S 
Sbjct: 365 VL--EPAEYRKMFDRLSV------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL 416

Query: 329 AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC----------DLMKN-- 376
                 K   E   S+  + L  L+        L  H+ I+            DL+    
Sbjct: 417 V----EKQPKESTISIPSIYL-ELKVKLENEYAL--HRSIVDHYNIPKTFDSDDLIPPYL 469

Query: 377 -GSVYDHL 383
               Y H+
Sbjct: 470 DQYFYSHI 477

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 20/153 (13%)

Query: 282 TFDDIKKATRNFSRDNI-----IGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFK 335
            F   K+       D+      +G G  G V+K    P G  +A K          A   
Sbjct: 19  AFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRN 76

Query: 336 H---EVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLS 392
               E++V+       +V   G   +  ++      I  + M  GS+ D +    G  + 
Sbjct: 77  QIIRELQVLHECNSPYIVGFYGAFYSDGEI-----SICMEHMDGGSL-DQVLKKAGR-IP 129

Query: 393 WPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             +   +++   +GL YL    +  I HRD+K 
Sbjct: 130 EQILGKVSIAVIKGLTYLR--EKHKIMHRDVKP 160

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 37/152 (24%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALK-----------------RFKNCSAAGDATFKHEVEVI 341
           + +G +  +      D    ALK                   K    +    FK+E+++I
Sbjct: 39  LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
             +++   +   G       +  +  + I+ + M+N S+           L       I 
Sbjct: 98  TDIKNEYCLTCEGI------ITNYDEVYIIYEYMENDSILKFD--EYFFVLDKNYTCFIP 149

Query: 401 LGTAR--------GLAYLHFGAQPAIFHRDIK 424
           +   +          +Y+H   +  I HRD+K
Sbjct: 150 IQVIKCIIKSVLNSFSYIH--NEKNICHRDVK 179

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 34/146 (23%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFK--------NCSAAGDATFKHEVEVIAS 343
            + +   +G G YG VYK     G  VALKR +          +A        E+ ++  
Sbjct: 22  KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI------REISLLKE 75

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWPLRQS 398
           + H N+V+L     +   L      +V      DL K       +   N   L     + 
Sbjct: 76  LHHPNIVSLIDVIHSERCL-----TLVFEFMEKDLKK-------VLDENKTGLQDSQIKI 123

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIK 424
                 RG+A+ H   Q  I HRD+K
Sbjct: 124 YLYQLLRGVAHCH---QHRILHRDLK 146

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 34/147 (23%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK--------NCSAAGDATFKHEVEVIA 342
           NF +   IG G YG VYK      G  VALK+ +          +A        E+ ++ 
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI------REISLLK 57

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWPLRQ 397
            + H N+V L        +L      +V      DL K       + AS    +  PL +
Sbjct: 58  ELNHPNIVKLLDVIHTENKL-----YLVFEFLHQDLKK------FMDASALTGIPLPLIK 106

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIK 424
           S      +GLA+ H      + HRD+K
Sbjct: 107 SYLFQLLQGLAFCH---SHRVLHRDLK 130

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 36/147 (24%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK--------NCSAAGDATFKHEVEVIA 342
            + R   +G G YG VYK +       VA+KR +          +A        EV ++ 
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI------REVSLLK 88

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWPLRQ 397
            ++H N++ L+       +L      ++      DL K        +    P +S  + +
Sbjct: 89  ELQHRNIIELKSVIHHNHRL-----HLIFEYAENDLKK--------YMDKNPDVSMRVIK 135

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIK 424
           S       G+ + H        HRD+K
Sbjct: 136 SFLYQLINGVNFCH---SRRCLHRDLK 159

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 53.3 bits (129), Expect = 4e-08
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 35/147 (23%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK--------NCSAAGDATFKHEVEVIA 342
            + +   IG G YG V+K         VALKR +          SA        E+ ++ 
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL------REICLLK 56

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWPLRQ 397
            ++H N+V L     +  +L      +V      DL K        F S    L   + +
Sbjct: 57  ELKHKNIVRLHDVLHSDKKL-----TLVFEFCDQDLKK-------YFDSCNGDLDPEIVK 104

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIK 424
           S      +GL + H      + HRD+K
Sbjct: 105 SFLFQLLKGLGFCH---SRNVLHRDLK 128

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 53.3 bits (129), Expect = 4e-08
 Identities = 34/146 (23%), Positives = 51/146 (34%), Gaps = 34/146 (23%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFK--------NCSAAGDATFKHEVEVIAS 343
            +     IG G YG VYK     G   ALK+ +          +         E+ ++  
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI------REISILKE 56

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWPLRQS 398
           ++H N+V L        +L     ++V      DL K       L       L     +S
Sbjct: 57  LKHSNIVKLYDVIHTKKRL-----VLVFEHLDQDLKK-------LLDVCEGGLESVTAKS 104

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIK 424
             L    G+AY H      + HRD+K
Sbjct: 105 FLLQLLNGIAYCH---DRRVLHRDLK 127

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 41/150 (27%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIAS------- 343
            + +   IG G YG V+K      G  VA+K+F             +  VI         
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLE---------SEDDPVIKKIALREIR 54

Query: 344 ----VRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWP 394
               ++H NLV L        +L      +V       ++                +   
Sbjct: 55  MLKQLKHPNLVNLLEVFRRKRRL-----HLVFEYCDHTVLH-------ELDRYQRGVPEH 102

Query: 395 LRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
           L +SI   T + + + H   +    HRD+K
Sbjct: 103 LVKSITWQTLQAVNFCH---KHNCIHRDVK 129

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 34/146 (23%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFK-------NCSAAGDATFKHEVEVIAS 343
            + + + +G G Y  VYKG      + VALK  +        C+A        EV ++  
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI------REVSLLKD 56

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWPLRQS 398
           ++H N+V L         L      +V      DL +            G  ++    + 
Sbjct: 57  LKHANIVTLHDIIHTEKSL-----TLVFEYLDKDLKQ-------YLDDCGNIINMHNVKL 104

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIK 424
                 RGLAY H   +  + HRD+K
Sbjct: 105 FLFQLLRGLAYCH---RQKVLHRDLK 127

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 52.6 bits (127), Expect = 7e-08
 Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 31/147 (21%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK-------NCSAAGDATFKHEVEVIAS 343
            F +   +G G Y  VYKGL    G  VALK  K         +A        E+ ++  
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI------REISLMKE 59

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPK-LSWPLRQ 397
           ++H N+V L        +L      +V      DL K     D     N P+ L   L +
Sbjct: 60  LKHENIVRLYDVIHTENKL-----TLVFEFMDNDLKK---YMDSRTVGNTPRGLELNLVK 111

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIK 424
                  +GLA+ H   +  I HRD+K
Sbjct: 112 YFQWQLLQGLAFCH---ENKILHRDLK 135

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 16/131 (12%)

Query: 299 IGRGGYGNVYKG-LLPDGSEVALKR-FKNCSAAGDAT--FKHEVEVIASVRHVNLVALRG 354
           +G+G +GNVY      +   +ALK  FK+           + E+E+ + +RH N++ +  
Sbjct: 22  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81

Query: 355 YCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFG 413
           Y          +RI ++ +    G +Y  L   +G +       +     A  L Y H  
Sbjct: 82  Y------FHDRKRIYLMLEFAPRGELYKEL-QKHG-RFDEQRSATFMEELADALHYCH-- 131

Query: 414 AQPAIFHRDIK 424
            +  + HRDIK
Sbjct: 132 -ERKVIHRDIK 141

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 52.6 bits (125), Expect = 9e-08
 Identities = 29/186 (15%), Positives = 47/186 (25%), Gaps = 49/186 (26%)

Query: 281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALK--RFKNCSAAGDATFKHEV 338
             F      T    R   IG G +G V++ +  D + VA+K    +       +  K   
Sbjct: 11  VPFSHCL-PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFE 68

Query: 339 EVIASV---------------RHVNLVALRGYCIAT------------------------ 359
           E++  +               R    + L                               
Sbjct: 69  EILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDR 128

Query: 360 -TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
               +  Q  IV +    G   + +        S    +SI       LA     A    
Sbjct: 129 PDFFKDDQLFIVLEFEFGGIDLEQMRTK---LSSLATAKSILHQLTASLAVAE--ASLRF 183

Query: 419 FHRDIK 424
            HRD+ 
Sbjct: 184 EHRDLH 189

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 20/139 (14%)

Query: 293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRF-KNCSAAGDATFKHEVEV-IASVRHVNLV 350
              + I+G G  G V       G  VA+KR   +           E+++   S  H N++
Sbjct: 17  VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVI 72

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYD-----HLFASNGPKLSWPLRQSIALGTAR 405
               YC  TT        I  +L  N ++ D     ++   N          S+    A 
Sbjct: 73  RY--YCSETTD---RFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126

Query: 406 GLAYLHFGAQPAIFHRDIK 424
           G+A+LH      I HRD+K
Sbjct: 127 GVAHLH---SLKIIHRDLK 142

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 19/135 (14%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKH---EVEVI-ASVRHVNLVALR 353
           +GRG YG V K   +P G  +A+KR +  +       K    ++++   +V     V   
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIR--ATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72

Query: 354 GYCIATTQLEGHQRIIVCDLMKNGS---VYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
           G       +      I  +LM + S    Y  +       +   +   IA+   + L +L
Sbjct: 73  GALFREGDV-----WICMELM-DTSLDKFYKQVIDKGQT-IPEDILGKIAVSIVKALEHL 125

Query: 411 HFGAQPAIFHRDIKA 425
           H  ++ ++ HRD+K 
Sbjct: 126 H--SKLSVIHRDVKP 138

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 39/146 (26%)

Query: 299 IGRGGYGNVYKG---LLPDGSEVALKRFKN----CSAAGDATFKHEVEVIASVRHVNLVA 351
           +GRG YG+VYK       D  + ALK+ +      SA        E+ ++  ++H N+++
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------EIALLRELKHPNVIS 82

Query: 352 LRGYCIATTQ---------LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQ----S 398
           L+   ++             E        DL     +     AS   K    L +    S
Sbjct: 83  LQKVFLSHADRKVWLLFDYAE-------HDLWH---IIKFHRASKANKKPVQLPRGMVKS 132

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIK 424
           +      G+ YLH      + HRD+K
Sbjct: 133 LLYQILDGIHYLH---ANWVLHRDLK 155

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 37/147 (25%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK-NCSAAGDATFKH----EVEV---IA 342
            +     IG G YG VYK      G  VALK  +      G          EV +   + 
Sbjct: 10  RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWPLRQ 397
           +  H N+V L   C  +      +  +V      DL        +L  +  P L     +
Sbjct: 70  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRT------YLDKAPPPGLPAETIK 123

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIK 424
            +     RGL +LH      I HRD+K
Sbjct: 124 DLMRQFLRGLDFLH---ANCIVHRDLK 147

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 35/159 (22%), Positives = 54/159 (33%), Gaps = 39/159 (24%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKG--LLPDGSEVALKRFKNCSAAGDATFKHEVE----- 339
            +A + +     IG G YG V+K   L   G  VALKR +          +   E     
Sbjct: 7   CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR---------VQTGEEGMPLS 57

Query: 340 ---------VIASVRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFA 385
                     + +  H N+V L   C  +      +  +V      DL        +L  
Sbjct: 58  TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT------YLDK 111

Query: 386 SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
              P +     + +     RGL +LH      + HRD+K
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLK 147

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 50.7 bits (122), Expect = 4e-07
 Identities = 29/150 (19%), Positives = 47/150 (31%), Gaps = 41/150 (27%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIAS------- 343
            +    ++G G YG V K      G  VA+K+F             + +++         
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLE---------SDDDKMVKKIAMREIK 76

Query: 344 ----VRHVNLVALRGYCIATTQLEGHQRIIV-----CDLMKNGSVYDHLFASNGPKLSWP 394
               +RH NLV L   C    +       +V       ++                L + 
Sbjct: 77  LLKQLRHENLVNLLEVCKKKKRW-----YLVFEFVDHTILD-------DLELFPNGLDYQ 124

Query: 395 LRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
           + Q        G+ + H      I HRDIK
Sbjct: 125 VVQKYLFQIINGIGFCH---SHNIIHRDIK 151

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 50.8 bits (121), Expect = 4e-07
 Identities = 21/170 (12%), Positives = 47/170 (27%), Gaps = 35/170 (20%)

Query: 286 IKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALK---RFKNCSAAGDATFKHEVEVI 341
           + +  R   R  ++G+       +      G    +      +   +      K EV  +
Sbjct: 68  LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRL 127

Query: 342 ---ASVRHVNLVALRGYCIATT---QLEGHQRII---------------------VCDLM 374
                +++     +    I      +    +++I                       +L 
Sbjct: 128 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQ 187

Query: 375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
             G V     +++   L    R  + L   R LA LH      + H  ++
Sbjct: 188 TFGEVLLSHSSTHKS-LVHHARLQLTLQVIRLLASLH---HYGLVHTYLR 233

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 50.1 bits (120), Expect = 8e-07
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 271 SIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRF--KNCS 327
             H   +  R            ++   ++G+G +G V K        E A+K     +  
Sbjct: 2   HHHHHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK 61

Query: 328 AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFAS 386
               +T   EVE++  + H N++ L          E      IV +L   G ++D +   
Sbjct: 62  NKDTSTILREVELLKKLDHPNIMKLFEIL------EDSSSFYIVGELYTGGELFDEIIKR 115

Query: 387 NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
              + S      I      G+ Y+H   +  I HRD+K
Sbjct: 116 K--RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLK 148

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 299 IGRGGYGNVYKGLLPD---GSEVALKRFKNCSAAGDAT----FKHEVEVIASVRHVNLVA 351
           +G GG   VY     D     +VA+K                F+ EV   + + H N+V+
Sbjct: 19  LGGGGMSTVYLAE--DTILNIKVAIKAIFI-PPREKEETLKRFEREVHNSSQLSHQNIVS 75

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
                +     E     +V + ++  ++ +++  S+GP LS     +       G+ + H
Sbjct: 76  -----MIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGP-LSVDTAINFTNQILDGIKHAH 128

Query: 412 FGAQPAIFHRDIK 424
                 I HRDIK
Sbjct: 129 ---DMRIVHRDIK 138

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 29/186 (15%), Positives = 68/186 (36%), Gaps = 20/186 (10%)

Query: 246 RKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKA--TRNFSRDNIIGRGG 303
           R+    + + K  R +          + +          +IK      ++     +G G 
Sbjct: 110 RRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 169

Query: 304 YGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL 362
           +G V++      G+  A K       +   T + E++ ++ +RH  LV L        ++
Sbjct: 170 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM 229

Query: 363 EGHQRIIVCDLMKNGSVYDHLFASNG----PKLSWPLRQSIALGTARGLAYLHFGAQPAI 418
                +++ + M  G +++ +   +      +    +RQ       +GL ++H   +   
Sbjct: 230 -----VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ-----VCKGLCHMH---ENNY 276

Query: 419 FHRDIK 424
            H D+K
Sbjct: 277 VHLDLK 282

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 16/146 (10%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDAT--FKH---------EV 338
              ++    I  G YG V  G+  +G  VA+KR  N  + G                 E+
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 339 EVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQS 398
            ++    H N++ LR   +   +   H+  +V +LM   +    +       +S    Q 
Sbjct: 81  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM--RTDLAQVIHDQRIVISPQHIQY 138

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIK 424
                  GL  LH      + HRD+ 
Sbjct: 139 FMYHILLGLHVLHEA---GVVHRDLH 161

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 19/147 (12%)

Query: 286 IKKATRNFSRD----NIIGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAAGDATFKHEV 338
           I     + S        +G G YG V          E A+K  R  + S + ++    EV
Sbjct: 28  ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEV 87

Query: 339 EVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQ 397
            V+  + H N++ L  +       E  +   +V +  K G ++D +      K +     
Sbjct: 88  AVLKLLDHPNIMKLYDFF------EDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAA 139

Query: 398 SIALGTARGLAYLHFGAQPAIFHRDIK 424
            I      G+ YLH   +  I HRD+K
Sbjct: 140 VIIKQVLSGVTYLH---KHNIVHRDLK 163

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 16/132 (12%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKH---EVEVI-ASVRHVNLVALR 353
           +G G  G V+K      G  +A+K+ +   +      K    +++V+  S     +V   
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90

Query: 354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFG 413
           G  I  T +      I  +LM   +  + L       +   +   + +   + L YL   
Sbjct: 91  GTFITNTDV-----FIAMELMGTCA--EKLKKRMQGPIPERILGKMTVAIVKALYYLK-- 141

Query: 414 AQPAIFHRDIKA 425
            +  + HRD+K 
Sbjct: 142 EKHGVIHRDVKP 153

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 44/171 (25%)

Query: 290 TRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDATFKH-EVEVIASVRHV 347
           ++ +S    +G G +G V +   +  G   ALK+        D  +K+ E++++  + HV
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ-----DPRYKNRELDIMKVLDHV 60

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWP------------- 394
           N++ L  Y   T   E        D  K G   + +   +   +  P             
Sbjct: 61  NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120

Query: 395 -------LRQSIALGTA--------------RGLAYLHFGAQPAIFHRDIK 424
                  L+  I  G +              R + ++H      I HRDIK
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIK 168

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 17/104 (16%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLL------PDGSEVALKRFKNCSAAGDAT-FKHEVEV 340
           F RD +     +GRG +G V +              VA+K  K  +   +      E+++
Sbjct: 19  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 78

Query: 341 IASV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL 383
           +  +  H+N+V L G C   T+  G   +IV +  K G++  +L
Sbjct: 79  LIHIGHHLNVVNLLGAC---TKPGGPLMVIV-EFCKFGNLSTYL 118

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 35/190 (18%)

Query: 253 RRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNI---------IGRGG 303
           + K+R     + I + L           F F D+    ++     +         +G G 
Sbjct: 94  KGKRRPLNNNSEIALSLSRNK------VFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGA 147

Query: 304 YGNVYKGL-LPDGSEVALKRFK--------NCSAAGDATFKHEVEVIASVRHVNLVALRG 354
            G V          +VA++              A      + E+E++  + H  ++ ++ 
Sbjct: 148 CGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKN 207

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA 414
           +       +     IV +LM+ G ++D +  +   +L     +         + YLH   
Sbjct: 208 FF------DAEDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLH--- 256

Query: 415 QPAIFHRDIK 424
           +  I HRD+K
Sbjct: 257 ENGIIHRDLK 266

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 15/141 (10%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC-SAAGDA--TFKHEVEVIASVR 345
              +   ++IG G YG+V +     +   VA+K+         D     + E+ ++  + 
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRLN 110

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYD--HLFASNGPKLSWPLRQSIALGT 403
           H ++V +    I     +  +  +V ++       D   LF +    L+    +++    
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIAD----SDFKKLFRTPVY-LTELHIKTLLYNL 165

Query: 404 ARGLAYLHFGAQPAIFHRDIK 424
             G+ Y+H      I HRD+K
Sbjct: 166 LVGVKYVHSA---GILHRDLK 183

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 16/133 (12%)

Query: 299 IGRGGYGNVYKGLLPD---GSEVALKRFKNCSAAGDAT----FKHEVEVIASVRHVNLVA 351
           +G GG   V+     D     +VA+K  +    A D +    F+ E +  A++ H  +VA
Sbjct: 20  LGFGGMSEVHLAR--DLRDHRDVAVKVLRA-DLARDPSFYLRFRREAQNAAALNHPAIVA 76

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
           +     A T   G    IV + +   ++ D +  + GP ++      +     + L + H
Sbjct: 77  VYDTGEAETP-AGPLPYIVMEYVDGVTLRDIV-HTEGP-MTPKRAIEVIADACQALNFSH 133

Query: 412 FGAQPAIFHRDIK 424
              Q  I HRD+K
Sbjct: 134 ---QNGIIHRDVK 143

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 47.6 bits (114), Expect = 4e-06
 Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 28/137 (20%)

Query: 299 IGRGGYGNVYKGLLPD---GSEVALKRFKNCSAAGDAT----FKHEVEVIASVRHVNLVA 351
           +GRGG G+VY+    D      VALK     + + D       + E      ++  ++V 
Sbjct: 42  VGRGGMGDVYEAE--DTVRERIVALKLMSE-TLSSDPVFRTRMQREARTAGRLQEPHVVP 98

Query: 352 L--RGYCIATTQLEGHQRIIVCDLMK--NGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           +   G      +++G   +     M+  NG     +    GP L+ P   +I       L
Sbjct: 99  IHDFG------EIDGQLYVD----MRLINGVDLAAMLRRQGP-LAPPRAVAIVRQIGSAL 147

Query: 408 AYLHFGAQPAIFHRDIK 424
              H        HRD+K
Sbjct: 148 DAAH---AAGATHRDVK 161

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 19/184 (10%)

Query: 246 RKRVVSNRRKKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYG 305
              +      K +R     +++          +V      +       S+  I+G G +G
Sbjct: 45  NADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFY-TVSKTEILGGGRFG 103

Query: 306 NVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG 364
            V+K      G ++A K  K          K+E+ V+  + H NL+ L     +   +  
Sbjct: 104 QVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDI-- 161

Query: 365 HQRIIVCDLMKNGSVYDHLFASNGP----KLSWPLRQSIALGTARGLAYLHFGAQPAIFH 420
              ++V + +  G ++D +   +           ++Q        G+ ++H   Q  I H
Sbjct: 162 ---VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-----ICEGIRHMH---QMYILH 210

Query: 421 RDIK 424
            D+K
Sbjct: 211 LDLK 214

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 27/184 (14%)

Query: 255 KKREREEVNRIEMGLESIHESTNLVRFTFDDIKKATRNFSRDNI---------IGRGGYG 305
                    R +     I++        +           + ++         +G G +G
Sbjct: 6   HHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFG 65

Query: 306 NVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG 364
            V++ +    G     K           T K+E+ ++  + H  L+ L        ++  
Sbjct: 66  VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEM-- 123

Query: 365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR----GLAYLHFGAQPAIFH 420
              +++ + +  G ++D + A +       + ++  +   R    GL ++H   + +I H
Sbjct: 124 ---VLILEFLSGGELFDRIAAEDY-----KMSEAEVINYMRQACEGLKHMH---EHSIVH 172

Query: 421 RDIK 424
            DIK
Sbjct: 173 LDIK 176

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 21/144 (14%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR 345
           K+    +     +GRG +G V++ +          K F           K E+ ++   R
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAK-FVKVKGTDQVLVKKEISILNIAR 59

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLS-----WPLRQSIA 400
           H N++ L     +  +L     +++ + +    +++ +  S   +L+       + Q   
Sbjct: 60  HRNILHLHESFESMEEL-----VMIFEFISGLDIFERINTS-AFELNEREIVSYVHQ--- 110

Query: 401 LGTARGLAYLHFGAQPAIFHRDIK 424
                 L +LH      I H DI+
Sbjct: 111 --VCEALQFLH---SHNIGHFDIR 129

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 271 SIHESTNLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRF--KNCS 327
             H   +  R            ++   ++G+G +G V K        E A+K     +  
Sbjct: 2   HHHHHHSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK 61

Query: 328 AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFAS 386
               +T   EVE++  + H N++ L          E      IV +L   G ++D +   
Sbjct: 62  NKDTSTILREVELLKKLDHPNIMKLFEIL------EDSSSFYIVGELYTGGELFDEIIKR 115

Query: 387 NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
              + S      I      G+ Y+H   +  I HRD+K
Sbjct: 116 K--RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLK 148

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 19/132 (14%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYC 356
           ++G G +  V+       G   ALK  K   A  D++ ++E+ V+  ++H N+V L    
Sbjct: 16  VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75

Query: 357 IATTQLEGHQRI-IVCDLMKNGSVYDHLFASNG---PKLSWPLRQSIALGTARGLAYLHF 412
                 E      +V  L+  G ++D +           S  ++Q         + YLH 
Sbjct: 76  ------ESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ-----VLSAVKYLH- 123

Query: 413 GAQPAIFHRDIK 424
             +  I HRD+K
Sbjct: 124 --ENGIVHRDLK 133

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK-NCSAAGDATFKHEVEVIASVRHVN 348
            +F     +GRGG+G V++     D    A+KR +             EV+ +A + H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSW 393
           +V      + T   +  + +    L    + +     S     S 
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSV 110

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 23/137 (16%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALK-----RFKNCSAAGD-ATFKHEVEVIASVRHVNLV 350
            +G G +  V K      G E A K     + +           + EV ++  V H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG---PKLSWPLRQSIALGTARGL 407
            L       T +     +++ +L+  G ++D L         + +  ++Q        G+
Sbjct: 79  TLHDVYENRTDV-----VLILELVSGGELFDFLAQKESLSEEEATSFIKQ-----ILDGV 128

Query: 408 AYLHFGAQPAIFHRDIK 424
            YLH      I H D+K
Sbjct: 129 NYLH---TKKIAHFDLK 142

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 18/136 (13%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALK-----RFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
           +IG+G +  V + +    G + A+K     +F +         K E  +   ++H ++V 
Sbjct: 31  VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90

Query: 352 LRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLA 408
           L               + +V + M    +   +      G   S  +           L 
Sbjct: 91  LLETY------SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144

Query: 409 YLHFGAQPAIFHRDIK 424
           Y H      I HRD+K
Sbjct: 145 YCH---DNNIIHRDVK 157

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 23/136 (16%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALK-----RFKNCSAAGD-ATFKHEVEVIASVRHVNLVA 351
           +G G +  V K      G E A K     + +           + EV ++  V H N++ 
Sbjct: 20  LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG---PKLSWPLRQSIALGTARGLA 408
           L       T +     +++ +L+  G ++D L         + +  ++Q        G+ 
Sbjct: 80  LHDVYENRTDV-----VLILELVSGGELFDFLAQKESLSEEEATSFIKQ-----ILDGVN 129

Query: 409 YLHFGAQPAIFHRDIK 424
           YLH      I H D+K
Sbjct: 130 YLH---TKKIAHFDLK 142

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 20/148 (13%)

Query: 286 IKKATRNFSRD----NIIGRGGYGNVYKGL-LPDGSEVALK---RFKNCSAAGDATFKHE 337
           ++ +T  FS       ++G+G +G V        G E A+K   + +        +   E
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76

Query: 338 VEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLR 396
           V+++  + H N++ L  +       E      +V ++   G ++D + +    + S    
Sbjct: 77  VQLLKQLDHPNIMKLYEFF------EDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDA 128

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIK 424
             I      G+ Y+H   +  I HRD+K
Sbjct: 129 ARIIRQVLSGITYMH---KNKIVHRDLK 153

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 34/201 (16%), Positives = 52/201 (25%), Gaps = 58/201 (28%)

Query: 273 HESTNLVRFTFDDIKKATRNFSRD----NIIGRGGYGNVYKGL-LPDGSEVALK-----R 322
           H   +  R        +     +       IG+G YG V   +     +  A+K     +
Sbjct: 4   HHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNK 63

Query: 323 FKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYD 381
            +  +       K EV ++  + H N+  L          E  Q I +V +L   G + D
Sbjct: 64  IRQINPKDVERIKTEVRLMKKLHHPNIARLYEV------YEDEQYICLVMELCHGGHLLD 117

Query: 382 HLFASNGPKLSWPLRQSIALGTAR------------------------------------ 405
            L               +                                          
Sbjct: 118 KLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177

Query: 406 --GLAYLHFGAQPAIFHRDIK 424
              L YLH      I HRDIK
Sbjct: 178 FSALHYLH---NQGICHRDIK 195

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 28/165 (16%)

Query: 271 SIHESTNLVRFTFD-DIKKATRNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRF-KNCS 327
             H S+      F   I      F     +G G +G+V+       G E  +K   K+ S
Sbjct: 4   HHHHSSGRENLYFQGTIDD---LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS 60

Query: 328 AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFAS 386
                  + E+EV+ S+ H N++ +          E +  + IV +  + G + + + ++
Sbjct: 61  QVPMEQIEAEIEVLKSLDHPNIIKIFEVF------EDYHNMYIVMETCEGGELLERIVSA 114

Query: 387 NGPKLSWP-------LRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
                +         ++Q +       LAY H      + H+D+K
Sbjct: 115 QARGKALSEGYVAELMKQMMN-----ALAYFH---SQHVVHKDLK 151

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 23/136 (16%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALK-----RFKNCSAAGD-ATFKHEVEVIASVRHVNLVA 351
           +G G +  V K      G E A K     R  +          + EV ++  +RH N++ 
Sbjct: 13  LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG---PKLSWPLRQSIALGTARGLA 408
           L       T +     +++ +L+  G ++D L         + +  L+Q        G+ 
Sbjct: 73  LHDIFENKTDV-----VLILELVSGGELFDFLAEKESLTEDEATQFLKQ-----ILDGVH 122

Query: 409 YLHFGAQPAIFHRDIK 424
           YLH      I H D+K
Sbjct: 123 YLH---SKRIAHFDLK 135

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 30/142 (21%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALK--------RFKNCSAAGDATFKHEVEVIASVRHVNL 349
           +G G +G V+  +      EV +K                       E+ +++ V H N+
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGS-VYDHLFASNGPKLSWPL-----RQSIALGT 403
           + +    I   Q       +V +   +G  ++  +     P+L  PL     RQ ++   
Sbjct: 92  IKV--LDIFENQ---GFFQLVMEKHGSGLDLFAFI--DRHPRLDEPLASYIFRQLVS--- 141

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
              + YL       I HRDIK 
Sbjct: 142 --AVGYLR---LKDIIHRDIKD 158

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 43.4 bits (103), Expect = 7e-05
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 16/146 (10%)

Query: 281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVE 339
            T  DI +    ++ +N IGRG +G V   +        A K+           FK E+E
Sbjct: 2   STKGDINQ---YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 58

Query: 340 VIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQS 398
           ++ S+ H N++ L          E +  I +V +L   G +++ +               
Sbjct: 59  IMKSLDHPNIIRLYETF------EDNTDIYLVMELCTGGELFERVVHKR--VFRESDAAR 110

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIK 424
           I       +AY H   +  + HRD+K
Sbjct: 111 IMKDVLSAVAYCH---KLNVAHRDLK 133

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 43.3 bits (103), Expect = 7e-05
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 25/136 (18%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRF--KNCSAAGDATFKHEVEVIASVRHVNLVALRG 354
            +G+G +  V + +    G E A K    K  SA      + E  +   ++H N+V L  
Sbjct: 13  ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72

Query: 355 YCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLS-----WPLRQSIALGTARGLA 408
                   +      +V DL+  G +++ + A      S       ++Q         +A
Sbjct: 73  SI------QEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQ-----ILESIA 119

Query: 409 YLHFGAQPAIFHRDIK 424
           Y H      I HR++K
Sbjct: 120 YCH---SNGIVHRNLK 132

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 20/143 (13%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR----FKNCSAAGDA--TFKHEVEVIA 342
            + +     +G G YG+V   +    G +VA+K+    F++      A   ++ E+ ++ 
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI---FAKRAYR-ELLLLK 78

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
            ++H N++ L       + L       +V   M+     D L    G K S    Q +  
Sbjct: 79  HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ----TD-LQKIMGLKFSEEKIQYLVY 133

Query: 402 GTARGLAYLHFGAQPAIFHRDIK 424
              +GL Y+H      + HRD+K
Sbjct: 134 QMLKGLKYIHSA---GVVHRDLK 153

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 32/152 (21%), Positives = 57/152 (37%), Gaps = 29/152 (19%)

Query: 286 IKKATRNFSRD----NIIGRGGYGNVYKGL-LPDGSEVALKRF--KNCSAAGDATFKHEV 338
           +  A+  FS +      +G+G +  V + +    G E A K    K  SA      + E 
Sbjct: 20  MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79

Query: 339 EVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLS----- 392
            +   ++H N+V L          +      +V DL+  G +++ + A      S     
Sbjct: 80  RICRKLQHPNIVRLHDSI------QEESFHYLVFDLVTGGELFEDIVARE--FYSEADAS 131

Query: 393 WPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
             ++Q         +AY H      I HR++K
Sbjct: 132 HCIQQ-----ILESIAYCH---SNGIVHRNLK 155

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 38/162 (23%)

Query: 286 IKKATRNFSRD----NIIGRGGYGNVYKGL-LPDGSEVALK-------------RFKNCS 327
           ++K              +G G YG V         SE A+K                   
Sbjct: 27  VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86

Query: 328 AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFAS 386
                   +E+ ++ S+ H N++ L          E  +   +V +  + G +++ +   
Sbjct: 87  EKFHEEIYNEISLLKSLDHPNIIKLFDVF------EDKKYFYLVTEFYEGGELFEQIINR 140

Query: 387 NGPKLSWPLRQSIALGTAR----GLAYLHFGAQPAIFHRDIK 424
           +         +  A    +    G+ YLH   +  I HRDIK
Sbjct: 141 H------KFDECDAANIMKQILSGICYLH---KHNIVHRDIK 173

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 21/134 (15%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRF--KNCSAAGDATFKHEVEVIASVRHVNLVALRG 354
            +G+G +  V + + +  G E A      K  SA      + E  +   ++H N+V L  
Sbjct: 18  ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77

Query: 355 YCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNG---PKLSWPLRQSIALGTARGLAYL 410
                          ++ DL+  G +++ + A         S  ++Q         + + 
Sbjct: 78  SI------SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ-----ILEAVLHC 126

Query: 411 HFGAQPAIFHRDIK 424
           H   Q  + HR++K
Sbjct: 127 H---QMGVVHRNLK 137

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 30/142 (21%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKR------FKNCSAAGDATFKHEVEVIASVRHV--NL 349
           +G GG+G+VY G+ + D   VA+K                     EV ++  V      +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKN-GSVYDHLFASNGPKLSWPL-----RQSIALGT 403
           + L  +            +++ +  +    ++D +    G  L   L      Q +    
Sbjct: 111 IRLLDW-FERPD----SFVLILERPEPVQDLFDFI-TERG-ALQEELARSFFWQVLE--- 160

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
              + + H      + HRDIK 
Sbjct: 161 --AVRHCH---NCGVLHRDIKD 177

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 22/139 (15%), Positives = 52/139 (37%), Gaps = 17/139 (12%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV--------- 347
            +G G +  V+    + + + VA+K  +      +A  + E++++  V            
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAA-EDEIKLLQRVNDADNTKEDSMG 84

Query: 348 --NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR 405
             +++ L  +         H  ++V +++   ++   +       +     + I+     
Sbjct: 85  ANHILKLLDHFNHKGPNGVHV-VMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLL 142

Query: 406 GLAYLHFGAQPAIFHRDIK 424
           GL Y+H      I H DIK
Sbjct: 143 GLDYMHRRCG--IIHTDIK 159

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 21/144 (14%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR----FKNCSAAGDA--TFKHEVEVIA 342
             N+   ++IGRG YG VY          VA+K+    F++     D     + E+ ++ 
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI---DCKRILR-EITILN 80

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYD--HLFASNGPKLSWPLRQSIA 400
            ++   ++ L    I    L+  +  IV ++       D   LF +    L+    ++I 
Sbjct: 81  RLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD----SDLKKLFKTPIF-LTEEHIKTIL 135

Query: 401 LGTARGLAYLHFGAQPAIFHRDIK 424
                G  ++H      I HRD+K
Sbjct: 136 YNLLLGENFIHES---GIIHRDLK 156

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 11/138 (7%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA--TFKHEVEVIASVRH 346
              ++  + IG G YG V       +   VA+K+            T + E++++   RH
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRH 84

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            N++ +     A T  +     IV DLM   +    L  +    LS            RG
Sbjct: 85  ENIIGINDIIRAPTIEQMKDVYIVQDLM--ETDLYKLLKTQ--HLSNDHICYFLYQILRG 140

Query: 407 LAYLHFGAQPAIFHRDIK 424
           L Y+H      + HRD+K
Sbjct: 141 LKYIHSA---NVLHRDLK 155

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 20/134 (14%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHV-NLVALRG 354
           +GRG +  V + +    G E A K  K         A   HE+ V+   +    ++ L  
Sbjct: 37  LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR----GLAYL 410
               T+++     I++ +    G ++          +S    ++  +   +    G+ YL
Sbjct: 97  VYENTSEI-----ILILEYAAGGEIFSLCLPELAEMVS----ENDVIRLIKQILEGVYYL 147

Query: 411 HFGAQPAIFHRDIK 424
           H   Q  I H D+K
Sbjct: 148 H---QNNIVHLDLK 158

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 23/136 (16%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALK-----RFKNCSAAGD-ATFKHEVEVIASVRHVNLVA 351
           +G G +  V K      G + A K     R K+          + EV ++  ++H N++ 
Sbjct: 19  LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG---PKLSWPLRQSIALGTARGLA 408
           L       T +     I++ +L+  G ++D L         + +  L+Q        G+ 
Sbjct: 79  LHEVYENKTDV-----ILILELVAGGELFDFLAEKESLTEEEATEFLKQ-----ILNGVY 128

Query: 409 YLHFGAQPAIFHRDIK 424
           YLH      I H D+K
Sbjct: 129 YLH---SLQIAHFDLK 141

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 28/140 (20%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRF--KNCSAAGDAT------FKHEVEVIASVRHVN 348
            +G G  G V          +VA+K    +  +             + E+E++  + H  
Sbjct: 17  TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR--- 405
           ++ ++ +       +     IV +LM+ G ++D +  +   +L     ++          
Sbjct: 77  IIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNK--RLK----EATCKLYFYQML 124

Query: 406 -GLAYLHFGAQPAIFHRDIK 424
             + YLH   +  I HRD+K
Sbjct: 125 LAVQYLH---ENGIIHRDLK 141

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 19/134 (14%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKR----FKNCSAAGDA--TFKHEVEVIASVRHVNLVA 351
           +G G YG V   +    G++VA+K+    F++      A   ++ E+ ++  +RH N++ 
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL---FAKRAYR-ELRLLKHMRHENVIG 88

Query: 352 LRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
           L         L+      +V   M  G+    L      KL     Q +     +GL Y+
Sbjct: 89  LLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI 144

Query: 411 HFGAQPAIFHRDIK 424
           H      I HRD+K
Sbjct: 145 HAAG---IIHRDLK 155

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 32/144 (22%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKR------FKNCSAAGDATFKHEVEVIASVR----HV 347
           +G+GG+G V+ G  L D  +VA+K             +   T   EV ++  V     H 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGS-VYDHLFASNGPKLSWPL-----RQSIAL 401
            ++ L  +   T +      ++V +       ++D++    G  L          Q +A 
Sbjct: 99  GVIRLLDW-FETQE----GFMLVLERPLPAQDLFDYI-TEKG-PLGEGPSRCFFGQVVA- 150

Query: 402 GTARGLAYLHFGAQPAIFHRDIKA 425
                + + H      + HRDIK 
Sbjct: 151 ----AIQHCH---SRGVVHRDIKD 167

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 19/143 (13%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR----FKNCSAAGDA--TFKHEVEVIA 342
              +   + +G G YG+V        G  VA+K+    F++      A  T++ E+ ++ 
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII---HAKRTYR-ELRLLK 83

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
            ++H N++ L         LE    + +V  LM  G+  +++      KL+    Q +  
Sbjct: 84  HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQ--KLTDDHVQFLIY 139

Query: 402 GTARGLAYLHFGAQPAIFHRDIK 424
              RGL Y+H      I HRD+K
Sbjct: 140 QILRGLKYIHSAD---IIHRDLK 159

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 32/139 (23%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGY 355
           ++G G +  V   + L    E A+K  +       +    EVE++   + H N++ L  +
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79

Query: 356 CIATTQLEGHQRI-IVCDLMKNGSVYDHLF---------ASNGPKLSWPLRQSIALGTAR 405
                  E   R  +V + M+ GS+  H+          AS        + Q +    A 
Sbjct: 80  F------EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDV----AS 122

Query: 406 GLAYLHFGAQPAIFHRDIK 424
            L +LH      I HRD+K
Sbjct: 123 ALDFLH---NKGIAHRDLK 138

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 24/136 (17%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALK---RFKNCSAAGDATFKHEVEVIASVRHVNLVALRG 354
           +G G +G V  G     G +VA+K   R K  S       K E++ +   RH +++ L  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL-- 76

Query: 355 YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLS-----WPLRQSIALGTARGLAY 409
           Y + +T        +V + +  G ++D++   +G ++         +Q ++      + Y
Sbjct: 77  YQVISTP---TDFFMVMEYVSGGELFDYI-CKHG-RVEEMEARRLFQQILS-----AVDY 126

Query: 410 LHFGAQPAIFHRDIKA 425
            H   +  + HRD+K 
Sbjct: 127 CH---RHMVVHRDLKP 139

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC-SAAGDA--TFKHEVEVIASVR 345
            + +     IG G  G V           VA+K+          A   ++ E+ ++  V 
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVN 119

Query: 346 HVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTA 404
           H N+++L         LE  Q + +V +LM      + L      +L       +     
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMD----AN-LCQVIQMELDHERMSYLLYQML 174

Query: 405 RGLAYLHFGAQPAIFHRDIK 424
            G+ +LH      I HRD+K
Sbjct: 175 CGIKHLHSAG---IIHRDLK 191

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 40.5 bits (95), Expect = 8e-04
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 28/138 (20%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALK---RFKNCSAAGDATFKHEVEVIASVRHVNLVALRG 354
           +G G +G V  G     G +VA+K   R K  S       + E++ +   RH +++ L  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL-- 81

Query: 355 Y-CIAT-TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLS-----WPLRQSIALGTARGL 407
           Y  I+T + +      +V + +  G ++D++   NG +L         +Q ++     G+
Sbjct: 82  YQVISTPSDI-----FMVMEYVSGGELFDYI-CKNG-RLDEKESRRLFQQILS-----GV 129

Query: 408 AYLHFGAQPAIFHRDIKA 425
            Y H   +  + HRD+K 
Sbjct: 130 DYCH---RHMVVHRDLKP 144

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 27/150 (18%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKR--FKNCSAAGDATFKH---EVEVIAS 343
              +     +G GG G V+  +       VA+K+    +  +      KH   E+++I  
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSV-----KHALREIKIIRR 64

Query: 344 VRHVNLVAL--------RGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLSWP 394
           + H N+V +                 L     + IV + M   +   ++       L   
Sbjct: 65  LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM--ETDLANVLEQG--PLLEE 120

Query: 395 LRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
             +       RGL Y+H      + HRD+K
Sbjct: 121 HARLFMYQLLRGLKYIHSA---NVLHRDLK 147

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.0 bits (94), Expect = 9e-04
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 25/136 (18%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALK--RFKNCSAAGDATFKHEVEVIASVRHVNLVALRGY 355
           IG+G +  V     +  G EVA+K       +         EV ++  + H N+V L  +
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL--F 80

Query: 356 -CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWP-----LRQSIALGTARGLAY 409
             I T +       ++ +    G V+D+L  ++G ++         RQ ++      + Y
Sbjct: 81  EVIETEK----TLYLIMEYASGGEVFDYL-VAHG-RMKEKEARSKFRQIVS-----AVQY 129

Query: 410 LHFGAQPAIFHRDIKA 425
            H   Q  I HRD+KA
Sbjct: 130 CH---QKRIVHRDLKA 142

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	425
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.91
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.91
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.91
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.91
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.9
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.89
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.89
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.88
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.88
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.87
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.87
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.87
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.87
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.86
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.86
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.85
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.85
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.85
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.85
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.85
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.85
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.85
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.85
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.84
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.84
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.84
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.84
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.84
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.84
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.84
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.84
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.84
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.84
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.84
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.84
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.84
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.84
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.84
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.83
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.83
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.83
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.83
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.83
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.83
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.83
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.83
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.83
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.83
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.83
3uqc_A	286	Probable conserved transmembrane protein; structur	99.83
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.83
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.83
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.83
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.83
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.83
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.83
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.83
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.83
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.83
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.83
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.83
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.82
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.82
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.82
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.82
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.82
3niz_A	311	Rhodanese family protein; structural genomics, str	99.82
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.82
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.82
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.82
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.82
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.82
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.82
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.82
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.82
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.82
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.82
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.82
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.82
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.82
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.82
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.82
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.82
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.82
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.82
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.82
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.81
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.81
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.81
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.81
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.81
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.81
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.81
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.81
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.81
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.81
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.81
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.81
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.81
3bhy_A	283	Death-associated protein kinase 3; death associate	99.81
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.81
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.81
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.81
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.81
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.81
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.81
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.81
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.81
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.81
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.81
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.81
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.81
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.81
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.81
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.81
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.81
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.81
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.81
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.8
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.8
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.8
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.8
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.8
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.8
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.8
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.8
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.8
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.8
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.8
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.8
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.8
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.8
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.8
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.8
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.8
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.8
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.8
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.8
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.8
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.8
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.8
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.8
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.8
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.8
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.8
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.8
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.8
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.8
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.8
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.8
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.8
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.8
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.8
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.8
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.8
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.8
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.8
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.79
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.79
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.79
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.79
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.79
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.79
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.79
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.79
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.79
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.79
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.79
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.79
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.79
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.79
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.79
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.79
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.79
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.79
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.79
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.79
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.79
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.79
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.79
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.79
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.78
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.78
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.78
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.78
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.78
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.78
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.78
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.78
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.78
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.78
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.78
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.78
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.78
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.78
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.78
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.78
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.78
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.78
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.78
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.77
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.77
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.77
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.77
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.77
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.77
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.77
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.76
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.76
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.76
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.76
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.76
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.76
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.76
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.76
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.76
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.76
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.75
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.75
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.75
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.75
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.75
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.74
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.74
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.74
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.74
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.73
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.73
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.73
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.73
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.73
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.73
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.72
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.72
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.71
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.71
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.68
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.66
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.66
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.61
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.49
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.35
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.75
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.46
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.23
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.83
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.35
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.28
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.19
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	95.74
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	95.68
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	95.46
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.42
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	94.89
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	94.87
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	94.55
3ats_A	357	Putative uncharacterized protein; hypothetical pro	94.54
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	94.43
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	92.93
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	92.81
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	89.52
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.28
2k9y_A	41	Ephrin type-A receptor 2; receptor tyrosine kinase	82.3

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=6.1e-29  Score=242.85  Aligned_cols=127  Identities=29%  Similarity=0.487  Sum_probs=110.9

Q ss_pred             cCcccceeecccCcccEEeeecC------CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||+||+|++.      +|+.||||+++..+....++|.+|+++|++++|||||+++|+|.     ++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~   87 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG   87 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----eC
Confidence            45777899999999999999853      47889999998766666789999999999999999999999997     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFAS-----------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~-----------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..+||||||++|+|.++|+..           ....++|.+++.|+.|||+||+|||   +++||||||||
T Consensus        88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp  156 (299)
T 4asz_A           88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLAT  156 (299)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCH
Confidence            6789999999999999999753           2356999999999999999999999   89999999997

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.95  E-value=1.3e-28  Score=243.65  Aligned_cols=127  Identities=26%  Similarity=0.447  Sum_probs=112.4

Q ss_pred             cCcccceeecccCcccEEeeecC------CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||+||+|++.      +++.||||+++..+....++|.+|+++|++++|||||+++|+|.     ++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~  115 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-----EG  115 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----EC
Confidence            45667789999999999999853      47899999998766666788999999999999999999999997     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASN-------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~-------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..+||||||++|+|.++|+...             ..+++|.+++.|+.|||+||+|||   +++||||||||
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp  186 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLAT  186 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccH
Confidence            67899999999999999997532             246999999999999999999999   89999999997

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=4e-28  Score=238.05  Aligned_cols=125  Identities=24%  Similarity=0.393  Sum_probs=106.7

Q ss_pred             cccceeecccCcccEEeeec------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          293 FSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      +...+.||+|+||+||+|.+      .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.     +++
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~~~  102 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-----KDQ  102 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSS
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-----ECC
Confidence            44457899999999999986      256799999997543 334578999999999999999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+||||||++|+|.++|+...              ...++|.++++|+.|||+||+|||   +.+||||||||
T Consensus       103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~  173 (308)
T 4gt4_A          103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLAT  173 (308)
T ss_dssp             SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccc
Confidence            6799999999999999997532              235999999999999999999999   89999999997

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=2.9e-27  Score=231.65  Aligned_cols=123  Identities=34%  Similarity=0.533  Sum_probs=107.2

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +++...+.||+|+||+||+|++.+  .||||.++..  +....++|.+|+++|++++|||||+++|+|.      .+..+
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~~~~~  107 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDNLA  107 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSCE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------CCeEE
Confidence            456778899999999999999753  6999998743  2344578999999999999999999999985      23579


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||||++|+|.++|+.. ...++|.+++.|+.|||+||+|||   +.+||||||||
T Consensus       108 iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp  160 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKS  160 (307)
T ss_dssp             EEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCS
T ss_pred             EEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCH
Confidence            999999999999999754 346999999999999999999999   88999999997

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.93  E-value=4.1e-26  Score=227.04  Aligned_cols=127  Identities=24%  Similarity=0.353  Sum_probs=107.7

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||+||+++ ..+|+.||||+++...  ....+.|.+|+++|++++|||||++++++.     +++..
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~-----~~~~~   98 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE-----ENGSL   98 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEE
Confidence            578899999999999999998 4579999999997532  333568999999999999999999999997     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||||+++|+|.++|.......+++.+...|+.||+.||+|||   +.+||||||||
T Consensus        99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp  153 (350)
T 4b9d_A           99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKS  153 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCG
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCH
Confidence            99999999999999998766667899999999999999999999   89999999997

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.93  E-value=3e-26  Score=224.14  Aligned_cols=127  Identities=31%  Similarity=0.457  Sum_probs=104.1

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHH--HHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFK--HEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~--~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +++...+.||+|+||+||+|++ +|+.||||+++..   ..+++.  .|+..+.+++|||||+++|+|..... .....+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~-~~~~~~   77 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLW   77 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC-CceEEE
Confidence            3466778999999999999998 6899999999642   233344  45556678899999999999985432 224679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFG-----AQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~-----~~~~IiHRDLKp  425 (425)
                      ||||||++|+|.++|+..   .++|..+.+|+.|+|+||+|||..     ..++||||||||
T Consensus        78 lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp  136 (303)
T 3hmm_A           78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS  136 (303)
T ss_dssp             EEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCG
T ss_pred             EEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCc
Confidence            999999999999999753   599999999999999999999943     245999999997

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.93  E-value=1e-25  Score=223.84  Aligned_cols=124  Identities=22%  Similarity=0.344  Sum_probs=110.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +.|...+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++.     +++..||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~~i  148 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWV  148 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEEE
Confidence            4577788999999999999984 579999999997544445567899999999999999999999997     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||||++|+|.+++..   ..+++.....|+.||++||+|||   +.+||||||||
T Consensus       149 vmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp  198 (346)
T 4fih_A          149 VMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKS  198 (346)
T ss_dssp             EECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCH
Confidence            9999999999999965   35999999999999999999999   89999999997

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.92  E-value=2.4e-25  Score=216.35  Aligned_cols=126  Identities=29%  Similarity=0.420  Sum_probs=106.4

Q ss_pred             ccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          294 SRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ...+.||+|+||.||+|.. .++..||||++...  .....+.|.+|++++++++|||||++++++..... .++..+||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~-~~~~~~lv  107 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK-GKKCIVLV  107 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET-TEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC-CCcEEEEE
Confidence            4457799999999999984 56899999999643  23345679999999999999999999999864321 23467999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                      ||||++|+|.+++...  ..+++.....|+.||++||+|||   +.+  ||||||||
T Consensus       108 mEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp  159 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKC  159 (290)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCG
T ss_pred             EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccCh
Confidence            9999999999999653  46999999999999999999999   655  99999997

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.92  E-value=9e-26  Score=225.27  Aligned_cols=137  Identities=20%  Similarity=0.346  Sum_probs=113.7

Q ss_pred             cHHHHHHHhcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCC-Cccccee
Q 048791          282 TFDDIKKATRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCSA-AGDATFKHEVEVIASVRH-VNLVALR  353 (425)
Q Consensus       282 ~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H-~NIV~l~  353 (425)
                      +.++.+...++|...+.||+|+||+||+|...      .++.||||+++.... ...++|.+|+++|.+++| ||||+++
T Consensus        55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            33444445678889999999999999999742      346899999976443 335689999999999975 8999999


Q ss_pred             eEEeeccccCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 048791          354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIF  419 (425)
Q Consensus       354 g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~Ii  419 (425)
                      |+|..    .++..+||||||++|+|.++|+...              +..++|..++.|+.|||+||+|||   +.+||
T Consensus       135 g~~~~----~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~ii  207 (353)
T 4ase_A          135 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCI  207 (353)
T ss_dssp             EEECC----TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             EEEEe----cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCee
Confidence            99973    3456799999999999999997532              345899999999999999999999   89999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      ||||||
T Consensus       208 HRDLK~  213 (353)
T 4ase_A          208 HRDLAA  213 (353)
T ss_dssp             CSCCSG
T ss_pred             cCccCc
Confidence            999997

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=4e-25  Score=225.01  Aligned_cols=124  Identities=22%  Similarity=0.348  Sum_probs=111.8

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +.|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+++|++++|||||++++++.     .++..||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~~i  225 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWV  225 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEE-----ECCEEEE
Confidence            4588889999999999999984 579999999998655555678999999999999999999999997     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||||++|+|.+++...   .+++.+...|+.||++||+|||   +.+||||||||
T Consensus       226 VmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp  275 (423)
T 4fie_A          226 VMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKS  275 (423)
T ss_dssp             EEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCST
T ss_pred             EEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCH
Confidence            99999999999999643   5999999999999999999999   89999999997

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.91  E-value=5.2e-25  Score=215.75  Aligned_cols=125  Identities=21%  Similarity=0.273  Sum_probs=110.6

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||+||+++ ..+|+.||||.++..   .....+.+.+|+++|++++|||||++++++.     +.+.
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-----DDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence            468889999999999999998 467999999999642   1233467899999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .||||||+++|+|.+++...  +.+++.....|+.||+.||+|||   +.+||||||||
T Consensus       107 ~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKP  160 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKP  160 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCH
Confidence            89999999999999999653  46999999999999999999999   89999999997

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.91  E-value=7.4e-25  Score=216.94  Aligned_cols=121  Identities=25%  Similarity=0.274  Sum_probs=106.9

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .+.|...+.||+|+||.||+++. .+|+.||||+++...     .+.+|+.++++++|||||++++++.     +++..|
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~-----~~~~~~  126 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVR-----EGPWVN  126 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEE
Confidence            35677788999999999999984 579999999997532     2357999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||||++|+|.++|...  ..+++.....|+.||++||+|||   +.+||||||||
T Consensus       127 ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp  178 (336)
T 4g3f_A          127 IFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKA  178 (336)
T ss_dssp             EEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCG
T ss_pred             EEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCH
Confidence            999999999999999653  46999999999999999999999   89999999997

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.91  E-value=9.6e-25  Score=213.10  Aligned_cols=132  Identities=21%  Similarity=0.327  Sum_probs=107.5

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeecccc------
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQL------  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~------  362 (425)
                      ++|...+.||+|+||+||+++ ..+|+.||||+++.... ...+.|.+|+++|++++|||||++++++...+..      
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            458888999999999999998 45799999999975333 3346799999999999999999999998754321      


Q ss_pred             -CCceEEEEEecCCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 -EGHQRIIVCDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 -~~~~~~LV~Ey~~~GsL~~~L~~~~~-~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       .....|+||||+++|+|.+++..... ...++...+.|+.||++||+|||   +.+||||||||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp  146 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKP  146 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcH
Confidence             12346899999999999999976432 34678888999999999999999   89999999998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.91  E-value=4e-24  Score=206.16  Aligned_cols=124  Identities=21%  Similarity=0.347  Sum_probs=105.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||+||++.. .+|+.||||+++...   ....+.|.+|++++++++|||||++++++.     +.+.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-----~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCE
Confidence            6799999999999999999984 579999999997432   223467999999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+ +|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        88 ~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP  140 (275)
T 3hyh_A           88 IIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKP  140 (275)
T ss_dssp             EEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCT
T ss_pred             EEEEEeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCh
Confidence            89999999 68999999653  46999999999999999999999   89999999998

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.90  E-value=1.2e-24  Score=212.60  Aligned_cols=125  Identities=20%  Similarity=0.269  Sum_probs=103.6

Q ss_pred             cCcccceeecccCcccEEeeec----CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||+||+++.    .+++.||||.++...  ......+.+|+++|++++|||||++++++.     +.
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ-----TE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-----ET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----EC
Confidence            4688899999999999999973    257899999997532  223357889999999999999999999997     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..||||||+++|+|.+++...  ..+++.....|+.||+.||+|||   +.+||||||||
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp  154 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKP  154 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCG
T ss_pred             CEEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCH
Confidence            6789999999999999999653  46999999999999999999999   89999999997

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.89  E-value=3.7e-23  Score=209.64  Aligned_cols=129  Identities=24%  Similarity=0.383  Sum_probs=110.1

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~~~  366 (425)
                      ++|...+.||+|+||+||+|. ..+|+.||||+++....  ...+.+.+|+++|++++|||||++++++..... .+.+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            468888999999999999998 45799999999975332  234678899999999999999999999865432 23467


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .|||||||+ |+|.+++..  ...+++.....|+.||++||+|||   +.+||||||||
T Consensus       134 ~~ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP  186 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKP  186 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             EEEEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCc
Confidence            899999996 789999954  357999999999999999999999   89999999997

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.89  E-value=7.1e-23  Score=200.17  Aligned_cols=144  Identities=50%  Similarity=0.863  Sum_probs=124.7

Q ss_pred             CcccccHHHHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeE
Q 048791          277 NLVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGY  355 (425)
Q Consensus       277 ~~~~f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~  355 (425)
                      ....|++.++..++++|...+.||+|+||.||++...+|+.||||+++.... .....|.+|++++.+++|+||++++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            4567899999999999999999999999999999988899999999975432 233479999999999999999999999


Q ss_pred             EeeccccCCceEEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.     ..+..++||||+++|+|.+++....  ...++|..+..|+.|+++||+|||..+.++|+||||||
T Consensus        96 ~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp  162 (326)
T 3uim_A           96 CM-----TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA  162 (326)
T ss_dssp             EC-----CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSG
T ss_pred             Ee-----cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCch
Confidence            97     4556799999999999999997643  34599999999999999999999954455999999997

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.88  E-value=3.5e-23  Score=202.29  Aligned_cols=138  Identities=43%  Similarity=0.769  Sum_probs=121.9

Q ss_pred             cccHHHHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeec
Q 048791          280 RFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIAT  359 (425)
Q Consensus       280 ~f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~  359 (425)
                      .+++.++..++++|...+.||+|+||.||+|...+|+.||||++........+.|.+|++++++++|+||+++++++.  
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--  105 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD--  105 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC--
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--
Confidence            455667777889999999999999999999998889999999998766666778999999999999999999999986  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         +++..++||||+++|+|.+++....  ...++|..+..|+.|+++||+|||   +.+|+||||||
T Consensus       106 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp  167 (321)
T 2qkw_B          106 ---ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKS  167 (321)
T ss_dssp             ---CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCS
T ss_pred             ---CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCH
Confidence               4567899999999999999996543  235999999999999999999999   88999999997

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.88  E-value=1.4e-22  Score=214.61  Aligned_cols=127  Identities=19%  Similarity=0.345  Sum_probs=113.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++........+.+.+|+++|++++|||||++++++.     +.+..+
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-----~~~~~~  230 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE-----DDNEMV  230 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE-----CSSEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEE
Confidence            36788999999999999999984 579999999998655555678899999999999999999999987     567889


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||||++|+|.++|... ...+++.....|+.||++||+|||   +.+||||||||
T Consensus       231 iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp  283 (573)
T 3uto_A          231 MIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKP  283 (573)
T ss_dssp             EEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCh
Confidence            999999999999999643 346999999999999999999999   89999999997

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.87  E-value=5e-22  Score=194.79  Aligned_cols=136  Identities=24%  Similarity=0.331  Sum_probs=119.5

Q ss_pred             ccccHHHHHHHhcC----------cccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCC
Q 048791          279 VRFTFDDIKKATRN----------FSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV  347 (425)
Q Consensus       279 ~~f~~~ei~~at~~----------f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~  347 (425)
                      ..+++++++.+++.          |...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++|+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            35788888888875          666789999999999999864 7999999999866656667899999999999999


Q ss_pred             cccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       348 NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++++++.     .++..++||||+++|+|.+++..   ..++|..+..++.|+++||+|||   +.+|+||||||
T Consensus       103 niv~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp  169 (321)
T 2c30_A          103 NVVEMYKSYL-----VGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKS  169 (321)
T ss_dssp             TBCCEEEEEE-----ETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             CcceEEEEEE-----ECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            9999999997     45678999999999999999843   35999999999999999999999   88999999997

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.87  E-value=6.2e-22  Score=191.62  Aligned_cols=140  Identities=38%  Similarity=0.679  Sum_probs=123.0

Q ss_pred             CcccccHHHHHHHhcCcccc------eeecccCcccEEeeecCCCCeeEEeeecCCC----ccchHHHHHHHHHHhhCCC
Q 048791          277 NLVRFTFDDIKKATRNFSRD------NIIGRGGYGNVYKGLLPDGSEVALKRFKNCS----AAGDATFKHEVEVIASVRH  346 (425)
Q Consensus       277 ~~~~f~~~ei~~at~~f~~~------~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l~H  346 (425)
                      ....|+++++.+++++|...      +.||+|+||.||+|.. +++.||||++....    ....+.|.+|++++++++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            45678999999999999988      8999999999999997 68899999986432    2334679999999999999


Q ss_pred             CcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS-NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       347 ~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~-~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||+++++++.     ..+..++||||+++|+|.+++... ....++|..+..|+.|+++||+|||   +.+|+||||||
T Consensus        90 ~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp  161 (307)
T 2nru_A           90 ENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKS  161 (307)
T ss_dssp             TTBCCEEEEEC-----SSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             CCeEEEEEEEe-----cCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCH
Confidence            99999999987     456789999999999999999642 2356999999999999999999999   88999999997

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.87  E-value=2.3e-22  Score=201.31  Aligned_cols=123  Identities=22%  Similarity=0.327  Sum_probs=107.6

Q ss_pred             HHhcCcccceeecccCcccEEeeec----CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      +..+.|...+.||+|+||+||+|+.    .+++.||||++....  ....+.+|+++|.++ +|||||++++++.     
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~-----   90 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFR-----   90 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEE-----
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEE-----
Confidence            3457799999999999999999973    357889999986533  345688999999998 5999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.+..++||||+++|+|.+++.     .+++.....++.|+++||+|||   +.+||||||||
T Consensus        91 ~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKP  145 (361)
T 4f9c_A           91 KNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKP  145 (361)
T ss_dssp             ETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCH
Confidence            4567899999999999999982     4899999999999999999999   89999999998

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.87  E-value=1.1e-21  Score=190.61  Aligned_cols=126  Identities=24%  Similarity=0.460  Sum_probs=113.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++.. .+|+.||+|++........+.|.+|++++.+++|+||+++++++.     +++..++
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~l   84 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY-----KDKRLNF   84 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEe-----cCCeeEE
Confidence            4677889999999999999985 568999999997666666788999999999999999999999997     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++... ...++|..+..|+.|+++||+|||   +.+|+||||||
T Consensus        85 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp  136 (310)
T 3s95_A           85 ITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNS  136 (310)
T ss_dssp             EEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCST
T ss_pred             EEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCc
Confidence            99999999999999763 346999999999999999999999   88999999997

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.86  E-value=1.2e-21  Score=196.36  Aligned_cols=126  Identities=28%  Similarity=0.439  Sum_probs=109.8

Q ss_pred             cCcccceeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|+..    ++..||||+++... ....++|.+|++++++++|+||++++|++.     +++
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~  119 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-----KSK  119 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SSS
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCC
Confidence            46888899999999999999853    57789999997543 334568999999999999999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++... ...++|..+..|+.||++||+|||   +.+|+||||||
T Consensus       120 ~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  175 (373)
T 2qol_A          120 PVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAA  175 (373)
T ss_dssp             SCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             ceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCc
Confidence            789999999999999999753 346999999999999999999999   88999999997

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.86  E-value=1.1e-21  Score=201.10  Aligned_cols=136  Identities=21%  Similarity=0.254  Sum_probs=116.9

Q ss_pred             ccHHHHHHHhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEE
Q 048791          281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYC  356 (425)
Q Consensus       281 f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~  356 (425)
                      +.+.++...+++|...++||+|+||+||+++.. +++.||||+++...   ......+.+|+.++.+++|+|||++++++
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            345666677889999999999999999999964 58899999996421   12234589999999999999999999999


Q ss_pred             eeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       357 ~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .     +++..++|||||++|+|.+++... ...+++.....++.||+.||+|||   +.+||||||||
T Consensus       144 ~-----~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp  203 (437)
T 4aw2_A          144 Q-----DDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKP  203 (437)
T ss_dssp             E-----CSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             e-----eCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCH
Confidence            7     566789999999999999999653 346999999999999999999999   89999999997

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.85  E-value=2.1e-21  Score=201.97  Aligned_cols=127  Identities=27%  Similarity=0.446  Sum_probs=113.2

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||+|... ++..||||.++... ...++|.+|+++|++++|+|||+++|+|.     +.+..+
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~-----~~~~~~  292 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFY  292 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSCE
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEe-----cCCcEE
Confidence            456888899999999999999965 48899999997543 34578999999999999999999999997     456679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||||++|+|.+++.......+++..++.|+.||++||+|||   +.+||||||||
T Consensus       293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp  346 (495)
T 1opk_A          293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAA  346 (495)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence            9999999999999998766667999999999999999999999   88999999997

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.85  E-value=4.6e-21  Score=182.18  Aligned_cols=125  Identities=27%  Similarity=0.459  Sum_probs=111.2

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||++...+++.||||++.... ...++|.+|++++.+++|+||+++++++.     +.+..++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv   83 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPICLV   83 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSEEEE
T ss_pred             hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCceEEE
Confidence            4577889999999999999998788999999997533 33568999999999999999999999987     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp  134 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA  134 (269)
T ss_dssp             EECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEeCCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcch
Confidence            9999999999999653 346999999999999999999999   89999999997

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.85  E-value=3.9e-21  Score=187.22  Aligned_cols=133  Identities=21%  Similarity=0.306  Sum_probs=109.8

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc------
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ------  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~------  361 (425)
                      .++|...+.||+|+||.||+++.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.....      
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            456888899999999999999964 79999999997433 3345789999999999999999999999864321      


Q ss_pred             ----------------------------------------------cCCceEEEEEecCCCCCHHHHHhcCC-CCCCCHH
Q 048791          362 ----------------------------------------------LEGHQRIIVCDLMKNGSVYDHLFASN-GPKLSWP  394 (425)
Q Consensus       362 ----------------------------------------------~~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~L~~~  394 (425)
                                                                    ......++||||+++|+|.+++.... ....+|.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                          01224799999999999999997642 2346888


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          395 LRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       395 ~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..|+.||++||+|||   +.+|+||||||
T Consensus       165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  192 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKP  192 (332)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             HHHHHHHHHHHHHHHHH---hCCeeecCCCc
Confidence            89999999999999999   88999999997

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.85  E-value=6e-21  Score=184.96  Aligned_cols=125  Identities=22%  Similarity=0.404  Sum_probs=111.4

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||++........+.+.+|+.++++++||||+++++++.     .++..+
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~   93 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW   93 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEE-----ECCEEE
Confidence            3568888999999999999998 4679999999997544445678899999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...   .+++.....++.|+++||+|||   +.+|+||||||
T Consensus        94 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp  144 (297)
T 3fxz_A           94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS  144 (297)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCH
Confidence            999999999999999653   5899999999999999999999   88999999997

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.85  E-value=1.5e-21  Score=200.72  Aligned_cols=128  Identities=26%  Similarity=0.436  Sum_probs=112.8

Q ss_pred             HHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ...++|...+.||+|+||.||+|...++..||||+++... ...++|.+|+++|++++|+|||++++++.      .+..
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~  257 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPI  257 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCcc
Confidence            3456788889999999999999999888999999998643 34678999999999999999999999984      3457


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++.......+++..+..|+.||++||+|||   +.+||||||||
T Consensus       258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp  312 (454)
T 1qcf_A          258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRA  312 (454)
T ss_dssp             EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSG
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCH
Confidence            99999999999999997543346899999999999999999999   88999999997

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.85  E-value=4.1e-21  Score=197.29  Aligned_cols=126  Identities=30%  Similarity=0.432  Sum_probs=111.4

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||+|... |+.||||.++...  ..+.|.+|+++|++++|+|||++++++..    ..+..++
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~~i  264 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYI  264 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TTSCEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc----CCCceEE
Confidence            456778899999999999999974 7899999998643  45689999999999999999999999874    3346899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++.......+++..++.++.||++||+|||   +.+||||||||
T Consensus       265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp  317 (450)
T 1k9a_A          265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAA  317 (450)
T ss_dssp             EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCH
Confidence            999999999999998755556899999999999999999999   88999999997

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.85  E-value=2.3e-21  Score=183.46  Aligned_cols=128  Identities=20%  Similarity=0.359  Sum_probs=111.1

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+|+. +|+.||||+++...  ....+.|.+|+.++.+++|+||+++++++...   +++..+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~~   85 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPHPT   85 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSSCE
T ss_pred             HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCCeE
Confidence            4577889999999999999997 48899999997533  33346799999999999999999999998742   235679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                      +||||+++|+|.+++.......+++..+..|+.|+++||+|||   +.+  |+||||||
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp  141 (271)
T 3kmu_A           86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNS  141 (271)
T ss_dssp             EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSG
T ss_pred             eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCcc
Confidence            9999999999999998765556999999999999999999999   667  99999997

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.85  E-value=4e-21  Score=188.68  Aligned_cols=126  Identities=27%  Similarity=0.426  Sum_probs=108.8

Q ss_pred             cCcccceeecccCcccEEeeecC----CCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|...    .+..||||+++.. .....+.|.+|++++.+++|+||+++++++.     +++
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~  123 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RGR  123 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----GGG
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eCC
Confidence            35677799999999999999863    3446999999754 3344568999999999999999999999986     455


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++... ...+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp  179 (325)
T 3kul_A          124 LAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAA  179 (325)
T ss_dssp             CCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCc
Confidence            679999999999999999653 346999999999999999999999   88999999997

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.85  E-value=2.2e-21  Score=186.87  Aligned_cols=128  Identities=22%  Similarity=0.411  Sum_probs=111.4

Q ss_pred             cCcccceeecccCcccEEeeec-----CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||++.+     .+|+.||||+++.......+.|.+|++++.+++|+||+++++++...   +..
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~   86 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR   86 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HHT
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CCC
Confidence            4577889999999999999973     36889999999876655567899999999999999999999998642   223


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp  142 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLAT  142 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             ceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCH
Confidence            5799999999999999997643 35999999999999999999999   89999999997

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.85  E-value=4.9e-21  Score=204.17  Aligned_cols=125  Identities=24%  Similarity=0.292  Sum_probs=105.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHH---HHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFK---HEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~---~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...++||+|+||+||+++. .+|+.||||+++...   ......+.   .|+.+++.++|||||++++++.     +
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~-----~  263 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-----T  263 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-----C
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE-----E
Confidence            5688899999999999999984 579999999996421   12222333   3467777889999999999987     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..||||||+++|+|.++|...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus       264 ~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKP  320 (689)
T 3v5w_A          264 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKP  320 (689)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSG
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCch
Confidence            66789999999999999999653  46999999999999999999999   99999999997

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.84  E-value=4.3e-21  Score=192.16  Aligned_cols=128  Identities=22%  Similarity=0.390  Sum_probs=109.7

Q ss_pred             hcCcccceeecccCcccEEeeec--------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeec
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL--------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIAT  359 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l--------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~  359 (425)
                      .++|...+.||+|+||.||++..        .++..||||+++.... ...+++.+|++++.++ +||||+++++++.  
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~--  157 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT--  157 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence            35688889999999999999973        2456799999975433 3346899999999999 8999999999997  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         +.+..++||||+++|+|.+++....              ...++|..++.|+.||++||+|||   +.+||||||||
T Consensus       158 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp  231 (370)
T 2psq_A          158 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA  231 (370)
T ss_dssp             ---SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             ---cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccch
Confidence               4566899999999999999997643              235899999999999999999999   88999999997

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.84  E-value=2.3e-21  Score=191.71  Aligned_cols=137  Identities=20%  Similarity=0.363  Sum_probs=114.4

Q ss_pred             cHHHHHHHhcCcccceeecccCcccEEeee------cCCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCccccee
Q 048791          282 TFDDIKKATRNFSRDNIIGRGGYGNVYKGL------LPDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALR  353 (425)
Q Consensus       282 ~~~ei~~at~~f~~~~~IG~G~fG~Vykg~------l~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~  353 (425)
                      ...+.....++|...+.||+|+||.||++.      ..+++.||||+++.... ...+.|.+|++++.++ +|||||+++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            344445557789999999999999999996      34568999999975433 3346799999999999 799999999


Q ss_pred             eEEeeccccCCceEEEEEecCCCCCHHHHHhcCCC---------------------------------------------
Q 048791          354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG---------------------------------------------  388 (425)
Q Consensus       354 g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~---------------------------------------------  388 (425)
                      +++..    .+...++||||+++|+|.+++.....                                             
T Consensus        93 ~~~~~----~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (359)
T 3vhe_A           93 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV  168 (359)
T ss_dssp             EEECS----TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred             eeeec----CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence            99874    34457999999999999999976431                                             


Q ss_pred             -------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          389 -------------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       389 -------------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                                         ..+++..+..|+.|+++||+|||   +.+||||||||
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp  221 (359)
T 3vhe_A          169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA  221 (359)
T ss_dssp             ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence                               12899999999999999999999   88999999997

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.84  E-value=2.2e-21  Score=194.51  Aligned_cols=127  Identities=28%  Similarity=0.479  Sum_probs=110.8

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||+|... +++.||||.++... ....++|.+|++++++++|||||+++|++.     .++..
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~  187 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPI  187 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-----SSSSC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----cCCCc
Confidence            456788899999999999999964 78999999997543 233457899999999999999999999997     45567


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++... ...+++..+..++.||++||+|||   +.+||||||||
T Consensus       188 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp  241 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAA  241 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCH
Confidence            9999999999999999753 235899999999999999999999   88999999997

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.84  E-value=7.3e-21  Score=180.50  Aligned_cols=126  Identities=25%  Similarity=0.389  Sum_probs=111.6

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||++...++..||||+++... ...+++.+|++++.+++|+||+++++++.     +.+..++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   80 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCS-----KEYPIYI   80 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCceEE
Confidence            35678889999999999999998888899999997643 23467999999999999999999999986     5567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++... ...+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        81 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp  132 (268)
T 3sxs_A           81 VTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAA  132 (268)
T ss_dssp             EEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSG
T ss_pred             EEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCc
Confidence            99999999999999653 235999999999999999999999   88999999997

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.84  E-value=1e-20  Score=189.93  Aligned_cols=128  Identities=23%  Similarity=0.287  Sum_probs=112.8

Q ss_pred             hcCcccceeeccc--CcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRG--GYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G--~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|  +||.||++.. .+|+.||||+++...  ....+.+.+|++++++++|+|||++++++.     .+
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~   98 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----AD   98 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-----EC
Confidence            4568888999999  9999999995 479999999997432  333467888999999999999999999997     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++.......+++..+..|+.||++||+|||   +.+||||||||
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp  156 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKA  156 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            67899999999999999998765567999999999999999999999   88999999997

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.84  E-value=7.4e-21  Score=186.75  Aligned_cols=129  Identities=29%  Similarity=0.457  Sum_probs=111.7

Q ss_pred             HhcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      ..++|...+.||+|+||.||++...      +++.||||.++... ....+.|.+|++++.+++|+||+++++++.    
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----  120 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA----  120 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC----
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc----
Confidence            4567888999999999999999853      45889999997543 333568999999999999999999999997    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASN----------------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIF  419 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~----------------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~Ii  419 (425)
                       +++..++||||+++|+|.+++....                      ...+++..++.|+.||++||+|||   +.+|+
T Consensus       121 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~iv  196 (343)
T 1luf_A          121 -VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV  196 (343)
T ss_dssp             -SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             -cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence             4567899999999999999997632                      156999999999999999999999   88999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      ||||||
T Consensus       197 H~Dlkp  202 (343)
T 1luf_A          197 HRDLAT  202 (343)
T ss_dssp             CSCCSG
T ss_pred             cCCCCc
Confidence            999997

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.84  E-value=3.3e-21  Score=198.07  Aligned_cols=127  Identities=28%  Similarity=0.458  Sum_probs=111.6

Q ss_pred             HhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ..++|...+.||+|+||.||+|...++..||||+++... ...++|.+|+++|++++|+||+++++++.      .+..+
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~------~~~~~  254 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY  254 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCE
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEc------CCceE
Confidence            345688889999999999999998888889999997543 33568999999999999999999999985      24579


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.......+++..+..|+.||++||+|||   +.+||||||||
T Consensus       255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp  308 (452)
T 1fmk_A          255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA  308 (452)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCh
Confidence            9999999999999996543456999999999999999999999   89999999997

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.84  E-value=8.7e-21  Score=187.01  Aligned_cols=126  Identities=25%  Similarity=0.332  Sum_probs=111.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|++++++++||||+++++++.     ..+.
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~~   88 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-----TEKT   88 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCE
Confidence            46788899999999999999985 68999999999643  2333467889999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp  142 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKA  142 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCH
Confidence            89999999999999999653  35999999999999999999999   88999999997

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.84  E-value=7.3e-21  Score=186.32  Aligned_cols=127  Identities=31%  Similarity=0.384  Sum_probs=108.2

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||+|+.. ++.||||+++... .....+..|+.++.+++|+|||++++++..... .....++
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~~~l   99 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS-VDVDLWL   99 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC-CCceEEE
Confidence            456888899999999999999874 7899999996532 223456779999999999999999999975432 2445799


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP----------AIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~----------~IiHRDLKp  425 (425)
                      ||||+++|+|.+++...   .++|..+..|+.|+++||+|||   +.          +|+||||||
T Consensus       100 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp  159 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKS  159 (322)
T ss_dssp             EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSG
T ss_pred             EEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCCh
Confidence            99999999999999653   4999999999999999999999   66          999999997

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.84  E-value=8.3e-21  Score=181.54  Aligned_cols=126  Identities=24%  Similarity=0.397  Sum_probs=109.1

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||++...++..||||+++... ...++|.+|++++.+++|+||+++++++.     +++..++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   96 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT-----KQRPIFI   96 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEe-----cCCCeEE
Confidence            45688889999999999999998888899999997643 33568999999999999999999999986     5567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++... ...+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        97 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp  148 (283)
T 3gen_A           97 ITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA  148 (283)
T ss_dssp             EECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSG
T ss_pred             EEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCcc
Confidence            99999999999999653 345999999999999999999999   88999999997

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.84  E-value=7.8e-21  Score=190.62  Aligned_cols=123  Identities=24%  Similarity=0.361  Sum_probs=104.3

Q ss_pred             ccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          294 SRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      ...+.||+|+||.||++.. .+|+.||||+++.......++|.+|++++.+++|+|||++++++.     +.+..++|||
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~lv~E  166 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE-----SKNDIVLVME  166 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSEEEEEEE
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEEEEEe
Confidence            3457899999999999984 579999999998755556678999999999999999999999997     5667899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |+++|+|.+++... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       167 ~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  215 (373)
T 2x4f_A          167 YVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKP  215 (373)
T ss_dssp             CCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             CCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCH
Confidence            99999999998653 345999999999999999999999   88999999997

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.84  E-value=5.8e-21  Score=190.89  Aligned_cols=127  Identities=28%  Similarity=0.425  Sum_probs=109.8

Q ss_pred             cCcccceeecccCcccEEeeecC------CCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||+|...      +++.||||+++.. .......|.+|+.++.+++|+|||++++++.     .
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~  145 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-----Q  145 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-----c
Confidence            56788899999999999999842      4678999999753 3344567999999999999999999999987     4


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASN-----GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~-----~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....++||||+++|+|.+++....     ...++|..++.|+.||++||+|||   +.+||||||||
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp  209 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAA  209 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCh
Confidence            556799999999999999997632     245999999999999999999999   88999999997

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.84  E-value=1.7e-20  Score=187.52  Aligned_cols=126  Identities=24%  Similarity=0.327  Sum_probs=110.7

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCcc------chHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAA------GDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~------~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.++.....      ..+.+.+|+.++.+++||||+++++++.     
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----   85 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE-----   85 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE-----
Confidence            45688889999999999999985 46999999999753321      2467999999999999999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +....++||||+++|+|.+++..  ...+++.....++.||+.||+|||   +.+|+||||||
T Consensus        86 ~~~~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp  143 (361)
T 2yab_A           86 NRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKP  143 (361)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            56678999999999999999954  346999999999999999999999   88999999997

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.84  E-value=1.2e-20  Score=184.17  Aligned_cols=129  Identities=25%  Similarity=0.341  Sum_probs=110.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||+++... ....+.+.+|++++.+++|+||+++++++...   .....+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~~   85 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRHKV   85 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCCEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC---CCceEE
Confidence            4577889999999999999985 458999999997533 23356788999999999999999999998742   234679


Q ss_pred             EEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp  140 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKP  140 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCH
Confidence            9999999999999997632 234999999999999999999999   88999999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.84  E-value=8.6e-21  Score=180.70  Aligned_cols=128  Identities=27%  Similarity=0.365  Sum_probs=111.6

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCC--CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC--SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++... +++.||||+++..  ......++.+|+..+.++ +||||+++++++.     +.+
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~-----~~~   84 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA-----EDD   84 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE-----ETT
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCC
Confidence            456888899999999999999854 7999999999753  233456889999999999 8999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++....  ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp  143 (289)
T 1x8b_A           85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKP  143 (289)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCH
Confidence            7899999999999999996532  256999999999999999999999   88999999997

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.83  E-value=1.3e-20  Score=187.51  Aligned_cols=126  Identities=16%  Similarity=0.243  Sum_probs=109.0

Q ss_pred             HhcCcccceeecccCcccEEeee------cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC---CCcccceeeEEeec
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL------LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR---HVNLVALRGYCIAT  359 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~------l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~---H~NIV~l~g~~~~~  359 (425)
                      ..++|...+.||+|+||.||+|.      ..+++.||||+++..   ...++..|++++.+++   |+||+++++++.  
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~--  137 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL--  137 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE--
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeee--
Confidence            45678889999999999999994      456899999999753   3457888999999887   999999999997  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFAS---NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~---~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         ..+..++||||+++|+|.+++...   ....++|..+..|+.||++||+|||   +.+||||||||
T Consensus       138 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp  200 (365)
T 3e7e_A          138 ---FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKP  200 (365)
T ss_dssp             ---CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSG
T ss_pred             ---cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCH
Confidence               566789999999999999999641   3456999999999999999999999   89999999997

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.83  E-value=2e-20  Score=183.72  Aligned_cols=125  Identities=22%  Similarity=0.334  Sum_probs=109.8

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc------cchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA------AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||.++....      ...+.+.+|++++.+++||||+++++++.     .
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~   85 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-----N   85 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----e
Confidence            4578889999999999999985 4689999999975322      13467999999999999999999999987     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ....++||||+++|+|.+++..  ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp  142 (326)
T 2y0a_A           86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP  142 (326)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             CCEEEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCH
Confidence            6678999999999999999954  356999999999999999999999   89999999997

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.83  E-value=6e-21  Score=182.88  Aligned_cols=126  Identities=21%  Similarity=0.389  Sum_probs=109.9

Q ss_pred             cCcccceeecccCcccEEeeecC-CC-------CeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DG-------SEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g-------~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||++... ++       ..||+|.++.......+.|.+|++++.+++|+||+++++++.     
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----   82 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV-----   82 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC-----
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----
Confidence            46778899999999999999853 23       469999997655555678999999999999999999999997     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++..++||||+++|+|.+++... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        83 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp  141 (289)
T 4fvq_A           83 CGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCA  141 (289)
T ss_dssp             CTTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             eCCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCc
Confidence            455679999999999999999764 234999999999999999999999   88999999997

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.83  E-value=2.3e-20  Score=183.16  Aligned_cols=126  Identities=18%  Similarity=0.258  Sum_probs=110.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++.. .+|+.||+|.++.. ......+.+|++++.+++||||+++++++.     +.+..+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~   77 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFE-----SMEELV   77 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEE-----ETTEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEe-----cCCEEE
Confidence            46788889999999999999984 46889999998753 334467899999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++... ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus        78 lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp  130 (321)
T 1tki_A           78 MIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRP  130 (321)
T ss_dssp             EEECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCH
Confidence            999999999999999543 346999999999999999999999   88999999997

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.83  E-value=4.9e-21  Score=201.09  Aligned_cols=126  Identities=29%  Similarity=0.461  Sum_probs=111.2

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||+|...++..||||+++... ...++|.+|+++|++++|+|||++++++.      .+..+|
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~------~~~~~l  338 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYI  338 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCEE
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEe------eccceE
Confidence            45678889999999999999998888889999998643 33568999999999999999999999985      245799


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||||++|+|.+++.......+++..++.|+.||++||+|||   +.+||||||||
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp  391 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA  391 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCH
Confidence            999999999999996543346999999999999999999999   89999999997

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.83  E-value=2.4e-20  Score=179.52  Aligned_cols=128  Identities=30%  Similarity=0.502  Sum_probs=107.5

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhh--CCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIAS--VRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~--l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||+|.. +|+.||||++..   .....+..|.+++..  ++|+||+++++++..... .....
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~-~~~~~   81 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRH-SSTQL   81 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET-TEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccC-CCcee
Confidence            45688889999999999999987 689999999864   234567778877776  789999999999875322 34567


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA-----QPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~-----~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++..   ..++|..+..|+.||++||+|||...     +.+|+||||||
T Consensus        82 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp  141 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKS  141 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCG
T ss_pred             EEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCCh
Confidence            999999999999999943   46999999999999999999999432     78999999997

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.83  E-value=5.7e-21  Score=194.39  Aligned_cols=136  Identities=17%  Similarity=0.255  Sum_probs=116.8

Q ss_pred             ccHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEE
Q 048791          281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYC  356 (425)
Q Consensus       281 f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~  356 (425)
                      +.++++....++|...+.||+|+||.||+++. .+|+.||||+++...   ....+.+.+|.+++.+++|+||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            44566666778999999999999999999985 579999999996421   12234688999999999999999999998


Q ss_pred             eeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          357 IATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       357 ~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .     +.+..++||||+++|+|.+++... ...+++.....++.||+.||+|||   +.+||||||||
T Consensus       131 ~-----~~~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp  190 (412)
T 2vd5_A          131 Q-----DENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKP  190 (412)
T ss_dssp             E-----CSSEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             e-----eCCEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCH
Confidence            7     566789999999999999999653 236999999999999999999999   89999999997

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.83  E-value=5.1e-21  Score=183.29  Aligned_cols=128  Identities=27%  Similarity=0.447  Sum_probs=113.6

Q ss_pred             HhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ..++|...+.||+|+||.||++... ++..||||.++.. ....+.|.+|++++++++|+||+++++++.     ..+..
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~   84 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPF   84 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCCE
Confidence            3567888899999999999999854 5889999999753 334568999999999999999999999986     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++.......+++..+..|+.++++||+|||   +.+|+||||||
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp  139 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA  139 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSG
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCc
Confidence            99999999999999998766677999999999999999999999   88999999997

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.83  E-value=1.1e-20  Score=185.56  Aligned_cols=126  Identities=24%  Similarity=0.339  Sum_probs=108.2

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++.. .+++.||||++.... ....+.+.+|+.++.+++|+||+++++++.     +++..
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~   80 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ   80 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCCeE
Confidence            36788899999999999999985 478999999996433 223467899999999999999999999987     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++..  ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        81 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp  133 (323)
T 3tki_A           81 YLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKP  133 (323)
T ss_dssp             EEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEcCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccch
Confidence            999999999999999853  346999999999999999999999   89999999997

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.83  E-value=1.9e-20  Score=181.95  Aligned_cols=132  Identities=23%  Similarity=0.362  Sum_probs=112.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++........+.+.+|++++.+++|+||+++++++..... .....+
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~~  106 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERG-AKHEAW  106 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEET-TEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccC-CCceeE
Confidence            45788899999999999999984 6799999999976555556789999999999999999999999874322 345779


Q ss_pred             EEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++..  .....+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp  162 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKP  162 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            99999999999999965  23456999999999999999999999   88999999997

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.83  E-value=2.5e-20  Score=188.05  Aligned_cols=127  Identities=20%  Similarity=0.315  Sum_probs=112.7

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++.. .+|+.||+|.+..........+.+|++++.+++|+||+++++++.     +....+
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~~~  124 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-----DKYEMV  124 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-----CSSEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE-----eCCEEE
Confidence            45788899999999999999985 478999999997655545568999999999999999999999997     567889


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++... ...+++.....++.||++||+|||   +.+|+||||||
T Consensus       125 lv~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp  177 (387)
T 1kob_A          125 LILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKP  177 (387)
T ss_dssp             EEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccch
Confidence            999999999999998643 346999999999999999999999   88999999997

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.83  E-value=1.9e-20  Score=180.82  Aligned_cols=123  Identities=9%  Similarity=-0.048  Sum_probs=106.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||.++....   ...+.|.+|++++.+++|+||+++++++.     +++.
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~~  105 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH-----TRAG  105 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE-----ECCc
Confidence            5688889999999999999985 4589999999975432   22368999999999999999999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++..   . .......+|+.|+++||+|||   +.+|+||||||
T Consensus       106 ~~lv~e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp  157 (286)
T 3uqc_A          106 GLVVAEWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHP  157 (286)
T ss_dssp             EEEEEECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSG
T ss_pred             EEEEEEecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCc
Confidence            8999999999999999943   2 355578889999999999999   88999999997

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.83  E-value=1.3e-20  Score=183.92  Aligned_cols=128  Identities=30%  Similarity=0.469  Sum_probs=110.3

Q ss_pred             HhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ..++|...+.||+|+||.||+++. +|+.||||++....  ....++|.+|++++++++|+||+++++++.     ..+.
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~  108 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT-----QPPN  108 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----STTC
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCc
Confidence            346788889999999999999987 68899999997543  233467999999999999999999999997     4556


Q ss_pred             EEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                      .++||||+++|+|.+++.... ...+++..+..|+.||++||+|||   +.+  |+||||||
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp  167 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKS  167 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCG
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCCh
Confidence            799999999999999997532 123999999999999999999999   777  99999997

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.83  E-value=9.2e-21  Score=180.86  Aligned_cols=126  Identities=27%  Similarity=0.441  Sum_probs=109.9

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||+|...+++.||||.++... ...+.|.+|++++.+++|+||+++++++.      .+..++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~   84 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYI   84 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCEE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCcEE
Confidence            35677889999999999999998888899999997533 33568999999999999999999999974      345799


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++++|.+++.......+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp  137 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRA  137 (279)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence            999999999999996432236999999999999999999999   88999999997

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.83  E-value=8.1e-21  Score=193.16  Aligned_cols=132  Identities=18%  Similarity=0.244  Sum_probs=113.6

Q ss_pred             HHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          283 FDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       283 ~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      +.+++...++|...+.||+|+||.||+++. .+|+.||||+++...   ....+.+.+|+.++..++|||||++++++. 
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-  139 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-  139 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-
Confidence            345556678899999999999999999985 468999999986421   122346889999999999999999999997 


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          +.+..++||||+++|+|.+++...   .+++.....++.||+.||+|||   +.+||||||||
T Consensus       140 ----~~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp  196 (410)
T 3v8s_A          140 ----DDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKP  196 (410)
T ss_dssp             ----CSSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             ----ECCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCH
Confidence                566789999999999999999653   5899999999999999999999   89999999997

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.83  E-value=1.3e-20  Score=186.66  Aligned_cols=138  Identities=17%  Similarity=0.253  Sum_probs=119.1

Q ss_pred             cccccHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-----CCcccc
Q 048791          278 LVRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-----HVNLVA  351 (425)
Q Consensus       278 ~~~f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-----H~NIV~  351 (425)
                      ...+++++.....++|...+.||+|+||.||++.. .+++.||||+++. .....+.+..|++++.+++     |+|||+
T Consensus        22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~  100 (360)
T 3llt_A           22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVK  100 (360)
T ss_dssp             GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred             ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence            44556666666678999999999999999999985 5789999999974 2334467888999999997     999999


Q ss_pred             eeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       352 l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++++.     ..+..++||||+ +++|.+++.......+++.....|+.||++||+|||   +.+||||||||
T Consensus       101 ~~~~~~-----~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp  165 (360)
T 3llt_A          101 YHGKFM-----YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKP  165 (360)
T ss_dssp             EEEEEE-----ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ccceee-----ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCc
Confidence            999997     456789999999 899999998766567999999999999999999999   89999999997

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.83  E-value=1.5e-20  Score=182.00  Aligned_cols=128  Identities=25%  Similarity=0.388  Sum_probs=110.2

Q ss_pred             hcCcccceeecccCcccEEeeec------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      .++|...+.||+|+||.||++..      .+++.||||+++... ....+.+.+|++++++++||||+++++++.     
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----   96 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS-----   96 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-----
Confidence            45688889999999999999974      345889999997533 334468999999999999999999999986     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNG----------------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFH  420 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~----------------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiH  420 (425)
                      +.+..++||||+++|+|.+++.....                      ..+++..+..++.||++||+|||   +.+|+|
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH  173 (314)
T 2ivs_A           97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVH  173 (314)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred             cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcc
Confidence            45668999999999999999976432                      34899999999999999999999   889999


Q ss_pred             cCCCC
Q 048791          421 RDIKA  425 (425)
Q Consensus       421 RDLKp  425 (425)
                      |||||
T Consensus       174 ~dikp  178 (314)
T 2ivs_A          174 RDLAA  178 (314)
T ss_dssp             CCCSG
T ss_pred             cccch
Confidence            99997

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.83  E-value=2.4e-20  Score=185.19  Aligned_cols=127  Identities=19%  Similarity=0.283  Sum_probs=109.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC-----CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-----SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-----~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +.|...+.||+|+||.||++.. .+|+.||||+++..     .....+.+.+|++++.+++||||+++++++.     +.
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~   98 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS-----SD   98 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eC
Confidence            4588889999999999999984 57899999998531     1223568999999999999999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++...  ....+++.....|+.||++||+|||   +.+|+||||||
T Consensus        99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp  158 (351)
T 3c0i_A           99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKP  158 (351)
T ss_dssp             TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCh
Confidence            6789999999999999888652  2345899999999999999999999   88999999997

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.83  E-value=2.5e-20  Score=176.28  Aligned_cols=125  Identities=27%  Similarity=0.460  Sum_probs=111.1

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||++...+++.||||+++.... ..+++.+|++++.+++|+||+++++++.     +.+..++|
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv   81 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPICLV   81 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSCEEE
T ss_pred             hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCCeEEE
Confidence            46778899999999999999987889999999976433 3468999999999999999999999987     45568999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        82 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  132 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA  132 (267)
T ss_dssp             ECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCG
T ss_pred             EeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCch
Confidence            9999999999999764 346899999999999999999999   88999999997

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.83  E-value=2.3e-20  Score=177.94  Aligned_cols=126  Identities=22%  Similarity=0.370  Sum_probs=111.7

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++.. .++..||+|++........+.|.+|++++.+++|+||+++++++.     +++..+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~   82 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE-----DNTDIY   82 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCeEE
Confidence            35688889999999999999985 457899999997655555678999999999999999999999997     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++++|.+++...  ..+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        83 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp  134 (277)
T 3f3z_A           83 LVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKP  134 (277)
T ss_dssp             EEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCH
Confidence            999999999999998653  35899999999999999999999   88999999997

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.83  E-value=2.7e-20  Score=185.87  Aligned_cols=126  Identities=22%  Similarity=0.338  Sum_probs=110.9

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.++...  ....+.+.+|++++.+++|||||++++++.     +.+.
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~  102 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF  102 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence            45688899999999999999985 468999999997533  233467899999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus       103 ~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp  156 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKP  156 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSG
T ss_pred             EEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCch
Confidence            8999999999999999954  346999999999999999999999   88999999997

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.83  E-value=3.5e-20  Score=183.76  Aligned_cols=139  Identities=22%  Similarity=0.334  Sum_probs=118.6

Q ss_pred             cHHHHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCcc-----------chHHHHHHHHHHhhCCCCccc
Q 048791          282 TFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA-----------GDATFKHEVEVIASVRHVNLV  350 (425)
Q Consensus       282 ~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~-----------~~~~f~~Ev~il~~l~H~NIV  350 (425)
                      ...++....++|...+.||+|+||.||++...+|+.||||++......           ..+.+.+|++++.+++|+||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            456788889999999999999999999999878999999998642211           126789999999999999999


Q ss_pred             ceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       351 ~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++++...........++||||++ |+|.+++... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp  162 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHP  162 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCCh
Confidence            9999987544334557899999998 7999888753 346999999999999999999999   88999999997

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.83  E-value=3.1e-20  Score=179.53  Aligned_cols=125  Identities=21%  Similarity=0.226  Sum_probs=109.8

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++. ..+++.||||.+.....   ...+.|.+|+.++.+++||||+++++++.     +++.
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~~   85 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-----EDDC   85 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE-----CSSE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee-----eCCe
Confidence            568888999999999999998 45789999999864322   23467899999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        86 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp  139 (294)
T 4eqm_A           86 YYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKP  139 (294)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             EEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            89999999999999999653  36999999999999999999999   88999999997

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.82  E-value=1.9e-20  Score=180.78  Aligned_cols=127  Identities=24%  Similarity=0.316  Sum_probs=105.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--------------------------cchHHHHHHHHHHh
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--------------------------AGDATFKHEVEVIA  342 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--------------------------~~~~~f~~Ev~il~  342 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++.....                          ...+.|.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            35788889999999999999984 5789999999864321                          11256899999999


Q ss_pred             hCCCCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 048791          343 SVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRD  422 (425)
Q Consensus       343 ~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRD  422 (425)
                      +++|+||+++++++...   .+...++||||+++|+|.+++   ....+++.....++.||++||+|||   +.+|+|||
T Consensus        92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~D  162 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRD  162 (298)
T ss_dssp             TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred             hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccC
Confidence            99999999999998742   246789999999999998765   2346999999999999999999999   88999999


Q ss_pred             CCC
Q 048791          423 IKA  425 (425)
Q Consensus       423 LKp  425 (425)
                      |||
T Consensus       163 lkp  165 (298)
T 2zv2_A          163 IKP  165 (298)
T ss_dssp             CCG
T ss_pred             CCH
Confidence            997

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.82  E-value=3.8e-20  Score=179.73  Aligned_cols=125  Identities=22%  Similarity=0.348  Sum_probs=109.2

Q ss_pred             cCccc-ceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSR-DNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~-~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +.|.. .+.||+|+||.||++. ..+|+.||||+++.......+.+.+|++++.++ +|+||+++++++.     +++..
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~-----~~~~~   86 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE-----EEDRF   86 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe-----eCCEE
Confidence            34555 4789999999999998 457899999999865555567899999999995 7999999999997     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        87 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp  139 (316)
T 2ac3_A           87 YLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKP  139 (316)
T ss_dssp             EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             EEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCH
Confidence            9999999999999999653  36899999999999999999999   88999999997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.82  E-value=2.1e-20  Score=185.02  Aligned_cols=125  Identities=22%  Similarity=0.275  Sum_probs=109.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++. .+|+.||||.++..   .......+.+|+.++.+++||||+++++++.     ..+.
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-----~~~~   79 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-----THDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-----CSSE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEE-----eCCE
Confidence            5688889999999999999985 47999999999642   1233467889999999999999999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus        80 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  133 (337)
T 1o6l_A           80 LCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKL  133 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCH
Confidence            89999999999999999653  46899999999999999999999   88999999997

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.82  E-value=3.7e-20  Score=184.69  Aligned_cols=125  Identities=22%  Similarity=0.285  Sum_probs=110.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++.... ...+.+.+|+.++++++|+||+++++++.     ..+..+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~~   92 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVIL-----TPTHLA   92 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEe-----eCCEEE
Confidence            45688889999999999999985 478999999997533 23467899999999999999999999997     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...  ..+++.....|+.|+++||+|||   +.+|+||||||
T Consensus        93 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp  144 (361)
T 3uc3_A           93 IIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKL  144 (361)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCG
T ss_pred             EEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            999999999999999653  35999999999999999999999   89999999997

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.82  E-value=2.7e-20  Score=178.83  Aligned_cols=127  Identities=22%  Similarity=0.342  Sum_probs=111.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++.. .+|..||||++.... ....+.+.+|++++.+++|+||+++++++.     +.+..+
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~   96 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-----DYHNMY   96 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEEE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-----cCCeEE
Confidence            4578889999999999999984 568999999987532 334578999999999999999999999997     566789


Q ss_pred             EEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...  ....+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp  152 (285)
T 3is5_A           97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKP  152 (285)
T ss_dssp             EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSG
T ss_pred             EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCH
Confidence            999999999999998652  2356999999999999999999999   88999999997

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.82  E-value=3.4e-20  Score=180.76  Aligned_cols=126  Identities=26%  Similarity=0.333  Sum_probs=108.2

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++...+|+.||||+++...  ....+.+.+|++++++++|+||+++++++.     .++..
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~   94 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-----SERCL   94 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----CSSCE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc-----cCCEE
Confidence            46688889999999999999998889999999997432  222467899999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ |+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        95 ~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp  147 (311)
T 3niz_A           95 TLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKP  147 (311)
T ss_dssp             EEEEECCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEcCCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCch
Confidence            99999998 5888888653 345999999999999999999999   88999999997

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.82  E-value=3.1e-20  Score=181.78  Aligned_cols=128  Identities=20%  Similarity=0.357  Sum_probs=112.0

Q ss_pred             cCcccceeecccCcccEEeeec-----CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||++.+     .+++.||||++........+.|.+|++++.+++|+||+++++++...   +..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~   99 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQ   99 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SSC
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CCc
Confidence            4677889999999999999983     46889999999876655567899999999999999999999998742   345


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++.... ..+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp  155 (327)
T 3lxl_A          100 SLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA  155 (327)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             eEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCh
Confidence            6899999999999999996532 35999999999999999999999   89999999997

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.82  E-value=3.1e-20  Score=184.30  Aligned_cols=124  Identities=23%  Similarity=0.354  Sum_probs=103.5

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++... +++.||||+++...  ..+.+.+|++++.+++|+||+++++++.     +.+..+
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~  124 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE-----TPTEIS  124 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE-----CSSEEE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe-----cCCeEE
Confidence            466888899999999999999964 58899999997532  3457889999999999999999999997     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++..  ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus       125 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp  176 (349)
T 2w4o_A          125 LVLELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKP  176 (349)
T ss_dssp             EEECCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             EEEEeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCc
Confidence            99999999999999954  346999999999999999999999   88999999997

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=2.8e-20  Score=183.09  Aligned_cols=129  Identities=21%  Similarity=0.366  Sum_probs=108.3

Q ss_pred             HhcCcccceeecccCcccEEeeec------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ..++|...+.||+|+||.||++..      .++..||||.++... ....+.+.+|+.++.++ +||||+++++++.   
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~---  119 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT---  119 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe---
Confidence            356788899999999999999984      246689999997532 33456899999999999 8999999999987   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNG---------------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIF  419 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~Ii  419 (425)
                        ..+..++||||+++|+|.+++.....                     ..++|..+..|+.||++||+|||   +.+|+
T Consensus       120 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv  194 (344)
T 1rjb_A          120 --LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCV  194 (344)
T ss_dssp             --SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred             --eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence              45568999999999999999976432                     24899999999999999999999   88999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      ||||||
T Consensus       195 H~Dikp  200 (344)
T 1rjb_A          195 HRDLAA  200 (344)
T ss_dssp             ETTCSG
T ss_pred             cCCCCh
Confidence            999997

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.82  E-value=2.6e-20  Score=186.92  Aligned_cols=128  Identities=24%  Similarity=0.368  Sum_probs=110.0

Q ss_pred             hcCcccceeecccCcccEEeeec--------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeec
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL--------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIAT  359 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l--------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~  359 (425)
                      .++|...+.||+|+||.||++..        .++..||||+++... ....+++.+|++++.++ +|+|||++++++.  
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~--  145 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT--  145 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec--
Confidence            45688889999999999999973        234679999997543 33346899999999999 8999999999997  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         .++..++||||+++|+|.+++....              ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       146 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  219 (382)
T 3tt0_A          146 ---QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAA  219 (382)
T ss_dssp             ---SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             ---cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCc
Confidence               4566799999999999999997643              245999999999999999999999   88999999997

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.82  E-value=4.8e-20  Score=177.68  Aligned_cols=128  Identities=27%  Similarity=0.436  Sum_probs=107.4

Q ss_pred             cCcccceeecccCcccEEeeec-----CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +.|...+.||+|+||.||++.+     .+++.||||+++... ....+.+.+|++++.+++|+||+++++++...   ..
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~   97 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG   97 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence            3477789999999999999983     468899999997433 33457899999999999999999999998742   23


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp  154 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAA  154 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCch
Confidence            5679999999999999999653 245999999999999999999999   89999999997

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.82  E-value=2.4e-20  Score=180.59  Aligned_cols=128  Identities=23%  Similarity=0.400  Sum_probs=110.5

Q ss_pred             hcCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||++..      .+++.||||+++.... ...+.+.+|+.++.++ +|+||+++++++.    
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~----   97 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT----   97 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe----
Confidence            35688889999999999999973      4578999999975433 3356899999999999 8999999999997    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNG----------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~----------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       .++..++||||+++|+|.+++.....                ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        98 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  173 (313)
T 1t46_A           98 -IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAA  173 (313)
T ss_dssp             -SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             -cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCcc
Confidence             45567999999999999999976432                24999999999999999999999   88999999997

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.82  E-value=1.4e-20  Score=183.41  Aligned_cols=125  Identities=29%  Similarity=0.273  Sum_probs=105.5

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC--ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS--AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||+||+|... +|+.||||++....  .....++..|+..+.++ +|+||+++++++.     +++.
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~~~  131 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EGGI  131 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eCCE
Confidence            56888999999999999999864 79999999986432  23334566777666666 8999999999997     5677


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+ +++|.+++... ...++|..+..|+.||+.||+|||   +.+||||||||
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp  185 (311)
T 3p1a_A          132 LYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKP  185 (311)
T ss_dssp             EEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCH
Confidence            89999999 67999988664 346999999999999999999999   88999999997

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.82  E-value=8e-20  Score=175.35  Aligned_cols=126  Identities=25%  Similarity=0.330  Sum_probs=108.4

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++....+||+|+||.||+|. ..+++.||||.++.......+.+.+|+.++.+++|+||+++++++.     +.+..++|
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv   97 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS-----ENGFIKIF   97 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEE-----eCCcEEEE
Confidence            35556789999999999998 4678999999998665555678999999999999999999999997     45678999


Q ss_pred             EecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++++|.+++.... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  150 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKG  150 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCCh
Confidence            99999999999997643 335789999999999999999999   88999999997

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.82  E-value=5.2e-20  Score=180.69  Aligned_cols=125  Identities=22%  Similarity=0.331  Sum_probs=109.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++. .+|+.||||.++...   ....+.+.+|+.+++.++||||+++++++.     +.+.
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~~   80 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-----DAQQ   80 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-----CSSE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE-----eCCE
Confidence            5688889999999999999985 479999999996421   123457889999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus        81 ~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  134 (318)
T 1fot_A           81 IFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKP  134 (318)
T ss_dssp             EEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCG
T ss_pred             EEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCh
Confidence            89999999999999999653  46899999999999999999999   89999999997

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.82  E-value=3.3e-20  Score=181.98  Aligned_cols=125  Identities=28%  Similarity=0.545  Sum_probs=102.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCe----eEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSE----VALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~----VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||.||+|.. .+|+.    ||+|.++.. .....++|.+|+.++++++|+||+++++++..      
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------   88 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------   88 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence            4578889999999999999984 45554    588887643 23445789999999999999999999999973      


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++|+||+++|+|.+++.... ..+++..++.|+.||++||+|||   +.+||||||||
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp  145 (327)
T 3poz_A           89 STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAA  145 (327)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CCeEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCh
Confidence            34689999999999999997643 46999999999999999999999   88999999997

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.82  E-value=3e-20  Score=189.09  Aligned_cols=127  Identities=20%  Similarity=0.372  Sum_probs=107.8

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--------ccchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--------AAGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--------~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      ...++|...+.||+|+||.||+|.. .+++.||||++....        ......+.+|++++++++|||||++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            3467899999999999999999984 568999999986421        112235889999999999999999999974 


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                           .+..++||||+++|+|.+++..  ...+++.....|+.|+++||+|||   +.+|+||||||
T Consensus       211 -----~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp  267 (419)
T 3i6u_A          211 -----AEDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKP  267 (419)
T ss_dssp             -----SSEEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             -----cCceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCh
Confidence                 3457999999999999998854  356999999999999999999999   88999999997

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.82  E-value=3.2e-20  Score=182.35  Aligned_cols=126  Identities=24%  Similarity=0.316  Sum_probs=104.3

Q ss_pred             hcCcccceeecccCcccEEeeec----CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS----AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||++..    .+|+.||||+++...    ......+.+|++++.+++|+||+++++++.    
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----   91 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ----   91 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE----
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE----
Confidence            35688889999999999999985    578999999997532    223356889999999999999999999987    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       .++..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus        92 -~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp  149 (327)
T 3a62_A           92 -TGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKP  149 (327)
T ss_dssp             -CSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCT
T ss_pred             -cCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCH
Confidence             456789999999999999999653  35899999999999999999999   88999999997

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.82  E-value=9.9e-20  Score=174.39  Aligned_cols=125  Identities=29%  Similarity=0.545  Sum_probs=106.8

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccc-------hHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAG-------DATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~-------~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||++.. .+++.||||++.......       .+.|.+|++++.+++|+||+++++++..   
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---   94 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---   94 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence            35688889999999999999985 578999999986433211       1678999999999999999999999852   


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                        .  .++||||+++|+|.+++... ...++|..+..++.|+++||+|||   +.+  |+||||||
T Consensus        95 --~--~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp  152 (287)
T 4f0f_A           95 --P--PRMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRS  152 (287)
T ss_dssp             --T--TEEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSG
T ss_pred             --C--CeEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCc
Confidence              2  27999999999999998754 346999999999999999999999   777  99999997

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.82  E-value=3.4e-20  Score=187.06  Aligned_cols=129  Identities=25%  Similarity=0.341  Sum_probs=109.8

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|++++++++|+||+++++++...   .....+
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---~~~~~~   85 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRHKV   85 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCCEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC---CCCeeE
Confidence            4577889999999999999985 458999999997533 23356788999999999999999999998742   234679


Q ss_pred             EEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  140 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKP  140 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCH
Confidence            9999999999999996532 234999999999999999999999   88999999997

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.82  E-value=5.7e-20  Score=177.16  Aligned_cols=127  Identities=25%  Similarity=0.358  Sum_probs=109.6

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++... +|+.||+|.+........+.|.+|++++.+++||||+++++++.     ..+..+
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~   92 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY-----HDGKLW   92 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CC-CEE
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeee-----eCCeEE
Confidence            456888899999999999999964 68999999997655556678999999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++++|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        93 lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  145 (302)
T 2j7t_A           93 IMIEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKA  145 (302)
T ss_dssp             EEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSG
T ss_pred             EEEEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCH
Confidence            999999999999998653 245999999999999999999999   88999999997

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.82  E-value=1.8e-20  Score=183.57  Aligned_cols=129  Identities=22%  Similarity=0.383  Sum_probs=109.6

Q ss_pred             HhcCcccceeecccCcccEEeeecC-CC-----CeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP-DG-----SEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~-~g-----~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ..++|...+.||+|+||.||++... ++     ..||||.++.... ...+.+.+|+.++.++ +||||+++++++.   
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---  120 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT---  120 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe---
Confidence            3577889999999999999999842 23     4799999975432 3456799999999999 8999999999997   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASN------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        +++..++||||+++|+|.+++....            ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus       121 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp  192 (333)
T 2i1m_A          121 --HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAA  192 (333)
T ss_dssp             --SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             --cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCccc
Confidence              4567899999999999999996521            345899999999999999999999   88999999997

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.82  E-value=5.6e-20  Score=176.71  Aligned_cols=125  Identities=25%  Similarity=0.359  Sum_probs=108.9

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++...+|+.||||+++....  ...+.+.+|++++++++||||+++++++.     ..+..+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~   76 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-----TKKRLV   76 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-----CSSCEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-----cCCeEE
Confidence            46788899999999999999987899999999964332  22467899999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ ++|.+++... ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        77 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  128 (288)
T 1ob3_A           77 LVFEHLD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKP  128 (288)
T ss_dssp             EEEECCS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEecC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            9999998 5999988653 356999999999999999999999   88999999997

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=1.9e-20  Score=184.21  Aligned_cols=133  Identities=23%  Similarity=0.301  Sum_probs=110.3

Q ss_pred             HHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC-----CccchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-----SAAGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-----~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      ++....++|...+.||+|+||.||++.. .+++.||||++...     .....+.+.+|++++++++||||+++++++. 
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-   98 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE-   98 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc-
Confidence            3445567899999999999999999984 56889999998632     2344578999999999999999999999997 


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcC--------------------------------------CCCCCCHHHHHHHH
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFAS--------------------------------------NGPKLSWPLRQSIA  400 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~--------------------------------------~~~~L~~~~r~~Ia  400 (425)
                          +.+..++||||+++|+|.+++...                                      ....+++.....|+
T Consensus        99 ----~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  174 (345)
T 3hko_A           99 ----DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM  174 (345)
T ss_dssp             ----CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred             ----cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence                566789999999999999998420                                      01124567788899


Q ss_pred             HHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          401 LGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       401 ~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .||++||+|||   +.+|+||||||
T Consensus       175 ~qi~~~l~~LH---~~~ivH~Dlkp  196 (345)
T 3hko_A          175 RQIFSALHYLH---NQGICHRDIKP  196 (345)
T ss_dssp             HHHHHHHHHHH---HTTEECCCCCG
T ss_pred             HHHHHHHHHHH---HCCccccCCCh
Confidence            99999999999   88999999997

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.82  E-value=5.1e-20  Score=180.91  Aligned_cols=128  Identities=22%  Similarity=0.393  Sum_probs=108.4

Q ss_pred             hcCcccceeecccCcccEEeeec--------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeec
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL--------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIAT  359 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l--------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~  359 (425)
                      .++|...+.||+|+||.||++..        .++..||||+++... ....+.+.+|++++.++ +|+||+++++++.  
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~--  111 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT--  111 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc--
Confidence            45788889999999999999974        356789999997543 23456799999999999 8999999999997  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNG--------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~--------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         ..+..++||||+++|+|.+++.....              ..++|..+..++.||++||+|||   +.+|+||||||
T Consensus       112 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  185 (334)
T 2pvf_A          112 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA  185 (334)
T ss_dssp             ---SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ---cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCcc
Confidence               45678999999999999999976431              24899999999999999999999   88999999997

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.81  E-value=2e-20  Score=181.94  Aligned_cols=130  Identities=24%  Similarity=0.316  Sum_probs=110.7

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||+++....   .....|.+|++++.+++|+||+++++++..... .+.
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-~~~   89 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP-AGP   89 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET-TEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC-CCc
Confidence            3568888999999999999998 46789999999975322   223578999999999999999999999875432 233


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  144 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKP  144 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             ccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCH
Confidence            459999999999999999653  36999999999999999999999   88999999997

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.81  E-value=6.9e-20  Score=179.36  Aligned_cols=128  Identities=22%  Similarity=0.406  Sum_probs=110.2

Q ss_pred             cCcccceeecccCcccEEeeec-----CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||++.+     .+|+.||||++........+.|.+|++++.+++|+||+++++++...   +..
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~  117 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR  117 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---CCC
Confidence            4577889999999999999983     46889999999876555567899999999999999999999998642   233


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus       118 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp  173 (326)
T 2w1i_A          118 NLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLAT  173 (326)
T ss_dssp             CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             ceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCc
Confidence            679999999999999999764 345999999999999999999999   88999999997

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.81  E-value=8.5e-20  Score=178.34  Aligned_cols=127  Identities=28%  Similarity=0.406  Sum_probs=96.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|++++++++||||+++++++.     .++..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH-----TENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC-----CTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE-----ECCeE
Confidence            45678889999999999999985 468999999997533 233467899999999999999999999987     56678


Q ss_pred             EEEEecCCCCCHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFAS----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~----~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ |+|.+++...    ....+++..+..++.||++||+|||   +.+|+||||||
T Consensus        79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp  136 (317)
T 2pmi_A           79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKP  136 (317)
T ss_dssp             EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCh
Confidence            99999998 6999998652    2245999999999999999999999   88999999997

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.81  E-value=5.3e-20  Score=175.44  Aligned_cols=129  Identities=26%  Similarity=0.429  Sum_probs=110.1

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-------
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-------  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-------  361 (425)
                      .++|...+.||+|+||.||++... +|+.||||+++...    +.+.+|++++.+++|+||+++++++.....       
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            356888899999999999999864 79999999997532    467899999999999999999998753110       


Q ss_pred             ----cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 ----LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ----~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          ......++||||+++|+|.+++.......+++..+..++.|+++||.|||   +.+|+||||||
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp  150 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKP  150 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCH
Confidence                12345799999999999999997655567999999999999999999999   88999999997

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.81  E-value=4.7e-20  Score=183.75  Aligned_cols=126  Identities=21%  Similarity=0.276  Sum_probs=109.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|+||.||+++. .+|+.||||+++..   .....+.+.+|.+++..+ +||||+++++++.     ..
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-----~~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ-----TP   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-----eC
Confidence            56799999999999999999984 56899999999742   122345688999999998 6999999999987     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp  152 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKL  152 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             CEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCH
Confidence            6789999999999999999653  45999999999999999999999   88999999997

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.81  E-value=5.2e-20  Score=174.67  Aligned_cols=127  Identities=31%  Similarity=0.545  Sum_probs=104.0

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCc----cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA----AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~----~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++.. .|+.||||.++....    ...+.+.+|++++++++|+||+++++++.     +++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   79 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL-----KEP   79 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----CC-
T ss_pred             hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-----cCC
Confidence            35688889999999999999997 488999999874322    22467899999999999999999999997     455


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++.   ...+++..+..++.|+++||+|||.....+|+||||||
T Consensus        80 ~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp  136 (271)
T 3dtc_A           80 NLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS  136 (271)
T ss_dssp             -CEEEEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSG
T ss_pred             ceEEEEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCch
Confidence            6799999999999999984   34699999999999999999999932222399999997

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.81  E-value=7.6e-20  Score=176.01  Aligned_cols=125  Identities=22%  Similarity=0.351  Sum_probs=106.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||+||++.. .+|+.||||+++....  ...+.+.+|++++.+++|+||+++++++.     .++..
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-----eCCEE
Confidence            4688889999999999999985 4689999999974332  23467899999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ |++.+++... ...+++.....|+.|+++||+|||   +.+|+||||||
T Consensus        77 ~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp  129 (292)
T 3o0g_A           77 TLVFEFCD-QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKP  129 (292)
T ss_dssp             EEEEECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            99999998 4666666543 356999999999999999999999   88999999997

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.81  E-value=6.3e-20  Score=179.25  Aligned_cols=126  Identities=24%  Similarity=0.330  Sum_probs=110.3

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCcc------chHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAA------GDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~------~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.++.....      ..+++.+|+.++.+++|+||+++++++.     
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----   85 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE-----   85 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe-----
Confidence            34588889999999999999985 46899999999753221      2467999999999999999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.+..++||||+++++|.+++..  ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp  143 (321)
T 2a2a_A           86 NRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKP  143 (321)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             cCCEEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCh
Confidence            56678999999999999999964  346899999999999999999999   88999999997

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.81  E-value=6.9e-20  Score=179.68  Aligned_cols=123  Identities=21%  Similarity=0.236  Sum_probs=107.8

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||+|. ..+|+.||||.+.....  .+.+.+|++++.++ +|+||+++++++.     .++..+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~-----~~~~~~   81 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGP-----CGKYNA   81 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEE-----ETTEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEe-----cCCccE
Confidence            568889999999999999998 46799999999875332  34689999999999 8999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+ +++|.+++... ...+++..+..|+.|+++||+|||   +.+||||||||
T Consensus        82 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp  133 (330)
T 2izr_A           82 MVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKP  133 (330)
T ss_dssp             EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCH
Confidence            999999 89999999754 356999999999999999999999   88999999997

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.81  E-value=5.9e-20  Score=175.80  Aligned_cols=126  Identities=26%  Similarity=0.363  Sum_probs=107.7

Q ss_pred             hcCcccceeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|+||.||+|...    .+..||||.++... ....+.|.+|+.++++++||||+++++++.      .
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~   87 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------E   87 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------S
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------c
Confidence            356788899999999999999853    24579999987543 333567999999999999999999999973      3


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  144 (281)
T 1mp8_A           88 NPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA  144 (281)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             CccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccH
Confidence            4579999999999999999754 346999999999999999999999   88999999997

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.81  E-value=6e-20  Score=193.93  Aligned_cols=128  Identities=23%  Similarity=0.321  Sum_probs=112.2

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...++||+|+||.||++.. .+|+.||||++...   .......+.+|++++.+++|+|||++++++.     +.+
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-----~~~  257 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-----TKD  257 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-----eCC
Confidence            45688889999999999999985 47999999999642   1233467889999999999999999999987     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++.......+++..+..++.||+.||+|||   +.+||||||||
T Consensus       258 ~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKP  314 (576)
T 2acx_A          258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKP  314 (576)
T ss_dssp             EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCch
Confidence            7899999999999999997765556999999999999999999999   88999999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.81  E-value=3e-20  Score=181.23  Aligned_cols=134  Identities=23%  Similarity=0.380  Sum_probs=103.4

Q ss_pred             HhcCcccceeecccCcccEEeeecCC-C---CeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLPD-G---SEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~~-g---~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      ..++|...+.||+|+||.||++.... +   ..||||.++..  .....++|.+|++++++++|+||+++++++......
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  100 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK  100 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence            35678899999999999999998643 3   27999999753  334457899999999999999999999998743221


Q ss_pred             C-CceEEEEEecCCCCCHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 E-GHQRIIVCDLMKNGSVYDHLFAS----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~-~~~~~LV~Ey~~~GsL~~~L~~~----~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      . ....++||||+++|+|.+++...    ....+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp  165 (323)
T 3qup_A          101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAA  165 (323)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCc
Confidence            0 11238999999999999999652    2235999999999999999999999   88999999997

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.81  E-value=6.2e-20  Score=179.65  Aligned_cols=128  Identities=28%  Similarity=0.442  Sum_probs=107.8

Q ss_pred             hcCcccceeecccCcccEEeeec------CCCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      .++|...+.||+|+||.||+|..      .+++.||||++... ......+|.+|+.++.+++|+||+++++++.     
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----  103 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-----  103 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-----
Confidence            35688889999999999999984      35778999999743 3344568999999999999999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNG-----PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~-----~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +....++||||+++|+|.+++.....     ..+++..+..++.||++||.|||   +.+|+||||||
T Consensus       104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp  168 (327)
T 2yfx_A          104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAA  168 (327)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCH
Confidence            45567999999999999999976432     45999999999999999999999   88999999997

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.81  E-value=1e-19  Score=173.79  Aligned_cols=125  Identities=22%  Similarity=0.364  Sum_probs=109.7

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCc------cchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA------AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||++... +|+.||||.++....      ...+.|.+|++++.+++|+||+++++++.     .
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~   79 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE-----N   79 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec-----C
Confidence            45788899999999999999854 689999999874321      13568999999999999999999999997     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..++||||+++++|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  136 (283)
T 3bhy_A           80 KTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKP  136 (283)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             CCeEEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCh
Confidence            66789999999999999999653  46999999999999999999999   88999999997

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.81  E-value=5e-20  Score=185.74  Aligned_cols=125  Identities=22%  Similarity=0.271  Sum_probs=109.4

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||.+....   ....+.+.+|++++.+++|||||++++++.     ..+.
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-----~~~~   89 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ-----DEED   89 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eCCE
Confidence            4678889999999999999984 468899999986421   233467889999999999999999999997     5567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++..  ...+++.....++.||+.||+|||   +.+||||||||
T Consensus        90 ~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp  143 (384)
T 4fr4_A           90 MFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKP  143 (384)
T ss_dssp             EEEEECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcH
Confidence            8999999999999999964  346999999999999999999999   89999999997

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.81  E-value=7.2e-20  Score=174.54  Aligned_cols=127  Identities=24%  Similarity=0.398  Sum_probs=110.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||+++. .+|+.||||.+....   ....+.+.+|++++.+++|+||+++++++.     +.+
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   84 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-----DSN   84 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-----CSS
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-----cCC
Confidence            35688889999999999999984 579999999996421   122367899999999999999999999987     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  140 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTL  140 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCG
T ss_pred             eEEEEEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            789999999999999999653 356999999999999999999999   88999999997

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.81  E-value=4.3e-20  Score=179.29  Aligned_cols=138  Identities=24%  Similarity=0.373  Sum_probs=107.9

Q ss_pred             HHHHHhcCcccceeecccCcccEEeeecC----CCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      ++....++|...+.||+|+||.||+|...    +++.||||.++...  ....+.|.+|+.++.+++|+||+++++++..
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            33334567888899999999999999743    34589999997432  2334679999999999999999999999975


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFAS----NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~----~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .........++||||+++|+|.+++...    ....+++..+..|+.||++||.|||   +.+|+||||||
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp  175 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAA  175 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSG
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCc
Confidence            4322223569999999999999998542    3456999999999999999999999   89999999997

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.81  E-value=7.6e-20  Score=181.52  Aligned_cols=125  Identities=24%  Similarity=0.282  Sum_probs=108.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+++. .+|+.||||+++...   ....+.+.+|..++.++ +|||||++++++.     ..+
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-----~~~   83 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TES   83 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE-----eCC
Confidence            4678889999999999999985 468999999997532   22345688999999988 8999999999987     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  138 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKL  138 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCH
Confidence            789999999999999999653  35999999999999999999999   88999999997

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.81  E-value=1.3e-19  Score=173.08  Aligned_cols=126  Identities=23%  Similarity=0.346  Sum_probs=110.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.++.+++|+||+++++++.     +++.
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   79 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF   79 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-----cCCE
Confidence            46788899999999999999984 56899999999643  2333467889999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        80 ~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp  133 (284)
T 3kk8_A           80 HYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKP  133 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             EEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCH
Confidence            89999999999999988653  45999999999999999999999   88999999997

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.81  E-value=3e-20  Score=180.07  Aligned_cols=137  Identities=20%  Similarity=0.363  Sum_probs=113.8

Q ss_pred             cHHHHHHHhcCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCccccee
Q 048791          282 TFDDIKKATRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALR  353 (425)
Q Consensus       282 ~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~  353 (425)
                      ...+.....++|...+.||+|+||.||++..      .+++.||||.++.... ...+.+.+|+.++.++ +|+||++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            3344444567899999999999999999972      4578999999975433 3346799999999999 699999999


Q ss_pred             eEEeeccccCCceEEEEEecCCCCCHHHHHhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 048791          354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG--------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIF  419 (425)
Q Consensus       354 g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~--------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~Ii  419 (425)
                      +++..    .+...++||||+++|+|.+++.....              ..+++..+..++.|+++||.|||   +.+|+
T Consensus        98 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~  170 (316)
T 2xir_A           98 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCI  170 (316)
T ss_dssp             EEECC----TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             EEEec----CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence            99864    34457999999999999999976432              22899999999999999999999   88999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      ||||||
T Consensus       171 H~dikp  176 (316)
T 2xir_A          171 HRDLAA  176 (316)
T ss_dssp             CSCCSG
T ss_pred             cccCcc
Confidence            999997

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.81  E-value=1.4e-20  Score=183.25  Aligned_cols=134  Identities=25%  Similarity=0.391  Sum_probs=113.2

Q ss_pred             HHHHHHhcCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEE
Q 048791          284 DDIKKATRNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYC  356 (425)
Q Consensus       284 ~ei~~at~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~  356 (425)
                      ++.....++|...+.||+|+||.||+|...      +++.||||.+.... ......|.+|++++.+++|+||+++++++
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            344455678999999999999999999743      46789999997543 23345799999999999999999999998


Q ss_pred             eeccccCCceEEEEEecCCCCCHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          357 IATTQLEGHQRIIVCDLMKNGSVYDHLFAS--------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       357 ~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~--------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .     +++..++||||+++|+|.+++...        ....+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        98 ~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp  166 (322)
T 1p4o_A           98 S-----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAA  166 (322)
T ss_dssp             C-----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSG
T ss_pred             c-----cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCcc
Confidence            6     455679999999999999999652        1245799999999999999999999   88999999997

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.81  E-value=5.9e-20  Score=182.48  Aligned_cols=128  Identities=20%  Similarity=0.273  Sum_probs=109.8

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ...++|...+.||+|+||.||+++. .+|+.||||+++...   ....+.+..|.+++.++ +||||+++++++.     
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~-----   88 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-----   88 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-----
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE-----
Confidence            3467899999999999999999985 468999999997421   22345678899999887 8999999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        89 ~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  146 (345)
T 1xjd_A           89 TKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKL  146 (345)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCh
Confidence            456789999999999999999653  35999999999999999999999   88999999997

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.81  E-value=6.8e-20  Score=195.49  Aligned_cols=118  Identities=21%  Similarity=0.408  Sum_probs=103.6

Q ss_pred             eecccCcccEEeeecC---CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEec
Q 048791          298 IIGRGGYGNVYKGLLP---DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       298 ~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      .||+|+||.||+|.+.   ++..||||+++... ....++|.+|+++|++++|+|||+++|++..      +..++||||
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~~lv~E~  416 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEM  416 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSEEEEEEC
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCeEEEEEe
Confidence            7999999999999753   56789999998643 3345789999999999999999999999862      358999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|+|.+++... ...+++..+..|+.||++||+|||   +.+||||||||
T Consensus       417 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp  464 (613)
T 2ozo_A          417 AGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAA  464 (613)
T ss_dssp             CTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             CCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCH
Confidence            9999999999653 456999999999999999999999   88999999997

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.81  E-value=9.6e-20  Score=176.29  Aligned_cols=125  Identities=23%  Similarity=0.408  Sum_probs=107.8

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||.++.......+.+.+|++++.+++|+||+++++++.     +.+..++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l   83 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE-----STTHYYL   83 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc-----cCCEEEE
Confidence            4578889999999999999985 478999999998654444567899999999999999999999987     5667899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp  134 (304)
T 2jam_A           84 VMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKP  134 (304)
T ss_dssp             EECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCG
T ss_pred             EEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence            99999999999998653  35899999999999999999999   88999999997

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.81  E-value=3.1e-20  Score=182.86  Aligned_cols=127  Identities=18%  Similarity=0.310  Sum_probs=111.0

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCcc---c--------------hHHHHHHHHHHhhCCCCcccce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAA---G--------------DATFKHEVEVIASVRHVNLVAL  352 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~---~--------------~~~f~~Ev~il~~l~H~NIV~l  352 (425)
                      .++|...+.||+|+||.||++.. +|+.||||.+......   .              .+.|.+|++++.+++|+||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46788899999999999999998 8999999998642111   1              1789999999999999999999


Q ss_pred             eeEEeeccccCCceEEEEEecCCCCCHHHH------HhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDH------LFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       353 ~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~------L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      ++++.     +.+..++||||+++|+|.++      +.......+++..+..|+.|+++||+|||   + .+|+||||||
T Consensus       109 ~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p  180 (348)
T 2pml_X          109 EGIIT-----NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKP  180 (348)
T ss_dssp             SEEEE-----SSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCG
T ss_pred             EEEEe-----eCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCCh
Confidence            99997     56688999999999999998      64433567999999999999999999999   6 8999999997

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.81  E-value=2.9e-20  Score=181.35  Aligned_cols=141  Identities=27%  Similarity=0.412  Sum_probs=118.1

Q ss_pred             ccHHHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEee
Q 048791          281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIA  358 (425)
Q Consensus       281 f~~~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~  358 (425)
                      +++.++....++|...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++.++ +|+||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            44455556678899999999999999999985 578999999997532 3456899999999999 79999999999975


Q ss_pred             cccc-CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQL-EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~-~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .... ..+..++||||+++|+|.+++.......+++.....|+.||++||+|||   +.+|+||||||
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp  157 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKG  157 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSG
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcH
Confidence            3221 1457899999999999999997655557999999999999999999999   88999999997

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.81  E-value=1.6e-19  Score=176.32  Aligned_cols=124  Identities=23%  Similarity=0.387  Sum_probs=107.1

Q ss_pred             cccceeecccCcccEEeeec-----CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-----PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-----~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      |...+.||+|+||.||++.+     .+|+.||||+++... ....+.|.+|++++++++|+||+++++++...   ....
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~  109 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---GAAS  109 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---TTTE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---CCce
Confidence            47789999999999988753     368899999997543 23356799999999999999999999999753   2457


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...   .+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp  162 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAA  162 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCch
Confidence            89999999999999999553   4999999999999999999999   88999999997

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.81  E-value=8.6e-20  Score=181.54  Aligned_cols=125  Identities=22%  Similarity=0.289  Sum_probs=109.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++. .+|+.||||.++...   ....+.+.+|++++.+++||||+++++++.     +.+.
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~  115 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-----DNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----cCCE
Confidence            5688889999999999999985 479999999996422   233467889999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus       116 ~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  169 (350)
T 1rdq_E          116 LYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP  169 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCcc
Confidence            89999999999999999653  35999999999999999999999   89999999997

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.81  E-value=1.5e-19  Score=177.47  Aligned_cols=117  Identities=19%  Similarity=0.325  Sum_probs=104.5

Q ss_pred             ceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEEEEec
Q 048791          296 DNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      .+.||+|+||.||++.. .+|+.||||++..   .....+.+|+.++.+++ ||||+++++++.     ++...++||||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~-----~~~~~~lv~e~   87 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFH-----DQLHTFLVMEL   87 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSEEEEEECC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEE-----cCCEEEEEEEc
Confidence            47899999999999985 4689999999964   23467889999999997 999999999997     56678999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++|+|.+++...  ..+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        88 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp  134 (325)
T 3kn6_A           88 LNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKP  134 (325)
T ss_dssp             CCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCH
Confidence            9999999999754  46999999999999999999999   88999999997

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.81  E-value=1.2e-19  Score=175.86  Aligned_cols=125  Identities=22%  Similarity=0.310  Sum_probs=109.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||++.....  ...+.+.+|++++.+++|+||+++++++.     ..+..
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~   77 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKRRL   77 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCCeE
Confidence            5688889999999999999985 4689999999865332  22467889999999999999999999997     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++++|.+++...  ..+++.....|+.|+++||+|||   +.+|+||||||
T Consensus        78 ~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp  130 (311)
T 4agu_A           78 HLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKP  130 (311)
T ss_dssp             EEEEECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCh
Confidence            9999999999999887543  45999999999999999999999   88999999997

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.81  E-value=1.7e-19  Score=174.95  Aligned_cols=133  Identities=27%  Similarity=0.353  Sum_probs=108.1

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-----ccchHHHHHHHHHHhhCC---CCcccceeeEEeec
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-----AAGDATFKHEVEVIASVR---HVNLVALRGYCIAT  359 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-----~~~~~~f~~Ev~il~~l~---H~NIV~l~g~~~~~  359 (425)
                      ..++|...+.||+|+||.||++.. .+|+.||||+++...     ......+.+|++++.+++   |+||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999999984 578999999986322     112356778888887775   99999999999754


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ........++||||++ |+|.+++.......+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp  148 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKP  148 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCT
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            3222235799999997 69999998765556999999999999999999999   88999999997

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.81  E-value=9.1e-20  Score=175.61  Aligned_cols=127  Identities=25%  Similarity=0.417  Sum_probs=107.3

Q ss_pred             cCcccceeecccCcccEEeeecCC----CCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD----GSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~----g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .+|...+.||+|+||.||+|...+    +..||||.++.... ...+.|.+|++++++++|+||+++++++..    .++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~  100 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEG  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc----CCC
Confidence            346777999999999999998532    23589999875433 344689999999999999999999999864    345


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++... ...+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       101 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp  156 (298)
T 3f66_A          101 SPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAA  156 (298)
T ss_dssp             CCEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             ceEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCch
Confidence            679999999999999999653 356899999999999999999999   88999999997

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.80  E-value=6.8e-20  Score=188.14  Aligned_cols=130  Identities=18%  Similarity=0.281  Sum_probs=101.9

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++....  ....+.+.+|++++.+++|+|||++++++..........
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            36788899999999999999984 478999999996532  233467899999999999999999999986543324467


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+. |+|.+++..  ...+++.....|+.||++||+|||   +.+||||||||
T Consensus       132 ~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp  184 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKP  184 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             EEEEEeccc-cchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCCh
Confidence            899999985 899999864  346999999999999999999999   88999999997

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.80  E-value=9.3e-20  Score=187.20  Aligned_cols=126  Identities=19%  Similarity=0.298  Sum_probs=109.3

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++. ..+|+.||+|.+....  ....+.+.+|++++++++|||||++++++.     +++.
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----~~~~   84 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-----EEGH   84 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-----CSSE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-----ECCE
Confidence            4568888999999999999997 4579999999997533  223467899999999999999999999987     5678


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        85 ~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp  138 (444)
T 3soa_A           85 HYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKP  138 (444)
T ss_dssp             EEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSS
T ss_pred             EEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCH
Confidence            89999999999999999754  46999999999999999999999   88999999998

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.80  E-value=7.7e-20  Score=185.12  Aligned_cols=126  Identities=23%  Similarity=0.275  Sum_probs=108.1

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...++||+|+||.||+++. .+++.||||+++...   ....+.+.+|..++.++ +|||||++++++.     ..
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-----~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-----CS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-----EC
Confidence            35688889999999999999985 468899999997432   22335688999999887 8999999999987     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp  181 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKL  181 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             CEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCH
Confidence            6789999999999999999653  46999999999999999999999   88999999997

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1.1e-19  Score=178.83  Aligned_cols=126  Identities=28%  Similarity=0.450  Sum_probs=107.7

Q ss_pred             cCcccceeecccCcccEEeeecCC-----CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD-----GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~-----g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||.||+|....     +..||||.++... .....+|.+|++++.+++|+||+++++++.     ..
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~  118 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-----KY  118 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SS
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-----cC
Confidence            346667999999999999998532     2359999997543 333467999999999999999999999986     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++... ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus       119 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp  175 (333)
T 1mqb_A          119 KPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAA  175 (333)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCh
Confidence            6789999999999999999753 346999999999999999999999   88999999997

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.80  E-value=2.9e-20  Score=190.42  Aligned_cols=126  Identities=23%  Similarity=0.263  Sum_probs=101.3

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||+++..   .......+.+|+.++.+++|+||+++++++.     ..+
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-----~~~  221 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THD  221 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-----ETT
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-----eCC
Confidence            3568889999999999999998 457999999999742   2333457889999999999999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++...  ..+++..+..++.||++||+|||   + .+||||||||
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp  277 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKL  277 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCG
T ss_pred             EEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCH
Confidence            789999999999999999653  36999999999999999999999   6 8999999997

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.80  E-value=1.4e-19  Score=172.48  Aligned_cols=130  Identities=21%  Similarity=0.286  Sum_probs=109.8

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||+|.+....  ....+.+.+|++++++++|+||+++++++...   .+..
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence            45688889999999999999985 478999999997533  23346799999999999999999999988643   3457


Q ss_pred             EEEEEecCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFAS--NGPKLSWPLRQSIALGTARGLAYLHFGAQPA-----IFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~--~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~-----IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ....+++..+..|+.|+++||+|||   +.+     |+||||||
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p  144 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKP  144 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSG
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccch
Confidence            89999999999999999752  3345999999999999999999999   656     99999997

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.80  E-value=7.9e-20  Score=181.53  Aligned_cols=125  Identities=30%  Similarity=0.436  Sum_probs=107.6

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +.|...+.||+|+||.||+|. ..+|+.||||++.....   ...++|.+|++++.+++|+|||++++++.     .++.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~  128 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHT  128 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCe
Confidence            347788999999999999998 46799999999975332   22357899999999999999999999997     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||++ |+|.+++... ...++|..+..++.|+++||+|||   +.+|+||||||
T Consensus       129 ~~lv~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  182 (348)
T 1u5q_A          129 AWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKA  182 (348)
T ss_dssp             EEEEEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSG
T ss_pred             EEEEEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCH
Confidence            899999997 7888888543 346999999999999999999999   88999999997

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.80  E-value=2.8e-19  Score=172.81  Aligned_cols=124  Identities=26%  Similarity=0.377  Sum_probs=109.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +.|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.++.+++|+||+++++++.     .....+
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~   96 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW   96 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEE
Confidence            4578889999999999999984 578999999997543 334578999999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++++|.+++..   ..+++..+..++.|+++||.|||   +.+|+||||||
T Consensus        97 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  147 (303)
T 3a7i_A           97 IIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLH---SEKKIHRDIKA  147 (303)
T ss_dssp             EEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCh
Confidence            99999999999999843   46999999999999999999999   88999999997

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.80  E-value=1.2e-19  Score=173.27  Aligned_cols=126  Identities=27%  Similarity=0.428  Sum_probs=109.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+++.||||.+....   ......+.+|++++++++|+||+++++++.     +.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-----DAT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-----cCC
Confidence            46688889999999999999984 467899999986421   122467899999999999999999999997     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++...  ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp  137 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH---SKRVIHRDIKP  137 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCG
T ss_pred             EEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCCh
Confidence            789999999999999999653  35999999999999999999999   89999999997

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.80  E-value=1.6e-19  Score=174.81  Aligned_cols=128  Identities=22%  Similarity=0.272  Sum_probs=105.1

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccc--------
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ--------  361 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~--------  361 (425)
                      ++|...+.||+|+||.||++... +|+.||||++........+++.+|++++++++|+||+++++++.....        
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            56888899999999999999854 589999999986655556789999999999999999999998753211        


Q ss_pred             -cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 -LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 -~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       .+....++||||++ |+|.+++..   ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  148 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKP  148 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSG
T ss_pred             ccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence             13467899999998 799999843   46999999999999999999999   88999999997

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.80  E-value=1.6e-19  Score=173.35  Aligned_cols=127  Identities=28%  Similarity=0.422  Sum_probs=108.0

Q ss_pred             cccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      |...+.||+|+||.||+|.. .++..||+|.+...  .....+.|.+|+.++++++|+||+++++++..... .+...++
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~~l  106 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK-GKKCIVL  106 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS-SCEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC-CCceEEE
Confidence            56678899999999999984 56889999998743  23345679999999999999999999999864332 3566899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                      ||||+++|+|.+++...  ..+++..+..|+.|+++||+|||   +.+  |+||||||
T Consensus       107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp  159 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKC  159 (290)
T ss_dssp             EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCG
T ss_pred             EEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCH
Confidence            99999999999999653  45899999999999999999999   777  99999997

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.80  E-value=1.4e-19  Score=187.35  Aligned_cols=125  Identities=19%  Similarity=0.341  Sum_probs=109.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+|.. .+|+.||||+++...   ....+.+.+|+.+++.++||||+++++++.     ..+.
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-----~~~~   90 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-----TPSD   90 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCE
Confidence            5688889999999999999985 479999999996422   122457899999999999999999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        91 ~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp  144 (476)
T 2y94_A           91 IFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKP  144 (476)
T ss_dssp             EEEEEECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSG
T ss_pred             EEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccH
Confidence            8999999999999999954  346999999999999999999999   89999999997

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.80  E-value=5.1e-20  Score=180.38  Aligned_cols=125  Identities=26%  Similarity=0.467  Sum_probs=105.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCe----eEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSE----VALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~----VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+.||+|+||.||+|.. .+|+.    ||+|.+.... ......+.+|+.++++++|+||+++++++.      +
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~   86 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------G   86 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------B
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------C
Confidence            4677889999999999999984 45554    7788775432 333457889999999999999999999984      3


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        87 ~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp  143 (325)
T 3kex_A           87 SSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAA  143 (325)
T ss_dssp             SSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSS
T ss_pred             CccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccch
Confidence            4579999999999999999653 346999999999999999999999   88999999997

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.80  E-value=1.1e-19  Score=176.62  Aligned_cols=125  Identities=29%  Similarity=0.521  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||+++.. ++.||||++...  ...+.|.+|++++++++||||+++++++.       +..++|
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~lv   77 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCLV   77 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEEE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEEE
Confidence            45777899999999999999874 789999999643  33568999999999999999999999874       236899


Q ss_pred             EecCCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNG-PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~-~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++..... ..+++..++.++.|+++||+|||.....+|+||||||
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp  133 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKP  133 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSG
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCCh
Confidence            999999999999976432 3589999999999999999999933338999999997

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=6.6e-20  Score=183.93  Aligned_cols=125  Identities=26%  Similarity=0.448  Sum_probs=106.0

Q ss_pred             cccceeecccCcccEEeeecC--CC--CeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP--DG--SEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~--~g--~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      |...+.||+|+||.||+|...  ++  ..||||.++... ....++|.+|+.++++++||||++++++|..    .++..
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~~~~  166 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGSP  166 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CSSCC
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCCCe
Confidence            556789999999999999853  22  468999987533 3345789999999999999999999999863    34467


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++... ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus       167 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp  220 (373)
T 3c1x_A          167 LVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAA  220 (373)
T ss_dssp             EEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccch
Confidence            9999999999999999653 346899999999999999999999   88999999997

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1.8e-19  Score=172.96  Aligned_cols=124  Identities=21%  Similarity=0.398  Sum_probs=105.9

Q ss_pred             Ccccce-eecccCcccEEeeecC---CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          292 NFSRDN-IIGRGGYGNVYKGLLP---DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       292 ~f~~~~-~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      +|...+ .||+|+||.||+|...   ++..||||.++... ....+++.+|++++.+++|+||+++++++.      .+.
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~   83 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AEA   83 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSS
T ss_pred             HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------CCC
Confidence            344444 8999999999999843   57889999998643 334578999999999999999999999984      335


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  138 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAA  138 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             cEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCch
Confidence            79999999999999999643 346999999999999999999999   88999999997

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.80  E-value=1.2e-19  Score=174.50  Aligned_cols=125  Identities=20%  Similarity=0.337  Sum_probs=109.0

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++... +++.||+|.+...   .....+.+.+|++++++++|+||+++++++.     +++.
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~   89 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DNDF   89 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-----cCCE
Confidence            56778899999999999999854 5889999998643   2233467899999999999999999999997     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++...  ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        90 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p  143 (294)
T 2rku_A           90 VFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKL  143 (294)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCh
Confidence            89999999999999988543  36999999999999999999999   88999999997

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.80  E-value=2e-19  Score=180.41  Aligned_cols=131  Identities=21%  Similarity=0.384  Sum_probs=105.2

Q ss_pred             HHHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccc----
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ----  361 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~----  361 (425)
                      ....++|...+.||+|+||.||++. ..+|+.||||++.....    ...+|++++++++|+|||++++++.....    
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            3456789999999999999999998 46799999999875322    23479999999999999999999865322    


Q ss_pred             -----------------------------cCCceEEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHH
Q 048791          362 -----------------------------LEGHQRIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYL  410 (425)
Q Consensus       362 -----------------------------~~~~~~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YL  410 (425)
                                                   .+....++||||++ |+|.+.+..  .....+++.....|+.||++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                         13345789999998 688887754  2345799999999999999999999


Q ss_pred             hcCCCCCeeecCCCC
Q 048791          411 HFGAQPAIFHRDIKA  425 (425)
Q Consensus       411 H~~~~~~IiHRDLKp  425 (425)
                      |   +.+|+||||||
T Consensus       158 H---~~gi~H~Dikp  169 (383)
T 3eb0_A          158 H---SLGICHRDIKP  169 (383)
T ss_dssp             H---TTTEECSCCCG
T ss_pred             H---HCcCccCccCH
Confidence            9   89999999997

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.80  E-value=2.2e-19  Score=174.00  Aligned_cols=128  Identities=25%  Similarity=0.366  Sum_probs=109.3

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||+++...   ....+.+.+|++++.+++|+||+++++++.     +.+
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~  105 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDN  105 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETT
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cCC
Confidence            35688889999999999999984 579999999997432   233467899999999999999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++..  .....+++..+..++.++++||.|||   +.+|+||||||
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p  164 (310)
T 2wqm_A          106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKP  164 (310)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcH
Confidence            78999999999999999864  23456999999999999999999999   88999999997

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.80  E-value=1.1e-19  Score=174.50  Aligned_cols=131  Identities=22%  Similarity=0.355  Sum_probs=110.9

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-------
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-------  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-------  361 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||+++. .....+.+.+|++++.+++|+||+++++++.....       
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            45688889999999999999984 5799999999964 22334678999999999999999999999864321       


Q ss_pred             -cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 -LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 -~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       ......++||||+++|+|.+++... ...+++.....++.|+++||+|||   +.+|+||||||
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp  144 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKP  144 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCH
Confidence             1245789999999999999999753 345889999999999999999999   88999999997

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.80  E-value=1.8e-19  Score=173.89  Aligned_cols=129  Identities=24%  Similarity=0.365  Sum_probs=108.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS----AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|+||.||++.. .+++.||||.++...    ....+.+.+|++++.+++|+||+++++++...   +.
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~   80 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---EK   80 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---CC
Confidence            46788999999999999999985 568999999996422    23356899999999999999999999998532   34


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++||||++++ |.+++.......+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        81 ~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp  137 (305)
T 2wtk_C           81 QKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKP  137 (305)
T ss_dssp             -CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             CeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCc
Confidence            5789999999976 778776655667999999999999999999999   88999999997

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.80  E-value=8.6e-20  Score=179.20  Aligned_cols=127  Identities=22%  Similarity=0.397  Sum_probs=107.2

Q ss_pred             HHhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ...++|...+.||+|+||.||++. ..+|+.||||+++....  ...+.+.+|++++++++|+||+++++++.     ++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~  105 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-----HN  105 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE-----ET
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe-----cC
Confidence            345678999999999999999998 45789999999974332  22456789999999999999999999997     46


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||++ |+|.+++...  ..+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       106 ~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp  160 (329)
T 3gbz_A          106 HRLHLIFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKP  160 (329)
T ss_dssp             TEEEEEEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CEEEEEEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCH
Confidence            67899999998 6999999654  35999999999999999999999   88999999997

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.80  E-value=1.9e-19  Score=176.20  Aligned_cols=127  Identities=31%  Similarity=0.506  Sum_probs=107.1

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCe--eEEeeecCC-CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSE--VALKRFKNC-SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~--VAVK~l~~~-~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||++.. .+|..  ||||.++.. .....+.+.+|++++.++ +||||+++++++.     +.+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~   99 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRG   99 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-----ETT
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee-----eCC
Confidence            5688889999999999999985 35654  499998753 233456799999999999 8999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++....              ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp  170 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAA  170 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCcc
Confidence            7899999999999999997532              246999999999999999999999   89999999997

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.80  E-value=9e-20  Score=175.48  Aligned_cols=128  Identities=24%  Similarity=0.359  Sum_probs=96.3

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++.. .+++.||||++.... ....+++.+|++++.+++|+||+++++++.     ..+..
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   88 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV-----VKDEL   88 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE-----SSSCE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe-----ecCCc
Confidence            56788899999999999999985 478999999986432 233467899999999999999999999997     45678


Q ss_pred             EEEEecCCCCCHHHHHhc------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFA------SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~------~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++..      .....+++..+..++.||++||+|||   +.+|+||||||
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p  149 (303)
T 2vwi_A           89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKA  149 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSG
T ss_pred             EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCCh
Confidence            999999999999999864      12346999999999999999999999   88999999997

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.80  E-value=4.1e-20  Score=176.46  Aligned_cols=126  Identities=30%  Similarity=0.434  Sum_probs=107.6

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++|...+.||+|+||.||++.. +|+.||||.++...  ..+.|.+|++++.+++|+||+++++++..    ..+..++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~l   92 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYI   92 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCEE
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceEE
Confidence            35688889999999999999987 48899999997532  34679999999999999999999999763    3346799


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++.......+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  145 (278)
T 1byg_A           93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAA  145 (278)
T ss_dssp             EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCc
Confidence            999999999999997543334899999999999999999999   88999999997

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.80  E-value=1.3e-19  Score=172.14  Aligned_cols=126  Identities=24%  Similarity=0.339  Sum_probs=110.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.++... ....+.+.+|+.++.+++|+||+++++++.     +++..
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   80 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ   80 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-----cCCEE
Confidence            35688889999999999999985 478999999986432 234568899999999999999999999987     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+++++|.+++..  ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        81 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p  133 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKP  133 (276)
T ss_dssp             EEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCh
Confidence            999999999999998853  346999999999999999999999   88999999997

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.80  E-value=2.4e-19  Score=172.60  Aligned_cols=126  Identities=28%  Similarity=0.417  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||+++...  ....+.+.+|++++++++|+||+++++++.     .++..
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   77 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKL   77 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEe-----cCCce
Confidence            5788889999999999999985 478999999986432  223467899999999999999999999997     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ |+|.+++.......+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        78 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  131 (299)
T 2r3i_A           78 YLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKP  131 (299)
T ss_dssp             EEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             EEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCH
Confidence            99999998 79999997765567999999999999999999999   88999999997

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.80  E-value=1.5e-19  Score=173.81  Aligned_cols=124  Identities=37%  Similarity=0.570  Sum_probs=105.3

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||+|+..  ..||||.++...  ....+.|.+|++++++++|+||+++++++.      ....
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~~   94 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------APQL   94 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc------CCcc
Confidence            456888899999999999999864  369999997433  333468999999999999999999999863      4457


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++++|.+++... ...+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        95 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp  148 (289)
T 3og7_A           95 AIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKS  148 (289)
T ss_dssp             EEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCcc
Confidence            9999999999999999653 356999999999999999999999   88999999997

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.1e-19  Score=172.73  Aligned_cols=125  Identities=24%  Similarity=0.372  Sum_probs=105.6

Q ss_pred             cccceeecccCcccEEeeecC-CC---CeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLP-DG---SEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~-~g---~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      |...+.||+|+||.||+|... ++   ..||||.++.... ...+.|.+|++++++++|+||+++++++..    .+...
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~   98 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP----PEGLP   98 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSSCC
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec----CCCCc
Confidence            555689999999999999842 23   3799999975433 345789999999999999999999999874    23345


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+++|+|.+++.. ....+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        99 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp  152 (298)
T 3pls_A           99 HVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAA  152 (298)
T ss_dssp             EEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCc
Confidence            899999999999999965 3456899999999999999999999   88999999997

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.80  E-value=2.7e-19  Score=186.17  Aligned_cols=126  Identities=23%  Similarity=0.353  Sum_probs=108.2

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-------------cchHHHHHHHHHHhhCCCCcccceeeE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-------------AGDATFKHEVEVIASVRHVNLVALRGY  355 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-------------~~~~~f~~Ev~il~~l~H~NIV~l~g~  355 (425)
                      .++|...+.||+|+||.||++.. .+++.||||.++....             ...+++.+|+.++.+++|||||+++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            56788899999999999999985 4688999999974321             224678999999999999999999999


Q ss_pred             EeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.     ++...++||||+++|+|.+++...  ..+++..+..|+.||+.||+|||   +.+|+||||||
T Consensus       115 ~~-----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp  174 (504)
T 3q5i_A          115 FE-----DKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKP  174 (504)
T ss_dssp             EE-----CSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EE-----cCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcH
Confidence            97     566789999999999999998653  45999999999999999999999   88999999997

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.80  E-value=1.3e-19  Score=179.64  Aligned_cols=122  Identities=23%  Similarity=0.407  Sum_probs=106.6

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.++....    .+.+|++++.++ +||||+++++++.     +++..
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~~   91 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYD-----DGKYV   91 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEE-----CSSEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEE-----cCCEE
Confidence            45688889999999999999985 4689999999975432    345788888888 7999999999987     56788


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...  ..+++.....++.||++||+|||   +.+|+||||||
T Consensus        92 ~lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp  144 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKP  144 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCH
Confidence            9999999999999999653  46999999999999999999999   88999999997

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.80  E-value=1.5e-19  Score=178.00  Aligned_cols=126  Identities=20%  Similarity=0.331  Sum_probs=109.7

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+++.||+|.+...   .....+.+.+|+.++.+++|+||+++++++.     +.+
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~  114 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DND  114 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCC
Confidence            35678889999999999999985 45889999998643   2233567899999999999999999999997     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++...  ..+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp  169 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKL  169 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             eEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCc
Confidence            789999999999999988643  46999999999999999999999   88999999997

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.80  E-value=1.6e-19  Score=176.22  Aligned_cols=125  Identities=21%  Similarity=0.376  Sum_probs=105.1

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--------cchHHHHHHHHHHhhCCCCcccceeeEEeecc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--------AGDATFKHEVEVIASVRHVNLVALRGYCIATT  360 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~  360 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.+.....        .....+.+|++++.+++|+||+++++++..  
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--   86 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--   86 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence            35688889999999999999984 5689999999864321        122468899999999999999999999852  


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          +..++||||+++|+|.+++..  ...+++.....++.||++||+|||   +.+|+||||||
T Consensus        87 ----~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp  142 (322)
T 2ycf_A           87 ----EDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKP  142 (322)
T ss_dssp             ----SSEEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             ----CceEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence                237999999999999999854  356999999999999999999999   88999999997

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.80  E-value=1.6e-19  Score=172.50  Aligned_cols=126  Identities=24%  Similarity=0.349  Sum_probs=107.5

Q ss_pred             hcCcccceeecccCcccEEeeecCC----CCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPD----GSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~----g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|+||.||+|...+    +..||||.++... ....+.|.+|++++++++||||+++++++.      .
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~   84 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------E   84 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC------S
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc------C
Confidence            4568888999999999999998432    3469999997543 334578999999999999999999999974      3


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++++|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        85 ~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp  141 (281)
T 3cc6_A           85 EPTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAV  141 (281)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSG
T ss_pred             CCCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCcc
Confidence            3468999999999999999653 345999999999999999999999   89999999997

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.80  E-value=1.9e-19  Score=186.06  Aligned_cols=125  Identities=21%  Similarity=0.406  Sum_probs=110.4

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||++....   ....+.+.+|++++.+++|||||++++++.     +.+.
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~  100 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-----DKGY  100 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eCCE
Confidence            4588889999999999999985 478999999996432   234578999999999999999999999997     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....|+.||++||+|||   +.+|+||||||
T Consensus       101 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp  154 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKP  154 (484)
T ss_dssp             EEEEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCH
Confidence            89999999999999999653  46999999999999999999999   88999999997

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.80  E-value=2.1e-19  Score=186.51  Aligned_cols=126  Identities=25%  Similarity=0.395  Sum_probs=106.6

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .+.|...+.||+|+||.||++.. .++..||||.++...  ......+.+|+.++++++|||||++++++.     ....
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~  110 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-----DKRN  110 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence            34588889999999999999985 478999999997532  333568999999999999999999999997     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....|+.||++||+|||   +.+|+||||||
T Consensus       111 ~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp  164 (494)
T 3lij_A          111 YYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKP  164 (494)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCh
Confidence            89999999999999988653  45999999999999999999999   88999999997

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.80  E-value=2.1e-19  Score=177.47  Aligned_cols=125  Identities=20%  Similarity=0.227  Sum_probs=109.1

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCC--CcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRH--VNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H--~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++...+++.||||++....  ....+.|.+|++++.+++|  +||+++++++.     .++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-----~~~   82 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TDQ   82 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-----eCC
Confidence            34578889999999999999998889999999987432  3334689999999999986  99999999997     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||| +.+|+|.+++...  ..+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        83 ~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp  136 (343)
T 3dbq_A           83 YIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKP  136 (343)
T ss_dssp             EEEEEEC-CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             EEEEEEe-CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCc
Confidence            7899999 5679999999753  46999999999999999999999   88999999997

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.80  E-value=1.3e-19  Score=178.80  Aligned_cols=126  Identities=22%  Similarity=0.361  Sum_probs=109.2

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc--------cchHHHHHHHHHHhhCCCCcccceeeEEeecc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA--------AGDATFKHEVEVIASVRHVNLVALRGYCIATT  360 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~--------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~  360 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||+++....        ...+.+.+|++++.+++|+||+++++++.   
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~---   99 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE---   99 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE---
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe---
Confidence            4578889999999999999998 46789999999975421        12346788999999999999999999997   


Q ss_pred             ccCCceEEEEEecCCCC-CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNG-SVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~G-sL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        +.+..++||||+.+| +|.+++...  ..+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       100 --~~~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp  158 (335)
T 3dls_A          100 --NQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKD  158 (335)
T ss_dssp             --CSSEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             --eCCEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCH
Confidence              566789999999877 999998643  46999999999999999999999   88999999997

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.79  E-value=1.4e-19  Score=193.89  Aligned_cols=118  Identities=23%  Similarity=0.354  Sum_probs=102.7

Q ss_pred             eeecccCcccEEeeec---CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLL---PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l---~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||.||+|.+   .+++.||||+++...  ....++|.+|+++|.+++|+|||++++++.      .+..++||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~  448 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM  448 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence            5799999999999964   346789999997532  233578999999999999999999999985      23478999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||++|+|.+++...  ..++|..+..|+.||++||+|||   +.+||||||||
T Consensus       449 E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp  497 (635)
T 4fl3_A          449 EMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAA  497 (635)
T ss_dssp             ECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCCh
Confidence            999999999999653  46999999999999999999999   88999999997

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.79  E-value=2.4e-19  Score=181.48  Aligned_cols=126  Identities=18%  Similarity=0.267  Sum_probs=103.4

Q ss_pred             cCcccc-eeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhh-CCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRD-NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIAS-VRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~-~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~-l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|... ++||+|+||+||++.. .+|+.||||+++.     ...+.+|++++.+ .+|+||+++++++..... +....
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~-~~~~~  134 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA-GRKCL  134 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET-TEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeeccc-CCcEE
Confidence            345544 6899999999999984 5689999999964     2467889988754 589999999998863211 24567


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++.......+++..+..|+.||++||+|||   +.+||||||||
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp  189 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP  189 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCc
Confidence            99999999999999998755557999999999999999999999   88999999997

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.79  E-value=1.9e-19  Score=183.78  Aligned_cols=130  Identities=21%  Similarity=0.315  Sum_probs=110.8

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||+++...  ....+.+.+|++++++++|+||+++++++..........
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46788999999999999999984 568899999997532  233468899999999999999999999987543223367


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||++ |+|.+++..  ...+++.....|+.||++||+|||   +.+|+||||||
T Consensus       105 ~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp  157 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKP  157 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCH
Confidence            899999997 699999964  346999999999999999999999   88999999997

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.79  E-value=1.4e-19  Score=180.42  Aligned_cols=126  Identities=21%  Similarity=0.220  Sum_probs=109.6

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|+||.||+++.. +|+.||||+++...   ....+.+..|..++..+ +|+||+++++++.     ..
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-----~~   93 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-----TM   93 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE-----CS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE-----cC
Confidence            567899999999999999999864 58899999997421   23346788999999988 7999999999987     45


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp  149 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKL  149 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCH
Confidence            6789999999999999999653  35999999999999999999999   88999999997

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.79  E-value=3.8e-19  Score=171.04  Aligned_cols=126  Identities=27%  Similarity=0.355  Sum_probs=109.7

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---------cchHHHHHHHHHHhhCC-CCcccceeeEEee
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---------AGDATFKHEVEVIASVR-HVNLVALRGYCIA  358 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---------~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~  358 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||.++....         ...+.+.+|++++.+++ |+||+++++++. 
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-   94 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-   94 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE-
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec-
Confidence            46788899999999999999985 4689999999975321         12356889999999996 999999999987 


Q ss_pred             ccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       359 ~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                          ..+..++||||+++++|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus        95 ----~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  152 (298)
T 1phk_A           95 ----TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKP  152 (298)
T ss_dssp             ----CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ----cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCc
Confidence                567789999999999999999653  46999999999999999999999   88999999997

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.79  E-value=5.5e-19  Score=173.00  Aligned_cols=126  Identities=33%  Similarity=0.450  Sum_probs=103.0

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHH--hhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVI--ASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il--~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||+|+. +++.||||+++..   ....+..|.+++  ..++|+||+++++.+...........
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            45788889999999999999987 6899999999642   234555555554  45899999999987654333344567


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP---------AIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~---------~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...   ..+|..+..|+.||++||+|||   +.         +||||||||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp  148 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNS  148 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSG
T ss_pred             EEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeeccccc
Confidence            8999999999999999653   3589999999999999999999   66         999999997

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.79  E-value=4.1e-19  Score=171.71  Aligned_cols=126  Identities=18%  Similarity=0.279  Sum_probs=106.7

Q ss_pred             cCcccc-eeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHH-hhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRD-NIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVI-ASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~-~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il-~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|... ++||+|+||.||++.. .+|+.||||+++.     ...+.+|++++ ...+|+||+++++++..... .....
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~~   90 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA-GRKCL   90 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET-TEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC-CCceE
Confidence            445555 7899999999999984 5789999999964     24678899888 55689999999999864211 24567


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++.......+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp  145 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP  145 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCH
Confidence            99999999999999998766567999999999999999999999   89999999997

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.79  E-value=3e-19  Score=187.71  Aligned_cols=127  Identities=24%  Similarity=0.355  Sum_probs=110.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...++||+|+||.||+++. .+|+.||||++....   ....+.+.+|++++.+++|||||++++++.     ....
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-----~~~~  259 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE-----TKTD  259 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-----eCCE
Confidence            5688889999999999999985 469999999996422   223467899999999999999999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASN--GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~--~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++....  ...+++.....++.||+.||+|||   +.+||||||||
T Consensus       260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP  317 (543)
T 3c4z_A          260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKP  317 (543)
T ss_dssp             EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCCh
Confidence            899999999999999997643  456999999999999999999999   88999999997

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.79  E-value=2.5e-19  Score=175.76  Aligned_cols=129  Identities=20%  Similarity=0.275  Sum_probs=110.2

Q ss_pred             HhcCcccc-eeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccC
Q 048791          289 ATRNFSRD-NIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLE  363 (425)
Q Consensus       289 at~~f~~~-~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~  363 (425)
                      ..+.|... +.||+|+||.||++.. .+|+.||||+++..  ......++.+|+.++.+++ |+||+++++++.     +
T Consensus        26 ~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~-----~  100 (327)
T 3lm5_A           26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE-----N  100 (327)
T ss_dssp             HHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----C
T ss_pred             hhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE-----e
Confidence            34455555 8899999999999985 46999999999743  2333578999999999995 699999999987     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..++||||+++|+|.+++.......+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp  159 (327)
T 3lm5_A          101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKP  159 (327)
T ss_dssp             SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCh
Confidence            667899999999999999987655567999999999999999999999   88999999997

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.79  E-value=1.9e-19  Score=179.16  Aligned_cols=130  Identities=16%  Similarity=0.210  Sum_probs=105.0

Q ss_pred             hcCcccceeecccCcccEEeeecCC------CCeeEEeeecCCCccc-----------hHHHHHHHHHHhhCCCCcccce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPD------GSEVALKRFKNCSAAG-----------DATFKHEVEVIASVRHVNLVAL  352 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~------g~~VAVK~l~~~~~~~-----------~~~f~~Ev~il~~l~H~NIV~l  352 (425)
                      .++|...+.||+|+||.||+|...+      ++.||||++.......           ...+..|+..+.+++|+||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            4578889999999999999998643      4789999987543211           1234556677788899999999


Q ss_pred             eeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          353 RGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       353 ~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++..... .....+|||||+ +|+|.+++... ...++|..+..|+.||++||+|||   +.+||||||||
T Consensus       114 ~~~~~~~~~-~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp  180 (364)
T 3op5_A          114 WGSGLHDKN-GKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKA  180 (364)
T ss_dssp             EEEEEEEET-TEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EeeeeeccC-CcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCH
Confidence            999975422 234679999999 99999999763 356999999999999999999999   88999999997

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.79  E-value=1.5e-19  Score=179.01  Aligned_cols=125  Identities=18%  Similarity=0.298  Sum_probs=108.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++....   ......+.+|+++++.++||||+++++++.     ..+
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~   82 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-----TPT   82 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCC
Confidence            35788889999999999999994 678999999986421   122357899999999999999999999997     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+ +|+|.+++...  ..+++.....++.||++||.|||   +.+|+||||||
T Consensus        83 ~~~lv~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp  136 (336)
T 3h4j_B           83 DIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKP  136 (336)
T ss_dssp             EEEEEECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCST
T ss_pred             EEEEEEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCch
Confidence            789999999 68999998653  35999999999999999999999   88999999997

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.79  E-value=2.4e-19  Score=170.53  Aligned_cols=125  Identities=18%  Similarity=0.314  Sum_probs=109.6

Q ss_pred             cCcccceeecccCcccEEeeecC-CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++... +|+.||||.+....   ....+.+.+|++++++++|+||+++++++.     ..+.
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   85 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-----TPTD   85 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cCCe
Confidence            56888899999999999999854 79999999986422   223467899999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++++|.+++...  ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  139 (276)
T 2h6d_A           86 FFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKP  139 (276)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCG
T ss_pred             EEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCh
Confidence            89999999999999999653  35899999999999999999999   88999999997

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.79  E-value=3.1e-19  Score=173.61  Aligned_cols=126  Identities=20%  Similarity=0.245  Sum_probs=110.2

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+++.||||.++....   ...+.+.+|+.++.+++|+||+++++++.     .++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGE-----IDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe-----eCC
Confidence            46789999999999999999985 4789999999975322   22367899999999999999999999987     456


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|+||+++++|.+++...  ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp  162 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKP  162 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             eEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCCh
Confidence            789999999999999999653  35999999999999999999999   88999999997

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.79  E-value=3.8e-19  Score=174.68  Aligned_cols=126  Identities=28%  Similarity=0.536  Sum_probs=107.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCee----EEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEV----ALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~V----AVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      .++|...+.||+|+||.||+|.. .+++.|    |+|.+... .....+++.+|+.++.+++|+||+++++++..     
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-----   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence            35688889999999999999984 456554    77777543 33446789999999999999999999999963     


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +..++|+||+++|+|.+++... ...+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        89 -~~~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp  145 (327)
T 3lzb_A           89 -STVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAA  145 (327)
T ss_dssp             -SSEEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             -CCceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCH
Confidence             3478999999999999999764 346999999999999999999999   88999999997

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.79  E-value=2.1e-19  Score=178.17  Aligned_cols=125  Identities=23%  Similarity=0.335  Sum_probs=109.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++.. .+|+.||+|+++... ....+.+.+|+.++.+++|+||+++++++.     .++..+
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~  107 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEIS  107 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE-----ETTEEE
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEE-----ECCEEE
Confidence            4688889999999999999985 478999999997543 333567999999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP-AIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~-~IiHRDLKp  425 (425)
                      +||||+++|+|.+++...  ..+++..+..|+.++++||+|||   +. +|+||||||
T Consensus       108 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp  160 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKP  160 (360)
T ss_dssp             EEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSG
T ss_pred             EEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccH
Confidence            999999999999999653  35899999999999999999999   64 899999997

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.79  E-value=3e-19  Score=170.90  Aligned_cols=125  Identities=22%  Similarity=0.408  Sum_probs=108.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++.. .+++.||||.+....   ....+.+.+|++++.+++|+||+++++++.     +++.
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   88 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-----DRKR   88 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-----cCCE
Confidence            5688889999999999999985 468899999986421   122467899999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|+++||+|||   +.+|+||||||
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p  142 (284)
T 2vgo_A           89 IYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKP  142 (284)
T ss_dssp             EEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSG
T ss_pred             EEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCH
Confidence            89999999999999999653  35899999999999999999999   89999999997

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.1e-19  Score=180.74  Aligned_cols=126  Identities=24%  Similarity=0.308  Sum_probs=108.9

Q ss_pred             hcCcccceeecccCcccEEeeec----CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS----AAGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      .++|...+.||+|+||.||++..    .+|+.||||+++...    ....+.+.+|++++.++ +|+||+++++++.   
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---  129 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ---  129 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE---
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe---
Confidence            35788899999999999999985    478999999986422    12345678899999999 6999999999987   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        ..+..++||||+++|+|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus       130 --~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp  187 (355)
T 1vzo_A          130 --TETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKL  187 (355)
T ss_dssp             --ETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             --eCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence              456789999999999999999653  35999999999999999999999   88999999997

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.79  E-value=4e-19  Score=179.11  Aligned_cols=124  Identities=20%  Similarity=0.228  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCC--CCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVR--HVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~--H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||++...+++.||||++....  ....+.|.+|++++.+++  |+|||++++++.     ..+.
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-----~~~~  130 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TDQY  130 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-----cCCE
Confidence            4588889999999999999998789999999986432  334578999999999996  599999999987     4567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||| +.+++|.+++...  ..+++..+..|+.||++||+|||   +.+||||||||
T Consensus       131 ~~lv~E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp  183 (390)
T 2zmd_A          131 IYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKP  183 (390)
T ss_dssp             EEEEEE-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCG
T ss_pred             EEEEEe-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCH
Confidence            899999 5679999999764  36899999999999999999999   89999999997

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.79  E-value=2.7e-19  Score=185.23  Aligned_cols=125  Identities=24%  Similarity=0.389  Sum_probs=110.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||++...  .......+.+|++++.+++|||||++++++.     .....
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~   96 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DSSSF   96 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-----cCCEE
Confidence            4588889999999999999985 47899999998632  2233568899999999999999999999997     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++...  ..+++.....|+.||++||.|||   +.+||||||||
T Consensus        97 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp  149 (486)
T 3mwu_A           97 YIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKP  149 (486)
T ss_dssp             EEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCch
Confidence            9999999999999988653  36999999999999999999999   88999999997

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.79  E-value=4e-19  Score=173.32  Aligned_cols=132  Identities=23%  Similarity=0.334  Sum_probs=110.8

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccc---cCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQ---LEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~---~~~  364 (425)
                      ..+|...+.||+|+||.||+++. .+|+.||||++........+.+.+|+.++.+++ |+||+++++++.....   ...
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            34688889999999999999984 578999999997655555678999999999996 9999999999853221   134


Q ss_pred             ceEEEEEecCCCCCHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFA-SNGPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~-~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                      ...++|+||++ |+|.+++.. .....++|..+..|+.||++||+|||   +.+  |+||||||
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp  166 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKV  166 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCG
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCc
Confidence            56799999996 899998865 23446999999999999999999999   777  99999997

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.79  E-value=7.8e-19  Score=168.67  Aligned_cols=123  Identities=23%  Similarity=0.313  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++. ..+|+.||||++....  ..+.+.+|+.++.++ +|+|++++++++.     ++...+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~~~~   82 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-----EGLHNV   82 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-----ETTEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCceeE
Confidence            568888999999999999998 4679999999986432  234688999999999 7999999999986     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+ +++|.+++... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        83 lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp  134 (298)
T 1csn_A           83 LVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKP  134 (298)
T ss_dssp             EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCG
T ss_pred             EEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCH
Confidence            999999 99999999754 345999999999999999999999   89999999997

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.79  E-value=3.7e-19  Score=174.52  Aligned_cols=125  Identities=25%  Similarity=0.413  Sum_probs=108.4

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc--cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA--AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~--~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||++.....  ...+.+.+|++++.+++|+||+++++++.     +++..
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~   99 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KKKRW   99 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cCCEE
Confidence            5688889999999999999985 4589999999865332  22456889999999999999999999997     46678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++++|.+++..  ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus       100 ~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp  152 (331)
T 4aaa_A          100 YLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKP  152 (331)
T ss_dssp             EEEEECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             EEEEecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcCh
Confidence            999999999999887653  245999999999999999999999   88999999997

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=6.6e-19  Score=172.16  Aligned_cols=126  Identities=33%  Similarity=0.479  Sum_probs=105.7

Q ss_pred             HhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhC--CCCcccceeeEEeeccccCCce
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV--RHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l--~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ..++|...+.||+|+||.||+|+.. |+.||||++...   ....+..|.+++..+  +|+||+++++++..... ....
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~  109 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG-SWTQ  109 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG-GGCE
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC-CCCc
Confidence            3567999999999999999999974 899999998642   234566677777665  89999999999875322 1267


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP--------AIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~--------~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...   .+++..+..|+.|+++||+|||   ..        +||||||||
T Consensus       110 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp  170 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKS  170 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCG
T ss_pred             eEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccch
Confidence            89999999999999999653   5999999999999999999999   55        999999997

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.78  E-value=1.8e-19  Score=176.49  Aligned_cols=125  Identities=25%  Similarity=0.387  Sum_probs=105.7

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCcc-chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAA-GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~-~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||+++..... ....+.+|++++.+++|+||+++++++.     .++..+
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-----CSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-----eCCEEE
Confidence            4688889999999999999985 47899999999743322 2235668999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||++ |+|.+++... ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus        77 lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp  128 (324)
T 3mtl_A           77 LVFEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKP  128 (324)
T ss_dssp             EEEECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCG
T ss_pred             EEecccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCH
Confidence            9999998 6999998764 346999999999999999999999   88999999997

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.78  E-value=1.6e-19  Score=178.86  Aligned_cols=122  Identities=18%  Similarity=0.190  Sum_probs=104.8

Q ss_pred             cCcccceeecccCcccEEeeecC---------CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccc----------
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP---------DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA----------  351 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~---------~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~----------  351 (425)
                      ++|...+.||+|+||.||++...         +++.||||.+...     +.+.+|++++.+++|+||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            57888899999999999999854         3889999999753     46889999999999999998          


Q ss_pred             -----eeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          352 -----LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       352 -----l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                           +++++..    ++...++||||+ +|+|.+++.......+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       117 ~~i~~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp  187 (352)
T 2jii_A          117 LAIPTCMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTA  187 (352)
T ss_dssp             CSCCCCCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCG
T ss_pred             cCccchhhcccc----CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCH
Confidence                 5666653    356889999999 999999997654467999999999999999999999   88999999997

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.78  E-value=2e-20  Score=183.94  Aligned_cols=129  Identities=19%  Similarity=0.218  Sum_probs=102.9

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--------ccchHHHHHHHHHHhhCC---------CCccccee
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--------AAGDATFKHEVEVIASVR---------HVNLVALR  353 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--------~~~~~~f~~Ev~il~~l~---------H~NIV~l~  353 (425)
                      ++|...+.||+|+||.||+++. +|+.||||+++...        ....+.+.+|+.++++++         |+|||++.
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            4577789999999999999987 78999999997532        122367899999999886         77777777


Q ss_pred             eEEeeccc-------------------------cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Q 048791          354 GYCIATTQ-------------------------LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA  408 (425)
Q Consensus       354 g~~~~~~~-------------------------~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~  408 (425)
                      +.+.....                         .+.+..++||||+++|++.+.+..   ..+++.....|+.||++||+
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHH
Confidence            76532110                         025678999999999987777633   46899999999999999999


Q ss_pred             HHhcCCCCCeeecCCCC
Q 048791          409 YLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       409 YLH~~~~~~IiHRDLKp  425 (425)
                      |||  .+.+||||||||
T Consensus       176 ~lH--~~~~ivHrDlKp  190 (336)
T 2vuw_A          176 VAE--ASLRFEHRDLHW  190 (336)
T ss_dssp             HHH--HHHCCBCSCCCG
T ss_pred             HHH--HhCCEeECCCCH
Confidence            999  247899999997

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.78  E-value=5.2e-19  Score=172.29  Aligned_cols=133  Identities=26%  Similarity=0.365  Sum_probs=109.9

Q ss_pred             HhcCcccceeecccCcccEEeeec--CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhC---CCCcccceeeEEeeccc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL--PDGSEVALKRFKNCS--AAGDATFKHEVEVIASV---RHVNLVALRGYCIATTQ  361 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l--~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l---~H~NIV~l~g~~~~~~~  361 (425)
                      +.++|...+.||+|+||.||++..  .+|+.||||+++...  ......+.+|+.++.++   +|+||+++++++.....
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457789999999999999999985  468899999986322  22234677888877766   89999999999874322


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ......++||||++ |+|.+++.......+++..+..++.||++||+|||   +.+|+||||||
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp  148 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKP  148 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCH
Confidence            23457899999998 79999998765566999999999999999999999   88999999997

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.78  E-value=6.5e-19  Score=175.85  Aligned_cols=132  Identities=24%  Similarity=0.358  Sum_probs=112.5

Q ss_pred             HHHHHHhcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCcc--------chHHHHHHHHHHhhC-CCCccccee
Q 048791          284 DDIKKATRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAA--------GDATFKHEVEVIASV-RHVNLVALR  353 (425)
Q Consensus       284 ~ei~~at~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~--------~~~~f~~Ev~il~~l-~H~NIV~l~  353 (425)
                      .......++|...+.||+|+||.||++... +|+.||||++......        ..+.+.+|++++.++ +|+||++++
T Consensus        87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            334445667999999999999999999864 7999999998653311        134678999999999 799999999


Q ss_pred             eEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          354 GYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       354 g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++.     .....++||||+++|+|.+++...  ..+++..+..|+.||++||.|||   +.+|+||||||
T Consensus       167 ~~~~-----~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp  228 (365)
T 2y7j_A          167 DSYE-----SSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKP  228 (365)
T ss_dssp             EEEE-----BSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEe-----eCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            9987     466789999999999999999653  46999999999999999999999   88999999997

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.78  E-value=6e-19  Score=173.95  Aligned_cols=129  Identities=22%  Similarity=0.324  Sum_probs=110.1

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||+++.... .....+.+|++++++++|+||+++++++...........
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46788899999999999999985 4689999999975332 334678899999999999999999999865332234678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||++ |+|.+++..   ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp  140 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKP  140 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            99999997 799999865   35999999999999999999999   88999999997

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.78  E-value=4.7e-19  Score=176.97  Aligned_cols=130  Identities=24%  Similarity=0.326  Sum_probs=109.1

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC--------CCcccceeeEEeecc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR--------HVNLVALRGYCIATT  360 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~--------H~NIV~l~g~~~~~~  360 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||+++.. ....+.+.+|++++.+++        |+||+++++++....
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            3678999999999999999998 457899999999753 334567899999999986        788999999986432


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP-AIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~-~IiHRDLKp  425 (425)
                      . .+...++||||+ +|++.+++.......+++..+..|+.||++||+|||   +. +||||||||
T Consensus       115 ~-~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp  175 (397)
T 1wak_A          115 V-NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKP  175 (397)
T ss_dssp             T-TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSG
T ss_pred             C-CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCH
Confidence            2 345789999999 577777776655567999999999999999999999   76 999999997

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.78  E-value=7.1e-19  Score=170.61  Aligned_cols=125  Identities=29%  Similarity=0.373  Sum_probs=105.2

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++... +|+.||||.+....  ..+++.+|++++.+++|+||+++++++.     ..+..+
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~  100 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF-----KNTDLW  100 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEEE
Confidence            457888999999999999999854 68999999997532  3467899999999999999999999997     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++... ...+++..+..++.++++||.|||   +.+|+||||||
T Consensus       101 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p  153 (314)
T 3com_A          101 IVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKA  153 (314)
T ss_dssp             EEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCH
Confidence            999999999999998632 346999999999999999999999   88999999997

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.78  E-value=2.3e-19  Score=193.55  Aligned_cols=128  Identities=23%  Similarity=0.287  Sum_probs=106.5

Q ss_pred             cCcccceeecccCcccEEeeecC--CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP--DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~--~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||.||++...  +|+.||||++.... ....+.|.+|++++.+++|||||++++++...........
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            67889999999999999999853  68999999986432 3344678999999999999999999999986443222236


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||||+++++|.+++..    .++|..++.|+.||++||+|||   +.+||||||||
T Consensus       160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp  210 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKP  210 (681)
T ss_dssp             EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccCh
Confidence            999999999999987743    6999999999999999999999   88999999997

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=3.2e-19  Score=176.34  Aligned_cols=128  Identities=24%  Similarity=0.340  Sum_probs=102.7

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCcc-----chHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAA-----GDATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~-----~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      ...++|...+.||+|+||.||++.. .+|+.||||+++.....     ..+.+.+|++++.+++|+||+++++++.    
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----   82 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG----   82 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC----
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe----
Confidence            3456788999999999999999985 46899999999743211     1247889999999999999999999986    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       ..+..++||||+++ +|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        83 -~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp  140 (346)
T 1ua2_A           83 -HKSNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKP  140 (346)
T ss_dssp             -CTTCCEEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             -eCCceEEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCH
Confidence             45678999999985 898888543 346899999999999999999999   88999999997

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.78  E-value=6.4e-19  Score=169.40  Aligned_cols=124  Identities=22%  Similarity=0.351  Sum_probs=104.6

Q ss_pred             cCcccce-eecccCcccEEeeec---CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDN-IIGRGGYGNVYKGLL---PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~-~IG~G~fG~Vykg~l---~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ++|...+ .||+|+||.||+|..   .+++.||||+++...  ....++|.+|++++.+++|+||+++++++.      .
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~   89 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------A   89 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------S
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------C
Confidence            4456666 899999999999953   347889999997533  223468999999999999999999999983      3


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++++|.+++...  ..+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        90 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp  145 (291)
T 1xbb_A           90 ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAA  145 (291)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             CCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCc
Confidence            4579999999999999999753  45999999999999999999999   88999999997

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.78  E-value=8.5e-19  Score=174.50  Aligned_cols=129  Identities=26%  Similarity=0.357  Sum_probs=110.3

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||++.. .+++.||||++..... ...+.+.+|++++.+++|+||+++++++...........
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            45788999999999999999984 4788999999975332 334678999999999999999999999875443234578


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||++ |+|.+++...   .+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp  156 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKP  156 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCh
Confidence            99999998 6999998653   5999999999999999999999   88999999997

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.78  E-value=1.6e-18  Score=169.99  Aligned_cols=131  Identities=31%  Similarity=0.480  Sum_probs=109.9

Q ss_pred             HHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhh--CCCCcccceeeEEeeccccCC
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIAS--VRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~--l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      ....++|...+.||+|+||.||+++. +|+.||||++..   .....+.+|.+++..  ++|+||+++++++..... ..
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~-~~  112 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TW  112 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS-SC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC-cc
Confidence            34456799999999999999999997 589999999964   234678889999987  789999999999874321 12


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGA-----QPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~-----~~~IiHRDLKp  425 (425)
                      ...++||||+++|+|.+++...   .++|..+..++.|+++||+|||...     +.+|+||||||
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp  175 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS  175 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSG
T ss_pred             ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCH
Confidence            3789999999999999999653   5999999999999999999999321     57999999997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.78  E-value=8.8e-19  Score=168.09  Aligned_cols=126  Identities=25%  Similarity=0.394  Sum_probs=110.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+++.||||++....  ....+.+.+|++++++++|+||+++++++.     +.+.
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   95 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DSSS   95 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-----CCCe
Confidence            45688899999999999999985 478999999986432  234568999999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|+||+++++|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p  149 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKP  149 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCh
Confidence            89999999999999988653  35999999999999999999999   88999999997

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.78  E-value=2.7e-19  Score=179.67  Aligned_cols=126  Identities=25%  Similarity=0.325  Sum_probs=100.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHH-HhhCCCCcccceeeEEeeccccCC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEV-IASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~i-l~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .++|...+.||+|+||.||+++. .+++.||||+++...   ......+.+|..+ ++.++|+|||++++++.     ..
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~-----~~  111 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-----TA  111 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE-----CS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-----eC
Confidence            35688899999999999999985 468899999997532   2233466777776 56789999999999987     56


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus       112 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp  167 (373)
T 2r5t_A          112 DKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKP  167 (373)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCH
Confidence            6789999999999999999653  35899999999999999999999   89999999997

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.78  E-value=1.2e-18  Score=170.30  Aligned_cols=121  Identities=20%  Similarity=0.349  Sum_probs=106.8

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||.||++. ..+++.||||+++..   ..+.+.+|++++.+++ |+||+++++++...   .....+
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---~~~~~~  109 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDP---VSRTPA  109 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT---TTCCEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccC---CCCceE
Confidence            568888999999999999997 467899999999743   3467899999999997 99999999998742   255689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++++|.+++.     .+++..+..++.||++||+|||   +.+|+||||||
T Consensus       110 lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp  158 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKP  158 (330)
T ss_dssp             EEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCH
Confidence            9999999999999883     3899999999999999999999   88999999997

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.78  E-value=9.5e-19  Score=175.62  Aligned_cols=127  Identities=24%  Similarity=0.374  Sum_probs=101.6

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~  364 (425)
                      ..++|...+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.++.+++ |+||+++++++...   +.
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~~   83 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---ND   83 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---TS
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---CC
Confidence            35678999999999999999998 457999999999643  2333467889999999997 99999999998742   23


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ...++|||||+ |+|.+++..   ..+++..+..++.||++||+|||   +.+||||||||
T Consensus        84 ~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp  137 (388)
T 3oz6_A           84 RDVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKP  137 (388)
T ss_dssp             SCEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             CEEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCH
Confidence            46899999998 799999865   36999999999999999999999   88999999997

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.77  E-value=6.8e-19  Score=181.63  Aligned_cols=128  Identities=21%  Similarity=0.293  Sum_probs=107.1

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||++...  .....+.+.+|+.++++++|+|||++++++...... +..
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            4678889999999999999997 457899999999753  223346788999999999999999999998754321 335


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|||||++ +|.+.+..    .+++..+..++.||++||+|||   +.+||||||||
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp  192 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  192 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCh
Confidence            77999999985 57676632    4899999999999999999999   88999999997

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.77  E-value=1.2e-19  Score=181.76  Aligned_cols=132  Identities=14%  Similarity=0.173  Sum_probs=102.1

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHH---HHHhhCCCCccccee-------eE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEV---EVIASVRHVNLVALR-------GY  355 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev---~il~~l~H~NIV~l~-------g~  355 (425)
                      .++|...+.||+|+||.||+|.. .+|+.||||+++..   .....+.|.+|+   +++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46788889999999999999995 57999999999742   233457889999   556666899999998       44


Q ss_pred             Eeeccc-------cCCc-----eEEEEEecCCCCCHHHHHhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 048791          356 CIATTQ-------LEGH-----QRIIVCDLMKNGSVYDHLFASN-----GPKLSWPLRQSIALGTARGLAYLHFGAQPAI  418 (425)
Q Consensus       356 ~~~~~~-------~~~~-----~~~LV~Ey~~~GsL~~~L~~~~-----~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~I  418 (425)
                      +.....       .+++     ..++||||+ +|+|.+++....     ...++|..+..|+.||++||+|||   +.+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence            432110       0000     378999999 689999997521     223557899999999999999999   8899


Q ss_pred             eecCCCC
Q 048791          419 FHRDIKA  425 (425)
Q Consensus       419 iHRDLKp  425 (425)
                      |||||||
T Consensus       228 vHrDikp  234 (377)
T 3byv_A          228 VHTYLRP  234 (377)
T ss_dssp             ECSCCCG
T ss_pred             ecCCCCH
Confidence            9999997

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.77  E-value=6.9e-19  Score=168.39  Aligned_cols=127  Identities=23%  Similarity=0.295  Sum_probs=103.0

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-cchH-HHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-AGDA-TFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-~~~~-~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||+++.... .... .+..|...++.++|+||+++++++.     +++.
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~~   80 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REGD   80 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSS
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccCC
Confidence            45688889999999999999984 6799999999975322 2223 3444555688889999999999997     4567


Q ss_pred             EEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQP-AIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~-~IiHRDLKp  425 (425)
                      .++||||++ |+|.+++..  .....+++..+..|+.|+++||+|||   +. +|+||||||
T Consensus        81 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp  138 (290)
T 3fme_A           81 VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKP  138 (290)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSG
T ss_pred             EEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCH
Confidence            899999998 698888754  23457999999999999999999999   66 999999997

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.77  E-value=1.5e-18  Score=171.48  Aligned_cols=131  Identities=24%  Similarity=0.342  Sum_probs=107.9

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc---cC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ---LE  363 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~---~~  363 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++....  ......+.+|++++.+++|+||+++++++.....   ..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            35688889999999999999985 579999999986432  2234678899999999999999999999875321   11


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++..++||||++ |+|.+.+... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        96 ~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp  152 (351)
T 3mi9_A           96 KGSIYLVFDFCE-HDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKA  152 (351)
T ss_dssp             -CEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             CceEEEEEeccC-CCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCH
Confidence            456899999998 5888887653 345999999999999999999999   88999999997

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.77  E-value=6.1e-19  Score=168.84  Aligned_cols=125  Identities=28%  Similarity=0.421  Sum_probs=99.6

Q ss_pred             cCcccceeecccCcccEEeeec--CCCC--eeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL--PDGS--EVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l--~~g~--~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||+|..  .+++  .||||.++...   ....+.|.+|++++.+++|+||+++++++..     
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----   92 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-----   92 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc-----
Confidence            4688889999999999999984  2333  68999987532   2345689999999999999999999999863     


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       ...++|+||+++|+|.+++... ...+++..+..++.|+++||+|||   +.+|+||||||
T Consensus        93 -~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp  149 (291)
T 1u46_A           93 -PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAA  149 (291)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             -CCceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCch
Confidence             2378999999999999999753 245899999999999999999999   88999999997

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=9.1e-19  Score=175.00  Aligned_cols=129  Identities=22%  Similarity=0.313  Sum_probs=102.8

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++....  ....+.+.+|++++++++|+||+++++++...... ...
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788889999999999999984 579999999996432  22346789999999999999999999998753221 124


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+ +++|.+++..   ..+++.....++.||++||+|||   +.+|+||||||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp  156 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKP  156 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCH
Confidence            569999999 7899999865   35999999999999999999999   88999999997

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.77  E-value=1.1e-18  Score=170.16  Aligned_cols=125  Identities=20%  Similarity=0.319  Sum_probs=108.2

Q ss_pred             cCcccceeecccCcccEEeeec--CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCc------ccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL--PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN------LVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l--~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~N------IV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||++..  .+|+.||||+++.. ....+.+.+|++++.+++|+|      ++++++++.     
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~-----   87 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE-----   87 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE-----
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc-----
Confidence            5688889999999999999974  46889999999753 233467889999999887664      999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+..++||||+ +++|.+++.......+++..+..++.||++||+|||   +.+|+||||||
T Consensus        88 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp  146 (339)
T 1z57_A           88 HHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKP  146 (339)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             cCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCH
Confidence            456789999999 899999998766567999999999999999999999   88999999997

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.76  E-value=1.4e-18  Score=186.81  Aligned_cols=127  Identities=26%  Similarity=0.360  Sum_probs=108.4

Q ss_pred             HhcCcccceeecccCcccEEeeecC----CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ..++|...+.||+|+||.||+|...    .+..||||+++... ....+.|.+|+.++++++|||||+++|++.      
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------  461 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------  461 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence            3456888899999999999999853    24579999987543 333468999999999999999999999984      


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..++||||+++|+|.+++... ...++|..+..++.|+++||+|||   +.+|+||||||
T Consensus       462 ~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp  519 (656)
T 2j0j_A          462 ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA  519 (656)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             cCceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccch
Confidence            34579999999999999999753 345999999999999999999999   88999999997

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.76  E-value=1.9e-18  Score=176.46  Aligned_cols=126  Identities=21%  Similarity=0.300  Sum_probs=108.1

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhC------CCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASV------RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l------~H~NIV~l~g~~~~~~~~  362 (425)
                      ..+|...+.||+|+||.||++.. .+++.||||+++.. ....+++.+|+.++..+      .|+||+++++++.     
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~-----  169 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT-----  169 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE-----
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc-----
Confidence            35688899999999999999974 56899999999753 23345778899888877      5679999999987     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+..++||||++ ++|.+++.......++|..+..|+.||++||+|||   +.+||||||||
T Consensus       170 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp  228 (429)
T 3kvw_A          170 FRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKP  228 (429)
T ss_dssp             ETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSG
T ss_pred             cCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            4567899999997 79999998766567999999999999999999999   88999999997

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.76  E-value=2.6e-18  Score=164.80  Aligned_cols=125  Identities=23%  Similarity=0.338  Sum_probs=107.7

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++.....  .+++.+|++++.+++|++++..++++..    +++..+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~   81 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV   81 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccC----CCCceE
Confidence            46788899999999999999984 6799999999875332  3468999999999999988877777754    456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+ +++|.+++... ...+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus        82 lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp  133 (296)
T 3uzp_A           82 MVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKP  133 (296)
T ss_dssp             EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             EEEEec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCH
Confidence            999999 89999999643 346999999999999999999999   88999999997

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.76  E-value=7.7e-19  Score=173.53  Aligned_cols=128  Identities=14%  Similarity=0.178  Sum_probs=101.6

Q ss_pred             cCcccceeecccCcccEEeeecC----CCCeeEEeeecCCCcc-----------chHHHHHHHHHHhhCCCCcccceeeE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCSAA-----------GDATFKHEVEVIASVRHVNLVALRGY  355 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~----~g~~VAVK~l~~~~~~-----------~~~~f~~Ev~il~~l~H~NIV~l~g~  355 (425)
                      ++|...+.||+|+||.||++...    ++..||||++......           ....+.+|+..+..++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            56888899999999999999864    5789999998754321           12347788899999999999999999


Q ss_pred             EeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..... .....++||||+ +++|.+++....  .+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       117 ~~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  179 (345)
T 2v62_A          117 GLTEFK-GRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKA  179 (345)
T ss_dssp             EEEESS-SCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             cccccC-CCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCH
Confidence            975321 356789999999 999999986432  6999999999999999999999   88999999997

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.76  E-value=2.6e-18  Score=169.31  Aligned_cols=127  Identities=18%  Similarity=0.303  Sum_probs=102.8

Q ss_pred             hcCccc-ceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHH-HHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSR-DNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEV-EVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~-~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev-~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|.. .++||+|+||.||++... +|+.||||++...     .....|+ ..+..++|+||+++++++..... .+..
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~  100 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHH-GKRC  100 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET-TEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC-CCce
Confidence            456777 457999999999999854 7999999999652     1223333 34566799999999999864321 2445


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++.......+++..+..|+.|+++||+|||   +.+|+||||||
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp  156 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKP  156 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence            799999999999999998765567999999999999999999999   88999999997

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.76  E-value=1.9e-18  Score=175.77  Aligned_cols=126  Identities=26%  Similarity=0.401  Sum_probs=102.3

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~~~~L  369 (425)
                      +|...+.||+|+||.||+++. .+|+.||||++....    ..+.+|++++++++|+|||++++++...... +....++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            577789999999999999996 469999999986532    2234799999999999999999998654321 2234579


Q ss_pred             EEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++ ++.+.+..  .....+++.....++.||++||+|||   +.+|+||||||
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  184 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKP  184 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSG
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCh
Confidence            9999985 66666543  23457999999999999999999999   89999999997

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.76  E-value=1.3e-18  Score=187.41  Aligned_cols=127  Identities=20%  Similarity=0.218  Sum_probs=109.4

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccC
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~  363 (425)
                      ..++|...++||+|+||.||+++. .+++.||||+++..   .....+.+..|..++..+ +|+||+++++++.     .
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~-----~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-----T  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-----C
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-----e
Confidence            356799999999999999999985 46889999999742   123346788999999988 6999999999886     4


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..+|||||+++|+|.+++...  ..+++..+..|+.||+.||+|||   +.+||||||||
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp  470 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKL  470 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCS
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCCh
Confidence            56789999999999999999753  35999999999999999999999   88999999997

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.76  E-value=2.4e-18  Score=164.90  Aligned_cols=126  Identities=23%  Similarity=0.335  Sum_probs=104.7

Q ss_pred             HhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ..++|...+.||+|+||.||++.. .+++.||||.+.....  .+++.+|++++.+++|+|++..++++..    +++..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~   80 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYN   80 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecC----CCCce
Confidence            356799999999999999999984 6789999998764322  2468899999999999998888887754    45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+ +|+|.+++... ...+++..+..++.||++||+|||   +.+|+||||||
T Consensus        81 ~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp  133 (296)
T 4hgt_A           81 VMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKP  133 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCH
Confidence            9999999 89999999643 345999999999999999999999   88999999997

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.76  E-value=2e-18  Score=174.40  Aligned_cols=121  Identities=22%  Similarity=0.411  Sum_probs=95.5

Q ss_pred             ceeecccCcccEEeeecC---CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEEe
Q 048791          296 DNIIGRGGYGNVYKGLLP---DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCD  372 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~E  372 (425)
                      +++||+|+||.||++...   +++.||||+++...  ....+.+|++++++++|+|||++++++...   .+...++|||
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~~~~~lv~e  100 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFD  100 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEET---TTTEEEEEEE
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecC---CCCeEEEEEe
Confidence            468999999999999854   57899999997532  235788999999999999999999998642   3567899999


Q ss_pred             cCCCCCHHHHHhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          373 LMKNGSVYDHLFAS-------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       373 y~~~GsL~~~L~~~-------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |++ |+|.+++...       ....+++..+..|+.||+.||+|||   +.+||||||||
T Consensus       101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp  156 (405)
T 3rgf_A          101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKP  156 (405)
T ss_dssp             CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCH
Confidence            997 6888877531       1234999999999999999999999   88999999997

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.76  E-value=2.1e-19  Score=174.49  Aligned_cols=127  Identities=28%  Similarity=0.454  Sum_probs=108.9

Q ss_pred             HHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ...++|...+.||+|+||.||+|...  ..||||.++...  ....+.|.+|++++.+++|+||+++++++.     +.+
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~  102 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-----SPP  102 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-----CSS
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cCC
Confidence            34567888999999999999999864  359999987432  233457889999999999999999999997     455


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++++|.+++... ...+++..+..|+.||++||+|||   +.+|+||||||
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp  158 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKS  158 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCS
T ss_pred             ceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCh
Confidence            689999999999999999653 346999999999999999999999   88999999997

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.75  E-value=6e-19  Score=171.11  Aligned_cols=129  Identities=19%  Similarity=0.311  Sum_probs=102.4

Q ss_pred             HHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc------cchHHHHHHHHHHhhC----CCCcccceeeE
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA------AGDATFKHEVEVIASV----RHVNLVALRGY  355 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~------~~~~~f~~Ev~il~~l----~H~NIV~l~g~  355 (425)
                      ....++|...+.||+|+||.||++.. .+|+.||||+++....      .....+.+|+.++.++    +|+||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34467799999999999999999984 5789999999975332      1224567899999998    89999999999


Q ss_pred             EeeccccCCceEEEEEec-CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDL-MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey-~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +.     ..+..++|+|| +++++|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus       107 ~~-----~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp  167 (312)
T 2iwi_A          107 FE-----TQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKD  167 (312)
T ss_dssp             C----------CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSG
T ss_pred             Ee-----cCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCh
Confidence            86     45567999999 8899999999653  35999999999999999999999   88999999996

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.75  E-value=1.4e-18  Score=173.83  Aligned_cols=129  Identities=23%  Similarity=0.356  Sum_probs=101.4

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~~  365 (425)
                      .++|...+.||+|+||.||+|. ..+|+.||||++....  ....+.+.+|++++++++|+||+++++++..... .+..
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            4678889999999999999998 4678999999996532  2334678899999999999999999999864321 1235


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++|+||+ +++|.+++..   ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp  160 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKP  160 (367)
T ss_dssp             CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCH
Confidence            679999999 6899988853   46999999999999999999999   89999999997

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.75  E-value=3.8e-18  Score=170.48  Aligned_cols=128  Identities=22%  Similarity=0.284  Sum_probs=107.5

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||++....  ....+.+.+|+.++++++|+||+++++++...... +..
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            4678889999999999999998 4578999999997532  23346788999999999999999999998753321 234


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||++ |+|.+++..    .+++.....++.||++||+|||   +.+|+||||||
T Consensus       104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp  155 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  155 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCH
Confidence            7899999997 578888842    4899999999999999999999   88999999997

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.75  E-value=3.2e-18  Score=166.26  Aligned_cols=127  Identities=20%  Similarity=0.215  Sum_probs=110.0

Q ss_pred             HHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCC--CCcccceeeEEeeccccC
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVR--HVNLVALRGYCIATTQLE  363 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~--H~NIV~l~g~~~~~~~~~  363 (425)
                      ...++|...+.||+|+||.||++...+|+.||||++...  .....+.|.+|++++.+++  |+||+++++++.     .
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-----~   99 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----T   99 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE-----C
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee-----c
Confidence            345678889999999999999999888999999999643  2334578999999999997  599999999987     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++..++||| +.+++|.+++...  ..+++..+..|+.|+++||.|||   +.+|+||||||
T Consensus       100 ~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp  155 (313)
T 3cek_A          100 DQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKP  155 (313)
T ss_dssp             SSEEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             CCEEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCc
Confidence            567899999 5679999999753  46899999999999999999999   88999999997

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.75  E-value=2.3e-18  Score=170.84  Aligned_cols=130  Identities=16%  Similarity=0.262  Sum_probs=110.2

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-----------CCcccceeeEEe
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-----------HVNLVALRGYCI  357 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-----------H~NIV~l~g~~~  357 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++.. .....+.+.+|++++.+++           |+||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35688889999999999999984 6789999999974 2334567889999999886           889999999987


Q ss_pred             eccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCC
Q 048791          358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP-AIFHRDIKA  425 (425)
Q Consensus       358 ~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~-~IiHRDLKp  425 (425)
                      .... .+...++||||+ +++|.+++.......+++..+..|+.||+.||+|||   +. +|+||||||
T Consensus        97 ~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp  160 (373)
T 1q8y_A           97 HKGP-NGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKP  160 (373)
T ss_dssp             EEET-TEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSG
T ss_pred             ccCC-CCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCh
Confidence            5332 234679999999 899999998755567999999999999999999999   76 999999997

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.74  E-value=5.3e-18  Score=166.51  Aligned_cols=126  Identities=21%  Similarity=0.352  Sum_probs=106.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCC-CeeEEeeecCCCccchHHHHHHHHHHhhCCCCc------ccceeeEEeeccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDG-SEVALKRFKNCSAAGDATFKHEVEVIASVRHVN------LVALRGYCIATTQ  361 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g-~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~N------IV~l~g~~~~~~~  361 (425)
                      .++|...+.||+|+||.||++.. .++ +.||||+++.. ....+.+.+|++++.+++|+|      ++.+.+++.    
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~----   92 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN----   92 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE----
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee----
Confidence            36788899999999999999984 334 78999999753 334567889999999998766      888888876    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       ..+..++||||+ ++++.+++.......+++..+..|+.||++||+|||   +.+|+||||||
T Consensus        93 -~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp  151 (355)
T 2eu9_A           93 -FHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKP  151 (355)
T ss_dssp             -ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCG
T ss_pred             -eCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence             456789999999 678888887665567999999999999999999999   89999999997

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.74  E-value=4e-18  Score=171.95  Aligned_cols=128  Identities=23%  Similarity=0.354  Sum_probs=101.6

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~~~~~L  369 (425)
                      .+|...+.||+|+||.||+++..++..||+|++.....    ...+|++++++++|+|||++++++..... ......++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            45788899999999999999987777799999864322    22369999999999999999999875433 12334789


Q ss_pred             EEecCCCCCHHHHHh-cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLF-ASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~-~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||++++.+..... ......+++.....++.||++||+|||   +.+|+||||||
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp  169 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKP  169 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCH
Confidence            999998654433322 123456999999999999999999999   88999999997

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.74  E-value=4.2e-18  Score=170.10  Aligned_cols=128  Identities=20%  Similarity=0.330  Sum_probs=106.4

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      .++|...+.||+|+||.||++. ..+|+.||||+++...  ....+.+.+|+.++++++|+||+++++++...... ...
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            4678888999999999999998 4578999999997532  22346789999999999999999999999743321 111


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||++ |+|.+++.    ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus       121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp  172 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKP  172 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCH
Confidence            3499999998 78888773    24999999999999999999999   88999999997

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.74  E-value=1.1e-17  Score=165.29  Aligned_cols=139  Identities=19%  Similarity=0.254  Sum_probs=100.4

Q ss_pred             HHHHHHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeecccc
Q 048791          284 DDIKKATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL  362 (425)
Q Consensus       284 ~ei~~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~  362 (425)
                      .+.....++|...+.||+|+||.||++.. .+|+.||||++.... .....+.+|++.+.+++|+||+++++++......
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            44566778999999999999999999985 578999999986533 2234677888999999999999999998753321


Q ss_pred             --CCceEEEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 --EGHQRIIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 --~~~~~~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        .....++||||+++ +|.+.+..  .....+++.....++.|++.||.|||. .+.+|+||||||
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp  159 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKP  159 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCG
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCH
Confidence              12247899999985 55555433  345568999999999999999999992 367899999997

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.73  E-value=4.4e-18  Score=168.35  Aligned_cols=128  Identities=21%  Similarity=0.330  Sum_probs=105.9

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++....  ....+.+.+|+.++.+++|+||+++++++...... ...
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            35688889999999999999984 579999999997532  22346789999999999999999999998743221 112


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||++ |+|.+++.    ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus       103 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp  154 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKP  154 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCG
T ss_pred             eEEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCH
Confidence            4599999998 68887763    24999999999999999999999   88999999997

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.73  E-value=9.4e-18  Score=163.93  Aligned_cols=127  Identities=25%  Similarity=0.336  Sum_probs=104.6

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHH-HHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVE-VIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~-il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||+++... .....++..|+. +++.++|+||+++++++.     ..+.
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-----~~~~   95 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-----REGD   95 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-----CSSE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-----eCCc
Confidence            35688889999999999999985 478999999997543 233456667776 677789999999999997     4567


Q ss_pred             EEEEEecCCCCCHHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFA---SNGPKLSWPLRQSIALGTARGLAYLHFGAQP-AIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~---~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~-~IiHRDLKp  425 (425)
                      .++||||++ |+|.+++..   .....+++..+..++.++++||.|||   +. +|+||||||
T Consensus        96 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp  154 (327)
T 3aln_A           96 CWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKP  154 (327)
T ss_dssp             EEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCG
T ss_pred             eEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCH
Confidence            899999998 588777753   23457999999999999999999999   66 999999997

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.73  E-value=2.4e-18  Score=184.17  Aligned_cols=132  Identities=20%  Similarity=0.329  Sum_probs=109.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~~~~  367 (425)
                      ++|...+.||+|+||.||++.. .+|+.||||+++.. .....+.|.+|++++.+++||||+++++++..... ..++..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6788899999999999999985 56899999998753 33445679999999999999999999998753211 125677


Q ss_pred             EEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASN-GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~-~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++.... ...+++..+..|+.++++||+|||   +.+|+||||||
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP  149 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKP  149 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCS
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCH
Confidence            99999999999999997632 336999999999999999999999   88999999997

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.73  E-value=4.4e-18  Score=174.00  Aligned_cols=122  Identities=21%  Similarity=0.251  Sum_probs=100.8

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .+|...++||+|+||+||.....+|+.||||++.....   ..+.+|++++.++ +|||||++++++.     +....++
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~-----~~~~~~l   95 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEK-----DRQFQYI   95 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEe-----cCCEEEE
Confidence            45888899999999996554445789999999965332   2467899999999 7999999999987     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||++ |+|.+++.... ..+.+.....|+.||++||+|||   +.+||||||||
T Consensus        96 v~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp  146 (432)
T 3p23_A           96 AIELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKP  146 (432)
T ss_dssp             EEECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCST
T ss_pred             EEECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCH
Confidence            999997 79999997543 33555566789999999999999   88999999997

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.73  E-value=6.8e-18  Score=172.44  Aligned_cols=121  Identities=23%  Similarity=0.179  Sum_probs=96.8

Q ss_pred             cccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCceEEEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      |...++||+|+||+||.+...+|+.||||++...   ..+.+.+|++++.++ +|||||++++++.     .++..++||
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-----~~~~~~lv~   88 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSET-----TDRFLYIAL   88 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEE-----CSSEEEEEE
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEe-----cCCeEEEEE
Confidence            4456889999999997666567999999998642   235678999999986 8999999999886     566789999


Q ss_pred             ecCCCCCHHHHHhcCCCCC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPK-----LSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~-----L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||++ |+|.+++.......     .++..+..|+.||++||+|||   +.+||||||||
T Consensus        89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp  143 (434)
T 2rio_A           89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKP  143 (434)
T ss_dssp             CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCCh
Confidence            9996 79999997542211     233456789999999999999   88999999997

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.73  E-value=1.7e-17  Score=172.20  Aligned_cols=124  Identities=24%  Similarity=0.368  Sum_probs=103.6

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCc-ccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN-LVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~N-IV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||.||+|. ..+|+.||||+++....  ..++..|++++..++|.+ +..+..++.     +++..
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~-----~~~~~   78 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV-----EGDYN   78 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE-----ETTEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe-----eCCEE
Confidence            3578889999999999999998 46799999998865332  246889999999998755 445544444     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||||+ +++|.+++... ...++|..++.|+.||++||+|||   +.+||||||||
T Consensus        79 ~lvme~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP  131 (483)
T 3sv0_A           79 VLVMDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKP  131 (483)
T ss_dssp             EEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCc
Confidence            9999999 89999999643 346999999999999999999999   88999999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.72  E-value=1.8e-17  Score=166.09  Aligned_cols=130  Identities=25%  Similarity=0.312  Sum_probs=108.6

Q ss_pred             HHhcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CC-----cccceeeEEeecc
Q 048791          288 KATRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HV-----NLVALRGYCIATT  360 (425)
Q Consensus       288 ~at~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~-----NIV~l~g~~~~~~  360 (425)
                      ...++|...+.||+|+||.||+|.. .+|+.||||+++.. ....+++..|+.++..++ |+     +++++.+++.   
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---  126 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM---  126 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE---
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec---
Confidence            3467899999999999999999984 46889999999752 233467788999988885 55     4899999987   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        ..+..++||||++ |+|.+++.......+++..+..|+.|++.||+|||.. +.+||||||||
T Consensus       127 --~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp  187 (382)
T 2vx3_A          127 --FRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKP  187 (382)
T ss_dssp             --ETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSG
T ss_pred             --cCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCc
Confidence              4567899999996 6999999876656799999999999999999999921 47899999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.72  E-value=6.8e-18  Score=164.97  Aligned_cols=127  Identities=20%  Similarity=0.361  Sum_probs=108.5

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc------cchHHHHHHHHHHhhCC--CCcccceeeEEeec
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA------AGDATFKHEVEVIASVR--HVNLVALRGYCIAT  359 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~------~~~~~f~~Ev~il~~l~--H~NIV~l~g~~~~~  359 (425)
                      ..++|...+.||+|+||.||+|. ..+|+.||||+++....      ...+.+.+|++++.+++  |+||+++++++.  
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~--  118 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE--  118 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE--
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe--
Confidence            35678889999999999999998 46789999999964321      12246788999999996  599999999997  


Q ss_pred             cccCCceEEEEEecCCC-CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKN-GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~-GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         ..+..++|+||+.+ ++|.+++...  ..+++..+..++.||++||+|||   +.+|+||||||
T Consensus       119 ---~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp  177 (320)
T 3a99_A          119 ---RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKD  177 (320)
T ss_dssp             ---CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             ---cCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCH
Confidence               56678999999986 8999999653  46899999999999999999999   89999999997

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.71  E-value=1.6e-17  Score=161.01  Aligned_cols=126  Identities=18%  Similarity=0.267  Sum_probs=94.5

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc-cchH-HHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA-AGDA-TFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~-~~~~-~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||.||++.. .+|+.||||++..... .... .+..+..++..++|+||+++++++.     +.+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~~~   98 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-----TNTD   98 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-----cCCc
Confidence            45688889999999999999985 4789999999975432 2223 3444556788889999999999997     5567


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQP-AIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~-~IiHRDLKp  425 (425)
                      .++||||+ ++.+.... ......+++..+..++.++++||+|||   .. +|+||||||
T Consensus        99 ~~lv~e~~-~~~~~~l~-~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp  153 (318)
T 2dyl_A           99 VFIAMELM-GTCAEKLK-KRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKP  153 (318)
T ss_dssp             EEEEECCC-SEEHHHHH-HHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCG
T ss_pred             EEEEEecc-CCcHHHHH-HHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCH
Confidence            89999999 34454444 333456999999999999999999999   64 899999997

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.71  E-value=6.7e-18  Score=168.42  Aligned_cols=131  Identities=11%  Similarity=0.004  Sum_probs=90.9

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCc---cchHHHHHHHHHHhhC--CCCccccee-------eEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSA---AGDATFKHEVEVIASV--RHVNLVALR-------GYC  356 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l--~H~NIV~l~-------g~~  356 (425)
                      ..+|...+.||+|+||.||++.. .+|+.||||+++....   ...+.+.+|++++..+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            44588889999999999999994 5789999999986432   2245677885444444  699988744       333


Q ss_pred             eeccc------------cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCe
Q 048791          357 IATTQ------------LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR------QSIALGTARGLAYLHFGAQPAI  418 (425)
Q Consensus       357 ~~~~~------------~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r------~~Ia~~ia~gL~YLH~~~~~~I  418 (425)
                      .....            ......++||||++ |+|.+++.... ..+++..+      ..|+.||++||+|||   +.+|
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~i  215 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQ---SKGL  215 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCC
Confidence            22110            00144799999999 99999997532 23566666      888899999999999   8999


Q ss_pred             eecCCCC
Q 048791          419 FHRDIKA  425 (425)
Q Consensus       419 iHRDLKp  425 (425)
                      |||||||
T Consensus       216 vHrDikp  222 (371)
T 3q60_A          216 VHGHFTP  222 (371)
T ss_dssp             EETTCSG
T ss_pred             ccCcCCH
Confidence            9999997

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.68  E-value=2.8e-17  Score=172.72  Aligned_cols=113  Identities=15%  Similarity=0.193  Sum_probs=85.9

Q ss_pred             ccceeecccCcccEEeeecCCCCeeEEeeecCCCc--c------chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          294 SRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA--A------GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~--~------~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ...++||+|+||.||++.. .++.+++|+......  .      ..+.|.+|++++++++|+||+++..++..     .+
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-----~~  412 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-----LD  412 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-----TT
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-----CC
Confidence            4467899999999999965 578899998643211  1      12458999999999999999977777663     34


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+|||||+++|+|.+++..          +..|+.|+++||+|||   +.+||||||||
T Consensus       413 ~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH---~~gIiHrDiKp  459 (540)
T 3en9_A          413 NKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLH---KNDVIHNDLTT  459 (540)
T ss_dssp             TTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHH---HTTEECTTCCT
T ss_pred             ccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHH---HCcCccCCCCH
Confidence            45999999999999999853          5689999999999999   89999999998

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.66  E-value=7e-17  Score=155.91  Aligned_cols=121  Identities=12%  Similarity=0.154  Sum_probs=94.8

Q ss_pred             HHHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCc------------------cchHHHHHHHHHHhhCC
Q 048791          284 DDIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA------------------AGDATFKHEVEVIASVR  345 (425)
Q Consensus       284 ~ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~------------------~~~~~f~~Ev~il~~l~  345 (425)
                      ..+......|...+.||+|+||.||++...+|+.||||.++....                  .....|.+|++++.+++
T Consensus        83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~  162 (282)
T 1zar_A           83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ  162 (282)
T ss_dssp             HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence            444555556777799999999999999987799999999964221                  12356899999999999


Q ss_pred             CCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       346 H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        | +++.+++.      .+..++||||+++|+|.+ +.      .  .....++.|+++||+|||   +.+||||||||
T Consensus       163 --~-~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH---~~giiHrDlkp  221 (282)
T 1zar_A          163 --G-LAVPKVYA------WEGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFY---HRGIVHGDLSQ  221 (282)
T ss_dssp             --T-SSSCCEEE------EETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCST
T ss_pred             --C-CCcCeEEe------ccceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHH---HCCCEeCCCCH
Confidence              5 67767553      234599999999999988 41      1  123469999999999999   89999999998

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.66  E-value=1.3e-16  Score=168.70  Aligned_cols=115  Identities=15%  Similarity=0.107  Sum_probs=87.3

Q ss_pred             eecccCcccEEeee-cCCCCeeEEeeecCCC----------ccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          298 IIGRGGYGNVYKGL-LPDGSEVALKRFKNCS----------AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       298 ~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~----------~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ..+.|++|.+.++. +-.|+.+|||.+....          ....++|.+|+++|+++ .|+||++++++..     +++
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e-----d~~  315 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE-----NAQ  315 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE-----CSS
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-----ECC
Confidence            35667777666654 3358899999996431          11235799999999999 6999999999997     567


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..||||||+++|+|.+.|...  ..++..   +|+.||+.||+|+|   +.+||||||||
T Consensus       316 ~~yLVMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKP  367 (569)
T 4azs_A          316 SGWLVMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRP  367 (569)
T ss_dssp             EEEEEEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCG
T ss_pred             EEEEEEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHH---HCCceeccCch
Confidence            899999999999999999653  456654   58999999999999   99999999998

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.61  E-value=5.2e-16  Score=157.46  Aligned_cols=133  Identities=16%  Similarity=0.116  Sum_probs=96.2

Q ss_pred             HhcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCC-CcccceeeE--------
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRH-VNLVALRGY--------  355 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H-~NIV~l~g~--------  355 (425)
                      .+++|...++||+|+||.||+|. ..+|+.||||+++....   ...+.|.+|+.++..++| +|......+        
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            44567788999999999999999 56799999999874322   235789999999999987 332211111        


Q ss_pred             -Ee------------eccccCCceEEEEEecCCCCCHHHHHh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 048791          356 -CI------------ATTQLEGHQRIIVCDLMKNGSVYDHLF-----ASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA  417 (425)
Q Consensus       356 -~~------------~~~~~~~~~~~LV~Ey~~~GsL~~~L~-----~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~  417 (425)
                       +.            ..........+++|+++ .++|.+++.     ......++|..++.|+.||++||+|||   +.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~  231 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG  231 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence             10            00000122356677655 589999884     223446899999999999999999999   899


Q ss_pred             eeecCCCC
Q 048791          418 IFHRDIKA  425 (425)
Q Consensus       418 IiHRDLKp  425 (425)
                      ||||||||
T Consensus       232 iiHrDiKp  239 (413)
T 3dzo_A          232 LVHTYLRP  239 (413)
T ss_dssp             EECSCCCG
T ss_pred             cccCCccc
Confidence            99999997

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.49  E-value=1.8e-14  Score=136.96  Aligned_cols=117  Identities=13%  Similarity=0.139  Sum_probs=87.2

Q ss_pred             cccceeecccCcccEEeeec-CCCCe--eEEeeecCCCcc------------------------chHHHHHHHHHHhhCC
Q 048791          293 FSRDNIIGRGGYGNVYKGLL-PDGSE--VALKRFKNCSAA------------------------GDATFKHEVEVIASVR  345 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l-~~g~~--VAVK~l~~~~~~------------------------~~~~f~~Ev~il~~l~  345 (425)
                      +...+.||+|+||.||+|.. .+|+.  ||||.++.....                        ....+.+|+.++.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999997 68989  999987542111                        0136889999999998


Q ss_pred             CCccc--ceeeEEeeccccCCceEEEEEecCC-CC----CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 048791          346 HVNLV--ALRGYCIATTQLEGHQRIIVCDLMK-NG----SVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAI  418 (425)
Q Consensus       346 H~NIV--~l~g~~~~~~~~~~~~~~LV~Ey~~-~G----sL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~I  418 (425)
                      |+|+.  .++.+         +..+|||||+. +|    +|.++...     .++.....++.|+++||.|||.  ..+|
T Consensus       129 ~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~--~~gi  192 (258)
T 1zth_A          129 EAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQ--EAEL  192 (258)
T ss_dssp             HTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHH--TSCE
T ss_pred             hCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHH--HCCE
Confidence            88653  33332         13589999994 24    77766532     2345667899999999999993  5689


Q ss_pred             eecCCCC
Q 048791          419 FHRDIKA  425 (425)
Q Consensus       419 iHRDLKp  425 (425)
                      |||||||
T Consensus       193 vHrDlkp  199 (258)
T 1zth_A          193 VHADLSE  199 (258)
T ss_dssp             ECSSCST
T ss_pred             EeCCCCH
Confidence            9999998

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.35  E-value=2.9e-13  Score=135.90  Aligned_cols=123  Identities=15%  Similarity=0.102  Sum_probs=79.8

Q ss_pred             CcccceeecccCcccEEeeecCCCCeeEEeeecCCCc--------------cchHHHHHHHHHHhhCCCCcccceeeEEe
Q 048791          292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA--------------AGDATFKHEVEVIASVRHVNLVALRGYCI  357 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~--------------~~~~~f~~Ev~il~~l~H~NIV~l~g~~~  357 (425)
                      -|...+.||+|+||.||+|...+|+.||||+++....              ........++.+.+...|+|++++.....
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3778899999999999999988999999998753210              00112233333333334444444432111


Q ss_pred             e-ccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          358 A-TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       358 ~-~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      . ..+......+|||||++++.|.+...      .  .....++.|++.+|.|||   +.+||||||||
T Consensus       176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp  233 (397)
T 4gyi_A          176 PVPEPIAQSRHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLA---KHGLIHGDFNE  233 (397)
T ss_dssp             SCCCEEEEETTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCST
T ss_pred             CCCeeeeccCceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCH
Confidence            0 00001112379999999888865431      1  123468899999999999   88999999997

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.75  E-value=2.2e-08  Score=94.08  Aligned_cols=113  Identities=10%  Similarity=-0.021  Sum_probs=85.1

Q ss_pred             HHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCc
Q 048791          287 KKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       287 ~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~  365 (425)
                      .....+|.....++.|+.+.||+.... |+.+++|+...........+.+|+++++.++ |..+.+++++..     ..+
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~   83 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER-----HDG   83 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----ETT
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-----cCC
Confidence            344566777777888888999998754 6889999986422122346889999999885 677888998876     345


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      ..++||||+++.+|.+.+.       +......++.+++++|+.||.
T Consensus        84 ~~~lv~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           84 WSNLLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEEEEEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhC
Confidence            7899999999999987631       112235788999999999995

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.46  E-value=2.2e-07  Score=86.44  Aligned_cols=104  Identities=9%  Similarity=0.000  Sum_probs=72.7

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCc--ccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN--LVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~N--IV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++....+.+.|..+.||+....+|..++||.....   ....+.+|++++..+++.+  +.+++++..     .++..+
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-----~~~~~~   91 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT-----EAGRDW   91 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-----CSSCEE
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc-----CCCCCE
Confidence            334433333455568999998877889999997643   2246789999999986555  456777765     345679


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      +||||+++.++.  . ..    .+   ...++.++++.|+.||.
T Consensus        92 ~v~e~i~G~~l~--~-~~----~~---~~~~~~~l~~~l~~lh~  125 (264)
T 1nd4_A           92 LLLGEVPGQDLL--S-SH----LA---PAEKVSIMADAMRRLHT  125 (264)
T ss_dssp             EEEECCSSEETT--T-SC----CC---HHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCcccC--c-Cc----CC---HhHHHHHHHHHHHHHhC
Confidence            999999998884  2 11    22   23678888899999984

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.23  E-value=2.9e-06  Score=83.51  Aligned_cols=111  Identities=14%  Similarity=0.189  Sum_probs=79.1

Q ss_pred             cceeecccCcccEEeeecCCCCeeEEeeec--CCC-ccchHHHHHHHHHHhhCC--CCcccceeeEEeeccccCCceEEE
Q 048791          295 RDNIIGRGGYGNVYKGLLPDGSEVALKRFK--NCS-AAGDATFKHEVEVIASVR--HVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~--~~~-~~~~~~f~~Ev~il~~l~--H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ..+.|+.|.++.||+....+ ..+++|+..  ... ......+.+|..++..++  +..+.++++++....  ..+..++
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~~  118 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAFY  118 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeEE
Confidence            34678999999999988754 578888875  322 122357888999999987  456788888876421  1145799


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      ||||+++..+.+..    ...++...+..++.++++.|+.||.
T Consensus       119 vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          119 IMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            99999987774321    2347889999999999999999995

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.35  E-value=0.00064  Score=65.00  Aligned_cols=104  Identities=17%  Similarity=0.147  Sum_probs=71.8

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCc--ccceeeEEeeccccCCceEEEEEec
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVN--LVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~N--IV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      +.++.|....||+..    ..+++|+....  .....+.+|.+++..+. +..  +.+.++......  .....|+||||
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~--~~~~~~~vm~~   97 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE--TYQMSFAGFTK   97 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS--SCSCSCEEEEC
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--CCCcceEEEcc
Confidence            558899999999864    46888886432  33467889999998884 433  334444432111  11245899999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      +++.++.+....    .++..++..++.++++.|+.||.
T Consensus        98 i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           98 IKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHc
Confidence            999888654432    37788888899999999999984

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.19  E-value=0.027  Score=53.88  Aligned_cols=102  Identities=12%  Similarity=0.063  Sum_probs=75.4

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCC---cccceeeEEeeccccCCceEEEEEec
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV---NLVALRGYCIATTQLEGHQRIIVCDL  373 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~---NIV~l~g~~~~~~~~~~~~~~LV~Ey  373 (425)
                      +.++.|....||+.    |..++||+-..  ......+.+|.++|..+++.   .+.+.+.++..    ..+..++||||
T Consensus        25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~e~   94 (306)
T 3tdw_A           25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGYRK   94 (306)
T ss_dssp             EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEEEC
T ss_pred             eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEEec
Confidence            55788888889986    56788888532  22346789999999999753   34566666542    23456899999


Q ss_pred             CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          374 MKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       374 ~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      +++..+.+....    .++...+..++.++++.|+.||.
T Consensus        95 i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           95 VQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             CCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhc
Confidence            999888764422    36788889999999999999993

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=95.74  E-value=0.0072  Score=40.54  Aligned_cols=32  Identities=16%  Similarity=0.260  Sum_probs=18.2

Q ss_pred             eeeehhHHHHHHHHHHHHHHHHHHhhhhhccc
Q 048791          221 GLIAGVLVVCVVGLLLISGGVWIFWRKRVVSN  252 (425)
Q Consensus       221 ~~ii~i~v~~v~~~lll~~~~~~~~rrr~~~~  252 (425)
                      ..|++.+++++++++++++++++++|||+.++
T Consensus        10 ~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~   41 (44)
T 2l2t_A           10 PLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK   41 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             ceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            34555555555545555566677777665443

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=95.68  E-value=0.0097  Score=39.99  Aligned_cols=31  Identities=29%  Similarity=0.401  Sum_probs=17.9

Q ss_pred             eeeehhHHHHHHHHHHHHHHHHHHhhhhhcc
Q 048791          221 GLIAGVLVVCVVGLLLISGGVWIFWRKRVVS  251 (425)
Q Consensus       221 ~~ii~i~v~~v~~~lll~~~~~~~~rrr~~~  251 (425)
                      ..|++.+++++++++++++++++++|||+.+
T Consensus        11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B           11 PSIATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            3455555555554555556667777766544

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=95.46  E-value=0.054  Score=50.09  Aligned_cols=100  Identities=15%  Similarity=0.111  Sum_probs=71.2

Q ss_pred             eecccCcc-cEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEEEEEecC
Q 048791          298 IIGRGGYG-NVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       298 ~IG~G~fG-~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      .+..|..| .||+-... ++..+.||+-...   ...++..|...|+.+. +--+.++++++.     ..+..++|||++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-----~~~~~~lvme~l  102 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIR-----TPDDAWLLTTAI  102 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEE-----ETTEEEEEEECC
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEE-----ECCeEEEEEEee
Confidence            44556555 58987643 4677889986532   2356888999998875 434667888876     345789999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      ++.++.+....      ....+..+..++++.|+-||
T Consensus       103 ~G~~~~~~~~~------~~~~~~~~~~~l~~~L~~Lh  133 (272)
T 4gkh_A          103 PGKTAFQVLEE------YPDSGENIVDALAVFLRRLH  133 (272)
T ss_dssp             CSEEHHHHHHH------CGGGHHHHHHHHHHHHHHHH
T ss_pred             CCccccccccC------CHHHHHHHHHHHHHHHHHhc
Confidence            99888776532      12334568888999999999

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.42  E-value=0.062  Score=50.56  Aligned_cols=95  Identities=17%  Similarity=0.192  Sum_probs=65.8

Q ss_pred             cccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCC---cccceeeEEeeccccCCceEEE
Q 048791          293 FSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV---NLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       293 f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~---NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +.....+|.|..+.||+..+.||+.|.||+-..........|..|...|+.+.-.   -+.+.+++.         ..++
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~~l   87 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTL   87 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEE
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------CceE
Confidence            4445778999999999999999999999987654433345688999999887422   234555442         1379


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      ||||++.+..            +..    .+.++.+.|+-||.
T Consensus        88 v~e~l~~~~~------------~~~----~~~~lg~~La~lH~  114 (288)
T 3f7w_A           88 AMEWVDERPP------------TPE----AAERFGHQLAAMHL  114 (288)
T ss_dssp             EEECCCCCCC------------CHH----HHHHHHHHHHHHHH
T ss_pred             EEEeecccCC------------ChH----HHHHHHHHHHhhhh
Confidence            9999975432            111    23456777888884

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=94.89  E-value=0.018  Score=37.44  Aligned_cols=30  Identities=23%  Similarity=0.273  Sum_probs=20.7

Q ss_pred             cceeeehhHHHHHHHHHHHHHHHHHHhhhh
Q 048791          219 NKGLIAGVLVVCVVGLLLISGGVWIFWRKR  248 (425)
Q Consensus       219 ~~~~ii~i~v~~v~~~lll~~~~~~~~rrr  248 (425)
                      +...+.++++++++.+++++++++++||||
T Consensus         9 s~GaIAGiVvG~v~gv~li~~l~~~~~rrr   38 (38)
T 2k1k_A            9 TGGEIVAVIFGLLLGAALLLGILVFRSRRA   38 (38)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCCceeeeehHHHHHHHHHHHHHHHHeecC
Confidence            445677888887776766666667777654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=94.87  E-value=0.066  Score=52.80  Aligned_cols=102  Identities=9%  Similarity=-0.036  Sum_probs=60.7

Q ss_pred             ceeecccCcccEEeeecC-CCCeeEEeeecCCCc-------cchHHHHHHHHHHhhCCC--Cc-ccceeeEEeeccccCC
Q 048791          296 DNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSA-------AGDATFKHEVEVIASVRH--VN-LVALRGYCIATTQLEG  364 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~-------~~~~~f~~Ev~il~~l~H--~N-IV~l~g~~~~~~~~~~  364 (425)
                      .+.||.|.++.||++... +++.++||.......       ...+.+..|.+++..++.  +. +.+++.+.       .
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~  107 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T  107 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence            467899999999999754 468899998653211       123457789999887742  33 33555442       2


Q ss_pred             ceEEEEEecCCCCC-HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          365 HQRIIVCDLMKNGS-VYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       365 ~~~~LV~Ey~~~Gs-L~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      +..++||||+++.. +.+.+....   ...    .++..+++.|+-+|
T Consensus       108 ~~~~lvmE~l~g~~~~~~~l~~~~---~~~----~~~~~l~~~La~lH  148 (397)
T 2olc_A          108 EMAVTVMEDLSHLKIARKGLIEGE---NYP----HLSQHIGEFLGKTL  148 (397)
T ss_dssp             TTTEEEECCCTTSEEHHHHHHTTC---CCT----THHHHHHHHHHHHH
T ss_pred             CccEEEEEeCCCcchHHHHHhcCC---cCH----HHHHHHHHHHHHHh
Confidence            23489999998643 333332211   111    23456666666666

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=94.55  E-value=0.11  Score=50.04  Aligned_cols=93  Identities=14%  Similarity=0.110  Sum_probs=69.1

Q ss_pred             cceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC---CCcccceeeEEeeccccCCceEEEEE
Q 048791          295 RDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR---HVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       295 ~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~---H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      ..+.|+.|....+|+... ++..++||+....   ....|..|.+.|+.+.   ...+.+.++++.     ..+..++||
T Consensus        40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~~lvm  110 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHSFLLL  110 (312)
T ss_dssp             EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEEEEEE
T ss_pred             eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCceEEEE
Confidence            346789999999999886 4667888887532   2457889999888874   256778888775     345689999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      ||+++..+..                ..+.++++.|+-||.
T Consensus       111 e~l~G~~~~~----------------~~~~~lG~~LA~LH~  135 (312)
T 3jr1_A          111 EALNKSKNKQ----------------SSFTIFAEKIAQLHQ  135 (312)
T ss_dssp             ECCCCCCCCT----------------THHHHHHHHHHHHHH
T ss_pred             EeccCCCCCc----------------hhHHHHHHHHHHHHc
Confidence            9999765310                245678999999994

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=94.54  E-value=0.031  Score=54.16  Aligned_cols=113  Identities=13%  Similarity=0.003  Sum_probs=74.9

Q ss_pred             eee-cccCcccEEeeecC-------CCCeeEEeeecCCC---ccchHHHHHHHHHHhhCC-C--CcccceeeEEeecccc
Q 048791          297 NII-GRGGYGNVYKGLLP-------DGSEVALKRFKNCS---AAGDATFKHEVEVIASVR-H--VNLVALRGYCIATTQL  362 (425)
Q Consensus       297 ~~I-G~G~fG~Vykg~l~-------~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~-H--~NIV~l~g~~~~~~~~  362 (425)
                      +.| +.|....+|+....       ++..+++|+-....   ......+.+|..++..++ +  -.+.++++++..... 
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~-  104 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV-  104 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence            567 77888899987754       26678888764322   111246788999988885 3  346677877643211 


Q ss_pred             CCceEEEEEecCCCCCHHHHHh---c-CCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLF---A-SNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~---~-~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                       .+..++||||+++..+.+.+.   . .....++..++..++.++++.|+-||
T Consensus       105 -~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH  156 (357)
T 3ats_A          105 -LGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLH  156 (357)
T ss_dssp             -TSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred             -cCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHh
Confidence             134689999999877754321   0 00113567777889999999999999

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=92.93  E-value=0.062  Score=35.94  Aligned_cols=28  Identities=14%  Similarity=0.166  Sum_probs=12.4

Q ss_pred             eeeehhHHHHHHHHHHHHHHHHHHhhhhh
Q 048791          221 GLIAGVLVVCVVGLLLISGGVWIFWRKRV  249 (425)
Q Consensus       221 ~~ii~i~v~~v~~~lll~~~~~~~~rrr~  249 (425)
                      ..+++.+++ ++.++++.+.+++++|||+
T Consensus        12 ~~Ia~~vVG-vll~vi~~l~~~~~~RRR~   39 (44)
T 2jwa_A           12 TSIISAVVG-ILLVVVLGVVFGILIKRRQ   39 (44)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred             cchHHHHHH-HHHHHHHHHHHHhheehhh
Confidence            345555555 3323333333444444443

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=92.81  E-value=0.3  Score=46.30  Aligned_cols=78  Identities=15%  Similarity=0.166  Sum_probs=41.2

Q ss_pred             eeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCC--CcccceeeEEeecc-ccCCceEEEEEec
Q 048791          297 NIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRH--VNLVALRGYCIATT-QLEGHQRIIVCDL  373 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H--~NIV~l~g~~~~~~-~~~~~~~~LV~Ey  373 (425)
                      ..|+.|..+.||+....+| .+++|+....    ..++..|..++..++.  -.+.+++....... ...++..++||||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            4465567889999887555 4889988651    2334455665555531  12333332100000 0024467999999


Q ss_pred             CCCCCH
Q 048791          374 MKNGSV  379 (425)
Q Consensus       374 ~~~GsL  379 (425)
                      +++..+
T Consensus       113 i~G~~~  118 (346)
T 2q83_A          113 IEGRPF  118 (346)
T ss_dssp             CCCBCC
T ss_pred             ecCccC
Confidence            997643

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=89.52  E-value=0.026  Score=57.76  Aligned_cols=32  Identities=22%  Similarity=0.193  Sum_probs=25.6

Q ss_pred             ccchHHHHHHHHHHhhCCCCcccceeeEEeec
Q 048791          328 AAGDATFKHEVEVIASVRHVNLVALRGYCIAT  359 (425)
Q Consensus       328 ~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~  359 (425)
                      .++.++|..|++++++++|+|||+++|||.+.
T Consensus       320 ~~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          320 GQGSETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             cccHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            45578999999999999999999999999854

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.28  E-value=0.069  Score=54.41  Aligned_cols=59  Identities=5%  Similarity=0.028  Sum_probs=17.7

Q ss_pred             eeecccCcccEEeeecCC-CCeeEE------eeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEee
Q 048791          297 NIIGRGGYGNVYKGLLPD-GSEVAL------KRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIA  358 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~~-g~~VAV------K~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~  358 (425)
                      +.||   ||.||+|.+.. ..+|||      |..+...  .....+|.+|..++.+.+|+|+++.+++...
T Consensus       148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            4455   99999999854 468999      7765422  2233578899999999999999999998764

>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}

Probab=82.30  E-value=0.74  Score=30.05  Aligned_cols=7  Identities=14%  Similarity=0.425  Sum_probs=3.0

Q ss_pred             HHHHhhh
Q 048791          241 VWIFWRK  247 (425)
Q Consensus       241 ~~~~~rr  247 (425)
                      .+++|||
T Consensus        33 ~~~~~rR   39 (41)
T 2k9y_A           33 GFFIHRR   39 (41)
T ss_dssp             HHSSSSS
T ss_pred             heeEeee
Confidence            3444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	425
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-31
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-28
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-28
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-28
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-27
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-26
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-26
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-26
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-26
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-26
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-25
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-25
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-25
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-25
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-24
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-24
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-24
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-24
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-24
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-24
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-23
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-23
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-23
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-22
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-22
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-22
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-22
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-21
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-21
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-21
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-21
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-20
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-20
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-20
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-20
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-20
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-20
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-20
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-20
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-19
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-19
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-19
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-19
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-18
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-18
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-17
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-17
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-17
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	6e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-17
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-16
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-16
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-15
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-15
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-14
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	9e-14
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-12

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 6e-31
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
                  +G G +G V+ G     ++VA+K  K  S + DA F  E  ++  ++H  LV 
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVR 72

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
           L                I+ + M+NGS+ D L   +G KL+      +A   A G+A++ 
Sbjct: 73  LYAVV------TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126

Query: 412 FGAQPAIFHRDIKA 425
              +    HRD++A
Sbjct: 127 ---ERNYIHRDLRA 137

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 1e-28
 Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 10/134 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
             +    IG G +G VYKG       V +      +      FK+EV V+   RHVN++ 
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
             GY          Q  IV    +  S+Y HL      K        IA  TA+G+ YLH
Sbjct: 69  FMGYS------TAPQLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLH 121

Query: 412 FGAQPAIFHRDIKA 425
                +I HRD+K+
Sbjct: 122 A---KSIIHRDLKS 132

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 5e-28
 Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           +       IG+G +G+V  G    G++VA+K  KN + A    F  E  V+  +RH NLV
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA--FLAEASVMTQLRHSNLV 63

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L G  +     E     IV + M  GS+ D+L +     L        +L     + YL
Sbjct: 64  QLLGVIVE----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 119

Query: 411 HFGAQPAIFHRDIKA 425
                    HRD+ A
Sbjct: 120 E---GNNFVHRDLAA 131

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 6e-28
 Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 15/142 (10%)

Query: 289 ATRNFSRDNI-IGRGGYGNVYKGLL---PDGSEVALKRFKNCSAAGD-ATFKHEVEVIAS 343
              N    +I +G G +G+V +G+        +VA+K  K  +   D      E +++  
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGT 403
           + +  +V L G C      +    ++V ++   G ++  L       +       +    
Sbjct: 66  LDNPYIVRLIGVC------QAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQV 118

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
           + G+ YL         HRD+ A
Sbjct: 119 SMGMKYLEE---KNFVHRDLAA 137

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  109 bits (272), Expect = 1e-27
 Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 23/159 (14%)

Query: 281 FTFDDIKKATRNFSR---------DNIIGRGGYGNVYKGLLPDGSE----VALKRFK-NC 326
           FTF+D  +A R F++         + +IG G +G V  G L    +    VA+K  K   
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 327 SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFAS 386
           +      F  E  ++    H N++ L G        +    +I+ + M+NGS+ D     
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVT-----KSTPVMIITEFMENGSL-DSFLRQ 120

Query: 387 NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
           N  + +      +  G A G+ YL         HRD+ A
Sbjct: 121 NDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAA 156

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 1e-26
 Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           ++ +    +G G +G V  G      +VA+K  K   +  +  F  E +V+ ++ H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLV 62

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L G C      +     I+ + M NG + ++L               +       + YL
Sbjct: 63  QLYGVCT-----KQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYL 116

Query: 411 HFGAQPAIFHRDIKA 425
                    HRD+ A
Sbjct: 117 ES---KQFLHRDLAA 128

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 2e-26
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 11/136 (8%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGD-ATFKHEVEVIASVRHVNL 349
           +F + + +G G  G V+K    P G  +A K                E++V+       +
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           V   G           +  I  + M  GS+   L  +   ++   +   +++   +GL Y
Sbjct: 67  VGFYGAFY-----SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTY 119

Query: 410 LHFGAQPAIFHRDIKA 425
           L    +  I HRD+K 
Sbjct: 120 LR--EKHKIMHRDVKP 133

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 2e-26
 Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 10/134 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
           +   +  +G+G +G V+ G     + VA+K  K         F  E +V+  +RH  LV 
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
           L                IV + M  GS+ D L    G  L  P    +A   A G+AY+ 
Sbjct: 77  LYAVV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130

Query: 412 FGAQPAIFHRDIKA 425
                   HRD++A
Sbjct: 131 R---MNYVHRDLRA 141

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (262), Expect = 3e-26
 Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 10/147 (6%)

Query: 280 RFTFDDIKKATRNFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAAGDATFKHEV 338
              +D  +    + +  + +G G YG VY+G+       VA+K  K  +   +  F  E 
Sbjct: 6   SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEA 64

Query: 339 EVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQS 398
            V+  ++H NLV L G C            I+ + M  G++ D+L   N  ++S  +   
Sbjct: 65  AVMKEIKHPNLVQLLGVCT-----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 119

Query: 399 IALGTARGLAYLHFGAQPAIFHRDIKA 425
           +A   +  + YL    +    HRD+ A
Sbjct: 120 MATQISSAMEYLE---KKNFIHRDLAA 143

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 9e-26
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 10/134 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
             +    IG G +G V+ G   +  +VA+K  +   A  +  F  E EV+  + H  LV 
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
           L G C+     E     +V + M++G + D+L  +     +      + L    G+AYL 
Sbjct: 65  LYGVCL-----EQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 412 FGAQPAIFHRDIKA 425
              +  + HRD+ A
Sbjct: 119 ---EACVIHRDLAA 129

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  103 bits (257), Expect = 2e-25
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 281 FTFDDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD---ATFKH 336
           F  DD +K    FS    IG G +G VY    + +   VA+K+        +        
Sbjct: 8   FFKDDPEK---LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64

Query: 337 EVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR 396
           EV  +  +RH N +  RG  +       H   +V +     +        +   L     
Sbjct: 65  EVRFLQKLRHPNTIQYRGCYL-----REHTAWLVMEYCLGSASDLLEV--HKKPLQEVEI 117

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIKA 425
            ++  G  +GLAYLH      + HRD+KA
Sbjct: 118 AAVTHGALQGLAYLH---SHNMIHRDVKA 143

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 4e-25
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKN--CSAAGDATFKHEVEVIASVRHV 347
           R    D  IGRG +  VYKGL  +   EVA    ++   + +    FK E E++  ++H 
Sbjct: 9   RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHP 68

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           N+V       +T + +    ++V +LM +G++  +L       +   + +S      +GL
Sbjct: 69  NIVRFYDSWESTVKGKKC-IVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGL 125

Query: 408 AYLHFGAQPAIFHRDIKA 425
            +LH    P I HRD+K 
Sbjct: 126 QFLHT-RTPPIIHRDLKC 142

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 6e-25
 Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 16/135 (11%)

Query: 296 DNIIGRGGYGNVYKGLLPD---GSEVALKRFKNCSAAGDAT--FKHEVEVIASVRHVNLV 350
           D  +G G +G V KG          VA+K  KN +           E  V+  + +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            + G C      E    ++V ++ + G +  +L       +       +    + G+ YL
Sbjct: 72  RMIGIC------EAESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYL 123

Query: 411 HFGAQPAIFHRDIKA 425
                    HRD+ A
Sbjct: 124 EE---SNFVHRDLAA 135

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (252), Expect = 6e-25
 Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 299 IGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           +G G +G VYK          A K     S      +  E++++AS  H N+V L     
Sbjct: 20  LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 79

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA 417
                  +   I+ +    G+V   +     P L+    Q +   T   L YLH      
Sbjct: 80  -----YENNLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLH---DNK 130

Query: 418 IFHRDIKA 425
           I HRD+KA
Sbjct: 131 IIHRDLKA 138

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 1e-24
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 11/132 (8%)

Query: 299 IGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIA 358
           IG+G +G V++G    G EVA+K F +         + E+     +RH N++        
Sbjct: 11  IGKGRFGEVWRGKW-RGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILGFIAADN- 67

Query: 359 TTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH-----FG 413
                  Q  +V D  ++GS++D+L   N   ++      +AL TA GLA+LH       
Sbjct: 68  KDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124

Query: 414 AQPAIFHRDIKA 425
            +PAI HRD+K+
Sbjct: 125 GKPAIAHRDLKS 136

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  101 bits (252), Expect = 2e-24
 Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 10/127 (7%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           +G G +G V++ +    G     K           T K+E+ ++  + H  L+ L     
Sbjct: 37  LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 96

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA 417
                + ++ +++ + +  G ++D + A+   K+S     +       GL ++H   + +
Sbjct: 97  -----DKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMH---EHS 147

Query: 418 IFHRDIK 424
           I H DIK
Sbjct: 148 IVHLDIK 154

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 3e-24
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 32/158 (20%)

Query: 292 NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSAAGDA-TFKHEVEVIASV 344
             S    +G G +G V +              VA+K  K  +   +      E++V++ +
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 345 -RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL----------------FASN 387
             H+N+V L G C       G   +++ +    G + + L                   +
Sbjct: 84  GNHMNIVNLLGACT-----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 388 GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
              L      S +   A+G+A+L         HRD+ A
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAA 173

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  100 bits (250), Expect = 3e-24
 Identities = 23/134 (17%), Positives = 55/134 (41%), Gaps = 10/134 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           ++     +G G +G V++      G+  A K       +   T + E++ ++ +RH  LV
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLV 86

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L          + ++ +++ + M  G +++ +   +   +S            +GL ++
Sbjct: 87  NLHDAFE-----DDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHM 140

Query: 411 HFGAQPAIFHRDIK 424
           H   +    H D+K
Sbjct: 141 H---ENNYVHLDLK 151

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 4e-24
 Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 10/137 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           +++   +IG G +G VY+  L   G  VA+K+              E++++  + H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIV 76

Query: 351 ALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPK-LSWPLRQSIALGTARGLA 408
            LR +  ++ + +    + +V D +           S   + L     +       R LA
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136

Query: 409 YLHFGAQPAIFHRDIKA 425
           Y+H      I HRDIK 
Sbjct: 137 YIH---SFGICHRDIKP 150

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (244), Expect = 6e-24
 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 14/137 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVRHV 347
           +F     +G+G +GNVY          +ALK                + EVE+ + +RH 
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           N++ L GY       +  +  ++ +    G+VY  L      K       +     A  L
Sbjct: 67  NILRLYGYFH-----DATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANAL 119

Query: 408 AYLHFGAQPAIFHRDIK 424
           +Y H      + HRDIK
Sbjct: 120 SYCH---SKRVIHRDIK 133

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (244), Expect = 1e-23
 Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 12/137 (8%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVN 348
            + ++R   IG+G  G VY  + +  G EVA+++             +E+ V+   ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V      +      G +  +V + +  GS+ D +       +      ++     + L 
Sbjct: 79  IVNYLDSYL-----VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALE 130

Query: 409 YLHFGAQPAIFHRDIKA 425
           +LH      + HRDIK+
Sbjct: 131 FLH---SNQVIHRDIKS 144

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 1e-23
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 12/136 (8%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRF-KNCSAAGDATFKHEVEVIASVRHVNL 349
           ++     +G G YG V           VA+K      +       K E+ +   + H N+
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           V   G+       EG+ + +  +    G ++D +       +  P  Q        G+ Y
Sbjct: 66  VKFYGHRR-----EGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVY 118

Query: 410 LHFGAQPAIFHRDIKA 425
           LH      I HRDIK 
Sbjct: 119 LH---GIGITHRDIKP 131

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (241), Expect = 2e-23
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 10/141 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVN 348
           ++     IG G YG   K     DG  +  K     + + A       EV ++  ++H N
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPK--LSWPLRQSIALGTARG 406
           +V      I  T        IV +  + G +   +      +  L       +       
Sbjct: 65  IVRYYDRIIDRT---NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121

Query: 407 LAYLHFGAQPA--IFHRDIKA 425
           L   H  +     + HRD+K 
Sbjct: 122 LKECHRRSDGGHTVLHRDLKP 142

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.5 bits (242), Expect = 3e-23
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 49/201 (24%)

Query: 263 NRIEMGLESIHESTNLVRFTFDDIKKATRN----FSRDNI-----IGRGGYGNVYKGLLP 313
           ++++M ++    S N   + + D ++   +    F R+N+     +G G +G V      
Sbjct: 3   SQLQM-VQVTGSSDN--EYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAY 59

Query: 314 DGSE------VALKRFKNCSAAGD-ATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH 365
             S+      VA+K  K  + + +      E++++  +  H N+V L G C         
Sbjct: 60  GISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT-----LSG 114

Query: 366 QRIIVCDLMKNGSVYDHLFASNGP---------------------KLSWPLRQSIALGTA 404
              ++ +    G + ++L +                          L++      A   A
Sbjct: 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVA 174

Query: 405 RGLAYLHFGAQPAIFHRDIKA 425
           +G+ +L      +  HRD+ A
Sbjct: 175 KGMEFLE---FKSCVHRDLAA 192

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 2e-22
 Identities = 28/142 (19%), Positives = 45/142 (31%), Gaps = 14/142 (9%)

Query: 287 KKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD---ATFKHEVEVIA 342
           KK   +F    I+G G +  V     L    E A+K  +      +        E +V++
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 343 SVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALG 402
            + H   V L          +  +        KNG +  ++             +     
Sbjct: 64  RLDHPFFVKLYFTFQ-----DDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAE 116

Query: 403 TARGLAYLHFGAQPAIFHRDIK 424
               L YLH      I HRD+K
Sbjct: 117 IVSALEYLH---GKGIIHRDLK 135

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 3e-22
 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 15/145 (10%)

Query: 285 DIKKATRNFSRDNIIGRGGYGNVYKGLLPDGS----EVALKRFKNCSAAGD-ATFKHEVE 339
                  +F  + +IGRG +G VY G L D        A+K     +  G+ + F  E  
Sbjct: 23  GPSSLIVHF--NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI 80

Query: 340 VIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSI 399
           ++    H N+++L G C+ +        ++V   MK+G + +    +     +       
Sbjct: 81  IMKDFSHPNVLSLLGICLRS----EGSPLVVLPYMKHGDLRNF-IRNETHNPTVKDLIGF 135

Query: 400 ALGTARGLAYLHFGAQPAIFHRDIK 424
            L  A+G+ +L         HRD+ 
Sbjct: 136 GLQVAKGMKFLAS---KKFVHRDLA 157

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.1 bits (233), Expect = 3e-22
 Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 27/153 (17%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGS---EVALKRFKNCSAAGDAT-FKHEVEVIASV-RH 346
           +    ++IG G +G V K  +       + A+KR K  ++  D   F  E+EV+  +  H
Sbjct: 11  DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 70

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHL--------------FASNGPKLS 392
            N++ L G C            +  +   +G++ D L                S    LS
Sbjct: 71  PNIINLLGACE-----HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125

Query: 393 WPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
                  A   ARG+ YL    Q    HRD+ A
Sbjct: 126 SQQLLHFAADVARGMDYLS---QKQFIHRDLAA 155

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 4e-22
 Identities = 33/139 (23%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPD----GSEVALKRFKNCSAAGD-ATFKHEVEVIASVRH 346
                  IG G +G+V++G+          VA+K  KNC++      F  E   +    H
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            ++V L G          +   I+ +L   G +   L       L        A   +  
Sbjct: 68  PHIVKLIGVI------TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 120

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           LAYL         HRDI A
Sbjct: 121 LAYLE---SKRFVHRDIAA 136

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.5 bits (229), Expect = 2e-21
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 11/129 (8%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGY 355
           ++G G  G V +        + ALK  ++C        + EVE+     +  ++V +   
Sbjct: 19  VLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIVDV 73

Query: 356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ 415
                       +IV + +  G ++  +        +      I       + YLH    
Sbjct: 74  YENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---S 129

Query: 416 PAIFHRDIK 424
             I HRD+K
Sbjct: 130 INIAHRDVK 138

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.4 bits (226), Expect = 2e-21
 Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 15/140 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSE-----VALKRFKNCSAAGD-ATFKHEVEVIASVR 345
             +R  +IG G +G VYKG+L   S      VA+K  K          F  E  ++    
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67

Query: 346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR 405
           H N++ L G        +    +I+ + M+NG++          + S      +  G A 
Sbjct: 68  HHNIIRLEGVIS-----KYKPMMIITEYMENGALDKF-LREKDGEFSVLQLVGMLRGIAA 121

Query: 406 GLAYLHFGAQPAIFHRDIKA 425
           G+ YL         HRD+ A
Sbjct: 122 GMKYLA---NMNYVHRDLAA 138

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.6 bits (224), Expect = 3e-21
 Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 17/142 (11%)

Query: 291 RNFSRDNIIGRGGYGNVYKGLLP----DGSEVALKRFKNCSAAGD---ATFKHEVEVIAS 343
           ++      +G G +G V +G           VA+K  K    +       F  EV  + S
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGT 403
           + H NL+ L G              +V +L   GS+ D L    G           A+  
Sbjct: 68  LDHRNLIRLYGVV------LTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQV 120

Query: 404 ARGLAYLHFGAQPAIFHRDIKA 425
           A G+ YL         HRD+ A
Sbjct: 121 AEGMGYLE---SKRFIHRDLAA 139

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 4e-21
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 23/149 (15%)

Query: 292 NFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSAAGD-ATFKHEVEVIASV 344
             +    +G+G +G VY+G+          + VA+K     ++  +   F +E  V+   
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 345 RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNG--------PKLSWPLR 396
              ++V L G        +G   +++ +LM  G +  +L +              S    
Sbjct: 81  NCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             +A   A G+AYL+        HRD+ A
Sbjct: 136 IQMAGEIADGMAYLN---ANKFVHRDLAA 161

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 1e-20
 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 12/137 (8%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA--TFKHEVEVIASVRHVN 348
           NF +   IG G YG VYK      G  VALK+ +  +       T   E+ ++  + H N
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V L            ++  +V + + +  +   + AS    +  PL +S      +GLA
Sbjct: 63  IVKLLDVIH-----TENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116

Query: 409 YLHFGAQPAIFHRDIKA 425
           + H      + HRD+K 
Sbjct: 117 FCH---SHRVLHRDLKP 130

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 1e-20
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 9/138 (6%)

Query: 290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA-TFKHEVEVIASVRHV 347
              ++  + IG G YG V       +   VA+K+               E++++   RH 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
           N++ +     A T  +     +V  LM    +Y  L       LS            RGL
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL---KTQHLSNDHICYFLYQILRGL 122

Query: 408 AYLHFGAQPAIFHRDIKA 425
            Y+H      + HRD+K 
Sbjct: 123 KYIH---SANVLHRDLKP 137

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 2e-20
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCI 357
           +GRG +G V++ +          K  K          K E+ ++   RH N++ L     
Sbjct: 13  LGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNILHLHESFE 71

Query: 358 ATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA 417
                   + +++ + +    +++ +  ++  +L+     S        L +LH      
Sbjct: 72  -----SMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLH---SHN 122

Query: 418 IFHRDIKA 425
           I H DI+ 
Sbjct: 123 IGHFDIRP 130

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.1 bits (220), Expect = 2e-20
 Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 42/167 (25%)

Query: 293 FSRDNI-----IGRGGYGNVYKGLLP------DGSEVALKRFKNCSAAGD-ATFKHEVEV 340
           + R+NI     IG G +G V++   P        + VA+K  K  ++A   A F+ E  +
Sbjct: 10  YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 69

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLF---------------- 384
           +A   + N+V L G C       G    ++ + M  G + + L                 
Sbjct: 70  MAEFDNPNIVKLLGVCA-----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 124

Query: 385 ------ASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
                 +   P LS   +  IA   A G+AYL    +    HRD+  
Sbjct: 125 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLAT 168

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 89.8 bits (222), Expect = 2e-20
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 17/141 (12%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPD-GSEVALKRFKNCSAA---GDATFKHEVEVIA---SV 344
           +FS   IIGRGG+G VY     D G   A+K           G+    +E  +++   + 
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 345 RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTA 404
               +V +             +   + DLM  G ++ HL  S     S    +  A    
Sbjct: 65  DCPFIVCMSYAFH-----TPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEII 117

Query: 405 RGLAYLHFGAQPAIFHRDIKA 425
            GL ++H      + +RD+K 
Sbjct: 118 LGLEHMH---NRFVVYRDLKP 135

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 2e-20
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 16/139 (11%)

Query: 293 FSRDNIIGRGGYGNVYKG-LLPDGSE----VALKRFK-NCSAAGDATFKHEVEVIASVRH 346
           F +  ++G G +G VYKG  +P+G +    VA+K  +   S   +     E  V+ASV +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
            ++  L G C            ++  LM  G + D+    +   +      +  +  A+G
Sbjct: 71  PHVCRLLGIC------LTSTVQLITQLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKG 123

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           + YL       + HRD+ A
Sbjct: 124 MNYLED---RRLVHRDLAA 139

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 87.5 bits (216), Expect = 4e-20
 Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVRHVN 348
           +    I+G GG   V+    L    +VA+K  +   A        F+ E +  A++ H  
Sbjct: 9   YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 68

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +VA+     A T   G    IV + +   ++ D +       ++      +     + L 
Sbjct: 69  IVAVYDTGEAETP-AGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALN 125

Query: 409 YLHFGAQPAIFHRDIK 424
           + H   Q  I HRD+K
Sbjct: 126 FSH---QNGIIHRDVK 138

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 5e-20
 Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 32/158 (20%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLP--------DGSEVALKRFKNCSAAGDAT-FKHEVEVIA 342
                  +G G +G V                ++VA+K  K+ +   D +    E+E++ 
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 343 SV-RHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP------------ 389
            + +H N++ L G C      +     ++ +    G++ ++L A   P            
Sbjct: 74  MIGKHKNIINLLGACT-----QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128

Query: 390 --KLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
             +LS     S A   ARG+ YL         HRD+ A
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAA 163

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.2 bits (215), Expect = 8e-20
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 288 KATRNFSRDNIIGRGGYGNVYKG--LLPDGSEVALKRFKNCSAAGDA--TFKHEVEV--- 340
           +A + +     IG G YG V+K   L   G  VALKR +  +       +   EV V   
Sbjct: 4   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           + +  H N+V L   C  +      +  +V + + +  +  +L     P +     + + 
Sbjct: 64  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 122

Query: 401 LGTARGLAYLHFGAQPAIFHRDIK 424
               RGL +LH      + HRD+K
Sbjct: 123 FQLLRGLDFLH---SHRVVHRDLK 143

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.6 bits (214), Expect = 1e-19
 Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 15/142 (10%)

Query: 284 DDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD-ATFKHEVEVI 341
           +DI+     +   +++G G +  V           VA+K     +  G   + ++E+ V+
Sbjct: 5   EDIRD---IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

Query: 342 ASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIAL 401
             ++H N+VAL           G    ++  L+  G ++D +        +      +  
Sbjct: 62  HKIKHPNIVALDDIYE-----SGGHLYLIMQLVSGGELFDRI--VEKGFYTERDASRLIF 114

Query: 402 GTARGLAYLHFGAQPAIFHRDI 423
                + YLH      I HRD+
Sbjct: 115 QVLDAVKYLH---DLGIVHRDL 133

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 85.9 bits (212), Expect = 1e-19
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 21/145 (14%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA---------TFKHEVEVI 341
           N+    I+GRG    V + +  P   E A+K          +             EV+++
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 342 ASVR-HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
             V  H N++ L+               +V DLMK G ++D+L  +    LS    + I 
Sbjct: 64  RKVSGHPNIIQLKDTYE-----TNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIM 116

Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
                 +  LH   +  I HRD+K 
Sbjct: 117 RALLEVICALH---KLNIVHRDLKP 138

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 3e-19
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 15/153 (9%)

Query: 281 FTFDDIKKATRNFSRD----NIIGRGGYGNVYKGL-LPDGSEVALKRFKN--CSAAGDAT 333
           F   ++ K              +G G YG V   +    G++VA+K+      S      
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLS 392
              E+ ++  +RH N++ L         L+      +V   M  G+    L      KL 
Sbjct: 64  AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHE--KLG 119

Query: 393 WPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
               Q +     +GL Y+H      I HRD+K 
Sbjct: 120 EDRIQFLVYQMLKGLRYIH---AAGIIHRDLKP 149

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 9e-19
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 29/156 (18%)

Query: 292 NFSRDNIIGRGGYGNVYKGL------LPDGSEVALKRFKNCSAAGDA-TFKHEVEVIAS- 343
                  +GRG +G V +              VA+K  K  +   +      E++++   
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 344 VRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGP-------------- 389
             H+N+V L G C       G   +++ +  K G++  +L +                  
Sbjct: 74  GHHLNVVNLLGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129

Query: 390 KLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA 425
            L+       +   A+G+ +L         HRD+ A
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 162

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 83.7 bits (206), Expect = 1e-18
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 12/134 (8%)

Query: 293 FSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVA 351
           +     IG G +G++Y G  +  G EVA+K               E ++   ++    + 
Sbjct: 9   YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV--KTKHPQLHIESKIYKMMQGGVGIP 66

Query: 352 LRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH 411
              +C A    EG   ++V +L+      + LF     K S      +A      + Y+H
Sbjct: 67  TIRWCGA----EGDYNVMVMELLGPSL--EDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 412 FGAQPAIFHRDIKA 425
                   HRD+K 
Sbjct: 121 ---SKNFIHRDVKP 131

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 82.6 bits (203), Expect = 2e-18
 Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 292 NFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVNL 349
            +     IG G YG VYK     G   ALK+ +         +T   E+ ++  ++H N+
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           V L             + ++V + +             G  L     +S  L    G+AY
Sbjct: 63  VKLYDVIH-----TKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAY 115

Query: 410 LHFGAQPAIFHRDIKA 425
            H      + HRD+K 
Sbjct: 116 CH---DRRVLHRDLKP 128

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.7 bits (198), Expect = 2e-17
 Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 9/145 (6%)

Query: 284 DDIKKATRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKN--CSAAGDATFKHEVEV 340
             I +    +   + +G G YG+V        G  VA+K+      S         E+ +
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70

Query: 341 IASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIA 400
           +  ++H N++ L         LE    + +   +    + +        KL+    Q + 
Sbjct: 71  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI---VKCQKLTDDHVQFLI 127

Query: 401 LGTARGLAYLHFGAQPAIFHRDIKA 425
               RGL Y+H      I HRD+K 
Sbjct: 128 YQILRGLKYIH---SADIIHRDLKP 149

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 2e-17
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 15/139 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGDATFKH---EVEVIA-SVRH 346
           +F    ++G+G +G V+           A+K  K      D   +    E  V++ +  H
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
             L  +                 V + +  G +  H+   +  K         A     G
Sbjct: 63  PFLTHMFCTFQ-----TKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILG 115

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           L +LH      I +RD+K 
Sbjct: 116 LQFLH---SKGIVYRDLKL 131

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.0 bits (194), Expect = 5e-17
 Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 14/139 (10%)

Query: 291 RNFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVRH 346
           ++F     +G G +G V+      +G   A+K  K               E  +++ V H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
             ++ + G        +  Q  ++ D ++ G ++  L      +   P+ +  A      
Sbjct: 64  PFIIRMWGTFQ-----DAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLA 116

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           L YLH      I +RD+K 
Sbjct: 117 LEYLH---SKDIIYRDLKP 132

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.5 bits (195), Expect = 6e-17
 Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 14/138 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVRHV 347
            F R   +G G +G V        G+  A+K                 +E  ++ +V   
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
            LV L          +     +V + +  G ++ HL      + S P  +  A       
Sbjct: 102 FLVKLEFSFK-----DNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTF 154

Query: 408 AYLHFGAQPAIFHRDIKA 425
            YLH      + +RD+K 
Sbjct: 155 EYLH---SLDLIYRDLKP 169

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 7e-17
 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 16/134 (11%)

Query: 297 NIIGRGGYGNVYKG-LLPDGSEVALKRFKNCSAAGD-----ATFKHEVEVIASVRHVNLV 350
           + +G G +  VYK         VA+K+ K    +        T   E++++  + H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
            L                +V D M+     + +   N   L+    ++  L T +GL YL
Sbjct: 64  GLLDAFG-----HKSNISLVFDFMET--DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 116

Query: 411 HFGAQPAIFHRDIK 424
           H   Q  I HRD+K
Sbjct: 117 H---QHWILHRDLK 127

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 77.9 bits (191), Expect = 1e-16
 Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 12/134 (8%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLV 350
           ++     IG G +G +++G  L +  +VA+K       +     + E      +     +
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR--RSDAPQLRDEYRTYKLLAGCTGI 63

Query: 351 ALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYL 410
               Y       EG   ++V DL+  G   + L    G K S       A      +  +
Sbjct: 64  PNVYYFGQ----EGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 117

Query: 411 HFGAQPAIFHRDIK 424
           H   + ++ +RDIK
Sbjct: 118 H---EKSLVYRDIK 128

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 74.8 bits (183), Expect = 2e-16
 Identities = 20/139 (14%), Positives = 35/139 (25%), Gaps = 23/139 (16%)

Query: 297 NIIGRGGYGNVYKGLLPDGSEVALKRFK----------NCSAAGDATFKHEVEVIASVRH 346
            ++G G    V+        E  +K  K               GD  F       A    
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 347 VNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARG 406
             L  L+G  +            V     N  + + + A    ++       +       
Sbjct: 66  RALQKLQGLAV----------PKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEE 115

Query: 407 LAYLHFGAQPAIFHRDIKA 425
           +A  +      I H D+  
Sbjct: 116 VAKFY---HRGIVHGDLSQ 131

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 3e-15
 Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD---ATFKHEVEVIASVRHV 347
           +F    ++G+G +G V        G   A+K  +          A    E  V+ + RH 
Sbjct: 6   DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65

Query: 348 NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGL 407
            L AL+            +   V +    G ++ HL  S     +    +         L
Sbjct: 66  FLTALKYAFQ-----THDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSAL 118

Query: 408 AYLHFGAQPAIFHRDIKA 425
            YLH      + +RDIK 
Sbjct: 119 EYLH---SRDVVYRDIKL 133

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.2 bits (181), Expect = 3e-15
 Identities = 30/152 (19%), Positives = 49/152 (32%), Gaps = 18/152 (11%)

Query: 283 FDDIKKATRNFSRDN------IIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDA--T 333
           F  ++     F+          IG G  G V           VA+K+             
Sbjct: 3   FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62

Query: 334 FKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI-IVCDLMKNGSVYDHLFASNGPKLS 392
              E+ ++  V H N+++L         LE  Q + +V +LM               +L 
Sbjct: 63  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-----ELD 117

Query: 393 WPLRQSIALGTARGLAYLHFGAQPAIFHRDIK 424
                 +      G+ +LH      I HRD+K
Sbjct: 118 HERMSYLLYQMLCGIKHLH---SAGIIHRDLK 146

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 5e-15
 Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 18/135 (13%)

Query: 298 IIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDAT------FKHEVEVIASVR--HVN 348
           ++G GG+G+VY G+ + D   VA+K  +    +             EV ++  V      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           ++ L  +            +++ +  +            G  L   L +S        + 
Sbjct: 71  VIRLLDWFE-----RPDSFVLILERPEPVQDLFDFITERGA-LQEELARSFFWQVLEAVR 124

Query: 409 YLHFGAQPAIFHRDI 423
           + H      + HRDI
Sbjct: 125 HCH---NCGVLHRDI 136

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (176), Expect = 9e-15
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 13/137 (9%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVN 348
            + +   IG G YG V+K         VALKR +  +      ++   E+ ++  ++H N
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62

Query: 349 LVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
           +V L             +  +V +             +        + +S      +GL 
Sbjct: 63  IVRLHDVLH-----SDKKLTLVFEFCDQDLKKYFDSCNGDLD--PEIVKSFLFQLLKGLG 115

Query: 409 YLHFGAQPAIFHRDIKA 425
           + H      + HRD+K 
Sbjct: 116 FCHS---RNVLHRDLKP 129

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-14
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 26/149 (17%)

Query: 293 FSRDNI---------IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGD------ATFKH 336
           F ++N+         +G G +  V K      G + A K  K                + 
Sbjct: 3   FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62

Query: 337 EVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLR 396
           EV ++  ++H N++ L               I++ +L+  G ++D L       L+    
Sbjct: 63  EVSILKEIQHPNVITLHEVYE-----NKTDVILILELVAGGELFDFLA--EKESLTEEEA 115

Query: 397 QSIALGTARGLAYLHFGAQPAIFHRDIKA 425
                    G+ YLH      I H D+K 
Sbjct: 116 TEFLKQILNGVYYLH---SLQIAHFDLKP 141

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 1e-14
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 11/140 (7%)

Query: 292 NFSRDNIIGRGGYGNVYKG-LLPDGSEVALKRFK--NCSAAGDATFKHEVEVIASVRHVN 348
            + +   IG+G +G V+K      G +VALK+    N       T   E++++  ++H N
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70

Query: 349 LVALRGYCIATTQLEGHQR---IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTAR 405
           +V L   C          +    +V D  ++         +   K +    + +      
Sbjct: 71  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLN 128

Query: 406 GLAYLHFGAQPAIFHRDIKA 425
           GL Y+H   +  I HRD+KA
Sbjct: 129 GLYYIH---RNKILHRDMKA 145

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 69.5 bits (169), Expect = 9e-14
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 16/135 (11%)

Query: 292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNL 349
           ++     +GRG Y  V++ + + +  +V +K  K          K E++++ ++R   N+
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPNI 92

Query: 350 VALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAY 409
           + L                +V + + N              L+    +       + L Y
Sbjct: 93  ITLADIVKDPV---SRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDY 144

Query: 410 LHFGAQPAIFHRDIK 424
            H      I HRD+K
Sbjct: 145 CH---SMGIMHRDVK 156

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.4 bits (163), Expect = 6e-13
 Identities = 18/136 (13%), Positives = 45/136 (33%), Gaps = 13/136 (9%)

Query: 299 IGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRG--- 354
           +G G +  V+    + + + VA+K  +          + E++++  V   +         
Sbjct: 21  LGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 79

Query: 355 ------YCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLA 408
                       +      +++   +   ++   +       +     + I+     GL 
Sbjct: 80  NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 139

Query: 409 YLHFGAQPAIFHRDIK 424
           Y+H   +  I H DIK
Sbjct: 140 YMHR--RCGIIHTDIK 153

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 1e-12
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 19/141 (13%)

Query: 292 NFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCSAAGDAT----FKHEVEVIAS 343
           NF    ++G G YG V+          G   A+K  K  +    A      + E +V+  
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 344 VRHV-NLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALG 402
           +R    LV L             +  ++ D +  G ++ HL  S   + +    Q     
Sbjct: 85  IRQSPFLVTLHYAFQ-----TETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVGE 137

Query: 403 TARGLAYLHFGAQPAIFHRDI 423
               L +LH   +  I +RDI
Sbjct: 138 IVLALEHLH---KLGIIYRDI 155

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	425
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.94
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.92
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.92
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.91
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.91
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.91
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.91
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.91
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.91
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.9
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.9
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.9
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.9
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.9
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.9
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.9
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.89
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.89
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.89
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.89
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.89
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.89
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.89
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.88
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.88
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.88
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.88
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.87
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.87
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.87
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.87
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.86
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.85
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.85
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.85
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.84
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.84
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.83
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.83
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.82
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.81
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.67
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.65
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.47
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	92.36

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6e-27  Score=222.04  Aligned_cols=125  Identities=28%  Similarity=0.462  Sum_probs=112.1

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||+|.+.+++.||||+++.. ....++|.+|++++++++|||||+++|+|.     +++..++|
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-----~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceec-----cCCceEEE
Confidence            467778999999999999999888899999999753 344578999999999999999999999997     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++... ...++|..++.|+.|||+||+|||   +.+||||||||
T Consensus        79 ~E~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp  129 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAA  129 (263)
T ss_dssp             EECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSG
T ss_pred             EEecCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccch
Confidence            9999999999998653 356999999999999999999999   89999999997

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.9e-27  Score=225.37  Aligned_cols=125  Identities=27%  Similarity=0.445  Sum_probs=110.6

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||+|.+.+++.||||+++... ...++|.+|++++++++|||||+++|++.      .+..++|
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~------~~~~~iv   85 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIYII   85 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCEEE
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec------cCCeEEE
Confidence            4677789999999999999999888999999997533 34568999999999999999999999885      2356999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++.......++|..++.|+.|||+||.|||   +.+||||||||
T Consensus        86 ~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp  137 (272)
T d1qpca_          86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRA  137 (272)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccch
Confidence            99999999999886544456999999999999999999999   89999999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=2.7e-27  Score=227.46  Aligned_cols=127  Identities=28%  Similarity=0.453  Sum_probs=113.8

Q ss_pred             hcCcccceeecccCcccEEeeecC-CCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLP-DGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~-~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||+||+|... +|+.||||+++... ...++|.+|+++|++++|||||+++|++.     +++..+
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~   89 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFY   89 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSCE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEe-----eCCeeE
Confidence            456888899999999999999864 68899999997533 34568999999999999999999999997     556789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|.+++.......++|..++.|+.|||+||+|||   +.+||||||||
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp  143 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA  143 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCcccc
Confidence            9999999999999998766678999999999999999999999   88999999997

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=4.6e-27  Score=227.10  Aligned_cols=137  Identities=29%  Similarity=0.498  Sum_probs=112.7

Q ss_pred             cccHHHHHHHhcCc---------ccceeecccCcccEEeeecC-CCC---eeEEeeecCC-CccchHHHHHHHHHHhhCC
Q 048791          280 RFTFDDIKKATRNF---------SRDNIIGRGGYGNVYKGLLP-DGS---EVALKRFKNC-SAAGDATFKHEVEVIASVR  345 (425)
Q Consensus       280 ~f~~~ei~~at~~f---------~~~~~IG~G~fG~Vykg~l~-~g~---~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~  345 (425)
                      .++|+|+.+++++|         ...++||+|+||+||+|... +|+   .||||++... .....++|.+|+++|++++
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   85 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD   85 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence            34556666665544         34578999999999999863 333   5899998753 3344568999999999999


Q ss_pred             CCcccceeeEEeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          346 HVNLVALRGYCIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       346 H~NIV~l~g~~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||||+++|+|.     +++..++|||||++|+|.+++... .+.++|.+++.|+.|||+||+|||   +.+||||||||
T Consensus        86 HpnIv~l~g~~~-----~~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp  156 (299)
T d1jpaa_          86 HPNVIHLEGVVT-----KSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAA  156 (299)
T ss_dssp             CTTBCCEEEEEC-----SSSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CCCCccEEEEEe-----eCCEEEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCcccc
Confidence            999999999997     456789999999999999988653 346999999999999999999999   89999999997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.3e-26  Score=216.55  Aligned_cols=125  Identities=24%  Similarity=0.400  Sum_probs=112.3

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||+||+|+.++++.||||+++... ...++|.+|+.++++++|||||+++|+|.     +.+..++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~-----~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT-----KQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEC-----CSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEe-----eCCceEEE
Confidence            5788889999999999999999888999999998643 34578999999999999999999999997     45678999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++... ...++|..+.+|+.|||+||+|||   +.+|+||||||
T Consensus        78 ~Ey~~~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~  128 (258)
T d1k2pa_          78 TEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAA  128 (258)
T ss_dssp             EECCTTEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSG
T ss_pred             EEccCCCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccc
Confidence            9999999999998653 346899999999999999999999   88999999997

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.8e-26  Score=217.48  Aligned_cols=124  Identities=35%  Similarity=0.538  Sum_probs=107.8

Q ss_pred             hcCcccceeecccCcccEEeeecCCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||+||+|++.  ..||||+++..  +....++|.+|++++++++|||||+++|++.      .+..
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~------~~~~   78 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------APQL   78 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe------ccEE
Confidence            356778899999999999999874  36999999743  3344578999999999999999999999985      3457


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++... ...++|..++.|+.|||+||+|||   +.+||||||||
T Consensus        79 ~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp  132 (276)
T d1uwha_          79 AIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKS  132 (276)
T ss_dssp             EEEEECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCH
Confidence            9999999999999999753 346999999999999999999999   88999999997

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.7e-26  Score=219.35  Aligned_cols=125  Identities=29%  Similarity=0.463  Sum_probs=111.7

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||+||+|...+++.||||+++.. ....++|.+|++++++++|+|||+++|+|.      .++.++|
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~------~~~~~lv   89 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYIV   89 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCEEE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe------cCCeEEE
Confidence            568888999999999999999988889999999753 344578999999999999999999999984      2356999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.+++.......++|..++.|+.|||+||+|||   +.+|+||||||
T Consensus        90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp  141 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA  141 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccc
Confidence            99999999999997655557999999999999999999999   88999999997

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.8e-26  Score=217.02  Aligned_cols=125  Identities=22%  Similarity=0.412  Sum_probs=106.2

Q ss_pred             cCccccee-ecccCcccEEeeecC---CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNI-IGRGGYGNVYKGLLP---DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~-IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+. ||+|+||.||+|.+.   ++..||||+++... ....++|.+|+++|++++|||||+++|+|.      .+
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~------~~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AE   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SS
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec------cC
Confidence            34555564 999999999999753   45579999997543 334578999999999999999999999985      23


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..+|||||+++|+|.+++... +..++|..+..|+.|||+||+|||   +.+||||||||
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp  137 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAA  137 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             eEEEEEEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCch
Confidence            579999999999999998543 356999999999999999999999   89999999997

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-25  Score=215.89  Aligned_cols=126  Identities=25%  Similarity=0.319  Sum_probs=112.3

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      +.|...+.||+|+||+||+|+. .+|+.||||+++.......+.|.+|+++|++++|||||++++++.     +.+..++
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCeEEE
Confidence            3577788999999999999984 578999999998666666678999999999999999999999997     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++.+. ...+++.....|+.||++||.|||   +.+||||||||
T Consensus        87 vmEy~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp  138 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKA  138 (288)
T ss_dssp             EEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecCh
Confidence            99999999999998653 346999999999999999999999   89999999997

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-25  Score=214.67  Aligned_cols=126  Identities=24%  Similarity=0.339  Sum_probs=108.6

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||+||+|+. .+|+.||||+++... ....++|.+|++++++++|||||++++++.     +++..
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~-----~~~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeec-----cCcee
Confidence            35688889999999999999984 579999999997533 233467999999999999999999999997     46678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||||+++|+|.+++..  ...+++.....|+.||++||+|||   +.+||||||||
T Consensus        79 ~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp  131 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKP  131 (271)
T ss_dssp             EEEEECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             EEEEeccCCCcHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccH
Confidence            999999999999999853  346999999999999999999999   89999999997

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.1e-25  Score=212.84  Aligned_cols=124  Identities=23%  Similarity=0.407  Sum_probs=110.6

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||+||+|. ..+|+.||||+++.......+.+.+|++++++++|||||++++++.     +.+..++
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~i   94 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV   94 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEE-----ECCEEEE
Confidence            458888999999999999998 4579999999997544445578999999999999999999999997     4567899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++...   .+++.....|+.||+.||+|||   +.+||||||||
T Consensus        95 vmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp  144 (293)
T d1yhwa1          95 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKS  144 (293)
T ss_dssp             EEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcH
Confidence            99999999999988643   5999999999999999999999   89999999997

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.5e-25  Score=212.58  Aligned_cols=118  Identities=23%  Similarity=0.356  Sum_probs=101.1

Q ss_pred             eeecccCcccEEeeecC---CCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEEE
Q 048791          297 NIIGRGGYGNVYKGLLP---DGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIVC  371 (425)
Q Consensus       297 ~~IG~G~fG~Vykg~l~---~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV~  371 (425)
                      +.||+|+||+||+|.+.   .++.||||+++...  ....++|.+|+++|++++|||||+++|+|.      .+..+|||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~------~~~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec------cCCEEEEE
Confidence            57999999999999853   35689999997432  223468999999999999999999999985      23468999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          372 DLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       372 Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||+++|+|.+++...  ..++|..++.|+.|||+||+|||   +.+||||||||
T Consensus        87 E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp  135 (277)
T d1xbba_          87 EMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAA  135 (277)
T ss_dssp             ECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EcCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcc
Confidence            999999999999753  46999999999999999999999   88999999997

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.3e-26  Score=215.10  Aligned_cols=125  Identities=30%  Similarity=0.439  Sum_probs=107.6

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ++|...+.||+|+||.||+|.+ .|+.||||+++...  ..++|.+|++++++++|||||+++|+|..    +.+..++|
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~----~~~~~~lv   79 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYIV   79 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCEEE
T ss_pred             HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEe----cCCcEEEE
Confidence            4566778999999999999998 57899999997532  34689999999999999999999999863    23456999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||+++|+|.++|+......++|..+++|+.|||+||.|||   +.+||||||||
T Consensus        80 ~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp  131 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAA  131 (262)
T ss_dssp             ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccch
Confidence            99999999999997654446999999999999999999999   89999999997

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.91  E-value=5.7e-25  Score=216.95  Aligned_cols=127  Identities=19%  Similarity=0.345  Sum_probs=113.7

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||.||+++. .+|+.||||++........+.+.+|+.+|++++|||||++++++.     +++..+
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~   99 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE-----DDNEMV   99 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE-----ETTEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEE
Confidence            35788899999999999999984 579999999997655555678999999999999999999999987     466789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||||++|+|.+++... ...+++.....|+.||+.||+|||   +.+||||||||
T Consensus       100 ivmE~~~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp  152 (350)
T d1koaa2         100 MIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKP  152 (350)
T ss_dssp             EEECCCCSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEcCCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeech
Confidence            999999999999999653 346999999999999999999999   89999999997

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.3e-25  Score=210.70  Aligned_cols=126  Identities=28%  Similarity=0.453  Sum_probs=108.9

Q ss_pred             cCcccceeecccCcccEEeeecCCC-----CeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDG-----SEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g-----~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      +.|...++||+|+||.||+|.+.+.     ..||||+++... .....+|.+|++++++++|||||+++|++.     +.
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~-----~~   81 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-----KY   81 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe-----cC
Confidence            4577889999999999999986432     379999997533 333467999999999999999999999997     55


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++||||+++|++.+++... ...++|.+++.|+.|||+||+|||   +.+||||||||
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp  138 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAA  138 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CceEEEEEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhcc---ccccccCcccc
Confidence            6789999999999999988654 356999999999999999999999   89999999997

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1e-24  Score=207.51  Aligned_cols=126  Identities=29%  Similarity=0.420  Sum_probs=106.6

Q ss_pred             ccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          294 SRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      ...+.||+|+||+||+|.. .+++.||||++...  .....+.|.+|+++|++++|||||++++++..... .+...++|
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~-~~~~~~iv   90 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK-GKKCIVLV   90 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS-SCEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccc-cCCEEEEE
Confidence            3456799999999999985 56889999998643  33345679999999999999999999999865332 34567999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPA--IFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~--IiHRDLKp  425 (425)
                      |||+++|+|.+++...  ..+++.....++.||++||+|||   +.+  ||||||||
T Consensus        91 mE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp  142 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKC  142 (270)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCG
T ss_pred             EeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcCh
Confidence            9999999999999653  46999999999999999999999   655  99999997

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=208.98  Aligned_cols=125  Identities=22%  Similarity=0.337  Sum_probs=110.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC------ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS------AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~------~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      +.|...+.||+|+||+||+|.. .+|+.||||+++...      ....+.|.+|+.+|++++|||||++++++.     +
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-----~   84 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE-----N   84 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----E
Confidence            5688889999999999999985 579999999986422      122468999999999999999999999997     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..+|||||+++|+|.+++...  ..+++.....|+.||++||+|||   +.+||||||||
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp  141 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP  141 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             CCEEEEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhh---hcceeeccccc
Confidence            67889999999999999999653  36999999999999999999999   89999999997

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.7e-25  Score=215.69  Aligned_cols=126  Identities=23%  Similarity=0.331  Sum_probs=111.1

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .++|...+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+.+|++++|||||++++++.     +.+..
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-----~~~~~   79 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI   79 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEE-----CSSEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEE
Confidence            46788889999999999999984 579999999997533 333568999999999999999999999998     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQ-PAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~-~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++.+.  ..+++.....++.|+++||.|||   + .+||||||||
T Consensus        80 ~iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP  133 (322)
T d1s9ja_          80 SICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKP  133 (322)
T ss_dssp             EEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSG
T ss_pred             EEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCH
Confidence            9999999999999999653  35999999999999999999999   5 4899999998

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.8e-25  Score=210.40  Aligned_cols=132  Identities=20%  Similarity=0.262  Sum_probs=102.6

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||+||+++ ..+|+.||||.++...  ....+.|.+|++++++++|||||++++++...   ..+..
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~---~~~~~   80 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTTL   80 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC-------CE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeC---CCCEE
Confidence            568888999999999999998 4679999999997543  23346789999999999999999999998642   23457


Q ss_pred             EEEEecCCCCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcC--CCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFA--SNGPKLSWPLRQSIALGTARGLAYLHFG--AQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~--~~~~~L~~~~r~~Ia~~ia~gL~YLH~~--~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|.+++..  .....+++.....|+.||+.||.|||..  ...+||||||||
T Consensus        81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp  142 (269)
T d2java1          81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP  142 (269)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCG
T ss_pred             EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCch
Confidence            999999999999999864  2345799999999999999999999932  124699999997

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.3e-25  Score=207.40  Aligned_cols=125  Identities=27%  Similarity=0.435  Sum_probs=110.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++. .+|+.||||++...   .....+.+.+|++++++++|||||++++++.     +++.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-----DATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEE-----ECCE
Confidence            4588889999999999999985 57899999998632   1233467899999999999999999999997     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....|+.||++||+|||   +.+||||||||
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp  134 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCH---SKRVIHRDIKP  134 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             EEEEEeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeecc
Confidence            89999999999999999653  36999999999999999999999   89999999997

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=4e-25  Score=214.26  Aligned_cols=126  Identities=20%  Similarity=0.366  Sum_probs=106.6

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .+.|...+.||+|+||+||++.. .+|+.||||++.... ....+.|.+|+.+|++++|||||++++++.     +++..
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~-----~~~~~   82 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE-----SGGHL   82 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEE-----CSSEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEE
Confidence            35588889999999999999984 578999999997533 233457889999999999999999999987     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +|||||+++|+|.+++..  ...+++.....|+.||++||+|||   +.+||||||||
T Consensus        83 ~lvmE~~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp  135 (307)
T d1a06a_          83 YLIMQLVSGGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKP  135 (307)
T ss_dssp             EEEECCCCSCBHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEeccCCCcHHHhhhc--ccCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecc
Confidence            999999999999999964  346999999999999999999999   89999999997

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.91  E-value=1.8e-24  Score=213.53  Aligned_cols=126  Identities=20%  Similarity=0.327  Sum_probs=112.3

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||++. ..+|+.||||+++.......+.+.+|+++|++++|||||++++++.     +++..+|
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-----~~~~~~i  103 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-----DKYEMVL  103 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-----CSSEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEEE
Confidence            468888999999999999998 4579999999998655555678899999999999999999999987     5678899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|+|.+++.. ....+++.....|+.||++||+|||   +.+||||||||
T Consensus       104 vmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp  155 (352)
T d1koba_         104 ILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKP  155 (352)
T ss_dssp             EEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccccc
Confidence            9999999999988754 3346999999999999999999999   89999999997

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=1.4e-24  Score=210.61  Aligned_cols=124  Identities=27%  Similarity=0.379  Sum_probs=108.2

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      .|...+.||+|+||+||+|+ ..+|+.||||+++....   ...+.|.+|+++|++++|||||++++++.     +++..
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-----~~~~~   90 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHTA   90 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEE-----ECCEE
Confidence            37888999999999999998 46789999999975432   22357899999999999999999999997     45678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+++|+|..++...  ..++|..+..|+.||++||.|||   +.+||||||||
T Consensus        91 ~iv~E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp  143 (309)
T d1u5ra_          91 WLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKA  143 (309)
T ss_dssp             EEEEECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSG
T ss_pred             EEEEEecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCc
Confidence            9999999999998776543  46999999999999999999999   89999999997

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-24  Score=209.53  Aligned_cols=126  Identities=18%  Similarity=0.258  Sum_probs=110.8

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      .++|...+.||+|+||+||+|.. .+|+.||||.++... .....+.+|+++|++++|||||++++++.     +.+..+
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~-----~~~~~~   77 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE-----SMEELV   77 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE-----ETTEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEE
Confidence            45688889999999999999984 578999999997533 33456889999999999999999999987     456789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      |||||+++|+|.+++... ...+++.+...|+.||++||+|||   +.+||||||||
T Consensus        78 lvmE~~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp  130 (321)
T d1tkia_          78 MIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRP  130 (321)
T ss_dssp             EEECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccc
Confidence            999999999999999643 336999999999999999999999   89999999997

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.3e-24  Score=209.77  Aligned_cols=129  Identities=28%  Similarity=0.433  Sum_probs=111.5

Q ss_pred             HhcCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccc
Q 048791          289 ATRNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQ  361 (425)
Q Consensus       289 at~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~  361 (425)
                      ..++|...+.||+|+||+||+|+.      .+++.||||+++.... ...++|.+|++++++++|+||++++++|.    
T Consensus        11 p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~----   86 (301)
T d1lufa_          11 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA----   86 (301)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC----
T ss_pred             CHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec----
Confidence            456788999999999999999974      3567899999975433 33568999999999999999999999997    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASN----------------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIF  419 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~----------------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~Ii  419 (425)
                       ..+..++||||+++|+|.++++...                      ...++|..++.|+.|+|+||+|||   +.+||
T Consensus        87 -~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~iv  162 (301)
T d1lufa_          87 -VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV  162 (301)
T ss_dssp             -SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred             -cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeE
Confidence             4567899999999999999996421                      234899999999999999999999   89999


Q ss_pred             ecCCCC
Q 048791          420 HRDIKA  425 (425)
Q Consensus       420 HRDLKp  425 (425)
                      ||||||
T Consensus       163 HrDlKp  168 (301)
T d1lufa_         163 HRDLAT  168 (301)
T ss_dssp             CSCCSG
T ss_pred             eeEEcc
Confidence            999997

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.9e-24  Score=210.88  Aligned_cols=127  Identities=21%  Similarity=0.374  Sum_probs=105.6

Q ss_pred             cCcccceeecccCcccEEeeecCC------CCeeEEeeecCC-CccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD------GSEVALKRFKNC-SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~------g~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||+||+|+...      ...||||.+... .......|.+|+.+|.++ +|||||+++|++.     
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~-----  111 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT-----  111 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe-----
Confidence            568888999999999999998532      236999998643 334456899999999998 8999999999997     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNG---------------------PKLSWPLRQSIALGTARGLAYLHFGAQPAIFHR  421 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHR  421 (425)
                      +.+..++||||+++|+|.++|+....                     ..++|..++.|+.||++||+|||   +.+||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHR  188 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR  188 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence            45667999999999999999975421                     35899999999999999999999   8899999


Q ss_pred             CCCC
Q 048791          422 DIKA  425 (425)
Q Consensus       422 DLKp  425 (425)
                      ||||
T Consensus       189 DlKp  192 (325)
T d1rjba_         189 DLAA  192 (325)
T ss_dssp             TCSG
T ss_pred             cCch
Confidence            9997

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.2e-24  Score=208.87  Aligned_cols=127  Identities=31%  Similarity=0.512  Sum_probs=107.4

Q ss_pred             cCcccceeecccCcccEEeeecC-CCC--eeEEeeecCC-CccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP-DGS--EVALKRFKNC-SAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~-~g~--~VAVK~l~~~-~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|++. +|.  .||||+++.. .....++|.+|+++|.++ +|||||+++|+|.     +++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~-----~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-----ETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe-----cCC
Confidence            56777899999999999999864 343  5889988643 334456899999999999 7999999999998     566


Q ss_pred             eEEEEEecCCCCCHHHHHhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFAS--------------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~--------------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.++|+..              ....++|..+++++.|||+||.|||   +.+||||||||
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp  155 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAA  155 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCcccccccc
Confidence            789999999999999999753              2356999999999999999999999   89999999997

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=3.9e-24  Score=203.71  Aligned_cols=129  Identities=23%  Similarity=0.292  Sum_probs=111.3

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc---cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA---AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~---~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++ ..+|+.||||.++....   ...+.|.+|++++++++|||||++++++...+. .+..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~-~~~~   85 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP-AGPL   85 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECS-SSEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccC-CCce
Confidence            568888999999999999998 46799999999975332   234579999999999999999999999876433 3446


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+|||||+++|+|.+++...  ..++|.+...|+.||++||+|||   +.+||||||||
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP  139 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKP  139 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCccccC
Confidence            79999999999999988653  36999999999999999999999   89999999998

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-24  Score=206.75  Aligned_cols=125  Identities=20%  Similarity=0.254  Sum_probs=109.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...   ....+.+.+|++++++++|||||++++++.     +.+.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-----DDEK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE-----CSSE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE-----ECCE
Confidence            4688889999999999999984 579999999986421   223467999999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.|++.||+|||   +.+||||||||
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp  136 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKP  136 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             EEEEEEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCc
Confidence            89999999999999998653  46999999999999999999999   89999999997

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.7e-24  Score=206.36  Aligned_cols=122  Identities=25%  Similarity=0.449  Sum_probs=104.8

Q ss_pred             ceeecccCcccEEeeecCCC----CeeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEEE
Q 048791          296 DNIIGRGGYGNVYKGLLPDG----SEVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRIIV  370 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l~~g----~~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~LV  370 (425)
                      .++||+|+||+||+|.+.++    ..||||+++.. +....++|.+|+++|++++|||||+++|+|..    .++..++|
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~----~~~~~~lv  107 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGSPLVV  107 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE----TTTEEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEe----cCCceEEE
Confidence            47899999999999986432    36899999753 34445789999999999999999999999874    34578999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          371 CDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       371 ~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||++|+|.+++... ...++|..+++++.|+|+||.|||   +++|+||||||
T Consensus       108 ~E~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~  158 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAA  158 (311)
T ss_dssp             EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             EEEeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccH
Confidence            9999999999998653 456889999999999999999999   89999999997

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.4e-24  Score=206.32  Aligned_cols=125  Identities=28%  Similarity=0.536  Sum_probs=105.2

Q ss_pred             cCcccceeecccCcccEEeeec-CCCC----eeEEeeecCC-CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGS----EVALKRFKNC-SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEG  364 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~----~VAVK~l~~~-~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~  364 (425)
                      .+|...++||+|+||+||+|.. .+|+    .||||+++.. +....++|.+|++++++++|||||+++|+|..      
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~------   82 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------   82 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES------
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence            3588889999999999999985 3454    5899988743 34456789999999999999999999999963      


Q ss_pred             ceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          365 HQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       365 ~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +..++++||+++|+|.+++... ...++|..+++|+.|||+||+|||   +.+||||||||
T Consensus        83 ~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp  139 (317)
T d1xkka_          83 STVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAA  139 (317)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CCeeEEEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchh
Confidence            3468899999999999988764 456999999999999999999999   88999999997

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.90  E-value=7.8e-24  Score=202.13  Aligned_cols=125  Identities=27%  Similarity=0.364  Sum_probs=109.7

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCcc---------chHHHHHHHHHHhhCC-CCcccceeeEEeec
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAA---------GDATFKHEVEVIASVR-HVNLVALRGYCIAT  359 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~---------~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~  359 (425)
                      ++|...+.||+|+||+||+++ ..+|+.||||+++.....         ..+.+.+|+.++++++ |||||++++++.  
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~--   80 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE--   80 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE--
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc--
Confidence            578889999999999999998 467999999999643211         1246889999999997 999999999997  


Q ss_pred             cccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         +++..+||||||++|+|.+++...  ..+++.+...++.||++||+|||   +.+||||||||
T Consensus        81 ---~~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp  138 (277)
T d1phka_          81 ---TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKP  138 (277)
T ss_dssp             ---CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             ---cCcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HcCCccccccc
Confidence               567889999999999999999653  46999999999999999999999   89999999997

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.6e-24  Score=204.27  Aligned_cols=127  Identities=31%  Similarity=0.453  Sum_probs=103.9

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHH--HHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEV--EVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev--~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      +.+...+.||+|+||.||+|++ +|+.||||+++..   ..+++..|.  ..+.+++|||||+++|+|..... .....+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~-~~~~~~   77 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLW   77 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCC-cceEEE
Confidence            3466778999999999999997 6899999999642   234444454  45567899999999999986432 234689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFG-----AQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~-----~~~~IiHRDLKp  425 (425)
                      +|||||++|+|.++|++.   .++|..+.+++.|+|+||+|||..     .+++||||||||
T Consensus        78 lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp  136 (303)
T d1vjya_          78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS  136 (303)
T ss_dssp             EEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCG
T ss_pred             EEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCc
Confidence            999999999999999753   599999999999999999999943     247999999997

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.8e-24  Score=201.68  Aligned_cols=125  Identities=26%  Similarity=0.374  Sum_probs=107.3

Q ss_pred             cCcccceeecccCcccEEeeecCC----CCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPD----GSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~----g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||.||+|+...    +..||||.++.... ...+.|.+|++++++++|||||+++|++.      .+
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------~~   80 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------EN   80 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------SS
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cC
Confidence            467788999999999999998532    35689999875433 33467999999999999999999999984      34


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++... ...++|..++.++.||++||.|||   +.+||||||||
T Consensus        81 ~~~iv~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp  136 (273)
T d1mp8a_          81 PVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAA  136 (273)
T ss_dssp             SCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             eEEEEEEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccch
Confidence            579999999999999988653 356999999999999999999999   89999999997

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.4e-24  Score=206.29  Aligned_cols=127  Identities=24%  Similarity=0.401  Sum_probs=109.5

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||+|++      .+++.||||+++.... ....+|.+|+++++++ +|||||+++|+|.     
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~-----   97 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT-----   97 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe-----
Confidence            5677789999999999999974      3567899999975443 3446799999999999 6999999999997     


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN----------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~----------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++..++||||+++|+|.++++...                ...++|..++.|+.|||+||+|||   +.+||||||||
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp  173 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAA  173 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccccc
Confidence            4566899999999999999997532                235999999999999999999999   89999999997

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.3e-23  Score=202.34  Aligned_cols=126  Identities=28%  Similarity=0.420  Sum_probs=107.7

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||+||+|+ ..+|+.||||+++...  ....+++.+|++++++++|||||++++++.     +++..
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~-----~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccc-----cccce
Confidence            578889999999999999998 4679999999996432  233578999999999999999999999997     46678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++||||+. |++.+++.......+++.....++.||++||+|||   +.+||||||||
T Consensus        77 ~iv~e~~~-~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKp  130 (298)
T d1gz8a_          77 YLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKP  130 (298)
T ss_dssp             EEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             eEEEeecC-CchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCc
Confidence            99999997 55666665555667999999999999999999999   89999999997

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.7e-24  Score=203.15  Aligned_cols=125  Identities=28%  Similarity=0.418  Sum_probs=99.4

Q ss_pred             cCcccceeecccCcccEEeeec--CCC--CeeEEeeecCCC---ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL--PDG--SEVALKRFKNCS---AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l--~~g--~~VAVK~l~~~~---~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||+|++  .++  ..||||+++...   ....++|.+|+++|++++|||||+++|++..     
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-----   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-----   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----
Confidence            4577788999999999999985  233  378999997532   2334689999999999999999999999952     


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +..++||||+++|++.+++... ...++|..++.++.|||+||.|||   +.+|+||||||
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp  139 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAA  139 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             -cchheeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecH
Confidence             3468999999999999988653 345999999999999999999999   89999999997

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.4e-24  Score=204.40  Aligned_cols=127  Identities=24%  Similarity=0.393  Sum_probs=109.3

Q ss_pred             cCcccceeecccCcccEEeeecC------CCCeeEEeeecCCC-ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP------DGSEVALKRFKNCS-AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~------~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||+|.+.      +++.||||+++... ......|.+|++++++++|+|||+++|+|.     .
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-----~   94 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS-----Q   94 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC-----S
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe-----c
Confidence            56778899999999999999852      36789999997543 333467999999999999999999999997     4


Q ss_pred             CceEEEEEecCCCCCHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFAS--------NGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~--------~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..++||||+++|+|.++++..        ....++|..+.+|+.|+|+||.|||   +.+||||||||
T Consensus        95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~  161 (308)
T d1p4oa_          95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAA  161 (308)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSG
T ss_pred             CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcC
Confidence            56789999999999999998642        2345899999999999999999999   88999999997

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=2.5e-23  Score=202.22  Aligned_cols=125  Identities=22%  Similarity=0.335  Sum_probs=109.9

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||+||+++. .+|+.||||+++..   .....+.+.+|+.++++++|||||++++++.     +.+.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-----DAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-----CSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEe-----eCCe
Confidence            5688889999999999999984 57999999999642   1233467899999999999999999999997     5678


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp  132 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKP  132 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCG
T ss_pred             eeeEeeecCCcccccccccc--ccccccHHHHHHHHHHHhhhhhc---cCcEEccccCc
Confidence            89999999999999988653  45889999999999999999999   99999999997

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-23  Score=202.20  Aligned_cols=127  Identities=24%  Similarity=0.368  Sum_probs=103.6

Q ss_pred             cCcccceeecccCcccEEeeecC--------CCCeeEEeeecCCCc-cchHHHHHHHHHHhhC-CCCcccceeeEEeecc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLP--------DGSEVALKRFKNCSA-AGDATFKHEVEVIASV-RHVNLVALRGYCIATT  360 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~--------~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~  360 (425)
                      ++|...+.||+|+||.||+|+..        ++..||||+++.... ....+|.+|+..+.++ +|||||+++|+|.   
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~---   89 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT---   89 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccc---
Confidence            45777899999999999999742        235799999975433 4457899999999988 8999999999997   


Q ss_pred             ccCCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          361 QLEGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       361 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                        +.+..++||||+++|+|.+++....              ...++|..++.++.|||+||+|||   +.+||||||||
T Consensus        90 --~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp  163 (299)
T d1fgka_          90 --QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAA  163 (299)
T ss_dssp             --SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred             --cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecc
Confidence              4567899999999999999997542              245999999999999999999999   89999999997

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2e-23  Score=204.68  Aligned_cols=125  Identities=22%  Similarity=0.277  Sum_probs=110.5

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++ ..+|+.||||+++..   .....+.+.+|+.+|++++|||||++++++.     +.+.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-----~~~~   79 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-----THDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-----CSSE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec-----cccc
Confidence            568889999999999999998 467999999999642   1233467899999999999999999999997     5678


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|||||++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP  133 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKL  133 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             cccceeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhh---hcCccccccCH
Confidence            89999999999999998653  36899999999999999999999   99999999997

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.4e-23  Score=202.89  Aligned_cols=127  Identities=18%  Similarity=0.269  Sum_probs=107.4

Q ss_pred             hcCcccc-eeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhC-CCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRD-NIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~-~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|... ++||+|+||+||+|. ..+|+.||||+++.     ...+.+|++++.++ +|||||++++++.+... ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~-~~~~   83 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA-GRKC   83 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET-TEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeccc-CCCE
Confidence            3567654 569999999999998 46799999999964     24678899987655 89999999998864221 2456


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++|||||++|+|.+++.......+++.+...|+.||++||+|||   +.+||||||||
T Consensus        84 ~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp  139 (335)
T d2ozaa1          84 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKP  139 (335)
T ss_dssp             EEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCccccccc
Confidence            799999999999999997655567999999999999999999999   89999999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=3.7e-23  Score=197.53  Aligned_cols=125  Identities=24%  Similarity=0.321  Sum_probs=108.7

Q ss_pred             cCcccceeecccCcccEEeeecCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||+||+|+..+|+.||||+++...  ....+.|.+|+.+|++++|||||++++++.     ..+..+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~~~   76 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-----TKKRLV   76 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-----CSSCEE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecc-----cCCcee
Confidence            5688889999999999999998899999999996533  223468999999999999999999999997     556789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++||+.++.+..+..  ....+++.....|+.||++||+|||   +.+||||||||
T Consensus        77 i~~e~~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp  128 (286)
T d1ob3a_          77 LVFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKP  128 (286)
T ss_dssp             EEEECCSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             EEEEeehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCC
Confidence            9999998776666553  3457999999999999999999999   88999999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3e-23  Score=199.53  Aligned_cols=128  Identities=22%  Similarity=0.394  Sum_probs=105.1

Q ss_pred             cCcccceeecccCcccEEeeec------CCCCeeEEeeecCCC-ccchHHHHHHHHHHhhC-CCCcccceeeEEeecccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL------PDGSEVALKRFKNCS-AAGDATFKHEVEVIASV-RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l------~~g~~VAVK~l~~~~-~~~~~~f~~Ev~il~~l-~H~NIV~l~g~~~~~~~~  362 (425)
                      ++|...+.||+|+||.||+|..      .+++.||||+++... ....++|.+|+.++.++ +|+|||.+.+++..    
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~----   88 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK----   88 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeecc----
Confidence            5688889999999999999973      235689999997533 34456788999988887 68999999999864    


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASN--------------GPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~--------------~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +++..++||||+++|+|.++++...              ...++|..++.|+.|||+||.|||   +.+||||||||
T Consensus        89 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp  162 (299)
T d1ywna1          89 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA  162 (299)
T ss_dssp             TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCc
Confidence            3456799999999999999997532              235899999999999999999999   89999999997

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.2e-23  Score=199.75  Aligned_cols=125  Identities=20%  Similarity=0.289  Sum_probs=107.6

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHHHHHHh-hCCCCcccceeeEEeeccccCCc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHEVEVIA-SVRHVNLVALRGYCIATTQLEGH  365 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~Ev~il~-~l~H~NIV~l~g~~~~~~~~~~~  365 (425)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...   ....+.+..|+.++. .++|||||++++++.     +++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~-----~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ-----TKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE-----CSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEc-----cCC
Confidence            5788899999999999999984 579999999996421   223456778887766 689999999999997     567


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp  131 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKL  131 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCG
T ss_pred             ceeEEEeecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcc
Confidence            789999999999999999653  35899999999999999999999   88999999997

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=1.4e-22  Score=199.64  Aligned_cols=125  Identities=22%  Similarity=0.289  Sum_probs=110.0

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCC---CccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC---SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~---~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      ++|...+.||+|+||.||+++. .+|+.||||+++..   .....+.+.+|+.+|++++|||||++++++.     ....
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-----DNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccc-----cccc
Confidence            4688889999999999999985 57999999998632   1223467899999999999999999999987     5667


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+++|+|.+++...  ..+++.....|+.||++||.|||   +.+||||||||
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP  169 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKP  169 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             cccccccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCH
Confidence            89999999999999999653  36999999999999999999999   89999999997

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.5e-23  Score=196.76  Aligned_cols=120  Identities=27%  Similarity=0.309  Sum_probs=99.5

Q ss_pred             ceeecccCcccEEeeec-CCCCeeEEeeecCCCcc-----chHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          296 DNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAA-----GDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       296 ~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~-----~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      .++||+|+||+||+|+. .+|+.||||+++.....     ..+.+.+|++++++++|||||++++++.     .++..++
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~-----~~~~~~i   77 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG-----HKSNISL   77 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC-----CTTCCEE
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeec-----cCCceee
Confidence            47899999999999985 56999999999643221     1356899999999999999999999997     4566899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||++++++.....  ....+++.....++.||++||+|||   +.+||||||||
T Consensus        78 vmE~~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp  128 (299)
T d1ua2a_          78 VFDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKP  128 (299)
T ss_dssp             EEECCSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             hhhhhcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCc
Confidence            999999877665542  3456999999999999999999999   89999999997

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.87  E-value=2.6e-22  Score=198.71  Aligned_cols=125  Identities=25%  Similarity=0.316  Sum_probs=105.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCC---ccchHHHHHH---HHHHhhCCCCcccceeeEEeeccccC
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCS---AAGDATFKHE---VEVIASVRHVNLVALRGYCIATTQLE  363 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~---~~~~~~f~~E---v~il~~l~H~NIV~l~g~~~~~~~~~  363 (425)
                      ++|...+.||+|+||.||+|+. .+|+.||||++....   ......+.+|   +.+++.++|||||++++++.     +
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~-----~   78 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-----T   78 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE-----C
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEE-----E
Confidence            5788899999999999999984 579999999985321   1222334444   67777888999999999987     5


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..++||||+++|+|.+++...  ..+++.....++.||+.||+|||   +.+||||||||
T Consensus        79 ~~~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP  135 (364)
T d1omwa3          79 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKP  135 (364)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             CCEEEEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHH---HCCccceeecc
Confidence            66789999999999999999653  46899999999999999999999   89999999997

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.2e-22  Score=190.89  Aligned_cols=125  Identities=22%  Similarity=0.326  Sum_probs=109.4

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      ++|...+.||+|+||+||+|+ ..+|+.||||+++...  ....+.+.+|+.++++++|+|||++.+++.     .....
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~-----~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccc-----cccce
Confidence            468888999999999999999 4678999999996432  233578999999999999999999999997     56678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++|+||+.++++..++..  .+.+++..+..++.|+++||+|||   +.+||||||||
T Consensus        77 ~iv~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP  129 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKP  129 (292)
T ss_dssp             EEEEECCSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             eEEeeecccccccccccc--ccccchhHHHHHHHHHHHHHHHhh---cCCEeeecccC
Confidence            999999999988887753  356899999999999999999999   89999999997

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.8e-22  Score=195.85  Aligned_cols=129  Identities=22%  Similarity=0.347  Sum_probs=104.9

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc-cchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceE
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA-AGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQR  367 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~-~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~  367 (425)
                      +.+|...+.||+|+||+||+|+ ..+|+.||||+++.... ...+.+.+|+++|++++|+|||++++++..... .....
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~-~~~~~   85 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI-EQMKD   85 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST-TTCCC
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccc-cccce
Confidence            3568888999999999999998 56899999999975432 334678999999999999999999999875433 22234


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          368 IIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       368 ~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ++++||+.+|+|.+++...   .+++.....++.||++||+|||   +.+||||||||
T Consensus        86 ~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp  137 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKP  137 (345)
T ss_dssp             EEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             EEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCc
Confidence            5555677799999999643   5999999999999999999999   89999999997

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.4e-22  Score=196.93  Aligned_cols=130  Identities=22%  Similarity=0.356  Sum_probs=110.8

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCce
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQ  366 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~  366 (425)
                      .++|...+.||+|+||+||+|+ ..+|+.||||+++...  ....+.+.+|+++|++++|+|+|++++++......+...
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            4578889999999999999998 5689999999997533  233457899999999999999999999987554444455


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++++||+.+|+|.+++..   +.+++.....|+.||+.||+|||   +.+||||||||
T Consensus        97 ~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp  149 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKP  149 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             eEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCC
Confidence            6777888899999999843   35999999999999999999999   89999999997

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4e-22  Score=196.02  Aligned_cols=127  Identities=24%  Similarity=0.349  Sum_probs=101.8

Q ss_pred             CcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccc-cCCceEEE
Q 048791          292 NFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ-LEGHQRII  369 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~-~~~~~~~L  369 (425)
                      +|...++||+|+||+||+|+. .+|+.||||+++....    .+.+|+++|++++|+|||++++++..... ......+|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            467778999999999999995 5799999999975432    23479999999999999999999865432 12345789


Q ss_pred             EEecCCCCCHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFA-SNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~-~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+++|.+...... .....+++.....|+.||++||+|||   +.+||||||||
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp  150 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKP  150 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCG
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCc
Confidence            9999986644433321 23456999999999999999999999   89999999997

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.85  E-value=9.6e-22  Score=191.25  Aligned_cols=121  Identities=20%  Similarity=0.343  Sum_probs=105.5

Q ss_pred             cCcccceeecccCcccEEeeec-CCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||+||+|+. .+|+.||||+++...   .+++.+|+++|.+++ |+||+++++++...   .....+
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~---~~~~~~  108 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDP---VSRTPA  108 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECT---TTCSEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEec---CCCcee
Confidence            5688899999999999999984 679999999997532   467899999999996 99999999998642   234689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+++|+|..+.     +.+++.....|+.||++||+|||   +.+||||||||
T Consensus       109 ~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp  157 (328)
T d3bqca1         109 LVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKP  157 (328)
T ss_dssp             EEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred             EEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHh---hcccccccccc
Confidence            999999999997654     35999999999999999999999   99999999997

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.6e-22  Score=190.80  Aligned_cols=125  Identities=20%  Similarity=0.370  Sum_probs=105.9

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCc------cchHHHHHHHHHHhhCC--CCcccceeeEEeeccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSA------AGDATFKHEVEVIASVR--HVNLVALRGYCIATTQ  361 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~------~~~~~f~~Ev~il~~l~--H~NIV~l~g~~~~~~~  361 (425)
                      ++|...+.||+|+||.||+|+ ..+|+.||||+++....      ....++.+|++++++++  |||||++++++.    
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~----   79 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE----   79 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE----
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEe----
Confidence            468888999999999999998 46799999999864211      11235778999999996  899999999987    


Q ss_pred             cCCceEEEEEecCCC-CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKN-GSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~-GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +.+..++||||+.+ +++.+++...  ..+++.....++.||++||+|||   +.+||||||||
T Consensus        80 -~~~~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp  138 (273)
T d1xwsa_          80 -RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKD  138 (273)
T ss_dssp             -CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred             -eCCeEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcc
Confidence             56678999999975 6788877543  46999999999999999999999   89999999997

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.6e-21  Score=187.58  Aligned_cols=132  Identities=24%  Similarity=0.335  Sum_probs=105.4

Q ss_pred             hcCcccceeecccCcccEEeeec-CC-CCeeEEeeecCC--CccchHHHHHHHHHHhhC---CCCcccceeeEEeecccc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PD-GSEVALKRFKNC--SAAGDATFKHEVEVIASV---RHVNLVALRGYCIATTQL  362 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~-g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l---~H~NIV~l~g~~~~~~~~  362 (425)
                      .++|...+.||+|+||+||+++. .+ ++.||||+++..  .......+.+|+.+++.+   +|||||++++++......
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46788899999999999999984 34 678999998632  222234677888877765   799999999998754433


Q ss_pred             CCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          363 EGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       363 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .....++++||+++|++..... .....+++.....|+.||+.||+|||   +.+||||||||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp  144 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKP  144 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             cCceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCc
Confidence            4557899999999777654443 34566999999999999999999999   89999999997

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.9e-21  Score=190.62  Aligned_cols=129  Identities=22%  Similarity=0.312  Sum_probs=101.6

Q ss_pred             hcCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCc
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGH  365 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~  365 (425)
                      .++|...+.||+|+||+||+|. ..+|+.||||+++...  ....+.+.+|+++|++++|||||++++++...... ...
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            3578888999999999999998 4679999999997432  23346789999999999999999999999754322 233


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          366 QRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       366 ~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..++||||+ +++|..+...   ..+++.....|+.||+.||+|||   +.+||||||||
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp  149 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKP  149 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             eEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCc
Confidence            569999999 4677776643   35999999999999999999999   89999999997

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.6e-21  Score=186.26  Aligned_cols=131  Identities=24%  Similarity=0.313  Sum_probs=104.6

Q ss_pred             hcCcccceeecccCcccEEeeec-CCCCeeEEeeecCC--CccchHHHHHHHHHHhhCCCCcccceeeEEeeccc---cC
Q 048791          290 TRNFSRDNIIGRGGYGNVYKGLL-PDGSEVALKRFKNC--SAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQ---LE  363 (425)
Q Consensus       290 t~~f~~~~~IG~G~fG~Vykg~l-~~g~~VAVK~l~~~--~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~---~~  363 (425)
                      .++|...+.||+|+||+||+|+. .+|+.||||++...  .....+++.+|+++|++++|+|++++++.+.....   ..
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36788889999999999999984 68999999998642  23334678999999999999999999999865322   12


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .+..++||||++++.+..+.  .....++......|+.||++||.|||   +.+||||||||
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp  145 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKA  145 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             CceEEEEEeccCCCccchhh--hcccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCc
Confidence            34679999999977766544  33456899999999999999999999   89999999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=8.3e-21  Score=182.15  Aligned_cols=124  Identities=23%  Similarity=0.357  Sum_probs=103.5

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCCcccceeeEEeeccccCCceEEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHVNLVALRGYCIATTQLEGHQRII  369 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~~~~~~~L  369 (425)
                      ++|...+.||+|+||.||+|. ..+|+.||||.+.....  .+++..|++++++++|+|+|..++.+..    +++..++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~----~~~~~~i   80 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNVM   80 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEE----ETTEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEe----cCCEEEE
Confidence            358888999999999999998 46789999999875332  3468899999999998887777766654    5667899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          370 VCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       370 V~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ||||+. |++.+.+... ...+++..+..++.|+++||+|||   +.+||||||||
T Consensus        81 vme~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp  131 (299)
T d1ckia_          81 VMELLG-PSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKP  131 (299)
T ss_dssp             EEECCC-CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred             EEEEcC-Cchhhhhhhc-cCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCH
Confidence            999995 6776666543 346999999999999999999999   89999999997

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=5.1e-21  Score=188.40  Aligned_cols=127  Identities=21%  Similarity=0.285  Sum_probs=104.1

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCC--ccchHHHHHHHHHHhhCCCCcccceeeEEeecccc-CCce
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCS--AAGDATFKHEVEVIASVRHVNLVALRGYCIATTQL-EGHQ  366 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~--~~~~~~f~~Ev~il~~l~H~NIV~l~g~~~~~~~~-~~~~  366 (425)
                      ++|...++||+|+||+||+|. ..+|+.||||+++...  ......+.+|+.++++++|||||++++++...... ....
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            568888999999999999998 4579999999997532  23345789999999999999999999998754332 3468


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          367 RIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       367 ~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      .++||||+.+ ++.+.+.    ..+++.....++.||+.||+|||   +.+|+||||||
T Consensus        97 ~~iv~Ey~~~-~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP  147 (355)
T d2b1pa1          97 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP  147 (355)
T ss_dssp             EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred             eEEEEeccch-HHHHhhh----cCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCc
Confidence            8999999975 4555553    35899999999999999999999   89999999997

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.82  E-value=2.5e-20  Score=178.64  Aligned_cols=123  Identities=23%  Similarity=0.314  Sum_probs=105.9

Q ss_pred             cCcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCC-CcccceeeEEeeccccCCceEE
Q 048791          291 RNFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRH-VNLVALRGYCIATTQLEGHQRI  368 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H-~NIV~l~g~~~~~~~~~~~~~~  368 (425)
                      ++|...+.||+|+||+||+|+ ..+|+.||||.++...  ..+.+.+|++.+..++| +|++.+.++..     ++...+
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~~~~   77 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-----EGLHNV   77 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-----ETTEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEee-----cCCccE
Confidence            568889999999999999998 4578999999986432  23467889999999975 89999999886     566789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          369 IVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       369 LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      +||||+ +|+|.+++... ...+++.....|+.|++.||+|||   +.+||||||||
T Consensus        78 ~vme~~-~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp  129 (293)
T d1csna_          78 LVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKP  129 (293)
T ss_dssp             EEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCG
T ss_pred             EEEEec-CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCc
Confidence            999999 58999988653 346999999999999999999999   99999999997

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.2e-21  Score=184.73  Aligned_cols=125  Identities=25%  Similarity=0.324  Sum_probs=106.4

Q ss_pred             cCcccceeecccCcccEEeeec----CCCCeeEEeeecCCC----ccchHHHHHHHHHHhhCCC-CcccceeeEEeeccc
Q 048791          291 RNFSRDNIIGRGGYGNVYKGLL----PDGSEVALKRFKNCS----AAGDATFKHEVEVIASVRH-VNLVALRGYCIATTQ  361 (425)
Q Consensus       291 ~~f~~~~~IG~G~fG~Vykg~l----~~g~~VAVK~l~~~~----~~~~~~f~~Ev~il~~l~H-~NIV~l~g~~~~~~~  361 (425)
                      ++|...+.||+|+||+||+++.    .+|+.||||.++...    ....+.+.+|++++++++| +||+++++++.    
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~----   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE----
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeec----
Confidence            5688899999999999999973    358899999986422    1234578899999999976 79999999987    


Q ss_pred             cCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          362 LEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       362 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                       +....++||||+++|+|.+++...  ..+.......++.||+.||+|||   +.+||||||||
T Consensus       100 -~~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp  157 (322)
T d1vzoa_         100 -TETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKL  157 (322)
T ss_dssp             -ETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCG
T ss_pred             -cCCceeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCc
Confidence             456789999999999999999654  34678888899999999999999   89999999997

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=6.5e-17  Score=158.23  Aligned_cols=128  Identities=16%  Similarity=0.210  Sum_probs=99.1

Q ss_pred             CcccceeecccCcccEEeee-cCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-----------CCcccceeeEEeec
Q 048791          292 NFSRDNIIGRGGYGNVYKGL-LPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-----------HVNLVALRGYCIAT  359 (425)
Q Consensus       292 ~f~~~~~IG~G~fG~Vykg~-l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-----------H~NIV~l~g~~~~~  359 (425)
                      +|...+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+.++.+++           |+|||++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            37888999999999999998 4679999999997532 23457888999988875           47899999887643


Q ss_pred             cccCCceEEEEEecCCCC-CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          360 TQLEGHQRIIVCDLMKNG-SVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       360 ~~~~~~~~~LV~Ey~~~G-sL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                         .....+++++++..+ +............+++.....++.||++||+|||+  ..+|+||||||
T Consensus        93 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp  154 (362)
T d1q8ya_          93 ---GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKP  154 (362)
T ss_dssp             ---ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSG
T ss_pred             ---cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCCh
Confidence               233556666666544 33444444555678999999999999999999992  37899999997

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.65  E-value=1.1e-16  Score=143.08  Aligned_cols=111  Identities=12%  Similarity=0.162  Sum_probs=86.3

Q ss_pred             ccceeecccCcccEEeeecCCCCeeEEeeecCCCc------------------cchHHHHHHHHHHhhCCCCcccceeeE
Q 048791          294 SRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSA------------------AGDATFKHEVEVIASVRHVNLVALRGY  355 (425)
Q Consensus       294 ~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~------------------~~~~~f~~Ev~il~~l~H~NIV~l~g~  355 (425)
                      ..++.||+|+||.||+|...+|+.||||.++....                  .....+..|...+.+++|.+++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            35689999999999999988899999998753110                  001234568889999999999988765


Q ss_pred             EeeccccCCceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 048791          356 CIATTQLEGHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHFGAQPAIFHRDIKA  425 (425)
Q Consensus       356 ~~~~~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~~~~~~IiHRDLKp  425 (425)
                      ..         .+++|||++++.+.+         +++.....++.|+++||+|||   +.+|+||||||
T Consensus        83 ~~---------~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP  131 (191)
T d1zara2          83 EG---------NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQ  131 (191)
T ss_dssp             ET---------TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCST
T ss_pred             cC---------CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHh---hCCEEEccCCh
Confidence            31         279999998765432         334445679999999999999   89999999998

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.47  E-value=0.0049  Score=54.75  Aligned_cols=115  Identities=10%  Similarity=0.002  Sum_probs=74.7

Q ss_pred             HHHHHhcCcccceeecccCcccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCC-CCcccceeeEEeeccccC
Q 048791          285 DIKKATRNFSRDNIIGRGGYGNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVR-HVNLVALRGYCIATTQLE  363 (425)
Q Consensus       285 ei~~at~~f~~~~~IG~G~fG~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~-H~NIV~l~g~~~~~~~~~  363 (425)
                      |+.+-..+|...+..+-++...||+... +++.+.||+...........+.+|...+..++ +--+.+++.+..     .
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~-----~   81 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER-----H   81 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----E
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEe-----c
Confidence            4455555665444433333467998875 45667788876443333446788888887764 434567777665     3


Q ss_pred             CceEEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 048791          364 GHQRIIVCDLMKNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLHF  412 (425)
Q Consensus       364 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH~  412 (425)
                      ++..++|||+.++..+.+....       ......++.++++.|+.||.
T Consensus        82 ~~~~~lv~~~l~G~~~~~~~~~-------~~~~~~~~~~l~~~l~~lH~  123 (263)
T d1j7la_          82 DGWSNLLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             TTEEEEEEECCSSEEHHHHTTT-------CSCHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEEecccccccccccc-------cccHHHHHHHHHHHHHHHhc
Confidence            4577999999999888665421       12234578889999999993

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=92.36  E-value=0.17  Score=43.91  Aligned_cols=96  Identities=10%  Similarity=0.034  Sum_probs=62.4

Q ss_pred             eecccCc-ccEEeeecCCCCeeEEeeecCCCccchHHHHHHHHHHhhCCCC--cccceeeEEeeccccCCceEEEEEecC
Q 048791          298 IIGRGGY-GNVYKGLLPDGSEVALKRFKNCSAAGDATFKHEVEVIASVRHV--NLVALRGYCIATTQLEGHQRIIVCDLM  374 (425)
Q Consensus       298 ~IG~G~f-G~Vykg~l~~g~~VAVK~l~~~~~~~~~~f~~Ev~il~~l~H~--NIV~l~g~~~~~~~~~~~~~~LV~Ey~  374 (425)
                      .+..|.. ..||+...++|..+.+|.-....   ...+..|...++.+...  .+.+++++..     .++..++||||+
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~-----~~~~~~~v~~~i   88 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVT-----EAGRDWLLLGEV   88 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEE-----CSSCEEEEEECC
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecc-----cccceEEEEEee
Confidence            3455553 57899888788888899865432   23567788888766433  3556777665     345679999999


Q ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 048791          375 KNGSVYDHLFASNGPKLSWPLRQSIALGTARGLAYLH  411 (425)
Q Consensus       375 ~~GsL~~~L~~~~~~~L~~~~r~~Ia~~ia~gL~YLH  411 (425)
                      ++.++.+.       .+.   ...++.++++.|+-||
T Consensus        89 ~G~~~~~~-------~~~---~~~~~~~l~~~la~LH  115 (255)
T d1nd4a_          89 PGQDLLSS-------HLA---PAEKVSIMADAMRRLH  115 (255)
T ss_dssp             SSEETTTS-------CCC---HHHHHHHHHHHHHHHT
T ss_pred             eccccccc-------ccc---HHHHHHHHHHHHHHHc
Confidence            87655321       122   2334566777788888