Your job contains 1 sequence.
>048793
MAVSPQIFPPRKRRPSAGAFISPTLSDLKLVESLLILSQEVSSMKPLQFLLQRSCLSIIR
KVKLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETA
ANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQV
LTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKEEIESLEEEIQNQTDQKSKHFAAALI
GLVRYTKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDR
QSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVV
TNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLA
RHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGN
AAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRL
VERGIVEIVAEAMDVLPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRES
AAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRILRRWAAGLD
ARSSSTTTVTTTAMTNSRIVLPS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048793
(683 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 1825 3.0e-188 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 919 2.6e-94 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 876 1.1e-87 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 697 1.0e-68 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 697 1.0e-68 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 658 1.4e-64 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 600 1.9e-58 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 552 2.3e-56 2
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 575 8.6e-56 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 532 6.9e-55 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 563 1.6e-54 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 554 1.5e-53 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 283 6.4e-40 3
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 245 1.8e-37 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 402 5.1e-37 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 354 1.1e-31 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 334 8.2e-29 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 217 2.0e-27 3
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 224 2.7e-25 3
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 280 5.0e-22 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 276 1.5e-21 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 277 8.5e-21 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 264 6.4e-20 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 252 1.1e-18 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 252 1.3e-18 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 249 2.6e-18 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 243 3.3e-18 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 162 1.2e-17 2
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 235 3.2e-17 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 228 5.0e-17 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 221 3.2e-15 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 218 1.6e-14 2
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 172 6.9e-13 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 197 1.7e-12 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 196 2.4e-12 1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 192 2.4e-12 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 195 2.7e-12 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 194 3.3e-12 1
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 193 5.3e-12 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 193 5.5e-12 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 129 8.0e-12 2
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 185 3.2e-11 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 142 1.4e-10 3
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 173 1.4e-09 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 162 5.5e-09 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 163 1.1e-08 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 162 1.9e-08 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 158 5.1e-08 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 159 7.8e-08 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 154 9.0e-08 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 156 1.7e-07 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 151 2.6e-07 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 154 2.7e-07 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 154 2.8e-07 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 148 5.3e-07 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 148 5.5e-07 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 148 5.5e-07 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 148 5.5e-07 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 146 9.5e-07 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 144 1.1e-06 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 145 1.2e-06 1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 146 1.2e-06 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 145 1.2e-06 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 143 1.9e-06 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 150 5.8e-06 2
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 136 7.0e-06 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 137 1.1e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 139 1.1e-05 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 139 1.2e-05 1
UNIPROTKB|Q6K762 - symbol:PUB73 "U-box domain-containing ... 132 4.2e-05 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 133 5.0e-05 1
UNIPROTKB|E1C8F9 - symbol:E1C8F9 "Uncharacterized protein... 133 0.00024 2
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 128 0.00025 2
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 119 0.00043 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 107 0.00055 1
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 109 0.00076 2
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 1825 (647.5 bits), Expect = 3.0e-188, P = 3.0e-188
Identities = 378/634 (59%), Positives = 475/634 (74%)
Query: 9 PPRKRRPSA-GAFISPTLS-DLKLVESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLS 66
P RKRRP G+F SP LS D KL SL + S E+SSM+PL F+L+R+ LS+IRKVK+L+
Sbjct: 10 PARKRRPLVVGSFESPKLSSDTKLTRSLFLASHEISSMQPLPFILRRNSLSLIRKVKILA 69
Query: 67 LFFEELLA--NQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNF 124
F+ELL +Q+ +S LCFEEM IV+QR+K+LI+DC SK+WLL+QI+ A NF
Sbjct: 70 SVFDELLLPRSQLVVYSQSAHLCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNF 129
Query: 125 HELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTL 184
HEL DLST+LDI+PL + LS D +D++ L+ KQCS + VD++D LR +V T+
Sbjct: 130 HELVTDLSTVLDILPLHDFDLSDDAQDLISLLTKQCSDSVQ--FVDARDVALRRKVTDTI 187
Query: 185 DQIKKEIVPDHSILKQMFESLGLRNSSACKXXXXXXXXXXQNQTDQKSKHFAAALIGLVR 244
IK +I PDHS L ++F LGL +S++ Q+Q D +SK AA+LIGLVR
Sbjct: 188 AGIKHQISPDHSTLIKIFNDLGLSDSASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLVR 247
Query: 245 YTKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSIS 304
Y+KCVL+G S D RR +S SDAN+PADFRCPI+LELMR+PVVVATGQTYDR+SI
Sbjct: 248 YSKCVLYGPSTPAPD--FRRHQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESID 305
Query: 305 LWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKA 364
LWI+SGHNTCPKTGQ L HT+LV N ALKNLI LWCR+Q+IPF+ K
Sbjct: 306 LWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKIPFELYGDGG--GEPAPCKE 363
Query: 365 ALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLG 424
A+E TKM SFLI KL+ + S N V+ELR+L+K+D+ +RACIAEAGAI L R+L
Sbjct: 364 AVEFTKMMVSFLIEKLSVADS----NGVVFELRALAKSDTVARACIAEAGAIPKLVRYL- 418
Query: 425 PDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAAT 484
A+ P+LQ+NAVTTILNLSILE NKTRIMET+GALNGVIEVLRSGATWEAK NAAAT
Sbjct: 419 ---ATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAKANAAAT 475
Query: 485 IFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERG 544
+FSL+GV A+R+ LGRK RVV GL+DL K GPTSSKRDALVAILNL +RE VGR VE G
Sbjct: 476 LFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENVGRFVEAG 535
Query: 545 IVEIVAEAMDVLPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAAT 604
++ +A LPEE+V ++EAVV+RGGL A+ AA++ I+ L ++REG+DT+RESAAAT
Sbjct: 536 VMGAAGDAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAAT 595
Query: 605 LVTICRKGGSEMVADIAAVPGIERVIWELMESGT 638
LVT+CRKGGSE+VA++AA+PGIERVIWE++ +GT
Sbjct: 596 LVTMCRKGGSELVAEMAAIPGIERVIWEMIGAGT 629
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 919 (328.6 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 233/653 (35%), Positives = 364/653 (55%)
Query: 10 PRKRR-PSAGAFISPT-LSDLKLVESLLILSQE-VSSMKPLQFLLQRSCLSIIRKVKLLS 66
PR+RR P AGAF +PT L+ L+ ++ L+ V+ +P +R+ ++ R++ LLS
Sbjct: 20 PRRRRLPLAGAFFAPTGLAGATLLRAVASLAASLVAGARPPS--QRRNVDALARRLALLS 77
Query: 67 LFFEELLANQVSF--FSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNF 124
E +L + + FS LCF E+Y+VL R + L+ + + W L++ A +F
Sbjct: 78 AILESILLDTAAAGAFSDAANLCFRELYVVLFRAELLVSYVASAGRAWALLRSPHLAASF 137
Query: 125 HELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTL 184
+L +L+ +LD++P LRLS D ++ L++ C R D + LR +++ L
Sbjct: 138 RDLDAELAVVLDVLPAASLRLSHDATGLLDLLRAHCRCRAPAQYHDPDEAALRERLMDAL 197
Query: 185 DQIKKEIVPDHSILKQMFESLGLRNSSACKXXXXXXXXXXQNQTDQKSKHFAAALIGLVR 244
Q PDH L+ + +G+ +++C+ +Q + +++ L+R
Sbjct: 198 RQFDLGQPPDHPSLQSLLADMGISTAASCRAEIDYLEEQILSQEEDTDLPLVGSVLALLR 257
Query: 245 YTKCVLFGASVQKS--DSRL--RRKKSAS-----DAN--VPADFRCPISLELMRNPVVVA 293
Y +F S K+ D L R++ S D + VP +F CPISL+LMR+PVV +
Sbjct: 258 YCLFAVFDPSNAKALRDWPLSGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVAS 317
Query: 294 TGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASS 353
TGQTYDR SI WIE GH+TCP +GQTLA LV N AL++LI+ WC + +D S+
Sbjct: 318 TGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCGVYGLQYDSPESN 377
Query: 354 EKVNGVV----TNKAALEATKMTASFLINKLAT-SQSMEAANDAVYELRSLSKTDSDSRA 408
E + V +++AA+EA K TA L+ L S++++A A E+R L+KT +RA
Sbjct: 378 EGMAECVAASCSSRAAMEANKATARILVRMLEDGSENVKAV--AAKEIRLLAKTGKQNRA 435
Query: 409 CIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEV 468
IA+ GAI LL R L S Q NAVT +LNLSI E NK RIME EG L ++ V
Sbjct: 436 FIADLGAIPLLCRLL----LSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGV 491
Query: 469 LRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAIL 528
L++G T EAK NAAAT+FSLS VH +K + + V+ L ++ G + K+DA++A+
Sbjct: 492 LQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALF 551
Query: 529 NLAGDRETVGRLVERGIVEIVAEAM--DVLPEESVTILEAVVKRGGLTAIVAAYNT-IKK 585
NL+ E+ R++E V + +++ D + EE+ L ++K+ + +V + T I
Sbjct: 552 NLSTHPESSARMLESCAVVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITS 611
Query: 586 LCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGT 638
L L+R G+ +E+A + L ICR+GGS +V +A +PG+ VI + +GT
Sbjct: 612 LVGLMRRGTPKGKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNGT 664
Score = 39 (18.8 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 37 LSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFF 69
++ S+ P++FLL+R R++ L FF
Sbjct: 1 MAAAASASSPVEFLLRRPAPRR-RRLPLAGAFF 32
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 209/575 (36%), Positives = 322/575 (56%)
Query: 85 VLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELR 144
+LC +E+Y++L R K L++ C SK+WLL+Q + + FH+L ++STLLD++P+ +L
Sbjct: 104 LLCLKELYLLLYRSKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLG 163
Query: 145 LSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMF-E 203
LS D+ + + L+++Q S++ + +D D+ LR + LD + +P L+ F E
Sbjct: 164 LSDDIREQIELLQRQ-SRKAR-LYIDKNDESLRESFYSFLDGFENGKIPSSVDLRMFFVE 221
Query: 204 SLGLRNSSACKXXXXXXXXXXQNQTD--QKSKHFAAALIGLVRYTKCVLFGAS------- 254
LG+R+S +C+ N + + + + RY + +LFG
Sbjct: 222 KLGIRDSKSCRSEIEFLEEQIVNHDGDLEPTGSVINGFVAITRYCRFLLFGFEEDGMEWW 281
Query: 255 VQKSDSRLRRKKSASDAN-----VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIES 309
++ + + R+ A + VP DF CPISL+LM +PV+++TGQTYDR SI+ WIE
Sbjct: 282 IENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEE 341
Query: 310 GHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFD--YAAS-SEKVNGVVTNKAAL 366
GH TCPKTGQ L + +V N ALKNLI WC I ++ + S +E + KAA+
Sbjct: 342 GHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAV 401
Query: 367 EATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPD 426
EA K T S LI LA S A A E+R L+KT ++RA IAEAGAI L R L +
Sbjct: 402 EANKATVSILIKYLADG-SQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSE 460
Query: 427 TASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIF 486
A Q N+VT +LNLSI E NK+RIME L ++ VL SG T EA+ NAAAT+F
Sbjct: 461 NAIA----QENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLF 516
Query: 487 SLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIV 546
SLS VH ++K + + V+ L L++ G K+DA+ A+ NL+ + R++E G V
Sbjct: 517 SLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGV 576
Query: 547 EIVAEAM--DVLPEESVTILEAVVKRG-GLTAIVAAYNTIKKLCILLREGSDTSRESAAA 603
+ A+ + + EE+ L +V++ G AI + + L ++R G+ +E+A A
Sbjct: 577 SSLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVA 636
Query: 604 TLVTICRKGGSEMVADIAAVPGIERVIWELMESGT 638
L+ +CR GG+ + + P I ++ L+ +GT
Sbjct: 637 ALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGT 671
Score = 313 (115.2 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 82/263 (31%), Positives = 142/263 (53%)
Query: 11 RKRRPSAGAFISPT-LSDLKLVESLLILSQEV-SSMKPLQFLLQR-SCLSIIRKVKLLSL 67
R+R PS AF++P LS + LV++L +S EV S ++F QR + S+IRK+++ +
Sbjct: 12 RRRSPSLEAFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNARSLIRKIEIFVV 71
Query: 68 FFEELL-AN-------------QVSFFSPPT-VLCFEEMYIVLQRMKTLIEDCYNGSKMW 112
FE L+ +N S S T +LC +E+Y++L R K L++ C SK+W
Sbjct: 72 LFEFLVDSNWGSTTTRTRARRRSKSSVSESTALLCLKELYLLLYRSKILVDYCAQSSKLW 131
Query: 113 LLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSK 172
LL+Q + + FH+L ++STLLD++P+ +L LS D+ + + L+++Q S++ + +D
Sbjct: 132 LLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELLQRQ-SRKAR-LYIDKN 189
Query: 173 DDKLRLQVLTTLDQIKKEIVPDHSILKQMF-ESLGLRNSSACKXXXXXXXXXXQNQTD-- 229
D+ LR + LD + +P L+ F E LG+R+S +C+ N
Sbjct: 190 DESLRESFYSFLDGFENGKIPSSVDLRMFFVEKLGIRDSKSCRSEIEFLEEQIVNHDGDL 249
Query: 230 QKSKHFAAALIGLVRYTKCVLFG 252
+ + + + RY + +LFG
Sbjct: 250 EPTGSVINGFVAITRYCRFLLFG 272
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 201/637 (31%), Positives = 333/637 (52%)
Query: 24 TLSDLKLVESLLILSQEVSSMKPLQFLL-QRSCLSIIRKVKLLSLFFEELLANQVSFFSP 82
++S LV+SLL L+ E+ S KP F +RS +R V+ L +FFEEL Q+ S
Sbjct: 23 SISLTTLVDSLLQLAGEILSFKPKHFSTNKRSVKETLRHVQTLVIFFEELRI-QIRVGSI 81
Query: 83 PT----VLCFEEMYIVLQRMKTLIEDCY-NGSKMWLLMQIETAANNFHELTIDLSTLLDI 137
P +L E++++ Q++K L++DC +G+K+++LM + +F +LT +ST LD
Sbjct: 82 PAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLDT 141
Query: 138 MPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQ-VLTTLDQIKKEIVPDHS 196
P++ + L +V +++ L+ +Q K A D +DDK + V + + I P+
Sbjct: 142 FPVRSVDLPGEVNELIYLVMRQTRKSE--ARPD-RDDKRAIDSVYWFFNLFENRINPNSD 198
Query: 197 ILKQMFESLGLRNSSAC-KXXXXXXXXXXQNQTDQKSKHFAAALIGLVRYTKCVLF-GAS 254
+ ++ + +G+R C K + + L+G + Y +CV+ G
Sbjct: 199 EILRVLDHIGVRKWRDCVKEIDFLREEISVGKKSNIEIELLSNLMGFICYCRCVILRGID 258
Query: 255 V--QKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN 312
V ++ D NV D RCPISLE+M +PVV+ +G TYDR SI+ W SG+
Sbjct: 259 VDDEEKDKEEDDLMMVRSLNVD-DLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNI 317
Query: 313 TCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMT 372
TCPKTG+TL T LV N ++K +I + ++ + +KV+ V + AA EA K+T
Sbjct: 318 TCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGK-KKVD-VAESLAAEEAGKLT 375
Query: 373 ASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLP 432
A FL +L E A+ E+R L+KT + R+C+ EAG + L + L D P
Sbjct: 376 AEFLAGELIKGDEEEMVK-ALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDD----P 430
Query: 433 NLQVNAVTTILNLSILEANKTRIM-ETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGV 491
+Q NA+ I+NLS A KTRI+ E G L ++EVL GA E++ AAA +F LS +
Sbjct: 431 RIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSL 490
Query: 492 HAHRKTLGRKTRVVKGLMDLVKGGP--TSSKRDALVAILNLAGDR-ETVGRLVERGIVEI 548
+ + +G + + GL+ +VK S+KR+AL+AI +L ++ + R++ GIV +
Sbjct: 491 GDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPV 550
Query: 549 VA------EAMDVLPEESVTILEAVVKR-GGLTAIVAAYNTIKKLCIL-LREGSDTSRES 600
+ E D + +S+ IL + + G+ +++ + IL E S +++
Sbjct: 551 LLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQH 610
Query: 601 AAATLVTICRKGGSEMVADIAAVPGIERVIWELMESG 637
A L+ +C GGS++V +A P I ++ +G
Sbjct: 611 CVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNG 647
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 200/619 (32%), Positives = 316/619 (51%)
Query: 29 KLVESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCF 88
+L+ L+ +E+S + + + ++R++ LLS FFEEL+ V + F
Sbjct: 11 ELMSRLVDSVKEISGFSSSRGFIGKIQGDLVRRITLLSPFFEELIDVNVEL-KKDQITGF 69
Query: 89 EEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQD 148
E M I L L GSK++ L ++ F ++T+++ L +P +++ +S++
Sbjct: 70 EAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEE 129
Query: 149 VEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLR 208
V + V L+ Q KR K +S LQ+ L + + PD ILK++ + L L
Sbjct: 130 VREQVQLLHFQF-KRAKERWEESD-----LQLSHDLAMAENVMDPDPIILKRLSQELQLT 183
Query: 209 NSSACKXXXXXXXX---XXQNQTDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRK 265
K D + ++ L LV + + R
Sbjct: 184 TIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFVTMESSDPDPSTGSRIVSRH 243
Query: 266 KSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTN 325
+S +P FRCPISLELM++PV+V+TGQTY+R SI W+++GH TCPK+ +TL H
Sbjct: 244 RSPV---IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG 300
Query: 326 LVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQS 385
L N LK+LIALWC I S + + + ++ + + L+ KLA +
Sbjct: 301 LTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSS-DCDRTFVLSLLEKLANGTT 359
Query: 386 MEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLG-PDTASRLPNLQVNAVTTILN 444
E A ELR L+K + D+R CIAEAGAI LL L PD P Q ++VT +LN
Sbjct: 360 -EQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPD-----PRTQEHSVTALLN 413
Query: 445 LSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRV 504
LSI E NK I++ GA+ ++EVL++G+ EA+ NAAAT+FSLS + ++ +G
Sbjct: 414 LSINEGNKGAIVDA-GAITDIVEVLKNGSM-EARENAAATLFSLSVIDENKVAIGA-AGA 470
Query: 505 VKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVE----IVAEAMDVLPEES 560
++ L+ L++ G K+DA AI NL + R V+ GIV+ ++ +A + +E+
Sbjct: 471 IQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEA 530
Query: 561 VTILEAV-VKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVAD 619
+ IL + + G TAI A +I L ++R GS +RE+AAA L +C G E + +
Sbjct: 531 LAILAILSTNQEGKTAIAEA-ESIPVLVEIIRTGSPRNRENAAAILWYLCI-GNIERL-N 587
Query: 620 IAAVPGIERVIWELMESGT 638
+A G + + EL E+GT
Sbjct: 588 VAREVGADVALKELTENGT 606
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 192/621 (30%), Positives = 321/621 (51%)
Query: 32 ESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEM 91
+SL+ + E++++ + +++ C ++ R++KLL FEE+ + S T+ +
Sbjct: 10 QSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPI-SEDTLKTLMNL 68
Query: 92 YIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVED 151
+ K ++ C GSK++L+M+ E + E+++ L L +P +EL +S +V +
Sbjct: 69 KEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVRE 128
Query: 152 VVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRN-S 210
V L+ Q +R KG VD DD+L + L +L ++ +L+++ + L L
Sbjct: 129 QVELVLSQF-RRAKGR-VDVSDDEL-YEDLQSLCNKSSDVDAYQPVLERVAKKLHLMEIP 185
Query: 211 SACKXXXXXXXXXXQNQTD--QKSKHFAAALIGLVRYTKCVLFGASVQKS--DSRLRRKK 266
+ + D + + A L + + + QK +SR +
Sbjct: 186 DLAQESVALHEMVASSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQT 245
Query: 267 SASDAN----VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLA 322
S + + +P DFRCPISLE+MR+PV+V++GQTY+R I WIE GH+TCPKT Q L
Sbjct: 246 STAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALT 305
Query: 323 HTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLAT 382
T L N L++LIA WC I SS + V + + EA K+ L+ +LA
Sbjct: 306 STTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIED--LMWRLAY 363
Query: 383 SQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLG-PDTASRLPNLQVNAVTT 441
E A E+R L+K ++D+R IAEAGAI LL L PD SR+ Q ++VT
Sbjct: 364 GNP-EDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPD--SRI---QEHSVTA 417
Query: 442 ILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRK 501
+LNLSI E NK I+ GA+ G+++VL+ G+ EA+ NAAAT+FSLS + ++ T+G
Sbjct: 418 LLNLSICENNKGAIVSA-GAIPGIVQVLKKGSM-EARENAAATLFSLSVIDENKVTIGA- 474
Query: 502 TRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIV----EIVAEAMDVLP 557
+ L+ L+ G K+DA A+ NL + G+ + G++ ++ E +
Sbjct: 475 LGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMV 534
Query: 558 EESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMV 617
+E++ IL + AI+ + + + L +R GS +RE+AAA LV +C G + +
Sbjct: 535 DEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLC-SGDPQHL 593
Query: 618 ADIAAVPGIERVIWELMESGT 638
+ + G+ + +L +GT
Sbjct: 594 VEAQKL-GLMGPLIDLAGNGT 613
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 186/611 (30%), Positives = 305/611 (49%)
Query: 37 LSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQ 96
++ E++++ + L+R C + R+V+LL+ + L A+ S S P + L
Sbjct: 5 VADEIAALPEPRGPLRRPCADLSRRVRLLAPLLDHLPASSSSSSSTP-------LADALG 57
Query: 97 RMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLI 156
+ L+ +GSK+ M+ + + F + + LD +P + Q+V++ V L+
Sbjct: 58 AARDLLRKTRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALV 117
Query: 157 KKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKXX 216
Q + + D D +L + + L D ++L ++ L L + K
Sbjct: 118 HSQFQRAS--TRTDPPDTQLSMDLAWALTDNPS----DPALLTRISHKLQLHTMADMKNE 171
Query: 217 XXXXXXXXQNQTDQKSKHFAAALIGLVRYTK-CVLFGASVQKSDSRLRRKKSASDAN--V 273
+ T + + L++ K CV+ +D+ R S + +
Sbjct: 172 SIALHNMVIS-TAGEPDGCVDQMSSLLKKLKDCVV--TEDHANDALTTRSASIKHRSPII 228
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P +FRCPISLELM++PV+V++GQTY+R I W++SGH TCPKT Q L+HT+L N LK
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLK 288
Query: 334 NLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASF--LINKLATSQSMEAAND 391
+LI+ WC I K N KAA + A L+N+L S + +
Sbjct: 289 SLISQWCEANGIELP----KNKQNSR-DKKAAKSSDYDHAGLVSLMNRLR-SGNQDEQRA 342
Query: 392 AVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEAN 451
A E+R L+K + ++R CIAEAGAI LL L +S P Q +AVT +LNLSI E N
Sbjct: 343 AAGEIRLLAKRNVNNRICIAEAGAIPLLVNLL----SSSDPRTQEHAVTALLNLSIHENN 398
Query: 452 KTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDL 511
K I+++ A+ ++EVL++G+ E + NAAAT+FSLS V ++ T+G + L++L
Sbjct: 399 KASIVDSH-AIPKIVEVLKTGSM-ETRENAAATLFSLSVVDENKVTIGA-AGAIPPLINL 455
Query: 512 VKGGPTSSKRDALVAILNLAGDRETVGRLVERGIV----EIVAEAMDVLPEESVTILEAV 567
+ G K+DA AI NL + R V+ GIV + + + +E++++L +
Sbjct: 456 LCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSIL 515
Query: 568 VKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIE 627
++A I L +++ GS +RE+AAA L +C + +A AA G+E
Sbjct: 516 AGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAA--GVE 573
Query: 628 RVIWELMESGT 638
+ EL E+GT
Sbjct: 574 DALKELSETGT 584
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 552 (199.4 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 144/382 (37%), Positives = 219/382 (57%)
Query: 266 KSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTN 325
K + +P DF CP+SLELM++PV+VATGQTY+R I WI+ G+ TCPKT Q L +
Sbjct: 234 KKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFT 293
Query: 326 LVTNTALKNLIALWCREQRI--PFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATS 383
L N L++LI+ WC E I P Y +NG N + + L+ +L+ S
Sbjct: 294 LTPNYVLRSLISRWCAEHNIEQPAGY------INGRTKNSGDMSVIRA----LVQRLS-S 342
Query: 384 QSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHL-GPDTASRLPNLQVNAVTTI 442
+S E +AV E+RSLSK +D+R IAEAGAI +L L D A+ Q NA+T +
Sbjct: 343 RSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVAT-----QENAITCV 397
Query: 443 LNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKT 502
LNLSI E NK IM GA+ +++VLR+G T EA+ NAAAT+FSLS ++ +G +
Sbjct: 398 LNLSIYENNKELIMFA-GAVTSIVQVLRAG-TMEARENAAATLFSLSLADENKIIIGG-S 454
Query: 503 RVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDV-----LP 557
+ L+DL++ G K+DA A+ NL GR V GIV + + + +
Sbjct: 455 GAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMV 514
Query: 558 EESVTILEAVVK-RGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEM 616
+E++TIL + + +AIV A NT+ L +L+ +RE+AAA L+++C++ ++
Sbjct: 515 DEALTILSVLANNQDAKSAIVKA-NTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKL 573
Query: 617 VADIAAVPGIERVIWELMESGT 638
+ I + + ++ +L ++GT
Sbjct: 574 IT-IGRLGAVVPLM-DLSKNGT 593
Score = 46 (21.3 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 17 AGAFISPTLSDLKLVESLLILSQEVSSMKPLQF-LLQRSCLSIIRKVKLLSLFFEEL 72
AG +SP SLL L ++ + PL + ++ C + R+V LL+ EE+
Sbjct: 2 AGGIVSPA--------SLLDLIADIVEI-PLNTGMFKKDCADLTRRVCLLTHLLEEI 49
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 170/616 (27%), Positives = 311/616 (50%)
Query: 30 LVESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFE 89
LV ++ + + + + + Q+ C +++R++K+L F +E+ F SP
Sbjct: 53 LVSDIVSIVEFLDQINGYRRTQQKECFNLVRRLKILIPFLDEIRG----FESPSCKHFLN 108
Query: 90 EMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDV 149
+ V K L+E C NGSK+++ + ET FH + L+ +L P EL +S D
Sbjct: 109 RLRKVFLAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDA 168
Query: 150 EDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRN 209
+D + + KQ K + D++D +L + ++ + D +I++++ + L L+
Sbjct: 169 KDEIDSLCKQLKKAKRRT--DTQDIELAVDMMVVFSKTDPRNA-DSAIIERLAKKLELQT 225
Query: 210 SSACKXXXXXXXXXXQNQ--TDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKS 267
K Q++ + ++K L+ ++ K A+ + + +
Sbjct: 226 IDDLKTETIAIQSLIQDKGGLNIETKQHIIELLN--KFKKLQGLEATDILYQPVINKAIT 283
Query: 268 ASDANV-PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNL 326
S + + P +F CPI+LE+M +PV++ATGQTY+++SI W ++GH TCPKT Q L H +L
Sbjct: 284 KSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSL 343
Query: 327 VTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSM 386
N ALKNLI WC + ++ ++V+ N+ K S L+ L++SQ +
Sbjct: 344 APNFALKNLIMQWCEKN----NFKIPEKEVSPDSQNEQ-----KDEVSLLVEALSSSQ-L 393
Query: 387 EAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLG-PDTASRLPNLQVNAVTTILNL 445
E +V ++R L++ + ++R IA AGAI LL + L PD+ +Q NAVTT+LNL
Sbjct: 394 EEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSG-----IQENAVTTLLNL 448
Query: 446 SILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVV 505
SI E NK +++ EGA+ +IE+L +G EA+ N+AA +FSLS + ++ T+G +
Sbjct: 449 SIDEVNK-KLISNEGAIPNIIEILENGNR-EARENSAAALFSLSMLDENKVTIGLSNGIP 506
Query: 506 KGLMDLVKGGPTSSKR--DALVAI-LNLAGDRETVGRLVERGIVEIVAEAMDVLPEESVT 562
+ L G K AL + LN A + + + ++ ++ + + +E+++
Sbjct: 507 PLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALS 566
Query: 563 ILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAA 622
IL + + + I+ L +R+G+ ++E A + L+ + S ++A +
Sbjct: 567 ILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQF 626
Query: 623 VPGIERVIWELMESGT 638
G+ + E+ SGT
Sbjct: 627 --GVYEYLVEITTSGT 640
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 532 (192.3 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 142/381 (37%), Positives = 218/381 (57%)
Query: 266 KSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTN 325
+ + + +P DF CPISLELM++P +V+TGQTY+R I WI+ G+ +CPKT Q L +
Sbjct: 236 QKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFT 295
Query: 326 LVTNTALKNLIALWCREQRI--PFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATS 383
L N L++LI+ WC + I P Y K + + + + + A L+ KL+ S
Sbjct: 296 LTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRA--LVCKLS-S 352
Query: 384 QSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTIL 443
QS+E AV E+RSLSK +D+R IAEAGAI +L + L D + Q NAVT IL
Sbjct: 353 QSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTET---QENAVTCIL 409
Query: 444 NLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTR 503
NLSI E NK IM GA+ ++ VLR+G+ EA+ NAAAT+FSLS ++ +G
Sbjct: 410 NLSIYEHNKELIM-LAGAVTSIVLVLRAGSM-EARENAAATLFSLSLADENKIIIGASGA 467
Query: 504 VVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAM-----DVLPE 558
++ L+DL++ G K+DA A+ NL + GR V GIV+ + + + + + +
Sbjct: 468 IM-ALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMAD 526
Query: 559 ESVTILEAVVKRG-GLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMV 617
E++TIL + TAI+ A N I L L++ +RE+AAA L+ +C++ +++
Sbjct: 527 EALTILSVLASNQVAKTAILRA-NAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLI 585
Query: 618 ADIAAVPGIERVIWELMESGT 638
+ I + + ++ EL GT
Sbjct: 586 S-IGRLGAVVPLM-ELSRDGT 604
Score = 52 (23.4 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 32 ESLLILSQEVSSMKPLQF-LLQRSCLSIIRKVKLLSLFFEEL 72
+SL+ L E++ + P F L ++ C + R+V LL+ EE+
Sbjct: 9 DSLIGLIAEINEI-PGNFGLFKKDCSDLARRVGLLTHLIEEI 49
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 169/628 (26%), Positives = 310/628 (49%)
Query: 22 SPTLSDLKLVESLLILSQEVSSMKPLQFLLQR-SCLSIIRKVKLLSLFFEEL---LANQV 77
S ++S + L++SL+ L+ ++ + K F + S +R+++ L + FEE+ + N
Sbjct: 21 SESISIVTLLDSLIQLAGDILTFKSKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSR 80
Query: 78 SFFSPPTVLC-FEEMYIVLQRMKTLIEDCY-NGSKMWLLMQIETAANNFHELTIDLSTLL 135
+F +E+++ Q++K L+EDC +G+++ ++M + +++ LT +ST L
Sbjct: 81 RYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSL 140
Query: 136 DIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDH 195
P+ + L+ +V +++ L+ +Q K G ++ D + + L +VPD
Sbjct: 141 SAFPVASVDLTTEVNELIDLVVRQARKY--GVQPETNDKRAVSSINRILALFVNRVVPDP 198
Query: 196 SILKQMFESLGLRNSSAC-KXXXXXXXXXXQNQTDQKSK------HFAAALIGLVRYTKC 248
+ ++ + +G+R C K + D+K K ++L+G + Y +C
Sbjct: 199 DEINRILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRC 258
Query: 249 VLFGASVQKSDSRLRRKKSAS-DANV-----PADFRCPISLELMRNPVVVATGQTYDRQS 302
++ G +++ D + D ++ D CPISLE+M +PVV+ TG TYDR S
Sbjct: 259 IILGR-IERDDHHNHHEDGIKKDHDLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRSS 317
Query: 303 ISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTN 362
I+ W SG+ TCP TG+ L T LV N +++ +I C+ I + K + V
Sbjct: 318 ITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVP 377
Query: 363 K--AALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLA 420
+ AA A K+ A FL ++L E AV E+R +KT S +R+C+ +AGA+ L
Sbjct: 378 ESLAAKGAGKLIAKFLTSELINGGE-EMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLL 436
Query: 421 RHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGN 480
+ L +S +Q NA+ ILNLS K++I EG L ++E+L GA E +
Sbjct: 437 KLL----SSVDIRIQENAMAGILNLSKHVTGKSKIAG-EG-LKILVEILNEGAKTETRLY 490
Query: 481 AAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGP--TSSKRDALVAILNLAGDRETVG 538
+A+ +F LS V + + +G + GLM++VKG S+KR AL+A++ L +
Sbjct: 491 SASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHW 550
Query: 539 RLVERGIVEIVAEAM---DV---LPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLRE 592
R++ G V I+ + + ++ L + + L + + T V +K +L
Sbjct: 551 RVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSS 610
Query: 593 GSDTS---RESAAATLVTICRKGGSEMV 617
D+ ++ ++ +C GG ++V
Sbjct: 611 SEDSPVAVKQHCVGLILNLCLNGGRDVV 638
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 178/598 (29%), Positives = 292/598 (48%)
Query: 52 QRSCLSIIRKVKLLSLFFEELLANQVSFFS-PPTVLCFEEMYIVLQRMKTLIEDCYNGSK 110
+R L++ R+++LL F EEL + + L+ L+ GS+
Sbjct: 50 RRQLLALSRRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALLRLGREGSR 109
Query: 111 MWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVD 170
+ L+++ ++ F + + L L +P EL +S +V + V L+ Q KR K +D
Sbjct: 110 ISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQL-KRAKER-ID 167
Query: 171 SKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKXXXXXXXXXXQNQTDQ 230
DD+ +L+ D+ + + +IL ++ E L L + + Q
Sbjct: 168 MPDDEFYNDLLSVYDK-NYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQ 226
Query: 231 KSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRK-KSASDAN---VPADFRCPISLELM 286
+ L++ K + + R S D+ +P +FRCPISLELM
Sbjct: 227 DPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELM 286
Query: 287 RNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIP 346
++PV+V+TGQTY+R I WI SGH+TCP T Q ++ + L N L++LI+ WC +
Sbjct: 287 KDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGM- 345
Query: 347 FDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDS 406
+ S + N ++ E + A L++KL S E A ELR L+K ++++
Sbjct: 346 -EPPKRSTQPNKPTPACSSSERANIDA--LLSKLC-SPDTEEQRSAAAELRLLAKRNANN 401
Query: 407 RACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVI 466
R CIAEAGAI LL L ++S L Q +AVT +LNLSI E NK I+ + GA+ ++
Sbjct: 402 RICIAEAGAIPLLLSLL---SSSDL-RTQEHAVTALLNLSIHEDNKASIISS-GAVPSIV 456
Query: 467 EVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVA 526
VL++G+ EA+ NAAAT+FSLS + ++ T+G + L+ L+ G K+DA A
Sbjct: 457 HVLKNGSM-EARENAAATLFSLSVIDEYKVTIGGMG-AIPALVVLLGEGSQRGKKDAAAA 514
Query: 527 ILNLAGDRETVGRLVERGIVEI----VAEAMDVLPEESVTILEAVVKRGGLTAIVAAYNT 582
+ NL + GR + G+V + V L +E++ IL + A + A
Sbjct: 515 LFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEP 574
Query: 583 IKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVP--GIERVIWELMESGT 638
+ L ++ G+ +RE+AAA ++ +C G + +A GI + EL +GT
Sbjct: 575 VPVLVEMIGSGTPRNRENAAAVMLHLC--SGEHHLVHLARAQECGIMVPLRELALNGT 630
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 283 (104.7 bits), Expect = 6.4e-40, Sum P(3) = 6.4e-40
Identities = 93/271 (34%), Positives = 145/271 (53%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHL-GPDTASRLPNL 434
L+ +L +S S++ A ELR L+K + D+R I +GAI LL L D+A+
Sbjct: 549 LVEELKSS-SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSAT----- 602
Query: 435 QVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAH 494
Q NAVT +LNLSI + NK I + GA+ +I VL +G++ EAK N+AAT+FSLS + +
Sbjct: 603 QENAVTALLNLSINDNNKKAIADA-GAIEPLIHVLENGSS-EAKENSAATLFSLSVIEEN 660
Query: 495 RKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD 554
+ +G+ + + L+DL+ G K+DA A+ NL+ +E +V+ G V + + MD
Sbjct: 661 KIKIGQ-SGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMD 719
Query: 555 V---LPEESVTILE--AVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTIC 609
+ +++V +L A + G AI I L ++ GS +E+AAA L+ +
Sbjct: 720 PAAGMVDKAVAVLANLATIPEGR-NAI-GQEGGIPLLVEVVELGSARGKENAAAALLQLS 777
Query: 610 RKGGS--EMVADIAAVPGIERVIWELMESGT 638
G MV AVP + L +SGT
Sbjct: 778 TNSGRFCNMVLQEGAVPPLVA----LSQSGT 804
Score = 217 (81.4 bits), Expect = 6.4e-40, Sum P(3) = 6.4e-40
Identities = 54/173 (31%), Positives = 87/173 (50%)
Query: 185 DQIKKEIVPDHSILKQMFESLGLRNSSACKXXXXXXXXXXQNQTDQKSKHFAAALIGLVR 244
DQ + + P IL ++ E+ GLR++ + Q + ++S++ A V
Sbjct: 153 DQ-RDGVGPSPEILVKIGENTGLRSNQ--EILIEAVALERQKEMAEQSENNAE-----VE 204
Query: 245 YTKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSIS 304
+ ++ + L ++ S + ADF CP+SLE+M +PV+V++GQTY++ I
Sbjct: 205 FLDQLIVIVNRMHERLLLIKQTQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIK 264
Query: 305 LWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVN 357
WI+ G CPKT QTL HT L+ N +K LIA WC + S +N
Sbjct: 265 RWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIANWCETNDVKLPDPNKSTSLN 317
Score = 185 (70.2 bits), Expect = 3.9e-29, Sum P(3) = 3.9e-29
Identities = 67/239 (28%), Positives = 120/239 (50%)
Query: 373 ASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLP 432
A L+ +L S +AV L +LS D++ +A IA+AGAI L H+ + +S
Sbjct: 587 AIVLLVELLYSTDSATQENAVTALLNLSINDNNKKA-IADAGAIEPLI-HVLENGSSEAK 644
Query: 433 NLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVH 492
N+ T+ +LS++E NK +I ++ GA+ ++++L +G T K +AA +F+LS +H
Sbjct: 645 E---NSAATLFSLSVIEENKIKIGQS-GAIGPLVDLLGNG-TPRGKKDAATALFNLS-IH 698
Query: 493 AHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAIL-NLAGDRETVGRLVERGIVEIVAE 551
K + ++ V+ L+DL+ P + D VA+L NLA E + + G + ++ E
Sbjct: 699 QENKAMIVQSGAVRYLIDLMD--PAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVE 756
Query: 552 AMDV-----LPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATL 605
+++ + +L+ G +V + L L + G+ +RE A A L
Sbjct: 757 VVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815
Score = 52 (23.4 bits), Expect = 6.4e-40, Sum P(3) = 6.4e-40
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 109 SKMWLLMQIETAANNFHELTIDLSTLL----DIMP--LQELRLSQDVEDVVVLIKKQCSK 162
SK++ ++QIE+ + +D L + +P L L Q +E + L ++ S
Sbjct: 86 SKVYFVLQIESLLPKMRDTIVDTFQFLMSSKNHLPDELSPASLEQCLEKIKHLSYEEISS 145
Query: 163 RTKGALVDSKD 173
GAL D +D
Sbjct: 146 VIDGALRDQRD 156
Score = 50 (22.7 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 93 IVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHE 126
+ L+R K + E N +++ L Q+ N HE
Sbjct: 185 VALERQKEMAEQSENNAEVEFLDQLIVIVNRMHE 218
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 245 (91.3 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 80/298 (26%), Positives = 146/298 (48%)
Query: 53 RSCL-SIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNG-SK 110
++C+ +++ +KLL +E++ ++ C E++ V+ + + +ED SK
Sbjct: 31 QTCIGNMVLLLKLLKPLLDEVVDCKIPSDDCLYKGC-EDLDSVVNQAREFLEDWSPKLSK 89
Query: 111 MWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVD 170
++ + Q E ++++S +L + Q ++ V+ V +++ S + +G L++
Sbjct: 90 LFGVFQCEVLLGKVQTCSLEISRIL-LQLSQSSPVTSSVQSVERCVQETESFKQEGTLME 148
Query: 171 SKDDKLRLQV--LTTLDQIKKEIVPDHSILKQMFESLGL-RNSSACKXXXXXXXXXXQNQ 227
++ LR Q +T+LD +H L+ + + LGL N K ++Q
Sbjct: 149 LMENALRNQKDDITSLDN-------NH--LESIIQMLGLISNQDLLKESITVEKERIRSQ 199
Query: 228 TDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISLELMR 287
KS+ L+ C+ + K++ L K S +P FRCP+S ELM
Sbjct: 200 AS-KSEEDMEQTEQLIELVLCIR--EHMLKTEF-LEVAKGIS---IPPYFRCPLSTELML 252
Query: 288 NPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRI 345
+PV+VA+GQT+DR SI W+++G CP+T Q L H L+ N +K +IA W RI
Sbjct: 253 DPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVKAMIASWLEANRI 310
Score = 241 (89.9 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 85/276 (30%), Positives = 138/276 (50%)
Query: 371 MTASFLINKLAT--SQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTA 428
MT S I + S S + A E+R L+ ++R I GAI L L +
Sbjct: 469 MTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSE-- 526
Query: 429 SRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSL 488
+L Q +AVT +LNLSI E NK I+E GA+ ++ VL +G AK N+AA++FSL
Sbjct: 527 EKLT--QEHAVTALLNLSISELNKAMIVEV-GAIEPLVHVLNTGND-RAKENSAASLFSL 582
Query: 489 SGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEI 548
S + +R+ +G+ ++ L++L+ G K+DA A+ NL+ + R+V+ V+
Sbjct: 583 SVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKY 642
Query: 549 VAEAMDV---LPEESVTILEAVVKRG-GLTAIVAAYNTIKKLCILLREGSDTSRESAAAT 604
+ E +D + +++V +L + G G AIV I L + GS +E+AA+
Sbjct: 643 LVELLDPDLEMVDKAVALLANLSAVGEGRQAIVRE-GGIPLLVETVDLGSQRGKENAASV 701
Query: 605 LVTICRKGGS--EMVADIAAVPGIERVIWELMESGT 638
L+ +C +V A+P + L +SGT
Sbjct: 702 LLQLCLNSPKFCTLVLQEGAIPPLVA----LSQSGT 733
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 402 (146.6 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 108/342 (31%), Positives = 181/342 (52%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P +FRCP+S ELMR+PVV+A+GQTYD+ I W+ SG+ TCPKT Q L HT L N ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 334 NLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAV 393
+I+ WC++ + S N V ++ + + + L+ K+++S +++ A
Sbjct: 135 EMISKWCKKNGLE---TKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSS-NLQDQKSAA 190
Query: 394 YELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPN--LQVNAVTTILNLSILE-A 450
ELR L++ ++ RA E+ + R + P P+ LQ + VTT+LN+SI + +
Sbjct: 191 KELRLLTRKGTEFRALFGESPDE--ITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDS 248
Query: 451 NKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMD 510
NK + E + +I+ LR G T + NAAA IF+LS + +++ +G K+ ++K L+D
Sbjct: 249 NKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSALDSNKVLIG-KSGILKPLID 306
Query: 511 LVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD--VLPEESVTILEAVV 568
L++ G + +D AI L E R V G V ++ + + + +E + IL +V
Sbjct: 307 LLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLV 366
Query: 569 KRGGLTAIVAAYNTIKKLCILLREGS-DTSRESAAATLVTIC 609
+ + L + RE ++E+A L TIC
Sbjct: 367 THWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTIC 408
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 354 (129.7 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 105/352 (29%), Positives = 186/352 (52%)
Query: 272 NVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTN-LVTNT 330
++P DFRCPISLE+M +PV++ +G T+DR SI WI+SG+ TCP T L+ T L+ N
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNH 63
Query: 331 ALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAAN 390
AL++LI ++A S K + + E + + LI+ L + S A+
Sbjct: 64 ALRSLI----------LNFAHVSLKESS--RPRTQQEHSHSQSQALISTLVSQSSSNASK 111
Query: 391 -DAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILE 449
+++ L L+K DS R + E+GA+ + D+ +++ LQ +++ +LNLS+ +
Sbjct: 112 LESLTRLVRLTKRDSSIRRKVTESGAVRAALDCV--DSCNQV--LQEKSLSLLLNLSLED 167
Query: 450 ANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLM 509
NK ++ +G + ++ VLR G+ + K AA + SL+ V ++ T+G + L+
Sbjct: 168 DNKVGLV-ADGVIRRIVTVLRVGSP-DCKAIAATLLTSLAVVEVNKATIGSYPDAISALV 225
Query: 510 DLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDVLPEESVTILEAVVK 569
L++ G ++++ A+ L + R+V+ G V I+ EA D E +V +L +VK
Sbjct: 226 SLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSGLERAVEVLGLLVK 285
Query: 570 -RGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADI 620
RGG + ++ L +LR G+ + + L +C G E+V ++
Sbjct: 286 CRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSG-EIVDEV 336
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 334 (122.6 bits), Expect = 8.2e-29, P = 8.2e-29
Identities = 100/316 (31%), Positives = 168/316 (53%)
Query: 238 ALIGLVR-YTKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQ 296
A G+V+ + V ++K +S++ + S VP +F C +S +M PV++A+GQ
Sbjct: 37 AFSGVVKAIDEAVRILTCLRKVESKIP-ESDISPVEVPKEFICTLSNTIMIEPVIIASGQ 95
Query: 297 TYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKV 356
TY+++ I+ W++ TCPKT Q L+H + N + +LI WC + +D+ S+++
Sbjct: 96 TYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLISDLITQWCLVNK--YDHQKPSDEL 152
Query: 357 NGVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAI 416
A L + + A L+ ++++S S+ +A ELR +K + R AG
Sbjct: 153 ------VAELFTSDIEA--LLQRVSSSSSVADQIEAAKELRHQTKKFPNVRVFFV-AGIH 203
Query: 417 ALLARHLGP----DTA--SRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLR 470
+ R L P D A S L LQ N VT + NLSILE+NKT I E + + + L+
Sbjct: 204 DSITRLLSPLSTLDEAVDSSL-ELQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLK 262
Query: 471 SGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNL 530
G T E + NAAAT+ SLS + +++ +G + VK L+DL++ G + ++A + NL
Sbjct: 263 QG-TDETRRNAAATLSSLSAIDSNKIIIGN-SEAVKALIDLIEEGDLLATKEATSTVFNL 320
Query: 531 AGDRETVGRLVERGIV 546
E G++V G++
Sbjct: 321 CIVLENKGKVVSAGLI 336
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 217 (81.4 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 38/81 (46%), Positives = 54/81 (66%)
Query: 265 KKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHT 324
++S+ + P + RCPISL+LM +PV++A+GQTY+R I W GHNTCPKT Q L+H
Sbjct: 271 RRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHL 330
Query: 325 NLVTNTALKNLIALWCREQRI 345
L N +K LI+ WC + +
Sbjct: 331 CLTPNYCVKALISSWCEQNGV 351
Score = 136 (52.9 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 54/260 (20%), Positives = 110/260 (42%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQ 435
L+ L ++ V ++R L K D ++R + E G + L + LG + Q
Sbjct: 426 LLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQ 485
Query: 436 VNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHR 495
+ NL++ +M G + + E+L + + G+ A +LS + +
Sbjct: 486 KVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNP---HSHGSVTAIYLNLSCLEEAK 542
Query: 496 KTLGRKTRVVKGLMDLV-KGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD 554
+G + V +++L+ K DAL ++ +L+ + L+ +V + +++
Sbjct: 543 PVIG-SSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNAL-QSLT 600
Query: 555 VLPEESVT------ILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTI 608
+ E+ T +L V+ G +V+A + + LC +L G +E A + L+ +
Sbjct: 601 ISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLIL 660
Query: 609 CRKGG--SEMVADIAAVPGI 626
C SEMV +P +
Sbjct: 661 CNHSEICSEMVLQEGVIPSL 680
Score = 83 (34.3 bits), Expect = 2.0e-27, Sum P(3) = 2.0e-27
Identities = 49/217 (22%), Positives = 104/217 (47%)
Query: 54 SCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWL 113
+ LS+I K++S+F L A + S LC +++VL+++K ++ C SK++L
Sbjct: 24 NALSVIY-CKIMSIF-PSLEAARPRSKSGIQALC--SLHVVLEKVKNILRHCTESSKLYL 79
Query: 114 LMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKD 173
+ ++ F + S+L D + E + Q + ++ I + + T+ +L D +
Sbjct: 80 AITGDSVVLKFEKAK---SSLTDSLRRVEDIVQQSIGSQLLEILMEL-ENTEFSL-DPAE 134
Query: 174 DKLRLQVLTTLDQIKK-EIVPDHSILKQMFES---LGLRNSSAC---KXXXXXXXXXXQN 226
++ Q++ L Q E D++ L+ ++ LG+ +S A + +
Sbjct: 135 KEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTERRCLKKLIERARM 194
Query: 227 QTDQKSKHFAAALIGLVR-YTKCVLFGASV-QKSDSR 261
+ D++ + A L+ L+R Y+K LF + + +DS+
Sbjct: 195 EDDKRKESIVAYLLHLMRKYSK--LFRSEIWDDNDSQ 229
Score = 70 (29.7 bits), Expect = 1.3e-20, Sum P(3) = 1.3e-20
Identities = 30/127 (23%), Positives = 54/127 (42%)
Query: 352 SSEKVNGVVTNKAALEATK------MTASFLINKLATSQSMEAANDAVYELRSLSKTDSD 405
S V + N + LE K + F++N L T ++ DA++ L LS T
Sbjct: 524 SHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLS-TYPP 582
Query: 406 SRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGV 465
+ C+ A + L + L T S ++ +LNL + EA K ++ ++ +
Sbjct: 583 NIPCLLSADLVNAL-QSL---TISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNL 638
Query: 466 IEVLRSG 472
+L +G
Sbjct: 639 CTILDTG 645
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 224 (83.9 bits), Expect = 2.7e-25, Sum P(3) = 2.7e-25
Identities = 44/99 (44%), Positives = 58/99 (58%)
Query: 251 FGASVQKSDS----RLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLW 306
FG + K S + +KS P + RCPISL+LM +PV++A+GQTY+R I W
Sbjct: 249 FGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKW 308
Query: 307 IESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRI 345
GHN+CPKT Q L H +L N +K LIA WC + I
Sbjct: 309 FSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGI 347
Score = 125 (49.1 bits), Expect = 2.7e-25, Sum P(3) = 2.7e-25
Identities = 53/241 (21%), Positives = 100/241 (41%)
Query: 393 VYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANK 452
V +R L K + ++R + G + + L Q + NL++
Sbjct: 445 VENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRN 504
Query: 453 TRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLV 512
+M T G + ++E + S + +++G A A +LS + + +G V + L+
Sbjct: 505 KELMLTSGVIP-LLEKMISCS--QSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLL 561
Query: 513 KGGPTSSKRDALVAILNLAGDRETVGRLVERGIV---EIVAEAMDVL-PEESVTIL-EAV 567
+ T K DAL A+ NL+ + L+ I+ +++A + L E+S+ +L
Sbjct: 562 QDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLA 621
Query: 568 VKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGS--EMVADIAAVPG 625
R G ++ I L +L G +E A + LV +C S +MV +P
Sbjct: 622 SSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPS 681
Query: 626 I 626
+
Sbjct: 682 L 682
Score = 69 (29.3 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 33/161 (20%), Positives = 72/161 (44%)
Query: 369 TKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTA 428
+ SF +N L + DA++ L +LS T S + + + I L + T
Sbjct: 549 SSQAVSFFVNLLLQDTKTQCKLDALHALYNLS-TYSPNIPTLLSSNIIKSL--QVLASTG 605
Query: 429 SRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSL 488
+ L ++ ++ +LNL+ K ++ T+G ++ + VL +G T E + + +
Sbjct: 606 NHLW-IE-KSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILC 663
Query: 489 SGVHAHRKTLGRKTRVVKGLMDL-VKGGPTSSKRDALVAIL 528
+G + + + ++ V+ L+ + V G P + + +L
Sbjct: 664 TGSESCIQMVLQEG-VIPSLVSISVNGSPRGRDKSQKLLML 703
Score = 66 (28.3 bits), Expect = 2.7e-25, Sum P(3) = 2.7e-25
Identities = 47/209 (22%), Positives = 94/209 (44%)
Query: 63 KLLSLF--FEELLANQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETA 120
K+LS+F EE S LC ++I L++ K +++ C SK++L + +
Sbjct: 32 KVLSIFPSLEEARPRSKSGIQ---TLC--SLHIALEKAKNILQHCSECSKLYLAITGDAV 86
Query: 121 ANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQV 180
F + S L+D + E + + ++ I + + TK L+D + ++ ++
Sbjct: 87 LLKFEKAK---SALIDSLRRVEDIVPSSIGSQILDIVGEL-EHTK-FLLDPSEKEVGDRI 141
Query: 181 LTTLDQIKK-EIVPDHS---ILKQMFESLGL---RNSSACKXXXXXXXXXXQNQTDQKSK 233
+ L Q KK + D + I Q L + R++ A + + + D++ +
Sbjct: 142 IALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAERRALKKVIDRARVEEDKRKE 201
Query: 234 HFAAALIGLVR-YTKCVLFGASVQ-KSDS 260
A L+ L+R Y+K LF + + ++DS
Sbjct: 202 SIVAYLLHLMRKYSK--LFRSEMMDENDS 228
Score = 44 (20.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 295 GQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLI 336
G+ +D S S +E H + T + + L ALK +I
Sbjct: 148 GKKFDNGSDSTELEIFHQAATRLSITSSRSALAERRALKKVI 189
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 280 (103.6 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 104/355 (29%), Positives = 164/355 (46%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNT-CPKTGQTLAHTNLVTNTA 331
+P FRCPISLELM++PV V TGQTYDR SI W+ G+NT CP T L+ L+ N
Sbjct: 14 IPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHT 73
Query: 332 LKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLA----TSQSME 387
L+ LI WC R S V + T K + T + A L+++ + T S+
Sbjct: 74 LRRLIQEWCVANR--------SNGVERIPTPKQPADPTSVRA--LLSQASAITGTHVSVR 123
Query: 388 AANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSI 447
+ A+ LR ++ +R IA A +L + L +T S L ++ ++ L I
Sbjct: 124 SRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSS--ELVSESLALLVMLPI 181
Query: 448 LEANK-TRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLS-GVHAH--RKTLGRKTR 503
E N+ I G + + +L + E + NAAA I +S G + + ++
Sbjct: 182 TEPNQFVSISSDPGRVEFLTRLLFDSSI-ETRVNAAALIEIVSTGTKSADLKGSISNSES 240
Query: 504 VVKGLMDLVKGGPTSSKRDALVAILNL---AGDRETVGRLVERGIVEIVAE--AMDVL-- 556
V +G++DL++ P SS+R + I L + T + G EI+ + A D
Sbjct: 241 VFEGVLDLLRN-PISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRC 299
Query: 557 -PEESVTILEAVVKRG-GLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTIC 609
E ++ +E + + G A T+ L + SD + E AA L+ +C
Sbjct: 300 DTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALC 354
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 276 (102.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 107/381 (28%), Positives = 172/381 (45%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTAL 332
+P FRCPISL+LM +PV ++TGQTYDR SI WI G+ TCP T L+ L+ N L
Sbjct: 14 IPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTL 73
Query: 333 KNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLA---TSQSMEAA 389
+ LI WC R S V + T K + + S L A T S+ +
Sbjct: 74 RRLIQEWCVANR--------SNGVERIPTPKQPADPISVR-SLLSQASAITGTHVSVRSR 124
Query: 390 NDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPD--TASRLPNLQVNAVTTILNLSI 447
A+ LR L++ +R IA A +L R L D T S L ++ ++ L +
Sbjct: 125 AAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHM 184
Query: 448 LEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATI-FSLSGVHAH--RKTLGRKTRV 504
E + + ++ + G + L ++ E + NAAA I L+G + + + +
Sbjct: 185 TET-ECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSI 243
Query: 505 VKGLMDLVKGGPTSSKRDALV---AILNLAGDRETVGRLVERG----IVEIVAEAMDVLP 557
+G++DL+K P SS+R + AI L ++T + G +++ +A D
Sbjct: 244 FEGVLDLLKN-PISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCD 302
Query: 558 -EESVTILEAVVKRG-GLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSE 615
E + +E + + G A T+ + + SD + E AA L+ +C E
Sbjct: 303 TERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCT--AEE 360
Query: 616 MVADIAAVPGIERVIWELMES 636
D AA G+ + L++S
Sbjct: 361 RCRDEAAAAGLVTQLLLLVQS 381
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 277 (102.6 bits), Expect = 8.5e-21, P = 8.5e-21
Identities = 141/583 (24%), Positives = 252/583 (43%)
Query: 72 LLANQVSFFSPPTVLC---FEEMYIVLQRMKTLIEDCYN-GSKMWLLMQIETAANNFHEL 127
+L N + + P+ L FEE+ + ++ + ++++ +++IE+ A+ E
Sbjct: 51 VLENLIDSDAAPSELLNNGFEELAQYVDELREQFQSWQPLSTRIFYVLRIESLASKLRES 110
Query: 128 TIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQI 187
++++ LL Q L D++ ++C + K LV D++ + L
Sbjct: 111 SLEVFQLLKHCE-QHLPA-----DLISPSFEECIELVK--LVAR--DEISYTIDQALKDQ 160
Query: 188 KKEIVPDHSILKQMFESLGLRNSSACKXXXXXXXXXXQNQ--TDQKSKHFAAALIGLVRY 245
KK + P +L ++ ES GLR++ ++ TD ++ A L GL+
Sbjct: 161 KKGVGPTSEVLVKIAESTGLRSNQEILVEGVVLTNMKEDAELTDNDTE--AEYLDGLISL 218
Query: 246 TKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISL 305
T + + S +++ + VP+DFRC +SLELM +PV+VA+GQT++R I
Sbjct: 219 T------TQMHEYLSDIKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQK 272
Query: 306 WIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRI----PFDYAASSEKVNGVVT 361
WI+ G CPKT Q L+HT L N ++ +A WC + P + SSE +V
Sbjct: 273 WIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNVYPPDPLELIHSSEPFPLLV- 331
Query: 362 NKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRA-CIAEAGAIALLA 420
E+ + ++S + S+S++A RS S S C + A
Sbjct: 332 -----ESVRASSS----ENGHSESLDAEELRQVFSRSASAPGIVSEVVCKTKRNNNAAAD 382
Query: 421 RHLG-PDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKG 479
R L +T + P + I+ ++ E + +ETE + +I+ L+S + + +
Sbjct: 383 RSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSSSIETE--VKKLIDDLKSSSL-DTQR 439
Query: 480 NAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGR 539
A A I L+ + + + + L+ L+ + DA+ +LNL+ +
Sbjct: 440 EATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSL 499
Query: 540 LVERG-IVEIVAEAMDVLPEES-----VTILEAVVKRGGLTAIVAAYNTIKKLCILLREG 593
+ E G IV ++ EE+ T+ V T I A I+ L LL G
Sbjct: 500 IAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSG 558
Query: 594 SDTSRESAAATLVTIC-RKGGSEMVADIAAVPGIERVIWELME 635
S + ++ AA L + V + AV R + ELM+
Sbjct: 559 SLSGKKDAATALFNLSIHHENKTKVIEAGAV----RYLVELMD 597
Score = 164 (62.8 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 66/232 (28%), Positives = 117/232 (50%)
Query: 376 LINKL-ATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNL 434
L++ L +T + ++A DAV L +LS D++ ++ IAE+GAI L L L
Sbjct: 468 LVSLLYSTDERIQA--DAVTCLLNLSINDNN-KSLIAESGAIVPLIHVL---KTGYLEEA 521
Query: 435 QVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAH 494
+ N+ T+ +LS++E KT I E GA+ ++++L SG+ K +AA +F+LS +H
Sbjct: 522 KANSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSL-SGKKDAATALFNLS-IHHE 578
Query: 495 RKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD 554
KT + V+ L++L+ ++ A+V + NLA RE + E G + ++ E ++
Sbjct: 579 NKTKVIEAGAVRYLVELMDPAFGMVEK-AVVVLANLATVREGKIAIGEEGGIPVLVEVVE 637
Query: 555 V---LPEESVT--ILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESA 601
+ +E+ T +L+ V I L L + G+ +E A
Sbjct: 638 LGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKA 689
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 264 (98.0 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 92/376 (24%), Positives = 173/376 (46%)
Query: 259 DSRLRRKKS-ASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN-TCPK 316
+S+ R+++S +S VP +F+C +S +M +PV++ +GQTY+++ I+ W+ H+ TCP
Sbjct: 59 ESKKRKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN--HDLTCPT 116
Query: 317 TGQTLAHTNLVTNTALKNLIALWCREQRI--PFDYAASSEKVNGVVTN--KAALEATKMT 372
Q L L N + LI WC + P + + V + T+ ++ L+
Sbjct: 117 AKQVLYRVCLTPNHLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSP 176
Query: 373 ASFLINKLATSQSMEAANDAVYELRSLS-KTDSDSRACIAEAGAIALLARHLGPDTASRL 431
+S + ++ ++ + + +R K DS + ++ LG + S
Sbjct: 177 SSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSV------LGDEVDSN- 229
Query: 432 PNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGV 491
P LQ N VT + N+S E NKT + E + + + ++ G+ + NA T+ SLS +
Sbjct: 230 PELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSV-VTRRNATLTLASLSDI 288
Query: 492 HAHRKTLGRKTRVVKGLMDLV-KGGPTSSKRDALVAILNLAGD-RETVGRLVERGIVEIV 549
+++ +G +K L+DL+ + S+ DAL A+++L D RE + + G+
Sbjct: 289 DSNKIIIGNSV-ALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAA 347
Query: 550 AEAMDVLPE--ESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSD-TSRESAAATLV 606
+ + ES+ L + + VA I L +LR+ S + E+A +
Sbjct: 348 IKNIKARRNLFESLAALALISPHERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVG 407
Query: 607 TICRKGGSEMVADIAA 622
+ K + I A
Sbjct: 408 NMYAKSRERSIKKILA 423
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 252 (93.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 99/382 (25%), Positives = 181/382 (47%)
Query: 252 GASVQKSDS-RLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESG 310
G SV K + + + +P+ F+CPIS ELM++PV++A+G TYDR++I W ESG
Sbjct: 11 GGSVSKKEIIPVTSCSEEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESG 70
Query: 311 HNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATK 370
+ TCP T L + N ++ +I WC E++ T + + T
Sbjct: 71 YQTCPVTNTVLTSLEQIPNHTIRRMIQGWCGSS-----LGGGIERIP---TPRVPV--TS 120
Query: 371 MTASFLINKL--ATSQSMEAA-NDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDT 427
S + +L AT + AA + V ++ L K +R C+ E GA +L +
Sbjct: 121 HQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFS 180
Query: 428 ----ASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAA 483
AS L V+ +T +L + + +K + T + N ++E+LR+G NAA
Sbjct: 181 ENANASLLLEETVSVLTWMLPIGLEGQSK---LTTTSSFNRLVELLRNGDQ-----NAAF 232
Query: 484 TIFSLSGVHA-HRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLA-GDRETVGRLV 541
I L ++ H L + V + M + T ++L++I ++ ++ETV R +
Sbjct: 233 LIKELLELNVTHVHALTKINGVQEAFMKSINRDSTCV--NSLISIHHMILTNQETVSRFL 290
Query: 542 ERGIVEIVAEAM----DVLPEESVTILEAVVK-RGGLTAIVAAYNTIKKLCILLREGSDT 596
E +V I E + + + E+++T+L + + + G + N + + IL+++
Sbjct: 291 ELDLVNITVEMLVDSENSVCEKALTVLNVICETKEGREKV--RRNKLV-IPILVKKILKI 347
Query: 597 S-RESAAATLVTICRKG-GSEM 616
S ++ + + +C+ G GSE+
Sbjct: 348 SEKKDLVSVMWKVCKSGDGSEV 369
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 252 (93.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 92/363 (25%), Positives = 170/363 (46%)
Query: 255 VQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTC 314
++K +S+ + S VP +F C +S ++M P+++A+GQT+++ I W++ TC
Sbjct: 48 LRKIESK-NPESDISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTC 105
Query: 315 PKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTAS 374
P+T Q L H ++ N + +I WC FD +S++V + T LE+
Sbjct: 106 PRTKQVLYHRFMIPNHLINEVIKEWCLIHN--FDRPKTSDEVIDLFTGD--LES------ 155
Query: 375 FLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIA-LLARHLGPDTASR--L 431
L+ ++++ S+E +A EL +K S C+ I + R L P + S
Sbjct: 156 -LLQRISSPSSVEDQTEAAKELALKAKRFSS--VCVYFVAKIPDSITRLLTPLSISEDSN 212
Query: 432 PNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGV 491
P N VT + S E NKT + E L + + ++ G T + ++AAT+ SLS
Sbjct: 213 PEFLENIVTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQG-TVLTRIHSAATVNSLSYT 271
Query: 492 HAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAE 551
+++ +G + V+K L+ +++ G + + +A A+ NL +E + V G++ +
Sbjct: 272 DSNKIIIGN-SEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIK 330
Query: 552 AMDVLPEESVTI-LEAVVKRGG--LTAIVAAYNTIKKLCILLREGSD-TSRESAAATLVT 607
+ S+ + L A V T + I L +LR + + E+A +
Sbjct: 331 KIKAGSNVSMLLSLLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYN 390
Query: 608 ICR 610
IC+
Sbjct: 391 ICK 393
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 249 (92.7 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 83/378 (21%), Positives = 167/378 (44%)
Query: 269 SDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVT 328
S+ +P +F+CPIS++LM++PV+++TG TYDR SI WI SG+ TCP T L + +
Sbjct: 27 SEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP 86
Query: 329 NTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKM-TASFLINKLATSQSME 387
N ++ +I WC E+ P + + T + L ++ S ++ E
Sbjct: 87 NHTIRKMIQGWCVEKGSPL--------IQRIPTPRVPLMPCEVYEISRKLSSATRRGDYE 138
Query: 388 AANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSI 447
+ +++ L +R C+ E +L + +N + ++L
Sbjct: 139 KCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTWMF 198
Query: 448 ---LE-----ANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLG 499
LE A+ T G L + +R A + K I SL H +
Sbjct: 199 PIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMK-----EILSLDETRVH--SFA 251
Query: 500 RKTRVVKGLMDLVKGGPTSSK-RDALVAILNLAGDR-ETVGRLVERGIV----EIVAEAM 553
+ V + L+ L++ +SS + +L+AI + + E +E G+V E++ +A
Sbjct: 252 VENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAE 311
Query: 554 DVLPEESVTILEAVVKRGGLTAIVAAYNTIKKLCIL-LREGSDTSRESAAATLVTICRKG 612
+ + E+++ +L+A+ + V + L + + + S+ + S+ + ++ + + G
Sbjct: 312 NSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTG 371
Query: 613 GSEMVADIAAVPGIERVI 630
+ V D + ++V+
Sbjct: 372 NTVAVEDAVRLGAFQKVL 389
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 243 (90.6 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 78/255 (30%), Positives = 130/255 (50%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQ 435
LI L +S S+E A E+R LSK ++R +A+AGAI L + ++S L LQ
Sbjct: 65 LITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLI---SSSDL-QLQ 120
Query: 436 VNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHR 495
VT +LNLS+ + NK I+ + GA+ ++ LR G T K NAA + LS V ++
Sbjct: 121 EYGVTAVLNLSLCDENKEMIVSS-GAVKPLVNALRLG-TPTTKENAACALLRLSQVEENK 178
Query: 496 KTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAM-D 554
T+GR + + L++L++ G +K+DA A+ +L E R VE GI++ + E M D
Sbjct: 179 ITIGR-SGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMID 237
Query: 555 V---LPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRK 611
+ ++S ++ ++ V + L ++ G+ +E + + L+ +C +
Sbjct: 238 FESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGTQRQKEISVSILLQLCEE 297
Query: 612 GG--SEMVADIAAVP 624
MVA AVP
Sbjct: 298 SVVYRTMVAREGAVP 312
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 162 (62.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 69/270 (25%), Positives = 135/270 (50%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQ 435
+ NKL + +++ + +LR ++++ +R + ++LL R L SR +Q
Sbjct: 188 IYNKLTSVDTIDHEQGLI-QLRKTTRSNETTRISLCTDRILSLL-RSL---IVSRYNIVQ 242
Query: 436 VNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHR 495
NA +I+NLS+ + NK +I+ + G + +I+VL+SG+T EA+ + +FSL+ ++
Sbjct: 243 TNAAASIVNLSLEKPNKLKIVRS-GFVPLLIDVLKSGST-EAQEHVIGALFSLAVEEENK 300
Query: 496 KTLGRKTRVVKGLMDLVKGGPTS-SKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD 554
+G V+ L+ ++ + +++DA +A+ +L+ RLV+ G V ++ +M
Sbjct: 301 MVIG-VLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMML-SMI 358
Query: 555 VLPEESVTILEAVVKRGGLTAIVAAY---NTIKKLCILLREG----SDTS-RESAAATLV 606
E + IL + + A N + L LRE SD + RE+ L+
Sbjct: 359 RSGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALL 418
Query: 607 TICRKGGSEMVADIAAVPGIERVIWELMES 636
T+ G+ +A+ G E ++ E++ES
Sbjct: 419 TL--SVGNMRFRGLASEAGAEEILTEIVES 446
Score = 134 (52.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 43/145 (29%), Positives = 71/145 (48%)
Query: 269 SDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKT--GQTLAHTNL 326
S P +F CPI+ LM +PVVVA+GQT++R IS+ + + PK G + +
Sbjct: 6 SPGETPTEFLCPITGFLMSDPVVVASGQTFER--ISVQVCRNLSFAPKLHDGTQPDLSTV 63
Query: 327 VTNTALKNLIALWCREQRIPFDYAASSEKVNGVV-TNKAAL---EATKMTASFLINKLAT 382
+ N A+K+ I WC ++ V GVV T +L ++ S ++ +A
Sbjct: 64 IPNLAMKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMDSLPPGSGHRIAKSEILPPVAE 123
Query: 383 SQSMEAANDAVY-ELRSLSKTDSDS 406
+ + + D+V +RS S+T S
Sbjct: 124 NSNSNSDYDSVMGAIRSRSRTSLSS 148
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 235 (87.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 82/291 (28%), Positives = 144/291 (49%)
Query: 340 CREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSL 399
C R ASSE +++ A E + + L++ L +S S++ A E+R L
Sbjct: 33 CNSDRSGEFPTASSESRRLLLS--CASENSDDLINHLVSHLDSSYSIDEQKQAAMEIRLL 90
Query: 400 SKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETE 459
SK ++R IA+AGAI L + ++S L LQ VT ILNLS+ + NK I +
Sbjct: 91 SKNKPENRIKIAKAGAIKPLISLI---SSSDL-QLQEYGVTAILNLSLCDENKESIASS- 145
Query: 460 GALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSS 519
GA+ ++ L+ G T AK NAA + LS + ++ +GR + + L++L++ G +
Sbjct: 146 GAIKPLVRALKMG-TPTAKENAACALLRLSQIEENKVAIGR-SGAIPLLVNLLETGGFRA 203
Query: 520 KRDALVAILNLAGDRETVGRLVERGI----VEIVAEAMDVLPEESVTILEAVVKRGGLTA 575
K+DA A+ +L +E R V+ GI VE++A+ + ++S ++ ++
Sbjct: 204 KKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLMSVPESKP 263
Query: 576 IVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGG--SEMVADIAAVP 624
+ + L ++ G+ +E A + L+ +C + MVA A+P
Sbjct: 264 AIVEEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEESVVYRTMVAREGAIP 314
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 59/215 (27%), Positives = 100/215 (46%)
Query: 380 LATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAV 439
L +S ++ V + +LS D +++ IA +GAI L R L T P + NA
Sbjct: 113 LISSSDLQLQEYGVTAILNLSLCD-ENKESIASSGAIKPLVRALKMGT----PTAKENAA 167
Query: 440 TTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLG 499
+L LS +E NK I + GA+ ++ +L +G + AK +A+ ++SL + K
Sbjct: 168 CALLRLSQIEENKVAIGRS-GAIPLLVNLLETGG-FRAKKDASTALYSLCSAKEN-KIRA 224
Query: 500 RKTRVVKGLMDLVKG-GPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDV--- 555
++ ++K L++L+ G + A V L L E+ +VE G V ++ E ++V
Sbjct: 225 VQSGIMKPLVELMADFGSNMVDKSAFVMSL-LMSVPESKPAIVEEGGVPVLVEIVEVGTQ 283
Query: 556 ------------LPEESVTILEAVVKRGGLTAIVA 578
L EESV V + G + +VA
Sbjct: 284 RQKEMAVSILLQLCEESVVYRTMVAREGAIPPLVA 318
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 228 (85.3 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 98/385 (25%), Positives = 168/385 (43%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P + RCPISL+LM +PV++A+GQTY+R I W GHNTCPKT Q L H +L N +K
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 334 NLIALWCREQ--RIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQ------- 384
LIA WC + +IP S + + + AL ++ T S +N + + +
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQD----LDYWRLALSDSESTKSQSVNSIGSYKLKGVKIV 388
Query: 385 SMEAANDAVYELRSLSKT---DSDSRACIAEAGAIALLARHLGPDTASRL---PNLQVNA 438
+E V E ++ ++ D D E I +L R+ D + L L+
Sbjct: 389 PLEENGTTVVERQNTEESFVSDDDDE----EDSDINVLERY--QDLLAVLNEEEGLEKKC 442
Query: 439 -VTTILNLSILEANKTRI-METEGALNGVIEVLRSGA---TWEAKGNAAATIFSLSGVHA 493
V + L + + + RI M G + ++ L S A+ + A +F+L+ +
Sbjct: 443 KVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNN 502
Query: 494 HRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAM 553
K L + V++ L ++ + AL LNL+ E + V + + +
Sbjct: 503 RNKELMLTSGVIRLLEKMISSAESHGSATALY--LNLSCLDEAKSVIGSSQAVPFLVQLL 560
Query: 554 --DVLPEESVTILEAVVKRGGLTAIVAAY---NTIKKLCILLRE-GSDTSRESAAATLVT 607
++ + + L A+ + + A N IK L LL G + E + A L+
Sbjct: 561 QKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLN 620
Query: 608 IC--RKGGSEMVADIAAVPGIERVI 630
+ ++G E V+ + + V+
Sbjct: 621 LASSQEGKDEAVSSQGMISSLATVL 645
Score = 165 (63.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 64/260 (24%), Positives = 116/260 (44%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQ 435
L+ L + +E V ++R L K D ++R + G + L R LG Q
Sbjct: 428 LLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQ 487
Query: 436 VNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHR 495
+ + NL++ +M T G + ++E + S A E+ G+A A +LS + +
Sbjct: 488 DSGAMALFNLAVNNNRNKELMLTSGVIR-LLEKMISSA--ESHGSATALYLNLSCLDEAK 544
Query: 496 KTLGRKTRVVKGLMDLV-KGGPTSSKRDALVAILNLAGDRETVGRLVERGIVE----IVA 550
+G ++ V L+ L+ K T K DAL A+ NL+ + L+ I++ ++A
Sbjct: 545 SVIG-SSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLA 603
Query: 551 EAMDVL-PEESVTIL-EAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTI 608
+ L E+S+ +L + G V++ I L +L G T +E A + L+ +
Sbjct: 604 STGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLIL 663
Query: 609 C--RKGGSEMVADIAAVPGI 626
C R+ +MV +P +
Sbjct: 664 CNGRESCIQMVLQEGVIPSL 683
Score = 64 (27.6 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 46/208 (22%), Positives = 94/208 (45%)
Query: 63 KLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAAN 122
K+LS+F L + S LC ++I L++ K +++ C SK++L + +
Sbjct: 32 KVLSIF-PSLEGARPRSKSGIQALC--SLHIALEKAKNILQHCSECSKLYLAITGDAVLL 88
Query: 123 NFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLT 182
F + I L+D + E + + ++ I + + T+ ++D + ++ Q++
Sbjct: 89 KFEKAKI---ALIDGLKRVEDIVPSSIGSQILEIVGEL-ENTR-FMLDPSEKEVGDQIIA 143
Query: 183 TLDQIKK-EIVPDHSILKQMFESLGLR---NSS----ACKXXXXXXXXXXQNQTDQKSKH 234
L Q KK + D++ L ++F R SS A + + + D++ +
Sbjct: 144 LLQQGKKFDNCNDNTEL-EIFHRAATRLSITSSRVALAERRALKKLIDRARAEEDKRKES 202
Query: 235 FAAALIGLVRYTKCV-LFGASV-QKSDS 260
A L+ L+R KC LF + + ++DS
Sbjct: 203 IVAYLLHLMR--KCSKLFRSEILDENDS 228
Score = 39 (18.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 295 GQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLI 336
G+ +D + + +E H + T + L ALK LI
Sbjct: 148 GKKFDNCNDNTELEIFHRAATRLSITSSRVALAERRALKKLI 189
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 221 (82.9 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 86/358 (24%), Positives = 160/358 (44%)
Query: 270 DANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGH-NTCPKTGQTLAHTNLVT 328
+ +P F CPISLE+M++PV+V+TG TYDR SI W+ +G N+CP T Q + +L
Sbjct: 9 EIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTP 68
Query: 329 NTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEA 388
N L+ LI WC +S V + T + + K LI A+S +
Sbjct: 69 NHTLRRLIQSWCTLN--------ASYGVERIPTPRPPI--CKSEIEKLIRDSASSHENQV 118
Query: 389 ANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSIL 448
+ LR + ++ ++ C+ AG LA + D+ + +L A+ + +L
Sbjct: 119 K--CLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENG--SLTDEALNLLYHLETS 174
Query: 449 EANKTRIMETE---GALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRK---- 501
E ++ + + + ++++ G +E++ A + ++ V +++ K
Sbjct: 175 ETVLKNLLNNKKDNNIVKSLTKIMQRGM-YESRVYATLLLKNILEVADPMQSMTLKPEVF 233
Query: 502 TRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEA-MDVL---- 556
T VV+ L D + T + LV I +R + VE G++ ++ E MD
Sbjct: 234 TEVVQILDDRISQKATKAAMHILVNICPWGRNRH---KAVEAGVISVIIELLMDESFTSE 290
Query: 557 ---PEESVTILEAVVKRG-GLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICR 610
PE ++ +L+ + + G + I +C + S T+ + A L+++ R
Sbjct: 291 RRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGR 348
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 218 (81.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 74/248 (29%), Positives = 124/248 (50%)
Query: 367 EATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPD 426
E + T I+ L +S S+ A +LR L+K +D+R I E+GAI L P
Sbjct: 179 EDLQPTVKLCIDGLRSS-SVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALI----PL 233
Query: 427 TASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIF 486
P Q +AVT +LNLS+ + NK ++ GA+ ++ VL++G T +K NAA +
Sbjct: 234 LRCNDPWTQEHAVTALLNLSLHDQNKA-VIAAGGAIKSLVWVLKTG-TETSKQNAACALL 291
Query: 487 SLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERG-- 544
SL+ + ++ ++G + L+ L+ G K+DAL + L ++ R V G
Sbjct: 292 SLALLEENKGSIGA-CGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAV 350
Query: 545 --IVEIVAEAMDVLPEESVTILEAVVK-RGGLTAIVAAYNTIKKLCILLREGSDTSRESA 601
+V++VAE + E+++ +L ++ G AIV I L + +GS +E A
Sbjct: 351 KPLVDLVAEEGTGMAEKAMVVLSSLAAIDDGKEAIVEE-GGIAALVEAIEDGSVKGKEFA 409
Query: 602 AATLVTIC 609
TL+ +C
Sbjct: 410 ILTLLQLC 417
Score = 42 (19.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 17 AGAFISPTLSDLKLVESLL----ILSQEVSSMKPLQFL 50
A F+S ++ D++L E L L+ SSMK FL
Sbjct: 69 ASEFLSDSVIDMRLGELALKNSNSLNSNASSMKEEAFL 106
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 64/268 (23%), Positives = 134/268 (50%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQ 435
L+ KL +++ E +A+ +R +++ D SR + I+ L + SR +Q
Sbjct: 233 LLTKLKSNRISEI-EEALISIRRITRIDESSRISLCTTRVISALKSLI----VSRYATVQ 287
Query: 436 VNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHR 495
VN ++NLS+ ++NK +I+ + G + +I+VL+ G+ EA+ ++A IFSL+ ++
Sbjct: 288 VNVTAVLVNLSLEKSNKVKIVRS-GIVPPLIDVLKCGSV-EAQEHSAGVIFSLALEDENK 345
Query: 496 KTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDV 555
+G ++ L+ L++ G ++ D+ +A+ +L+ + G+LV+ G V+++ M
Sbjct: 346 TAIG-VLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLL-GMVS 403
Query: 556 LPEESVTILEAVVKRGGLT----AIVAAYNTIKKLCILLR--EGSDTSRESAAATLVTIC 609
L + +L + A++ + + +L R E ++++RES A L +
Sbjct: 404 LGQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLS 463
Query: 610 RKGGSEMVADIAAVPGIERVIWELMESG 637
GG A +E ++ ++ SG
Sbjct: 464 HDGGLRFKGLAMAANAVEELV-KVERSG 490
Score = 148 (57.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 55/224 (24%), Positives = 95/224 (42%)
Query: 256 QKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCP 315
+ S S S + +PA+F CPIS LM +P++V++G +Y+R + G P
Sbjct: 41 RSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTP 100
Query: 316 KTGQTLAHTNLVTNTALKNLIALWCREQRI-----PFDYAASSEKVNGVVTNKAALEATK 370
+ ++ N ALK+ I WC E+R P + AA+ + + ++ K
Sbjct: 101 PPD----FSTVIPNLALKSAIHSWC-ERRCFPPPKPLNSAAAEKLILALMEKKPQRRKVS 155
Query: 371 MTASFLINKLATSQSMEAANDAVYEL-RSLSKTDSDSRACIAEAGAIALLARH---LGPD 426
++ LI + S+ N A EL R + +S S IA + L
Sbjct: 156 VSEKELIQAIRDKPSVRL-NHAATELDRRPNYFNSSSDESIASSSRTLQLTTKPSCFSSP 214
Query: 427 TASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLR 470
++ + +L+ N +T + + RI E E AL + + R
Sbjct: 215 SSGEIESLEPN-LTPEEEALLTKLKSNRISEIEEALISIRRITR 257
Score = 104 (41.7 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 53/213 (24%), Positives = 97/213 (45%)
Query: 435 QVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAH 494
Q ++ I +L++ + NKT I G L ++ ++R G T + ++A ++ LS V ++
Sbjct: 328 QEHSAGVIFSLALEDENKTAI-GVLGGLEPLLHLIRVG-TELTRHDSALALYHLSLVQSN 385
Query: 495 RKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVA---- 550
R L K V+ L+ +V G + L+ + N+A + L++ G VE +
Sbjct: 386 RGKLV-KLGAVQMLLGMVSLGQMIGR--VLLILCNMASCPVSRPALLDSGGVECMVGVLR 442
Query: 551 ---EAMDVLPEESVTILEAVVKRGGLT--AIVAAYNTIKKLCILLREGSDTSRESAAATL 605
E + E V +L + GGL + A N +++L + R G + +++ A L
Sbjct: 443 RDREVNESTRESCVAVLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVL 502
Query: 606 VTICRKGGSEMVADIAAVPGIERVIWE-LMESG 637
+ K + D V E + WE L+ SG
Sbjct: 503 EVLRAK-----IEDDDLVEN-EEIDWEELLNSG 529
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 73/310 (23%), Positives = 138/310 (44%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTAL 332
VP FRCPISL++M++PV + TG TYDR SI W++ G+NTCP T Q L + + + N L
Sbjct: 10 VPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTL 69
Query: 333 KNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDA 392
+ LI +W + S + V + T+ + I+++ + +
Sbjct: 70 QRLIEIW-----------SDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREV 118
Query: 393 VYELRSLSKTDSDSRACIA-EAGAIALLARHLGP---DTASRLPNLQVNAVTTILNLSIL 448
+ ++ + D+R +A + + LL + +T S +L V IL+
Sbjct: 119 LSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRS 178
Query: 449 EANKTR----IMETEGA--LNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTL-GRK 501
+ + R ++ T G L+ ++ + ++G E K + A + V A K L +
Sbjct: 179 KVSDRRRFSNLILTNGRDRLSVIVYLFKTGNV-ELKIDCAG-LLEFIAVDAESKLLIAER 236
Query: 502 TRVVKGLMDLV-KGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAM-DVLPEE 559
++ LM + K S +L ++ ++ + L+ ++ V + + D
Sbjct: 237 DGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSL 296
Query: 560 SVTILEAVVK 569
SV++ E +K
Sbjct: 297 SVSVTEKCLK 306
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 196 (74.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/72 (48%), Positives = 50/72 (69%)
Query: 270 DANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGH-NTCPKTGQTLAHTNLVT 328
+ +P+ F CPISL++M++PV+V+TG TYDR+SI W+ SG N+CP T Q + T+L
Sbjct: 4 EIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTP 63
Query: 329 NTALKNLIALWC 340
N L+ LI WC
Sbjct: 64 NHTLRRLIQSWC 75
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 76/272 (27%), Positives = 133/272 (48%)
Query: 368 ATKMTASFLINKLAT-SQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPD 426
A + T S ++++L++ S+ AA A+ ELR +SK D DSR IA+AGAI LA L
Sbjct: 4 AKRRTMSTIVSRLSSVSEQTRAA--ALAELRLISKQDPDSRLIIADAGAIPYLAETLYSS 61
Query: 427 TASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKG---NAAA 483
+ S Q NA T+LNLSI ++ +M + G L+ + LR T + ++AA
Sbjct: 62 SHSS----QENAAATLLNLSI--TSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAA 115
Query: 484 TIFSLS-GVHAHRKTLGRKTRVVKGLMDLVK---GGPTSSKRDALVAILNLAGDRETVGR 539
TI+SL ++R +G K ++ L+ +++ P S K D+L A+ +A
Sbjct: 116 TIYSLLIAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIK-DSLKALFAIALYPMNRST 174
Query: 540 LVERGIVE-----IVAEAMDVLPEESVTILEAVV----KRGGLTAIVAAYNTIKKLCILL 590
++ G + IV ++ + E++ ++ V G+ + A N + L
Sbjct: 175 MISLGAIPALFSLIVKDSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGA-NVLADLLDPC 233
Query: 591 REGSDTSRESAAATLVTICRKGGSEMVADIAA 622
S +E++ L+ + R GG+ +++AA
Sbjct: 234 TGSSLRIKENSVGALLNLARCGGAAARSEVAA 265
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 195 (73.7 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 264 RKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAH 323
R ++ + VP+ F+CPISL++MR+PV + TG TYDR SI W++ G+NTCP T Q L
Sbjct: 3 RDETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKT 62
Query: 324 TNLVTNTALKNLIALW 339
+ V N L+ LI +W
Sbjct: 63 KDFVPNLTLQRLINIW 78
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 194 (73.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 90/377 (23%), Positives = 168/377 (44%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTAL 332
VP F+CPISL++M++PV ++TG TYDR SI W++ G+NTCP T Q L + V N L
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTL 70
Query: 333 KNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDA 392
LI W + A SE + + A F I A S+ + A ++
Sbjct: 71 HRLIDHWSDS----INRRADSESPESDTPTRDEINAA--IERFRIENDARSKILRFARES 124
Query: 393 VYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANK 452
L+ D D A + + + +R+ D+ L V + +++ I + +
Sbjct: 125 DENREFLAGKD-DFVAMLVD---LISDSRNFS-DSQLLLVGEAVK-ILSMIRRKIFDRRR 178
Query: 453 -TRIMETEGA--LNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTR-VVKGL 508
+ ++ T G L +++ G + K + +A + V A K + K +V +
Sbjct: 179 LSNLILTNGGDCLTSFFLLIKRGNP-KLKIDCSA-VLEFIAVDAESKLIIAKGEGLVTEI 236
Query: 509 MDLVKGGPTSSKRDALVAIL-NLAGDRETVGRLV-ERGIVEIVAEAMDVLPEESVT---- 562
+ L+ SS +A +++L +A + L+ E+ + ++ + D SVT
Sbjct: 237 IKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKCL 296
Query: 563 -ILEAVVK-RGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVAD- 619
+LEA+ + G + I ++ + L + S + E A L ++C + D
Sbjct: 297 KLLEAISSCKEGRSEICDGV-CVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQDA 355
Query: 620 IAAVPGIERVIWELMES 636
+ + G+ +++ L++S
Sbjct: 356 VIRINGVTKILL-LLQS 371
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 193 (73.0 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 100/373 (26%), Positives = 171/373 (45%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVT-NTA 331
+P+ F CPISLE M++PV + TGQTY+R +I W GH TCP T Q L +LVT N
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQEL-WDDLVTPNKT 118
Query: 332 LKNLIALWCREQRIPFDYAASSEKVNG-VVTNKAALEATKMTASFLINKLATSQSMEAAN 390
L LI W ++ + SE V G + L K A ++ L+ + + A+
Sbjct: 119 LHQLIYTWFSQKYVLMK--KRSEDVQGRAIEILGTLRKAKGKAK--VHALSELKQVVMAH 174
Query: 391 DAVYELRSLSKTDSDSRACIAEAGAIALLARH-LGPDTASRLPNLQVNAVTTILNLSILE 449
A+ + KT D + ++ H +G + + L NL++++ + +
Sbjct: 175 -AIAK-----KTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPAR 228
Query: 450 ANKTRIMETEGALNGVIEVLRS-GATWEAKGNAAATIFSLSG-VHAHRKTLGRKTRV-VK 506
+ M +G++ I R G E KG A + S S V R R+ R V
Sbjct: 229 VSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGVS 288
Query: 507 GLMDLVKGGPTSSK-RDALVAILNLAGDRETVGRLVERGIVEIVAEAMDVLPEESVTILE 565
+ L+K + R+ LV I G V +LV+ ++ + ++ L E ++ +L+
Sbjct: 289 PALTLLKSVSVHKQVRNLLVRI----G---AVPQLVD--VLPCLD--VECL-ESALFVLD 336
Query: 566 AV-VKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVP 624
++ ++ G A+ + NTI LL + S+ A + L ++C K SE + +A
Sbjct: 337 SLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVC-KLASEECSSLAVEV 395
Query: 625 GIERVIWELMESG 637
G+ + +++SG
Sbjct: 396 GLAAKLLLVIQSG 408
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 193 (73.0 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 99/400 (24%), Positives = 175/400 (43%)
Query: 252 GASVQKSDSRLRRKKSASDAN---VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIE 308
G V D +L KK + + +P+ F CPISLE M++PV + TGQTY+R +I W
Sbjct: 40 GGGVGVVDEKLDLKKMIKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFN 99
Query: 309 SGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNG-----VVTNK 363
GH TCP T Q L + N L +LI W ++ + SE V G + T K
Sbjct: 100 LGHLTCPTTMQELWDDTVTPNKTLHHLIYTWFSQKYVLMK--KRSEDVQGRAIEILGTLK 157
Query: 364 AALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDS-----DSRACIAEAGAIAL 418
A ++ A + ++ + M A V E +S S S A +E AI L
Sbjct: 158 KAKGQARVHALSELKQIVIAHLM--ARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAI-L 214
Query: 419 LARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAK 478
++ L D+ S L +Q V+ I+++ +N+T+I + G++E A +
Sbjct: 215 VSLDLDSDSKSGL--MQPAKVSLIVDMLNDGSNETKI-NCARLIRGLVEEKGFRAELVSS 271
Query: 479 GNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVG 538
+ + L HR + R++K P S + ++++ V
Sbjct: 272 HSLLVGLMRLVKDKRHRNGVSPALRLLK---------PISVHKQVRSLMVSIGA----VP 318
Query: 539 RLVERGIVEIVAEAMDVLPEESVTILEAVVKR-GGLTAIVAAYNTIKKLCILLREGSDTS 597
+LV+ + + E +++ ++ +L+A+ G A+ + NTI +L S+
Sbjct: 319 QLVDI-LPSLDPECLEL----ALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENC 373
Query: 598 RESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESG 637
A + L ++C+ E + +A G+ + +++SG
Sbjct: 374 TNYALSILWSVCKLAPEEC-SPLAVEVGLAAKLLLVIQSG 412
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 129 (50.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P +F CPI+ LM +PVVV++GQT++R S+ + G+ G + ++ N A+K
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMK 91
Query: 334 NLIALWCREQRIPFDYAASSEKVNGVV 360
+ I WC Q++ + V GVV
Sbjct: 92 STIFSWCDRQKVDHPRPPDAAYVEGVV 118
Score = 114 (45.2 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 57/257 (22%), Positives = 115/257 (44%)
Query: 369 TKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTA 428
T SFL + L + ++ N A + +LS + ++ I +G + LL L T
Sbjct: 274 TDRILSFLRSLLVSRYNLVQTNAAA-SVVNLS-LEKQNKVKIVRSGFVPLLIDVLKSGTT 331
Query: 429 SRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSL 488
Q + + +L++ + NK ++ GA+ ++ LRS + A+ +AA ++ L
Sbjct: 332 EA----QEHVAGALFSLALEDENKM-VIGVLGAVEPLLHALRSSESERARQDAALALYHL 386
Query: 489 SGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEI 548
S + ++R L R V L+ +V+ G ++S+ L+ + NLA + G +++ V I
Sbjct: 387 SLIPSNRTRLVR-AGAVPTLLSMVRSGDSTSR--ILLVLCNLAACPDGKGAMLDGNAVAI 443
Query: 549 VAEAM--------DVLPEESVTILEAVVKRGGLT--AIVAAYNTIKKLCILLREGSDTSR 598
+ + + E V +L + + G L + + + L + G++ +
Sbjct: 444 LVGKLREVGGGDSEAARENCVAVLLTLCQ-GNLRFRGLASEAGAEEVLMEVEENGNERVK 502
Query: 599 ESAAATLVTICRKGGSE 615
E A+ L+ + GG E
Sbjct: 503 EKASKILLAMRGGGGGE 519
Score = 72 (30.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 34/144 (23%), Positives = 61/144 (42%)
Query: 480 NAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGR 539
NAAA++ +LS + K ++ V L+D++K G T ++ A+ +LA + E
Sbjct: 295 NAAASVVNLS-LEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDENKMV 353
Query: 540 LVERGIVEIVAEAMDVLPEE------SVTILEAVVKRGGLTAIVAAYNTIKKLCILLREG 593
+ G VE + A+ E ++ + + T +V A + L ++R G
Sbjct: 354 IGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRA-GAVPTLLSMVRSG 412
Query: 594 SDTSRESAAATLVTICRKGGSEMV 617
TSR + C G M+
Sbjct: 413 DSTSRILLVLCNLAACPDGKGAML 436
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 262 LRRKKSASDAN--VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQ 319
LR++ S SD + P F CPISLE+M++P + A G TY+ ++IS W++ GH T P T
Sbjct: 312 LRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNT 371
Query: 320 TLAHTNLVTNTALKNLIALW 339
L HT LV N AL++ I W
Sbjct: 372 KLHHTKLVPNLALRSAIQEW 391
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 142 (55.0 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 270 DANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTN 329
+ +P F+C +S +M +PV++++G T++R I W + G+++CP + + L L N
Sbjct: 216 NGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPN 275
Query: 330 TALKNLIALWC 340
LK+ I+ WC
Sbjct: 276 VELKSQISEWC 286
Score = 68 (29.0 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 31/170 (18%), Positives = 64/170 (37%)
Query: 443 LNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKT 502
L L+ L N+ I E + + V E A I + H H + +
Sbjct: 446 LLLAFLSGNRRAIESLEEEVFKMFSVFLES---EVVAEEALNILEVLSNHPHGPSKITSS 502
Query: 503 RVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD--VLPEES 560
+ L+ +V+ + A++ + NL+ E +V ++ + + V + S
Sbjct: 503 GSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFLQQKVFCKHS 562
Query: 561 VTILEAVVK-RGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTIC 609
+ IL+ + G I + + + LL +E+A + L+ +C
Sbjct: 563 IIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLC 612
Score = 66 (28.3 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 25/113 (22%), Positives = 56/113 (49%)
Query: 46 PLQFLLQRS-CLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQRMKTLIED 104
P + + S CL + R V + F ++ + S LC ++ L + K L++
Sbjct: 10 PQSYKMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCL--LHNALDKTKQLLQY 67
Query: 105 CYNGSKMWLLMQIET--AANNFHELTID--LSTLLDIMP-LQELRLSQDVEDV 152
C SK+++ + + A + + +++ L+ + I+P + E+++SQ V+D+
Sbjct: 68 CSESSKLYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDL 120
Score = 65 (27.9 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 32/131 (24%), Positives = 60/131 (45%)
Query: 370 KMTASFLINKLATS-QSMEAANDAVYELRSLSKTDSDSRACIAEA-GAIALLARHLGPDT 427
+M + I KL + Q ++ L++L T+ R CI E +A +A L
Sbjct: 539 EMVSLDFIQKLTSFLQQKVFCKHSIIILKNLCSTEK-GRGCITETPDCLASIAELL---- 593
Query: 428 ASRLPNLQVNAVTTILNLSI--LEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATI 485
S +P Q NA++ +L L + +E + E + +I + +G T E K +A+ +
Sbjct: 594 ESNVPEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNG-TEEVKVSASELL 652
Query: 486 FSLSGVHAHRK 496
+L V + ++
Sbjct: 653 RALVEVDSDKE 663
Score = 60 (26.2 bits), Expect = 9.2e-10, Sum P(3) = 9.2e-10
Identities = 25/122 (20%), Positives = 59/122 (48%)
Query: 510 DLVKGGPTSSKRDALVAILNLAGDRETVGRLVER--GIVEIVAEAMDVLPEESVTILEAV 567
+++KGG D L+A L+ G+R + L E + + E+ +V+ EE++ ILE +
Sbjct: 438 EIIKGG-----LDLLLAFLS--GNRRAIESLEEEVFKMFSVFLES-EVVAEEALNILEVL 489
Query: 568 VKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIE 627
+ + + ++ L ++ ++ +E A TL + E+ ++ ++ I+
Sbjct: 490 SNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNL--SSSMEICLEMVSLDFIQ 547
Query: 628 RV 629
++
Sbjct: 548 KL 549
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 362 NKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLAR 421
N+ A+E+ + + + S+ + A +A+ L LS + I +G+++ L +
Sbjct: 454 NRRAIESLEEEVFKMFSVFLESEVV--AEEALNILEVLSN-HPHGPSKITSSGSLSSLLK 510
Query: 422 HLGPDTASRLPNLQVNAVTTILNLS 446
+ S+ +LQ A+ T+ NLS
Sbjct: 511 IV----ESQAEHLQEQAMITLKNLS 531
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 173 (66.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P+ F CPIS E+MR P V A G TY+ +S+ W+++GH T P T LAH NLV N AL+
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 334 NLIALW 339
+ I W
Sbjct: 558 SAIQEW 563
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 162 (62.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 263 RRKKSASDANVPA-DFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTL 321
+ K + SD + DF+CPIS+E+MR+P V A G TY+ + W+ SG T PKT + L
Sbjct: 222 KSKSNESDEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPL 281
Query: 322 AHTNLVTNTALKNLIALW 339
+ NLV N L+ +I W
Sbjct: 282 ENHNLVPNHTLRIIIKDW 299
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 263 RRKKSASDAN---VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQ 319
R ++ AS +N P F CPI+ ++M +P V A G TY+ ++IS W E GH T P +
Sbjct: 340 REEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINK 399
Query: 320 TLAHTNLVTNTALKNLIALW 339
L HT+LV N AL++ I W
Sbjct: 400 RLPHTSLVPNLALRSAIQEW 419
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 76/290 (26%), Positives = 133/290 (45%)
Query: 365 ALEATKMTASFLINKLATSQSMEAAND------AVYELRSLSKTDSDSRACIAEAGAIAL 418
ALE K L + A + + D A E+R L+K DS++R +A GAI
Sbjct: 130 ALEVLKRVVRELQSAAAAREDNDDGGDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPP 189
Query: 419 LARHLGPDTASRLPNLQVNAVTTILNLSI-LEANKTRIMETEGALNGVIEVLRSGAT--W 475
L + SR+ + Q+ ++ +LNL I +ANK I++ GA++ +++++ S T
Sbjct: 190 LVSMIDD---SRIVDAQIASLYALLNLGIGNDANKAAIVKA-GAVHKMLKLIESPNTPDQ 245
Query: 476 EAKGNAAATIFSLSGVHAHRKTLGRKTRV---VKGLMDLVKGGPTSSKRDALVAILNLAG 532
E A LS + +++ +G + VK L +L + + ++ DAL A+ NL+
Sbjct: 246 EIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVKTLQNLDETSSSQAREDALRALYNLSI 305
Query: 533 DRETVGRLVERGIVEIVAEAM-DV-LPEESVTILEAVVK-RGGLTAIVAAYNTIKKLCIL 589
+ V ++E ++ + + D+ + E + IL +V G AI + L +
Sbjct: 306 YQPNVSFILETDLITYLLNTLGDMEVSERILAILSNLVAVPEGRKAIGLVCDAFPVLVDV 365
Query: 590 LR-EGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGT 638
L S +E A L+ + KG + I A GIE + EL G+
Sbjct: 366 LNWTDSPGCQEKATYILMLMAHKGYGDRQVMIEA--GIESALLELTLLGS 413
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 158 (60.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 266 KSAS-DANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHT 324
+SAS D++VPA F CPIS+E+M++P V + G TY+ ++I W + G + P T L +
Sbjct: 427 QSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNL 486
Query: 325 NLVTNTALKNLIALWCREQR 344
NLV N L++ I + ++Q+
Sbjct: 487 NLVPNRVLRSFIHGYLQQQQ 506
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 159 (61.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 63/227 (27%), Positives = 100/227 (44%)
Query: 272 NVPADFRCPISLELMRNPVVVATGQTYDRQSISLWI----ESGHN-TCPKTGQTLAHTNL 326
N+ F CP++ ++M NPV + GQT++R++I W E+G +CP T + L+ T+L
Sbjct: 24 NIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDL 83
Query: 327 VTNTALKNLIALW-CREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQS 385
+ AL+N I W R + D A S + TN L A K N Q
Sbjct: 84 SPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETN--ILLALKNVREICRNIRKIRQR 141
Query: 386 MEAANDAVYEL-RSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILN 444
+ N + L + K+ S C A+ L + D S+ + + V TI+
Sbjct: 142 V--CNPQLVRLITDMLKSSSHEVRC----KALQTLQVVVEGDEESKAIVAEGDTVRTIVK 195
Query: 445 LSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGV 491
E +K R E A++ + E+ +S A E G+ I L G+
Sbjct: 196 FLSQEPSKGR----EAAVSVLFELSKSEALCEKIGSIHGAIILLVGL 238
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 65/280 (23%), Positives = 134/280 (47%)
Query: 360 VTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEA-GAIAL 418
V++ ++ ++ + + L S+ ++ A E+R L+KT R ++A +
Sbjct: 52 VSSSVSVSSSSSASIQRVLSLIRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVEPLVS 111
Query: 419 LARHLGPDTASRLPNLQVNAVTTILNLSIL-EANKTRIMETEGALNGVIEVLRSGATWEA 477
+ R P++ A+ +LNL++ E NK I+E GAL +I L+S +
Sbjct: 112 MLRFDSPESHHEA------ALLALLNLAVKDEKNKVSIIEA-GALEPIINFLQSNSP-TL 163
Query: 478 KGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETV 537
+ A+A++ +LS A+ K + VV L+ ++K G +K DA++A+ NL+ + +
Sbjct: 164 QEYASASLLTLSA-SANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNL 222
Query: 538 GRLVERG----IVEIV--AEAMDVLPEESVTILEAVVKRG--GLTAIVAAYNTIKKLCIL 589
++ I+ ++ ++ E+ +++EA++ G T +V+ + + +
Sbjct: 223 SMILATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEV 282
Query: 590 LREGSDTSRESAAATLVTICRKGGS---EMVADIAAVPGI 626
L GS +RE A L+T+C+ S E + +PG+
Sbjct: 283 LENGSLQAREHAVGVLLTLCQSDRSKYREPILREGVIPGL 322
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 156 (60.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P F CPI E+M++P V A G TY+ ++I W++S H+T P T L+HT+L+ N AL+
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 334 NLIALW 339
+ I W
Sbjct: 824 SAIQEW 829
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 253 ASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN 312
+ V +S LR K + + +P +F CPI+ ELM++PV+ + G +Y+R+++ WI
Sbjct: 382 SKVLRSIEELRAKMDSLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR 441
Query: 313 TCPKTGQTLAHTNLVTNTALKNLIALW 339
T P T L L N LK I W
Sbjct: 442 TSPMTNLALPSLVLTPNRTLKMAINRW 468
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 255 VQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTC 314
V+ ++S++ KK S+ P+ + CPI E+M P + A G TY+R++I W+E HN
Sbjct: 709 VETANSKV--KKEGSNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEK-HNIS 765
Query: 315 PKTGQTLAHTNLVTNTALKNLIALWCREQRIPF 347
P T Q L H L N L++ I W + R+ F
Sbjct: 766 PVTRQKLDHFKLTPNHTLRSAIRDW--KSRVRF 796
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 254 SVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNT 313
S++K + R SA+ + P+ F CP+ ++M+ P + A G TYDR++I W+E+ H T
Sbjct: 730 SLKKVADKARNSLSAAPSQPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMEN-HRT 788
Query: 314 CPKTGQTLAHTNLVTNTALKNLIALW 339
P T L + NL+ N L I W
Sbjct: 789 SPVTNSPLQNVNLLPNHTLYAAIVEW 814
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 148 (57.2 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 75/297 (25%), Positives = 138/297 (46%)
Query: 357 NGVVTNKA--ALEATKMTASFLINKL-ATSQSMEAANDAVYELRSLSKTDSDSRACIAEA 413
+GV T K LE K L + A +++ E A E+R L+K D ++R +A
Sbjct: 91 SGVETKKKEETLEILKRVVKDLQAEAEAEAEAAEKKIAAASEVRLLAKDDIEARVTLAML 150
Query: 414 GAIALLARHLGPDTASRLPNLQVNAVTTILNLSI-LEANKTRIMETEGALNGVIEVLRSG 472
GAI L + D S+ + + ++ +LNL I + NK I++ G ++ +++++ S
Sbjct: 151 GAIPPLVSMI--DDESQSEDALIASLYALLNLGIGNDVNKAAIVKA-GVVHKMLKLVESS 207
Query: 473 ATW-EAKGNA-AATIFSLSGVHAHRKTLGRKTRV---VKGLMDLVKGGPTSSKRDALVAI 527
+A A A LS + +++ +G + VK L + + + ++ DAL A+
Sbjct: 208 KPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEETSSSQAREDALRAL 267
Query: 528 LNLAGDRETVGRLVERGIVEIVAEAM-DV-LPEESVTILEAVVK----RGGLTAIVAAYN 581
NL+ + V ++E ++ + + D+ + E + IL VV R + +V A+
Sbjct: 268 YNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAILTNVVSVPEGRKAIGEVVEAFP 327
Query: 582 TIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGT 638
+ + +L S +E A L+ + KG + A I A GIE + EL G+
Sbjct: 328 IL--VDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNAMIEA--GIESSLLELTLVGS 380
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 31/90 (34%), Positives = 49/90 (54%)
Query: 255 VQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTC 314
+QK + LR K + VP +F CPI+ ELM++PV+ A G +Y+++++ WI + +
Sbjct: 387 LQKIEE-LRMKMVSVPVAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSS 445
Query: 315 PKTGQTLAHTNLVTNTALKNLIALWCREQR 344
P T L L N LK I+ W Q+
Sbjct: 446 PMTNLPLPSLVLTPNRTLKMAISRWLETQQ 475
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 253 ASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN 312
+ V + LR K A + +P +F CPI+ ELM++PV+ + G +Y+++++ WI
Sbjct: 384 SKVLRKIEELRTKVKALSSGIPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKR 443
Query: 313 TCPKTGQTLAHTNLVTNTALKNLIALW 339
T P T L L N LK I+ W
Sbjct: 444 TSPMTNLILPSMVLTPNRTLKMAISRW 470
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 253 ASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN 312
+ V +S LR + + + +P +F CPI+ ELM++PV+ + G +Y+R+++ WI
Sbjct: 384 SKVLRSIDELRTRMESLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKR 443
Query: 313 TCPKTGQTLAHTNLVTNTALKNLIALW 339
T P T L L N LK I W
Sbjct: 444 TSPMTNLALPSLVLTPNRTLKMAINRW 470
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 146 (56.5 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P +F CPI+ E+M++PV+ A G +Y+R++I WI + + T P T L T L N LK
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 334 NLIALWCREQ 343
I W Q
Sbjct: 478 MAIFRWSTSQ 487
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/253 (24%), Positives = 120/253 (47%)
Query: 386 MEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNL 445
+EAA + + +L S S +R+ +A+AG I L P S + + ++ +LNL
Sbjct: 63 IEAAKE-IRKLLRKSPVKSSARSKLADAGVIPPLV----PMLFSSNVDARHASLLALLNL 117
Query: 446 SIL-EANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRV 504
++ E NK I++ GA+ +I++L+ + A A I +LS A+ K + + V
Sbjct: 118 AVRNERNKIEIVKA-GAVPPLIQILKLHNA-SLRELATAAILTLSAAPAN-KAMIISSGV 174
Query: 505 VKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERG----IVEIVAEAM--DVLPE 558
L+ ++ G K DA+ A+ NL+ +E +++ ++ ++ E E
Sbjct: 175 PPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAE 234
Query: 559 ESVTILEAVVKRG--GLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSE- 615
++ ++E ++ G AI + + I L + +GS S E A L+++CR +
Sbjct: 235 KATALVEMILSHSEDGRNAITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKY 294
Query: 616 --MVADIAAVPGI 626
++ A+PG+
Sbjct: 295 RKLILKEGAIPGL 307
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 253 ASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN 312
+ V + LR K + +P +F CPI+ ELM++P++ + G +Y+++++ WI
Sbjct: 383 SKVLRKIEELRTKVKTLSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKR 442
Query: 313 TCPKTGQTLAHTNLVTNTALKNLIALWCRE 342
T P T L+ L N LK I W E
Sbjct: 443 TSPMTNLVLSSVILTPNRTLKMAIDRWLSE 472
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 70/293 (23%), Positives = 139/293 (47%)
Query: 318 GQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKV-NGVVTNKAAL----EATKMT 372
G LA L T + + +++A R + S + NG+V + ++ EA ++
Sbjct: 86 GPDLAEGKLKTQSEVDSVMARLDRHVKDAEVLIKSGLLIDNGIVVSGFSISSKKEAVRLE 145
Query: 373 ASFLINKLATS--QSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASR 430
A L+ +L +S +A D++ EL L + D + C+A+ G + +L R L D+ S
Sbjct: 146 ARNLVIRLQIGGVESKNSAIDSLIEL--LQEDDKNVMICVAQ-GVVPVLVRLL--DSCSL 200
Query: 431 LPNLQVNAVTTILNLSILEANKTRIMETEGA--LNGVIEVLRSGATWEAKGNAAATIFSL 488
+ ++ V I +S++E++K ++ EG LN ++ VL SG+ + AK A + +L
Sbjct: 201 V--MKEKTVAVISRISMVESSK-HVLIAEGLSLLNHLLRVLESGSGF-AKEKACVALQAL 256
Query: 489 SGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERG---- 544
S + + +G + + L+++ +GG S+ A + NLA ET VE
Sbjct: 257 SLSKENARAIGCRGGI-SSLLEICQGGSPGSQAFAAGVLRNLALFGETKENFVEENAIFV 315
Query: 545 IVEIVAEAMDVLPEESVTILE-----------AVVKRGGLTAIVAAYNTIKKL 586
++ +V+ + E +V L +VV+ GG+ + + ++++ +
Sbjct: 316 LISMVSSGTSLAQENAVGCLANLTSGDEDLMISVVREGGIQCLKSFWDSVSSV 368
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 253 ASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN 312
+ V + LR K + +P +F CPI+ ELM++P++ + G +Y+++++ WI
Sbjct: 384 SKVLRKIEELRTKVKTLSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKR 443
Query: 313 TCPKTGQTLAHTNLVTNTALKNLIALWCRE 342
T P T L+ L N LK I W E
Sbjct: 444 TSPMTNLVLSSVILTPNRTLKMAIDRWLSE 473
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 253 ASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN 312
+ V + LR K + + +P +F CPI+ ELM++PV+ + G +Y+++++ WI
Sbjct: 384 SKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKR 443
Query: 313 TCPKTGQTLAHTNLVTNTALKNLIALW 339
T P T L L N LK I W
Sbjct: 444 TSPMTNLVLPSAVLTPNRTLKMAINRW 470
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 150 (57.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 255 VQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTC 314
++ ++SRL+ +++ +A P + CPI E+M +P + A G TY+R++I WI+ +
Sbjct: 692 LESANSRLKTEQA--NARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVS 749
Query: 315 PKTGQTLAHTNLVTNTALKNLIALWCREQRI 345
P T L H++L N L++ I W R+
Sbjct: 750 PVTKHRLKHSDLTPNHTLRSAIREWRSRSRL 780
Score = 39 (18.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 180 VLTTLDQIKKEIVPDHSILKQMFESL 205
V ++Q++KE+ S+ KQ E L
Sbjct: 294 VRAEVEQLRKEVQTTLSMYKQACEEL 319
Score = 39 (18.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 44 MKPLQFLLQRSCLSIIRKVKLLSLFFEE 71
+KP LL R+ +S I V L L +E
Sbjct: 548 LKPGNILLDRNFVSKIGDVGLAKLMSDE 575
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 136 (52.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 254 SVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNT 313
+++K +S + + S S P F CPIS ++M+NP V A G TY+ W+ G
Sbjct: 276 ALEKGESSIPLQWSVS-IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEK 334
Query: 314 CPKTGQTLAHTNLVTNTALKNLIALWCRE 342
P T L + NL+ N L++ I W ++
Sbjct: 335 SPMTNLRLENRNLIPNLVLRSAIKDWLQQ 363
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 79/382 (20%), Positives = 164/382 (42%)
Query: 265 KKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTG---QTL 321
++ + P +F CPIS +M +PVVV++GQT++R + + + N PK ++L
Sbjct: 25 RQQQQEQQPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDL--NFIPKLNDDEESL 82
Query: 322 AH-TNLVTNTALKNLIALWCREQRI----PFDYAASSEKVNGVVTNKAALEATKMTASFL 376
+N++ N +K+ I WC + P DY+ + E++ +E +++ L
Sbjct: 83 PDFSNIIPNLNMKSTIDTWCDTVGVSRPQPPDYS-TVERILRQQMPPPDVEI-RVSEQEL 140
Query: 377 INKLATSQSM--EAANDAVYELRSL--SKTDSDSRACIAEAGAIALLARHLGPDTASRLP 432
+ +A M A+ + R S T SD +A + L P S P
Sbjct: 141 LRAVAHRAPMIIHHADSELMGRRDFNNSTTSSDESVIVAHS-PFTPLPLTTRPACFSPSP 199
Query: 433 NLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVH 492
+ + + T+ + + +N T E + + L+S ++ + + ++ +
Sbjct: 200 SSSSSEIETLTHHTFF-SNSTSTATEEDEV--IYNKLKSSEIFDQE-QGLIMMRKMTRTN 255
Query: 493 AHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEA 552
+ R++ L +++ + + +AL +++NL+ D++ +V G V I+ +
Sbjct: 256 DEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGFVPILIDV 315
Query: 553 MDVLPEESV-----TILEAVVKRGGLTAIVAAYNTIKKLCILLREG-SDTSRESAAATL- 605
+ E+ TI ++ I ++ L LR SD +R +A L
Sbjct: 316 LKSGSREAQEHAAGTIFSLSLEDDNKMPI-GVLGALQPLLHALRAAESDRTRHDSALALY 374
Query: 606 -VTICRKGGSEMVADIAAVPGI 626
+T+ + S++V + AVP +
Sbjct: 375 HLTLNQTNRSKLVR-LGAVPAL 395
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P+ + CPI E+M++P++ A G TY+ ++I W+ +GH+T P T + NL+ N AL
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 334 NLIALW 339
I W
Sbjct: 796 LAIQDW 801
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 139 (54.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/86 (34%), Positives = 41/86 (47%)
Query: 254 SVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNT 313
+++K + R S P F CP+ ++M P V A G TYDR +I W++ HNT
Sbjct: 747 NLKKVAEKARNSFSGVSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE-HNT 805
Query: 314 CPKTGQTLAHTNLVTNTALKNLIALW 339
P T L NL+ N L I W
Sbjct: 806 SPMTDSPLHSKNLLPNYTLYTAIMEW 831
>UNIPROTKB|Q6K762 [details] [associations]
symbol:PUB73 "U-box domain-containing protein 73"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 UniPathway:UPA00143 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208 EMBL:CM000139
GO:GO:0000151 EMBL:AP004864 EMBL:AK106789 RefSeq:NP_001046869.1
UniGene:Os.54797 ProteinModelPortal:Q6K762 PRIDE:Q6K762
EnsemblPlants:LOC_Os02g28870.1 GeneID:4329384
KEGG:dosa:Os02t0490000-01 KEGG:osa:4329384 Gramene:Q6K762
eggNOG:NOG240446 OMA:HLLRDMI ProtClustDB:CLSN2692738 Uniprot:Q6K762
Length = 586
Score = 132 (51.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 64/263 (24%), Positives = 120/263 (45%)
Query: 281 ISLELMRNPVVVATGQTYDR--QSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIAL 338
+ E+MR+PV++ +G + D+ Q+ NT T +L ++ V N L+++I+
Sbjct: 191 LQAEVMRDPVILPSGYSVDQTYQNNQKRQNPWTNTSTFTDHSLPYSLSVPNHLLRDMISA 250
Query: 339 WCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRS 398
WC + D + S+ T LE ++ I KL + S + +A+ ++
Sbjct: 251 WCLDHS---DLSPSTTSD----TPSTPLEPSEEEQIQRILKLFSGNSA-SQREALKLIQL 302
Query: 399 LSKTDSDSRACIAE-AGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIME 457
L+KT + C+A+ A I +L +S +L+ +T ILNL++ N+ I+
Sbjct: 303 LTKTTKGVQPCLAKYADIIPVLINLRRKYKSSWTQDLEEERLTIILNLTMHRQNR-EILA 361
Query: 458 TEGALNGVIE-VLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKG-- 514
+ L G I+ +++ + ++ A + S+ V + RK + G M +++G
Sbjct: 362 GQNELAGAIKKIVKKAGNRGKRTSSLAKVASIVAVLSEFDMF-RKRMLDAGGMKMLRGML 420
Query: 515 --GPTSSKRDALVAILNLAGDRE 535
T +A AIL L D E
Sbjct: 421 KIKDTEVITEAATAILALYADGE 443
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 133 (51.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 53/221 (23%), Positives = 99/221 (44%)
Query: 277 FRCPISLELMRNPVVVATGQTYDRQSISLWI----ESGHN-TCPKTGQTLAHTNLVTNTA 331
F CP++ E+M +PV + G+T++R++I W +SG +CP T Q L T++ + A
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 332 LKNLIALW-CREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAAN 390
L+N I W R D A S + T+ L+A M + + +++ +
Sbjct: 87 LRNTIEEWRSRNDAAKLDIARQSLFLGNAETD--ILQAL-MHVRQICRTIRSNRHGVRNS 143
Query: 391 DAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEA 450
++ + + K+ S A+ L + D S+ + + V T++ E
Sbjct: 144 QLIHMIIDMLKSTSHR----VRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEP 199
Query: 451 NKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGV 491
+K R E A++ + E+ +S A E G+ + L G+
Sbjct: 200 SKGR----EAAVSLLFELSKSEALCEKIGSIHGALILLVGL 236
>UNIPROTKB|E1C8F9 [details] [associations]
symbol:E1C8F9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR000225 InterPro:IPR002553 InterPro:IPR016024
Pfam:PF00514 Pfam:PF01602 PROSITE:PS50176 SMART:SM00185
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00680000099702
OMA:LTNMAMQ InterPro:IPR026840 Pfam:PF14381 EMBL:AADN02000591
EMBL:AADN02000592 IPI:IPI00589277 Ensembl:ENSGALT00000012763
Uniprot:E1C8F9
Length = 876
Score = 133 (51.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 47/201 (23%), Positives = 95/201 (47%)
Query: 351 ASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACI 410
A+S+ ++ + N A+ A + + +L +S E AV L +L+ + + +
Sbjct: 335 AASQAISAMCENLASKRAFGLQGIPQLVQLLSSDDEEVKEAAVIALANLTTASPSNASAV 394
Query: 411 AEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLR 470
AEA I L + L + + NA T + N+++ E + I ++ G ++ + E LR
Sbjct: 395 AEAEGIEPLVKSLNAERHGAV----ANAATVLTNMAMQEPLRLSI-QSHGVMSVLTEPLR 449
Query: 471 SGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNL 530
S ++ + + AA T+ + G A+ ++ R + L++L+ +R+A A++
Sbjct: 450 SSSS-QVQSRAALTVAAF-GCDANARSELRNAGGLGPLVELLHSKDKEVRRNACWAVMVC 507
Query: 531 AGDRETVGRLVERGIVEIVAE 551
A D T L G ++I+ E
Sbjct: 508 ASDELTAVELCRLGALDILEE 528
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 166 GALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGL 207
G + + D K L+ L + +VP+ ++ F +L L
Sbjct: 92 GIMASNHDVKKLLRELDVTSSLLSHLVPEEDVIIHEFATLCL 133
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 128 (50.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 272 NVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTA 331
N P F CPI+ ++M NP V + G TY++++I W++ H + P T +L+ N +
Sbjct: 724 NAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHS 782
Query: 332 LKNLIALWCREQRI 345
L + I W R Q I
Sbjct: 783 LLSAIKEW-RSQLI 795
Score = 46 (21.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 13/62 (20%), Positives = 30/62 (48%)
Query: 134 LLDIMPLQELRLSQDVEDVVVLI-KKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIV 192
LL + P +S +D+ + KK ++T+ L+ S+D + +V + ++ + +
Sbjct: 40 LLHVQPRDSNSVSTTRKDLTTSVYKKDVDRKTREMLLPSRDMFVHREVQLDIMVLESDDI 99
Query: 193 PD 194
D
Sbjct: 100 AD 101
Score = 45 (20.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 11 RKR-RPSAGAFISPTLSDLKLVESL 34
RKR RP G I P L LK V S+
Sbjct: 685 RKRDRPDLGKEILPVLERLKEVASI 709
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
Identities = 62/260 (23%), Positives = 125/260 (48%)
Query: 383 SQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIA-LLARHLGPDTASRLPNLQVNAVTT 441
S + E+ +A EL +LS+ R +AE I+ LL+ D + +V A++
Sbjct: 11 SGNRESQIEAAIELTNLSRKQ---RQKLAEREIISPLLSMLQSQDCITT----EV-ALSA 62
Query: 442 ILNLSI-LEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGR 500
+L+L+ E NK RI+++ GA+ ++E+L+S A A + LS + ++ +
Sbjct: 63 LLSLAFGSERNKVRIVKS-GAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMA- 120
Query: 501 KTRVVKGLMDLVKGGPTS--SKRDALVAILNLAGDRETVGRLVERG----IVEIV--AEA 552
TR+V+ L+ L+ + +K D + + NL+ + V ++ G +++++ +
Sbjct: 121 STRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCDK 180
Query: 553 MDVLPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTIC--- 609
L +++V +LE ++ ++ + I L + EGS +E A L+ IC
Sbjct: 181 SSELADKAVALLENIISHSP-ESVSSIGGAIGVLVEAIEEGSAQCKEHAVGILLGICNND 239
Query: 610 RKGGSEMVADIAAVPGIERV 629
R+ M+ +PG+ +V
Sbjct: 240 RETNRGMILREGVMPGLLQV 259
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 107 (42.7 bits), Expect = 0.00055, P = 0.00055
Identities = 32/89 (35%), Positives = 45/89 (50%)
Query: 263 RRKKSASDANVPADFRC-PISLELMRNPVVVATGQTYDRQSISLWIES-GHNTCPKTGQT 320
+RKK ++P D+ C IS ELMR P + +G TYDR+ I ++ GH P T
Sbjct: 75 KRKKR----DIP-DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVTRSP 128
Query: 321 LAHTNLVTNTALKNLIALWCREQRIPFDY 349
L L+ N A+K +I + E DY
Sbjct: 129 LTQEQLIPNLAMKEVIDAFISENGWVEDY 157
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 109 (43.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 32/92 (34%), Positives = 46/92 (50%)
Query: 260 SRLRRKKSASDANVPADFRC-PISLELMRNPVVVATGQTYDRQSISLWIES-GHNTCPKT 317
S++ K+ D +P D+ C IS ELMR P + +G TYDR+ I ++ GH P T
Sbjct: 164 SQVDEKRKKRD--IP-DYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFD-PVT 219
Query: 318 GQTLAHTNLVTNTALKNLIALWCREQRIPFDY 349
L L+ N A+K +I + E DY
Sbjct: 220 RSPLTQDQLIPNLAMKEVIDAFISENGWVEDY 251
Score = 46 (21.3 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 21/107 (19%), Positives = 45/107 (42%)
Query: 92 YIVLQRMKTLIEDC-----YNGSKM---WLLMQIETAANNFHELTIDLSTLLDIMPLQEL 143
Y+ +Q+ + DC +G + + L Q + N+ E +L ++ Q L
Sbjct: 17 YLKMQQHDKALADCKRALELDGQSVKAHFFLGQCQMEMENYDEAIANLQRAYNLAKEQRL 76
Query: 144 RLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKE 190
D+ + + KK+ + ++ ++++L LT L +KE
Sbjct: 77 NFGDDIPSALRIAKKKRWNSIEEKRIN-QENELH-SYLTRLIMAEKE 121
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 683 637 0.00092 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 619 (66 KB)
Total size of DFA: 289 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.70u 0.13s 50.83t Elapsed: 00:00:03
Total cpu time: 50.72u 0.13s 50.85t Elapsed: 00:00:03
Start: Tue May 21 03:51:39 2013 End: Tue May 21 03:51:42 2013