BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048793
(683 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/678 (59%), Positives = 512/678 (75%), Gaps = 19/678 (2%)
Query: 9 PPRKRRP-SAGAFISPTLS-DLKLVESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLS 66
P RKRRP G+F SP LS D KL SL + S E+SSM+PL F+L+R+ LS+IRKVK+L+
Sbjct: 10 PARKRRPLVVGSFESPKLSSDTKLTRSLFLASHEISSMQPLPFILRRNSLSLIRKVKILA 69
Query: 67 LFFEELLA--NQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNF 124
F+ELL +Q+ +S LCFEEM IV+QR+K+LI+DC SK+WLL+QI+ A NF
Sbjct: 70 SVFDELLLPRSQLVVYSQSAHLCFEEMQIVMQRIKSLIDDCSRVSKLWLLLQIDIVAFNF 129
Query: 125 HELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTL 184
HEL DLST+LDI+PL + LS D +D++ L+ KQCS + VD++D LR +V T+
Sbjct: 130 HELVTDLSTVLDILPLHDFDLSDDAQDLISLLTKQCSDSVQ--FVDARDVALRRKVTDTI 187
Query: 185 DQIKKEIVPDHSILKQMFESLGLRNSSACKEEIESLEEEIQNQTDQKSKHFAAALIGLVR 244
IK +I PDHS L ++F LGL +S++ +EI+ LE+EIQ+Q D +SK AA+LIGLVR
Sbjct: 188 AGIKHQISPDHSTLIKIFNDLGLSDSASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLVR 247
Query: 245 YTKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSIS 304
Y+KCVL+G S D RR +S SDAN+PADFRCPI+LELMR+PVVVATGQTYDR+SI
Sbjct: 248 YSKCVLYGPSTPAPD--FRRHQSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESID 305
Query: 305 LWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKA 364
LWI+SGHNTCPKTGQ L HT+LV N ALKNLI LWCR+Q+IPF+ K
Sbjct: 306 LWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKIPFELYGDGG--GEPAPCKE 363
Query: 365 ALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLG 424
A+E TKM SFLI KL+ + S N V+ELR+L+K+D+ +RACIAEAGAI L R+L
Sbjct: 364 AVEFTKMMVSFLIEKLSVADS----NGVVFELRALAKSDTVARACIAEAGAIPKLVRYL- 418
Query: 425 PDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAAT 484
A+ P+LQ+NAVTTILNLSILE NKTRIMET+GALNGVIEVLRSGATWEAK NAAAT
Sbjct: 419 ---ATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVLRSGATWEAKANAAAT 475
Query: 485 IFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERG 544
+FSL+GV A+R+ LGRK RVV GL+DL K GPTSSKRDALVAILNL +RE VGR VE G
Sbjct: 476 LFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENVGRFVEAG 535
Query: 545 IVEIVAEAMDVLPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAAT 604
++ +A LPEE+V ++EAVV+RGGL A+ AA++ I+ L ++REG+DT+RESAAAT
Sbjct: 536 VMGAAGDAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAAT 595
Query: 605 LVTICRKGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRILRRWAAGLDARSS 664
LVT+CRKGGSE+VA++AA+PGIERVIWE++ +GTAR RKAA+L+R LRRWAAG D ++
Sbjct: 596 LVTMCRKGGSELVAEMAAIPGIERVIWEMIGAGTARGGRKAASLMRYLRRWAAG-DTHNT 654
Query: 665 STTTVTTTAMTNSRIVLP 682
+ T + T SRI P
Sbjct: 655 AAETQSIVVPTPSRIFSP 672
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 247/675 (36%), Positives = 374/675 (55%), Gaps = 46/675 (6%)
Query: 19 AFISPT-LSDLKLVESLLILSQEV-SSMKPLQFLLQR-SCLSIIRKVKLLSLFFEELLAN 75
AF++P LS + LV++L +S EV S ++F QR + S+IRK+++ + FE L+ +
Sbjct: 20 AFLAPVDLSGVALVQTLASISSEVVSCFTSVRFSFQRKNARSLIRKIEIFVVLFEFLVDS 79
Query: 76 Q---------------VSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETA 120
S +LC +E+Y++L R K L++ C SK+WLL+Q +
Sbjct: 80 NWGSTTTRTRARRRSKSSVSESTALLCLKELYLLLYRSKILVDYCAQSSKLWLLLQNPSI 139
Query: 121 ANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQV 180
+ FH+L ++STLLD++P+ +L LS D+ + + L+++Q R +D D+ LR
Sbjct: 140 SGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELLQRQ--SRKARLYIDKNDESLRESF 197
Query: 181 LTTLDQIKKEIVPDHSILKQMF-ESLGLRNSSACKEEIESLEEEIQNQTD--QKSKHFAA 237
+ LD + +P L+ F E LG+R+S +C+ EIE LEE+I N + +
Sbjct: 198 YSFLDGFENGKIPSSVDLRMFFVEKLGIRDSKSCRSEIEFLEEQIVNHDGDLEPTGSVIN 257
Query: 238 ALIGLVRYTKCVLFGAS-------VQKSDSRLRRKKSASDAN-----VPADFRCPISLEL 285
+ + RY + +LFG ++ + + R+ A + VP DF CPISL+L
Sbjct: 258 GFVAITRYCRFLLFGFEEDGMEWWIENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDL 317
Query: 286 MRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRI 345
M +PV+++TGQTYDR SI+ WIE GH TCPKTGQ L + +V N ALKNLI WC I
Sbjct: 318 MTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGI 377
Query: 346 PFDYA---ASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKT 402
++ + +E + KAA+EA K T S LI LA S A A E+R L+KT
Sbjct: 378 SYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADG-SQAAQTVAAREIRLLAKT 436
Query: 403 DSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGAL 462
++RA IAEAGAI L R L + A Q N+VT +LNLSI E NK+RIME L
Sbjct: 437 GKENRAYIAEAGAIPHLCRLLTSENAI----AQENSVTAMLNLSIYEKNKSRIMEEGDCL 492
Query: 463 NGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRD 522
++ VL SG T EA+ NAAAT+FSLS VH ++K + + V+ L L++ G K+D
Sbjct: 493 ESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKD 552
Query: 523 ALVAILNLAGDRETVGRLVERGIVEIVAEAM---DVLPEESVTILEAVVKRGGLTAIVAA 579
A+ A+ NL+ + R++E G V + A+ V E + + V + G AI
Sbjct: 553 AVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKE 612
Query: 580 YNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGTA 639
+ + L ++R G+ +E+A A L+ +CR GG+ + + P I ++ L+ +GT
Sbjct: 613 DSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTK 672
Query: 640 RARRKAAALLRILRR 654
RARRKAA+L R+ +R
Sbjct: 673 RARRKAASLARVFQR 687
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 235/663 (35%), Positives = 374/663 (56%), Gaps = 37/663 (5%)
Query: 18 GAFISPT-LSDLKLVESLLILSQE-VSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLAN 75
GAF +PT L+ L+ ++ L+ V+ +P +R+ ++ R++ LLS E +L +
Sbjct: 29 GAFFAPTGLAGATLLRAVASLAASLVAGARPPS--QRRNVDALARRLALLSAILESILLD 86
Query: 76 QVSFFSPPTV--LCFEEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLST 133
+ + LCF E+Y+VL R + L+ + + W L++ A +F +L +L+
Sbjct: 87 TAAAGAFSDAANLCFRELYVVLFRAELLVSYVASAGRAWALLRSPHLAASFRDLDAELAV 146
Query: 134 LLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVP 193
+LD++P LRLS D ++ L++ C R D + LR +++ L Q P
Sbjct: 147 VLDVLPAASLRLSHDATGLLDLLRAHCRCRAPAQYHDPDEAALRERLMDALRQFDLGQPP 206
Query: 194 DHSILKQMFESLGLRNSSACKEEIESLEEEIQNQTDQKSKHFAAALIGLVRYTKCVLFGA 253
DH L+ + +G+ +++C+ EI+ LEE+I +Q + +++ L+RY +F
Sbjct: 207 DHPSLQSLLADMGISTAASCRAEIDYLEEQILSQEEDTDLPLVGSVLALLRYCLFAVFDP 266
Query: 254 SVQKS---------DSRLRRKKSASDAN--VPADFRCPISLELMRNPVVVATGQTYDRQS 302
S K+ RL D + VP +F CPISL+LMR+PVV +TGQTYDR S
Sbjct: 267 SNAKALRDWPLSGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPS 326
Query: 303 ISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVV-- 360
I WIE GH+TCP +GQTLA LV N AL++LI+ WC + +D S+E + V
Sbjct: 327 IIQWIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCGVYGLQYDSPESNEGMAECVAA 386
Query: 361 --TNKAALEATKMTASFLINKLAT-SQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIA 417
+++AA+EA K TA L+ L S++++A A E+R L+KT +RA IA+ GAI
Sbjct: 387 SCSSRAAMEANKATARILVRMLEDGSENVKAV--AAKEIRLLAKTGKQNRAFIADLGAIP 444
Query: 418 LLARHLGPDTASRLPN---LQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGAT 474
LL R L L N Q NAVT +LNLSI E NK RIME EG L ++ VL++G T
Sbjct: 445 LLCRLL-------LSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWT 497
Query: 475 WEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDR 534
EAK NAAAT+FSLS VH +K + + V+ L ++ G + K+DA++A+ NL+
Sbjct: 498 TEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHP 557
Query: 535 ETVGRLVERGIVEIVAEAM--DVLPEESVTILEAVVKRGGLTAIVAAYNT-IKKLCILLR 591
E+ R++E V + +++ D + EE+ L ++K+ + +V + T I L L+R
Sbjct: 558 ESSARMLESCAVVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMR 617
Query: 592 EGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRI 651
G+ +E+A + L ICR+GGS +V +A +PG+ VI + +GT RA++KA+ ++++
Sbjct: 618 RGTPKGKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKM 677
Query: 652 LRR 654
+R
Sbjct: 678 CQR 680
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 343/658 (52%), Gaps = 53/658 (8%)
Query: 30 LVESLLILSQEVSSMKPLQFLL-QRSCLSIIRKVKLLSLFFEELLANQVSFFSPP----T 84
LV+SLL L+ E+ S KP F +RS +R V+ L +FFEEL Q+ S P
Sbjct: 29 LVDSLLQLAGEILSFKPKHFSTNKRSVKETLRHVQTLVIFFEELRI-QIRVGSIPAGRSV 87
Query: 85 VLCFEEMYIVLQRMKTLIEDC-YNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQEL 143
+L E++++ Q++K L++DC +G+K+++LM + +F +LT +ST LD P++ +
Sbjct: 88 ILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSAHFRDLTRSISTSLDTFPVRSV 147
Query: 144 RLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFE 203
L +V +++ L+ +Q R A D D + V + + I P+ + ++ +
Sbjct: 148 DLPGEVNELIYLVMRQT--RKSEARPDRDDKRAIDSVYWFFNLFENRINPNSDEILRVLD 205
Query: 204 SLGLRNSSACKEEIESLEEEIQNQTDQKSK---HFAAALIGLVRYTKCVLF-GASVQKSD 259
+G+R C +EI+ L EEI +KS + L+G + Y +CV+ G V +
Sbjct: 206 HIGVRKWRDCVKEIDFLREEIS--VGKKSNIEIELLSNLMGFICYCRCVILRGIDVDDEE 263
Query: 260 SRLRRKK--SASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKT 317
NV D RCPISLE+M +PVV+ +G TYDR SI+ W SG+ TCPKT
Sbjct: 264 KDKEEDDLMMVRSLNVD-DLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKT 322
Query: 318 GQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLI 377
G+TL T LV N ++K +I + ++ + +K V + AA EA K+TA FL
Sbjct: 323 GKTLVSTVLVDNFSVKQVIQSYSKQNGVVM--GQKGKKKVDVAESLAAEEAGKLTAEFLA 380
Query: 378 NKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVN 437
+L E A+ E+R L+KT + R+C+ EAG + L + L D P +Q N
Sbjct: 381 GELIKGDEEEMVK-ALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDD----PRIQEN 435
Query: 438 AVTTILNLSILEANKTRIM-ETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRK 496
A+ I+NLS A KTRI+ E G L ++EVL GA E++ AAA +F LS + + +
Sbjct: 436 AMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSR 495
Query: 497 TLGRKTRVVKGLMDLVKGGPT--SSKRDALVAILNLAGDR-ETVGRLVERGIVEIV---- 549
+G + + GL+ +VK S+KR+AL+AI +L ++ + R++ GIV ++
Sbjct: 496 LIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLV 555
Query: 550 --AEAMDVLPEESVTILE----------AVVKRGGLTAIVAAYNTIKKLCILLREGSDTS 597
E D + +S+ IL +V++RGGL V + E S +
Sbjct: 556 KSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLAVKILGS--------SEVSPAT 607
Query: 598 RESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRILRRW 655
++ A L+ +C GGS++V +A P I ++ +G +KA+AL++++ +
Sbjct: 608 KQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNGELGGGKKASALIKMIHEF 665
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 212/635 (33%), Positives = 333/635 (52%), Gaps = 36/635 (5%)
Query: 29 KLVESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCF 88
+LV+S+ +E+S + + + ++R++ LLS FFEEL+ V + F
Sbjct: 15 RLVDSV----KEISGFSSSRGFIGKIQGDLVRRITLLSPFFEELIDVNVEL-KKDQITGF 69
Query: 89 EEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQD 148
E M I L L GSK++ L ++ F ++T+++ L +P +++ +S++
Sbjct: 70 EAMRIALDSSLELFRSVNGGSKLFQLFDRDSLVEKFRDMTVEIEAALSQIPYEKIEVSEE 129
Query: 149 VEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLR 208
V + V L+ Q KR K +S LQ+ L + + PD ILK++ + L L
Sbjct: 130 VREQVQLLHFQF-KRAKERWEESD-----LQLSHDLAMAENVMDPDPIILKRLSQELQLT 183
Query: 209 NSSACKEEIESLEEEI---QNQTDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRK 265
K+E ++ E D + ++ L LV + + R
Sbjct: 184 TIDELKKESHAIHEYFLSYDGDPDDCFERMSSLLKNLVDFVTMESSDPDPSTGSRIVSRH 243
Query: 266 KSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTN 325
+S +P FRCPISLELM++PV+V+TGQTY+R SI W+++GH TCPK+ +TL H
Sbjct: 244 RSPV---IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAG 300
Query: 326 LVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQS 385
L N LK+LIALWC I S + + + ++ + + L+ KLA +
Sbjct: 301 LTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSS-DCDRTFVLSLLEKLANG-T 358
Query: 386 MEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHL-GPDTASRLPNLQVNAVTTILN 444
E A ELR L+K + D+R CIAEAGAI LL L PD P Q ++VT +LN
Sbjct: 359 TEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPD-----PRTQEHSVTALLN 413
Query: 445 LSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRV 504
LSI E NK I++ GA+ ++EVL++G + EA+ NAAAT+FSLS V K
Sbjct: 414 LSINEGNKGAIVDA-GAITDIVEVLKNG-SMEARENAAATLFSLS-VIDENKVAIGAAGA 470
Query: 505 VKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVE----IVAEAMDVLPEES 560
++ L+ L++ G K+DA AI NL + R V+ GIV+ ++ +A + +E+
Sbjct: 471 IQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEA 530
Query: 561 VTILEAV-VKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVAD 619
+ IL + + G TAI A +I L ++R GS +RE+AAA L +C G E + +
Sbjct: 531 LAILAILSTNQEGKTAIAEA-ESIPVLVEIIRTGSPRNRENAAAILWYLC-IGNIERL-N 587
Query: 620 IAAVPGIERVIWELMESGTARARRKAAALLRILRR 654
+A G + + EL E+GT RA+RKAA+LL ++++
Sbjct: 588 VAREVGADVALKELTENGTDRAKRKAASLLELIQQ 622
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 202/639 (31%), Positives = 330/639 (51%), Gaps = 31/639 (4%)
Query: 32 ESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEM 91
+SL+ + E++++ + +++ C ++ R++KLL FEE+ + S T+ +
Sbjct: 10 QSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESN-EPISEDTLKTLMNL 68
Query: 92 YIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVED 151
+ K ++ C GSK++L+M+ E + E+++ L L +P +EL +S +V +
Sbjct: 69 KEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVRE 128
Query: 152 VVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSS 211
V L+ Q +R KG VD DD+L + L +L ++ +L+++ + L L
Sbjct: 129 QVELVLSQF-RRAKGR-VDVSDDEL-YEDLQSLCNKSSDVDAYQPVLERVAKKLHLMEIP 185
Query: 212 ACKEEIESLEEEIQN---QTDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKSA 268
+E +L E + + + + A L + + + QK R
Sbjct: 186 DLAQESVALHEMVASSGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQT 245
Query: 269 SDAN------VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLA 322
S A +P DFRCPISLE+MR+PV+V++GQTY+R I WIE GH+TCPKT Q L
Sbjct: 246 STAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALT 305
Query: 323 HTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLAT 382
T L N L++LIA WC I SS + V + + EA K+ L+ +LA
Sbjct: 306 STTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIED--LMWRLAY 363
Query: 383 SQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLG-PDTASRLPNLQVNAVTT 441
E A E+R L+K ++D+R IAEAGAI LL L PD+ +Q ++VT
Sbjct: 364 GNP-EDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDS-----RIQEHSVTA 417
Query: 442 ILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRK 501
+LNLSI E NK I+ + GA+ G+++VL+ G + EA+ NAAAT+FSLS + ++ T+G
Sbjct: 418 LLNLSICENNKGAIV-SAGAIPGIVQVLKKG-SMEARENAAATLFSLSVIDENKVTIG-A 474
Query: 502 TRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIV----EIVAEAMDVLP 557
+ L+ L+ G K+DA A+ NL + G+ + G++ ++ E +
Sbjct: 475 LGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMV 534
Query: 558 EESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMV 617
+E++ IL + AI+ + + + L +R GS +RE+AAA LV +C +V
Sbjct: 535 DEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLV 594
Query: 618 ADIAAVPGIERVIWELMESGTARARRKAAALLRILRRWA 656
A G+ + +L +GT R +RKAA LL + R A
Sbjct: 595 E--AQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLA 631
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 332/616 (53%), Gaps = 47/616 (7%)
Query: 52 QRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQRMKTLIEDCYNGSKM 111
Q+ C +++R++K+L F +E+ F SP + V K L+E C NGSK+
Sbjct: 75 QKECFNLVRRLKILIPFLDEIRG----FESPSCKHFLNRLRKVFLAAKKLLETCSNGSKI 130
Query: 112 WLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDS 171
++ + ET FH + L+ +L P EL +S D +D + + KQ K + D+
Sbjct: 131 YMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRT--DT 188
Query: 172 KDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKEEIESLEEEIQNQT--D 229
+D +L + ++ + D +I++++ + L L+ K E +++ IQ++ +
Sbjct: 189 QDIELAVDMMVVFSKTDPRNA-DSAIIERLAKKLELQTIDDLKTETIAIQSLIQDKGGLN 247
Query: 230 QKSKHFAAALIGLVRYTKC-----VLFGASVQKSDSRLRRKKSASDANVPADFRCPISLE 284
++K L+ + + +L+ + K+ ++ ++ +P +F CPI+LE
Sbjct: 248 IETKQHIIELLNKFKKLQGLEATDILYQPVINKAITK------STSLILPHEFLCPITLE 301
Query: 285 LMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQR 344
+M +PV++ATGQTY+++SI W ++GH TCPKT Q L H +L N ALKNLI WC +
Sbjct: 302 IMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKN- 360
Query: 345 IPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDS 404
++ ++V+ N+ K S L+ L++SQ +E +V ++R L++ +
Sbjct: 361 ---NFKIPEKEVSPDSQNE-----QKDEVSLLVEALSSSQ-LEEQRRSVKQMRLLARENP 411
Query: 405 DSRACIAEAGAIALLARHLG-PDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALN 463
++R IA AGAI LL + L PD+ +Q NAVTT+LNLSI E NK +++ EGA+
Sbjct: 412 ENRVLIANAGAIPLLVQLLSYPDSG-----IQENAVTTLLNLSIDEVNK-KLISNEGAIP 465
Query: 464 GVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDA 523
+IE+L +G EA+ N+AA +FSLS + ++ T+G + + L+DL++ G K+DA
Sbjct: 466 NIIEILENG-NREARENSAAALFSLSMLDENKVTIGL-SNGIPPLVDLLQHGTLRGKKDA 523
Query: 524 LVAILNLAGDRETVGRLVERGIVE-----IVAEAMDVLPEESVTILEAVVKRGGLTAIVA 578
L A+ NL+ + GR ++ GIV+ + + + ++ E +L G AI
Sbjct: 524 LTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAI-G 582
Query: 579 AYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGT 638
+ I+ L +R+G+ ++E A + L+ + S ++A A G+ + E+ SGT
Sbjct: 583 QLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILA--ALQFGVYEYLVEITTSGT 640
Query: 639 ARARRKAAALLRILRR 654
RA+RKA AL++++ +
Sbjct: 641 NRAQRKANALIQLISK 656
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 196/631 (31%), Positives = 323/631 (51%), Gaps = 48/631 (7%)
Query: 37 LSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCFEEMYIVLQ 96
++ E++++ + L+R C + R+V+LL+ + L A+ S S P + L
Sbjct: 5 VADEIAALPEPRGPLRRPCADLSRRVRLLAPLLDHLPASSSSSSSTP-------LADALG 57
Query: 97 RMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLI 156
+ L+ +GSK+ M+ + + F + + LD +P + Q+V++ V L+
Sbjct: 58 AARDLLRKTRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALV 117
Query: 157 KKQ---CSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSAC 213
Q S RT D D +L + + L + D ++L ++ L L +
Sbjct: 118 HSQFQRASTRT-----DPPDTQLSMDLAWAL----TDNPSDPALLTRISHKLQLHTMADM 168
Query: 214 KEEIESLEEEIQNQTDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKSASDAN- 272
K E +L + + + L + CV+ +D+ R S +
Sbjct: 169 KNESIALHNMVISTAGEPDGCVDQMSSLLKKLKDCVV--TEDHANDALTTRSASIKHRSP 226
Query: 273 -VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTA 331
+P +FRCPISLELM++PV+V++GQTY+R I W++SGH TCPKT Q L+HT+L N
Sbjct: 227 IIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFV 286
Query: 332 LKNLIALWCREQRI--PFDYAASSEKVNGVVTNKAALEATKMTASF--LINKLATSQSME 387
LK+LI+ WC I P + S +K KAA + A L+N+L S + +
Sbjct: 287 LKSLISQWCEANGIELPKNKQNSRDK-------KAAKSSDYDHAGLVSLMNRL-RSGNQD 338
Query: 388 AANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSI 447
A E+R L+K + ++R CIAEAGAI LL L +S P Q +AVT +LNLSI
Sbjct: 339 EQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLL----SSSDPRTQEHAVTALLNLSI 394
Query: 448 LEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKG 507
E NK I+++ A+ ++EVL++G + E + NAAAT+FSLS V ++ T+G +
Sbjct: 395 HENNKASIVDSH-AIPKIVEVLKTG-SMETRENAAATLFSLSVVDENKVTIG-AAGAIPP 451
Query: 508 LMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIV----EIVAEAMDVLPEESVTI 563
L++L+ G K+DA AI NL + R V+ GIV + + + +E++++
Sbjct: 452 LINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSL 511
Query: 564 LEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAV 623
L + ++A I L +++ GS +RE+AAA L +C + +A AA
Sbjct: 512 LSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAA- 570
Query: 624 PGIERVIWELMESGTARARRKAAALLRILRR 654
G+E + EL E+GT RA+RKA+++L ++ +
Sbjct: 571 -GVEDALKELSETGTDRAKRKASSILELMHQ 600
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 319/666 (47%), Gaps = 86/666 (12%)
Query: 17 AGAFISPTLSDLKLVESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLAN- 75
AG +SP SLL L ++ + + ++ C + R+V LL+ EE+ +
Sbjct: 2 AGGIVSPA--------SLLDLIADIVEIPLNTGMFKKDCADLTRRVCLLTHLLEEIRDST 53
Query: 76 --QVSFFSPPTVLCFEEMYIVLQRMKTLI-------EDCYNGSKMWLLMQIETAANNFHE 126
+ S + ++ + LQ K L+ D +G+ + Q F
Sbjct: 54 PIDSAASSSSENDWWSDLVVGLQAAKRLLSTARFQARDSSDGAAKRISFQ-------FQC 106
Query: 127 LTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQ 186
+T L L +P +S +V + V L + Q + +Q +L+
Sbjct: 107 VTWKLEKALSNLPYDLYDISDEVGEQVELARSQLRRA--------------MQRYGSLNS 152
Query: 187 IKKEIVPDHSILKQMFESLGLRNSSACK--EEIESLEEEIQ-NQTDQKSKHFAAALIGLV 243
K S L + E G N K E++ES+ E + + ++K +
Sbjct: 153 NKF-----SSALSEPMERDGFSNVIKIKAEEKLESVSETLHFGEEEEKQSSPPLRRSSSI 207
Query: 244 RYTKCVLFGASVQKSDSRLRRK----KSASDANVPADFRCPISLELMRNPVVVATGQTYD 299
+ A + D + + K + +P DF CP+SLELM++PV+VATGQTY+
Sbjct: 208 SLAYYLSKDADTDRLDKMVNKNTDESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYE 267
Query: 300 RQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRI--PFDYAASSEKVN 357
R I WI+ G+ TCPKT Q L + L N L++LI+ WC E I P Y +N
Sbjct: 268 RAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGY------IN 321
Query: 358 GVVTNKAALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIA 417
G N + + L+ +L +S+S E +AV E+RSLSK +D+R IAEAGAI
Sbjct: 322 GRTKNSGDMSVIRA----LVQRL-SSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIP 376
Query: 418 LLARHL-GPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWE 476
+L L D A+ Q NA+T +LNLSI E NK IM GA+ +++VLR+G T E
Sbjct: 377 VLVNLLTSEDVAT-----QENAITCVLNLSIYENNKELIM-FAGAVTSIVQVLRAG-TME 429
Query: 477 AKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRET 536
A+ NAAAT+FSLS ++ +G + + L+DL++ G K+DA A+ NL
Sbjct: 430 ARENAAATLFSLSLADENKIIIG-GSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGN 488
Query: 537 VGRLVERGIVEIVAEAMD-----VLPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLR 591
GR V GIV + + + + +E++TIL + + + NT+ L +L+
Sbjct: 489 KGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQ 548
Query: 592 EGSDTSRESAAATLVTICRKGGSEMVAD---IAAVPGIERVIWELMESGTARARRKAAAL 648
+RE+AAA L+++C++ +++ A VP + +L ++GT R +RKA +L
Sbjct: 549 TDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVP-----LMDLSKNGTERGKRKAISL 603
Query: 649 LRILRR 654
L +LR+
Sbjct: 604 LELLRK 609
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 183/681 (26%), Positives = 336/681 (49%), Gaps = 72/681 (10%)
Query: 22 SPTLSDLKLVESLLILSQEVSSMKPLQFLLQRSCL-SIIRKVKLLSLFFEELLANQVS-- 78
S ++S + L++SL+ L+ ++ + K F + +R+++ L + FEE+ +
Sbjct: 21 SESISIVTLLDSLIQLAGDILTFKSKHFSTNKQSFRETLRRIQNLLVVFEEIRIRIRNSR 80
Query: 79 --FFSPPTVLCFEEMYIVLQRMKTLIEDC-YNGSKMWLLMQIETAANNFHELTIDLSTLL 135
F +E+++ Q++K L+EDC +G+++ ++M + +++ LT +ST L
Sbjct: 81 RYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVSDHLRVLTRSISTSL 140
Query: 136 DIMPLQELRLSQDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDH 195
P+ + L+ +V +++ L+ +Q R G ++ D + + L +VPD
Sbjct: 141 SAFPVASVDLTTEVNELIDLVVRQA--RKYGVQPETNDKRAVSSINRILALFVNRVVPDP 198
Query: 196 SILKQMFESLGLRNSSACKEEIESLEEEIQ-NQTDQKSK------HFAAALIGLVRYTKC 248
+ ++ + +G+R C +EI L EEI + D+K K ++L+G + Y +C
Sbjct: 199 DEINRILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYCRC 258
Query: 249 VLFGASVQKSDSRLRRKKS-ASDANV-----PADFRCPISLELMRNPVVVATGQTYDRQS 302
++ G +++ D + D ++ D CPISLE+M +PVV+ TG TYDR S
Sbjct: 259 IILG-RIERDDHHNHHEDGIKKDHDLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRSS 317
Query: 303 ISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTN 362
I+ W SG+ TCP TG+ L T LV N +++ +I C+ I + K + V
Sbjct: 318 ITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVP 377
Query: 363 K--AALEATKMTASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLA 420
+ AA A K+ A FL ++L E AV E+R +KT S +R+C+ +AGA+ L
Sbjct: 378 ESLAAKGAGKLIAKFLTSELINGGE-EMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLL 436
Query: 421 RHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGN 480
+ L +S +Q NA+ ILNLS K++I EG L ++E+L GA E +
Sbjct: 437 KLL----SSVDIRIQENAMAGILNLSKHVTGKSKIA-GEG-LKILVEILNEGAKTETRLY 490
Query: 481 AAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGP--TSSKRDALVAILNLAGDRETVG 538
+A+ +F LS V + + +G + GLM++VKG S+KR AL+A++ L +
Sbjct: 491 SASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHW 550
Query: 539 RLVERGIVEIVAEAM-----------DVL---------PEESVTILEAVVKRGGLTAIVA 578
R++ G V I+ + + D L P+ ++ V++RGGL
Sbjct: 551 RVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTI----GVIRRGGL----- 601
Query: 579 AYNTIKKLCILLREGSDTS----RESAAATLVTICRKGGSEMVADIAAVPGIERVIWELM 634
KL + + S+ S ++ ++ +C GG ++V + + ++ ++
Sbjct: 602 ------KLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVL 655
Query: 635 ESGTARARRKAAALLRILRRW 655
+G +KA+AL+R++ +
Sbjct: 656 SNGEYGGSKKASALIRMIHEF 676
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 222 bits (565), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 328/640 (51%), Gaps = 25/640 (3%)
Query: 29 KLVESLLILSQEVSSMKPLQFLLQRSCLSIIRKVKLLSLFFEELLANQVSFFSPPTVLCF 88
KL ++L+ E++S+ +++ C ++ R++ LL EE+ NQ S S V
Sbjct: 8 KLAQTLIDSINEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQES--SSEVVNAL 65
Query: 89 EEMYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQD 148
+ L K L+ + SK++L+++ + F ++T L L I+P + L +S +
Sbjct: 66 LSVKQSLLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDE 125
Query: 149 VEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLR 208
+++ V L+ Q + D DD+L VL+ + V + +++++ E L L
Sbjct: 126 LKEQVELVLVQLRRSLGKRGGDVYDDELYKDVLSLYS--GRGSVMESDMVRRVAEKLQLM 183
Query: 209 NSSACKEEIESLEEEIQNQT-DQKSKHFAAALIGLVRYTKCV-LFGASVQKSDSRLRR-- 264
+ +E +L + + + D + F + L + V + ++ + RL+
Sbjct: 184 TITDLTQESLALLDMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNLDDAPLRLKSSL 243
Query: 265 -KKSASDANV---PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQT 320
K D ++ P +FRCPISLELM +PV+V++GQTY+R+ I W+E GH TCPKT +T
Sbjct: 244 PKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQET 303
Query: 321 LAHTNLVTNTALKNLIALWCREQRI-PFDYAASSEKVNGVVTNKAALEATKMTASFLINK 379
L + N L++LIA WC I P S+ + ++ +A + L+ K
Sbjct: 304 LTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLK 363
Query: 380 LATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAV 439
L TSQ E A E+R L+K ++ +R IA +GAI LL L SR Q +AV
Sbjct: 364 L-TSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSR---TQEHAV 419
Query: 440 TTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLG 499
T+ILNLSI + NK +I+ + GA+ G++ VL+ G + EA+ NAAAT+FSLS + ++ T+G
Sbjct: 420 TSILNLSICQENKGKIVYSSGAVPGIVHVLQKG-SMEARENAAATLFSLSVIDENKVTIG 478
Query: 500 RKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEI----VAEAMDV 555
+ L+ L+ G K+DA A+ NL + G+ V G+V + + E
Sbjct: 479 -AAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESG 537
Query: 556 LPEESVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSE 615
+ +ES++IL + + V A + + L +R GS ++E++AA LV +C
Sbjct: 538 MVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQH 597
Query: 616 MVADIAAVPGIERVIWELMESGTARARRKAAALLRILRRW 655
++ A GI ++ E+ E+GT R +RKAA LL R+
Sbjct: 598 LIE--AQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRF 635
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 253/467 (54%), Gaps = 53/467 (11%)
Query: 215 EEIESLEEEIQNQTDQKSKH----FAAALIGLVRYTKCVLFGASVQKSDSRLRR------ 264
E++ES+ E + + +D+K + ++ + L F S D RL +
Sbjct: 180 EKLESIPETVHSLSDEKKFESPPPWKSSSVSLA-------FFLSKDGDDERLEKAVTENS 232
Query: 265 --KKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLA 322
+ + + +P DF CPISLELM++P +V+TGQTY+R I WI+ G+ +CPKT Q L
Sbjct: 233 DDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLE 292
Query: 323 HTNLVTNTALKNLIALWCREQRI--PFDYAASSEKVNGVVTNKAA----LEATKMTASFL 376
+ L N L++LI+ WC + I P Y +NG N L L
Sbjct: 293 NFTLTPNYVLRSLISQWCTKHNIEQPGGY------MNGRTKNSDGSFRDLSGDMSAIRAL 346
Query: 377 INKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQV 436
+ KL +SQS+E AV E+RSLSK +D+R IAEAGAI +L + L D + Q
Sbjct: 347 VCKL-SSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTE---TQE 402
Query: 437 NAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRK 496
NAVT ILNLSI E NK IM GA+ ++ VLR+G+ EA+ NAAAT+FSLS ++
Sbjct: 403 NAVTCILNLSIYEHNKELIM-LAGAVTSIVLVLRAGSM-EARENAAATLFSLSLADENKI 460
Query: 497 TLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAM--- 553
+G + + L+DL++ G K+DA A+ NL + GR V GIV+ + + +
Sbjct: 461 IIG-ASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDS 519
Query: 554 --DVLPEESVTILEAVV-KRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICR 610
+ + +E++TIL + + TAI+ A N I L L++ +RE+AAA L+ +C+
Sbjct: 520 SSERMADEALTILSVLASNQVAKTAILRA-NAIPPLIDCLQKDQPRNRENAAAILLCLCK 578
Query: 611 KGGSEMVAD---IAAVPGIERVIWELMESGTARARRKAAALLRILRR 654
+ ++++ A VP + EL GT RA+RKA +LL +LR+
Sbjct: 579 RDTEKLISIGRLGAVVP-----LMELSRDGTERAKRKANSLLELLRK 620
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 285/571 (49%), Gaps = 53/571 (9%)
Query: 108 GSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGA 167
GS++ L+++ ++ F + + L L +P EL +S +V + V L+ Q KR K
Sbjct: 107 GSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQL-KRAK-E 164
Query: 168 LVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKEEIESLEEEIQNQ 227
+D DD+ +L+ D+ + + +IL ++ E L L + +E +L E + +
Sbjct: 165 RIDMPDDEFYNDLLSVYDK-NYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASG 223
Query: 228 TDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKSASDAN-------VPADFRCP 280
Q + L++ K + Q D D+N +P +FRCP
Sbjct: 224 GGQDPGEHIERMSMLLKKIKDFV---QTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCP 280
Query: 281 ISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWC 340
ISLELM++PV+V+TGQTY+R I WI SGH+TCP T Q ++ + L N L++LI+ WC
Sbjct: 281 ISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWC 340
Query: 341 REQRIPFDYAASSEKVNGVVTNKAALEATKMTASF----------LINKLATSQSMEAAN 390
+ NG+ K + + K T + L++KL + + E
Sbjct: 341 --------------ETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDT-EEQR 385
Query: 391 DAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEA 450
A ELR L+K ++++R CIAEAGAI LL +S Q +AVT +LNLSI E
Sbjct: 386 SAAAELRLLAKRNANNRICIAEAGAIPLLLS----LLSSSDLRTQEHAVTALLNLSIHED 441
Query: 451 NKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMD 510
NK I+ + GA+ ++ VL++G + EA+ NAAAT+FSLS + ++ T+G + L+
Sbjct: 442 NKASII-SSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIG-GMGAIPALVV 498
Query: 511 LVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVE----IVAEAMDVLPEESVTILEA 566
L+ G K+DA A+ NL + GR + G+V +V L +E++ IL
Sbjct: 499 LLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSI 558
Query: 567 VVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVP-- 624
+ A + A + L ++ G+ +RE+AAA ++ +C G + +A
Sbjct: 559 LSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLC--SGEHHLVHLARAQEC 616
Query: 625 GIERVIWELMESGTARARRKAAALLRILRRW 655
GI + EL +GT R +RKA LL + R+
Sbjct: 617 GIMVPLRELALNGTDRGKRKAVQLLERMSRF 647
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 285/571 (49%), Gaps = 53/571 (9%)
Query: 108 GSKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQDVEDVVVLIKKQCSKRTKGA 167
GS++ L+++ ++ F + + L L +P EL +S +V + V L+ Q KR K
Sbjct: 107 GSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQL-KRAK-E 164
Query: 168 LVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKEEIESLEEEIQNQ 227
+D DD+ +L+ D+ + + +IL ++ E L L + +E +L E + +
Sbjct: 165 RIDMPDDEFYNDLLSVYDK-NYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASG 223
Query: 228 TDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKSASDAN-------VPADFRCP 280
Q + L++ K + Q D D+N +P +FRCP
Sbjct: 224 GGQDPGEHIERMSMLLKKIKDFV---QTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCP 280
Query: 281 ISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWC 340
ISLELM++PV+V+TGQTY+R I WI SGH+TCP T Q ++ + L N L++LI+ WC
Sbjct: 281 ISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWC 340
Query: 341 REQRIPFDYAASSEKVNGVVTNKAALEATKMTASF----------LINKLATSQSMEAAN 390
+ NG+ K + + K T + L++KL + + E
Sbjct: 341 --------------ETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDT-EEQR 385
Query: 391 DAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEA 450
A ELR L+K ++++R CIAEAGAI LL +S Q +AVT +LNLSI E
Sbjct: 386 SAAAELRLLAKRNANNRICIAEAGAIPLLLS----LLSSSDLRTQEHAVTALLNLSIHED 441
Query: 451 NKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMD 510
NK I+ + GA+ ++ VL++G + EA+ NAAAT+FSLS + ++ T+G + L+
Sbjct: 442 NKASII-SSGAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIG-GMGAIPALVV 498
Query: 511 LVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVE----IVAEAMDVLPEESVTILEA 566
L+ G K+DA A+ NL + GR + G+V +V L +E++ IL
Sbjct: 499 LLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSI 558
Query: 567 VVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVP-- 624
+ A + A + L ++ G+ +RE+AAA ++ +C G + +A
Sbjct: 559 LSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLC--SGEHHLVHLARAQEC 616
Query: 625 GIERVIWELMESGTARARRKAAALLRILRRW 655
GI + EL +GT R +RKA LL + R+
Sbjct: 617 GIMVPLRELALNGTDRGKRKAVQLLERMSRF 647
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 202/396 (51%), Gaps = 33/396 (8%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P +FRCP+S ELMR+PVV+A+GQTYD+ I W+ SG+ TCPKT Q L HT L N ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 334 NLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDAV 393
+I+ WC++ + S N V ++ + + + L+ K+++S +++ A
Sbjct: 135 EMISKWCKKNGLE---TKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSS-NLQDQKSAA 190
Query: 394 YELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPN-----------LQVNAVTTI 442
ELR L++ ++ RA E+ PD +RL N LQ + VTT+
Sbjct: 191 KELRLLTRKGTEFRALFGES-----------PDEITRLVNPLLHGSNPDEKLQEDVVTTL 239
Query: 443 LNLSIL-EANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRK 501
LN+SI ++NK + E + +I+ LR G T + NAAA IF+LS + +++ +G K
Sbjct: 240 LNISIHDDSNKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSALDSNKVLIG-K 297
Query: 502 TRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD--VLPEE 559
+ ++K L+DL++ G + +D AI L E R V G V ++ + + + +E
Sbjct: 298 SGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDE 357
Query: 560 SVTILEAVVKRGGLTAIVAAYNTIKKLCILLREGS-DTSRESAAATLVTICRKGGSEMVA 618
+ IL +V + + L + RE ++E+A L TIC ++
Sbjct: 358 LLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKW-K 416
Query: 619 DIAAVPGIERVIWELMESGTARARRKAAALLRILRR 654
+I I +L GT+RA+RKA +L LR+
Sbjct: 417 EIKEEENAHGTITKLSREGTSRAQRKANGILDRLRK 452
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 193/453 (42%), Gaps = 68/453 (15%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P + RCPISL+LM +PV++A+GQTY+R I W GHNTCPKT Q L H +L N +K
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 334 NLIALWCREQ--RIP--------FDY---------AASSEKVNGVVTNK----------- 363
LIA WC + +IP DY + S+ VN + + K
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEE 392
Query: 364 ---AALEATKMTASFL----------INKLATSQ----------SMEAANDAVYELRSLS 400
+E SF+ IN L Q +E V ++R L
Sbjct: 393 NGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLL 452
Query: 401 KTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEG 460
K D ++R + G + L R LG Q + + NL++ +M T G
Sbjct: 453 KDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSG 512
Query: 461 ALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSK 520
+ ++E + S A E+ G+A A +LS + + +G V + L K T K
Sbjct: 513 VIR-LLEKMISSA--ESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCK 569
Query: 521 RDALVAILNLAGDRETVGRLVERGIVE-----IVAEAMDVLPEESVTI-LEAVVKRGGLT 574
DAL A+ NL+ + L+ I++ + + ++ E+S+ + L + G
Sbjct: 570 LDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKD 629
Query: 575 AIVAAYNTIKKLCILLREGSDTSRESAAATLVTIC--RKGGSEMVADIAAVPGIERVIWE 632
V++ I L +L G T +E A + L+ +C R+ +MV +P + +
Sbjct: 630 EAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISV- 688
Query: 633 LMESGTARARRKAAALLRILRRWAAGLDARSSS 665
+GT R R K+ LL + R D SS+
Sbjct: 689 ---NGTPRGREKSQKLLMLFREERQQRDQPSSN 718
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 216/460 (46%), Gaps = 25/460 (5%)
Query: 209 NSSACKEEIESLEEEIQNQTDQKSKHFAAALIGLVR-YTKCVLFGASVQKSDSRLRRKKS 267
N+ + E++ + EI N + A G+V+ + V ++K +S++ +
Sbjct: 8 NADTLRRELQKVLTEILNDGGGNDRDETEAFSGVVKAIDEAVRILTCLRKVESKIP-ESD 66
Query: 268 ASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLV 327
S VP +F C +S +M PV++A+GQTY+++ I+ W++ TCPKT Q L+H +
Sbjct: 67 ISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWI 125
Query: 328 TNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSME 387
N + +LI WC + +D+ S+++ A L + + A L+ ++++S S+
Sbjct: 126 PNHLISDLITQWCLVNK--YDHQKPSDEL------VAELFTSDIEA--LLQRVSSSSSVA 175
Query: 388 AANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGP-----DTASRLPNLQVNAVTTI 442
+A ELR +K + R AG + R L P + LQ N VT +
Sbjct: 176 DQIEAAKELRHQTKKFPNVRVFFV-AGIHDSITRLLSPLSTLDEAVDSSLELQENIVTAL 234
Query: 443 LNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKT 502
NLSILE+NKT I E + + + L+ G T E + NAAAT+ SLS + +++ +G +
Sbjct: 235 FNLSILESNKTVIAENCLVIPLLTKSLKQG-TDETRRNAAATLSSLSAIDSNKIIIG-NS 292
Query: 503 RVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDVLP--EES 560
VK L+DL++ G + ++A + NL E G++V G++ + + +E
Sbjct: 293 EAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDEL 352
Query: 561 VTILEAVVKRGGLTAIVAAYNTIKKLCILLREGSD--TSRESAAATLVTICRKGGSEMVA 618
+++L + + I L +LR+ S T + R +
Sbjct: 353 LSLLALISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLK 412
Query: 619 DIAAVPGIERVIWELMESGTARARRKAAALLRILRRWAAG 658
+ +L + G+ RA RKA +L+ ++R+ G
Sbjct: 413 VVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIKRFVTG 452
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 197/384 (51%), Gaps = 23/384 (5%)
Query: 272 NVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHT-NLVTNT 330
++P DFRCPISLE+M +PV++ +G T+DR SI WI+SG+ TCP T L+ T L+ N
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNH 63
Query: 331 ALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAAN 390
AL++LI ++A S K + + E + + LI+ L + S A+
Sbjct: 64 ALRSLI----------LNFAHVSLKESS--RPRTQQEHSHSQSQALISTLVSQSSSNASK 111
Query: 391 -DAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILE 449
+++ L L+K DS R + E+GA+ + D+ +++ LQ +++ +LNLS+ +
Sbjct: 112 LESLTRLVRLTKRDSSIRRKVTESGAVRAALDCV--DSCNQV--LQEKSLSLLLNLSLED 167
Query: 450 ANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLM 509
NK ++ +G + ++ VLR G+ + K AA + SL+ V ++ T+G + L+
Sbjct: 168 DNKVGLV-ADGVIRRIVTVLRVGSP-DCKAIAATLLTSLAVVEVNKATIGSYPDAISALV 225
Query: 510 DLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDVLPEESVTILEAVVK 569
L++ G ++++ A+ L + R+V+ G V I+ EA D E +V +L +VK
Sbjct: 226 SLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSGLERAVEVLGLLVK 285
Query: 570 -RGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIER 628
RGG + ++ L +LR G+ + + L +C G + D G+
Sbjct: 286 CRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGE--IVDEVKREGVVE 343
Query: 629 VIWELMESGTARARRKAAALLRIL 652
+ + ++ + + RR A L+ L
Sbjct: 344 ICFGFEDNESEKIRRNATILVHTL 367
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 189/463 (40%), Gaps = 66/463 (14%)
Query: 251 FGASVQKSDS----RLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLW 306
FG + K S + +KS P + RCPISL+LM +PV++A+GQTY+R I W
Sbjct: 249 FGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKW 308
Query: 307 IESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCRE----------QRIPFDY----AAS 352
GHN+CPKT Q L H +L N +K LIA WC + + + +Y +
Sbjct: 309 FSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSD 368
Query: 353 SEKVN-------GVVTNK----AALEATKMTAS---------------FLINKLATSQSM 386
SE N G+ T K LE + S IN L Q +
Sbjct: 369 SESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDI 428
Query: 387 EAAND----------AVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQV 436
A D V +R L K + ++R + G + + L Q
Sbjct: 429 LAIVDKEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQE 488
Query: 437 NAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATW-EAKGNAAATIFSLSGVHAHR 495
+ NL++ +M T +GVI +L + +++G A A +LS + +
Sbjct: 489 TGAMALFNLAVNNNRNKELMLT----SGVIPLLEKMISCSQSQGPATALYLNLSCLEKAK 544
Query: 496 KTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVE----IVAE 551
+G V + L++ T K DAL A+ NL+ + L+ I++ + +
Sbjct: 545 PVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLAST 604
Query: 552 AMDVLPEESVTI-LEAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICR 610
+ E+S+ + L R G ++ I L +L G +E A + LV +C
Sbjct: 605 GNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCT 664
Query: 611 KGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRILR 653
GSE + G+ + + +G+ R R K+ LL + R
Sbjct: 665 --GSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFR 705
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 150/664 (22%), Positives = 278/664 (41%), Gaps = 118/664 (17%)
Query: 91 MYIVLQRMKTLIEDCYNGSKMWLLMQIETAANNFHE----LTIDLSTLLDIMPLQELRLS 146
+++VL+++K ++ C SK++L + ++ F + LT L + DI+ Q+ S
Sbjct: 57 LHVVLEKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIV--QQSIGS 114
Query: 147 QDVEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKK-EIVPDHS---ILKQMF 202
Q +E ++ L + S +D + ++ Q++ L Q E D++ + Q
Sbjct: 115 QLLEILMELENTEFS-------LDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAA 167
Query: 203 ESLGLRNSSACKEE---IESLEEEIQNQTDQKSKHFAAALIGLVR-YTKCVLF------- 251
LG+ +S A E ++ L E + + D++ + A L+ L+R Y+K LF
Sbjct: 168 TRLGITSSRAALTERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSK--LFRSEIWDD 225
Query: 252 ----GAS-------VQKS---------DSRLRR------------KKSASDANVPADFRC 279
G+S +Q S D +L + ++S+ + P + RC
Sbjct: 226 NDSQGSSSLPCSPTIQGSIDDAHGRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRC 285
Query: 280 PISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALW 339
PISL+LM +PV++A+GQTY+R I W GHNTCPKT Q L+H L N +K LI+ W
Sbjct: 286 PISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSW 345
Query: 340 CREQ-----------------RIPFDYAASSEKVNGVVTNKAALEATKMT---------- 372
C + R+ + S++ + L+ K+
Sbjct: 346 CEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKE 405
Query: 373 -----------------ASFLINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGA 415
+ L+ L ++ V ++R L K D ++R + E G
Sbjct: 406 EACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGC 465
Query: 416 IALLARHLGPDTASRLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATW 475
+ L + LG + Q + NL++ +M G + + E+L
Sbjct: 466 VEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEML---CNP 522
Query: 476 EAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRE 535
+ G+ A +LS + + +G V + L K DAL ++ +L+
Sbjct: 523 HSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPP 582
Query: 536 TVGRLVERGIVEIVAEAMDVLPEESVT------ILEAVVKRGGLTAIVAAYNTIKKLCIL 589
+ L+ +V + +++ + E+ T +L V+ G +V+A + + LC +
Sbjct: 583 NIPCLLSADLVNAL-QSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTI 641
Query: 590 LREGSDTSRESAAATLVTICRKGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALL 649
L G +E A + L+ +C SE+ +++ G+ + + +GT R R +A LL
Sbjct: 642 LDTGEPNEQEQAVSLLLILCNH--SEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLL 699
Query: 650 RILR 653
+ R
Sbjct: 700 TLFR 703
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 154/296 (52%), Gaps = 25/296 (8%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHL-GPDTASRLPNL 434
L+ +L +S S++ A ELR L+K + D+R I +GAI LL L D+A+
Sbjct: 546 LVEELKSS-SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSAT----- 599
Query: 435 QVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAH 494
Q NAVT +LNLSI + NK I + GA+ +I VL +G++ EAK N+AAT+FSLS + +
Sbjct: 600 QENAVTALLNLSINDNNKKAIADA-GAIEPLIHVLENGSS-EAKENSAATLFSLSVIEEN 657
Query: 495 RKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMD 554
+ +G ++ + L+DL+ G K+DA A+ NL+ +E +V+ G V + + MD
Sbjct: 658 KIKIG-QSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMD 716
Query: 555 VLPEESVTILEAVVKRGGLTAIVAAYNTIKK------LCILLREGSDTSRESAAATLVTI 608
P + + +AV L I N I + L ++ GS +E+AAA L+ +
Sbjct: 717 --PAAGM-VDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQL 773
Query: 609 CRKGGS--EMVADIAAVPGIERVIWELMESGTARARRKAAALLRILRRWAAGLDAR 662
G MV AVP + L +SGT RAR KA ALL R G R
Sbjct: 774 STNSGRFCNMVLQEGAVP----PLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 825
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 35/241 (14%)
Query: 109 SKMWLLMQIETAANNFHELTIDLSTLL----DIMP--LQELRLSQDVEDVVVLIKKQCSK 162
SK++ ++QIE+ + +D L + +P L L Q +E + L ++ S
Sbjct: 83 SKVYFVLQIESLLPKMRDTIVDTFQFLMSSKNHLPDELSPASLEQCLEKIKHLSYEEISS 142
Query: 163 RTKGALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKEEIESLE- 221
GAL D +D + P IL ++ E+ GLR++ E +LE
Sbjct: 143 VIDGALRDQRDG----------------VGPSPEILVKIGENTGLRSNQEILIEAVALER 186
Query: 222 -EEIQNQTDQKSK-HFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKSASDANVPADFRC 279
+E+ Q++ ++ F LI +V L L ++ S + ADF C
Sbjct: 187 QKEMAEQSENNAEVEFLDQLIVIVNRMHERLL----------LIKQTQTSSVAILADFFC 236
Query: 280 PISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALW 339
P+SLE+M +PV+V++GQTY++ I WI+ G CPKT QTL HT L+ N +K LIA W
Sbjct: 237 PLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIANW 296
Query: 340 C 340
C
Sbjct: 297 C 297
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 151/283 (53%), Gaps = 16/283 (5%)
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQ 435
LI+ L +S S++ +A +R L++ +D+R IA AI L L S +Q
Sbjct: 426 LIDDLKSS-SLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLL----YSTDERIQ 480
Query: 436 VNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHR 495
+AVT +LNLSI + NK+ I E+ GA+ +I VL++G EAK N+AAT+FSLS + ++
Sbjct: 481 ADAVTCLLNLSINDNNKSLIAES-GAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYK 539
Query: 496 KTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDV 555
+G + ++ L+DL+ G S K+DA A+ NL+ E +++E G V + E MD
Sbjct: 540 TEIG-EAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDP 598
Query: 556 ---LPEESVTILE--AVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICR 610
+ E++V +L A V+ G + + I L ++ GS +E+A A L+ +C
Sbjct: 599 AFGMVEKAVVVLANLATVREGKIA--IGEEGGIPVLVEVVELGSARGKENATAALLQLCT 656
Query: 611 KGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRILR 653
S + G+ + L +SGTAR + KA LL+ +
Sbjct: 657 H--SPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFK 697
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 30/255 (11%)
Query: 109 SKMWLLMQIETAANNFHELTIDLSTLLDI--MPLQELRLSQDVEDVVVLIKKQCSKRTKG 166
++++ +++IE+ A+ E ++++ LL L +S E+ + L+K
Sbjct: 92 TRIFYVLRIESLASKLRESSLEVFQLLKHCEQHLPADLISPSFEECIELVK--------- 142
Query: 167 ALVDSKDDKLRLQVLTTLDQIKKEIVPDHSILKQMFESLGLRNSSACKEE---IESLEEE 223
LV D++ + L KK + P +L ++ ES GLR++ E + +++E+
Sbjct: 143 -LV--ARDEISYTIDQALKDQKKGVGPTSEVLVKIAESTGLRSNQEILVEGVVLTNMKED 199
Query: 224 IQNQTDQKSKHFAAALIGLVRYTKCVLFGASVQKSDSRLRRKKSASDANVPADFRCPISL 283
+ TD ++ A L GL+ T + + S +++ + VP+DFRC +SL
Sbjct: 200 AE-LTDNDTE--AEYLDGLISLT------TQMHEYLSDIKQAQLRCPVRVPSDFRCSLSL 250
Query: 284 ELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNLIALWCREQ 343
ELM +PV+VA+GQT++R I WI+ G CPKT Q L+HT L N ++ +A WC
Sbjct: 251 ELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETN 310
Query: 344 RI----PFDYAASSE 354
+ P + SSE
Sbjct: 311 NVYPPDPLELIHSSE 325
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 189/401 (47%), Gaps = 33/401 (8%)
Query: 272 NVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTA 331
+P FRCPISL+LM +PV ++TGQTYDR SI WI G+ TCP T L+ L+ N
Sbjct: 13 QIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHT 72
Query: 332 LKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLA----TSQSME 387
L+ LI WC R S V + T K A ++ L+++ + T S+
Sbjct: 73 LRRLIQEWCVANR--------SNGVERIPTPKQ--PADPISVRSLLSQASAITGTHVSVR 122
Query: 388 AANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSI 447
+ A+ LR L++ +R IA A +L R L D + + ++ + + L L +
Sbjct: 123 SRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLAL-LVL 181
Query: 448 LEANKTRI--METEGALNGVIEVLRSGATWEAKGNAAATI-FSLSGVHAH--RKTLGRKT 502
L +T + ++ + G + L ++ E + NAAA I L+G + + +
Sbjct: 182 LHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSD 241
Query: 503 RVVKGLMDLVKGGPTSSKRD---ALVAILNLAGDRETVGRLVERG----IVEIVAEAMDV 555
+ +G++DL+K P SS+R + AI L ++T + G +++ +A D
Sbjct: 242 SIFEGVLDLLK-NPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDR 300
Query: 556 LP-EESVTILEAVVK-RGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGG 613
E + +E + + G A T+ + + SD + E AA L+ +C
Sbjct: 301 CDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALC--TA 358
Query: 614 SEMVADIAAVPGIERVIWELMESG-TARARRKAAALLRILR 653
E D AA G+ + L++S T RA+RKA LL++LR
Sbjct: 359 EERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLR 399
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 131/267 (49%), Gaps = 21/267 (7%)
Query: 272 NVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN-TCPKTGQTLAHTNLVTNT 330
+P FRCPISLELM++PV V TGQTYDR SI W+ G+N TCP T L+ L+ N
Sbjct: 13 QIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNH 72
Query: 331 ALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLA----TSQSM 386
L+ LI WC R S V + T K + T + A L+++ + T S+
Sbjct: 73 TLRRLIQEWCVANR--------SNGVERIPTPKQPADPTSVRA--LLSQASAITGTHVSV 122
Query: 387 EAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLS 446
+ A+ LR ++ +R IA A +L + L +T S L ++ ++ L
Sbjct: 123 RSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSS--ELVSESLALLVMLP 180
Query: 447 ILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLS-GVHAH--RKTLGRKTR 503
I E N+ + ++ + L ++ E + NAAA I +S G + + ++
Sbjct: 181 ITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSES 240
Query: 504 VVKGLMDLVKGGPTSSKRDALVAILNL 530
V +G++DL++ P SS+R + I L
Sbjct: 241 VFEGVLDLLR-NPISSRRALKIGIKTL 266
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 47/320 (14%)
Query: 270 DANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTN 329
+ +P+ F+CPIS ELM++PV++A+G TYDR++I W ESG+ TCP T L + N
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPN 89
Query: 330 TALKNLIALWCRE------QRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATS 383
++ +I WC +RIP V +++ + +++A+ A
Sbjct: 90 HTIRRMIQGWCGSSLGGGIERIPTPRVP-------VTSHQVSEICERLSAATRRGDYAAC 142
Query: 384 QSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDT----ASRLPNLQVNAV 439
M V ++ L K +R C+ E GA +L + AS L V+ +
Sbjct: 143 MEM------VTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVL 196
Query: 440 TTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATI-----FSLSGVHAH 494
T +L + + +K + T + N ++E+LR+G NAA I +++ VHA
Sbjct: 197 TWMLPIGLEGQSK---LTTTSSFNRLVELLRNGDQ-----NAAFLIKELLELNVTHVHAL 248
Query: 495 RKTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLA-GDRETVGRLVERGIVEIVAEAM 553
K G + +K + S+ ++L++I ++ ++ETV R +E +V I E +
Sbjct: 249 TKINGVQEAFMKSI------NRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEML 302
Query: 554 ----DVLPEESVTILEAVVK 569
+ + E+++T+L + +
Sbjct: 303 VDSENSVCEKALTVLNVICE 322
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 192/407 (47%), Gaps = 40/407 (9%)
Query: 259 DSRLRRKKSASD---ANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCP 315
D +L KK + ++P+ F CPISLE M++PV + TGQTY+R +I W GH TCP
Sbjct: 47 DEKLDLKKMIKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCP 106
Query: 316 KTGQTLAHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASF 375
T Q L + N L +LI W ++ + SE V G A+E
Sbjct: 107 TTMQELWDDTVTPNKTLHHLIYTWFSQKYVLM--KKRSEDVQG-----RAIE-------- 151
Query: 376 LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQ 435
++ L ++ +A A+ EL+ + +R + E G +++++ LGP T+ + +
Sbjct: 152 ILGTLKKAKG-QARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGS-- 208
Query: 436 VNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHR 495
V +++L + +K+ +M+ ++ ++++L G+ E K N A I L R
Sbjct: 209 -EVVAILVSLDLDSDSKSGLMQP-AKVSLIVDMLNDGSN-ETKINCARLIRGLVEEKGFR 265
Query: 496 KTLGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEI--VAEAM 553
L ++ GLM LVK R+ + L L +V + V +V I V + +
Sbjct: 266 AELVSSHSLLVGLMRLVK---DKRHRNGVSPALRLLKPI-SVHKQVRSLMVSIGAVPQLV 321
Query: 554 DVLP-------EESVTILEAVVKR-GGLTAIVAAYNTIKKLCILLREGSDTSRESAAATL 605
D+LP E ++ +L+A+ G A+ + NTI +L S+ A + L
Sbjct: 322 DILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSIL 381
Query: 606 VTICRKGGSEMVADIAAVPGIERVIWELMESGT-ARARRKAAALLRI 651
++C K E + +A G+ + +++SG A ++++A LL++
Sbjct: 382 WSVC-KLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKL 427
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 181/388 (46%), Gaps = 33/388 (8%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTAL 332
+P+ F CPISLE M++PV + TGQTY+R +I W GH TCP T Q L + N L
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 333 KNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAANDA 392
LI W ++ + SE V G A+E ++ L ++ +A A
Sbjct: 120 HQLIYTWFSQKYVLM--KKRSEDVQG-----RAIE--------ILGTLRKAKG-KAKVHA 163
Query: 393 VYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEANK 452
+ EL+ + + ++ + + G + +++ L P T+ + + A+ ++NL + +K
Sbjct: 164 LSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGS---EAIAILVNLELDSDSK 220
Query: 453 TRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDLV 512
+M+ ++ ++++L G+ E K N A I L R L ++ GLM LV
Sbjct: 221 AGLMQP-ARVSLMVDMLNDGSI-ETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLV 278
Query: 513 KGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDVLPEESVTILEA------ 566
K + + +L + V L+ R + V + +DVLP V LE+
Sbjct: 279 KDRRRRNGVSPALTLLKSVSVHKQVRNLLVR--IGAVPQLVDVLPCLDVECLESALFVLD 336
Query: 567 --VVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGSEMVADIAAVP 624
++ G A+ + NTI LL + S+ A + L ++C K SE + +A
Sbjct: 337 SLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVC-KLASEECSSLAVEV 395
Query: 625 GIERVIWELMESGTARA-RRKAAALLRI 651
G+ + +++SG A ++++A LL++
Sbjct: 396 GLAAKLLLVIQSGCDPALKQRSAELLKL 423
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 138/277 (49%), Gaps = 35/277 (12%)
Query: 392 AVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNLSILEAN 451
A E+R L+ ++R I GAI L L S Q +AVT +LNLSI E N
Sbjct: 492 AAAEIRHLTINSIENRVHIGRCGAITPLLSLL----YSEEKLTQEHAVTALLNLSISELN 547
Query: 452 KTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLGRKTRVVKGLMDL 511
K I+E GA+ ++ VL +G AK N+AA++FSLS + +R+ +G+ ++ L++L
Sbjct: 548 KAMIVEV-GAIEPLVHVLNTGND-RAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNL 605
Query: 512 VKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDV---LPEESVTIL---- 564
+ G K+DA A+ NL+ + R+V+ V+ + E +D + +++V +L
Sbjct: 606 LGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLS 665
Query: 565 ------EAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICRKGGS--EM 616
+A+V+ GG+ +V + GS +E+AA+ L+ +C +
Sbjct: 666 AVGEGRQAIVREGGIPLLVETVDL----------GSQRGKENAASVLLQLCLNSPKFCTL 715
Query: 617 VADIAAVPGIERVIWELMESGTARARRKAAALLRILR 653
V A+P + L +SGT RA+ KA LL R
Sbjct: 716 VLQEGAIPP----LVALSQSGTQRAKEKAQQLLSHFR 748
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 35/268 (13%)
Query: 89 EEMYIVLQRMKTLIEDCYNG-SKMWLLMQIETAANNFHELTIDLSTLLDIMPLQELRLSQ 147
E++ V+ + + +ED SK++ + Q E ++++S +L L+LSQ
Sbjct: 67 EDLDSVVNQAREFLEDWSPKLSKLFGVFQCEVLLGKVQTCSLEISRIL-------LQLSQ 119
Query: 148 D------VEDVVVLIKKQCSKRTKGALVDSKDDKLRLQVLTTLDQIKKEIVP-DHSILKQ 200
V+ V +++ S + +G L++ ++ LR Q K +I D++ L+
Sbjct: 120 SSPVTSSVQSVERCVQETESFKQEGTLMELMENALRNQ--------KDDITSLDNNHLES 171
Query: 201 MFESLGL-RNSSACKEEIESLEEEIQNQTDQKSKHFAAALIGLVRYTKCVLFGASVQKSD 259
+ + LGL N KE I +E I++Q KS+ L+ C+ +
Sbjct: 172 IIQMLGLISNQDLLKESITVEKERIRSQAS-KSEEDMEQTEQLIELVLCI--------RE 222
Query: 260 SRLRRK--KSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKT 317
L+ + + A ++P FRCP+S ELM +PV+VA+GQT+DR SI W+++G CP+T
Sbjct: 223 HMLKTEFLEVAKGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRT 282
Query: 318 GQTLAHTNLVTNTALKNLIALWCREQRI 345
Q L H L+ N +K +IA W RI
Sbjct: 283 RQVLTHQELIPNYTVKAMIASWLEANRI 310
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 19/291 (6%)
Query: 263 RRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHN-TCPKTGQTL 321
+R+ +S VP +F+C +S +M +PV++ +GQTY+++ I+ W+ H+ TCP Q L
Sbjct: 64 KRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL--NHDLTCPTAKQVL 121
Query: 322 AHTNLVTNTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLA 381
L N + LI WC + +D A VT T S L +
Sbjct: 122 YRVCLTPNHLINELITRWCLANK--YDRPAPKPSDIDYVTEL----FTDGIESLLQRISS 175
Query: 382 TSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGP-----DTASRLPNLQV 436
S S+ +A EL ++ + R + + + R L P D P LQ
Sbjct: 176 PSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDS-ITRLLTPLSVLGDEVDSNPELQE 234
Query: 437 NAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRK 496
N VT + N+S E NKT + E + + + ++ G+ + NA T+ SLS + +++
Sbjct: 235 NIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVV-TRRNATLTLASLSDIDSNKI 293
Query: 497 TLGRKTRVVKGLMDLV-KGGPTSSKRDALVAILNLAGD-RETVGRLVERGI 545
+G +K L+DL+ + S+ DAL A+++L D RE + + G+
Sbjct: 294 IIGNSV-ALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGL 343
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 35/289 (12%)
Query: 269 SDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVT 328
S VP +F C +S ++M P+++A+GQT+++ I W++ TCP+T Q L H ++
Sbjct: 61 SPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIP 119
Query: 329 NTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEA 388
N + +I WC FD +S++V + T LE+ L+ ++++ S+E
Sbjct: 120 NHLINEVIKEWCLIHN--FDRPKTSDEVIDLFT--GDLES-------LLQRISSPSSVED 168
Query: 389 ANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRL-----------PNLQVN 437
+A EL K S C+ I PD+ +RL P N
Sbjct: 169 QTEAAKELA--LKAKRFSSVCVYFVAKI--------PDSITRLLTPLSISEDSNPEFLEN 218
Query: 438 AVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKT 497
VT + S E NKT + E L + + ++ G + ++AAT+ SLS +++
Sbjct: 219 IVTALHIFSTSEKNKTLVAENPLVLPLLAKYMKQGTVL-TRIHSAATVNSLSYTDSNKII 277
Query: 498 LGRKTRVVKGLMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIV 546
+G + V+K L+ +++ G + + +A A+ NL +E + V G++
Sbjct: 278 IG-NSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLI 325
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 179/402 (44%), Gaps = 35/402 (8%)
Query: 269 SDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVT 328
S+ +P +F+CPIS++LM++PV+++TG TYDR SI WI SG+ TCP T L + +
Sbjct: 27 SEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP 86
Query: 329 NTALKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQ---S 385
N ++ +I WC E+ P + + T + L ++ + KL+++
Sbjct: 87 NHTIRKMIQGWCVEKGSPL--------IQRIPTPRVPLMPCEVYE--ISRKLSSATRRGD 136
Query: 386 MEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTASRLPNLQVNAVTTILNL 445
E + +++ L +R C+ E +L + +N + ++L
Sbjct: 137 YEKCGVIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTW 196
Query: 446 SI---LE-----ANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKT 497
LE A+ T G L + +R A + K I SL H +
Sbjct: 197 MFPIGLEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMK-----EILSLDETRVH--S 249
Query: 498 LGRKTRVVKGLMDLVKG-GPTSSKRDALVAILNLAGDR-ETVGRLVERGI----VEIVAE 551
+ V + L+ L++ +SS + +L+AI + + E +E G+ VE++ +
Sbjct: 250 FAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVD 309
Query: 552 AMDVLPEESVTILEAVVK-RGGLTAIVAAYNTIKKLCILLREGSDTSRESAAATLVTICR 610
A + + E+++ +L+A+ + G + + L + + S+ + S+ + ++ + +
Sbjct: 310 AENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWK 369
Query: 611 KGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRIL 652
G + V D + ++V+ L + KA LL+++
Sbjct: 370 TGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMM 411
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTAL 332
VP FRCPISL++M++PV + TG TYDR SI W++ G+NTCP T Q L + + + N L
Sbjct: 10 VPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTL 69
Query: 333 KNLIALW 339
+ LI +W
Sbjct: 70 QRLIEIW 76
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 264 RKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAH 323
R ++ + VP+ F+CPISL++MR+PV + TG TYDR SI W++ G+NTCP T Q L
Sbjct: 3 RDETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKT 62
Query: 324 TNLVTNTALKNLIALW 339
+ V N L+ LI +W
Sbjct: 63 KDFVPNLTLQRLINIW 78
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESG-HNTCPKTGQTLAHTNLVTNTA 331
+P+ F CPISL++M++PV+V+TG TYDR+SI W+ SG N+CP T Q + T+L N
Sbjct: 7 IPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHT 66
Query: 332 LKNLIALWC 340
L+ LI WC
Sbjct: 67 LRRLIQSWC 75
>sp|Q9FL17|PUB40_ARATH U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40
PE=2 SV=2
Length = 550
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 197/470 (41%), Gaps = 110/470 (23%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTAL 332
+PA+F CPIS LM +P++V++G +Y+R + G P + ++ N AL
Sbjct: 58 IPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPD----FSTVIPNLAL 113
Query: 333 KNLIALWCREQRI-----PFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSME 387
K+ I WC E+R P + AA+ + + ++ K ++ LI + S+
Sbjct: 114 KSAIHSWC-ERRCFPPPKPLNSAAAEKLILALMEKKPQRRKVSVSEKELIQAIRDKPSVR 172
Query: 388 AANDAVYEL-------------------RSLSKTDSDSRACIAEAGAIALLARHLGPDTA 428
N A EL R+L T S +G I L +L P+
Sbjct: 173 -LNHAATELDRRPNYFNSSSDESIASSSRTLQLTTKPSCFSSPSSGEIESLEPNLTPEEE 231
Query: 429 SRLPNLQVNAVTTI---------------------------------------------- 442
+ L L+ N ++ I
Sbjct: 232 ALLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVT 291
Query: 443 ---LNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGNAAATIFSLSGVHAHRKTLG 499
+NLS+ ++NK +I+ + G + +I+VL+ G+ EA+ ++A IFSL+ ++ +G
Sbjct: 292 AVLVNLSLEKSNKVKIVRS-GIVPPLIDVLKCGSV-EAQEHSAGVIFSLALEDENKTAIG 349
Query: 500 RKTRVVKG---LMDLVKGGPTSSKRDALVAILNLAGDRETVGRLVERGIVEIVAEAMDVL 556
V+ G L+ L++ G ++ D+ +A+ +L+ + G+LV+ G V+++ M L
Sbjct: 350 ----VLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLL-GMVSL 404
Query: 557 PEESVTIL-------------EAVVKRGGLTAIVAAYNTIKKLCILLREGSDTSRESAAA 603
+ +L A++ GG+ +V RE ++++RES A
Sbjct: 405 GQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRD-------REVNESTRESCVA 457
Query: 604 TLVTICRKGGSEMVADIAAVPGIERVIWELMESGTARARRKAAALLRILR 653
L + GG A +E ++ ++ SG RA++KA +L +LR
Sbjct: 458 VLYGLSHDGGLRFKGLAMAANAVEELV-KVERSGRERAKQKARRVLEVLR 506
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTAL 332
VP F+CPISL++M++PV ++TG TYDR SI W++ G+NTCP T Q L + V N L
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTL 70
Query: 333 KNLIALW 339
LI W
Sbjct: 71 HRLIDHW 77
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 262 LRRKKSASDAN--VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQ 319
LR++ S SD + P F CPISLE+M++P + A G TY+ ++IS W++ GH T P T
Sbjct: 312 LRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNT 371
Query: 320 TLAHTNLVTNTALKNLIALW 339
L HT LV N AL++ I W
Sbjct: 372 KLHHTKLVPNLALRSAIQEW 391
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 273 VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESG-HNTCPKTGQTLAHTNLVTNTA 331
+P F CPISLE+M++PV+V+TG TYDR SI W+ +G N+CP T Q + +L N
Sbjct: 12 IPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHT 71
Query: 332 LKNLIALWCREQRIPFDYAASSEKVNGVVTNKAALEATKMTASFLINKLATSQSMEAAND 391
L+ LI WC +S V + T + + K LI A+S E
Sbjct: 72 LRRLIQSWCT--------LNASYGVERIPTPRPPI--CKSEIEKLIRDSASSH--ENQVK 119
Query: 392 AVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDT 427
+ LR + ++ ++ C+ AG LA + D+
Sbjct: 120 CLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDS 155
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P+ F CPIS E+MR P V A G TY+ +S+ W+++GH T P T LAH NLV N AL+
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 334 NLIALW 339
+ I W
Sbjct: 558 SAIQEW 563
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 263 RRKKSASDAN---VPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQ 319
R ++ AS +N P F CPI+ ++M +P V A G TY+ ++IS W E GH T P +
Sbjct: 340 REEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINK 399
Query: 320 TLAHTNLVTNTALKNLIALW 339
L HT+LV N AL++ I W
Sbjct: 400 RLPHTSLVPNLALRSAIQEW 419
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 276 DFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALKNL 335
DF+CPIS+E+MR+P V A G TY+ + W+ SG T PKT + L + NLV N L+ +
Sbjct: 236 DFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRII 295
Query: 336 IALW 339
I W
Sbjct: 296 IKDW 299
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 256 QKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCP 315
Q S S + +K + + P DF CPI+ ++ +PV + TGQTY+R++I W+ +G+ TCP
Sbjct: 494 QSSSSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCP 553
Query: 316 KTGQTLAHTNLV-TNTALKNLIALWCREQ 343
T Q L+ + L TN LK LI W +EQ
Sbjct: 554 ITRQPLSASILPKTNYVLKRLITSW-KEQ 581
>sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33
PE=2 SV=2
Length = 834
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P F CPI E+M++P V A G TY+ ++I W++S H+T P T L+HT+L+ N AL+
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 334 NLIALWCREQ 343
+ I W +
Sbjct: 824 SAIQEWLQHH 833
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 249 VLFGASVQKSD-------SRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQ 301
+L G+S+ +SD S + +K + + P DF CPI+ ++ +PV + TGQTY+R+
Sbjct: 480 ILNGSSLCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQTYERK 539
Query: 302 SISLWIESGHNTCPKTGQTLAHTNLV-TNTALKNLIALWCREQ 343
+I W+ +G+ TCP T Q L+ + L TN LK LI W +EQ
Sbjct: 540 AIQEWLRTGNTTCPITRQPLSASILPKTNYVLKRLITSW-KEQ 581
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 256 QKSDSRLRRKKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCP 315
Q S S + +K + P DF CPI+ ++ +PV + TGQTY+R++I W+ +G+ TCP
Sbjct: 496 QSSSSFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCP 555
Query: 316 KTGQTLAHTNLV-TNTALKNLIALWCREQ 343
T Q L+ L TN LK LI W +EQ
Sbjct: 556 ITRQALSANILPKTNYVLKRLIVSW-KEQ 583
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 266 KSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLA-HT 324
+ + +P F CPISLE+M++PV +G TYDRQ+I W+E +CP T Q L +
Sbjct: 3 QEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDS 61
Query: 325 NLVTNTALKNLIALWCREQ 343
+L N L+ LI WC E
Sbjct: 62 DLTPNHMLRRLIQHWCVEN 80
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 274 PADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTNTALK 333
P+ F CPI+ E+M++P A G TY+ +SI W+ +GH T P T L+H LV N AL+
Sbjct: 354 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 413
Query: 334 NLI 336
+ I
Sbjct: 414 SAI 416
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 37/273 (13%)
Query: 272 NVPADFRCPISLELMRNPVVVATGQTYDRQSISLWI----ESGHN-TCPKTGQTLAHTNL 326
N+ F CP++ ++M NPV + GQT++R++I W E+G +CP T + L+ T+L
Sbjct: 24 NIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDL 83
Query: 327 VTNTALKNLIALW-CREQRIPFDYAASSEKVNGVVTN-----KAALEATKMTASF----- 375
+ AL+N I W R + D A S + TN K E +
Sbjct: 84 SPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVC 143
Query: 376 ------LINKLATSQSMEAANDAVYELRSLSKTDSDSRACIAEAGAIALLARHLGPDTAS 429
LI + S S E A+ L+ + + D +S+A +AE + + + L + +
Sbjct: 144 NPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSK 203
Query: 430 RLPNLQVNAVTTILNLSILEANKTRIMETEGALNGVIEVLRSGATWEAKGN------AAA 483
+ AV+ + LS EA + E G+++G I +L G T N A
Sbjct: 204 G----REAAVSVLFELSKSEA----LCEKIGSIHGAI-ILLVGLTSSKSENVSTVEKADK 254
Query: 484 TIFSLSGVHAHRKTLGRKTRVVKGLMDLVKGGP 516
T+ +L + + + R+ L L++G P
Sbjct: 255 TLTNLERSEENVRQMAINGRLQPLLAKLLEGSP 287
>sp|Q0DR28|PUB57_ORYSJ U-box domain-containing protein 57 OS=Oryza sativa subsp. japonica
GN=PUB57 PE=2 SV=1
Length = 518
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%)
Query: 265 KKSASDANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHT 324
+ ++ D++VPA F CPIS+E+M++P V + G TY+ ++I W + G + P T L +
Sbjct: 427 QSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNL 486
Query: 325 NLVTNTALKNLIALWCREQR 344
NLV N L++ I + ++Q+
Sbjct: 487 NLVPNRVLRSFIHGYLQQQQ 506
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 270 DANVPADFRCPISLELMRNPVVVATGQTYDRQSISLWIESGHNTCPKTGQTLAHTNLVTN 329
+ +P F+C +S +M +PV++++G T++R I W + G+++CP + + L L N
Sbjct: 216 NGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPN 275
Query: 330 TALKNLIALWC 340
LK+ I+ WC
Sbjct: 276 VELKSQISEWC 286
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,473,117
Number of Sequences: 539616
Number of extensions: 8267558
Number of successful extensions: 29895
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 29530
Number of HSP's gapped (non-prelim): 243
length of query: 683
length of database: 191,569,459
effective HSP length: 124
effective length of query: 559
effective length of database: 124,657,075
effective search space: 69683304925
effective search space used: 69683304925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)