Query 048796
Match_columns 555
No_of_seqs 517 out of 4056
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 23:27:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048796.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048796hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.2E-34 2.1E-38 319.2 24.2 266 5-271 415-748 (768)
2 1ogq_A PGIP-2, polygalacturona 100.0 2.6E-32 8.9E-37 273.2 16.1 248 8-267 50-308 (313)
3 3rgz_A Protein brassinosteroid 100.0 3E-30 1E-34 289.2 23.2 239 7-254 393-706 (768)
4 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-30 7.1E-35 259.4 10.9 228 4-242 72-306 (313)
5 1ozn_A Reticulon 4 receptor; N 100.0 4E-28 1.4E-32 239.4 22.6 226 10-245 13-242 (285)
6 3v47_A TOLL-like receptor 5B a 100.0 4.3E-28 1.5E-32 255.4 23.5 247 8-254 30-373 (455)
7 3v47_A TOLL-like receptor 5B a 100.0 4.3E-28 1.5E-32 255.4 21.7 251 5-264 51-409 (455)
8 2id5_A Lingo-1, leucine rich r 100.0 4.8E-28 1.6E-32 256.8 21.7 245 5-249 53-317 (477)
9 1ozn_A Reticulon 4 receptor; N 100.0 6.1E-28 2.1E-32 238.1 18.4 235 7-250 31-270 (285)
10 3zyi_A Leucine-rich repeat-con 100.0 3E-27 1E-31 248.9 22.6 231 10-252 56-290 (452)
11 2z66_A Variable lymphocyte rec 100.0 1.2E-27 4.1E-32 238.6 18.3 230 11-251 10-246 (306)
12 4fcg_A Uncharacterized protein 100.0 2.9E-27 9.9E-32 238.0 20.6 221 7-241 80-314 (328)
13 3j0a_A TOLL-like receptor 5; m 100.0 1.1E-27 3.8E-32 271.1 19.5 250 6-264 264-561 (844)
14 3zyj_A Leucine-rich repeat-con 99.9 5.7E-27 1.9E-31 245.9 22.6 224 9-243 65-294 (440)
15 3o6n_A APL1; leucine-rich repe 99.9 6.6E-27 2.3E-31 241.4 21.3 235 5-242 42-309 (390)
16 2id5_A Lingo-1, leucine rich r 99.9 5.3E-27 1.8E-31 248.7 21.1 242 4-245 76-337 (477)
17 3oja_B Anopheles plasmodium-re 99.9 6.1E-27 2.1E-31 255.1 21.6 256 6-264 49-359 (597)
18 3zyi_A Leucine-rich repeat-con 99.9 2.7E-26 9.2E-31 241.5 25.1 227 8-245 75-307 (452)
19 4fcg_A Uncharacterized protein 99.9 8.3E-27 2.9E-31 234.7 19.4 213 28-254 80-303 (328)
20 3zyj_A Leucine-rich repeat-con 99.9 3.4E-26 1.2E-30 240.0 24.2 245 9-265 44-294 (440)
21 2z66_A Variable lymphocyte rec 99.9 9.9E-27 3.4E-31 231.9 19.1 228 8-245 28-265 (306)
22 1xku_A Decorin; proteoglycan, 99.9 8.5E-26 2.9E-30 227.6 24.7 217 9-241 32-253 (330)
23 3t6q_A CD180 antigen; protein- 99.9 2.5E-26 8.4E-31 251.0 21.3 251 4-264 297-561 (606)
24 2ft3_A Biglycan; proteoglycan, 99.9 9.4E-26 3.2E-30 227.5 23.9 235 9-249 34-285 (332)
25 3t6q_A CD180 antigen; protein- 99.9 2.2E-26 7.5E-31 251.4 20.1 241 4-254 274-526 (606)
26 2z80_A TOLL-like receptor 2, v 99.9 4.3E-27 1.5E-31 239.5 12.8 205 6-220 29-236 (353)
27 3o6n_A APL1; leucine-rich repe 99.9 4.7E-26 1.6E-30 235.0 20.3 253 6-264 67-353 (390)
28 2z62_A TOLL-like receptor 4, v 99.9 6.2E-26 2.1E-30 222.6 20.2 224 11-245 10-241 (276)
29 1xku_A Decorin; proteoglycan, 99.9 1.4E-25 4.9E-30 226.0 23.0 226 8-249 52-284 (330)
30 3oja_B Anopheles plasmodium-re 99.9 4.2E-26 1.4E-30 248.5 20.4 247 6-265 73-382 (597)
31 4g8a_A TOLL-like receptor 4; l 99.9 1.5E-25 5E-30 245.7 23.0 133 8-140 52-188 (635)
32 2ft3_A Biglycan; proteoglycan, 99.9 1.4E-25 4.7E-30 226.3 20.2 239 8-251 54-319 (332)
33 2o6q_A Variable lymphocyte rec 99.9 6.2E-25 2.1E-29 214.8 24.2 201 9-219 17-218 (270)
34 3rfs_A Internalin B, repeat mo 99.9 1.5E-26 5.3E-31 226.5 12.7 229 7-253 18-247 (272)
35 4eco_A Uncharacterized protein 99.9 1.1E-26 3.7E-31 254.8 12.5 233 3-249 73-423 (636)
36 1ziw_A TOLL-like receptor 3; i 99.9 2.5E-25 8.7E-30 246.3 23.6 234 5-247 326-603 (680)
37 2z80_A TOLL-like receptor 2, v 99.9 5.3E-26 1.8E-30 231.4 16.2 228 8-245 52-318 (353)
38 4eco_A Uncharacterized protein 99.9 2.6E-26 8.9E-31 251.7 14.2 229 4-247 202-475 (636)
39 3vq2_A TLR4, TOLL-like recepto 99.9 6.5E-26 2.2E-30 247.6 17.3 223 6-241 305-534 (606)
40 2o6q_A Variable lymphocyte rec 99.9 9E-25 3.1E-29 213.7 23.6 206 28-245 15-222 (270)
41 1ziw_A TOLL-like receptor 3; i 99.9 4.3E-25 1.5E-29 244.4 23.8 237 8-245 381-626 (680)
42 1wwl_A Monocyte differentiatio 99.9 1.3E-26 4.3E-31 231.8 8.3 226 7-243 42-289 (312)
43 2z7x_B TOLL-like receptor 1, v 99.9 2.6E-25 9.1E-30 238.2 18.7 104 8-114 21-128 (520)
44 3j0a_A TOLL-like receptor 5; m 99.9 9.7E-25 3.3E-29 247.1 22.7 94 158-251 266-361 (844)
45 3vq2_A TLR4, TOLL-like recepto 99.9 3E-25 1E-29 242.3 17.7 232 6-253 283-522 (606)
46 1p9a_G Platelet glycoprotein I 99.9 1.9E-24 6.6E-29 213.4 21.7 201 6-243 8-210 (290)
47 2z7x_B TOLL-like receptor 1, v 99.9 1.2E-24 4.1E-29 233.1 21.9 236 5-253 42-445 (520)
48 2z62_A TOLL-like receptor 4, v 99.9 9.1E-25 3.1E-29 214.3 18.7 209 8-223 28-241 (276)
49 4ecn_A Leucine-rich repeat pro 99.9 8.3E-26 2.8E-30 252.8 12.7 229 3-245 315-661 (876)
50 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 8.5E-25 2.9E-29 236.6 19.4 105 8-115 52-160 (562)
51 3oja_A Leucine-rich immune mol 99.9 1.1E-25 3.7E-30 238.7 11.9 211 8-241 34-250 (487)
52 1p9a_G Platelet glycoprotein I 99.9 2.5E-24 8.5E-29 212.6 20.5 199 51-265 8-210 (290)
53 2z63_A TOLL-like receptor 4, v 99.9 6.2E-25 2.1E-29 237.9 17.4 233 5-253 279-519 (570)
54 3o53_A Protein LRIM1, AGAP0063 99.9 1.4E-25 4.8E-30 224.8 10.3 221 7-250 33-260 (317)
55 4g8a_A TOLL-like receptor 4; l 99.9 5.9E-24 2E-28 232.9 23.9 262 4-265 72-582 (635)
56 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 2.2E-24 7.6E-29 233.3 19.9 239 4-248 72-448 (562)
57 2z81_A CD282 antigen, TOLL-lik 99.9 1E-24 3.4E-29 235.3 16.1 165 8-172 26-210 (549)
58 1wwl_A Monocyte differentiatio 99.9 7.3E-25 2.5E-29 219.0 13.8 220 10-243 65-311 (312)
59 4ecn_A Leucine-rich repeat pro 99.9 1.5E-23 5E-28 234.7 24.8 231 7-254 547-808 (876)
60 3rfs_A Internalin B, repeat mo 99.9 1.8E-24 6.2E-29 211.7 15.1 205 5-227 38-243 (272)
61 4fmz_A Internalin; leucine ric 99.9 4E-23 1.4E-27 209.4 23.0 224 5-252 85-311 (347)
62 4fmz_A Internalin; leucine ric 99.9 2.8E-23 9.7E-28 210.6 21.1 219 5-245 107-328 (347)
63 1o6v_A Internalin A; bacterial 99.9 4.1E-23 1.4E-27 218.1 22.4 214 6-242 175-389 (466)
64 3m19_A Variable lymphocyte rec 99.9 2.2E-23 7.5E-28 201.5 18.4 159 54-221 36-194 (251)
65 2xwt_C Thyrotropin receptor; s 99.9 6.9E-24 2.3E-28 203.4 13.7 208 18-239 21-237 (239)
66 2z63_A TOLL-like receptor 4, v 99.9 2.1E-23 7.1E-28 225.9 19.1 226 9-246 305-536 (570)
67 3bz5_A Internalin-J, INLJ; leu 99.9 1E-22 3.5E-27 214.0 22.8 219 6-245 40-281 (457)
68 3bz5_A Internalin-J, INLJ; leu 99.9 1.8E-22 6.3E-27 212.0 24.6 202 27-249 40-254 (457)
69 1o6v_A Internalin A; bacterial 99.9 1.2E-22 4.1E-27 214.5 22.5 216 6-242 66-301 (466)
70 3oja_A Leucine-rich immune mol 99.9 1.3E-23 4.3E-28 222.8 14.2 202 28-252 33-237 (487)
71 3o53_A Protein LRIM1, AGAP0063 99.9 4.2E-24 1.4E-28 214.0 9.9 222 8-252 10-237 (317)
72 3m19_A Variable lymphocyte rec 99.9 2.2E-22 7.4E-27 194.5 20.9 180 8-197 14-194 (251)
73 4glp_A Monocyte differentiatio 99.9 1.1E-23 3.7E-28 210.3 11.1 181 54-242 92-286 (310)
74 2z81_A CD282 antigen, TOLL-lik 99.9 4.7E-23 1.6E-27 222.2 15.6 229 7-245 4-240 (549)
75 1h6u_A Internalin H; cell adhe 99.9 3.8E-23 1.3E-27 206.0 13.0 211 9-242 20-231 (308)
76 4glp_A Monocyte differentiatio 99.9 1E-22 3.6E-27 203.1 15.1 227 7-242 63-308 (310)
77 1h6u_A Internalin H; cell adhe 99.9 2.6E-22 8.8E-27 200.0 16.9 192 5-220 38-231 (308)
78 2ast_B S-phase kinase-associat 99.9 1.3E-23 4.5E-28 212.0 6.7 231 8-248 70-313 (336)
79 2xwt_C Thyrotropin receptor; s 99.9 2.5E-22 8.4E-27 192.6 14.2 195 8-217 31-237 (239)
80 2ca6_A RAN GTPase-activating p 99.9 3.4E-24 1.2E-28 220.7 0.8 230 6-244 30-319 (386)
81 3g06_A SSPH2 (leucine-rich rep 99.9 1.6E-21 5.4E-26 211.3 21.3 218 8-249 61-305 (622)
82 1jl5_A Outer protein YOPM; leu 99.9 4.2E-21 1.5E-25 201.5 23.9 199 10-242 93-291 (454)
83 2o6s_A Variable lymphocyte rec 99.9 1.5E-21 5.2E-26 182.9 17.9 182 10-207 9-190 (208)
84 1jl5_A Outer protein YOPM; leu 99.9 5.5E-21 1.9E-25 200.6 23.4 209 8-241 131-350 (454)
85 3cvr_A Invasion plasmid antige 99.9 5.4E-21 1.9E-25 204.7 18.8 185 8-227 59-251 (571)
86 3goz_A Leucine-rich repeat-con 99.9 1.7E-22 5.7E-27 206.2 5.3 229 12-245 2-270 (362)
87 2o6s_A Variable lymphocyte rec 99.9 6.8E-21 2.3E-25 178.4 15.7 162 78-253 29-190 (208)
88 3goz_A Leucine-rich repeat-con 99.9 8.1E-23 2.8E-27 208.6 2.2 235 7-246 21-302 (362)
89 3g06_A SSPH2 (leucine-rich rep 99.8 8.3E-20 2.8E-24 197.8 25.0 221 8-254 40-286 (622)
90 4ay9_X Follicle-stimulating ho 99.8 2E-20 6.9E-25 189.8 18.3 225 10-245 11-240 (350)
91 2ast_B S-phase kinase-associat 99.8 5.4E-22 1.8E-26 200.1 3.8 221 8-238 47-282 (336)
92 3cvr_A Invasion plasmid antige 99.8 3.6E-20 1.2E-24 198.3 18.1 185 30-251 60-253 (571)
93 1h6t_A Internalin B; cell adhe 99.8 1.3E-20 4.3E-25 186.2 10.7 168 52-242 45-214 (291)
94 1m9s_A Internalin B; cell inva 99.8 1.1E-20 3.7E-25 204.5 10.5 193 6-221 19-212 (605)
95 2ca6_A RAN GTPase-activating p 99.8 9.3E-22 3.2E-26 202.5 1.7 210 5-223 57-320 (386)
96 2xot_A Amphoterin-induced prot 99.8 5E-20 1.7E-24 187.7 14.1 178 32-221 21-204 (361)
97 1z7x_W Ribonuclease inhibitor; 99.8 6.2E-22 2.1E-26 208.6 -1.0 229 5-242 110-384 (461)
98 2v70_A SLIT-2, SLIT homolog 2 99.8 4.8E-20 1.6E-24 174.2 11.9 135 80-223 35-170 (220)
99 2v9t_B SLIT homolog 2 protein 99.8 7E-20 2.4E-24 173.1 13.0 135 78-221 33-167 (220)
100 2xot_A Amphoterin-induced prot 99.8 6.7E-20 2.3E-24 186.8 13.5 178 55-244 20-205 (361)
101 2v70_A SLIT-2, SLIT homolog 2 99.8 2.8E-19 9.6E-24 168.9 16.3 152 33-196 15-167 (220)
102 1z7x_W Ribonuclease inhibitor; 99.8 5.9E-22 2E-26 208.8 -3.8 235 9-247 86-360 (461)
103 2v9t_B SLIT homolog 2 protein 99.8 5.7E-19 2E-23 166.8 16.6 151 33-195 15-165 (220)
104 4ay9_X Follicle-stimulating ho 99.8 1E-19 3.4E-24 184.7 11.2 226 8-246 30-264 (350)
105 1h6t_A Internalin B; cell adhe 99.8 2.9E-19 1E-23 176.3 14.2 190 8-220 24-214 (291)
106 3e6j_A Variable lymphocyte rec 99.8 2.7E-18 9.1E-23 163.3 18.5 153 32-197 22-174 (229)
107 1m9s_A Internalin B; cell inva 99.8 7.8E-19 2.7E-23 189.9 16.5 175 5-200 40-215 (605)
108 3e6j_A Variable lymphocyte rec 99.8 2.7E-18 9.1E-23 163.3 17.7 157 54-223 20-176 (229)
109 4ezg_A Putative uncharacterize 99.8 2.9E-18 1E-22 159.0 11.9 152 52-220 43-195 (197)
110 1xeu_A Internalin C; cellular 99.8 1.3E-18 4.3E-23 169.1 8.8 169 29-221 19-187 (263)
111 1w8a_A SLIT protein; signaling 99.8 4.5E-18 1.6E-22 157.0 12.2 141 102-251 30-172 (192)
112 4ezg_A Putative uncharacterize 99.7 6E-18 2.1E-22 156.9 12.1 154 74-242 41-195 (197)
113 1xeu_A Internalin C; cellular 99.7 1.1E-18 3.8E-23 169.5 7.1 166 54-243 20-187 (263)
114 4b8c_D Glucose-repressible alc 99.7 8.8E-19 3E-23 194.1 6.7 213 8-242 173-405 (727)
115 4b8c_D Glucose-repressible alc 99.7 3.3E-18 1.1E-22 189.5 6.1 187 29-238 173-369 (727)
116 1dce_A Protein (RAB geranylger 99.7 2.4E-20 8.1E-25 200.6 -11.0 193 28-235 348-567 (567)
117 1w8a_A SLIT protein; signaling 99.7 1.1E-16 3.8E-21 147.6 13.7 127 11-138 11-139 (192)
118 2ell_A Acidic leucine-rich nuc 99.7 2.7E-16 9.1E-21 141.7 11.9 132 53-195 24-160 (168)
119 2o6r_A Variable lymphocyte rec 99.7 9.4E-16 3.2E-20 139.4 15.1 130 10-139 9-138 (177)
120 4aoj_A High affinity nerve gro 99.7 1.1E-16 3.9E-21 159.8 9.5 91 460-554 38-134 (329)
121 4asz_A BDNF/NT-3 growth factor 99.7 1.1E-16 3.6E-21 157.8 8.5 92 460-555 10-107 (299)
122 2ell_A Acidic leucine-rich nuc 99.7 2E-16 6.8E-21 142.5 9.5 133 76-219 23-160 (168)
123 2wfh_A SLIT homolog 2 protein 99.7 1.5E-15 5.2E-20 140.0 15.0 126 11-138 13-139 (193)
124 1dce_A Protein (RAB geranylger 99.7 9E-19 3.1E-23 188.3 -7.8 180 50-245 346-550 (567)
125 2wfh_A SLIT homolog 2 protein 99.6 3.9E-16 1.4E-20 144.0 11.0 110 102-221 32-141 (193)
126 3sb4_A Hypothetical leucine ri 99.6 3.5E-16 1.2E-20 157.1 10.1 199 52-253 100-322 (329)
127 4gt4_A Tyrosine-protein kinase 99.6 2.3E-16 8E-21 156.0 8.3 91 460-554 23-120 (308)
128 2je0_A Acidic leucine-rich nuc 99.6 4.7E-16 1.6E-20 137.1 9.4 85 53-139 17-102 (149)
129 2je0_A Acidic leucine-rich nuc 99.6 3.8E-16 1.3E-20 137.7 7.7 128 76-214 16-148 (149)
130 2o6r_A Variable lymphocyte rec 99.6 5.5E-15 1.9E-19 134.3 14.6 129 32-172 10-138 (177)
131 3ogk_B Coronatine-insensitive 99.6 4.9E-17 1.7E-21 176.6 -1.6 209 29-243 293-528 (592)
132 3ogk_B Coronatine-insensitive 99.6 2.1E-16 7.2E-21 171.7 -0.1 131 6-138 162-306 (592)
133 4b9d_A Serine/threonine-protei 99.6 4.7E-15 1.6E-19 148.4 8.5 83 470-554 29-114 (350)
134 4fih_A Serine/threonine-protei 99.5 4.2E-15 1.4E-19 148.5 6.6 83 470-554 79-162 (346)
135 1a9n_A U2A', U2A'; complex (nu 99.5 1.3E-14 4.4E-19 131.7 9.2 129 29-171 19-153 (176)
136 3sb4_A Hypothetical leucine ri 99.5 1.8E-14 6.1E-19 144.6 10.8 235 8-253 25-298 (329)
137 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5.2E-19 131.3 9.1 132 50-195 16-153 (176)
138 3omv_A RAF proto-oncogene seri 99.5 8.8E-15 3E-19 144.2 7.7 88 461-555 34-123 (307)
139 4fie_A Serine/threonine-protei 99.5 8.9E-15 3E-19 149.9 7.5 83 470-554 156-239 (423)
140 4fdw_A Leucine rich hypothetic 99.5 6.3E-13 2.1E-17 136.6 19.4 100 30-134 136-235 (401)
141 1ds9_A Outer arm dynein; leuci 99.5 9.7E-17 3.3E-21 148.8 -8.4 82 54-138 19-106 (198)
142 3g39_A Variable lymphocyte rec 99.5 1.6E-13 5.5E-18 123.6 13.0 85 54-138 31-115 (170)
143 3fpq_A Serine/threonine-protei 99.5 6E-14 2E-18 137.2 10.3 85 470-554 31-120 (290)
144 4aw0_A HPDK1, 3-phosphoinositi 99.5 2.2E-14 7.4E-19 141.2 6.9 83 470-554 37-123 (311)
145 3hmm_A TGF-beta receptor type- 99.5 2.5E-14 8.5E-19 141.5 6.7 84 470-555 8-93 (303)
146 3g39_A Variable lymphocyte rec 99.5 2.6E-13 9E-18 122.2 12.8 106 9-115 10-116 (170)
147 1ds9_A Outer arm dynein; leuci 99.5 4.4E-16 1.5E-20 144.4 -7.0 132 30-174 19-156 (198)
148 2r9u_A Variable lymphocyte rec 99.5 4.4E-13 1.5E-17 121.2 13.0 104 32-138 15-118 (174)
149 2p1m_B Transport inhibitor res 99.5 1.6E-15 5.6E-20 164.7 -4.0 181 51-241 287-494 (594)
150 2r9u_A Variable lymphocyte rec 99.4 5.4E-13 1.9E-17 120.6 12.7 104 10-114 14-118 (174)
151 4g31_A Eukaryotic translation 99.4 2.2E-13 7.6E-18 134.2 10.0 85 470-554 10-106 (299)
152 4g3f_A NF-kappa-beta-inducing 99.4 1.1E-13 3.8E-18 137.7 7.7 78 470-554 63-141 (336)
153 4ase_A Vascular endothelial gr 99.4 1E-13 3.4E-18 139.6 7.1 91 461-555 62-161 (353)
154 4fdw_A Leucine rich hypothetic 99.4 2.3E-12 7.7E-17 132.5 16.8 227 8-252 135-369 (401)
155 2p1m_B Transport inhibitor res 99.4 7.6E-15 2.6E-19 159.4 -2.6 235 7-244 104-388 (594)
156 3hyh_A Carbon catabolite-derep 99.4 2.3E-13 7.8E-18 131.9 7.4 82 470-554 18-103 (275)
157 3ubd_A Ribosomal protein S6 ki 99.4 1.3E-13 4.3E-18 135.6 3.1 83 470-554 29-117 (304)
158 3un9_A NLR family member X1; l 99.4 7.9E-15 2.7E-19 149.4 -7.0 161 54-219 73-252 (372)
159 3uto_A Twitchin; kinase, muscl 99.3 1.2E-12 4E-17 140.8 9.4 83 470-554 162-245 (573)
160 3un9_A NLR family member X1; l 99.3 1.8E-14 6.2E-19 146.7 -4.6 172 28-204 71-261 (372)
161 2ifg_A High affinity nerve gro 99.3 6.3E-12 2.1E-16 126.9 10.8 131 106-248 13-148 (347)
162 4b99_A Mitogen-activated prote 99.3 4.6E-12 1.6E-16 129.7 8.5 85 470-555 59-150 (398)
163 2qkw_B Protein kinase; three-h 99.3 8.6E-12 2.9E-16 124.4 9.0 83 470-554 44-126 (321)
164 3s95_A LIMK-1, LIM domain kina 99.3 1.2E-11 4.2E-16 122.6 10.0 83 470-554 15-98 (310)
165 2c30_A Serine/threonine-protei 99.2 1.5E-11 5.2E-16 122.7 10.2 82 471-554 51-133 (321)
166 3fxz_A Serine/threonine-protei 99.2 2E-11 6.8E-16 120.4 10.0 83 470-554 25-108 (297)
167 3v5w_A G-protein coupled recep 99.2 1.7E-11 5.7E-16 131.8 9.6 91 460-554 186-283 (689)
168 2ifg_A High affinity nerve gro 99.2 3.1E-11 1.1E-15 121.8 10.7 66 73-138 27-93 (347)
169 2x4f_A Myosin light chain kina 99.2 2.5E-11 8.7E-16 123.7 8.8 83 470-554 94-177 (373)
170 2qol_A Ephrin receptor; recept 99.2 3E-11 1E-15 123.2 8.3 83 470-554 50-137 (373)
171 4f9c_A Cell division cycle 7-r 99.2 2.9E-11 9.8E-16 122.4 8.0 81 470-554 26-111 (361)
172 4hcu_A Tyrosine-protein kinase 99.2 6.6E-11 2.2E-15 114.7 10.0 82 470-554 15-96 (269)
173 3fe3_A MAP/microtubule affinit 99.2 7.7E-11 2.6E-15 117.9 10.5 83 470-554 20-105 (328)
174 3uim_A Brassinosteroid insensi 99.2 3E-11 1E-15 120.7 7.4 95 458-554 18-118 (326)
175 3uqc_A Probable conserved tran 99.2 4.2E-11 1.4E-15 117.4 8.0 83 470-554 36-122 (286)
176 3cbl_A C-FES, proto-oncogene t 99.2 3.3E-11 1.1E-15 123.1 7.3 83 470-554 119-203 (377)
177 2yab_A Death-associated protei 99.1 6.8E-11 2.3E-15 119.9 9.4 83 470-554 17-106 (361)
178 3sxs_A Cytoplasmic tyrosine-pr 99.1 9.5E-11 3.3E-15 113.4 9.9 82 470-554 13-94 (268)
179 1o6l_A RAC-beta serine/threoni 99.1 6.9E-11 2.4E-15 118.7 9.1 83 470-554 10-96 (337)
180 3ugc_A Tyrosine-protein kinase 99.1 4.1E-11 1.4E-15 117.8 7.4 85 470-554 15-104 (295)
181 3p86_A Serine/threonine-protei 99.1 8.6E-11 2.9E-15 116.5 9.7 82 470-554 42-125 (309)
182 3kul_A Ephrin type-A receptor 99.1 5.9E-11 2E-15 118.6 8.3 83 470-554 54-141 (325)
183 2nru_A Interleukin-1 receptor- 99.1 1.6E-10 5.6E-15 114.1 11.5 93 459-554 14-121 (307)
184 1kob_A Twitchin; kinase, intra 99.1 1.2E-10 4.1E-15 119.2 10.6 83 470-554 56-139 (387)
185 3c0i_A Peripheral plasma membr 99.1 9.2E-11 3.1E-15 118.5 9.5 83 470-554 29-117 (351)
186 1k9a_A Carboxyl-terminal SRC k 99.1 1E-10 3.4E-15 122.4 10.1 81 470-554 198-278 (450)
187 4euu_A Serine/threonine-protei 99.1 1.2E-10 4.1E-15 115.9 10.1 85 470-554 14-100 (319)
188 2ac3_A MAP kinase-interacting 99.1 1.5E-10 5.1E-15 114.9 10.8 83 470-554 18-102 (316)
189 4fvq_A Tyrosine-protein kinase 99.1 8.3E-11 2.8E-15 115.1 8.8 83 470-554 13-103 (289)
190 2y0a_A Death-associated protei 99.1 1.7E-10 5.7E-15 115.4 11.1 83 470-554 16-105 (326)
191 2psq_A Fibroblast growth facto 99.1 8.2E-11 2.8E-15 119.8 8.9 83 470-554 86-178 (370)
192 3zgw_A Maternal embryonic leuc 99.1 1E-10 3.5E-15 117.8 9.5 83 470-554 15-99 (347)
193 1tki_A Titin; serine kinase, m 99.1 9.5E-11 3.2E-15 116.9 9.1 82 470-554 10-92 (321)
194 3gen_A Tyrosine-protein kinase 99.1 1.3E-10 4.4E-15 113.5 9.7 82 470-554 29-110 (283)
195 3qd2_B Eukaryotic translation 99.1 1.7E-10 5.8E-15 115.2 10.8 64 470-533 11-76 (332)
196 1opk_A P150, C-ABL, proto-onco 99.1 6E-11 2E-15 125.7 7.6 82 470-554 225-307 (495)
197 1qcf_A Haematopoetic cell kina 99.1 8.9E-11 3E-15 123.0 8.7 81 470-554 193-273 (454)
198 3kmu_A ILK, integrin-linked ki 99.1 7.4E-11 2.5E-15 114.2 7.5 84 470-554 15-100 (271)
199 3f3z_A Calcium/calmodulin-depe 99.1 1.8E-10 6.3E-15 112.0 10.3 83 470-554 14-97 (277)
200 1fot_A TPK1 delta, CAMP-depend 99.1 1E-10 3.5E-15 116.5 8.3 83 470-554 11-97 (318)
201 3tki_A Serine/threonine-protei 99.1 7.3E-11 2.5E-15 117.8 7.2 83 470-554 12-96 (323)
202 3hko_A Calcium/calmodulin-depe 99.1 1.4E-10 4.7E-15 116.7 9.3 83 470-554 31-119 (345)
203 4eqm_A Protein kinase; transfe 99.1 1.4E-10 4.7E-15 114.1 9.1 83 470-554 16-102 (294)
204 2clq_A Mitogen-activated prote 99.1 1.6E-10 5.6E-15 113.3 9.6 83 470-554 27-110 (295)
205 1fmk_A C-SRC, P60-SRC, tyrosin 99.1 1.2E-10 4.1E-15 121.9 9.1 82 470-555 189-270 (452)
206 4aw2_A Serine/threonine-protei 99.1 5.5E-11 1.9E-15 123.5 6.5 83 470-554 79-165 (437)
207 2bdw_A Hypothetical protein K1 99.1 2.2E-10 7.5E-15 116.3 10.6 83 470-554 34-119 (362)
208 4eut_A Serine/threonine-protei 99.1 1.6E-10 5.4E-15 118.8 9.2 86 470-555 14-101 (396)
209 2h8h_A Proto-oncogene tyrosine 99.1 1.2E-10 4.2E-15 124.4 8.7 82 470-555 272-353 (535)
210 3kn6_A Ribosomal protein S6 ki 99.1 2.3E-10 7.9E-15 114.3 10.1 80 470-554 16-97 (325)
211 3v8s_A RHO-associated protein 99.1 5.7E-11 1.9E-15 122.4 5.7 83 470-554 74-160 (410)
212 1luf_A Muscle-specific tyrosin 99.1 1.4E-10 4.9E-15 116.5 8.6 83 470-554 52-141 (343)
213 3lxl_A Tyrosine-protein kinase 99.1 2.3E-10 7.7E-15 114.3 9.9 85 470-554 28-117 (327)
214 3gni_B Strad alpha; kinase fol 99.1 1.6E-10 5.4E-15 118.5 8.9 83 470-554 30-117 (389)
215 3a62_A Ribosomal protein S6 ki 99.1 1.6E-10 5.3E-15 115.6 8.5 83 470-554 22-112 (327)
216 2jam_A Calcium/calmodulin-depe 99.1 2.9E-10 9.8E-15 112.3 10.2 83 470-554 14-97 (304)
217 2j7t_A Serine/threonine-protei 99.1 1.5E-10 5.3E-15 114.0 8.2 83 470-554 24-107 (302)
218 3is5_A Calcium-dependent prote 99.1 3.3E-10 1.1E-14 110.8 10.5 83 470-554 27-111 (285)
219 3a8x_A Protein kinase C IOTA t 99.1 2.4E-10 8.1E-15 115.2 9.6 83 470-554 14-101 (345)
220 3uc3_A Serine/threonine-protei 99.1 1.5E-10 5.3E-15 117.3 8.0 82 470-554 25-107 (361)
221 2w4o_A Calcium/calmodulin-depe 99.1 1.3E-10 4.4E-15 117.4 7.3 81 470-554 58-139 (349)
222 4fr4_A YANK1, serine/threonine 99.1 1.5E-10 5E-15 118.3 7.6 83 470-554 20-106 (384)
223 3soc_A Activin receptor type-2 99.1 1.4E-10 4.8E-15 115.7 7.2 83 470-554 29-113 (322)
224 3t9t_A Tyrosine-protein kinase 99.1 3.7E-10 1.3E-14 109.1 10.0 82 470-554 13-94 (267)
225 2zv2_A Calcium/calmodulin-depe 99.1 1.7E-10 5.9E-15 113.6 7.7 85 470-554 18-129 (298)
226 2ivs_A Proto-oncogene tyrosine 99.1 2.5E-10 8.5E-15 113.1 8.9 83 470-554 28-117 (314)
227 3l9p_A Anaplastic lymphoma kin 99.1 2E-10 6.7E-15 116.9 8.2 83 470-554 76-165 (367)
228 3txo_A PKC-L, NPKC-ETA, protei 99.1 2E-10 6.8E-15 116.1 7.8 83 470-554 28-115 (353)
229 2rku_A Serine/threonine-protei 99.0 4.6E-10 1.6E-14 110.2 10.2 83 470-554 20-106 (294)
230 2vd5_A DMPK protein; serine/th 99.0 1.4E-10 4.7E-15 119.7 6.5 83 470-554 66-152 (412)
231 2a2a_A Death-associated protei 99.0 5.3E-10 1.8E-14 111.3 10.6 83 470-554 17-106 (321)
232 3lxp_A Non-receptor tyrosine-p 99.0 6.4E-10 2.2E-14 110.6 11.1 85 470-554 36-126 (318)
233 3bhy_A Death-associated protei 99.0 6.7E-10 2.3E-14 108.3 10.9 83 470-554 10-99 (283)
234 2pmi_A Negative RE, cyclin-dep 99.0 3.4E-10 1.1E-14 112.6 8.8 82 470-554 10-93 (317)
235 2ra8_A Uncharacterized protein 99.0 1.6E-10 5.5E-15 116.6 6.5 163 71-239 166-341 (362)
236 2buj_A Serine/threonine-protei 99.0 2.9E-10 1E-14 112.8 8.4 85 470-554 34-121 (317)
237 3dtc_A Mitogen-activated prote 99.0 2.2E-10 7.7E-15 110.9 7.3 82 470-554 12-97 (271)
238 3vhe_A Vascular endothelial gr 99.0 1.6E-10 5.4E-15 117.0 6.5 84 470-554 27-118 (359)
239 1rdq_E PKA C-alpha, CAMP-depen 99.0 2.7E-10 9.1E-15 115.0 8.0 83 470-554 46-132 (350)
240 2w5a_A Serine/threonine-protei 99.0 3.2E-10 1.1E-14 110.3 8.3 85 470-554 11-98 (279)
241 1x8b_A WEE1HU, WEE1-like prote 99.0 5.9E-10 2E-14 108.7 10.2 83 470-554 16-102 (289)
242 3soa_A Calcium/calmodulin-depe 99.0 3.8E-10 1.3E-14 117.6 9.2 83 470-554 16-101 (444)
243 1xjd_A Protein kinase C, theta 99.0 2.1E-10 7.2E-15 115.5 7.0 83 470-554 22-109 (345)
244 2w1i_A JAK2; chromosomal rearr 99.0 5.3E-10 1.8E-14 111.6 9.8 85 470-554 46-135 (326)
245 3eqc_A Dual specificity mitoge 99.0 4.3E-10 1.5E-14 113.9 9.1 83 470-554 38-122 (360)
246 2eva_A TAK1 kinase - TAB1 chim 99.0 2.8E-10 9.5E-15 112.7 7.4 78 470-554 13-90 (307)
247 3fdn_A Serine/threonine-protei 99.0 3.3E-10 1.1E-14 110.3 7.9 83 470-554 14-100 (279)
248 4e5w_A Tyrosine-protein kinase 99.0 7.6E-10 2.6E-14 109.0 10.5 85 470-554 26-116 (302)
249 4dc2_A Protein kinase C IOTA t 99.0 2.7E-10 9.1E-15 116.8 7.4 83 470-554 57-144 (396)
250 2owb_A Serine/threonine-protei 99.0 6.2E-10 2.1E-14 111.6 9.9 83 470-554 46-132 (335)
251 3kk8_A Calcium/calmodulin depe 99.0 5.2E-10 1.8E-14 109.1 9.2 83 470-554 11-96 (284)
252 2ozo_A Tyrosine-protein kinase 99.0 5.4E-10 1.8E-14 121.3 10.2 80 472-554 343-426 (613)
253 2wqm_A Serine/threonine-protei 99.0 8.1E-10 2.8E-14 109.3 10.5 83 470-554 37-123 (310)
254 1qpc_A LCK kinase; alpha beta 99.0 7.4E-10 2.5E-14 107.8 10.1 82 470-555 18-99 (279)
255 3niz_A Rhodanese family protei 99.0 3.8E-10 1.3E-14 111.9 8.1 82 470-554 26-109 (311)
256 3lij_A Calcium/calmodulin depe 99.0 5.4E-10 1.8E-14 118.3 9.8 83 470-554 42-127 (494)
257 1t46_A HOMO sapiens V-KIT hard 99.0 3.6E-10 1.2E-14 111.9 7.8 83 470-554 28-118 (313)
258 3kfa_A Tyrosine-protein kinase 99.0 2.6E-10 8.9E-15 111.5 6.7 82 470-554 18-100 (288)
259 3q5i_A Protein kinase; CDPK, m 99.0 7.4E-10 2.5E-14 117.6 10.6 83 470-554 41-137 (504)
260 2pvf_A Fibroblast growth facto 99.0 3.9E-10 1.3E-14 113.0 7.9 83 470-554 40-132 (334)
261 3a7i_A MST3 kinase, serine/thr 99.0 5.3E-10 1.8E-14 110.3 8.7 83 470-554 27-111 (303)
262 3ork_A Serine/threonine protei 99.0 1.6E-10 5.5E-15 114.6 4.8 85 470-554 17-107 (311)
263 1p4o_A Insulin-like growth fac 99.0 4.9E-10 1.7E-14 111.5 8.2 83 470-554 30-119 (322)
264 2yex_A Serine/threonine-protei 99.0 7.6E-10 2.6E-14 107.4 9.4 83 470-554 12-96 (276)
265 3cok_A Serine/threonine-protei 99.0 3.7E-10 1.3E-14 109.9 7.1 83 470-554 16-102 (278)
266 2acx_A G protein-coupled recep 99.0 5.7E-10 2E-14 119.1 9.1 83 470-554 189-275 (576)
267 1rjb_A FL cytokine receptor; k 99.0 4.5E-10 1.5E-14 112.9 7.9 83 470-554 50-140 (344)
268 2h6d_A 5'-AMP-activated protei 99.0 6.2E-10 2.1E-14 108.1 8.5 83 470-554 16-102 (276)
269 1ob3_A PFPK5, cell division co 99.0 5.5E-10 1.9E-14 109.4 8.1 82 470-554 7-90 (288)
270 2y94_A 5'-AMP-activated protei 99.0 4.7E-10 1.6E-14 117.8 8.0 83 470-554 21-107 (476)
271 3tt0_A Basic fibroblast growth 99.0 6.9E-10 2.4E-14 113.4 9.1 83 470-554 74-166 (382)
272 1phk_A Phosphorylase kinase; g 99.0 6.3E-10 2.2E-14 109.3 8.5 83 470-554 22-115 (298)
273 1t4h_A Serine/threonine-protei 99.0 9.1E-10 3.1E-14 107.8 9.6 85 470-554 31-120 (290)
274 3gxj_A TGF-beta receptor type- 99.0 5.8E-10 2E-14 109.8 8.1 81 470-554 8-92 (303)
275 4agu_A Cyclin-dependent kinase 99.0 5.7E-10 2E-14 110.4 8.1 83 470-554 8-93 (311)
276 4fl3_A Tyrosine-protein kinase 99.0 7.4E-10 2.5E-14 120.6 9.6 81 471-554 375-460 (635)
277 3nyv_A Calmodulin-domain prote 99.0 9.5E-10 3.3E-14 116.1 10.2 83 470-554 31-117 (484)
278 2vgo_A Serine/threonine-protei 99.0 5.8E-10 2E-14 108.9 7.8 83 470-554 19-105 (284)
279 2h34_A Serine/threonine-protei 99.0 6.1E-10 2.1E-14 110.3 8.0 83 470-554 39-125 (309)
280 2yfx_A Tyrosine-protein kinase 99.0 4.3E-10 1.5E-14 112.3 7.0 83 470-554 35-124 (327)
281 1u59_A Tyrosine-protein kinase 99.0 1.4E-09 4.7E-14 106.4 10.4 81 471-554 16-100 (287)
282 4ejn_A RAC-alpha serine/threon 99.0 2.3E-10 8E-15 119.5 5.0 83 470-554 153-239 (446)
283 1u5q_A Serine/threonine protei 99.0 8.7E-10 3E-14 111.2 9.1 82 470-554 59-144 (348)
284 3h4j_B AMPK kdaid, SNF1-like p 99.0 3.9E-10 1.3E-14 113.1 6.3 82 470-554 14-99 (336)
285 3i6u_A CDS1, serine/threonine- 99.0 6E-10 2.1E-14 115.3 8.0 82 470-554 140-230 (419)
286 3qup_A Tyrosine-protein kinase 99.0 6.2E-10 2.1E-14 110.8 7.7 85 470-554 28-122 (323)
287 2i1m_A Macrophage colony-stimu 99.0 6.9E-10 2.4E-14 111.0 8.0 83 470-554 51-141 (333)
288 3mwu_A Calmodulin-domain prote 99.0 9.1E-10 3.1E-14 116.4 9.3 83 470-554 27-112 (486)
289 3c4z_A Rhodopsin kinase; Ser/T 99.0 9E-10 3.1E-14 117.2 9.0 83 470-554 190-276 (543)
290 2pml_X PFPK7, Ser/Thr protein 99.0 2.8E-10 9.7E-15 114.6 4.8 81 470-553 36-133 (348)
291 2i0e_A Protein kinase C-beta I 99.0 5.4E-10 1.8E-14 112.9 6.7 83 470-554 25-112 (353)
292 3pls_A Macrophage-stimulating 99.0 1.2E-09 4E-14 107.4 8.9 84 470-554 26-114 (298)
293 1mqb_A Ephrin type-A receptor 99.0 1.2E-09 4.1E-14 109.4 9.0 83 470-554 49-137 (333)
294 1byg_A CSK, protein (C-termina 99.0 8.3E-10 2.8E-14 107.4 7.6 81 470-554 26-106 (278)
295 1fvr_A Tyrosine-protein kinase 99.0 7.8E-10 2.7E-14 110.4 7.5 83 470-554 30-117 (327)
296 3lm5_A Serine/threonine-protei 99.0 7.2E-10 2.5E-14 110.7 7.2 83 470-554 34-120 (327)
297 1mp8_A Focal adhesion kinase 1 99.0 1E-09 3.4E-14 107.1 8.1 82 470-554 20-106 (281)
298 3e7e_A HBUB1, BUB1A, mitotic c 99.0 9.4E-10 3.2E-14 111.7 8.2 80 470-554 70-158 (365)
299 2vwi_A Serine/threonine-protei 98.9 2.9E-10 1E-14 111.9 4.1 83 470-554 20-104 (303)
300 2ra8_A Uncharacterized protein 98.9 3.2E-10 1.1E-14 114.4 4.4 201 6-217 105-341 (362)
301 2r5t_A Serine/threonine-protei 98.9 5.7E-10 2E-14 113.5 6.3 83 470-554 43-130 (373)
302 1zy4_A Serine/threonine-protei 98.9 1.4E-09 4.8E-14 106.9 8.9 84 470-554 11-106 (303)
303 2eue_A Carbon catabolite derep 98.9 1.8E-09 6.2E-14 104.8 9.4 82 470-554 18-103 (275)
304 2y7j_A Phosphorylase B kinase 98.9 1.9E-09 6.5E-14 109.4 9.9 83 470-554 99-191 (365)
305 2qr7_A Ribosomal protein S6 ki 98.9 9.6E-10 3.3E-14 110.6 7.6 79 470-554 27-107 (342)
306 2wei_A Calmodulin-domain prote 98.9 2.6E-09 9E-14 104.4 10.5 83 470-554 27-112 (287)
307 3rgf_A Cyclin-dependent kinase 98.9 1.6E-09 5.6E-14 111.6 9.4 92 460-554 16-110 (405)
308 4aaa_A Cyclin-dependent kinase 98.9 7.6E-10 2.6E-14 110.7 6.6 82 470-553 30-114 (331)
309 3f66_A Hepatocyte growth facto 98.9 2E-09 6.9E-14 105.7 9.6 84 470-554 30-118 (298)
310 3com_A Serine/threonine-protei 98.9 1.6E-09 5.4E-14 107.4 8.7 81 470-554 34-115 (314)
311 3o0g_A Cell division protein k 98.9 1.2E-09 4.1E-14 107.1 7.8 80 470-552 7-89 (292)
312 4f0f_A Serine/threonine-protei 98.9 1E-09 3.4E-14 107.3 7.2 81 470-554 24-112 (287)
313 1xbb_A Tyrosine-protein kinase 98.9 2E-09 6.7E-14 105.5 9.3 80 472-554 24-108 (291)
314 2ycf_A Serine/threonine-protei 98.9 1.7E-09 6E-14 107.6 8.9 82 470-554 15-105 (322)
315 3poz_A Epidermal growth factor 98.9 1.5E-09 5.3E-14 108.3 8.4 82 470-554 20-107 (327)
316 3gbz_A Kinase, CMGC CDK; ssgci 98.9 8.8E-10 3E-14 110.2 6.5 82 470-554 39-123 (329)
317 2wtk_C Serine/threonine-protei 98.9 2.2E-09 7.6E-14 105.8 9.1 83 470-553 10-97 (305)
318 3q4u_A Activin receptor type-1 98.9 1.6E-09 5.4E-14 106.6 7.9 81 470-554 13-97 (301)
319 3c1x_A Hepatocyte growth facto 98.9 1.2E-09 4.1E-14 111.2 7.1 84 470-554 94-182 (373)
320 3cc6_A Protein tyrosine kinase 98.9 2.1E-09 7.1E-14 104.7 8.2 82 470-554 17-103 (281)
321 3nsz_A CK II alpha, casein kin 98.9 3.2E-09 1.1E-13 105.9 9.8 82 470-554 41-124 (330)
322 2i6l_A Mitogen-activated prote 98.9 2.1E-09 7.1E-14 106.6 8.2 84 470-554 16-112 (320)
323 2x7f_A TRAF2 and NCK-interacti 98.9 1.7E-09 5.8E-14 107.8 7.6 84 470-554 29-118 (326)
324 2a19_B Interferon-induced, dou 98.9 1.7E-09 5.9E-14 105.3 7.3 81 470-554 16-111 (284)
325 2xir_A Vascular endothelial gr 98.9 1.5E-09 5.3E-14 107.4 7.1 84 470-554 32-123 (316)
326 2vuw_A Serine/threonine-protei 98.9 3.7E-10 1.3E-14 113.3 2.0 82 470-554 25-153 (336)
327 1b6c_B TGF-B superfamily recep 98.9 5E-09 1.7E-13 105.0 10.1 81 470-554 47-131 (342)
328 3brb_A Proto-oncogene tyrosine 98.9 2.2E-09 7.5E-14 106.3 7.3 85 470-554 39-132 (313)
329 3p1a_A MYT1 kinase, membrane-a 98.9 4.8E-09 1.7E-13 103.9 9.7 82 470-554 62-147 (311)
330 1vzo_A Ribosomal protein S6 ki 98.9 9.5E-10 3.2E-14 111.2 4.5 83 470-554 59-150 (355)
331 3n9x_A Phosphotransferase; mal 98.9 2.9E-09 9.9E-14 110.7 7.9 84 470-554 31-120 (432)
332 2r3i_A Cell division protein k 98.9 2.7E-09 9.4E-14 104.8 7.4 82 470-554 8-92 (299)
333 3mtl_A Cell division protein k 98.9 8.5E-10 2.9E-14 110.0 3.7 82 470-554 7-90 (324)
334 1ua2_A CAK, cell division prot 98.9 2.5E-09 8.4E-14 107.7 7.0 82 470-554 15-102 (346)
335 1nxk_A MAP kinase-activated pr 98.9 3E-09 1E-13 109.4 7.8 79 471-554 68-150 (400)
336 3llt_A Serine/threonine kinase 98.8 4.4E-09 1.5E-13 106.4 8.6 81 470-554 40-126 (360)
337 3og7_A AKAP9-BRAF fusion prote 98.8 3.5E-09 1.2E-13 103.6 7.7 80 470-554 29-110 (289)
338 3oz6_A Mitogen-activated prote 98.8 3.2E-09 1.1E-13 108.7 7.6 84 470-554 14-101 (388)
339 3kex_A Receptor tyrosine-prote 98.8 1.5E-09 5.3E-14 108.2 5.1 82 470-554 18-105 (325)
340 3rp9_A Mitogen-activated prote 98.8 2.8E-09 9.7E-14 111.6 7.3 84 470-554 58-147 (458)
341 3ll6_A Cyclin G-associated kin 98.8 2.6E-09 8.8E-14 106.7 6.5 84 470-554 33-124 (337)
342 3lb7_A RAF proto-oncogene seri 98.8 3.5E-09 1.2E-13 104.7 7.4 80 470-554 41-122 (307)
343 3fme_A Dual specificity mitoge 98.8 7.1E-09 2.4E-13 101.2 9.1 82 470-554 12-96 (290)
344 2izr_A Casein kinase I isoform 98.8 2.1E-09 7.3E-14 107.4 5.4 80 470-554 14-95 (330)
345 3dls_A PAS domain-containing s 98.8 2E-09 6.9E-14 107.9 5.3 83 470-554 29-121 (335)
346 1cm8_A Phosphorylated MAP kina 98.8 2.7E-09 9.3E-14 108.4 6.3 84 470-554 30-120 (367)
347 3pg1_A Mitogen-activated prote 98.8 2.9E-09 9.7E-14 107.9 6.4 84 470-554 27-124 (362)
348 3dbq_A Dual specificity protei 98.8 4.3E-09 1.5E-13 105.8 7.6 82 470-554 14-99 (343)
349 3m2w_A MAP kinase-activated pr 98.8 6.1E-09 2.1E-13 102.5 8.4 79 471-554 24-106 (299)
350 3an0_A Dual specificity mitoge 98.8 9.2E-09 3.1E-13 103.1 9.8 82 470-554 56-140 (340)
351 3ttj_A Mitogen-activated prote 98.8 3.8E-09 1.3E-13 110.7 7.0 83 470-553 67-156 (464)
352 2zmd_A Dual specificity protei 98.8 8.8E-09 3E-13 105.5 9.3 82 470-554 61-146 (390)
353 3byv_A Rhoptry kinase; malaria 98.8 1.8E-09 6.1E-14 110.2 4.0 84 470-554 78-190 (377)
354 3mdy_A Bone morphogenetic prot 98.8 1E-08 3.5E-13 102.4 9.6 81 470-554 42-126 (337)
355 2j0j_A Focal adhesion kinase 1 98.8 9E-09 3.1E-13 112.5 9.7 82 470-554 395-481 (656)
356 3lzb_A Epidermal growth factor 98.8 7.2E-09 2.5E-13 103.4 8.0 82 470-554 20-107 (327)
357 2b9h_A MAP kinase FUS3, mitoge 98.8 6.8E-09 2.3E-13 104.6 7.9 84 470-554 16-104 (353)
358 3eb0_A Putative uncharacterize 98.8 5.7E-09 1.9E-13 106.6 7.0 59 470-532 12-71 (383)
359 3aln_A Dual specificity mitoge 98.8 8.6E-09 2.9E-13 102.7 8.2 82 470-554 27-111 (327)
360 1u46_A ACK-1, activated CDC42 98.8 5.4E-09 1.8E-13 102.2 6.5 82 470-554 23-111 (291)
361 3qyz_A Mitogen-activated prote 98.8 8.5E-09 2.9E-13 104.5 8.1 84 470-554 32-120 (364)
362 2xrw_A Mitogen-activated prote 98.8 1.3E-08 4.3E-13 103.6 9.4 84 470-554 30-120 (371)
363 2pzi_A Probable serine/threoni 98.8 3.5E-09 1.2E-13 116.6 5.2 85 470-554 85-175 (681)
364 3pfq_A PKC-B, PKC-beta, protei 98.8 5.3E-09 1.8E-13 114.7 6.0 83 470-554 346-433 (674)
365 4exu_A Mitogen-activated prote 98.8 1.4E-08 4.8E-13 103.2 8.8 84 470-554 47-137 (371)
366 4fs7_A Uncharacterized protein 98.8 1.1E-07 3.7E-12 97.5 15.5 192 29-238 162-376 (394)
367 3qa8_A MGC80376 protein; kinas 98.8 1.7E-09 5.9E-14 116.9 2.0 83 470-554 19-109 (676)
368 3coi_A Mitogen-activated prote 98.7 1.6E-08 5.4E-13 102.0 8.8 84 470-554 29-119 (353)
369 2fst_X Mitogen-activated prote 98.7 6E-09 2.1E-13 105.8 5.7 84 470-554 34-124 (367)
370 3mi9_A Cell division protein k 98.7 8.5E-09 2.9E-13 103.9 6.6 83 470-553 22-113 (351)
371 2rio_A Serine/threonine-protei 98.7 1.2E-08 4E-13 106.1 7.4 79 470-554 20-99 (434)
372 3g2f_A Bone morphogenetic prot 98.7 1.3E-08 4.4E-13 101.8 7.3 81 470-554 18-103 (336)
373 2iwi_A Serine/threonine-protei 98.7 3.3E-09 1.1E-13 105.0 2.8 83 470-554 36-130 (312)
374 2y4i_B KSR2, HKSR2, kinase sup 98.7 2.8E-09 9.6E-14 105.8 2.1 82 470-555 38-121 (319)
375 3en9_A Glycoprotease, O-sialog 98.7 1.5E-08 5E-13 108.2 7.4 83 470-555 341-431 (540)
376 1csn_A Casein kinase-1; phosph 98.7 1.4E-08 4.7E-13 99.6 6.8 80 470-554 15-96 (298)
377 2jii_A Serine/threonine-protei 98.7 5.6E-09 1.9E-13 105.3 3.9 77 470-554 47-148 (352)
378 2v62_A Serine/threonine-protei 98.7 9.2E-09 3.1E-13 103.5 5.1 82 470-554 42-142 (345)
379 3g33_A Cell division protein k 98.7 1.5E-08 5E-13 100.1 6.4 84 470-554 14-109 (308)
380 3fhr_A MAP kinase-activated pr 98.7 3.4E-08 1.2E-12 98.9 8.7 81 470-554 34-117 (336)
381 3cek_A Dual specificity protei 98.7 3.3E-08 1.1E-12 97.8 8.5 82 470-554 33-118 (313)
382 3op5_A Serine/threonine-protei 98.7 1.4E-08 4.8E-13 102.9 5.9 84 470-554 40-142 (364)
383 3p23_A Serine/threonine-protei 98.7 1.8E-08 6.1E-13 104.6 6.0 79 470-554 29-108 (432)
384 1blx_A Cyclin-dependent kinase 98.6 1.7E-08 5.7E-13 100.5 5.4 84 470-554 16-109 (326)
385 2dyl_A Dual specificity mitoge 98.6 4.7E-08 1.6E-12 96.8 8.3 79 470-551 30-111 (318)
386 3q60_A ROP5B; pseudokinase, tr 98.6 5.6E-08 1.9E-12 98.7 8.8 83 470-554 67-178 (371)
387 3kvw_A DYRK2, dual specificity 98.6 4.6E-08 1.6E-12 101.4 7.7 81 470-554 102-189 (429)
388 1wak_A Serine/threonine-protei 98.6 3.1E-08 1.1E-12 101.3 6.0 83 470-554 42-135 (397)
389 1j1b_A Glycogen synthase kinas 98.6 7.5E-08 2.6E-12 99.5 8.9 78 470-552 59-141 (420)
390 4gt6_A Cell surface protein; l 98.6 7.9E-07 2.7E-11 91.0 15.9 220 9-236 65-342 (394)
391 3e3p_A Protein kinase, putativ 98.6 3.7E-08 1.2E-12 99.5 5.7 78 470-548 28-111 (360)
392 4gt6_A Cell surface protein; l 98.6 7.8E-07 2.7E-11 91.0 15.7 108 119-239 259-368 (394)
393 3uzp_A CKI-delta, CKID, casein 98.6 7E-08 2.4E-12 94.4 7.3 81 470-554 14-95 (296)
394 1z57_A Dual specificity protei 98.6 4.1E-08 1.4E-12 97.9 5.6 81 470-554 19-107 (339)
395 1io0_A Tropomodulin; LRR prote 98.5 6.1E-09 2.1E-13 94.8 -0.9 41 179-219 118-164 (185)
396 3a99_A Proto-oncogene serine/t 98.5 2.7E-08 9.1E-13 98.9 2.8 83 470-554 48-140 (320)
397 1io0_A Tropomodulin; LRR prote 98.5 2.1E-08 7.3E-13 91.2 1.6 118 49-171 32-164 (185)
398 4e7w_A Glycogen synthase kinas 98.5 8.5E-08 2.9E-12 98.2 6.2 77 470-550 45-125 (394)
399 1q8y_A SR protein kinase; tran 98.5 5.5E-08 1.9E-12 98.6 4.4 83 470-554 24-120 (373)
400 1zar_A RIO2 kinase; serine kin 98.5 1.6E-07 5.3E-12 91.6 7.4 77 470-552 95-189 (282)
401 4hgt_A Casein kinase I isoform 98.5 1.2E-07 4E-12 92.8 6.5 81 470-554 14-95 (296)
402 3sv0_A Casein kinase I-like; t 98.5 2.6E-07 9E-12 97.0 8.9 80 470-554 12-93 (483)
403 4fs7_A Uncharacterized protein 98.5 9.2E-07 3.2E-11 90.5 12.9 193 5-216 159-376 (394)
404 2vx3_A Dual specificity tyrosi 98.4 2.1E-07 7.1E-12 94.9 6.7 81 470-554 59-146 (382)
405 4h09_A Hypothetical leucine ri 98.4 1.1E-05 3.8E-10 81.8 18.4 77 158-236 240-318 (379)
406 2eu9_A Dual specificity protei 98.4 2.9E-07 9.8E-12 92.5 5.9 81 470-554 24-112 (355)
407 3rw6_A Nuclear RNA export fact 98.3 1.1E-07 3.7E-12 91.1 0.4 30 183-212 221-257 (267)
408 3rw6_A Nuclear RNA export fact 98.3 1E-07 3.4E-12 91.3 0.1 76 157-234 169-257 (267)
409 4azs_A Methyltransferase WBDD; 98.3 5E-07 1.7E-11 96.9 5.5 81 472-554 241-333 (569)
410 4h09_A Hypothetical leucine ri 98.0 3.7E-05 1.3E-09 77.9 12.3 154 51-219 192-345 (379)
411 1zth_A RIO1 serine protein kin 97.9 1E-05 3.5E-10 77.5 5.4 71 470-546 52-151 (258)
412 3e4g_A ATP synthase subunit S, 97.8 6.2E-06 2.1E-10 73.3 2.8 82 54-135 62-149 (176)
413 3e4g_A ATP synthase subunit S, 97.7 8.6E-06 2.9E-10 72.4 1.5 60 158-217 85-150 (176)
414 1pgv_A TMD-1, tropomodulin TMD 97.7 1.5E-05 5.1E-10 72.2 2.7 83 53-135 41-136 (197)
415 4gyi_A RIO2 kinase; protein ki 97.7 1.3E-05 4.6E-10 80.6 2.5 80 470-553 100-201 (397)
416 3dzo_A Rhoptry kinase domain; 97.6 4.9E-05 1.7E-09 78.1 5.9 51 470-520 83-137 (413)
417 1pgv_A TMD-1, tropomodulin TMD 97.5 2.2E-05 7.5E-10 71.1 1.5 64 75-138 39-111 (197)
418 3rfe_A Platelet glycoprotein I 97.2 0.00081 2.8E-08 56.7 7.1 54 12-65 12-67 (130)
419 3d1u_A Putative fructosamine-3 97.0 0.0012 4.2E-08 64.0 7.6 75 470-550 20-97 (288)
420 3tm0_A Aminoglycoside 3'-phosp 96.8 0.0019 6.6E-08 61.4 6.7 80 471-553 20-100 (263)
421 3rfe_A Platelet glycoprotein I 96.8 0.0026 9E-08 53.5 6.7 55 33-90 12-68 (130)
422 1nd4_A Aminoglycoside 3'-phosp 96.2 0.0047 1.6E-07 58.3 5.8 73 474-551 29-103 (264)
423 3f7w_A Putative fructosamine-3 94.0 0.094 3.2E-06 50.3 7.1 75 470-550 20-97 (288)
424 3dxp_A Putative acyl-COA dehyd 93.9 0.056 1.9E-06 53.7 5.5 80 471-551 44-129 (359)
425 2olc_A MTR kinase, methylthior 90.0 0.45 1.5E-05 47.8 6.7 75 470-548 35-120 (397)
426 3jr1_A Putative fructosamine-3 90.0 0.73 2.5E-05 44.7 7.9 74 471-550 42-118 (312)
427 4gkh_A Aminoglycoside 3'-phosp 87.4 1.3 4.4E-05 41.6 7.6 75 473-552 32-109 (272)
428 3ovc_A Hygromycin-B 4-O-kinase 85.2 2.2 7.5E-05 42.2 8.2 74 470-551 46-122 (362)
429 2jwa_A Receptor tyrosine-prote 84.3 0.47 1.6E-05 30.7 1.8 10 310-319 29-38 (44)
430 3r70_A Aminoglycoside phosphot 83.7 1.6 5.5E-05 42.2 6.4 70 470-551 42-115 (320)
431 3tdw_A Gentamicin resistance p 80.5 3.4 0.00012 39.6 7.3 74 471-552 25-102 (306)
432 2k1k_A Ephrin type-A receptor 80.0 0.59 2E-05 29.4 1.0 21 295-315 14-34 (38)
433 3ats_A Putative uncharacterize 79.3 0.79 2.7E-05 45.2 2.3 81 471-551 26-121 (357)
434 3cxl_A N-chimerin; SH2, RHO-GA 79.3 0.17 5.9E-06 52.2 -2.6 59 470-531 147-214 (463)
435 3sg8_A APH(2'')-ID; antibiotic 68.7 3.7 0.00013 39.2 4.1 77 470-552 25-105 (304)
436 2q83_A YTAA protein; 2635576, 64.8 7.3 0.00025 37.5 5.4 72 472-550 39-118 (346)
437 2lz0_A Uncharacterized protein 60.0 17 0.0006 28.1 5.7 45 65-110 8-52 (100)
438 2lz0_A Uncharacterized protein 56.6 23 0.00077 27.5 5.8 50 38-88 5-54 (100)
439 2pyw_A Uncharacterized protein 48.9 26 0.00088 35.0 6.4 72 471-547 40-122 (420)
440 2ks1_B Epidermal growth factor 43.7 25 0.00086 22.7 3.4 26 297-322 13-38 (44)
441 2jwa_A Receptor tyrosine-prote 43.1 20 0.00069 23.1 2.8 19 305-323 21-39 (44)
442 1zyl_A Hypothetical protein YI 41.1 47 0.0016 31.5 6.7 75 472-550 33-114 (328)
443 2l2t_A Receptor tyrosine-prote 39.7 24 0.00084 22.7 2.8 26 297-322 12-37 (44)
444 2k9y_A Ephrin type-A receptor 33.4 14 0.00047 23.3 0.9 9 298-306 16-24 (41)
445 2ppq_A HSK, HK, homoserine kin 29.2 30 0.001 32.8 3.0 75 471-550 28-110 (322)
446 1nw1_A Choline kinase (49.2 KD 25.3 77 0.0026 31.7 5.4 72 471-550 79-159 (429)
447 3feg_A Choline/ethanolamine ki 20.8 76 0.0026 31.2 4.2 73 471-550 56-137 (379)
448 3i1a_A Spectinomycin phosphotr 20.4 1.7E+02 0.0059 27.8 6.7 68 474-550 32-108 (339)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.2e-34 Score=319.19 Aligned_cols=266 Identities=36% Similarity=0.518 Sum_probs=229.4
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.++++|++|+|++|++++.+|.. +++|++|+|++|.+++..+..+..+++|+.|+|++|.+++.+|..+..+++|++
T Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 46778888888888888777754 567888888888888888887888888999999999998888888999999999
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc---------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL--------- 152 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~--------- 152 (555)
|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|.++|.+|..+.......
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 99999999988999999999999999999999888899999999999999999999988887664421110
Q ss_pred ----------------------------------------------------ccCCCCCcCEEEccCCcCCCcCCccccC
Q 048796 153 ----------------------------------------------------VLPSYPPMESLDLSGNALTGVLPSDIGN 180 (555)
Q Consensus 153 ----------------------------------------------------~l~~~~~L~~L~Ls~N~l~~~~p~~~~~ 180 (555)
.+..+++|+.|+|++|+++|.+|..|+.
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 1334578999999999999999999999
Q ss_pred ccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCcc--ccCCCCCCC
Q 048796 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPEN--LRNFPKSSF 256 (555)
Q Consensus 181 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~--l~~~~~~~~ 256 (555)
++.|+.|+|++|.++|.+|..++.+++|+.|||++|+++|.+|..+. .+|+.||+++|+++|.+|.. +..++...|
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~ 734 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKF 734 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHh
Confidence 99999999999999999999999999999999999999999999887 78999999999999999975 667776666
Q ss_pred CCCCcccccCCCCCC
Q 048796 257 HPGNALLIFPDGVPS 271 (555)
Q Consensus 257 ~~~n~~~~~~~~~~~ 271 (555)
. ||+.+|+++..+|
T Consensus 735 ~-gN~~Lcg~~l~~C 748 (768)
T 3rgz_A 735 L-NNPGLCGYPLPRC 748 (768)
T ss_dssp C-SCTEEESTTSCCC
T ss_pred c-CCchhcCCCCcCC
Confidence 5 9999998654333
No 2
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=2.6e-32 Score=273.18 Aligned_cols=248 Identities=29% Similarity=0.441 Sum_probs=223.0
Q ss_pred CCCCEEECCCCcCCC--CCCCC---CCCCCEEEcCC-CcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 8 TTLSVLNLSSNSLSG--TLPTS---LKSCVILDLSR-NMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~--~~~~~---l~~L~~L~L~~-N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.+++.|+|++|++++ .+|.. +++|++|+|++ |++.+..+..+..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 479999999999998 77754 67899999995 9999888888899999999999999999999999999999999
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCC-CCCeEEccCCcccccCCcCccccccccccCCCCCc
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPM 160 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L 160 (555)
|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+..+. +|+.|+|++|.+++.+|..+..+ . |
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l---------~-L 199 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL---------N-L 199 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC---------C-C
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC---------c-c
Confidence 99999999999999999999999999999999989999999998 99999999999999999887766 5 9
Q ss_pred CEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccC
Q 048796 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYN 238 (555)
Q Consensus 161 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N 238 (555)
++|+|++|.+++..|..|..+++|+.|+|++|.+++.++. +..+++|++|+|++|.|++.+|..+. ++|+.|++++|
T Consensus 200 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred cEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 9999999999999999999999999999999999976665 88899999999999999999998887 79999999999
Q ss_pred CCCCCcCcc--ccCCCCCCCCCCCcccccCC
Q 048796 239 DLSGPIPEN--LRNFPKSSFHPGNALLIFPD 267 (555)
Q Consensus 239 ~l~~~~p~~--l~~~~~~~~~~~n~~~~~~~ 267 (555)
+++|.+|.. +..+....+ .+|+.+|.++
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l-~~N~~lc~~p 308 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAY-ANNKCLCGSP 308 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGT-CSSSEEESTT
T ss_pred cccccCCCCccccccChHHh-cCCCCccCCC
Confidence 999999975 222332333 3788888753
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=3e-30 Score=289.24 Aligned_cols=239 Identities=33% Similarity=0.470 Sum_probs=169.6
Q ss_pred CCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 7 STTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
+++|++|+|++|++++.+|.. +++|++|+|++|++++..+..+..+++|+.|+|++|.+++.+|..+..+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 445666666666666555543 34566666666666666666666666666666666666666666666666677777
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
|++|++++.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|+|++|.+++.+|..+..+ ++|+.|
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l---------~~L~~L 543 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC---------RSLIWL 543 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGC---------TTCCEE
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCC---------CCCCEE
Confidence 77777666666666666777777777777766666666667777777777777766666666555 778888
Q ss_pred EccCCcCCCcCCccc-----------------------------------------------------------------
Q 048796 164 DLSGNALTGVLPSDI----------------------------------------------------------------- 178 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~----------------------------------------------------------------- 178 (555)
+|++|.+++.+|..+
T Consensus 544 ~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~ 623 (768)
T 3rgz_A 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623 (768)
T ss_dssp ECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEE
T ss_pred ECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceeccc
Confidence 888888776666433
Q ss_pred -----cCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCC
Q 048796 179 -----GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 179 -----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
..+++|+.|||++|+++|.+|..++.+++|+.|+|++|+++|.+|..+. .+|+.||+++|+++|.+|..+..+
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 2346677888888888888888888888888888888888888888777 678888888888888888877666
Q ss_pred CCC
Q 048796 252 PKS 254 (555)
Q Consensus 252 ~~~ 254 (555)
+..
T Consensus 704 ~~L 706 (768)
T 3rgz_A 704 TML 706 (768)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 4
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=2.1e-30 Score=259.39 Aligned_cols=228 Identities=29% Similarity=0.400 Sum_probs=209.4
Q ss_pred CcCCCCCCEEECCC-CcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCc
Q 048796 4 GINSTTLSVLNLSS-NSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRL 79 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~-N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L 79 (555)
..++++|++|+|++ |++++.+|.. +++|++|+|++|++++..+..+..+++|++|+|++|.+++.+|..+..+++|
T Consensus 72 l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 151 (313)
T 1ogq_A 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred HhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCC
Confidence 35688999999995 9999888864 6789999999999998888888889999999999999999999999999999
Q ss_pred cEEEeeCCcCCCCCchhccCCC-CccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 80 STFNIRNNSVTGTLPSLLEISP-RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 80 ~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
++|+|++|.+++.+|..+..++ +|+.|+|++|++++.+|..+..+. |+.|+|++|.+++..|..+..+ +
T Consensus 152 ~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l---------~ 221 (313)
T 1ogq_A 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSD---------K 221 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTT---------S
T ss_pred CeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcC---------C
Confidence 9999999999999999999998 999999999999989999999987 9999999999998888777766 9
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEecc
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSY 237 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~ 237 (555)
+|+.|+|++|.+++.+|. +..+++|++|+|++|.|++.+|..+..+++|+.|+|++|++++.+|.... ++|+.+++++
T Consensus 222 ~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~ 300 (313)
T 1ogq_A 222 NTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYAN 300 (313)
T ss_dssp CCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCS
T ss_pred CCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcC
Confidence 999999999999977665 88899999999999999999999999999999999999999999988643 7899999999
Q ss_pred CC-CCC
Q 048796 238 ND-LSG 242 (555)
Q Consensus 238 N~-l~~ 242 (555)
|+ ++|
T Consensus 301 N~~lc~ 306 (313)
T 1ogq_A 301 NKCLCG 306 (313)
T ss_dssp SSEEES
T ss_pred CCCccC
Confidence 98 555
No 5
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4e-28 Score=239.42 Aligned_cols=226 Identities=21% Similarity=0.163 Sum_probs=203.7
Q ss_pred CCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 10 LSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
-++++++++.++. +|. ..++|++|+|++|+|+++.+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.
T Consensus 13 ~~~~~c~~~~l~~-ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 13 KVTTSCPQQGLQA-VPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp SCEEECCSSCCSS-CCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred CeEEEcCcCCccc-CCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 3689999999985 454 45689999999999999888888889999999999999998889999999999999999997
Q ss_pred -CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 89 -VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 89 -l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
++...+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++|+|++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~l~~ 162 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL---------GNLTHLFLHG 162 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCS
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC---------CCccEEECCC
Confidence 887778899999999999999999998888889999999999999999997766656655 8999999999
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
|.+++..+..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++..+..+. ++|+.|++++|++.|.++
T Consensus 163 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 163 NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 999988777899999999999999999998899999999999999999999976666565 789999999999998765
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=4.3e-28 Score=255.44 Aligned_cols=247 Identities=19% Similarity=0.189 Sum_probs=192.0
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCC-CcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGD-ISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++|++|+|++|.|++..|.. +++|++|+|++|.+.+. .+..+..+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 56888888888888765643 56778888888888643 356677778888888888888877788888888888888
Q ss_pred eeCCcCCCCCchh--ccCCCCccEEEcCCCcCCCCCchh-hhCCCCCCeEEccCCcccccCCcCcccc------------
Q 048796 84 IRNNSVTGTLPSL--LEISPRLVTLDVSSNQLKGPIPDN-FFSSMALTNLNLSGNGFSGAIPLRSSHA------------ 148 (555)
Q Consensus 84 L~~N~l~~~~~~~--l~~l~~L~~L~L~~N~l~~~~~~~-~~~~~~L~~L~Ls~N~l~~~~p~~~~~~------------ 148 (555)
|++|.+++..+.. +..+++|++|+|++|++++..|.. +..+++|+.|++++|.+.+..+..+..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 8888887654443 778888888888888888766665 6778888888888888877666555432
Q ss_pred ----------------------ccccccC---------------------------------------------------
Q 048796 149 ----------------------SELLVLP--------------------------------------------------- 155 (555)
Q Consensus 149 ----------------------~~l~~l~--------------------------------------------------- 155 (555)
..+..+.
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 0010000
Q ss_pred ---CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCC
Q 048796 156 ---SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKL 230 (555)
Q Consensus 156 ---~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L 230 (555)
..++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..+. ++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 125789999999999988888899999999999999999988888888999999999999999877777665 789
Q ss_pred CEEEeccCCCCCCcCccccCCCCC
Q 048796 231 NEFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 231 ~~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
+.|++++|.+++..|..+..++..
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTC
T ss_pred CEEECCCCcccccChhhccccccc
Confidence 999999999988888777666554
No 7
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=4.3e-28 Score=255.45 Aligned_cols=251 Identities=21% Similarity=0.231 Sum_probs=169.5
Q ss_pred cCCCCCCEEECCCCcCCCCCC----CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCcc--ccCCCC
Q 048796 5 INSTTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNL--TSQFDR 78 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~--~~~l~~ 78 (555)
.++++|++|+|++|.+.+.++ ..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+.. +..+++
T Consensus 51 ~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~ 130 (455)
T 3v47_A 51 SRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTS 130 (455)
T ss_dssp SSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTT
T ss_pred ccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCccc
Confidence 345666666666666654332 23455666666666666555555555566666666666665433322 555666
Q ss_pred ccEEEeeCCcCCCCCchh-ccCCCCccEEEcCCCcCCCCCchhhhC----------------------------------
Q 048796 79 LSTFNIRNNSVTGTLPSL-LEISPRLVTLDVSSNQLKGPIPDNFFS---------------------------------- 123 (555)
Q Consensus 79 L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~---------------------------------- 123 (555)
|++|+|++|.+++..|.. +..+++|++|+|++|++++..+..+..
T Consensus 131 L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~ 210 (455)
T 3v47_A 131 LEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFK 210 (455)
T ss_dssp CCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTT
T ss_pred CCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccc
Confidence 666666666666554443 555566666666666555443332221
Q ss_pred ---------------------------------------------------------------CCCCCeEEccCCccccc
Q 048796 124 ---------------------------------------------------------------SMALTNLNLSGNGFSGA 140 (555)
Q Consensus 124 ---------------------------------------------------------------~~~L~~L~Ls~N~l~~~ 140 (555)
..+|+.|++++|.+.+.
T Consensus 211 ~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 290 (455)
T 3v47_A 211 NTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFAL 290 (455)
T ss_dssp TCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEE
T ss_pred cceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccccc
Confidence 13567777777777766
Q ss_pred CCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 141 IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 141 ~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
.|..+..+ ++|++|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|++|+|++|++++
T Consensus 291 ~~~~~~~l---------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 291 LKSVFSHF---------TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp CTTTTTTC---------TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred chhhcccC---------CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 77666665 889999999999998888889999999999999999988888889999999999999999998
Q ss_pred CCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCC--CCCCCcccc
Q 048796 221 EIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSS--FHPGNALLI 264 (555)
Q Consensus 221 ~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~--~~~~n~~~~ 264 (555)
..|..+. ++|+.|++++|++++..+..+..++... ...+|+..|
T Consensus 362 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 362 LGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 8787776 7899999999999876665555555432 122555544
No 8
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=4.8e-28 Score=256.75 Aligned_cols=245 Identities=22% Similarity=0.157 Sum_probs=152.6
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
.++++|++|+|++|.+++..|.. +++|++|+|++|+|+.++...+..+++|++|+|++|.+++..+..|..+++|++
T Consensus 53 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 53 ASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCE
Confidence 34566677777777666555543 345667777777776666666666666777777777776666666677777777
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccC------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLP------ 155 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~------ 155 (555)
|+|++|.+.+..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+..+..+..+..+..+.
T Consensus 133 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 212 (477)
T 2id5_A 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212 (477)
T ss_dssp EEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT
T ss_pred EECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc
Confidence 77777777666666677777777777777777655555666777777777777777666555555443222111
Q ss_pred ---------CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhh
Q 048796 156 ---------SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKL 226 (555)
Q Consensus 156 ---------~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 226 (555)
...+|++|+|++|.+++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..+
T Consensus 213 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (477)
T 2id5_A 213 LDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAF 292 (477)
T ss_dssp CCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTB
T ss_pred ccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHh
Confidence 11255666666666664444455666666666666666665555556666666666666666665555554
Q ss_pred h--cCCCEEEeccCCCCCCcCcccc
Q 048796 227 S--LKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 227 ~--~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
. ++|+.|++++|.+++..+..+.
T Consensus 293 ~~l~~L~~L~L~~N~l~~~~~~~~~ 317 (477)
T 2id5_A 293 RGLNYLRVLNVSGNQLTTLEESVFH 317 (477)
T ss_dssp TTCTTCCEEECCSSCCSCCCGGGBS
T ss_pred cCcccCCEEECCCCcCceeCHhHcC
Confidence 4 5666666666666654444443
No 9
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=6.1e-28 Score=238.14 Aligned_cols=235 Identities=26% Similarity=0.269 Sum_probs=207.5
Q ss_pred CCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCc-CCCCCCccccCCCCccEE
Q 048796 7 STTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK-LSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L 82 (555)
.++|++|+|++|++++..+. .+++|++|+|++|.++++.+..+..+++|++|+|++|. ++...+..+..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 46899999999999976654 45789999999999998888888899999999999998 887778899999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
+|++|.+++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~ 181 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGL---------HSLDR 181 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTC---------TTCCE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCc---------cccCE
Confidence 999999998888999999999999999999997777778999999999999999997666666655 89999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLS 241 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~ 241 (555)
|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+....+.... ..++.+..+.|.+.
T Consensus 182 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~ 261 (285)
T 1ozn_A 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP 261 (285)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCB
T ss_pred EECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccc
Confidence 99999999999999999999999999999999988878899999999999999999976554322 44556667889999
Q ss_pred CCcCccccC
Q 048796 242 GPIPENLRN 250 (555)
Q Consensus 242 ~~~p~~l~~ 250 (555)
|..|..+.+
T Consensus 262 c~~p~~l~g 270 (285)
T 1ozn_A 262 CSLPQRLAG 270 (285)
T ss_dssp EEESGGGTT
T ss_pred cCCchHhCC
Confidence 999887654
No 10
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3e-27 Score=248.88 Aligned_cols=231 Identities=19% Similarity=0.184 Sum_probs=135.1
Q ss_pred CCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 10 LSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
...++.+++.++ .+|..+ +++++|+|++|+|+++.+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcC-ccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 355666666665 344333 356666666666666655666666666666666666665555666666666666666666
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCCcCEEEccC
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
|+...+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|...+.++ ..+..+ ++|++|+|++
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l---------~~L~~L~L~~ 205 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGL---------FNLKYLNLGM 205 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC---------TTCCEEECTT
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCC---------CCCCEEECCC
Confidence 665555556666666666666666664444456666666666666633222222 223333 5666666666
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
|.+++. | .+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|++++..+..+. ++|+.|++++|+|++..+
T Consensus 206 n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 283 (452)
T 3zyi_A 206 CNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH 283 (452)
T ss_dssp SCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred Cccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh
Confidence 666643 2 355566666666666666665566666666666666666666655555444 556666666666665444
Q ss_pred ccccCCC
Q 048796 246 ENLRNFP 252 (555)
Q Consensus 246 ~~l~~~~ 252 (555)
..+..++
T Consensus 284 ~~~~~l~ 290 (452)
T 3zyi_A 284 DLFTPLR 290 (452)
T ss_dssp TSSTTCT
T ss_pred HHhcccc
Confidence 4444333
No 11
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.2e-27 Score=238.56 Aligned_cols=230 Identities=23% Similarity=0.254 Sum_probs=139.1
Q ss_pred CEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC--CCccccCCCCccEEEeeCC
Q 048796 11 SVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS--LPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N 87 (555)
+.++++++.++ .+|.. .++|++|+|++|+++.++...+..+++|++|+|++|.++.. .+..+..+++|++|+|++|
T Consensus 10 ~~l~c~~~~l~-~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp TEEECCSSCCS-SCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred CEEEcCCCCcc-cCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 45666666665 33333 34666666666666655555566666666666666666522 2444555666666666666
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
.+. .++..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.+..+..+..+ ++|++|+|+
T Consensus 89 ~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~l~ 158 (306)
T 2z66_A 89 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL---------SSLEVLKMA 158 (306)
T ss_dssp SEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC---------TTCCEEECT
T ss_pred ccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC---------cCCCEEECC
Confidence 666 344456666666666666666654333 355666666666666666665555544444 666666666
Q ss_pred CCcCCC-cCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCC
Q 048796 167 GNALTG-VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 167 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~ 243 (555)
+|.+++ ..|..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++..+..+. ++|+.|++++|++++.
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 238 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 238 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBC
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCccc
Confidence 666665 4555666666666666666666665566666666666666666666655444443 5666666666666666
Q ss_pred cCccccCC
Q 048796 244 IPENLRNF 251 (555)
Q Consensus 244 ~p~~l~~~ 251 (555)
.|..+..+
T Consensus 239 ~~~~~~~~ 246 (306)
T 2z66_A 239 KKQELQHF 246 (306)
T ss_dssp SSSSCCCC
T ss_pred CHHHHHhh
Confidence 66555444
No 12
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=2.9e-27 Score=238.01 Aligned_cols=221 Identities=23% Similarity=0.294 Sum_probs=154.5
Q ss_pred CCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 7 STTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
..+++.|+|++|+|+ .+|.. +++|++|+|++|.|+ ..+..+..+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356777777777776 44543 556777777777777 44455566667777777777777 6677777777777777
Q ss_pred eeCCcCCCCCchhccC---------CCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccccc
Q 048796 84 IRNNSVTGTLPSLLEI---------SPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL 154 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~---------l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l 154 (555)
|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+..+++|+.|+|++|.+++ +|..+..+
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l------ 228 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHL------ 228 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGC------
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccC------
Confidence 7777766666665543 777777777777776 666677777777777777777764 34344444
Q ss_pred CCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCE
Q 048796 155 PSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNE 232 (555)
Q Consensus 155 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~ 232 (555)
++|++|+|++|.+.+.+|..|..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..+. ++++.
T Consensus 229 ---~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~ 305 (328)
T 4fcg_A 229 ---PKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCI 305 (328)
T ss_dssp ---TTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCE
T ss_pred ---CCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceE
Confidence 6777777777777777777777777777777777777777777777777777777777777777777666 66777
Q ss_pred EEeccCCCC
Q 048796 233 FNVSYNDLS 241 (555)
Q Consensus 233 L~ls~N~l~ 241 (555)
+++..|.+.
T Consensus 306 l~l~~~~~~ 314 (328)
T 4fcg_A 306 ILVPPHLQA 314 (328)
T ss_dssp EECCGGGSC
T ss_pred EeCCHHHHH
Confidence 777665554
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=271.13 Aligned_cols=250 Identities=22% Similarity=0.242 Sum_probs=190.6
Q ss_pred CCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.+++|+.|+|++|.+++..+. .+++|+.|+|++|+|++..+..+..+++|++|+|++|.+++..+..|..+++|++|
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 357899999999999876664 45688899999999998888888888899999999999988888899999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc----------------------------------------hhhh
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP----------------------------------------DNFF 122 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~----------------------------------------~~~~ 122 (555)
+|++|.+....+..|..+++|+.|+|++|.+++... ..+.
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~ 423 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLL 423 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHT
T ss_pred ECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhh
Confidence 999999988888888889999999999998874211 0112
Q ss_pred CCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCC-----CcCCccccCccccceeecccccccCC
Q 048796 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT-----GVLPSDIGNMGRLRLLNLANNHLSGK 197 (555)
Q Consensus 123 ~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~ 197 (555)
.+++|+.|+|++|.+++..+... +..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|.|++.
T Consensus 424 ~l~~L~~L~Ls~N~l~~~~~~~~--------~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 495 (844)
T 3j0a_A 424 RVPHLQILILNQNRFSSCSGDQT--------PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSL 495 (844)
T ss_dssp TCTTCCEEEEESCCCCCCCSSSS--------SCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTC
T ss_pred cCCccceeeCCCCcccccccccc--------cccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCccccc
Confidence 34444444444444443222110 112366677777777765 33445688889999999999999998
Q ss_pred CchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCccccCCCCCCCCCCCcccc
Q 048796 198 MPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLI 264 (555)
Q Consensus 198 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~l~~~~~~~~~~~n~~~~ 264 (555)
.|..|.++++|+.|+|++|+|++..+..+.++|+.|++++|++++..|..+..+....+. +|+..|
T Consensus 496 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~-~Np~~C 561 (844)
T 3j0a_A 496 PPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDIT-HNKFIC 561 (844)
T ss_dssp CTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEE-EECCCC
T ss_pred ChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEec-CCCccc
Confidence 888899999999999999999987777666899999999999999998877654433332 566555
No 14
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.7e-27 Score=245.86 Aligned_cols=224 Identities=24% Similarity=0.251 Sum_probs=101.8
Q ss_pred CCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 9 TLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
+|+.|+|++|+|++..+.. +++|++|+|++|+|+.+.+..|..+++|++|+|++|.|+...+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 3444444444444333222 2344444444444444444444444444444444444443333344444444444444
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCc-CCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQ-LKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
+|.|+...+..|..+++|+.|+|++|+ +....+..|..+++|+.|+|++|.++. +|. + ..+++|+.|+
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~-~---------~~l~~L~~L~ 213 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN-L---------TPLIKLDELD 213 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCC-C---------TTCSSCCEEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccc-c---------CCCcccCEEE
Confidence 444444444444444444444444422 221222234444444555554444442 121 1 1224455555
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
|++|.|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. ++|+.|++++|++.|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 555555544444555555555555555555544444455555555555555555533333332 445555555555544
Q ss_pred C
Q 048796 243 P 243 (555)
Q Consensus 243 ~ 243 (555)
.
T Consensus 294 d 294 (440)
T 3zyj_A 294 N 294 (440)
T ss_dssp S
T ss_pred C
Confidence 3
No 15
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=6.6e-27 Score=241.39 Aligned_cols=235 Identities=20% Similarity=0.193 Sum_probs=148.6
Q ss_pred cCCCCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLST 81 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 81 (555)
..+++|+.|++++|.++...+ ..+++|++|+|++|.++++.+..+..+++|++|+|++|.+++..+..|..+++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 445667777777777663322 23566777777777776666666666667777777777777666666677777777
Q ss_pred EEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc---------
Q 048796 82 FNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL--------- 152 (555)
Q Consensus 82 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~--------- 152 (555)
|+|++|.++...+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+++.....+..+..+.
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc
Confidence 77777777755445566677777777777777655566666677777777777766643222222211100
Q ss_pred -------------------ccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 153 -------------------VLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 153 -------------------~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
.....++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..|..+..+++|+.|+|
T Consensus 202 ~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 279 (390)
T ss_dssp ECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEEC
Confidence 001124566666666666643 45667777777777777777666777777777777777
Q ss_pred CCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 214 SGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 214 s~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
++|++++. |..+. ++|+.|++++|+++.
T Consensus 280 ~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 280 SNNRLVAL-NLYGQPIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp CSSCCCEE-ECSSSCCTTCCEEECCSSCCCC
T ss_pred CCCcCccc-CcccCCCCCCCEEECCCCccee
Confidence 77777743 22222 567777777777763
No 16
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.95 E-value=5.3e-27 Score=248.69 Aligned_cols=242 Identities=21% Similarity=0.160 Sum_probs=208.6
Q ss_pred CcCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCcc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLS 80 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 80 (555)
..++++|++|+|++|+|+...+. .+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..|.++++|+
T Consensus 76 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 155 (477)
T 2id5_A 76 FNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLE 155 (477)
T ss_dssp TTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCC
T ss_pred hhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCC
Confidence 35788999999999999965544 467899999999999988888889999999999999999988888999999999
Q ss_pred EEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccc---------
Q 048796 81 TFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASEL--------- 151 (555)
Q Consensus 81 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l--------- 151 (555)
+|+|++|++++..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.++........+
T Consensus 156 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 156 QLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp EEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred EEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCc
Confidence 99999999998877889999999999999999987777788888888888888877666555433221111
Q ss_pred ------cccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChh
Q 048796 152 ------LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225 (555)
Q Consensus 152 ------~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 225 (555)
..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..
T Consensus 236 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp CCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred ccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 12446799999999999999988889999999999999999999999999999999999999999999766665
Q ss_pred hh--cCCCEEEeccCCCCCCcC
Q 048796 226 LS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 226 ~~--~~L~~L~ls~N~l~~~~p 245 (555)
+. ++|+.|++++|++.|.++
T Consensus 316 ~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 316 FHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp BSCGGGCCEEECCSSCEECSGG
T ss_pred cCCCcccCEEEccCCCccCccc
Confidence 55 789999999999998765
No 17
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=6.1e-27 Score=255.06 Aligned_cols=256 Identities=19% Similarity=0.227 Sum_probs=142.3
Q ss_pred CCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.+.+++.|++++|.++...+. .+++|++|+|++|.|++..+..+..+++|+.|+|++|.|++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 344555555555555432221 24455555555555555554455555555555555555555555555555555555
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccc-------------
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHAS------------- 149 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~------------- 149 (555)
+|++|.|++..+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|.+++.....+..+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccccc
Confidence 5555555544444445555555555555555544444555555555555555555443222111111
Q ss_pred -------------------------------------cccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccc
Q 048796 150 -------------------------------------ELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192 (555)
Q Consensus 150 -------------------------------------~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (555)
....+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 288 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 288 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTS
T ss_pred CCchhheeeccCCcccccccccCCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCC
Confidence 1112334567777777777777777777777777777777777
Q ss_pred cccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCCCCCCCcccc
Q 048796 193 HLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLI 264 (555)
Q Consensus 193 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~~~~~n~~~~ 264 (555)
.+++ +|..+..+++|+.|+|++|.++ .+|..+. ++|+.|++++|.+++..+..+..+..... .+|++.|
T Consensus 289 ~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l-~~N~~~~ 359 (597)
T 3oja_B 289 RLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTL-SHNDWDC 359 (597)
T ss_dssp CCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEEC-CSSCEEH
T ss_pred CCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEe-eCCCCCC
Confidence 7774 4555666777777777777777 4554444 67777777777777653333332222222 2555544
No 18
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.7e-26 Score=241.55 Aligned_cols=227 Identities=22% Similarity=0.241 Sum_probs=201.9
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|+|++..+.. +++|++|+|++|+|+++.+..+..+++|++|+|++|.|+...+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 58999999999999876654 568899999999999988889999999999999999999888888999999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCC-cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSN-QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
++|.|+...+..|..+++|+.|+|++| .+....+..|..+++|+.|+|++|.+++. | .+ ..+++|+.|
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~---------~~l~~L~~L 223 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NL---------TPLVGLEEL 223 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CC---------TTCTTCCEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cc---------cccccccEE
Confidence 999999877788999999999999985 45433445688999999999999999854 3 23 334899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
+|++|.|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. ++|+.|++++|++.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999977666655 78999999999998
Q ss_pred CCcC
Q 048796 242 GPIP 245 (555)
Q Consensus 242 ~~~p 245 (555)
|.+.
T Consensus 304 CdC~ 307 (452)
T 3zyi_A 304 CDCD 307 (452)
T ss_dssp CSTT
T ss_pred CCCC
Confidence 8764
No 19
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=8.3e-27 Score=234.66 Aligned_cols=213 Identities=19% Similarity=0.263 Sum_probs=193.8
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
..+++.|+|++|+|+.++..++ .+++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~~lp~~l~-~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQFPDQAF-RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCSSCCSCGG-GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCchhcChhhh-hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 4689999999999997665554 4788999999999999 88999999999999999999999 7788999999999999
Q ss_pred cCCCcCCCCCchhhhC---------CCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccc
Q 048796 108 VSSNQLKGPIPDNFFS---------SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI 178 (555)
Q Consensus 108 L~~N~l~~~~~~~~~~---------~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~ 178 (555)
|++|++.+.+|..+.. +++|+.|+|++|.++ .+|..+..+ ++|++|+|++|.+++ +|..+
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l---------~~L~~L~L~~N~l~~-l~~~l 225 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANL---------QNLKSLKIRNSPLSA-LGPAI 225 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGC---------TTCCEEEEESSCCCC-CCGGG
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCC---------CCCCEEEccCCCCCc-Cchhh
Confidence 9999888889887765 999999999999998 777777666 899999999999996 56679
Q ss_pred cCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCC
Q 048796 179 GNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 179 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
..+++|+.|+|++|.+.+.+|..+..+++|++|+|++|.+.+.+|..+. ++|+.|++++|++.+.+|..+..++..
T Consensus 226 ~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L 303 (328)
T 4fcg_A 226 HHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303 (328)
T ss_dssp GGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT
T ss_pred ccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc
Confidence 9999999999999999999999999999999999999999999998877 899999999999999999998877654
No 20
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.4e-26 Score=239.95 Aligned_cols=245 Identities=20% Similarity=0.158 Sum_probs=210.4
Q ss_pred CCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
....++.++++++ .+|.. .++++.|+|++|+|+.+.+..+..+++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcC-cCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4678999999998 55655 468999999999999988888999999999999999999888889999999999999999
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccC-CcCccccccccccCCCCCcCEEEcc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAI-PLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
+|+...+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|...+.+ +..+..+ ++|++|+|+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l---------~~L~~L~L~ 193 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL---------SNLRYLNLA 193 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC---------SSCCEEECT
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc---------cccCeecCC
Confidence 999887788999999999999999999777778999999999999995443343 3345544 999999999
Q ss_pred CCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCc
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~ 244 (555)
+|.++.. | .+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..+. ++|+.|++++|++++..
T Consensus 194 ~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 194 MCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 271 (440)
T ss_dssp TSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCC
T ss_pred CCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccC
Confidence 9999954 4 588999999999999999998899999999999999999999988887776 79999999999999877
Q ss_pred CccccCCCCCC--CCCCCccccc
Q 048796 245 PENLRNFPKSS--FHPGNALLIF 265 (555)
Q Consensus 245 p~~l~~~~~~~--~~~~n~~~~~ 265 (555)
+..+..++... ...+|++.|.
T Consensus 272 ~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 272 HDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTTTSSCTTCCEEECCSSCEECS
T ss_pred hhHhccccCCCEEEcCCCCccCC
Confidence 76666655432 1236766553
No 21
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=9.9e-27 Score=231.88 Aligned_cols=228 Identities=23% Similarity=0.260 Sum_probs=200.8
Q ss_pred CCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCC--cccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 8 TTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDI--SDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++|++|+|++|+++...+ ..+++|++|+|++|+++... +..+..+++|++|+|++|.++ .++..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 589999999999995444 34678999999999998543 344456788999999999998 567778999999999
Q ss_pred EeeCCcCCCCCc-hhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc-cCCcCccccccccccCCCCCc
Q 048796 83 NIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG-AIPLRSSHASELLVLPSYPPM 160 (555)
Q Consensus 83 ~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~-~~p~~~~~~~~l~~l~~~~~L 160 (555)
+|++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|+.|+|++|.+.+ ..|..+..+ ++|
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---------~~L 177 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL---------RNL 177 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC---------TTC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhC---------cCC
Confidence 999999997665 678999999999999999998888889999999999999999987 567666665 899
Q ss_pred CEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh---cCCCEEEecc
Q 048796 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSY 237 (555)
Q Consensus 161 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~ 237 (555)
++|+|++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|+.||+++|++++..|..+. .+|+.|++++
T Consensus 178 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~ 257 (306)
T 2z66_A 178 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 257 (306)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTT
T ss_pred CEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccC
Confidence 9999999999998899999999999999999999988888899999999999999999998887765 3899999999
Q ss_pred CCCCCCcC
Q 048796 238 NDLSGPIP 245 (555)
Q Consensus 238 N~l~~~~p 245 (555)
|+++|.++
T Consensus 258 N~~~~~c~ 265 (306)
T 2z66_A 258 NDFACTCE 265 (306)
T ss_dssp CCEECSGG
T ss_pred CCeecccC
Confidence 99998653
No 22
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.94 E-value=8.5e-26 Score=227.64 Aligned_cols=217 Identities=22% Similarity=0.239 Sum_probs=130.3
Q ss_pred CCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
+|+.++++++.++ .+|.. .++|++|+|++|+|++..+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCeEEEecCCCcc-ccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 6777788777777 34443 356777888888777776666777777888888888777766777777777888888777
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc--cCCcCccccccccccCCCCCcCEEEc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG--AIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~--~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
.++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.+.. ..+..+..+ ++|++|++
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l---------~~L~~L~l 178 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM---------KKLSYIRI 178 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGC---------TTCCEEEC
T ss_pred cCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCC---------CCcCEEEC
Confidence 777 3343332 567777777777776666667777777777777777753 344444444 44444555
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
++|.++. +|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+. ++|+.|++++|.++
T Consensus 179 ~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 179 ADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp CSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred CCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 5544442 222221 3444444444444444444444444444444444444443333333 34444444444444
No 23
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.94 E-value=2.5e-26 Score=250.98 Aligned_cols=251 Identities=23% Similarity=0.227 Sum_probs=204.4
Q ss_pred CcCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCC-cccccCCCCccEEEccCCcCCCCC--CccccCCC
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDI-SDMQNWEANLEILDLSSNKLSGSL--PNLTSQFD 77 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~~~--~~~~~~l~ 77 (555)
..++++|++|++++|.+++..|. .+++|++|++++|.+.+.. ...+..+++|++|+|++|.+++.. +..+..++
T Consensus 297 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~ 376 (606)
T 3t6q_A 297 LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLS 376 (606)
T ss_dssp CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCT
T ss_pred hcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCC
Confidence 35678999999999999976553 4678999999999988544 456788889999999999998655 77888999
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCch-hhhCCCCCCeEEccCCcccccCCcCccccccccccCC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPD-NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPS 156 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~ 156 (555)
+|++|++++|.+.+..+..+..+++|+.|++++|++.+..+. .+..+++|+.|++++|.+.+..|..+..+
T Consensus 377 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------- 448 (606)
T 3t6q_A 377 HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGL-------- 448 (606)
T ss_dssp TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTC--------
T ss_pred CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCC--------
Confidence 999999999999988888899999999999999999876554 47889999999999999988877777666
Q ss_pred CCCcCEEEccCCcCCCc---CCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCC
Q 048796 157 YPPMESLDLSGNALTGV---LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLN 231 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~ 231 (555)
++|++|+|++|.+++. .+..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..+. ..|
T Consensus 449 -~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L- 526 (606)
T 3t6q_A 449 -PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI- 526 (606)
T ss_dssp -TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-
T ss_pred -CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-
Confidence 8889999999988762 335688888999999999999888888888899999999999999888887776 677
Q ss_pred EEEeccCCCCCCcCccccCCCCCC--CCCCCcccc
Q 048796 232 EFNVSYNDLSGPIPENLRNFPKSS--FHPGNALLI 264 (555)
Q Consensus 232 ~L~ls~N~l~~~~p~~l~~~~~~~--~~~~n~~~~ 264 (555)
.|++++|++++..|..+..++... ...+|+..|
T Consensus 527 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 899999999887776654433321 123676655
No 24
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.94 E-value=9.4e-26 Score=227.53 Aligned_cols=235 Identities=23% Similarity=0.246 Sum_probs=178.9
Q ss_pred CCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
+|+.+++++|.++ .+|.. .++|++|+|++|+|++..+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred cCCEEECCCCCcc-ccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 6899999999988 45544 468899999999998887777888888999999999998877888899999999999999
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc--cCCcCccccccccccC----------
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG--AIPLRSSHASELLVLP---------- 155 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~--~~p~~~~~~~~l~~l~---------- 155 (555)
.++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|.++. ..+..+..+ .+..+.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIP 188 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccC
Confidence 988 4444443 789999999999986666678888999999999998853 445544433 111110
Q ss_pred --CCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCC
Q 048796 156 --SYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLN 231 (555)
Q Consensus 156 --~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~ 231 (555)
-.++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++ .+|..+. ++|+
T Consensus 189 ~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~ 267 (332)
T 2ft3_A 189 KDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQ 267 (332)
T ss_dssp SSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCC
T ss_pred ccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCC
Confidence 1146778888888888777777788888888888888888777667777888888888888887 5665555 6788
Q ss_pred EEEeccCCCCCCcCcccc
Q 048796 232 EFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 232 ~L~ls~N~l~~~~p~~l~ 249 (555)
.|++++|++++..+..+.
T Consensus 268 ~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 268 VVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp EEECCSSCCCBCCTTSSS
T ss_pred EEECCCCCCCccChhHcc
Confidence 888888888765554443
No 25
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.94 E-value=2.2e-26 Score=251.38 Aligned_cols=241 Identities=21% Similarity=0.172 Sum_probs=213.2
Q ss_pred CcCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCc-cccCCCCc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPN-LTSQFDRL 79 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~-~~~~l~~L 79 (555)
..++++|++|+|++|+++ .+|.. +++|++|+|++|.+++..+..+..+++|+.|+|++|.+.+.++. .+..+++|
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred hccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 346789999999999998 56654 56899999999999988888888899999999999999866654 58999999
Q ss_pred cEEEeeCCcCCCCC--chhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcC-ccccccccccCC
Q 048796 80 STFNIRNNSVTGTL--PSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLR-SSHASELLVLPS 156 (555)
Q Consensus 80 ~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~~~~l~~l~~ 156 (555)
++|++++|.+++.. +..+..+++|++|++++|++.+..+..+..+++|+.|++++|.+.+..+.. +..+
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l-------- 424 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL-------- 424 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTC--------
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCc--------
Confidence 99999999998765 778999999999999999999888899999999999999999998776543 5544
Q ss_pred CCCcCEEEccCCcCCCcCCccccCccccceeecccccccCC---CchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCC
Q 048796 157 YPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGK---MPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLN 231 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~ 231 (555)
++|++|++++|.+++..|..+..+++|+.|+|++|.+++. .+..+..+++|+.|++++|.+++..|..+. ++|+
T Consensus 425 -~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 425 -HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp -TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred -ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 8999999999999999999999999999999999999862 336788999999999999999988888776 8999
Q ss_pred EEEeccCCCCCCcCccccCCCCC
Q 048796 232 EFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 232 ~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
.|++++|++++..|..+..++..
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L 526 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI 526 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC
T ss_pred EEECCCCccCcCChhHhCccccc
Confidence 99999999999999888766544
No 26
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=4.3e-27 Score=239.49 Aligned_cols=205 Identities=19% Similarity=0.166 Sum_probs=132.7
Q ss_pred CCCCCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
.|......++++|+++ .+|.. .++|++|+|++|+|+++.+..+..+++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeEeeCCCCCcc-cccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3455556677777776 34433 346777777777777666656666677777777777777666666777777777777
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCC-cccccCCcCccccccccccCCCCCcCE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGN-GFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N-~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++|.+++..+..+..+++|++|+|++|+++...+ ..+..+++|+.|++++| .+....+..+..+ ++|++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l---------~~L~~ 178 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL---------TFLEE 178 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC---------CEEEE
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCC---------CCCCE
Confidence 7777775555556777777777777777763322 35666777777777777 3554444445444 66677
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
|++++|.+++..|..|..+++|+.|++++|.++......+..+++|+.|++++|.+++
T Consensus 179 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 179 LEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp EEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTT
T ss_pred EECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccc
Confidence 7777777776666666666667777777666653333333445666666666666665
No 27
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.94 E-value=4.7e-26 Score=234.99 Aligned_cols=253 Identities=20% Similarity=0.174 Sum_probs=191.5
Q ss_pred CCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++++|++|+|++|.+++..+. .+++|++|+|++|.+++..+..+..+++|++|+|++|.++...+..|..+++|++|
T Consensus 67 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 67 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 146 (390)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEE
Confidence 568899999999999876554 46688999999999998888888888899999999999996666667899999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCC-------------------CeEEccCCcccccCCc
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL-------------------TNLNLSGNGFSGAIPL 143 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L-------------------~~L~Ls~N~l~~~~p~ 143 (555)
+|++|.+++..+..+..+++|++|++++|++++.. +..+++| +.|++++|.+......
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~ 223 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 223 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeecccc
Confidence 99999999888888999999999999999987542 2333333 3344444433322111
Q ss_pred Ccccc----------ccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 144 RSSHA----------SELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 144 ~~~~~----------~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
....+ .....+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++ ++..+..+++|+.|++
T Consensus 224 ~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp CCSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 11111 112234456899999999999999889999999999999999999985 5667788999999999
Q ss_pred CCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCCCCCCCcccc
Q 048796 214 SGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSSFHPGNALLI 264 (555)
Q Consensus 214 s~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~~~~~n~~~~ 264 (555)
++|+++ .+|..+. ++|+.|++++|+++......+..+..... .+|+..|
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l-~~N~~~~ 353 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTL-SHNDWDC 353 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEEC-CSSCEEH
T ss_pred CCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEc-CCCCccc
Confidence 999999 4555554 89999999999998654333333332223 2676655
No 28
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=6.2e-26 Score=222.63 Aligned_cols=224 Identities=21% Similarity=0.166 Sum_probs=195.1
Q ss_pred CEEECCCCcCCCCCCCCCC-CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 11 SVLNLSSNSLSGTLPTSLK-SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
..++..+.+++ .+|..++ +|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|.+
T Consensus 10 ~~~~c~~~~l~-~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp TEEECTTSCCS-SCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred ceEEecCCCcc-ccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 45777888887 5666554 699999999999988887888889999999999999988888899999999999999999
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccccc-CCcCccccccccccCCCCCcCEEEccCC
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGA-IPLRSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
++..+..+..+++|++|++++|++.+..+..+..+++|+.|++++|.+++. +|..+..+ ++|++|+|++|
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l---------~~L~~L~Ls~N 159 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL---------TNLEHLDLSSN 159 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGC---------TTCCEEECCSS
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccC---------CCCCEEECCCC
Confidence 988888999999999999999999977776899999999999999999864 47767666 89999999999
Q ss_pred cCCCcCCccccCccccc----eeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 169 ALTGVLPSDIGNMGRLR----LLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 169 ~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
.+++..+..|..+.+|+ .|++++|.+++..+..+.. .+|+.|++++|.+++..+..+. ++|+.|++++|++.|
T Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 160 KIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 99988888888888887 8999999999766655554 5899999999999976665554 789999999999998
Q ss_pred CcC
Q 048796 243 PIP 245 (555)
Q Consensus 243 ~~p 245 (555)
.+|
T Consensus 239 ~c~ 241 (276)
T 2z62_A 239 SCP 241 (276)
T ss_dssp CTT
T ss_pred cCC
Confidence 876
No 29
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.94 E-value=1.4e-25 Score=225.96 Aligned_cols=226 Identities=23% Similarity=0.295 Sum_probs=199.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|+|++..+. .+++|++|+|++|+++++.+..+..+++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 5899999999999976654 4678999999999999988888999999999999999998 4555443 79999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCC--CCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKG--PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++|.+++..+..+..+++|+.|++++|.+.. ..+..+..+++|+.|++++|.++. +|..+. ++|++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~-----------~~L~~ 196 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP-----------PSLTE 196 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC-----------TTCSE
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc-----------ccCCE
Confidence 9999998888889999999999999999963 667889999999999999999984 443221 78999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDL 240 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l 240 (555)
|+|++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.++ .+|..+. ++|+.|++++|++
T Consensus 197 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 197 LHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 999999999988999999999999999999999888888999999999999999999 6776665 7899999999999
Q ss_pred CCCcCcccc
Q 048796 241 SGPIPENLR 249 (555)
Q Consensus 241 ~~~~p~~l~ 249 (555)
++..+..+.
T Consensus 276 ~~~~~~~f~ 284 (330)
T 1xku_A 276 SAIGSNDFC 284 (330)
T ss_dssp CCCCTTSSS
T ss_pred CccChhhcC
Confidence 987766654
No 30
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.2e-26 Score=248.45 Aligned_cols=247 Identities=20% Similarity=0.169 Sum_probs=177.7
Q ss_pred CCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++++|++|+|++|.|++..+.. +++|++|+|++|.|++.++..+..+++|+.|+|++|.|++..+..|..+++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 4567777777777777655433 4566777777777777666666666777777777777775555556777777777
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCC---------------------------------------------
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPI--------------------------------------------- 117 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--------------------------------------------- 117 (555)
+|++|.+++..|..|..+++|+.|+|++|.+++..
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~ 232 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNV 232 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCS
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCC
Confidence 77777777666666777777777777777665321
Q ss_pred --------------chhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccc
Q 048796 118 --------------PDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183 (555)
Q Consensus 118 --------------~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 183 (555)
+..+..+++|+.|+|++|.+.+..|..+..+ ++|+.|+|++|.+++ +|..+..+++
T Consensus 233 ~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~-l~~~~~~l~~ 302 (597)
T 3oja_B 233 ELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKM---------QRLERLYISNNRLVA-LNLYGQPIPT 302 (597)
T ss_dssp CCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTC---------SSCCEEECTTSCCCE-EECSSSCCTT
T ss_pred CCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCc---------cCCCEEECCCCCCCC-CCcccccCCC
Confidence 1235556677777777777777666666555 999999999999996 4667788999
Q ss_pred cceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCc-cccCCCCCCCCCCCcc
Q 048796 184 LRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPE-NLRNFPKSSFHPGNAL 262 (555)
Q Consensus 184 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~-~l~~~~~~~~~~~n~~ 262 (555)
|+.|+|++|.++ .+|..+..+++|+.|+|++|.|++..+ ...++|+.|++++|+++|.... ++..+....+. ++..
T Consensus 303 L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~-~~~~ 379 (597)
T 3oja_B 303 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL-STHHTLKNLTLSHNDWDCNSLRALFRNVARPAVD-DADQ 379 (597)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC-CTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBC-CCCC
T ss_pred CcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh-hhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccc-cccc
Confidence 999999999999 578888899999999999999996543 3337999999999999986543 34444444332 4444
Q ss_pred ccc
Q 048796 263 LIF 265 (555)
Q Consensus 263 ~~~ 265 (555)
.|.
T Consensus 380 ~C~ 382 (597)
T 3oja_B 380 HCK 382 (597)
T ss_dssp CCC
T ss_pred cCC
Confidence 443
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=1.5e-25 Score=245.70 Aligned_cols=133 Identities=22% Similarity=0.190 Sum_probs=106.0
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
+++++|||++|+|++..+.. +++|++|+|++|+|+++.++.|..+++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36888888888888665544 567788888888888888888888888888888888888766677888888888888
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCC-CCchhhhCCCCCCeEEccCCccccc
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKG-PIPDNFFSSMALTNLNLSGNGFSGA 140 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~ 140 (555)
++|+|++..+..|+.+++|++|+|++|.+++ ..|..+..+++|+.|+|++|.+++.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 8888887777778888888888888888865 3567777788888888888877643
No 32
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.94 E-value=1.4e-25 Score=226.31 Aligned_cols=239 Identities=22% Similarity=0.249 Sum_probs=181.8
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..+. .+++|++|+|++|+|++..+..+..+++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 5788999999988866554 3567888999999988887778888888999999999888 4554443 78888888
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCC--CCCchhhhCCCCCCeEEccCCcccccCCcCccccccc-----------
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLK--GPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASEL----------- 151 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l----------- 151 (555)
++|.++...+..+..+++|+.|++++|.++ +..+..+..+ +|+.|++++|.+++........+..+
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 888888777777888888888888888885 2455566555 66666666666654221111111111
Q ss_pred -cccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh---
Q 048796 152 -LVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--- 227 (555)
Q Consensus 152 -~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--- 227 (555)
..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..+.
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 12345689999999999999988889999999999999999999 6888899999999999999999976655443
Q ss_pred -----cCCCEEEeccCCCC--CCcCccccCC
Q 048796 228 -----LKLNEFNVSYNDLS--GPIPENLRNF 251 (555)
Q Consensus 228 -----~~L~~L~ls~N~l~--~~~p~~l~~~ 251 (555)
..++.|++++|++. +..|..+..+
T Consensus 289 ~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l 319 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVPYWEVQPATFRCV 319 (332)
T ss_dssp CCSSSCCBSEEECCSSSSCGGGSCGGGGTTB
T ss_pred cccccccccceEeecCcccccccCccccccc
Confidence 45789999999997 4444444443
No 33
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=6.2e-25 Score=214.81 Aligned_cols=201 Identities=24% Similarity=0.284 Sum_probs=109.5
Q ss_pred CCCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
+++.+++++++++. +|..+ ++|++|+|++|+|+.+.+..+..+++|++|+|++|.++...+..|..+++|++|+|++|
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n 95 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDN 95 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSS
T ss_pred CCCEEEccCCCCCc-cCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCC
Confidence 35566666666663 44333 35666666666666555555555566666666666666444445556666666666666
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
.+++..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+..+..+ ++|++|+|++
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---------~~L~~L~L~~ 166 (270)
T 2o6q_A 96 KLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL---------TSLKELRLYN 166 (270)
T ss_dssp CCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCS
T ss_pred cCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC---------cccceeEecC
Confidence 6665555555556666666666666655444455555555555555555554333333333 4555555555
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
|.+++..+..|..+++|+.|+|++|.|++..+..+..+++|+.|+|++|.+.
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 167 NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 5555444444555555555555555555443344444455555555555444
No 34
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=1.5e-26 Score=226.49 Aligned_cols=229 Identities=20% Similarity=0.201 Sum_probs=197.5
Q ss_pred CCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 7 STTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
+.++..+++..+.+..... ..+++|+.|++++|.++... .+..+++|++|+|++|.+++. ..+..+++|++|+|+
T Consensus 18 ~~~l~~l~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHHHTCSCTTSEECHHHHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHHHhcCcccccccccccccceeeeeeCCCCccccc--ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 3455667777777775444 35789999999999998653 356678999999999999853 478899999999999
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
+|.+++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|+.|+|
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---------~~L~~L~l 164 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL---------TNLTELDL 164 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEEC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccC---------ccCCEEEC
Confidence 999998888889999999999999999997777778999999999999999997777666665 89999999
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcC
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p 245 (555)
++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+..| .++.++++.|.++|.+|
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWINKHSGVVR 239 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-----TTHHHHHHHHHTGGGBB
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-----HHHHHHHHHHhCCCccc
Confidence 9999998888888999999999999999999888889999999999999999997655 57888999999999999
Q ss_pred ccccCCCC
Q 048796 246 ENLRNFPK 253 (555)
Q Consensus 246 ~~l~~~~~ 253 (555)
.++.....
T Consensus 240 ~~~~~~~~ 247 (272)
T 3rfs_A 240 NSAGSVAP 247 (272)
T ss_dssp CTTSCBCG
T ss_pred CcccccCC
Confidence 88766543
No 35
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.93 E-value=1.1e-26 Score=254.77 Aligned_cols=233 Identities=20% Similarity=0.338 Sum_probs=201.5
Q ss_pred CCcCC---CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcC-----------------------------------
Q 048796 3 HGINS---TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMI----------------------------------- 41 (555)
Q Consensus 3 ~~~n~---~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l----------------------------------- 41 (555)
.|+.| .+++.|+|++|+++|.+|.. +++|++|+|++|.+
T Consensus 73 ~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~ 152 (636)
T 4eco_A 73 PGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDY 152 (636)
T ss_dssp TTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCC
T ss_pred CCeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhcc
Confidence 34455 47899999999999988864 66788999998854
Q ss_pred -------------------------------------------CCCCcccccCCCCccEEEccCCcCCCC----------
Q 048796 42 -------------------------------------------SGDISDMQNWEANLEILDLSSNKLSGS---------- 68 (555)
Q Consensus 42 -------------------------------------------~~~~~~~~~~~~~L~~L~Ls~N~l~~~---------- 68 (555)
++ ++..+..+++|++|+|++|.+++.
T Consensus 153 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 153 DPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp CGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred CchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 23 345577788999999999999975
Q ss_pred -------CCcccc--CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc-CCC-CCchhhhCC------CCCCeEE
Q 048796 69 -------LPNLTS--QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ-LKG-PIPDNFFSS------MALTNLN 131 (555)
Q Consensus 69 -------~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~~------~~L~~L~ 131 (555)
+|..++ ++++|++|+|++|.+.+.+|..+..+++|++|+|++|+ +++ .+|..++.+ ++|+.|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 898888 99999999999999999999999999999999999998 887 788888876 8999999
Q ss_pred ccCCcccccCCc--CccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCC-C
Q 048796 132 LSGNGFSGAIPL--RSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA-L 208 (555)
Q Consensus 132 Ls~N~l~~~~p~--~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L 208 (555)
|++|.++ .+|. .++.+ ++|++|+|++|.++|.+| .|..+++|+.|+|++|.++ .+|..+..+++ |
T Consensus 312 L~~n~l~-~ip~~~~l~~l---------~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L 379 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKM---------KKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQV 379 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTC---------TTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTC
T ss_pred CCCCcCC-ccCchhhhccC---------CCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccC
Confidence 9999998 7776 66666 899999999999998888 8999999999999999999 78888999999 9
Q ss_pred CEEeCCCCcCCCCCChhhh----cCCCEEEeccCCCCCCcCcccc
Q 048796 209 EYLDLSGNQFKGEIPDKLS----LKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 209 ~~L~Ls~N~l~~~~p~~~~----~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
++|++++|.++ .+|..+. .+|+.|++++|.+++.+|..+.
T Consensus 380 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 380 ENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp CEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred cEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 99999999999 7777655 2799999999999998887765
No 36
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.93 E-value=2.5e-25 Score=246.30 Aligned_cols=234 Identities=23% Similarity=0.250 Sum_probs=134.5
Q ss_pred cCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCc----------------------------CCCCCcccccCCC
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNM----------------------------ISGDISDMQNWEA 53 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~----------------------------l~~~~~~~~~~~~ 53 (555)
.++++|++|++++|.+++..+.. +++|++|+|++|. ++++.+..+..++
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 405 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLG 405 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCC
Confidence 35677888888888887665543 3455566665554 3333334444444
Q ss_pred CccEEEccCCcCCCCCC-ccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCC--CCCchhhhCCCCCCeE
Q 048796 54 NLEILDLSSNKLSGSLP-NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLK--GPIPDNFFSSMALTNL 130 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L 130 (555)
+|+.|+|++|.+++.++ ..+.++++|++|+|++|++.+..+..+..+++|+.|++++|.+. +..|..+..+++|+.|
T Consensus 406 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L 485 (680)
T 1ziw_A 406 HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485 (680)
T ss_dssp TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEE
T ss_pred CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEE
Confidence 45555555555543333 34445555555555555544444444444555555555555443 3445555666666666
Q ss_pred EccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCC--------ccccCccccceeecccccccCCCchhc
Q 048796 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP--------SDIGNMGRLRLLNLANNHLSGKMPSEL 202 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~~~~~ 202 (555)
+|++|.+++..+..+..+ ++|++|+|++|.+++..+ ..|.++++|+.|+|++|+|+...+..|
T Consensus 486 ~Ls~N~l~~i~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 556 (680)
T 1ziw_A 486 DLSNNNIANINDDMLEGL---------EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556 (680)
T ss_dssp ECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ECCCCCCCcCChhhhccc---------cccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHc
Confidence 666666665544444444 666777777776664321 225666677777777777764444456
Q ss_pred cCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCcc
Q 048796 203 SKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 203 ~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
.++++|+.|+|++|+|++..+..+. ++|+.|++++|++++..|..
T Consensus 557 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 603 (680)
T 1ziw_A 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV 603 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHH
T ss_pred ccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhH
Confidence 6777777777777777754444443 56777777777777655543
No 37
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=5.3e-26 Score=231.38 Aligned_cols=228 Identities=21% Similarity=0.184 Sum_probs=184.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..+. .+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..+.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 5899999999999976553 4678999999999999888888889999999999999999666666899999999999
Q ss_pred eCCcCCCCCc-hhccCCCCccEEEcCCC-cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 85 RNNSVTGTLP-SLLEISPRLVTLDVSSN-QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 85 ~~N~l~~~~~-~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++|+++.... ..+..+++|++|++++| .+....+..+..+++|+.|++++|.+.+..|..+..+ ++|++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l---------~~L~~ 202 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI---------QNVSH 202 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC---------SEEEE
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcc---------ccCCe
Confidence 9999996554 57899999999999999 4766667789999999999999999998888877766 89999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCc-------------------------------hhccCCCCCCEE
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMP-------------------------------SELSKLGALEYL 211 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-------------------------------~~~~~l~~L~~L 211 (555)
|++++|.++......+..+++|+.|++++|.+++..+ ..+..+++|+.|
T Consensus 203 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L 282 (353)
T 2z80_A 203 LILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLEL 282 (353)
T ss_dssp EEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEE
T ss_pred ecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEE
Confidence 9999999986544455668999999999999987433 334556666666
Q ss_pred eCCCCcCCCCCChhh-h--cCCCEEEeccCCCCCCcC
Q 048796 212 DLSGNQFKGEIPDKL-S--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 212 ~Ls~N~l~~~~p~~~-~--~~L~~L~ls~N~l~~~~p 245 (555)
|+++|+|+ .+|..+ . ++|+.|++++|++.|.+|
T Consensus 283 ~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 283 EFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 66666666 334332 2 566666666666666554
No 38
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.93 E-value=2.6e-26 Score=251.68 Aligned_cols=229 Identities=22% Similarity=0.324 Sum_probs=185.8
Q ss_pred CcCCCCCCEEECCCCcCCCC-----------------CCCC-----CCCCCEEEcCCCcCCCCCcccccCCCCccEEEcc
Q 048796 4 GINSTTLSVLNLSSNSLSGT-----------------LPTS-----LKSCVILDLSRNMISGDISDMQNWEANLEILDLS 61 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~-----------------~~~~-----l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 61 (555)
..++++|++|+|++|.|++. +|.. +++|++|+|++|++.+..+..+..+++|++|+|+
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 45788999999999999984 6654 5578899999999988888888888899999999
Q ss_pred CCc-CCC-CCCccccCC------CCccEEEeeCCcCCCCCch--hccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 62 SNK-LSG-SLPNLTSQF------DRLSTFNIRNNSVTGTLPS--LLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 62 ~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
+|. +++ .+|..++.+ ++|++|+|++|+++ .+|. .+..+++|++|+|++|+++|.+| .+..+++|+.|+
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 998 887 788877776 89999999999998 7777 88999999999999999988888 888888999999
Q ss_pred ccCCcccccCCcCccccccccccCCCCC-cCEEEccCCcCCCcCCccccCcc--ccceeecccccccCCCchhcc-----
Q 048796 132 LSGNGFSGAIPLRSSHASELLVLPSYPP-MESLDLSGNALTGVLPSDIGNMG--RLRLLNLANNHLSGKMPSELS----- 203 (555)
Q Consensus 132 Ls~N~l~~~~p~~~~~~~~l~~l~~~~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~----- 203 (555)
|++|.++ .+|..+..+ ++ |++|+|++|.++ .+|..+..+. +|+.|++++|.+++.+|..+.
T Consensus 360 L~~N~l~-~lp~~l~~l---------~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 360 LAYNQIT-EIPANFCGF---------TEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp CCSSEEE-ECCTTSEEE---------CTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCccc-cccHhhhhh---------cccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999988 777777766 66 888888888888 5666666654 788888888888887777777
Q ss_pred --CCCCCCEEeCCCCcCCCCCChhh-h--cCCCEEEeccCCCCCCcCcc
Q 048796 204 --KLGALEYLDLSGNQFKGEIPDKL-S--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 204 --~l~~L~~L~Ls~N~l~~~~p~~~-~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
.+++|+.|+|++|.++ .+|..+ . ++|+.|++++|.++ .+|..
T Consensus 429 ~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~ 475 (636)
T 4eco_A 429 PFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKN 475 (636)
T ss_dssp CCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSS
T ss_pred cccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHH
Confidence 6778888888888888 444433 2 67888888888887 55543
No 39
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.93 E-value=6.5e-26 Score=247.63 Aligned_cols=223 Identities=21% Similarity=0.183 Sum_probs=118.2
Q ss_pred CCCCCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC--CCccccCCCCccEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS--LPNLTSQFDRLSTF 82 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L 82 (555)
++++|++|++++|.+ +.+|. .+++|++|++++|...+.. .+..+++|++|+|++|.+++. .+..+..+++|++|
T Consensus 305 ~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L 381 (606)
T 3vq2_A 305 KHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHL 381 (606)
T ss_dssp TTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEE
T ss_pred ccccCCEEEcccccC-cccccCCCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEe
Confidence 455677777777777 34443 3445556666665333221 233445555555555555533 24455555555555
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
+|++|.+++ +|..+..+++|+.|++++|++.+..+ ..+..+++|+.|++++|.+.+..|..+..+ ++|+
T Consensus 382 ~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~ 451 (606)
T 3vq2_A 382 DLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGL---------TSLN 451 (606)
T ss_dssp ECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTC---------TTCC
T ss_pred ECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCC---------CCCC
Confidence 555555553 33445555555555555555554444 345555555555555555555554444443 5555
Q ss_pred EEEccCCcCCC-cCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccC
Q 048796 162 SLDLSGNALTG-VLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYN 238 (555)
Q Consensus 162 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N 238 (555)
+|+|++|.+++ .+|..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++..|..+. ++|+.|++++|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 55555555554 2444555555555555555555555555555555555555555555554444443 44555555555
Q ss_pred CCC
Q 048796 239 DLS 241 (555)
Q Consensus 239 ~l~ 241 (555)
+++
T Consensus 532 ~l~ 534 (606)
T 3vq2_A 532 RIE 534 (606)
T ss_dssp CCC
T ss_pred cCc
Confidence 555
No 40
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=9e-25 Score=213.67 Aligned_cols=206 Identities=23% Similarity=0.222 Sum_probs=183.1
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
..+.+.+++++++++.++.... ++|++|+|++|.+++..+..|..+++|++|+|++|.|+...+..|..+++|++|+
T Consensus 15 ~~~~~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 15 NNNKNSVDCSSKKLTAIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp ETTTTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CCCCCEEEccCCCCCccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 3467899999999997765443 4799999999999987778999999999999999999977777889999999999
Q ss_pred cCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCcccccee
Q 048796 108 VSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLL 187 (555)
Q Consensus 108 L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (555)
|++|++++..+..|..+++|+.|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..|..+++|+.|
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 162 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSL---------TKLTYLSLGYNELQSLPKGVFDKLTSLKEL 162 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcC---------cCCCEEECCCCcCCccCHhHccCCccccee
Confidence 99999997777788899999999999999998777666666 999999999999998877789999999999
Q ss_pred ecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcC
Q 048796 188 NLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
+|++|.+++..+..|..+++|+.|+|++|++++..+..+. ++|+.|++++|++.|.++
T Consensus 163 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 163 RLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred EecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9999999988778899999999999999999976665555 789999999999988654
No 41
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.93 E-value=4.3e-25 Score=244.44 Aligned_cols=237 Identities=20% Similarity=0.226 Sum_probs=203.8
Q ss_pred CCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCC-cccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 8 TTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDI-SDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~-~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++|+.|+|++|++++..|.. +++|++|+|++|.+++.. ...+..+++|++|+|++|.+.+..+..|..+++|+.|+
T Consensus 381 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~ 460 (680)
T 1ziw_A 381 SPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLM 460 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEE
T ss_pred CcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccch
Confidence 57888888888888776654 568899999999998644 46788889999999999999988899999999999999
Q ss_pred eeCCcCC--CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC
Q 048796 84 IRNNSVT--GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME 161 (555)
Q Consensus 84 L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~ 161 (555)
+++|.+. +..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..+... ....+..+++|+
T Consensus 461 l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~~~~~~~l~~L~ 539 (680)
T 1ziw_A 461 LRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG-PIYFLKGLSHLH 539 (680)
T ss_dssp CTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTS-CCCTTTTCTTCC
T ss_pred hccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCC-cchhhcCCCCCC
Confidence 9999987 5688899999999999999999998778889999999999999999986543322111 111244569999
Q ss_pred EEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh---cCCCEEEeccC
Q 048796 162 SLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSYN 238 (555)
Q Consensus 162 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~N 238 (555)
+|+|++|.++...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+. ++|+.+++++|
T Consensus 540 ~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N 619 (680)
T 1ziw_A 540 ILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN 619 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTC
T ss_pred EEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCC
Confidence 999999999976667899999999999999999988778889999999999999999987777653 78999999999
Q ss_pred CCCCCcC
Q 048796 239 DLSGPIP 245 (555)
Q Consensus 239 ~l~~~~p 245 (555)
++.|.++
T Consensus 620 ~~~c~c~ 626 (680)
T 1ziw_A 620 PFDCTCE 626 (680)
T ss_dssp CCCBCCC
T ss_pred CcccCCc
Confidence 9999876
No 42
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=1.3e-26 Score=231.79 Aligned_cols=226 Identities=21% Similarity=0.195 Sum_probs=142.0
Q ss_pred CCCCCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCC-CCccccc-------CCCCccEEEccCCcCCCCCCccc--cC
Q 048796 7 STTLSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISG-DISDMQN-------WEANLEILDLSSNKLSGSLPNLT--SQ 75 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~-~~~~~~~-------~~~~L~~L~Ls~N~l~~~~~~~~--~~ 75 (555)
.++|++|++++|.+ .+|..+ ..|+.|+|++|.++. ..+..+. .+++|++|+|++|.+++.+|..+ ..
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CCCceeEeeccccc--ccHHHHHHHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 34577777777777 455432 236667777777743 2222222 35567777777777776666654 67
Q ss_pred CCCccEEEeeCCcCCCCCchhccCC-----CCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccC--CcCcccc
Q 048796 76 FDRLSTFNIRNNSVTGTLPSLLEIS-----PRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAI--PLRSSHA 148 (555)
Q Consensus 76 l~~L~~L~L~~N~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~--p~~~~~~ 148 (555)
+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..+..+++|+.|+|++|.+.+.+ +..+
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--- 195 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL--- 195 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS---
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH---
Confidence 77777777777777765 5555554 67777777777777666667777777777777777765431 1111
Q ss_pred ccccccCCCCCcCEEEccCCcCCCc---CCccccCccccceeecccccccCCCc-hhccCCCCCCEEeCCCCcCCCCCCh
Q 048796 149 SELLVLPSYPPMESLDLSGNALTGV---LPSDIGNMGRLRLLNLANNHLSGKMP-SELSKLGALEYLDLSGNQFKGEIPD 224 (555)
Q Consensus 149 ~~l~~l~~~~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~ 224 (555)
.+..+++|++|+|++|.|++. ....+..+++|+.|+|++|.|++..| ..+..+++|++|+|++|.|+ .+|.
T Consensus 196 ----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~ 270 (312)
T 1wwl_A 196 ----CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPK 270 (312)
T ss_dssp ----CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCS
T ss_pred ----HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhh
Confidence 012236777777777777632 11233456677777777777776553 34555677777777777777 5555
Q ss_pred hhhcCCCEEEeccCCCCCC
Q 048796 225 KLSLKLNEFNVSYNDLSGP 243 (555)
Q Consensus 225 ~~~~~L~~L~ls~N~l~~~ 243 (555)
.+.++|+.||+++|+|++.
T Consensus 271 ~~~~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 271 GLPAKLSVLDLSYNRLDRN 289 (312)
T ss_dssp SCCSEEEEEECCSSCCCSC
T ss_pred hccCCceEEECCCCCCCCC
Confidence 5446677777777777765
No 43
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.93 E-value=2.6e-25 Score=238.25 Aligned_cols=104 Identities=26% Similarity=0.264 Sum_probs=67.5
Q ss_pred CCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|.+++..| ..+++|++|+|++|+|++..+..+..+++|++|+|++|.|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 567777777777765544 34566677777777777666666666666777777777766 34433 5666777777
Q ss_pred eCCcCCC-CCchhccCCCCccEEEcCCCcCC
Q 048796 85 RNNSVTG-TLPSLLEISPRLVTLDVSSNQLK 114 (555)
Q Consensus 85 ~~N~l~~-~~~~~l~~l~~L~~L~L~~N~l~ 114 (555)
++|.+++ .+|..++.+++|++|+|++|+++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccc
Confidence 7776665 35566666666666666666654
No 44
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.93 E-value=9.7e-25 Score=247.06 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=57.2
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEe
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNV 235 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l 235 (555)
++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..+. ++|+.|++
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 4566666666666665566666666666666666666666666666666666666666666655555444 55666666
Q ss_pred ccCCCCCCcCccccCC
Q 048796 236 SYNDLSGPIPENLRNF 251 (555)
Q Consensus 236 s~N~l~~~~p~~l~~~ 251 (555)
++|.+.+..+..+..+
T Consensus 346 ~~N~i~~~~~~~~~~l 361 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFL 361 (844)
T ss_dssp CSCCCCCCCSSCSCSC
T ss_pred CCCCCCccChhhhcCC
Confidence 6666655544444433
No 45
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.93 E-value=3e-25 Score=242.30 Aligned_cols=232 Identities=19% Similarity=0.118 Sum_probs=157.5
Q ss_pred CCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++++|+.|++++|.++. +| ..+++|++|++++|.+..+ +.. .+++|+.|++++|...+.. .+..+++|++|+
T Consensus 283 ~l~~L~~L~l~~~~~~~-l~~l~~~~~L~~L~l~~n~l~~l-p~~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 356 (606)
T 3vq2_A 283 CLANVSAMSLAGVSIKY-LEDVPKHFKWQSLSIIRCQLKQF-PTL--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLD 356 (606)
T ss_dssp GGTTCSEEEEESCCCCC-CCCCCTTCCCSEEEEESCCCSSC-CCC--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEE
T ss_pred cCCCCCEEEecCccchh-hhhccccccCCEEEcccccCccc-ccC--CCCccceeeccCCcCccch--hhccCCCCCEEE
Confidence 45677777777777753 33 2345677777777777433 333 5667777777777544333 456777777777
Q ss_pred eeCCcCCCC--CchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCCc
Q 048796 84 IRNNSVTGT--LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPPM 160 (555)
Q Consensus 84 L~~N~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L 160 (555)
|++|.+++. .+..+..+++|++|++++|.++ .+|..+..+++|+.|++++|.+.+..+ ..+..+ ++|
T Consensus 357 ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---------~~L 426 (606)
T 3vq2_A 357 LSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL---------EKL 426 (606)
T ss_dssp CCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC---------TTC
T ss_pred CcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhcc---------ccC
Confidence 777777654 3666777777777777777776 355667777777777777777776655 344444 677
Q ss_pred CEEEccCCcCCCcCCccccCccccceeecccccccC-CCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEecc
Q 048796 161 ESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSG-KMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSY 237 (555)
Q Consensus 161 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~ 237 (555)
++|++++|.+++..|..+..+++|+.|++++|.+++ .+|..+..+++|+.|++++|.+++..|..+. ++|+.|++++
T Consensus 427 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 777777777777777777777777777777777776 3566677777777777777777766666555 6777777777
Q ss_pred CCCCCCcCccccCCCC
Q 048796 238 NDLSGPIPENLRNFPK 253 (555)
Q Consensus 238 N~l~~~~p~~l~~~~~ 253 (555)
|++++..|..+..++.
T Consensus 507 N~l~~~~~~~~~~l~~ 522 (606)
T 3vq2_A 507 NNLLFLDSSHYNQLYS 522 (606)
T ss_dssp SCCSCEEGGGTTTCTT
T ss_pred CcCCCcCHHHccCCCc
Confidence 7777776766655543
No 46
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.9e-24 Score=213.43 Aligned_cols=201 Identities=25% Similarity=0.229 Sum_probs=105.6
Q ss_pred CCCCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 6 NSTTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
++++|+++++++|+|+...+...+++++|+|++|+|++..+..+..+++|+.|+|++|.|++..+. ..+++|++|+|+
T Consensus 8 ~l~~l~~l~~~~~~l~~ip~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls 85 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLS 85 (290)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECC
T ss_pred ccCCccEEECCCCCCCcCCCCCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECC
Confidence 455666666666666632222234556666666666555555555555566666666655532221 445555555555
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
+|.|+ .+|..+..+++|+.|+|++|+|++..+..|..++ +|++|+|
T Consensus 86 ~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~---------------------------------~L~~L~L 131 (290)
T 1p9a_G 86 HNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG---------------------------------ELQELYL 131 (290)
T ss_dssp SSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT---------------------------------TCCEEEC
T ss_pred CCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCC---------------------------------CCCEEEC
Confidence 55555 3344444555555555555555543334444444 4455555
Q ss_pred cCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCC
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~ 243 (555)
++|.|++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|+|+ .+|..+. .+|+.+++++|++.|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 555555444444555555555555555555444444455555555555555555 3333333 4566666666666553
No 47
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.2e-24 Score=233.10 Aligned_cols=236 Identities=19% Similarity=0.206 Sum_probs=173.2
Q ss_pred cCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCC-CCCccccCCCCcc
Q 048796 5 INSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG-SLPNLTSQFDRLS 80 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~ 80 (555)
.++++|++|+|++|+|++..|+ .+++|++|+|++|+|+.++.. .+++|++|+|++|.+++ .+|..|+.+++|+
T Consensus 42 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 42 LSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLK 118 (520)
T ss_dssp TTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCC
T ss_pred cccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc---ccCCccEEeccCCccccccchhhhccCCcce
Confidence 3567788888888887766553 355677778887777754433 55677777777777775 3566777777777
Q ss_pred EEEeeCCcCC-------------------------CCCchhccCC-----------------------------------
Q 048796 81 TFNIRNNSVT-------------------------GTLPSLLEIS----------------------------------- 100 (555)
Q Consensus 81 ~L~L~~N~l~-------------------------~~~~~~l~~l----------------------------------- 100 (555)
+|+|++|.++ +..|..+..+
T Consensus 119 ~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 198 (520)
T 2z7x_B 119 FLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK 198 (520)
T ss_dssp EEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEE
T ss_pred EEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccc
Confidence 7777766653 2223333321
Q ss_pred ------------------------------------------------CCccEEEcCCCcCCCCCchhh-----------
Q 048796 101 ------------------------------------------------PRLVTLDVSSNQLKGPIPDNF----------- 121 (555)
Q Consensus 101 ------------------------------------------------~~L~~L~L~~N~l~~~~~~~~----------- 121 (555)
++|++|++++|++++.+|..+
T Consensus 199 ~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L 278 (520)
T 2z7x_B 199 CVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKAL 278 (520)
T ss_dssp ECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEE
T ss_pred ccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCcee
Confidence 156667777776665555443
Q ss_pred ------------------------------------------hCCCCCCeEEccCCcccccCCcCccccccccccCCCCC
Q 048796 122 ------------------------------------------FSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPP 159 (555)
Q Consensus 122 ------------------------------------------~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~ 159 (555)
..+++|+.|++++|.+++.+|..+..+ ++
T Consensus 279 ~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---------~~ 349 (520)
T 2z7x_B 279 SIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHL---------TE 349 (520)
T ss_dssp EEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCC---------SS
T ss_pred EeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccC---------CC
Confidence 567889999999999998888777666 88
Q ss_pred cCEEEccCCcCCC--cCCccccCccccceeecccccccCCCch-hccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEec
Q 048796 160 MESLDLSGNALTG--VLPSDIGNMGRLRLLNLANNHLSGKMPS-ELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVS 236 (555)
Q Consensus 160 L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls 236 (555)
|++|+|++|.+++ .+|..+..+++|+.|+|++|.+++.+|. .+..+++|+.|++++|.+++..|..+.++|+.|+++
T Consensus 350 L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls 429 (520)
T 2z7x_B 350 LETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLH 429 (520)
T ss_dssp CCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECC
T ss_pred CCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECC
Confidence 9999999999986 4556788999999999999999874554 478889999999999999887777666789999999
Q ss_pred cCCCCCCcCccccCCCC
Q 048796 237 YNDLSGPIPENLRNFPK 253 (555)
Q Consensus 237 ~N~l~~~~p~~l~~~~~ 253 (555)
+|.++ .+|..+..++.
T Consensus 430 ~N~l~-~ip~~~~~l~~ 445 (520)
T 2z7x_B 430 SNKIK-SIPKQVVKLEA 445 (520)
T ss_dssp SSCCC-CCCGGGGGCTT
T ss_pred CCccc-ccchhhhcCCC
Confidence 99998 67776555544
No 48
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=9.1e-25 Score=214.30 Aligned_cols=209 Identities=23% Similarity=0.219 Sum_probs=182.5
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..+. .+++|++|+|++|+++++.+..+..+++|++|+|++|.+++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4699999999999976554 4678999999999999888888899999999999999999888889999999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCC-CchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcC-E
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP-IPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPME-S 162 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~-~ 162 (555)
++|.+.+..+..+..+++|++|+|++|++++. +|..+..+++|+.|+|++|.+++..+..+..+.. ++.|. .
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~------L~~l~l~ 181 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ------MPLLNLS 181 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHT------CTTCCEE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhh------cccccee
Confidence 99999987777899999999999999999864 5899999999999999999999877666665522 23343 8
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 223 (555)
|++++|.+++..+..+.. .+|+.|+|++|.|++..+..+..+++|+.|++++|++++..+
T Consensus 182 L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 182 LDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred eecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 999999999776666654 489999999999998777778999999999999999998765
No 49
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=8.3e-26 Score=252.81 Aligned_cols=229 Identities=19% Similarity=0.300 Sum_probs=155.4
Q ss_pred CCcCC---CCCCEEECCCCcCCCCCCCC---CCCCCEEEc-CCCcCCCC-------------------------------
Q 048796 3 HGINS---TTLSVLNLSSNSLSGTLPTS---LKSCVILDL-SRNMISGD------------------------------- 44 (555)
Q Consensus 3 ~~~n~---~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L-~~N~l~~~------------------------------- 44 (555)
.|+.| ..++.|+|++|+|.|.+|.. +++|++|+| ++|.+++.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~ 394 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDY 394 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCC
T ss_pred CceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhcc
Confidence 44555 46999999999999988865 667889999 77765433
Q ss_pred ---------------------------------------------CcccccCCCCccEEEccCCcCCC------------
Q 048796 45 ---------------------------------------------ISDMQNWEANLEILDLSSNKLSG------------ 67 (555)
Q Consensus 45 ---------------------------------------------~~~~~~~~~~L~~L~Ls~N~l~~------------ 67 (555)
+|..+..+++|+.|+|++|.|++
T Consensus 395 ~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 395 DQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp CGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred CcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 33345556667777777777776
Q ss_pred -----CCCcccc--CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc-CCC-CCchhhhCCC-------CCCeEE
Q 048796 68 -----SLPNLTS--QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ-LKG-PIPDNFFSSM-------ALTNLN 131 (555)
Q Consensus 68 -----~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~~~-------~L~~L~ 131 (555)
.+|..++ ++++|++|+|++|.+.+.+|..+..+++|+.|+|++|+ +++ .+|..++.+. +|+.|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 2666655 77777777777777776777777777777777777776 665 5666555444 777777
Q ss_pred ccCCcccccCCc--CccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCC-C
Q 048796 132 LSGNGFSGAIPL--RSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA-L 208 (555)
Q Consensus 132 Ls~N~l~~~~p~--~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L 208 (555)
|++|.++ .+|. .+..+ ++|+.|+|++|.++ .+| .|..+++|+.|+|++|.++ .+|..+..+++ |
T Consensus 555 Ls~N~L~-~ip~~~~l~~L---------~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L 621 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKM---------VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQV 621 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTC---------TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTC
T ss_pred eeCCcCC-ccCChhhhhcC---------CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccC
Confidence 7777776 5555 45544 66777777777776 555 6667777777777777776 56666666666 7
Q ss_pred CEEeCCCCcCCCCCChhhh----cCCCEEEeccCCCCCCcC
Q 048796 209 EYLDLSGNQFKGEIPDKLS----LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 209 ~~L~Ls~N~l~~~~p~~~~----~~L~~L~ls~N~l~~~~p 245 (555)
+.|+|++|.|+ .+|..+. .+|+.|++++|++++.+|
T Consensus 622 ~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip 661 (876)
T 4ecn_A 622 EGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGR 661 (876)
T ss_dssp CEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSS
T ss_pred CEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccc
Confidence 77777777776 5555443 236677777777766554
No 50
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.92 E-value=8.5e-25 Score=236.56 Aligned_cols=105 Identities=23% Similarity=0.238 Sum_probs=77.1
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|.|++..+. .+++|++|+|++|+|+++.+..+..+++|++|+|++|.|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 5788888888888766553 3557778888888888777777777777888888888877 44544 6777888888
Q ss_pred eCCcCCCC-CchhccCCCCccEEEcCCCcCCC
Q 048796 85 RNNSVTGT-LPSLLEISPRLVTLDVSSNQLKG 115 (555)
Q Consensus 85 ~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~ 115 (555)
++|++++. .|..|..+++|++|+|++|++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 88877753 45677777777777777777754
No 51
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.1e-25 Score=238.72 Aligned_cols=211 Identities=20% Similarity=0.216 Sum_probs=122.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|.|++..|. .+++|++|+|++|.|++..+ +..+++|++|+|++|.|++.. ..++|++|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC
Confidence 3566666666666655443 34456666666666655443 555556666666666665322 1256666666
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcc-ccccccccCCCCCcCEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSS-HASELLVLPSYPPMESL 163 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~~~~l~~l~~~~~L~~L 163 (555)
++|.|++..+. .+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+. .+ ++|+.|
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l---------~~L~~L 174 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS---------DTLEHL 174 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT---------TTCCEE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC---------CcccEE
Confidence 66666654433 235566666666666655555666666666666666666655554443 23 566666
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
+|++|.|++.. .+..+++|+.|+|++|.|++..+ .+..+++|+.|+|++|.|++ +|..+. ++|+.|++++|++.
T Consensus 175 ~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 175 NLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp ECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ecCCCcccccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 66666666542 23345666666666666665333 35566666666666666664 343333 45666666666665
No 52
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.5e-24 Score=212.63 Aligned_cols=199 Identities=24% Similarity=0.239 Sum_probs=142.9
Q ss_pred CCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeE
Q 048796 51 WEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNL 130 (555)
Q Consensus 51 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 130 (555)
.+++|+.+++++|.++ .+|..+. ++|+.|+|++|.|++..+..|..+++|+.|+|++|.|++. +. ...+++|+.|
T Consensus 8 ~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L 82 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTL 82 (290)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEE
T ss_pred ccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEE
Confidence 3445666666666666 3333332 4566666666666666666666677777777777776632 22 2566777777
Q ss_pred EccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCE
Q 048796 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEY 210 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 210 (555)
+|++|.++ .+|..+..+ ++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.
T Consensus 83 ~Ls~N~l~-~l~~~~~~l---------~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 83 DLSHNQLQ-SLPLLGQTL---------PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp ECCSSCCS-SCCCCTTTC---------TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ECCCCcCC-cCchhhccC---------CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 77777776 445444444 88899999999999888888999999999999999999888888899999999
Q ss_pred EeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCCCC--CCCCCccccc
Q 048796 211 LDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPKSS--FHPGNALLIF 265 (555)
Q Consensus 211 L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~~~--~~~~n~~~~~ 265 (555)
|+|++|+|+...+..+. ++|+.|++++|+++ .+|..+....... ...+|++.|.
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 99999999966655554 79999999999999 5666554443322 1236766553
No 53
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.92 E-value=6.2e-25 Score=237.94 Aligned_cols=233 Identities=18% Similarity=0.163 Sum_probs=165.0
Q ss_pred cCCCCCCEEECCCCcCCCCCCCCCC--CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPTSLK--SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.++++|++|++++|.+++ +|..+. +|++|++++|.+...+. ..+++|+.|++++|.+.+..+. ..+++|++|
T Consensus 279 ~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L 352 (570)
T 2z63_A 279 NCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFL 352 (570)
T ss_dssp GGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCB---CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEE
T ss_pred cCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCc---ccccccCEEeCcCCcccccccc--ccCCCCCEE
Confidence 356788999999988874 554322 78888888888875543 2455688888888877755544 667778888
Q ss_pred EeeCCcCCCCC--chhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCC
Q 048796 83 NIRNNSVTGTL--PSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPP 159 (555)
Q Consensus 83 ~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~ 159 (555)
++++|.+++.. +..+..+++|+.|++++|.+.+. +..+..+++|+.|++++|.+.+..+ ..+..+ ++
T Consensus 353 ~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---------~~ 422 (570)
T 2z63_A 353 DLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL---------RN 422 (570)
T ss_dssp ECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTC---------TT
T ss_pred eCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcC---------CC
Confidence 88888777543 56677777888888888877643 3347777788888888887776544 233333 77
Q ss_pred cCEEEccCCcCCCcCCccccCccccceeeccccccc-CCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEec
Q 048796 160 MESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLS-GKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVS 236 (555)
Q Consensus 160 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls 236 (555)
|++|++++|.+++..|..|..+++|+.|+|++|.++ +.+|..+..+++|+.|++++|++++..|..+. ++|+.|+++
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 777777777777777777777777777777777776 45667777777777777777777776666655 677777777
Q ss_pred cCCCCCCcCccccCCCC
Q 048796 237 YNDLSGPIPENLRNFPK 253 (555)
Q Consensus 237 ~N~l~~~~p~~l~~~~~ 253 (555)
+|++++..|..+..++.
T Consensus 503 ~n~l~~~~~~~~~~l~~ 519 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTS 519 (570)
T ss_dssp SSCCSCCCTTTTTTCTT
T ss_pred CCcCCCCCHHHhhcccC
Confidence 77777766665555544
No 54
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=1.4e-25 Score=224.75 Aligned_cols=221 Identities=19% Similarity=0.219 Sum_probs=169.1
Q ss_pred CCCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 7 STTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
+++|++|+|++|+|++..| ..+++|++|+|++|++++..+ +..+++|++|+|++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~ 105 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEE
Confidence 4578899999998887665 356788899999998876654 677788999999999887432 347888999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcc-ccccccccCCCCCcCE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSS-HASELLVLPSYPPMES 162 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~~~~l~~l~~~~~L~~ 162 (555)
+++|.+++..+.. +++|++|++++|++++..+..+..+++|+.|+|++|.+++..+..+. .+ ++|++
T Consensus 106 l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l---------~~L~~ 173 (317)
T 3o53_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS---------DTLEH 173 (317)
T ss_dssp CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGT---------TTCCE
T ss_pred CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhcc---------CcCCE
Confidence 9999888655433 57789999999998876677788888899999999988876655543 33 78899
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDL 240 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l 240 (555)
|+|++|.+++. .....+++|+.|+|++|.|++.. ..+..+++|+.|+|++|+|+ .+|..+. ++|+.|++++|++
T Consensus 174 L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~ 249 (317)
T 3o53_A 174 LNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGF 249 (317)
T ss_dssp EECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCC
T ss_pred EECCCCcCccc--ccccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCc
Confidence 99999998865 23345788999999999988644 45888889999999999888 4555554 6889999999998
Q ss_pred C-CCcCccccC
Q 048796 241 S-GPIPENLRN 250 (555)
Q Consensus 241 ~-~~~p~~l~~ 250 (555)
. +.+|..+..
T Consensus 250 ~~~~~~~~~~~ 260 (317)
T 3o53_A 250 HCGTLRDFFSK 260 (317)
T ss_dssp BHHHHHHHHHT
T ss_pred cCcCHHHHHhc
Confidence 8 444544433
No 55
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.92 E-value=5.9e-24 Score=232.95 Aligned_cols=262 Identities=20% Similarity=0.233 Sum_probs=198.2
Q ss_pred CcCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCcc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLS 80 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 80 (555)
..++++|++|+|++|+|+++.++. +++|++|+|++|+|+++++..|..+++|++|+|++|+|++..+..|+++++|+
T Consensus 72 f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~ 151 (635)
T 4g8a_A 72 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 151 (635)
T ss_dssp TTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred HhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccC
Confidence 357899999999999999776654 56889999999999999989999999999999999999987778899999999
Q ss_pred EEEeeCCcCCCC-CchhccCCCCccEEEcCCCcCCCCCchhhhCC-----------------------------------
Q 048796 81 TFNIRNNSVTGT-LPSLLEISPRLVTLDVSSNQLKGPIPDNFFSS----------------------------------- 124 (555)
Q Consensus 81 ~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~----------------------------------- 124 (555)
+|+|++|.++.. .|..+..+++|++|+|++|+|++..+..+..+
T Consensus 152 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l 231 (635)
T 4g8a_A 152 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTL 231 (635)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEE
T ss_pred eeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhh
Confidence 999999999764 67888999999999999998864433222110
Q ss_pred --------------------------------------------------------------------------------
Q 048796 125 -------------------------------------------------------------------------------- 124 (555)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (555)
T Consensus 232 ~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l 311 (635)
T 4g8a_A 232 RNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSF 311 (635)
T ss_dssp ESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEE
T ss_pred hcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccc
Confidence
Q ss_pred ----------------CCCCeEEccCCcccccCCcC--------------------------------------------
Q 048796 125 ----------------MALTNLNLSGNGFSGAIPLR-------------------------------------------- 144 (555)
Q Consensus 125 ----------------~~L~~L~Ls~N~l~~~~p~~-------------------------------------------- 144 (555)
..|+.|++.+|.+....+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~ 391 (635)
T 4g8a_A 312 SLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQ 391 (635)
T ss_dssp EEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCH
T ss_pred cccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhcccccccccccc
Confidence 11222333222221110000
Q ss_pred ------------------------ccccccc----------------c------------------------ccCCCCCc
Q 048796 145 ------------------------SSHASEL----------------L------------------------VLPSYPPM 160 (555)
Q Consensus 145 ------------------------~~~~~~l----------------~------------------------~l~~~~~L 160 (555)
+..+..+ . .+..++.|
T Consensus 392 ~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L 471 (635)
T 4g8a_A 392 SDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 471 (635)
T ss_dssp HHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred chhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhh
Confidence 0000000 0 01134567
Q ss_pred CEEEccCCcC-CCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEecc
Q 048796 161 ESLDLSGNAL-TGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSY 237 (555)
Q Consensus 161 ~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~ 237 (555)
+.|+|++|.+ .+..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+. ++|+.||+++
T Consensus 472 ~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~ 551 (635)
T 4g8a_A 472 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 551 (635)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTT
T ss_pred hhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCC
Confidence 7788888764 345677889999999999999999999999999999999999999999988888776 7999999999
Q ss_pred CCCCCCcCccccCCCC-CC--CCCCCccccc
Q 048796 238 NDLSGPIPENLRNFPK-SS--FHPGNALLIF 265 (555)
Q Consensus 238 N~l~~~~p~~l~~~~~-~~--~~~~n~~~~~ 265 (555)
|+|++..|..+..++. .. ...+|++.|.
T Consensus 552 N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 552 NHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp SCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999999988876642 22 1237777664
No 56
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.92 E-value=2.2e-24 Score=233.32 Aligned_cols=239 Identities=21% Similarity=0.177 Sum_probs=188.2
Q ss_pred CcCCCCCCEEECCCCcCCCCCCCC---CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC-CCccccCCCCc
Q 048796 4 GINSTTLSVLNLSSNSLSGTLPTS---LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS-LPNLTSQFDRL 79 (555)
Q Consensus 4 ~~n~~~L~~L~Ls~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~~~~~~~l~~L 79 (555)
..++++|++|+|++|+|++..|+. +++|++|+|++|+|+.++.. .+++|++|+|++|.+++. +|..|+++++|
T Consensus 72 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L 148 (562)
T 3a79_B 72 ISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKL 148 (562)
T ss_dssp TTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTC
T ss_pred hccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEECCCCCccccCchHhhcccCcc
Confidence 357889999999999999877765 56789999999999976554 678899999999999963 46899999999
Q ss_pred cEEEeeCCcCCCCCchhccCCCCc--cEEEcCCCcC--CCCCchhhhCCC------------------------------
Q 048796 80 STFNIRNNSVTGTLPSLLEISPRL--VTLDVSSNQL--KGPIPDNFFSSM------------------------------ 125 (555)
Q Consensus 80 ~~L~L~~N~l~~~~~~~l~~l~~L--~~L~L~~N~l--~~~~~~~~~~~~------------------------------ 125 (555)
++|+|++|.+++. .+..+++| +.|+|++|.+ ++..|..+..+.
T Consensus 149 ~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~ 225 (562)
T 3a79_B 149 TFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQL 225 (562)
T ss_dssp CEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEE
T ss_pred cEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEE
Confidence 9999999999864 34444555 9999999988 655555544432
Q ss_pred ---------------------------------------------------CCCeEEccCCcccccCCcCc-----cccc
Q 048796 126 ---------------------------------------------------ALTNLNLSGNGFSGAIPLRS-----SHAS 149 (555)
Q Consensus 126 ---------------------------------------------------~L~~L~Ls~N~l~~~~p~~~-----~~~~ 149 (555)
+|++|++++|.+.+.+|..+ ..+.
T Consensus 226 L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~ 305 (562)
T 3a79_B 226 SNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALK 305 (562)
T ss_dssp EEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCC
T ss_pred ecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccch
Confidence 67888888888888887765 2222
Q ss_pred cccc---------------------------------------cCCCCCcCEEEccCCcCCCcCCccccCccccceeecc
Q 048796 150 ELLV---------------------------------------LPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLA 190 (555)
Q Consensus 150 ~l~~---------------------------------------l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (555)
.+.. ...+++|++|+|++|.+++..|..+..+++|+.|+|+
T Consensus 306 ~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 385 (562)
T 3a79_B 306 SLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQ 385 (562)
T ss_dssp EEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECC
T ss_pred heehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECC
Confidence 1110 1466889999999999998888899999999999999
Q ss_pred cccccCC--CchhccCCCCCCEEeCCCCcCCCCCChh-hh--cCCCEEEeccCCCCCCcCccc
Q 048796 191 NNHLSGK--MPSELSKLGALEYLDLSGNQFKGEIPDK-LS--LKLNEFNVSYNDLSGPIPENL 248 (555)
Q Consensus 191 ~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~L~ls~N~l~~~~p~~l 248 (555)
+|++++. +|..+..+++|+.|++++|.+++.+|.. +. ++|+.|++++|.+++.+|..+
T Consensus 386 ~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 448 (562)
T 3a79_B 386 RNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL 448 (562)
T ss_dssp SSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSC
T ss_pred CCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhh
Confidence 9999863 3466888999999999999999756654 32 678888888888887766554
No 57
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.92 E-value=1e-24 Score=235.30 Aligned_cols=165 Identities=20% Similarity=0.175 Sum_probs=119.0
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++|++|+|++|++++..|. .+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 5788888888888766554 3557778888888888777777777778888888888888766666788888888888
Q ss_pred eCCcCCCC-CchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCcccccccccc--------
Q 048796 85 RNNSVTGT-LPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL-------- 154 (555)
Q Consensus 85 ~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l-------- 154 (555)
++|.+++. .+..+..+++|++|++++|.+.+.++ ..+..+++|+.|++++|.+++..|..+..+..+..+
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 88888753 45677778888888888887443444 567777788888888888877777766655443322
Q ss_pred -------CCCCCcCEEEccCCcCCC
Q 048796 155 -------PSYPPMESLDLSGNALTG 172 (555)
Q Consensus 155 -------~~~~~L~~L~Ls~N~l~~ 172 (555)
..+++|++|++++|.+++
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred ccchhhHhhcccccEEEccCCcccc
Confidence 135666777777766665
No 58
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=7.3e-25 Score=219.00 Aligned_cols=220 Identities=20% Similarity=0.267 Sum_probs=177.0
Q ss_pred CCEEECCCCcCC-CCCCC----------CCCCCCEEEcCCCcCCCCCcccc--cCCCCccEEEccCCcCCCCCCccccCC
Q 048796 10 LSVLNLSSNSLS-GTLPT----------SLKSCVILDLSRNMISGDISDMQ--NWEANLEILDLSSNKLSGSLPNLTSQF 76 (555)
Q Consensus 10 L~~L~Ls~N~l~-~~~~~----------~l~~L~~L~L~~N~l~~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~~~~~~l 76 (555)
|+.|+|++|+++ ..+|. .+++|++|+|++|++++..+..+ ..+++|++|+|++|.+++. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 788899999985 34443 47899999999999987665543 7788999999999999976 7777776
Q ss_pred -----CCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCC--Cchhh--hCCCCCCeEEccCCccccc--CCcCc
Q 048796 77 -----DRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP--IPDNF--FSSMALTNLNLSGNGFSGA--IPLRS 145 (555)
Q Consensus 77 -----~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~~~~--~~~~~L~~L~Ls~N~l~~~--~p~~~ 145 (555)
++|++|+|++|++++..+..+..+++|++|+|++|++.+. .+..+ ..+++|+.|+|++|.+++. ++..
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~- 222 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSA- 222 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHH-
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHH-
Confidence 8999999999999988888999999999999999998754 23444 7889999999999998732 1111
Q ss_pred cccccccccCCCCCcCEEEccCCcCCCcCC-ccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCCh
Q 048796 146 SHASELLVLPSYPPMESLDLSGNALTGVLP-SDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPD 224 (555)
Q Consensus 146 ~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 224 (555)
.+..+++|++|+|++|.+++..| ..+..+++|+.|+|++|.|+ .+|..+. ++|++|||++|+|++. |.
T Consensus 223 -------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~ 291 (312)
T 1wwl_A 223 -------LAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS 291 (312)
T ss_dssp -------HHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC
T ss_pred -------HHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh
Confidence 11234889999999999998775 45667899999999999998 6777665 8899999999999976 55
Q ss_pred hhh--cCCCEEEeccCCCCCC
Q 048796 225 KLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 225 ~~~--~~L~~L~ls~N~l~~~ 243 (555)
+. ++|+.|++++|++++.
T Consensus 292 -~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 292 -PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp -TTTSCEEEEEECTTCTTTCC
T ss_pred -HhhCCCCCEEeccCCCCCCC
Confidence 43 7899999999999863
No 59
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=1.5e-23 Score=234.71 Aligned_cols=231 Identities=19% Similarity=0.322 Sum_probs=134.0
Q ss_pred CCCCCEEECCCCcCCCCCCC-----CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCC-cc
Q 048796 7 STTLSVLNLSSNSLSGTLPT-----SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDR-LS 80 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~ 80 (555)
+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+. ++ .+..+++|+.|+|++|.++ .+|..+..+++ |+
T Consensus 547 l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~-lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~ 622 (876)
T 4ecn_A 547 GPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRH-LE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVE 622 (876)
T ss_dssp TTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCB-CC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCC
T ss_pred cCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCccc-ch-hhcCCCcceEEECcCCccc-cchHHHhhccccCC
Confidence 345666666666665 4444 34455666666666652 22 4555556666666666665 55555666665 66
Q ss_pred EEEeeCCcCCCCCchhccCCCC--ccEEEcCCCcCCCCCchh---hh--CCCCCCeEEccCCcccccCCcCccccccccc
Q 048796 81 TFNIRNNSVTGTLPSLLEISPR--LVTLDVSSNQLKGPIPDN---FF--SSMALTNLNLSGNGFSGAIPLRSSHASELLV 153 (555)
Q Consensus 81 ~L~L~~N~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~~~~---~~--~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 153 (555)
+|+|++|.|+ .+|..+..+.. |+.|+|++|++++.+|.. +. .+.+|+.|+|++|.++ .+|..+.
T Consensus 623 ~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~------- 693 (876)
T 4ecn_A 623 GLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELF------- 693 (876)
T ss_dssp EEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHH-------
T ss_pred EEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHH-------
Confidence 6666666665 44555544432 566666666655443321 11 2335666666666666 3333221
Q ss_pred cCCCCCcCEEEccCCcCCCcCCcc-cc-------CccccceeecccccccCCCchhcc--CCCCCCEEeCCCCcCCCCCC
Q 048796 154 LPSYPPMESLDLSGNALTGVLPSD-IG-------NMGRLRLLNLANNHLSGKMPSELS--KLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 154 l~~~~~L~~L~Ls~N~l~~~~p~~-~~-------~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p 223 (555)
..+++|+.|+|++|.|+ .+|.. +. ++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|
T Consensus 694 -~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp 769 (876)
T 4ecn_A 694 -ATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FP 769 (876)
T ss_dssp -HTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred -ccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cc
Confidence 12267777777777777 33333 22 2237777777777777 5666665 67777777777777776 55
Q ss_pred hhhh--cCCCEEEecc------CCCCCCcCccccCCCCC
Q 048796 224 DKLS--LKLNEFNVSY------NDLSGPIPENLRNFPKS 254 (555)
Q Consensus 224 ~~~~--~~L~~L~ls~------N~l~~~~p~~l~~~~~~ 254 (555)
..+. ++|+.|++++ |.+.+.+|..+..++..
T Consensus 770 ~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L 808 (876)
T 4ecn_A 770 TQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSL 808 (876)
T ss_dssp CGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred hhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCC
Confidence 5544 6677777755 66677777666555443
No 60
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.8e-24 Score=211.72 Aligned_cols=205 Identities=18% Similarity=0.169 Sum_probs=181.7
Q ss_pred cCCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
.++++|+.|++++|.++.... ..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccccceeeeeeCCCCcccccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 356789999999999984321 4588999999999999875 3567788999999999999988888899999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
|++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+++..+..+..+ ++|++|
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L 186 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKL---------TQLKDL 186 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEE
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCC---------ccCCEE
Confidence 99999998888889999999999999999997777778899999999999999997777666665 899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
+|++|.+++..+..|..+++|+.|+|++|.+.+. +++|+.|++..|.++|.+|..+.
T Consensus 187 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred ECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 9999999998888899999999999999998754 56799999999999999997654
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.91 E-value=4e-23 Score=209.44 Aligned_cols=224 Identities=20% Similarity=0.262 Sum_probs=154.4
Q ss_pred cCCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.++++|++|+|++|.++.. + ..+++|++|+|++|.+++..+ +..+++|+.|++++|.....++ .+..+++|++|
T Consensus 85 ~~l~~L~~L~L~~n~i~~~-~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L 160 (347)
T 4fmz_A 85 SNLVKLTNLYIGTNKITDI-SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYL 160 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC-GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEE
T ss_pred hcCCcCCEEEccCCcccCc-hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEE
Confidence 4678999999999999853 3 457889999999999987654 6677889999999996654443 47888889999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
++++|.+.+..+ +..+++|+.|++++|.+.+. +. +..+++|+.|++++|.+.+..+ +..+ ++|++
T Consensus 161 ~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~---------~~L~~ 225 (347)
T 4fmz_A 161 TVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VANM---------TRLNS 225 (347)
T ss_dssp ECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGGC---------TTCCE
T ss_pred EecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhcC---------CcCCE
Confidence 999988885544 77888888888888888743 33 7777888888888887775433 3333 56666
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLS 241 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~ 241 (555)
|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++. +.... ++|+.|++++|+++
T Consensus 226 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 226 LKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC
T ss_pred EEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCC
Confidence 6666666664432 56666666666666666642 3455666666666666666643 22111 56666666666666
Q ss_pred CCcCccccCCC
Q 048796 242 GPIPENLRNFP 252 (555)
Q Consensus 242 ~~~p~~l~~~~ 252 (555)
+..|..+..++
T Consensus 301 ~~~~~~l~~l~ 311 (347)
T 4fmz_A 301 NEDMEVIGGLT 311 (347)
T ss_dssp GGGHHHHHTCT
T ss_pred CcChhHhhccc
Confidence 55555444443
No 62
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.91 E-value=2.8e-23 Score=210.55 Aligned_cols=219 Identities=22% Similarity=0.335 Sum_probs=183.1
Q ss_pred cCCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
.++++|++|+|++|.+++..+ ..+++|++|++++|......+. +..+++|++|++++|.+.+..+ +..+++|++|+
T Consensus 107 ~~l~~L~~L~l~~n~i~~~~~~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~ 183 (347)
T 4fmz_A 107 QNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLS 183 (347)
T ss_dssp TTCTTCSEEECTTSCCCCCGGGTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEE
T ss_pred cCCCcCCEEECcCCcccCchhhccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEE
Confidence 467899999999999986543 4678999999999966554444 6777889999999999985443 88999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
+++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +.. +++|++|
T Consensus 184 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~---------l~~L~~L 248 (347)
T 4fmz_A 184 LNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LAN---------LSQLTWL 248 (347)
T ss_dssp CTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT---------CTTCCEE
T ss_pred ccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhc---------CCCCCEE
Confidence 99999986544 8889999999999999985444 8889999999999999985433 333 4899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+. ++|+.|++++|+++
T Consensus 249 ~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 249 EIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred ECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccc
Confidence 9999999864 5688899999999999999864 4688899999999999999987777766 78999999999999
Q ss_pred CCcC
Q 048796 242 GPIP 245 (555)
Q Consensus 242 ~~~p 245 (555)
+..|
T Consensus 325 ~~~~ 328 (347)
T 4fmz_A 325 DIRP 328 (347)
T ss_dssp CCGG
T ss_pred cccC
Confidence 8776
No 63
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.91 E-value=4.1e-23 Score=218.13 Aligned_cols=214 Identities=26% Similarity=0.334 Sum_probs=111.7
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++++|++|++++|.+++... ..+++|++|++++|.+++..+ +..+++|+.|+|++|.+++. ..+..+++|++|++
T Consensus 175 ~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 250 (466)
T 1o6v_A 175 NLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 250 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred cCCCCCEEECcCCcCCCChhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEEC
Confidence 44555555555555553211 234555555555555554433 33344555555555555532 23455555555555
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+.+..+ +.. +++|+.|+
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~---------l~~L~~L~ 315 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN---------LKNLTYLT 315 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGG---------CTTCSEEE
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcC---------CCCCCEEE
Confidence 5555554433 5555555555555555553222 5555555555555555554322 222 25556666
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
|++|.+++..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..|..-.++|+.|++++|++++
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 66666655433 45555666666666665543 3455556666666666666555441111556666666666554
No 64
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.2e-23 Score=201.49 Aligned_cols=159 Identities=24% Similarity=0.287 Sum_probs=102.4
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
+|+.|+|++|.+++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555555445555555555555555555555555555555556666666665554444455555666666666
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
+|.+++..+..+..+ ++|++|+|++|.|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 116 ~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 186 (251)
T 3m19_A 116 GNQLKSLPSGVFDRL---------TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITL 186 (251)
T ss_dssp SSCCCCCCTTTTTTC---------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred CCcCCCcChhHhccC---------CcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 666654444434433 66777777777777666667777888888888888888777777888888888888
Q ss_pred CCCcCCCC
Q 048796 214 SGNQFKGE 221 (555)
Q Consensus 214 s~N~l~~~ 221 (555)
++|.+++.
T Consensus 187 ~~N~~~c~ 194 (251)
T 3m19_A 187 FGNQFDCS 194 (251)
T ss_dssp CSCCBCTT
T ss_pred eCCceeCC
Confidence 88888865
No 65
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=6.9e-24 Score=203.44 Aligned_cols=208 Identities=19% Similarity=0.153 Sum_probs=174.7
Q ss_pred CcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCc-CCCCCCccccCCCCccEEEeeC-CcCCCCCch
Q 048796 18 NSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK-LSGSLPNLTSQFDRLSTFNIRN-NSVTGTLPS 95 (555)
Q Consensus 18 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~ 95 (555)
++++ .+|.-..+|++|+|++|+|+++.+..+..+++|++|+|++|. ++...+..|.++++|++|+|++ |.++...+.
T Consensus 21 ~~l~-~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 21 KDIQ-RIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPD 99 (239)
T ss_dssp CSCS-SCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTT
T ss_pred cCcc-ccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHH
Confidence 3365 456633479999999999998888888889999999999997 8877777899999999999998 999977778
Q ss_pred hccCCCCccEEEcCCCcCCCCCchhhhCCCCCC---eEEccCC-cccccCCcCccccccccccCCCCCcC-EEEccCCcC
Q 048796 96 LLEISPRLVTLDVSSNQLKGPIPDNFFSSMALT---NLNLSGN-GFSGAIPLRSSHASELLVLPSYPPME-SLDLSGNAL 170 (555)
Q Consensus 96 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~---~L~Ls~N-~l~~~~p~~~~~~~~l~~l~~~~~L~-~L~Ls~N~l 170 (555)
.|..+++|++|++++|++++ +|. +..+.+|+ .|++++| .+++..+..+..+ ++|+ .|++++|.+
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l---------~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGL---------CNETLTLKLYNNGF 168 (239)
T ss_dssp SEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTT---------BSSEEEEECCSCCC
T ss_pred HhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccch---------hcceeEEEcCCCCC
Confidence 89999999999999999985 665 88888888 9999999 8987666666665 8899 999999999
Q ss_pred CCcCCccccCccccceeeccccc-ccCCCchhccCC-CCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCC
Q 048796 171 TGVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKL-GALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYND 239 (555)
Q Consensus 171 ~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~ 239 (555)
+...+..|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|+|++. |.....+|+.|+++++.
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSKGLEHLKELIARNTW 237 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCTTCTTCSEEECTTC-
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-ChhHhccCceeeccCcc
Confidence 9555555555 899999999995 997777889999 9999999999999954 44444789999988763
No 66
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.90 E-value=2.1e-23 Score=225.93 Aligned_cols=226 Identities=23% Similarity=0.219 Sum_probs=175.6
Q ss_pred CCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCC--CccccCCCCccEEEeeC
Q 048796 9 TLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSL--PNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L~~ 86 (555)
+|++|++++|.++......+++|++|++++|.+.+..+. ..+++|++|+|++|.+++.. +..+..+++|++|++++
T Consensus 305 ~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~ 382 (570)
T 2z63_A 305 GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSF 382 (570)
T ss_dssp CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCS
T ss_pred CccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCC
Confidence 788888888888744445677888888888887765543 45667888888888887543 56677888888888888
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCc-hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIP-DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
|.+.+..+. +..+++|+.|++++|.+.+..+ ..+..+++|+.|++++|.+.+..|..+..+ ++|++|+|
T Consensus 383 n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l---------~~L~~L~l 452 (570)
T 2z63_A 383 NGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL---------SSLEVLKM 452 (570)
T ss_dssp CSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTC---------TTCCEEEC
T ss_pred Ccccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcC---------CcCcEEEC
Confidence 888755444 7888888888888888876554 467778888888888888887777666655 78888888
Q ss_pred cCCcCC-CcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 166 SGNALT-GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 166 s~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|++|++++|++++..|..+. ++|+.|++++|+++|
T Consensus 453 ~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 888887 46777888888888888888888877788888888888888888888877666555 678888888888888
Q ss_pred CcCc
Q 048796 243 PIPE 246 (555)
Q Consensus 243 ~~p~ 246 (555)
.+|.
T Consensus 533 ~~~~ 536 (570)
T 2z63_A 533 SCPR 536 (570)
T ss_dssp CTTT
T ss_pred CCcc
Confidence 7763
No 67
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.90 E-value=1e-22 Score=214.03 Aligned_cols=219 Identities=22% Similarity=0.230 Sum_probs=139.1
Q ss_pred CCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 6 NSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
++++|++|+|++|.|++. | ..+++|++|+|++|+|+++. +..+++|++|+|++|.+++. + ++.+++|++|+
T Consensus 40 ~l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HHTTCCEEECCSSCCCCC-TTGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred HcCCCCEEEccCCCcccC-hhhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 456677777777766653 3 23456666777776666542 44555666666666666643 2 56666666666
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc-----------
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL----------- 152 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~----------- 152 (555)
|++|++++. + +..+++|++|++++|++++. + +..+++|+.|++++|...+.++ +..+..+.
T Consensus 113 L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCccce
Confidence 666666643 2 55666666666666666542 2 4444555555555553222221 11111100
Q ss_pred -ccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh----
Q 048796 153 -VLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS---- 227 (555)
Q Consensus 153 -~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---- 227 (555)
.+..+++|+.|++++|.+++. .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+.
T Consensus 185 l~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~ 258 (457)
T 3bz5_A 185 LDVSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTT 258 (457)
T ss_dssp CCCTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCE
T ss_pred eccccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCE
Confidence 023457889999999998875 47888999999999999997 55 78899999999999999976554433
Q ss_pred -----cCCCEEEeccCCCCCCcC
Q 048796 228 -----LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 228 -----~~L~~L~ls~N~l~~~~p 245 (555)
.+|+.|++++|.+.+.+|
T Consensus 259 L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 259 LHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp EECTTCCCSCCCCTTCTTCCEEE
T ss_pred EeccCCCCCEEECCCCccCCccc
Confidence 145666677777666665
No 68
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.90 E-value=1.8e-22 Score=212.05 Aligned_cols=202 Identities=23% Similarity=0.223 Sum_probs=157.5
Q ss_pred CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEE
Q 048796 27 SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTL 106 (555)
Q Consensus 27 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 106 (555)
.+++|++|+|++|.|++.+ .+..+++|++|+|++|.+++. + ++.+++|++|+|++|.+++. + +..+++|++|
T Consensus 40 ~l~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L 111 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDMT--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL 111 (457)
T ss_dssp HHTTCCEEECCSSCCCCCT--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred HcCCCCEEEccCCCcccCh--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE
Confidence 4789999999999999874 467788999999999999964 4 88999999999999999975 3 8899999999
Q ss_pred EcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccc-------------ccCCCCCcCEEEccCCcCCCc
Q 048796 107 DVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELL-------------VLPSYPPMESLDLSGNALTGV 173 (555)
Q Consensus 107 ~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~-------------~l~~~~~L~~L~Ls~N~l~~~ 173 (555)
++++|++++ ++ +..+++|+.|++++|.+++. + ++.+..+. .+..+++|++|++++|.+++.
T Consensus 112 ~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l 185 (457)
T 3bz5_A 112 NCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL 185 (457)
T ss_dssp ECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCC
T ss_pred ECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcccee
Confidence 999999986 44 88999999999999999974 2 33332211 234567778888888888763
Q ss_pred CCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCcCcccc
Q 048796 174 LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 174 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
| +..+++|+.|++++|.+++. .+..+++|+.|++++|++++ +|-.-.++|+.|++++|++++..+..+.
T Consensus 186 -~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l~~N~l~~~~~~~l~ 254 (457)
T 3bz5_A 186 -D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-IDVTPLTQLTYFDCSVNPLTELDVSTLS 254 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSCCCCTTCT
T ss_pred -c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cCccccCCCCEEEeeCCcCCCcCHHHCC
Confidence 3 67777888888888888764 36777888888888888886 4522126788888888888876544433
No 69
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.90 E-value=1.2e-22 Score=214.54 Aligned_cols=216 Identities=25% Similarity=0.317 Sum_probs=126.8
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++++|++|+|++|.+++..+ ..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++..+ +..+++|++|++
T Consensus 66 ~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 66 YLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp GCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred hhcCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 46778888888888876543 456677788888888876655 6667778888888888775432 677777888888
Q ss_pred eCCcCCCCCc-------------------hhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCc
Q 048796 85 RNNSVTGTLP-------------------SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRS 145 (555)
Q Consensus 85 ~~N~l~~~~~-------------------~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 145 (555)
++|.+.+... ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..+ +
T Consensus 142 ~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 217 (466)
T 1o6v_A 142 SSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--L 217 (466)
T ss_dssp EEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--c
Confidence 8777764311 1245566777777777777632 236677777777777777765543 2
Q ss_pred cccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChh
Q 048796 146 SHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK 225 (555)
Q Consensus 146 ~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 225 (555)
..+ ++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+-.
T Consensus 218 ~~l---------~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~ 284 (466)
T 1o6v_A 218 GIL---------TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLA 284 (466)
T ss_dssp GGC---------TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGT
T ss_pred ccc---------CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccccc
Confidence 222 4455555555554432 234444555555555555543322 444445555555555544332211
Q ss_pred hhcCCCEEEeccCCCCC
Q 048796 226 LSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 226 ~~~~L~~L~ls~N~l~~ 242 (555)
..++|+.|++++|.+++
T Consensus 285 ~l~~L~~L~L~~n~l~~ 301 (466)
T 1o6v_A 285 GLTALTNLELNENQLED 301 (466)
T ss_dssp TCTTCSEEECCSSCCSC
T ss_pred CCCccCeEEcCCCcccC
Confidence 11444444444444444
No 70
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.90 E-value=1.3e-23 Score=222.80 Aligned_cols=202 Identities=25% Similarity=0.235 Sum_probs=174.4
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEE
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLD 107 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 107 (555)
+++|++|+|++|.|++..+..+..+++|+.|+|++|.+++..+ +..+++|++|+|++|.|++..+ .++|+.|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 4589999999999999988889999999999999999987665 8999999999999999985432 38999999
Q ss_pred cCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCcccc-Cccccce
Q 048796 108 VSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG-NMGRLRL 186 (555)
Q Consensus 108 L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~ 186 (555)
|++|.|++..+. .+++|+.|+|++|.+++..|..++.+ ++|+.|+|++|.|++..|..+. .+++|+.
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~ 173 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCR---------SRVQYLDLKLNEIDTVNFAELAASSDTLEH 173 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGG---------SSEEEEECTTSCCCEEEGGGGGGGTTTCCE
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCC---------CCCCEEECCCCCCCCcChHHHhhhCCcccE
Confidence 999999976554 45789999999999999888877776 8999999999999998888886 7999999
Q ss_pred eecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCC
Q 048796 187 LNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFP 252 (555)
Q Consensus 187 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~ 252 (555)
|+|++|.|++. + .+..+++|+.|+|++|.|++..|. +. ++|+.|++++|.+++ +|..+..++
T Consensus 174 L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~ 237 (487)
T 3oja_A 174 LNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (487)
T ss_dssp EECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred EecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCC
Confidence 99999999976 3 344689999999999999976665 44 799999999999996 566554443
No 71
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.90 E-value=4.2e-24 Score=214.00 Aligned_cols=222 Identities=25% Similarity=0.249 Sum_probs=183.7
Q ss_pred CCCCEEECCCCcCCCCCC---CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLP---TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
..++.++++.+++...+. ..+++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+ +..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 457777888887763322 345689999999999999888888999999999999999986554 899999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.+++.. ..++|++|++++|++++..+. .+++|+.|++++|.+++..+..+..+ ++|++|+
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l---------~~L~~L~ 150 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCR---------SRVQYLD 150 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGG---------SSEEEEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhcc---------CCCCEEE
Confidence 999998533 348999999999999865444 36789999999999998777777766 8999999
Q ss_pred ccCCcCCCcCCcccc-CccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCC
Q 048796 165 LSGNALTGVLPSDIG-NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLS 241 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~ 241 (555)
|++|.+++..+..+. .+++|+.|+|++|.|++. + ....+++|++|+|++|++++..+. +. ++|+.|++++|.++
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc
Confidence 999999988777764 789999999999999865 3 334589999999999999965554 54 89999999999999
Q ss_pred CCcCccccCCC
Q 048796 242 GPIPENLRNFP 252 (555)
Q Consensus 242 ~~~p~~l~~~~ 252 (555)
. +|..+..++
T Consensus 228 ~-l~~~~~~l~ 237 (317)
T 3o53_A 228 L-IEKALRFSQ 237 (317)
T ss_dssp E-ECTTCCCCT
T ss_pred c-hhhHhhcCC
Confidence 4 565554443
No 72
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.2e-22 Score=194.47 Aligned_cols=180 Identities=20% Similarity=0.225 Sum_probs=163.9
Q ss_pred CCCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.+.++++++++.++ .+|.. .++++.|+|++|+|++..+..+..+++|++|+|++|.|++..+..|..+++|++|+|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCCeEEecCCCCcc-ccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 46889999999998 45544 46899999999999999888899999999999999999988888899999999999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+++..+..+..+ ++|++|+|+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~L~ 163 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL---------TNLQTLSLS 163 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECC
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcC---------cCCCEEECC
Confidence 99998888899999999999999999997777778899999999999999997777667666 899999999
Q ss_pred CCcCCCcCCccccCccccceeecccccccCC
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGK 197 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 197 (555)
+|.|++..+..|..+++|+.|+|++|.++..
T Consensus 164 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 164 TNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999988888999999999999999999864
No 73
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.1e-23 Score=210.33 Aligned_cols=181 Identities=23% Similarity=0.262 Sum_probs=84.3
Q ss_pred CccEEEccCCcCCCCCCccc--cCCCCccEEEeeCCcCCCCCc----hhccCCCCccEEEcCCCcCCCCCchhhhCCCCC
Q 048796 54 NLEILDLSSNKLSGSLPNLT--SQFDRLSTFNIRNNSVTGTLP----SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL 127 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 127 (555)
+|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..+..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 35555555555555555444 455555555555555554322 222345555555555555554444455555555
Q ss_pred CeEEccCCccccc--CCcCccccccccccCCCCCcCEEEccCCcCCCcCC--c-cccCccccceeecccccccCCCchhc
Q 048796 128 TNLNLSGNGFSGA--IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLP--S-DIGNMGRLRLLNLANNHLSGKMPSEL 202 (555)
Q Consensus 128 ~~L~Ls~N~l~~~--~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p--~-~~~~l~~L~~L~L~~N~l~~~~~~~~ 202 (555)
++|+|++|++.+. ++... .+..+++|++|+|++|.++...+ . .+..+++|++|+|++|.|++..|..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~-------~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAAL-------CPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTS-------CTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred CEEECCCCCCccchhhhHHH-------hhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 5555555554321 10000 01112455555555555542111 0 12344555555555555554444444
Q ss_pred cCC---CCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 203 SKL---GALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 203 ~~l---~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
..+ ++|++|+|++|+|+ .+|..+.++|+.|++++|++++
T Consensus 245 ~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 245 PRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp SSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred HhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 433 35555555555555 3344333455555555555554
No 74
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.89 E-value=4.7e-23 Score=222.21 Aligned_cols=229 Identities=16% Similarity=0.148 Sum_probs=193.6
Q ss_pred CCCCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 7 STTLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
|+..-..++++|+++. +|. -.++|++|+|++|+|++..+..+..+++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 4 C~~~~~c~~~~~~l~~-ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDASGVCDGRSRSFTS-IPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTTSEEECTTSCCSS-CCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCCceEECCCCcccc-ccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 5556668999999984 554 45689999999999999888888999999999999999998888999999999999999
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCC-CCchhhhCCCCCCeEEccCCcccccCC-cCccccccccccCCCCCcCEE
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKG-PIPDNFFSSMALTNLNLSGNGFSGAIP-LRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L~~L 163 (555)
+|.+++..+..+..+++|++|+|++|++++ ..|..+..+++|+.|++++|.+.+.+| ..+..+ ++|++|
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l---------~~L~~L 153 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL---------TSLNEL 153 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC---------CEEEEE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc---------cccCee
Confidence 999998888889999999999999999986 356789999999999999998544444 456555 899999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCC--Chhh---hcCCCEEEeccC
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI--PDKL---SLKLNEFNVSYN 238 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~---~~~L~~L~ls~N 238 (555)
++++|.+++..|..+..+++|+.|+++.|.+.......+..+++|++|++++|.+++.. |..+ ..+|+.|++++|
T Consensus 154 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 154 EIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGS 233 (549)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESC
T ss_pred eccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceecccc
Confidence 99999999999999999999999999999987443333467899999999999999742 2111 257888888888
Q ss_pred CCCCCcC
Q 048796 239 DLSGPIP 245 (555)
Q Consensus 239 ~l~~~~p 245 (555)
.+++..+
T Consensus 234 ~l~~~~~ 240 (549)
T 2z81_A 234 VLTDESF 240 (549)
T ss_dssp EEEHHHH
T ss_pred ccchhHH
Confidence 8776544
No 75
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=3.8e-23 Score=206.02 Aligned_cols=211 Identities=18% Similarity=0.252 Sum_probs=168.0
Q ss_pred CCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
++..+.+..+.+++.+. ..+++|++|++++|.++... .+..+++|++|+|++|.+++..+ +..+++|++|+|++|
T Consensus 20 ~~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 20 NAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHHHTTCSSTTSEECHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHHHhCCCCcCceecHHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCC
Confidence 34445566677765333 35788999999999998654 35667889999999999985444 889999999999999
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
.+++. ..+..+++|++|+|++|++++ ++. +..+++|+.|++++|.+++..+ +..+ ++|++|+|++
T Consensus 96 ~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l---------~~L~~L~l~~ 160 (308)
T 1h6u_A 96 PLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGL---------TNLQYLSIGN 160 (308)
T ss_dssp CCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGC---------TTCCEEECCS
T ss_pred cCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCC---------CCccEEEccC
Confidence 99864 368889999999999999985 443 8889999999999999886543 3333 8899999999
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|++|++++|++++..+-.-.++|+.|++++|++++
T Consensus 161 n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 161 AQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred CcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeec
Confidence 99986543 8899999999999999986543 78899999999999999966542222789999999999975
No 76
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1e-22 Score=203.14 Aligned_cols=227 Identities=19% Similarity=0.169 Sum_probs=175.9
Q ss_pred CCCCCEEECCCCcCCCCCC------CCCCCCCEEEcCCCcCCCCCcccc--cCCCCccEEEccCCcCCCCCC----cccc
Q 048796 7 STTLSVLNLSSNSLSGTLP------TSLKSCVILDLSRNMISGDISDMQ--NWEANLEILDLSSNKLSGSLP----NLTS 74 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~------~~l~~L~~L~L~~N~l~~~~~~~~--~~~~~L~~L~Ls~N~l~~~~~----~~~~ 74 (555)
...++.|.+.++.++.... -.+++|++|+|++|.+++..+..+ ..+++|++|+|++|.+++..+ ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 3457888998888763211 124579999999999998877666 778899999999999997655 3446
Q ss_pred CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCC--Cc--hhhhCCCCCCeEEccCCcccccCCcCcccccc
Q 048796 75 QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGP--IP--DNFFSSMALTNLNLSGNGFSGAIPLRSSHASE 150 (555)
Q Consensus 75 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~--~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 150 (555)
.+++|++|+|++|.+.+..+..+..+++|++|+|++|++.+. ++ ..+..+++|++|+|++|.++.. +.....
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~--- 218 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAA--- 218 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHH---
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHH---
Confidence 789999999999999988888999999999999999998642 22 2236788999999999999632 211000
Q ss_pred ccccCCCCCcCEEEccCCcCCCcCCccccCc---cccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 151 LLVLPSYPPMESLDLSGNALTGVLPSDIGNM---GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 151 l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
.+..+++|++|+|++|.|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|++.......
T Consensus 219 --l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l 293 (310)
T 4glp_A 219 --LAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDEL 293 (310)
T ss_dssp --HHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSC
T ss_pred --HHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhC
Confidence 01223889999999999998888777776 69999999999999 5676664 7999999999999974221112
Q ss_pred cCCCEEEeccCCCCC
Q 048796 228 LKLNEFNVSYNDLSG 242 (555)
Q Consensus 228 ~~L~~L~ls~N~l~~ 242 (555)
++|+.|++++|+|+.
T Consensus 294 ~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 294 PEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSCEECSSTTTSC
T ss_pred CCccEEECcCCCCCC
Confidence 789999999999974
No 77
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.6e-22 Score=200.02 Aligned_cols=192 Identities=18% Similarity=0.256 Sum_probs=165.5
Q ss_pred cCCCCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.++++|++|++++|.++. ++ ..+++|++|+|++|++++..+ +..+++|++|+|++|.+++. ..+..+++|++|
T Consensus 38 ~~l~~L~~L~l~~~~i~~-l~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTT-IEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHHTCCEEECTTSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HHcCCcCEEEeeCCCccC-chhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 356789999999999985 34 357899999999999998766 77888999999999999853 368999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCE
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMES 162 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~ 162 (555)
+|++|.+++.. .+..+++|++|+|++|++++..+ +..+++|+.|+|++|.+++..+ +.. +++|+.
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~---------l~~L~~ 177 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LAN---------LSKLTT 177 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT---------CTTCCE
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcC---------CCCCCE
Confidence 99999999653 38999999999999999985433 8899999999999999986433 333 499999
Q ss_pred EEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 163 LDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 163 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
|+|++|.+++..+ +..+++|+.|+|++|++++.. .+..+++|+.|++++|.+++
T Consensus 178 L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 178 LKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred EECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 9999999997644 889999999999999999654 38899999999999999985
No 78
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.3e-23 Score=211.97 Aligned_cols=231 Identities=19% Similarity=0.214 Sum_probs=136.9
Q ss_pred CCCCEEECCCCcCCCCCCC--CCCCCCEEEcCCCcCCCC-CcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPT--SLKSCVILDLSRNMISGD-ISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~--~l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
.+|+.|++++|.+++..+. .+++|++|+|++|.+++. .+..+..+++|++|+|++|.+++..+..++.+++|++|+|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 4566666666666655443 245666777777766543 3445555666777777777666555666666677777777
Q ss_pred eCC-cCCCC-CchhccCCCCccEEEcCCC-cCCCC-CchhhhCCC-CCCeEEccCCc--cc-ccCCcCccccccccccCC
Q 048796 85 RNN-SVTGT-LPSLLEISPRLVTLDVSSN-QLKGP-IPDNFFSSM-ALTNLNLSGNG--FS-GAIPLRSSHASELLVLPS 156 (555)
Q Consensus 85 ~~N-~l~~~-~~~~l~~l~~L~~L~L~~N-~l~~~-~~~~~~~~~-~L~~L~Ls~N~--l~-~~~p~~~~~~~~l~~l~~ 156 (555)
++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|+.|+|++|. ++ +.++..+..+
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~-------- 221 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRC-------- 221 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHC--------
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhC--------
Confidence 776 45542 4455666667777777776 66532 355566666 67777777663 33 2222222222
Q ss_pred CCCcCEEEccCCc-CCCcCCccccCccccceeeccccc-ccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEE
Q 048796 157 YPPMESLDLSGNA-LTGVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFN 234 (555)
Q Consensus 157 ~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ 234 (555)
++|++|+|++|. +++..+..+..+++|+.|+|++|. +.......+..+++|+.|++++| ++...-..+...+..|+
T Consensus 222 -~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~ 299 (336)
T 2ast_B 222 -PNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQ 299 (336)
T ss_dssp -TTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSE
T ss_pred -CCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceE
Confidence 667777777776 555555666667777777777764 22222224566677777777766 33222222223466666
Q ss_pred eccCCCCCCcCccc
Q 048796 235 VSYNDLSGPIPENL 248 (555)
Q Consensus 235 ls~N~l~~~~p~~l 248 (555)
+++|++++..|..+
T Consensus 300 l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 300 INCSHFTTIARPTI 313 (336)
T ss_dssp ESCCCSCCTTCSSC
T ss_pred EecccCccccCCcc
Confidence 77777776666544
No 79
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=2.5e-22 Score=192.56 Aligned_cols=195 Identities=17% Similarity=0.194 Sum_probs=167.5
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCc-CCCCCcccccCCCCccEEEccC-CcCCCCCCccccCCCCccEE
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNM-ISGDISDMQNWEANLEILDLSS-NKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~-l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L 82 (555)
.+|++|+|++|+|++..+. .+++|++|+|++|+ ++.+.+..|..+++|++|+|++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 4799999999999976554 45789999999997 9988888899999999999999 99997777889999999999
Q ss_pred EeeCCcCCCCCchhccCCCCcc---EEEcCCC-cCCCCCchhhhCCCCCC-eEEccCCcccccCCcCccccccccccCCC
Q 048796 83 NIRNNSVTGTLPSLLEISPRLV---TLDVSSN-QLKGPIPDNFFSSMALT-NLNLSGNGFSGAIPLRSSHASELLVLPSY 157 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~---~L~L~~N-~l~~~~~~~~~~~~~L~-~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~ 157 (555)
+|++|.+++ +|. +..+++|+ .|++++| ++++..+..|..+++|+ .|++++|.++ .+|......
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~--------- 178 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNG--------- 178 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTT---------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCC---------
Confidence 999999996 555 88888888 9999999 99876667799999999 9999999998 455433222
Q ss_pred CCcCEEEccCCc-CCCcCCccccCc-cccceeecccccccCCCchhccCCCCCCEEeCCCCc
Q 048796 158 PPMESLDLSGNA-LTGVLPSDIGNM-GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQ 217 (555)
Q Consensus 158 ~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 217 (555)
++|+.|+|++|. +++..+..|..+ ++|+.|+|++|+|++. |.. .+++|+.|+++++.
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 689999999995 998888889999 9999999999999954 433 67899999998874
No 80
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3.4e-24 Score=220.71 Aligned_cols=230 Identities=20% Similarity=0.234 Sum_probs=177.9
Q ss_pred CCCCCCEEECCCCcCCCCC-------CCCCCCCCEEEcCCCcCCC---CCccc-------ccCCCCccEEEccCCcCCC-
Q 048796 6 NSTTLSVLNLSSNSLSGTL-------PTSLKSCVILDLSRNMISG---DISDM-------QNWEANLEILDLSSNKLSG- 67 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~-------~~~l~~L~~L~L~~N~l~~---~~~~~-------~~~~~~L~~L~Ls~N~l~~- 67 (555)
++++|++|+|++|+|+... ...+++|++|+|++|.+.. ..+.. +..+++|++|+|++|.+++
T Consensus 30 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 109 (386)
T 2ca6_A 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 109 (386)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHH
Confidence 5678999999999988642 2357789999999975543 22222 3567889999999999986
Q ss_pred ---CCCccccCCCCccEEEeeCCcCCCCCchhc----cCC---------CCccEEEcCCCcCC-CCCc---hhhhCCCCC
Q 048796 68 ---SLPNLTSQFDRLSTFNIRNNSVTGTLPSLL----EIS---------PRLVTLDVSSNQLK-GPIP---DNFFSSMAL 127 (555)
Q Consensus 68 ---~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l----~~l---------~~L~~L~L~~N~l~-~~~~---~~~~~~~~L 127 (555)
.++..+..+++|++|+|++|.++...+..+ ..+ ++|++|+|++|+++ +.++ ..+..+++|
T Consensus 110 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 189 (386)
T 2ca6_A 110 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 189 (386)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc
Confidence 467778889999999999999975444333 333 89999999999997 3344 467788899
Q ss_pred CeEEccCCcccc-----cCCcCccccccccccCCCCCcCEEEccCCcCC----CcCCccccCccccceeecccccccCC-
Q 048796 128 TNLNLSGNGFSG-----AIPLRSSHASELLVLPSYPPMESLDLSGNALT----GVLPSDIGNMGRLRLLNLANNHLSGK- 197 (555)
Q Consensus 128 ~~L~Ls~N~l~~-----~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~- 197 (555)
+.|+|++|.++. ..+..+..+ ++|++|+|++|.++ ..+|..+..+++|+.|+|++|.|++.
T Consensus 190 ~~L~L~~n~l~~~g~~~l~~~~l~~~---------~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 260 (386)
T 2ca6_A 190 HTVKMVQNGIRPEGIEHLLLEGLAYC---------QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG 260 (386)
T ss_dssp CEEECCSSCCCHHHHHHHHHTTGGGC---------TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH
T ss_pred CEEECcCCCCCHhHHHHHHHHHhhcC---------CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhh
Confidence 999999998872 223244444 88999999999996 56677888899999999999999865
Q ss_pred ---Cchhcc--CCCCCCEEeCCCCcCCC----CCChhh-h--cCCCEEEeccCCCCCCc
Q 048796 198 ---MPSELS--KLGALEYLDLSGNQFKG----EIPDKL-S--LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 198 ---~~~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~--~~L~~L~ls~N~l~~~~ 244 (555)
++..+. .+++|+.|+|++|.|++ .+|..+ . ++|+.|++++|++++..
T Consensus 261 ~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 261 AAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 456663 38999999999999997 477666 2 78999999999998654
No 81
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.88 E-value=1.6e-21 Score=211.29 Aligned_cols=218 Identities=29% Similarity=0.358 Sum_probs=116.6
Q ss_pred CCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
++|++|+|++|+|+ .+|..+++|++|+|++|+|+.++. .+++|++|+|++|.|++ +|. .+++|+.|+|++|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N 131 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPALPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGN 131 (622)
T ss_dssp TTCSEEEECSCCCS-CCCCCCTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSS
T ss_pred CCCcEEEecCCCCC-CCCCcCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCC
Confidence 34555555555555 334445555555555555554332 23445555555555542 222 2334444444444
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCCCCchhh-----------------hCCCCCCeEEccCCcccccCCcCcccccc
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNF-----------------FSSMALTNLNLSGNGFSGAIPLRSSHASE 150 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-----------------~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~ 150 (555)
+|+. +|.. +++|++|+|++|++++ +|..+ ..+++|+.|+|++|.+++ +|..+..+..
T Consensus 132 ~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~ 205 (622)
T 3g06_A 132 QLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYK 205 (622)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCE
T ss_pred CCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhE
Confidence 4442 2211 2444444444444442 11111 123566667777776664 3322222221
Q ss_pred cc-------cc-CCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCC
Q 048796 151 LL-------VL-PSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI 222 (555)
Q Consensus 151 l~-------~l-~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 222 (555)
+. .+ ..+++|+.|+|++|.|++ +| ..+++|+.|+|++|.|+. +|. .+++|+.|+|++|+|+ .+
T Consensus 206 L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~l 276 (622)
T 3g06_A 206 LWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RL 276 (622)
T ss_dssp EECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SC
T ss_pred EECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cC
Confidence 11 00 022567777777777775 33 345677777777777773 444 4577788888888877 55
Q ss_pred Chhhh--cCCCEEEeccCCCCCCcCcccc
Q 048796 223 PDKLS--LKLNEFNVSYNDLSGPIPENLR 249 (555)
Q Consensus 223 p~~~~--~~L~~L~ls~N~l~~~~p~~l~ 249 (555)
|..+. ++|+.|++++|++++.+|..+.
T Consensus 277 p~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 277 PESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp CGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred CHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 66555 6778888888888777766544
No 82
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.88 E-value=4.2e-21 Score=201.47 Aligned_cols=199 Identities=30% Similarity=0.357 Sum_probs=86.9
Q ss_pred CCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
|++|++++|.+++ +|+.+++|++|++++|+++++.. ..++|++|+|++|.+++ +| .++++++|++|++++|++
T Consensus 93 L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l 165 (454)
T 1jl5_A 93 LESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSD----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSL 165 (454)
T ss_dssp CSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCS----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCC
T ss_pred CCEEEccCCcCCc-cccccCCCcEEECCCCccCcccC----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcC
Confidence 4444444444443 33333444444444444443221 01244444444444443 33 244444444444444444
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA 169 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~ 169 (555)
++ +|..+ .+|++|++++|++++ +| .+..+++|+.|++++|.+++ +|.. .++|++|++++|.
T Consensus 166 ~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~------------~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 166 KK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL------------PLSLESIVAGNNI 226 (454)
T ss_dssp SC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC------------CTTCCEEECCSSC
T ss_pred cc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC------------cCcccEEECcCCc
Confidence 43 22211 244444444444443 23 34444445555555554442 1110 0344555555555
Q ss_pred CCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCC
Q 048796 170 LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSG 242 (555)
Q Consensus 170 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~ 242 (555)
++ .+| .+..+++|+.|++++|++++ +|. .+++|+.|++++|++++ +|... .+|+.|++++|.+++
T Consensus 227 l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~---~~~~L~~L~l~~N~l~~-l~~~~-~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 227 LE-ELP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTD-LPELP-QSLTFLDVSENIFSG 291 (454)
T ss_dssp CS-SCC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSC-CCCCC-TTCCEEECCSSCCSE
T ss_pred CC-ccc-ccCCCCCCCEEECCCCcCCc-ccc---cccccCEEECCCCcccc-cCccc-CcCCEEECcCCccCc
Confidence 55 233 24555555555555555553 222 12445555555555553 22211 345555555555554
No 83
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.5e-21 Score=182.89 Aligned_cols=182 Identities=17% Similarity=0.139 Sum_probs=137.5
Q ss_pred CCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
-+.++++++.++.......++|++|+|++|+++++.+..+..+++|++|+|++|.+++..+..|..+++|++|+|++|++
T Consensus 9 ~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 88 (208)
T 2o6s_A 9 GTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88 (208)
T ss_dssp TTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcC
Confidence 36778888888744434456788888888888877777777778888888888888866666778888888888888888
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA 169 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~ 169 (555)
++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++|+|++|.
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---------~~L~~L~l~~N~ 159 (208)
T 2o6s_A 89 QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL---------TSLQYIWLHDNP 159 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC---------TTCCEEECCSCC
T ss_pred CccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC---------CCccEEEecCCC
Confidence 87666677888888888888888886666667778888888888888876555445444 777888888887
Q ss_pred CCCcCCccccCccccceeecccccccCCCchhccCCCC
Q 048796 170 LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGA 207 (555)
Q Consensus 170 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 207 (555)
+.+ .++.|+.|++..|.++|.+|..++.++.
T Consensus 160 ~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 160 WDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp BCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 663 3456777888888888777777766554
No 84
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.87 E-value=5.5e-21 Score=200.59 Aligned_cols=209 Identities=26% Similarity=0.336 Sum_probs=118.7
Q ss_pred CCCCEEECCCCcCCCCCC--CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 8 TTLSVLNLSSNSLSGTLP--TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
++|++|+|++|++++ +| ..+++|++|++++|++++++.. ..+|++|+|++|.+++ +| .+.++++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKKLPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcccCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 578888888888875 55 2345677888888888764322 2368888888888875 45 47778888888888
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccc-------c-CCC
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV-------L-PSY 157 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~-------l-~~~ 157 (555)
+|.+++ +|.. .++|++|++++|+++ .+| .+..+++|+.|++++|.+++ +|.....+..+.. + ...
T Consensus 204 ~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~l~~~~ 276 (454)
T 1jl5_A 204 NNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTDLPELP 276 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSCCCCCC
T ss_pred CCcCCc-CCCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccccCccc
Confidence 888775 3322 246777777777776 555 36677777777777777764 3322211111100 0 012
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCC-CCCCEEeCCCCcCCCCCChhhhcCCCEEEec
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKL-GALEYLDLSGNQFKGEIPDKLSLKLNEFNVS 236 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls 236 (555)
++|+.|++++|.+++.. . + .++|+.|++++|.+++. ..+ ++|+.|++++|++++ +|..+ ++|+.|+++
T Consensus 277 ~~L~~L~ls~N~l~~l~-~-~--~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~~-~~L~~L~L~ 345 (454)
T 1jl5_A 277 QSLTFLDVSENIFSGLS-E-L--PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPALP-PRLERLIAS 345 (454)
T ss_dssp TTCCEEECCSSCCSEES-C-C--CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCCC-TTCCEEECC
T ss_pred CcCCEEECcCCccCccc-C-c--CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-ccccC-CcCCEEECC
Confidence 44555555555555421 0 0 12344444444444321 111 355555555555553 33222 455555555
Q ss_pred cCCCC
Q 048796 237 YNDLS 241 (555)
Q Consensus 237 ~N~l~ 241 (555)
+|.++
T Consensus 346 ~N~l~ 350 (454)
T 1jl5_A 346 FNHLA 350 (454)
T ss_dssp SSCCS
T ss_pred CCccc
Confidence 55555
No 85
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=5.4e-21 Score=204.68 Aligned_cols=185 Identities=28% Similarity=0.417 Sum_probs=146.4
Q ss_pred CCCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.+|+.|+|++|+|++ +|. .+++|++|+|++|+|+.++ ..+++|+.|+|++|.|++ +|. +.. +|++|+|++
T Consensus 59 ~~L~~L~Ls~n~L~~-lp~~l~~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 59 NQFSELQLNRLNLSS-LPDNLPPQITVLEITQNALISLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TTCSEEECCSSCCSC-CCSCCCTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CCccEEEeCCCCCCc-cCHhHcCCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 379999999999987 554 5678999999999998655 345789999999999986 666 555 899999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. +. ++|+.|+|+
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-----------~~L~~L~Ls 188 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-----------ESLEALDVS 188 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC-----------TTCCEEECC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh-----------CCCCEEECc
Confidence 99986 554 67889999999999985 555 56789999999999886 454 32 678999999
Q ss_pred CCcCCCcCCccccCcccc-------ceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh
Q 048796 167 GNALTGVLPSDIGNMGRL-------RLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS 227 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 227 (555)
+|.|+ .+|. |.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|.|++.+|..+.
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 251 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLS 251 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHH
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHH
Confidence 99998 4555 554 67 89999999998 5777777789999999999999888777655
No 86
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=1.7e-22 Score=206.21 Aligned_cols=229 Identities=21% Similarity=0.220 Sum_probs=173.3
Q ss_pred EEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCc----ccccCCC-CccEEEccCCcCCCCCCccccCC-----CC
Q 048796 12 VLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDIS----DMQNWEA-NLEILDLSSNKLSGSLPNLTSQF-----DR 78 (555)
Q Consensus 12 ~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~----~~~~~~~-~L~~L~Ls~N~l~~~~~~~~~~l-----~~ 78 (555)
.++|++|++++.+|. ..++|++|+|++|.|++... ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 578899999987774 33469999999999988775 6666777 89999999999997777777664 89
Q ss_pred ccEEEeeCCcCCCCCchhc----cCC-CCccEEEcCCCcCCCCCchhhhC-----CCCCCeEEccCCcccccCCcCcccc
Q 048796 79 LSTFNIRNNSVTGTLPSLL----EIS-PRLVTLDVSSNQLKGPIPDNFFS-----SMALTNLNLSGNGFSGAIPLRSSHA 148 (555)
Q Consensus 79 L~~L~L~~N~l~~~~~~~l----~~l-~~L~~L~L~~N~l~~~~~~~~~~-----~~~L~~L~Ls~N~l~~~~p~~~~~~ 148 (555)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|++++..+..+.. ..+|+.|+|++|.+++.....+...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999987766644 444 89999999999998666655443 3699999999999985443333211
Q ss_pred ccccccCCCC-CcCEEEccCCcCCCcCCcccc----Cc-cccceeecccccccCC----CchhccC-CCCCCEEeCCCCc
Q 048796 149 SELLVLPSYP-PMESLDLSGNALTGVLPSDIG----NM-GRLRLLNLANNHLSGK----MPSELSK-LGALEYLDLSGNQ 217 (555)
Q Consensus 149 ~~l~~l~~~~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~ 217 (555)
+..++ +|++|+|++|.+++..+..+. .+ ++|+.|+|++|.|++. ++..+.. .++|+.|||++|.
T Consensus 162 -----l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 236 (362)
T 3goz_A 162 -----LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236 (362)
T ss_dssp -----HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSC
T ss_pred -----HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCC
Confidence 11224 899999999999887765544 34 5899999999999863 3445544 4589999999999
Q ss_pred CCCCCChhhh------cCCCEEEeccCCCCCCcC
Q 048796 218 FKGEIPDKLS------LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 218 l~~~~p~~~~------~~L~~L~ls~N~l~~~~p 245 (555)
+++..+..+. .+|+.|++++|.+....+
T Consensus 237 l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 237 LHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp CCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred CCcHHHHHHHHHHhcCCCccEEEeccCCccccCH
Confidence 9976553322 679999999999765443
No 87
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=6.8e-21 Score=178.41 Aligned_cols=162 Identities=20% Similarity=0.238 Sum_probs=103.2
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~ 157 (555)
+|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..+..+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l--------- 99 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKL--------- 99 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCc---------
Confidence 44445555554444444444445555555555555543333334455555555555555554333333333
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEecc
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSY 237 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~ 237 (555)
++|++|+|++|.|++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+.+..| .|+.|+++.
T Consensus 100 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~L~~~~ 174 (208)
T 2o6s_A 100 TQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWI 174 (208)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-----TTHHHHHHH
T ss_pred cCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-----CHHHHHHHH
Confidence 666677777777776666667778888888888888887666667888888888888888876544 677888899
Q ss_pred CCCCCCcCccccCCCC
Q 048796 238 NDLSGPIPENLRNFPK 253 (555)
Q Consensus 238 N~l~~~~p~~l~~~~~ 253 (555)
|.++|.+|.++...+.
T Consensus 175 n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 175 NKHSGVVRNSAGSVAP 190 (208)
T ss_dssp HHCTTTBBCTTSSBCT
T ss_pred HhCCceeeccCccccC
Confidence 9999999887765543
No 88
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=8.1e-23 Score=208.56 Aligned_cols=235 Identities=22% Similarity=0.159 Sum_probs=179.6
Q ss_pred CCCCCEEECCCCcCCCCCC----C---CCC-CCCEEEcCCCcCCCCCcccccCC-----CCccEEEccCCcCCCCCCccc
Q 048796 7 STTLSVLNLSSNSLSGTLP----T---SLK-SCVILDLSRNMISGDISDMQNWE-----ANLEILDLSSNKLSGSLPNLT 73 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~----~---~l~-~L~~L~L~~N~l~~~~~~~~~~~-----~~L~~L~Ls~N~l~~~~~~~~ 73 (555)
.++|++|+|++|.|++..+ + .++ +|++|+|++|+|++.....+... ++|++|+|++|.+++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 4569999999999997655 2 356 89999999999998765444442 789999999999997766644
Q ss_pred c----CC-CCccEEEeeCCcCCCCCchhc----cC-CCCccEEEcCCCcCCCCCc----hhhhCCC-CCCeEEccCCccc
Q 048796 74 S----QF-DRLSTFNIRNNSVTGTLPSLL----EI-SPRLVTLDVSSNQLKGPIP----DNFFSSM-ALTNLNLSGNGFS 138 (555)
Q Consensus 74 ~----~l-~~L~~L~L~~N~l~~~~~~~l----~~-l~~L~~L~L~~N~l~~~~~----~~~~~~~-~L~~L~Ls~N~l~ 138 (555)
. .+ ++|++|+|++|.|++..+..+ .. .++|++|+|++|+++.... ..+..++ +|+.|+|++|.++
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 3 44 899999999999997766554 33 3699999999999985443 3445555 9999999999998
Q ss_pred ccCCcCccccccccccCCC-CCcCEEEccCCcCCCc----CCccccC-ccccceeecccccccCCCc----hhccCCCCC
Q 048796 139 GAIPLRSSHASELLVLPSY-PPMESLDLSGNALTGV----LPSDIGN-MGRLRLLNLANNHLSGKMP----SELSKLGAL 208 (555)
Q Consensus 139 ~~~p~~~~~~~~l~~l~~~-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L 208 (555)
+..+..++.. +..+ ++|++|+|++|.|++. ++..+.. .++|+.|+|++|.|++..+ ..+..+++|
T Consensus 181 ~~~~~~l~~~-----l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L 255 (362)
T 3goz_A 181 SKNCAELAKF-----LASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHL 255 (362)
T ss_dssp GSCHHHHHHH-----HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTC
T ss_pred hhhHHHHHHH-----HHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCc
Confidence 7665544332 2233 4899999999999974 3344544 4599999999999997655 334678999
Q ss_pred CEEeCCCCcCCCCCChhh-------h--cCCCEEEeccCCCCCCcCc
Q 048796 209 EYLDLSGNQFKGEIPDKL-------S--LKLNEFNVSYNDLSGPIPE 246 (555)
Q Consensus 209 ~~L~Ls~N~l~~~~p~~~-------~--~~L~~L~ls~N~l~~~~p~ 246 (555)
+.|+|++|.+.+..+..+ . .+|+.||+++|++....+.
T Consensus 256 ~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 256 QTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred cEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 999999999775444322 1 4688999999999876443
No 89
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.85 E-value=8.3e-20 Score=197.84 Aligned_cols=221 Identities=27% Similarity=0.365 Sum_probs=161.4
Q ss_pred CCCCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.+++.|++++|+|+ .+|.. .++|++|+|++|+|+.++. .+++|++|+|++|.|+ .+|. .+++|++|+|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLPAHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCCTTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CCCcEEEecCCCcC-ccChhhCCCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 36899999999999 56654 4689999999999997655 4578999999999998 4555 779999999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccc-------c-CCCC
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV-------L-PSYP 158 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~-------l-~~~~ 158 (555)
|.|++. |. .+++|+.|++++|+++. +|.. +++|++|+|++|.+++ +|..+..+..+.. + ..++
T Consensus 111 N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~ 181 (622)
T 3g06_A 111 NPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPS 181 (622)
T ss_dssp CCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCT
T ss_pred CcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCC
Confidence 999964 33 57899999999999984 5553 4899999999999985 3433333322210 0 1236
Q ss_pred CcCEEEccCCcCCCcCCcccc-----------------CccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 159 PMESLDLSGNALTGVLPSDIG-----------------NMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~-----------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
+|+.|+|++|.|++. |..+. .+++|+.|+|++|.|++ +| ..+++|+.|+|++|.|+.
T Consensus 182 ~L~~L~Ls~N~l~~l-~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~- 255 (622)
T 3g06_A 182 GLQELSVSDNQLASL-PTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS- 255 (622)
T ss_dssp TCCEEECCSSCCSCC-CCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCcEEECCCCCCCCC-CCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-
Confidence 777777777777752 22211 12567777777777775 44 455778888888888884
Q ss_pred CChhhhcCCCEEEeccCCCCCCcCccccCCCCC
Q 048796 222 IPDKLSLKLNEFNVSYNDLSGPIPENLRNFPKS 254 (555)
Q Consensus 222 ~p~~~~~~L~~L~ls~N~l~~~~p~~l~~~~~~ 254 (555)
+|. ..++|+.|++++|.|+ .+|..+..++..
T Consensus 256 lp~-~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L 286 (622)
T 3g06_A 256 LPM-LPSGLLSLSVYRNQLT-RLPESLIHLSSE 286 (622)
T ss_dssp CCC-CCTTCCEEECCSSCCC-SCCGGGGGSCTT
T ss_pred CCc-ccccCcEEeCCCCCCC-cCCHHHhhcccc
Confidence 444 3367888888888888 667766665543
No 90
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=2e-20 Score=189.85 Aligned_cols=225 Identities=16% Similarity=0.128 Sum_probs=180.3
Q ss_pred CCEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCC-ccccCCCCccE-EEeeC
Q 048796 10 LSVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLP-NLTSQFDRLST-FNIRN 86 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~-L~L~~ 86 (555)
-++++.++++|+ .+|..+ +++++|+|++|+|+.++++.|..+++|++|+|++|.+.+.++ .+|.++++|.+ +.+..
T Consensus 11 ~~~v~C~~~~Lt-~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 11 NRVFLCQESKVT-EIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TTEEEEESTTCC-SCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CCEEEecCCCCC-ccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 367899999998 667665 589999999999999888899999999999999999876554 57889998776 56778
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccC-CcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSG-NGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
|+|+...+..|..+++|++|++++|++....+..+....++..|++.+ |.+....+..+..+. ..++.|+|
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~--------~~l~~L~L 161 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------FESVILWL 161 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB--------SSCEEEEC
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc--------hhhhhhcc
Confidence 999988889999999999999999999876666777777888999866 566655455554441 46889999
Q ss_pred cCCcCCCcCCccccCccccceeeccc-ccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCEEEeccCCCCCCc
Q 048796 166 SGNALTGVLPSDIGNMGRLRLLNLAN-NHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 166 s~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N~l~~~~ 244 (555)
++|.|+.+.+..| ...+|+.|++.+ |.++...++.|.++++|+.|||++|+|+ .+|.....+|+.|.+.+++--..+
T Consensus 162 ~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~~l~~l 239 (350)
T 4ay9_X 162 NKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLKKL 239 (350)
T ss_dssp CSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCTTCCCC
T ss_pred ccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCCCcCcC
Confidence 9999996655555 557899999975 7777655567899999999999999999 455554568888887776544445
Q ss_pred C
Q 048796 245 P 245 (555)
Q Consensus 245 p 245 (555)
|
T Consensus 240 P 240 (350)
T 4ay9_X 240 P 240 (350)
T ss_dssp C
T ss_pred C
Confidence 5
No 91
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=5.4e-22 Score=200.15 Aligned_cols=221 Identities=21% Similarity=0.263 Sum_probs=181.3
Q ss_pred CCCCEEECCCCcCCCCCCCCC--CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCC-CCccccCCCCccEEEe
Q 048796 8 TTLSVLNLSSNSLSGTLPTSL--KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGS-LPNLTSQFDRLSTFNI 84 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L 84 (555)
..++.|++++|.+.......+ ++++.|++++|.+.+..+..+ .+++|++|+|++|.+++. ++..+..+++|++|+|
T Consensus 47 ~~~~~l~l~~~~~~~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~-~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 47 SLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHF-SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp TTSSEEECTTCBCCHHHHHHHHHTTCSEEECTTCEECSCCCSCC-CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred hhheeeccccccCCHHHHHhhhhccceEEEcCCccccccchhhc-cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 348899999999874333344 789999999999998877755 467899999999999865 7788899999999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCC-cCCC-CCchhhhCCCCCCeEEccCC-ccccc-CCcCccccccccccCCCC-C
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSN-QLKG-PIPDNFFSSMALTNLNLSGN-GFSGA-IPLRSSHASELLVLPSYP-P 159 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~-~~~~~~~~~~~L~~L~Ls~N-~l~~~-~p~~~~~~~~l~~l~~~~-~ 159 (555)
++|.+++..+..+..+++|++|+|++| .+++ .++..+..+++|+.|++++| .+++. ++..+..+ + +
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l---------~~~ 196 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHV---------SET 196 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHS---------CTT
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhc---------ccC
Confidence 999999888888999999999999999 6764 25667888999999999999 88753 34434444 7 9
Q ss_pred cCEEEccCC--cCC-CcCCccccCccccceeeccccc-ccCCCchhccCCCCCCEEeCCCCc-CCCCCChhhh--cCCCE
Q 048796 160 MESLDLSGN--ALT-GVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQ-FKGEIPDKLS--LKLNE 232 (555)
Q Consensus 160 L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~--~~L~~ 232 (555)
|++|+|++| .++ +.++..+..+++|+.|+|++|. +++..+..+..+++|+.|++++|. ++......+. ++|+.
T Consensus 197 L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 197 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 999999999 565 4556677889999999999999 777778889999999999999996 3222111333 78999
Q ss_pred EEeccC
Q 048796 233 FNVSYN 238 (555)
Q Consensus 233 L~ls~N 238 (555)
|++++|
T Consensus 277 L~l~~~ 282 (336)
T 2ast_B 277 LQVFGI 282 (336)
T ss_dssp EECTTS
T ss_pred EeccCc
Confidence 999998
No 92
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=3.6e-20 Score=198.32 Aligned_cols=185 Identities=26% Similarity=0.365 Sum_probs=155.3
Q ss_pred CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcC
Q 048796 30 SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 109 (555)
+|+.|+|++|+|++++..++ ++|+.|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 79999999999998665554 57999999999999 566 457999999999999997 666 654 99999999
Q ss_pred CCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeec
Q 048796 110 SNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNL 189 (555)
Q Consensus 110 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 189 (555)
+|+|++ +|. .+++|+.|+|++|.|++ +|. . +++|++|+|++|.|++ +|. |. ++|+.|+|
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~---------l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~L 187 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---L---------PTSLEVLSVRNNQLTF-LPE-LP--ESLEALDV 187 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---C---------CTTCCEEECCSSCCSC-CCC-CC--TTCCEEEC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---c---------CCCcCEEECCCCCCCC-cch-hh--CCCCEEEC
Confidence 999996 666 68999999999999986 453 2 2889999999999997 555 66 89999999
Q ss_pred ccccccCCCchhccCCCCC-------CEEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCC
Q 048796 190 ANNHLSGKMPSELSKLGAL-------EYLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 190 ~~N~l~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+. ++|+.|++++|+|++.+|..+..+
T Consensus 188 s~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 188 STNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 999999 5666 554 77 99999999999 5777665 799999999999999988776543
No 93
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.3e-20 Score=186.16 Aligned_cols=168 Identities=22% Similarity=0.298 Sum_probs=96.7
Q ss_pred CCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 52 EANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|++++ ++ .+..+++|+.|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 34456666666655532 2 24555666666666666654333 5556666666666666653 22 355566666666
Q ss_pred ccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEE
Q 048796 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYL 211 (555)
Q Consensus 132 Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (555)
|++|.+++. ..+.. +++|+.|+|++|.+++. ..+..+++|+.|+|++|.|++..+ +..+++|+.|
T Consensus 119 L~~n~i~~~--~~l~~---------l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L 183 (291)
T 1h6t_A 119 LEHNGISDI--NGLVH---------LPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNL 183 (291)
T ss_dssp CTTSCCCCC--GGGGG---------CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred CCCCcCCCC--hhhcC---------CCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEE
Confidence 666665532 11222 25666666666666654 456666667777777776665433 6666677777
Q ss_pred eCCCCcCCCCCChhhh--cCCCEEEeccCCCCC
Q 048796 212 DLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSG 242 (555)
Q Consensus 212 ~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~ 242 (555)
++++|.|++. +. +. ++|+.|++++|+++.
T Consensus 184 ~L~~N~i~~l-~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 184 YLSKNHISDL-RA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ECCSSCCCBC-GG-GTTCTTCSEEEEEEEEEEC
T ss_pred ECCCCcCCCC-hh-hccCCCCCEEECcCCcccC
Confidence 7777766643 32 22 567777777776654
No 94
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=1.1e-20 Score=204.52 Aligned_cols=193 Identities=21% Similarity=0.278 Sum_probs=148.4
Q ss_pred CCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEe
Q 048796 6 NSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNI 84 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 84 (555)
++.++..++|..+.++...+ ..+.+|+.|+|++|.|..+. .+..+++|+.|+|++|.|++..+ +..+++|+.|+|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEECHHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHHHhccCCCcccccchhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 34456666777777775544 34778888888888887654 35667788999999988886544 788888999999
Q ss_pred eCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEE
Q 048796 85 RNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLD 164 (555)
Q Consensus 85 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~ 164 (555)
++|.|.+. + .+..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|.+++. ..+. .+++|+.|+
T Consensus 95 s~N~l~~l-~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~---------~l~~L~~L~ 159 (605)
T 1m9s_A 95 DENKIKDL-S-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLS---------RLTKLDTLS 159 (605)
T ss_dssp CSSCCCCC-T-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGG---------SCTTCSEEE
T ss_pred cCCCCCCC-h-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhc---------ccCCCCEEE
Confidence 98888853 3 67888889999999888875 3 4578888889999988888754 2233 348888889
Q ss_pred ccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 165 LSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 165 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
|++|.|++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|.+++.
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 99888887655 88888889999998888864 3578888889999988888754
No 95
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.82 E-value=9.3e-22 Score=202.51 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=168.2
Q ss_pred cCCCCCCEEECCCCc---CCCCCC----------CCCCCCCEEEcCCCcCCCC----CcccccCCCCccEEEccCCcCCC
Q 048796 5 INSTTLSVLNLSSNS---LSGTLP----------TSLKSCVILDLSRNMISGD----ISDMQNWEANLEILDLSSNKLSG 67 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~---l~~~~~----------~~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~ 67 (555)
.++++|++|+|++|. +++.+| ..+++|++|+|++|.|+.. .+..+..+++|++|+|++|.+++
T Consensus 57 ~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 136 (386)
T 2ca6_A 57 ASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGP 136 (386)
T ss_dssp TTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHH
T ss_pred HhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCH
Confidence 468899999999974 444555 3568999999999999873 34566777899999999999975
Q ss_pred CCCccc----cCC---------CCccEEEeeCCcCC-CCCc---hhccCCCCccEEEcCCCcCCC-----CCchhhhCCC
Q 048796 68 SLPNLT----SQF---------DRLSTFNIRNNSVT-GTLP---SLLEISPRLVTLDVSSNQLKG-----PIPDNFFSSM 125 (555)
Q Consensus 68 ~~~~~~----~~l---------~~L~~L~L~~N~l~-~~~~---~~l~~l~~L~~L~L~~N~l~~-----~~~~~~~~~~ 125 (555)
..+..+ ..+ ++|++|+|++|+++ ..++ ..+..+++|++|+|++|+++. ..+..+..++
T Consensus 137 ~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~ 216 (386)
T 2ca6_A 137 QAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQ 216 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCT
T ss_pred HHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCC
Confidence 433333 334 89999999999997 3444 467788999999999999972 3344788899
Q ss_pred CCCeEEccCCccc----ccCCcCccccccccccCCCCCcCEEEccCCcCCCc----CCcccc--Cccccceeeccccccc
Q 048796 126 ALTNLNLSGNGFS----GAIPLRSSHASELLVLPSYPPMESLDLSGNALTGV----LPSDIG--NMGRLRLLNLANNHLS 195 (555)
Q Consensus 126 ~L~~L~Ls~N~l~----~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~L~~N~l~ 195 (555)
+|+.|+|++|.++ ..+|..+..+ ++|++|+|++|.|++. ++..+. .+++|+.|+|++|.|+
T Consensus 217 ~L~~L~Ls~n~l~~~g~~~l~~~l~~~---------~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 217 ELKVLDLQDNTFTHLGSSALAIALKSW---------PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp TCCEEECCSSCCHHHHHHHHHHHGGGC---------TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred CccEEECcCCCCCcHHHHHHHHHHccC---------CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 9999999999996 4455555544 8999999999999876 455563 4899999999999999
Q ss_pred C----CCchhc-cCCCCCCEEeCCCCcCCCCCC
Q 048796 196 G----KMPSEL-SKLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 196 ~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~p 223 (555)
+ .+|..+ .++++|++|++++|.+++..+
T Consensus 288 ~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 288 LDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 7 477777 668999999999999998775
No 96
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=5e-20 Score=187.75 Aligned_cols=178 Identities=25% Similarity=0.223 Sum_probs=117.8
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCcccc-CCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTS-QFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS 110 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 110 (555)
+.+++++|+|+.++..+. ..|+.|+|++|.|++..+..+. .+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSSCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666665544332 2466666666666655555555 666777777777777666556666677777777777
Q ss_pred CcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccc---cCcccccee
Q 048796 111 NQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDI---GNMGRLRLL 187 (555)
Q Consensus 111 N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L 187 (555)
|+|+...+..|..+.+|+.|+|++|.|++..+..|..+ ++|+.|+|++|.|++..+..| ..+++|+.|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l---------~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L 168 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDM---------AQLQKLYLSQNQISRFPVELIKDGNKLPKLMLL 168 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC---------TTCCEEECCSSCCCSCCGGGTC----CTTCCEE
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCc---------ccCCEEECCCCcCCeeCHHHhcCcccCCcCCEE
Confidence 77765555566667777777777777766555555554 677777777777776544444 457788888
Q ss_pred ecccccccCCCchhccCCCC--CCEEeCCCCcCCCC
Q 048796 188 NLANNHLSGKMPSELSKLGA--LEYLDLSGNQFKGE 221 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~~ 221 (555)
+|++|+|+...+..+..++. |+.|+|++|.+...
T Consensus 169 ~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 169 DLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp ECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 88888888666667777766 47788888888743
No 97
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.82 E-value=6.2e-22 Score=208.61 Aligned_cols=229 Identities=19% Similarity=0.157 Sum_probs=133.8
Q ss_pred cCCCCCCEEECCCCcCCCCCC--------CCCCCCCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCCCCCcc
Q 048796 5 INSTTLSVLNLSSNSLSGTLP--------TSLKSCVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSGSLPNL 72 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~--------~~l~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~~~~~ 72 (555)
.++++|++|+|++|.+++..+ ...++|++|+|++|++++.. +..+..+++|++|+|++|.+++..+..
T Consensus 110 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 189 (461)
T 1z7x_W 110 RTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRV 189 (461)
T ss_dssp TSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHH
T ss_pred ccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHH
Confidence 466788888888888764222 22446888888888877543 334445567888888887776433333
Q ss_pred cc-----CCCCccEEEeeCCcCCCC----CchhccCCCCccEEEcCCCcCCCCC-----chhhhCCCCCCeEEccCCccc
Q 048796 73 TS-----QFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQLKGPI-----PDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 73 ~~-----~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~-----~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+. .+++|++|+|++|.++.. ++..+..+++|++|+|++|.++... +..+..+++|+.|++++|.++
T Consensus 190 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~ 269 (461)
T 1z7x_W 190 LCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGIT 269 (461)
T ss_dssp HHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 32 245777777777777653 3555666777777777777765322 111224667777777777766
Q ss_pred cc----CCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccC-----ccccceeecccccccCC----CchhccCC
Q 048796 139 GA----IPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN-----MGRLRLLNLANNHLSGK----MPSELSKL 205 (555)
Q Consensus 139 ~~----~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~~~~~~~l 205 (555)
.. ++..+..+ ++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++..+..+
T Consensus 270 ~~~~~~l~~~l~~~---------~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 340 (461)
T 1z7x_W 270 AKGCGDLCRVLRAK---------ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQN 340 (461)
T ss_dssp HHHHHHHHHHHHHC---------TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC---------CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhC
Confidence 43 22222222 56666666666665433333322 14666666666666543 33444555
Q ss_pred CCCCEEeCCCCcCCCCCChhhh-------cCCCEEEeccCCCCC
Q 048796 206 GALEYLDLSGNQFKGEIPDKLS-------LKLNEFNVSYNDLSG 242 (555)
Q Consensus 206 ~~L~~L~Ls~N~l~~~~p~~~~-------~~L~~L~ls~N~l~~ 242 (555)
++|++|++++|.+++..+..+. ++|+.|++++|.+++
T Consensus 341 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 341 RFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp SSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred CCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 6666666666666544333222 256666666666654
No 98
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=4.8e-20 Score=174.23 Aligned_cols=135 Identities=20% Similarity=0.279 Sum_probs=73.5
Q ss_pred cEEEeeCCcCCCCCc-hhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 80 STFNIRNNSVTGTLP-SLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 80 ~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
++|+|++|.|++..+ ..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..+..+..+ +
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~ 105 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGL---------E 105 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTC---------S
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCC---------c
Confidence 344444444443322 223444444444444444443333344444444444444444444333333333 5
Q ss_pred CcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCC
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIP 223 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 223 (555)
+|++|+|++|.|++..|..|..+++|+.|+|++|.|++..|..|..+++|+.|+|++|.+++..+
T Consensus 106 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 106 SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 55555666666665556666667777777777777776667777777777777777777775544
No 99
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=7e-20 Score=173.08 Aligned_cols=135 Identities=22% Similarity=0.295 Sum_probs=77.7
Q ss_pred CccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCC
Q 048796 78 RLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSY 157 (555)
Q Consensus 78 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~ 157 (555)
+|++|+|++|.|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.|+...+..|..+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l--------- 103 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGL--------- 103 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTC---------
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCC---------
Confidence 44444444444444333444444445555555554444444444445555555555555543333333333
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
++|++|+|++|.|++..|..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|.+...
T Consensus 104 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 104 FSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 5666666666666666666677777777777777777766666677777777777777777643
No 100
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=6.7e-20 Score=186.75 Aligned_cols=178 Identities=24% Similarity=0.217 Sum_probs=139.5
Q ss_pred ccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhcc-CCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 55 LEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLE-ISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 55 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
-+.+++++|.++ .+|..+. ..++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 467888888888 4565443 4588899999998877777777 88899999999999887777788888899999999
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhc---cCCCCCCE
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSEL---SKLGALEY 210 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~ 210 (555)
+|.|+...+..|..+ ++|++|+|++|.|++..+..|..+++|+.|+|++|.|++..+..| ..+++|+.
T Consensus 97 ~N~l~~~~~~~~~~l---------~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~ 167 (361)
T 2xot_A 97 SNHLHTLDEFLFSDL---------QALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLML 167 (361)
T ss_dssp SSCCCEECTTTTTTC---------TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCE
T ss_pred CCcCCcCCHHHhCCC---------cCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCE
Confidence 998887666666655 888999999999988888888888999999999999986555555 56888999
Q ss_pred EeCCCCcCCCCCChhhh--cC--CCEEEeccCCCCCCc
Q 048796 211 LDLSGNQFKGEIPDKLS--LK--LNEFNVSYNDLSGPI 244 (555)
Q Consensus 211 L~Ls~N~l~~~~p~~~~--~~--L~~L~ls~N~l~~~~ 244 (555)
|||++|+|+...+..+. +. ++.|++++|++.|.+
T Consensus 168 L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 168 LDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp EECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred EECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 99999998855444444 22 477899999988764
No 101
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=2.8e-19 Score=168.89 Aligned_cols=152 Identities=20% Similarity=0.190 Sum_probs=86.2
Q ss_pred EEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCC-ccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLP-NLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 33 ~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
.+++++|.++.++..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSSCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcccCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 44555555544332221 134555555555554422 33455555555555555555555555555566666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
++++..+..|..+++|+.|+|++|.|++..|..+..+ ++|++|+|++|.|++..|..|..+++|+.|+|++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 162 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGL---------SSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLA 162 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTC---------TTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCC---------ccCCEEECCCCcCCEECHHHhcCCCCCCEEEecC
Confidence 6655555555556666666666666665555555444 5666666666666666666666667777777777
Q ss_pred ccccC
Q 048796 192 NHLSG 196 (555)
Q Consensus 192 N~l~~ 196 (555)
|.+..
T Consensus 163 N~l~c 167 (220)
T 2v70_A 163 NPFNC 167 (220)
T ss_dssp CCEEC
T ss_pred cCCcC
Confidence 76654
No 102
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.81 E-value=5.9e-22 Score=208.77 Aligned_cols=235 Identities=21% Similarity=0.196 Sum_probs=179.1
Q ss_pred CCCEEECCCCcCCC----CCC---CCCCCCCEEEcCCCcCCCCCcc-----cccCCCCccEEEccCCcCCCC----CCcc
Q 048796 9 TLSVLNLSSNSLSG----TLP---TSLKSCVILDLSRNMISGDISD-----MQNWEANLEILDLSSNKLSGS----LPNL 72 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~----~~~---~~l~~L~~L~L~~N~l~~~~~~-----~~~~~~~L~~L~Ls~N~l~~~----~~~~ 72 (555)
+|++|+|++|+++. .++ ..+++|++|+|++|.+++.... .....++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 79999999999984 233 4567899999999999754322 233355799999999999864 3556
Q ss_pred ccCCCCccEEEeeCCcCCCCCchhcc-----CCCCccEEEcCCCcCCCC----CchhhhCCCCCCeEEccCCcccccCCc
Q 048796 73 TSQFDRLSTFNIRNNSVTGTLPSLLE-----ISPRLVTLDVSSNQLKGP----IPDNFFSSMALTNLNLSGNGFSGAIPL 143 (555)
Q Consensus 73 ~~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~----~~~~~~~~~~L~~L~Ls~N~l~~~~p~ 143 (555)
+..+++|++|+|++|.++...+..+. ..++|++|+|++|.++.. ++..+..+++|+.|+|++|.+++....
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 67789999999999999865444443 367999999999999864 477788899999999999998754221
Q ss_pred CccccccccccCCCCCcCEEEccCCcCCCc----CCccccCccccceeecccccccCCCchhccC-----CCCCCEEeCC
Q 048796 144 RSSHASELLVLPSYPPMESLDLSGNALTGV----LPSDIGNMGRLRLLNLANNHLSGKMPSELSK-----LGALEYLDLS 214 (555)
Q Consensus 144 ~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls 214 (555)
.+... ....+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+++
T Consensus 246 ~l~~~----~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 246 ELCPG----LLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHH----HTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHH----HhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 11110 011248999999999999964 5666778999999999999998654444432 3699999999
Q ss_pred CCcCCCCC----Chhhh--cCCCEEEeccCCCCCCcCcc
Q 048796 215 GNQFKGEI----PDKLS--LKLNEFNVSYNDLSGPIPEN 247 (555)
Q Consensus 215 ~N~l~~~~----p~~~~--~~L~~L~ls~N~l~~~~p~~ 247 (555)
+|.+++.. +..+. ++|+.|++++|.+++..+..
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 360 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRE 360 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHH
Confidence 99999653 33333 78999999999998765443
No 103
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=5.7e-19 Score=166.77 Aligned_cols=151 Identities=17% Similarity=0.199 Sum_probs=79.5
Q ss_pred EEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCc
Q 048796 33 ILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQ 112 (555)
Q Consensus 33 ~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 112 (555)
.+++++|.++.++.... ++|+.|+|++|.|++..+..|..+++|++|+|++|.|++..|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTEIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSSCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCcCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 34444444443332221 235555555555554444445555555555555555554445555555555555555555
Q ss_pred CCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccc
Q 048796 113 LKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192 (555)
Q Consensus 113 l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (555)
|+...+..|..+++|+.|+|++|.|++..+..+..+ ++|++|+|++|.|++..+..|..+++|+.|+|++|
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l---------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDL---------HNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCC---------CCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 553333334455555555555555555444444443 55666666666666555555666666666666666
Q ss_pred ccc
Q 048796 193 HLS 195 (555)
Q Consensus 193 ~l~ 195 (555)
.+.
T Consensus 163 ~~~ 165 (220)
T 2v9t_B 163 PFI 165 (220)
T ss_dssp CEE
T ss_pred CcC
Confidence 664
No 104
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.80 E-value=1e-19 Score=184.70 Aligned_cols=226 Identities=15% Similarity=0.093 Sum_probs=172.4
Q ss_pred CCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCC-CCcccccCCCCccE-EEccCCcCCCCCCccccCCCCccEE
Q 048796 8 TTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISG-DISDMQNWEANLEI-LDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~-L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
++|++|+|++|+|+.+.++ .+++|++|+|++|++.+ +..+.|..+++|++ +++.+|+|+...+..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5799999999999965444 46789999999999865 44678888877765 6777899998888999999999999
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCC-CcCCCCCchhhhCCC-CCCeEEccCCcccccCCcCccccccccccCCCCCc
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSS-NQLKGPIPDNFFSSM-ALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPM 160 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L 160 (555)
++++|+|+...+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+...+..+ .. .+|
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~---------~~L 179 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NG---------TQL 179 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TT---------EEE
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cc---------cch
Confidence 9999999977777777778899999965 667654455666654 68999999999985444333 33 578
Q ss_pred CEEEccC-CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccC
Q 048796 161 ESLDLSG-NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYN 238 (555)
Q Consensus 161 ~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N 238 (555)
+.|++++ |.++.+.+..|..+++|+.|||++|+|+...+.. +.+|+.|.+.++.--..+|..-. ++|+.++++++
T Consensus 180 ~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 180 DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLPTLEKLVALMEASLTYP 256 (350)
T ss_dssp EEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCCCTTTCCSCCEEECSCH
T ss_pred hHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCCCchhCcChhhCcCCCC
Confidence 9999975 6777666677999999999999999999654444 45666666655543335664222 78999999877
Q ss_pred CCCCCcCc
Q 048796 239 DLSGPIPE 246 (555)
Q Consensus 239 ~l~~~~p~ 246 (555)
..++....
T Consensus 257 ~~c~~~~~ 264 (350)
T 4ay9_X 257 SHCCAFAN 264 (350)
T ss_dssp HHHHHHHH
T ss_pred ccccchhh
Confidence 65544433
No 105
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.9e-19 Score=176.31 Aligned_cols=190 Identities=21% Similarity=0.282 Sum_probs=156.9
Q ss_pred CCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeC
Q 048796 8 TTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRN 86 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 86 (555)
.++..+++..+.+++..+ ..+++|+.|++++|.++... .+..+++|+.|+|++|.+++..+ +..+++|++|+|++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHHHTTCSCTTSEECHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHHHhcCCCcccccchhhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344556677777775433 45788999999999998763 26667889999999999986544 89999999999999
Q ss_pred CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 87 NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 87 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
|.+++. + .+..+++|++|+|++|++++. ..+..+++|+.|++++|.+++. ..+.. +++|+.|+|+
T Consensus 100 n~l~~~-~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~---------l~~L~~L~L~ 164 (291)
T 1h6t_A 100 NKVKDL-S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSR---------LTKLDTLSLE 164 (291)
T ss_dssp SCCCCG-G-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGG---------CTTCSEEECC
T ss_pred CcCCCC-h-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhcc---------CCCCCEEEcc
Confidence 999863 3 488999999999999999853 5688899999999999999864 23333 4899999999
Q ss_pred CCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCC
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKG 220 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 220 (555)
+|.+++..+ +..+++|+.|+|++|.|++ ++ .+..+++|+.|++++|+++.
T Consensus 165 ~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 165 DNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 999997655 8899999999999999996 44 48899999999999999985
No 106
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=2.7e-18 Score=163.26 Aligned_cols=153 Identities=18% Similarity=0.213 Sum_probs=92.1
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
+.++++++.++.++.... ++|++|+|++|.|++..+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCSSCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcCccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 345555555554443322 35666666666666555555666666666666666665544455566666666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeeccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLAN 191 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 191 (555)
+|++..+..|..+++|+.|+|++|.|+ .+|..+..+ ++|++|+|++|.|++..+..|..+++|+.|+|++
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l---------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERL---------THLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGC---------TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccC---------CCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 666544445556666666666666665 444444443 6666677777776666556667777777777777
Q ss_pred ccccCC
Q 048796 192 NHLSGK 197 (555)
Q Consensus 192 N~l~~~ 197 (555)
|.+...
T Consensus 169 N~~~c~ 174 (229)
T 3e6j_A 169 NPWDCE 174 (229)
T ss_dssp SCBCTT
T ss_pred CCccCC
Confidence 777643
No 107
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=7.8e-19 Score=189.91 Aligned_cols=175 Identities=18% Similarity=0.229 Sum_probs=150.6
Q ss_pred cCCCCCCEEECCCCcCCCCCC-CCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLP-TSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFN 83 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 83 (555)
.++++|+.|+|++|.|..... ..+++|+.|+|++|.|+++.+ +..+++|+.|+|++|.|++ ++ .+..+++|++|+
T Consensus 40 ~~L~~L~~L~l~~n~i~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCCTTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred hcCCCCCEEECcCCCCCCChHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 356789999999999985422 457899999999999998776 7788899999999999985 33 689999999999
Q ss_pred eeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEE
Q 048796 84 IRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESL 163 (555)
Q Consensus 84 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L 163 (555)
|++|.|.+. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.|.+..| +..+ ++|+.|
T Consensus 116 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l---------~~L~~L 180 (605)
T 1m9s_A 116 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGL---------TKLQNL 180 (605)
T ss_dssp CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTC---------TTCCEE
T ss_pred ecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccC---------CCCCEE
Confidence 999999964 4588999999999999999865 678999999999999999987655 4444 999999
Q ss_pred EccCCcCCCcCCccccCccccceeecccccccCCCch
Q 048796 164 DLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPS 200 (555)
Q Consensus 164 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 200 (555)
+|++|.|++. ..+..+++|+.|+|++|.+.+....
T Consensus 181 ~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 181 YLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp ECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred ECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccc
Confidence 9999999975 4689999999999999999865433
No 108
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=2.7e-18 Score=163.25 Aligned_cols=157 Identities=24% Similarity=0.241 Sum_probs=133.4
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
..+.++.+++.++ .+|..+. ++|++|+|++|.|++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 3678999999988 5565443 789999999999998888889999999999999999986666677889999999999
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
+|.|++..+..+..+ ++|++|+|++|.|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 97 ~N~l~~l~~~~~~~l---------~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 166 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRL---------VHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166 (229)
T ss_dssp SSCCCCCCTTTTTTC---------TTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcCCccChhHhCcc---------hhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 999987766656655 88999999999999 66788889999999999999999777778889999999999
Q ss_pred CCCcCCCCCC
Q 048796 214 SGNQFKGEIP 223 (555)
Q Consensus 214 s~N~l~~~~p 223 (555)
++|.+++..+
T Consensus 167 ~~N~~~c~c~ 176 (229)
T 3e6j_A 167 FGNPWDCECR 176 (229)
T ss_dssp TTSCBCTTBG
T ss_pred eCCCccCCcc
Confidence 9999987654
No 109
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2.9e-18 Score=159.00 Aligned_cols=152 Identities=18% Similarity=0.214 Sum_probs=97.5
Q ss_pred CCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 52 EANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
+++|+.|++++|.++ .++ .+..+++|++|++++|.++.. ..+..+++|++|++++|++++..+..+..+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 345677777777666 344 466666777777777755422 3566667777777777777655566666677777777
Q ss_pred ccCCcccccCCcCccccccccccCCCCCcCEEEccCCc-CCCcCCccccCccccceeecccccccCCCchhccCCCCCCE
Q 048796 132 LSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNA-LTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEY 210 (555)
Q Consensus 132 Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 210 (555)
|++|.+++..+..+..+ ++|++|+|++|. ++. ++ .+..+++|+.|++++|.+++. + .+..+++|+.
T Consensus 119 Ls~n~i~~~~~~~l~~l---------~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~ 185 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTL---------PKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQ 185 (197)
T ss_dssp CCSSBCBGGGHHHHTTC---------SSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCE
T ss_pred ecCCccCcHhHHHHhhC---------CCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCE
Confidence 77777765544444443 677777777776 543 33 577777788888888877753 3 6677778888
Q ss_pred EeCCCCcCCC
Q 048796 211 LDLSGNQFKG 220 (555)
Q Consensus 211 L~Ls~N~l~~ 220 (555)
|++++|+|.+
T Consensus 186 L~l~~N~i~~ 195 (197)
T 4ezg_A 186 LYAFSQTIGG 195 (197)
T ss_dssp EEECBC----
T ss_pred EEeeCcccCC
Confidence 8888887753
No 110
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.3e-18 Score=169.10 Aligned_cols=169 Identities=21% Similarity=0.354 Sum_probs=110.7
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEc
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDV 108 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 108 (555)
.++..+++++|.+++.. .+..+++|+.|++++|.++. ++ .+..+++|++|+|++|.|++..+ +..+++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 34455566666665443 23445567777777777663 33 46667777777777777765443 667777777777
Q ss_pred CCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceee
Q 048796 109 SSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLN 188 (555)
Q Consensus 109 ~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 188 (555)
++|++++ ++. +.. .+|+.|+|++|.+++. + .+. .+++|+.|+|++|.|++. ..+..+++|+.|+
T Consensus 93 ~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~---------~l~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~ 156 (263)
T 1xeu_A 93 NRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLI---------HLKNLEILSIRNNKLKSI--VMLGFLSKLEVLD 156 (263)
T ss_dssp CSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGT---------TCTTCCEEECTTSCCCBC--GGGGGCTTCCEEE
T ss_pred CCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhc---------CcccccEEECCCCcCCCC--hHHccCCCCCEEE
Confidence 7777764 332 222 6777777777777642 1 222 337777777877777754 2577778888888
Q ss_pred cccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 189 LANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 189 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
|++|.|++. ..+..+++|+.|++++|.+++.
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 888888765 5677788888888888887754
No 111
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=4.5e-18 Score=157.00 Aligned_cols=141 Identities=23% Similarity=0.258 Sum_probs=88.9
Q ss_pred CccEEEcCCCcCCCCCch-hhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccC
Q 048796 102 RLVTLDVSSNQLKGPIPD-NFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGN 180 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~ 180 (555)
+|++|+|++|+|++..+. .|..+++|+.|+|++|.|++..|..+..+ ++|++|+|++|.|++..+..|..
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---------~~L~~L~Ls~N~l~~~~~~~~~~ 100 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGA---------SHIQELQLGENKIKEISNKMFLG 100 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTC---------TTCCEEECCSCCCCEECSSSSTT
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCc---------ccCCEEECCCCcCCccCHHHhcC
Confidence 455555555555433332 24555555555555555555555544444 66666666666666666667777
Q ss_pred ccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCCCCCCcCccccCC
Q 048796 181 MGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYNDLSGPIPENLRNF 251 (555)
Q Consensus 181 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~l~~~~p~~l~~~ 251 (555)
+++|+.|+|++|+|++..|..+..+++|++|+|++|.+++..+..+. ..++...+..+...|..|..+.+.
T Consensus 101 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l~~~ 172 (192)
T 1w8a_A 101 LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDV 172 (192)
T ss_dssp CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTTTTS
T ss_pred CCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHHcCC
Confidence 78888888888888877788888888888888888888876664332 223333445566666667665544
No 112
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=6e-18 Score=156.85 Aligned_cols=154 Identities=18% Similarity=0.203 Sum_probs=110.3
Q ss_pred cCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccc
Q 048796 74 SQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLV 153 (555)
Q Consensus 74 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~ 153 (555)
..+++|++|++++|.++ .++ .+..+++|++|++++|.++ .+..+..+++|+.|++++|.+++..+..+..+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l----- 111 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGL----- 111 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTC-----
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCC-----
Confidence 56677888888888887 444 5777788888888888665 23467778888888888888876666666555
Q ss_pred cCCCCCcCEEEccCCcCCCcCCccccCccccceeeccccc-ccCCCchhccCCCCCCEEeCCCCcCCCCCChhhhcCCCE
Q 048796 154 LPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLSLKLNE 232 (555)
Q Consensus 154 l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~L~~ 232 (555)
++|++|+|++|.+++..+..+..+++|+.|+|++|. ++ .++ .+..+++|+.|++++|.+++..+-.-.++|+.
T Consensus 112 ----~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~ 185 (197)
T 4ezg_A 112 ----TSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQ 185 (197)
T ss_dssp ----TTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCE
T ss_pred ----CCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCE
Confidence 778888888888887677778888888888888887 55 344 57778888888888888875432211267888
Q ss_pred EEeccCCCCC
Q 048796 233 FNVSYNDLSG 242 (555)
Q Consensus 233 L~ls~N~l~~ 242 (555)
|++++|++.+
T Consensus 186 L~l~~N~i~~ 195 (197)
T 4ezg_A 186 LYAFSQTIGG 195 (197)
T ss_dssp EEECBC----
T ss_pred EEeeCcccCC
Confidence 8888887753
No 113
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.1e-18 Score=169.51 Aligned_cols=166 Identities=23% Similarity=0.311 Sum_probs=114.6
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
++..+++++|.+++.. .+..+++|++|++++|.|+. ++ .+..+++|+.|+|++|++++..+ +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 4666777777776433 46677778888888887774 33 56777778888888887774333 7777778888888
Q ss_pred CCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeC
Q 048796 134 GNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDL 213 (555)
Q Consensus 134 ~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 213 (555)
+|.+++..+ +.. ++|+.|+|++|.+++. ..+..+++|+.|+|++|+|++. + .+..+++|+.|++
T Consensus 94 ~N~l~~l~~-----------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L 157 (263)
T 1xeu_A 94 RNRLKNLNG-----------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDL 157 (263)
T ss_dssp SSCCSCCTT-----------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEEC
T ss_pred CCccCCcCc-----------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEEC
Confidence 887764221 111 5677788888877754 3577777788888888877754 3 5677777888888
Q ss_pred CCCcCCCCCChhhh--cCCCEEEeccCCCCCC
Q 048796 214 SGNQFKGEIPDKLS--LKLNEFNVSYNDLSGP 243 (555)
Q Consensus 214 s~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~ 243 (555)
++|++++. ..+. ++|+.|++++|++++.
T Consensus 158 ~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 158 HGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 88877765 2222 6777788888877654
No 114
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=8.8e-19 Score=194.10 Aligned_cols=213 Identities=19% Similarity=0.220 Sum_probs=112.2
Q ss_pred CCCCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCC---------CCcccccCCCCccEEEccCCcCCCCCCccccCCCC
Q 048796 8 TTLSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISG---------DISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDR 78 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~---------~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~ 78 (555)
+.++.|+|.+|.+... +.. .|+.++|+.|.|.+ ..+..+..+.+|+.|+|++|.+. .+|..+..+++
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~--~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~ 248 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA--LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDF 248 (727)
T ss_dssp ----------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCS
T ss_pred CccceEEeeCCCCCcc-hhh--HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCC
Confidence 4577888888888753 221 23334444444332 33566777778888888888887 66666678888
Q ss_pred ccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCC
Q 048796 79 LSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYP 158 (555)
Q Consensus 79 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~ 158 (555)
|++|+|++|.|+ .+|..|..+++|+.|+|++|+|+ .+|..|+.+.+|+.|+|++|.|+ .+|..++.+ +
T Consensus 249 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l---------~ 316 (727)
T 4b8c_D 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNL---------C 316 (727)
T ss_dssp CSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSC---------T
T ss_pred CCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcC---------C
Confidence 888888888888 77788888888888888888888 67888888888888888888886 566666666 7
Q ss_pred CcCEEEccCCcCCCcCCccccCccc-cceeecccccccCCCchhccCCCCCCEEeCCCC--------cCCCCCChhhh--
Q 048796 159 PMESLDLSGNALTGVLPSDIGNMGR-LRLLNLANNHLSGKMPSELSKLGALEYLDLSGN--------QFKGEIPDKLS-- 227 (555)
Q Consensus 159 ~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~-- 227 (555)
+|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|+.|++++| .|.+..+..+.
T Consensus 317 ~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l 390 (727)
T 4b8c_D 317 NLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDL 390 (727)
T ss_dssp TCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C------------------------------
T ss_pred CccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcc
Confidence 8888888888888887777765432 23478888888877765 3555666666 22222222222
Q ss_pred cCCCEEEeccCCCCC
Q 048796 228 LKLNEFNVSYNDLSG 242 (555)
Q Consensus 228 ~~L~~L~ls~N~l~~ 242 (555)
..+....+++|-+.+
T Consensus 391 ~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 391 AKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -----------CCCG
T ss_pred cccceeeeecccccc
Confidence 334556677777654
No 115
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=3.3e-18 Score=189.47 Aligned_cols=187 Identities=17% Similarity=0.184 Sum_probs=73.4
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCC---------CCCccccCCCCccEEEeeCCcCCCCCchhccC
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSG---------SLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEI 99 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 99 (555)
+.++.|+|.+|.+....... |+.++|+.|.|.+ ..+..+..+..|+.|+|++|.|. .+|..+..
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~------l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQAL------LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCcchhhH------hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 34677888888776543222 3444444444331 33445555555666666666555 34444445
Q ss_pred CCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCcccc
Q 048796 100 SPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIG 179 (555)
Q Consensus 100 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~ 179 (555)
+++|++|+|++|.|+ .+|..|..+++|+.|+|++|.|+ .+|..++.+ ++|++|+|++|.|+ .+|..|.
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l---------~~L~~L~L~~N~l~-~lp~~~~ 313 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC---------FQLKYFYFFDNMVT-TLPWEFG 313 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG---------TTCSEEECCSSCCC-CCCSSTT
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC---------CCCCEEECCCCCCC-ccChhhh
Confidence 555666666666555 45555555555555555555555 445544444 55555555555555 3444455
Q ss_pred CccccceeecccccccCCCchhccCCCC-CCEEeCCCCcCCCCCChhhhcCCCEEEeccC
Q 048796 180 NMGRLRLLNLANNHLSGKMPSELSKLGA-LEYLDLSGNQFKGEIPDKLSLKLNEFNVSYN 238 (555)
Q Consensus 180 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~~L~~L~ls~N 238 (555)
.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|..|+++.|
T Consensus 314 ~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----~l~~l~l~~n 369 (727)
T 4b8c_D 314 NLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----ERRFIEINTD 369 (727)
T ss_dssp SCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----C---------
T ss_pred cCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc----ccceeEeecc
Confidence 5555555555555555555554433211 12345555555555553 2334444444
No 116
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=2.4e-20 Score=200.59 Aligned_cols=193 Identities=19% Similarity=0.136 Sum_probs=119.0
Q ss_pred CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCc-------------CCCCCCccccCCCCccEEE-eeCCcCCCCC
Q 048796 28 LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNK-------------LSGSLPNLTSQFDRLSTFN-IRNNSVTGTL 93 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~~~ 93 (555)
.++|+.|+|++|+|+.+ |..+..+++|+.|++++|. +.+.+|..+..+++|+.|+ ++.|.+....
T Consensus 348 ~~~L~~L~Ls~n~L~~L-p~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~ 426 (567)
T 1dce_A 348 DEQLFRCELSVEKSTVL-QSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLR 426 (567)
T ss_dssp TTTSSSCCCCHHHHHHH-HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred CccceeccCChhhHHhh-HHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhh
Confidence 34555666666666533 3333444456666665553 3445555666666666666 4444332110
Q ss_pred ch-----hccC--CCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc
Q 048796 94 PS-----LLEI--SPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS 166 (555)
Q Consensus 94 ~~-----~l~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls 166 (555)
.- .+.. ...|+.|+|++|+|++ +|. +..+++|+.|+|++|.|+ .+|..++.+ ++|+.|+|+
T Consensus 427 ~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l---------~~L~~L~Ls 494 (567)
T 1dce_A 427 SKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL---------RCLEVLQAS 494 (567)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC---------TTCCEEECC
T ss_pred hhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC---------CCCCEEECC
Confidence 00 0000 1247777777777774 555 777777777777777777 566666555 777777777
Q ss_pred CCcCCCcCCccccCccccceeecccccccCCC-chhccCCCCCCEEeCCCCcCCCCCChhh-----hcCCCEEEe
Q 048796 167 GNALTGVLPSDIGNMGRLRLLNLANNHLSGKM-PSELSKLGALEYLDLSGNQFKGEIPDKL-----SLKLNEFNV 235 (555)
Q Consensus 167 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~~L~~L~l 235 (555)
+|.|++ +| .|..+++|+.|+|++|.|++.. |..+..+++|+.|+|++|.|++..|... .++|+.||+
T Consensus 495 ~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 495 DNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 777775 45 6777777888888888777665 7777777778888888887776555321 156776653
No 117
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.1e-16 Score=147.60 Aligned_cols=127 Identities=24% Similarity=0.319 Sum_probs=68.5
Q ss_pred CEEECCCCcCCCCCCCCC-CCCCEEEcCCCcCCCCCcc-cccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 11 SVLNLSSNSLSGTLPTSL-KSCVILDLSRNMISGDISD-MQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~l-~~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
++|++++|+|+ .+|..+ .+|++|+|++|+|+++.+. .+..+++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred CEEEcCCCCcC-cCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 55666666664 344332 3555666666655554432 34555555555555555555555555555555555555555
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
|++..+..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|.+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 55555555555555555555555555444555555555555555555444
No 118
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=2.7e-16 Score=141.71 Aligned_cols=132 Identities=26% Similarity=0.250 Sum_probs=78.6
Q ss_pred CCccEEEccCCcCC-CCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 53 ANLEILDLSSNKLS-GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 53 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
++|+.|+|++|.++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45777777777776 55666667777777777777777654 5566677777777777777655666665666666666
Q ss_pred ccCCcccccCC-cCccccccccccCCCCCcCEEEccCCcCCCcCC---ccccCccccceeeccccccc
Q 048796 132 LSGNGFSGAIP-LRSSHASELLVLPSYPPMESLDLSGNALTGVLP---SDIGNMGRLRLLNLANNHLS 195 (555)
Q Consensus 132 Ls~N~l~~~~p-~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 195 (555)
|++|.+++... ..+.. +++|++|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~---------l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKK---------LECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSS---------CSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhc---------CCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666653211 22222 2455555555555554333 24445555555555555544
No 119
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=9.4e-16 Score=139.38 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=81.0
Q ss_pred CCEEECCCCcCCCCCCCCCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 10 LSVLNLSSNSLSGTLPTSLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
.+.+++++|+++.......++|++|+|++|++++..+..+..+++|++|+|++|.|++..+..|..+++|++|+|++|+|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 88 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL 88 (177)
T ss_dssp TTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCc
Confidence 46677777777643333345666777777776666655566666666777766666655555566666666666666666
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG 139 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 139 (555)
++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 65555556666666666666666664444444556666666666666554
No 120
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.66 E-value=1.1e-16 Score=159.79 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=79.0
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
++.+|+.. .+.||+|+||.||+|++. +++.||||+++.......++|.+|+.+|++++|||||+++|+|.+.
T Consensus 38 i~~~d~~l--~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~ 115 (329)
T 4aoj_A 38 IKRRDIVL--KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG 115 (329)
T ss_dssp CCGGGEEE--EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred cCHHHeEE--EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 44455544 678999999999999863 4788999999877666678999999999999999999999999987
Q ss_pred CCceEEEEEeccCCCChhhhh
Q 048796 534 REQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l 554 (555)
+. .+||||||++|+|.++|
T Consensus 116 ~~--~~lV~Ey~~~G~L~~~l 134 (329)
T 4aoj_A 116 RP--LLMVFEYMRHGDLNRFL 134 (329)
T ss_dssp SS--EEEEEECCTTCBHHHHH
T ss_pred CE--EEEEEEcCCCCcHHHHH
Confidence 77 99999999999999886
No 121
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.66 E-value=1.1e-16 Score=157.81 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=76.9
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
+..+++.. .+.||+|+||.||+|++. ++..||||+++.......++|.+|+.+|++++|||||+++|+|.+.
T Consensus 10 I~r~~~~l--~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~ 87 (299)
T 4asz_A 10 IKRHNIVL--KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 87 (299)
T ss_dssp CCGGGEEE--EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred cCHHHeEE--eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence 34444443 678999999999999863 4778999999877666678899999999999999999999999987
Q ss_pred CCceEEEEEeccCCCChhhhhC
Q 048796 534 REQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 534 ~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
+. .++|||||++|+|.++|+
T Consensus 88 ~~--~~lV~Ey~~~G~L~~~l~ 107 (299)
T 4asz_A 88 DP--LIMVFEYMKHGDLNKFLR 107 (299)
T ss_dssp SS--EEEEEECCTTCBHHHHHH
T ss_pred CE--EEEEEEcCCCCcHHHHHH
Confidence 77 999999999999999873
No 122
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2e-16 Score=142.52 Aligned_cols=133 Identities=23% Similarity=0.254 Sum_probs=91.7
Q ss_pred CCCccEEEeeCCcCC-CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccccc
Q 048796 76 FDRLSTFNIRNNSVT-GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL 154 (555)
Q Consensus 76 l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l 154 (555)
.++|++|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------ 94 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKL------ 94 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHC------
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhC------
Confidence 366778888888876 56666677777788888888877744 566677777777777777776555444434
Q ss_pred CCCCCcCEEEccCCcCCCcCC-ccccCccccceeecccccccCCCc---hhccCCCCCCEEeCCCCcCC
Q 048796 155 PSYPPMESLDLSGNALTGVLP-SDIGNMGRLRLLNLANNHLSGKMP---SELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 155 ~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 219 (555)
++|++|+|++|.+++... ..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 95 ---~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 95 ---PNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ---TTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ---CCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 677777777777775422 566677777777777777775444 36667777777777777666
No 123
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=1.5e-15 Score=140.03 Aligned_cols=126 Identities=21% Similarity=0.214 Sum_probs=67.8
Q ss_pred CEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcC
Q 048796 11 SVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSV 89 (555)
Q Consensus 11 ~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 89 (555)
+.+++++|+|+ .+|.. .++|++|+|++|+|+.++ ..+..+++|+.|+|++|.|++..+..|.++++|++|+|++|+|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~~~l~~L~L~~n~i~~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIPRDVTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp TEEECTTSCCS-SCCSCCCTTCCEEECCSSCCCSCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEcCCCCCC-cCCCCCCCCCCEEECCCCcCchhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 45666666665 33332 335556666666555333 4444555555555555555555555555555555555555555
Q ss_pred CCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 90 TGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 90 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
++..+..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 5555555555555555555555555333334445555555555555544
No 124
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.65 E-value=9e-19 Score=188.28 Aligned_cols=180 Identities=19% Similarity=0.192 Sum_probs=150.2
Q ss_pred cCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc-------------CCCCCchhccCCCCccEEE-cCCCcCCC
Q 048796 50 NWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS-------------VTGTLPSLLEISPRLVTLD-VSSNQLKG 115 (555)
Q Consensus 50 ~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~l~~l~~L~~L~-L~~N~l~~ 115 (555)
...++|+.|+|++|.|+ .+|..++.+++|++|++++|. +.+..|..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45678999999999998 789999999999999997765 5567778888889999998 6666543
Q ss_pred CCch------hhhC--CCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCcccccee
Q 048796 116 PIPD------NFFS--SMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLL 187 (555)
Q Consensus 116 ~~~~------~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 187 (555)
.++. .+.. ...|+.|+|++|.|++ +|. +..+ ++|+.|+|++|.|+ .+|..|+.+++|+.|
T Consensus 424 ~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l---------~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 491 (567)
T 1dce_A 424 DLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQL---------LLVTHLDLSHNRLR-ALPPALAALRCLEVL 491 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGG---------TTCCEEECCSSCCC-CCCGGGGGCTTCCEE
T ss_pred hhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-cccc---------ccCcEeecCccccc-ccchhhhcCCCCCEE
Confidence 1111 1111 2369999999999986 554 6665 89999999999999 778899999999999
Q ss_pred ecccccccCCCchhccCCCCCCEEeCCCCcCCCCC-Chhhh--cCCCEEEeccCCCCCCcC
Q 048796 188 NLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEI-PDKLS--LKLNEFNVSYNDLSGPIP 245 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~--~~L~~L~ls~N~l~~~~p 245 (555)
+|++|.|++ +| .++.+++|+.|+|++|+|++.. |..+. ++|+.|++++|++++..|
T Consensus 492 ~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 492 QASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp ECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 999999996 67 8999999999999999999886 88777 899999999999998765
No 125
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=3.9e-16 Score=144.00 Aligned_cols=110 Identities=26% Similarity=0.306 Sum_probs=68.7
Q ss_pred CccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCc
Q 048796 102 RLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNM 181 (555)
Q Consensus 102 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l 181 (555)
+|+.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|..+ ++|++|+|++|.|++..+..|..+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l---------~~L~~L~Ls~N~l~~i~~~~f~~l 101 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNM---------TQLLTLILSYNRLRCIPPRTFDGL 101 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTC---------TTCCEEECCSSCCCBCCTTTTTTC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCC---------CCCCEEECCCCccCEeCHHHhCCC
Confidence 4555555555554 444555555555555555555554444444444 566666666666666666667777
Q ss_pred cccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCC
Q 048796 182 GRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGE 221 (555)
Q Consensus 182 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 221 (555)
++|+.|+|++|.|+...+..|..+++|+.|+|++|.+...
T Consensus 102 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 102 KSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp TTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 7777777777777765555677777777777777777643
No 126
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=3.5e-16 Score=157.07 Aligned_cols=199 Identities=18% Similarity=0.145 Sum_probs=119.4
Q ss_pred CCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcC----CCCCchhhhCCCCC
Q 048796 52 EANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQL----KGPIPDNFFSSMAL 127 (555)
Q Consensus 52 ~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l----~~~~~~~~~~~~~L 127 (555)
+.+|+.|+|.+ .++.+.+.+|.++++|++|+|++|.+..+.+.+|..+.++..+.+..+.. .......|..+..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66677777766 66655556666677777777777766655556666666666555544211 11122233333333
Q ss_pred C-eEEccCCcc-cc------cCCcCccccc--------ccccc-CCCCCcCEEEccCCcCCCcCCccccCccccceeecc
Q 048796 128 T-NLNLSGNGF-SG------AIPLRSSHAS--------ELLVL-PSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLA 190 (555)
Q Consensus 128 ~-~L~Ls~N~l-~~------~~p~~~~~~~--------~l~~l-~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 190 (555)
+ .+.+....- .. ..+..+..+. ....+ ..+++|+.|+|++|.++.+.+.+|.+|.+|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 3 222211100 00 0000000000 00000 014788899999888887777788888889999998
Q ss_pred cccccCCCchhccCCCCCC-EEeCCCCcCCCCCChhhh--cCCCEEEeccCCCCCCcCccccCCCC
Q 048796 191 NNHLSGKMPSELSKLGALE-YLDLSGNQFKGEIPDKLS--LKLNEFNVSYNDLSGPIPENLRNFPK 253 (555)
Q Consensus 191 ~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~l~~~~p~~l~~~~~ 253 (555)
+| ++.....+|.++++|+ .|++.+ .++...+..|. .+|+.+++++|.+....+..|.++++
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~ 322 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVP 322 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcc
Confidence 87 7767777888888898 888888 67755556665 67888888888888666666655543
No 127
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.64 E-value=2.3e-16 Score=156.03 Aligned_cols=91 Identities=22% Similarity=0.307 Sum_probs=75.0
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
+..+++.. .+.||+|+||.||+|++ .+++.||||+++.... ...++|.+|+.+|++++|||||+++|+|.+
T Consensus 23 i~~~~~~~--~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 23 ISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp CCGGGEEE--EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCHHHCeE--eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 34444444 56899999999999997 2467899999965433 346889999999999999999999999998
Q ss_pred CCCceEEEEEeccCCCChhhhh
Q 048796 533 PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. .++|||||++|+|.++|
T Consensus 101 ~~~--~~lV~Ey~~~G~L~~~L 120 (308)
T 4gt4_A 101 DQP--LSMIFSYCSHGDLHEFL 120 (308)
T ss_dssp SSS--CEEEEECCSSCBHHHHH
T ss_pred CCE--EEEEEEcCCCCcHHHHH
Confidence 777 99999999999999987
No 128
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=4.7e-16 Score=137.06 Aligned_cols=85 Identities=28% Similarity=0.373 Sum_probs=56.4
Q ss_pred CCccEEEccCCcCC-CCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEE
Q 048796 53 ANLEILDLSSNKLS-GSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLN 131 (555)
Q Consensus 53 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~ 131 (555)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 35677777777766 56666666777777777777777654 5566677777777777777655666555566666666
Q ss_pred ccCCcccc
Q 048796 132 LSGNGFSG 139 (555)
Q Consensus 132 Ls~N~l~~ 139 (555)
+++|.+++
T Consensus 95 ls~N~i~~ 102 (149)
T 2je0_A 95 LSGNKIKD 102 (149)
T ss_dssp CTTSCCCS
T ss_pred CCCCcCCC
Confidence 66666553
No 129
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=3.8e-16 Score=137.66 Aligned_cols=128 Identities=23% Similarity=0.295 Sum_probs=91.7
Q ss_pred CCCccEEEeeCCcCC-CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCcccccccccc
Q 048796 76 FDRLSTFNIRNNSVT-GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVL 154 (555)
Q Consensus 76 l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l 154 (555)
.++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l------ 87 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKC------ 87 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHC------
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhC------
Confidence 367888888888887 66777777888888888888888754 667777778888888887776555544444
Q ss_pred CCCCCcCEEEccCCcCCCc-CCccccCccccceeecccccccCCCc---hhccCCCCCCEEeCC
Q 048796 155 PSYPPMESLDLSGNALTGV-LPSDIGNMGRLRLLNLANNHLSGKMP---SELSKLGALEYLDLS 214 (555)
Q Consensus 155 ~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls 214 (555)
++|++|++++|.+++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.||++
T Consensus 88 ---~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 88 ---PNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ---TTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ---CCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6777777777777753 23567777777777777777776544 456677777777765
No 130
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=5.5e-15 Score=134.27 Aligned_cols=129 Identities=15% Similarity=0.166 Sum_probs=72.6
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
+.+++++|+++.++.... ++|+.|+|++|.+++..+..|..+++|++|+|++|.|++..+..+..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 456666666665543332 35666666666666555555666666666666666666555555566666666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCC
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~ 172 (555)
++++..+..+..+++|+.|+|++|.+++..+..+..+ ++|++|+|++|.+++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---------~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRL---------TSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC---------TTCCEEECCSSCBCC
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCC---------cccCEEEecCCCeec
Confidence 6664444445555555555555555553333222222 444555555554443
No 131
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.59 E-value=4.9e-17 Score=176.65 Aligned_cols=209 Identities=17% Similarity=0.099 Sum_probs=112.6
Q ss_pred CCCCEEEcCCCcCCCCCc-ccccCCCCccEEEccCCcCC-CCCCccccCCCCccEEEeeC-----------CcCCCC-Cc
Q 048796 29 KSCVILDLSRNMISGDIS-DMQNWEANLEILDLSSNKLS-GSLPNLTSQFDRLSTFNIRN-----------NSVTGT-LP 94 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~-----------N~l~~~-~~ 94 (555)
++|++|+|++|.+++... ..+..+++|++|+|+ +.+. +.++..+..+++|++|+|++ |.+++. +.
T Consensus 293 ~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 293 AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 455556665555443221 223445556666655 3222 12222334455666666662 344422 11
Q ss_pred hhccCCCCccEEEcCCCcCCCCCchhhhC-CCCCCeEEcc----CCcccccCCc-CccccccccccCCCCCcCEEEccCC
Q 048796 95 SLLEISPRLVTLDVSSNQLKGPIPDNFFS-SMALTNLNLS----GNGFSGAIPL-RSSHASELLVLPSYPPMESLDLSGN 168 (555)
Q Consensus 95 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-~~~L~~L~Ls----~N~l~~~~p~-~~~~~~~l~~l~~~~~L~~L~Ls~N 168 (555)
.....+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++...+ .+.. .+..+++|++|+|++|
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~-----~~~~~~~L~~L~L~~~ 446 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS-----LLIGCKKLRRFAFYLR 446 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH-----HHHHCTTCCEEEEECC
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH-----HHHhCCCCCEEEEecC
Confidence 22334566666666666665544444444 6666666664 4444432100 0000 0122477778887643
Q ss_pred c--CCCcCCcccc-CccccceeecccccccC-CCchhccCCCCCCEEeCCCCcCCCCCChhhh---cCCCEEEeccCCCC
Q 048796 169 A--LTGVLPSDIG-NMGRLRLLNLANNHLSG-KMPSELSKLGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSYNDLS 241 (555)
Q Consensus 169 ~--l~~~~p~~~~-~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~N~l~ 241 (555)
. +++..+..+. .+++|+.|+|++|.+++ .++..+.++++|+.|+|++|.|++.....+. ++|+.|++++|+++
T Consensus 447 ~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 447 QGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp GGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 3 5554444443 36778888888888775 3344556778888888888887644333322 67888888888876
Q ss_pred CC
Q 048796 242 GP 243 (555)
Q Consensus 242 ~~ 243 (555)
..
T Consensus 527 ~~ 528 (592)
T 3ogk_B 527 MT 528 (592)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 132
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.56 E-value=2.1e-16 Score=171.65 Aligned_cols=131 Identities=14% Similarity=0.064 Sum_probs=60.6
Q ss_pred CCCCCCEEECCCCcCCCC-------CCCCCCCCCEEEcCCCcCCCCC----cccccCCCCccEEEccCCcCCCCCCcccc
Q 048796 6 NSTTLSVLNLSSNSLSGT-------LPTSLKSCVILDLSRNMISGDI----SDMQNWEANLEILDLSSNKLSGSLPNLTS 74 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~~-------~~~~l~~L~~L~L~~N~l~~~~----~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~ 74 (555)
+|++|++|+|++|.+++. .+..+++|++|+|++|.+++.. +..+..+++|+.|+|++|.+.+ ++..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 345556666665555433 1223455556666555554221 2233344556666666655553 334445
Q ss_pred CCCCccEEEeeCCcCC---CCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 75 QFDRLSTFNIRNNSVT---GTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 75 ~l~~L~~L~L~~N~l~---~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
.+++|++|+++.+... ......+..+++|+.|+++++.. ..+|..+..+++|+.|+|++|.++
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~ 306 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLE 306 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCC
T ss_pred hhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCC
Confidence 5555555555432211 11222333444444444444322 234444444555555555555543
No 133
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.55 E-value=4.7e-15 Score=148.42 Aligned_cols=83 Identities=23% Similarity=0.417 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.++.. .....+.|.+|+.+|++++|||||++++++.+.+. .|+|||||+
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~--~yiVmEy~~ 106 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGS--LYIVMDYCE 106 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCT
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCE--EEEEEeCCC
Confidence 67899999999999997 67999999999653 23346789999999999999999999999998777 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.++|
T Consensus 107 gg~L~~~i 114 (350)
T 4b9d_A 107 GGDLFKRI 114 (350)
T ss_dssp TCBHHHHH
T ss_pred CCcHHHHH
Confidence 99999886
No 134
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.54 E-value=4.2e-15 Score=148.53 Aligned_cols=83 Identities=22% Similarity=0.344 Sum_probs=74.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|+.+|+.++|||||++++++.+.+. +|||||||++|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~--~~ivmEy~~gg 156 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGG 156 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEECCCTTE
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEeCCCCC
Confidence 46799999999999997 6799999999976555556778999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 157 ~L~~~l 162 (346)
T 4fih_A 157 ALTDIV 162 (346)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 999876
No 135
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=1.3e-14 Score=131.68 Aligned_cols=129 Identities=22% Similarity=0.195 Sum_probs=72.4
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEc
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDV 108 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 108 (555)
.+|++|+|++|+|+.+ +......++|+.|+|++|.|++. ..+..+++|++|+|++|.|++..+..+..+++|+.|+|
T Consensus 19 ~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 3455555555555533 33333333566666666666543 45566666666666666666444444566666666666
Q ss_pred CCCcCCCCCch--hhhCCCCCCeEEccCCcccccCCcC----ccccccccccCCCCCcCEEEccCCcCC
Q 048796 109 SSNQLKGPIPD--NFFSSMALTNLNLSGNGFSGAIPLR----SSHASELLVLPSYPPMESLDLSGNALT 171 (555)
Q Consensus 109 ~~N~l~~~~~~--~~~~~~~L~~L~Ls~N~l~~~~p~~----~~~~~~l~~l~~~~~L~~L~Ls~N~l~ 171 (555)
++|+|+ .+|. .+..+++|+.|++++|.+.. +|.. +..+ ++|+.|++++|.+.
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l---------~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKV---------PQVRVLDFQKVKLK 153 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHC---------TTCSEETTEECCHH
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHC---------CccceeCCCcCCHH
Confidence 666664 3444 55666666666666666652 2321 2222 66666666666654
No 136
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=1.8e-14 Score=144.60 Aligned_cols=235 Identities=13% Similarity=0.080 Sum_probs=144.0
Q ss_pred CCCCEEECCCCcCCC----CCCCCCCCCCEEEcCCCcCC--CCCcccccCCCCccEEEccCCcCCCCCCccccC------
Q 048796 8 TTLSVLNLSSNSLSG----TLPTSLKSCVILDLSRNMIS--GDISDMQNWEANLEILDLSSNKLSGSLPNLTSQ------ 75 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~----~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~------ 75 (555)
.+|+.|.++++ +.. .+...+++|+.|||++|+|. ......+ +.+..+.+..|.| ...+|.+
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVT 97 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccc
Confidence 35666666654 111 11122566777777777776 2222222 1244555555533 3456667
Q ss_pred --CCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcc----cccCCcCccccc
Q 048796 76 --FDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGF----SGAIPLRSSHAS 149 (555)
Q Consensus 76 --l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l----~~~~p~~~~~~~ 149 (555)
+++|++|+|.+ .++.+...+|.++++|+.|++.+|.+....+..|..+.++..+.+..+.. .......|..+.
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 88899999988 88767777888889999999988888766667777777776666655322 111122222221
Q ss_pred ccc---cc--------------CCCCCcCEEEccCCcCCCcCCccc-cCccccceeecccccccCCCchhccCCCCCCEE
Q 048796 150 ELL---VL--------------PSYPPMESLDLSGNALTGVLPSDI-GNMGRLRLLNLANNHLSGKMPSELSKLGALEYL 211 (555)
Q Consensus 150 ~l~---~l--------------~~~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (555)
.+. .+ -...+++.+.+.++-.. .....+ ..+++|+.|+|++|+++.....+|.++.+|+.|
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 111 00 01123344444433211 111111 137899999999999998888899999999999
Q ss_pred eCCCCcCCCCCChhhh--cCCC-EEEeccCCCCCCcCccccCCCC
Q 048796 212 DLSGNQFKGEIPDKLS--LKLN-EFNVSYNDLSGPIPENLRNFPK 253 (555)
Q Consensus 212 ~Ls~N~l~~~~p~~~~--~~L~-~L~ls~N~l~~~~p~~l~~~~~ 253 (555)
++.+| ++...+..|. .+|+ .+++.+ .++...+..|.++..
T Consensus 256 ~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~ 298 (329)
T 3sb4_A 256 KLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDN 298 (329)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTT
T ss_pred ECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCcc
Confidence 99998 7755555565 6799 999988 676555566666554
No 137
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.5e-14 Score=131.25 Aligned_cols=132 Identities=20% Similarity=0.187 Sum_probs=91.8
Q ss_pred cCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCe
Q 048796 50 NWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTN 129 (555)
Q Consensus 50 ~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 129 (555)
....+|+.|+|++|.++. ++......++|++|+|++|.|++. ..+..+++|+.|+|++|+|++..+..+..+++|+.
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 345568888888888873 454333344788888888888754 56777888888888888887544444577888888
Q ss_pred EEccCCcccccCCc--CccccccccccCCCCCcCEEEccCCcCCCcCCc----cccCccccceeeccccccc
Q 048796 130 LNLSGNGFSGAIPL--RSSHASELLVLPSYPPMESLDLSGNALTGVLPS----DIGNMGRLRLLNLANNHLS 195 (555)
Q Consensus 130 L~Ls~N~l~~~~p~--~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~ 195 (555)
|+|++|.+.. +|. .+.. +++|+.|++++|.++.. |. .+..+++|+.||++.|.+.
T Consensus 93 L~L~~N~i~~-~~~~~~l~~---------l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLVE-LGDLDPLAS---------LKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCCC-GGGGGGGGG---------CTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCCc-chhhHhhhc---------CCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888888753 332 3333 37788888888888743 44 3777788888888888765
No 138
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.53 E-value=8.8e-15 Score=144.24 Aligned_cols=88 Identities=28% Similarity=0.386 Sum_probs=72.2
Q ss_pred CHHHHhcccCCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceE
Q 048796 461 TAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 461 ~~~~l~~~~~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~ 538 (555)
..+|+.. .+.||+|+||+||+|++. ..||||.++.. .....+.|.+|+.+|++++|||||+++|+|.. +. .
T Consensus 34 ~~~~l~l--~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~--~ 106 (307)
T 3omv_A 34 EASEVML--STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN--L 106 (307)
T ss_dssp CTTSCCE--EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS--C
T ss_pred cHHHeEE--eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-Ce--E
Confidence 3344443 678999999999999984 35999998643 33446789999999999999999999998864 44 8
Q ss_pred EEEEeccCCCChhhhhC
Q 048796 539 LLLADYIQGDSLALHLY 555 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l~ 555 (555)
+||||||++|+|.++|+
T Consensus 107 ~iVmEy~~gGsL~~~l~ 123 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLH 123 (307)
T ss_dssp EEEEECCSSCBHHHHHH
T ss_pred EEEEEcCCCCCHHHHHh
Confidence 99999999999999873
No 139
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.52 E-value=8.9e-15 Score=149.90 Aligned_cols=83 Identities=22% Similarity=0.344 Sum_probs=75.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+. +|||||||++|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~--~~iVmEy~~gG 233 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGG 233 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTTE
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCE--EEEEEeCCCCC
Confidence 56899999999999997 6799999999976555556779999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 234 ~L~~~i 239 (423)
T 4fie_A 234 ALTDIV 239 (423)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 999876
No 140
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=6.3e-13 Score=136.62 Aligned_cols=100 Identities=10% Similarity=0.045 Sum_probs=47.7
Q ss_pred CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcC
Q 048796 30 SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVS 109 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 109 (555)
+|+.+.|..+ ++.+...+|... +|+.+.|.. .++.+...+|.++.+|+.++|.+|+++......|. +.+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 3445555443 444444444443 355555553 34434444555555555555555555533333444 3455555554
Q ss_pred CCcCCCCCchhhhCCCCCCeEEccC
Q 048796 110 SNQLKGPIPDNFFSSMALTNLNLSG 134 (555)
Q Consensus 110 ~N~l~~~~~~~~~~~~~L~~L~Ls~ 134 (555)
++ +......+|..+.+|+.+.+..
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCC
Confidence 32 4333344445555555555544
No 141
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=9.7e-17 Score=148.81 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=35.8
Q ss_pred CccEEEccCCcCCCCCCc------cccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCC
Q 048796 54 NLEILDLSSNKLSGSLPN------LTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMAL 127 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 127 (555)
.++.++++.|.+++..|. .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444433333 44444444444444444443 22 3444444444444444444 333333333444
Q ss_pred CeEEccCCccc
Q 048796 128 TNLNLSGNGFS 138 (555)
Q Consensus 128 ~~L~Ls~N~l~ 138 (555)
+.|+|++|.++
T Consensus 96 ~~L~L~~N~l~ 106 (198)
T 1ds9_A 96 EELWISYNQIA 106 (198)
T ss_dssp SEEEEEEEECC
T ss_pred CEEECcCCcCC
Confidence 44444444443
No 142
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=1.6e-13 Score=123.64 Aligned_cols=85 Identities=22% Similarity=0.324 Sum_probs=42.5
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEcc
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLS 133 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls 133 (555)
+|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 110 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLL 110 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeC
Confidence 34555555555554444445555555555555555554444444555555555555555554333344455555555555
Q ss_pred CCccc
Q 048796 134 GNGFS 138 (555)
Q Consensus 134 ~N~l~ 138 (555)
+|.+.
T Consensus 111 ~N~~~ 115 (170)
T 3g39_A 111 NNPWD 115 (170)
T ss_dssp SSCBC
T ss_pred CCCCC
Confidence 55544
No 143
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.49 E-value=6e-14 Score=137.21 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .++..||||.+... .....+.|.+|+.+|++++|||||+++++|.+. .....|+||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 45799999999999997 57899999999643 233467899999999999999999999998642 22237999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.++|
T Consensus 111 ~~gg~L~~~l 120 (290)
T 3fpq_A 111 MTSGTLKTYL 120 (290)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999886
No 144
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.49 E-value=2.2e-14 Score=141.22 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=73.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||+||+|+. .+|+.||||.+.... ....+.+.+|+.+|++++|||||++++++.+.+. .|+|||||
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~--~yivmEy~ 114 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK--LYFGLSYA 114 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEecC
Confidence 77999999999999997 689999999996432 2235779999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.++|
T Consensus 115 ~gG~L~~~i 123 (311)
T 4aw0_A 115 KNGELLKYI 123 (311)
T ss_dssp TTEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999886
No 145
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.48 E-value=2.5e-14 Score=141.53 Aligned_cols=84 Identities=21% Similarity=0.224 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC--ceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE--QERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|...+. ..+|||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 67899999999999998 689999999965432 12233456666778999999999999976432 237999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.++|+
T Consensus 86 gsL~~~l~ 93 (303)
T 3hmm_A 86 GSLFDYLN 93 (303)
T ss_dssp CBHHHHHH
T ss_pred CcHHHHHH
Confidence 99999873
No 146
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=2.6e-13 Score=122.24 Aligned_cols=106 Identities=18% Similarity=0.213 Sum_probs=75.4
Q ss_pred CCCEEECCCCcCCCCCCC-CCCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCC
Q 048796 9 TLSVLNLSSNSLSGTLPT-SLKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNN 87 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 87 (555)
..+.|++++|.|+. +|. ..++|++|+|++|+|+++.+..+..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCc-cCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 35677777777774 443 3456777777777777776777777777777777777777666666777777777777777
Q ss_pred cCCCCCchhccCCCCccEEEcCCCcCCC
Q 048796 88 SVTGTLPSLLEISPRLVTLDVSSNQLKG 115 (555)
Q Consensus 88 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 115 (555)
+|++..+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 7776666667777777777777777764
No 147
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=4.4e-16 Score=144.38 Aligned_cols=132 Identities=21% Similarity=0.228 Sum_probs=84.1
Q ss_pred CCCEEEcCCCcCCCCCcc------cccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCc
Q 048796 30 SCVILDLSRNMISGDISD------MQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRL 103 (555)
Q Consensus 30 ~L~~L~L~~N~l~~~~~~------~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 103 (555)
.++.++++.+.+.+..+. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444443332 55666778888888888875 55 6777888888888888887 556666667788
Q ss_pred cEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC
Q 048796 104 VTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL 174 (555)
Q Consensus 104 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~ 174 (555)
+.|+|++|++++ +| .+..+++|+.|+|++|.+++..+ +..+..+++|++|++++|.+++.+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~--------~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE--------IDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH--------HHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH--------HHHHhcCCCCCEEEecCCcccccc
Confidence 888888888874 44 56677777777777777663211 011222355666666666655443
No 148
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=4.4e-13 Score=121.25 Aligned_cols=104 Identities=17% Similarity=0.254 Sum_probs=59.9
Q ss_pred CEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCC
Q 048796 32 VILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSN 111 (555)
Q Consensus 32 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 111 (555)
+.+++++|+++.++..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSSCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 355555555554443322 34666666666666555555666666666666666666554445556666666666666
Q ss_pred cCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 112 QLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 112 ~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666444444556666666666666665
No 149
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.46 E-value=1.6e-15 Score=164.66 Aligned_cols=181 Identities=17% Similarity=0.105 Sum_probs=92.4
Q ss_pred CCCCccEEEccCCcCCCC-CCccccCCCCccEEEeeCCcCCCC-CchhccCCCCccEEEcC---------CCcCCCCCch
Q 048796 51 WEANLEILDLSSNKLSGS-LPNLTSQFDRLSTFNIRNNSVTGT-LPSLLEISPRLVTLDVS---------SNQLKGPIPD 119 (555)
Q Consensus 51 ~~~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~---------~N~l~~~~~~ 119 (555)
.+++|++|+|++|.+++. +...+..+++|++|++++| +... ++.....+++|++|++. .+.++.....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 345677777777776532 2223456677777777766 3321 22223346677777662 2344322222
Q ss_pred hhh-CCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEcc--C----CcCCCcCC-----ccccCcccccee
Q 048796 120 NFF-SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLS--G----NALTGVLP-----SDIGNMGRLRLL 187 (555)
Q Consensus 120 ~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls--~----N~l~~~~p-----~~~~~l~~L~~L 187 (555)
.+. .+++|+.|.+..|.+++.....+.. .+++|+.|+|+ + |.+++... ..+..+++|+.|
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~--------~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L 437 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIAR--------NRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRL 437 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHH--------HCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEE
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHh--------hCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEE
Confidence 222 3666777766666665433222211 12566666666 3 34442111 113445566666
Q ss_pred ecccccccCCCchhccC-CCCCCEEeCCCCcCCCCCChhhh---cCCCEEEeccCCCC
Q 048796 188 NLANNHLSGKMPSELSK-LGALEYLDLSGNQFKGEIPDKLS---LKLNEFNVSYNDLS 241 (555)
Q Consensus 188 ~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~---~~L~~L~ls~N~l~ 241 (555)
+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+. ++|+.|++++|+++
T Consensus 438 ~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 438 SLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp ECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred eecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 6655 444433333333 55666666666666543333331 55666666666664
No 150
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=5.4e-13 Score=120.64 Aligned_cols=104 Identities=17% Similarity=0.216 Sum_probs=68.7
Q ss_pred CCEEECCCCcCCCCCCCC-CCCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 10 LSVLNLSSNSLSGTLPTS-LKSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 10 L~~L~Ls~N~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
-+.+++++|+++ .+|.. .++|++|+|++|+|+++.+..+..+++|++|+|++|.|++..+..|..+++|++|+|++|+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEeCCCCCC-ccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 356677777765 34433 3466777777777776666666666667777777777765555556667777777777777
Q ss_pred CCCCCchhccCCCCccEEEcCCCcCC
Q 048796 89 VTGTLPSLLEISPRLVTLDVSSNQLK 114 (555)
Q Consensus 89 l~~~~~~~l~~l~~L~~L~L~~N~l~ 114 (555)
|++..+..|..+++|+.|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 77555555666777777777777665
No 151
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.44 E-value=2.2e-13 Score=134.17 Aligned_cols=85 Identities=18% Similarity=0.278 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----------ce
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----------QE 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----------~~ 537 (555)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|+.+|++++|||||++++++...+. ..
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 56899999999999997 6799999999965433 345779999999999999999999999864332 12
Q ss_pred EEEEEeccCCCChhhhh
Q 048796 538 RLLLADYIQGDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l 554 (555)
+|+|||||++|+|.+++
T Consensus 90 l~ivmE~~~gg~L~~~l 106 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWM 106 (299)
T ss_dssp EEEEEECCCSCCHHHHH
T ss_pred EEEEEecCCCCcHHHHH
Confidence 68999999999999876
No 152
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.43 E-value=1.1e-13 Score=137.75 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||+++.... +.+|+.+++.++|||||++++++.+.+. +|||||||+||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~--~~ivmEy~~gg 135 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPW--VNIFMELLEGG 135 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTE--EEEEECCCTTC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEeccCCC
Confidence 56799999999999997 6799999999975432 2479999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.++|
T Consensus 136 ~L~~~l 141 (336)
T 4g3f_A 136 SLGQLI 141 (336)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 999987
No 153
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.43 E-value=1e-13 Score=139.63 Aligned_cols=91 Identities=21% Similarity=0.304 Sum_probs=73.1
Q ss_pred CHHHHhcccCCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCC-CcceeeeEEEEc
Q 048796 461 TAEELSRAPAEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRH-PNIVPLRAYYWG 532 (555)
Q Consensus 461 ~~~~l~~~~~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H-~niv~l~g~~~~ 532 (555)
..+++.. .+.||+|+||.||+|++. .++.||||.+..... ...++|.+|+.+|.+++| ||||+++|+|..
T Consensus 62 ~~~~~~l--~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 62 PRDRLKL--GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp CGGGEEE--EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred cHHHeEE--eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3344444 678999999999999862 246899999976543 346789999999999965 899999999975
Q ss_pred C-CCceEEEEEeccCCCChhhhhC
Q 048796 533 P-REQERLLLADYIQGDSLALHLY 555 (555)
Q Consensus 533 ~-~~~~~~lv~e~~~~GsL~~~l~ 555 (555)
. +. +++|||||++|+|.++|+
T Consensus 140 ~~~~--~~iV~Ey~~~G~L~~~L~ 161 (353)
T 4ase_A 140 PGGP--LMVIVEFCKFGNLSTYLR 161 (353)
T ss_dssp TTSC--CEEEEECCTTEEHHHHHH
T ss_pred cCCE--EEEEEEcCCCCCHHHHHH
Confidence 4 34 899999999999999873
No 154
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.42 E-value=2.3e-12 Score=132.46 Aligned_cols=227 Identities=12% Similarity=0.131 Sum_probs=177.4
Q ss_pred CCCCEEECCCCcCCCCCCCCCC--CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEee
Q 048796 8 TTLSVLNLSSNSLSGTLPTSLK--SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIR 85 (555)
Q Consensus 8 ~~L~~L~Ls~N~l~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 85 (555)
.+|+.++|..| ++.+-..+|. +|+.+.|.+ .++.+....|..+.+|+.++|.+|.++......|. ..+|+.+.|.
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CCccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 37999999877 6644444553 688999986 78878888999999999999999999966666676 6899999998
Q ss_pred CCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEc
Q 048796 86 NNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDL 165 (555)
Q Consensus 86 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~L 165 (555)
++ ++.+...+|..+++|+.++|..| ++.....+|.. .+|+.+.|. +.++.....+|..+ ++|+.+++
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c---------~~L~~l~l 278 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYC---------PELAEVTT 278 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTC---------TTCCEEEE
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCC---------CCCCEEEe
Confidence 54 77677789999999999999876 55444555655 799999995 44665555566555 89999999
Q ss_pred cCCcCC-----CcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh-cCCCEEEeccCC
Q 048796 166 SGNALT-----GVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS-LKLNEFNVSYND 239 (555)
Q Consensus 166 s~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~L~~L~ls~N~ 239 (555)
.+|.+. .+.+.+|.+|++|+.++|. +.++.....+|.++++|+.++|..| ++......|. .+|+.+++++|.
T Consensus 279 ~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 279 YGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp ESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSS
T ss_pred CCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCC
Confidence 998875 4667789999999999999 4587777789999999999999665 6644455554 589999999998
Q ss_pred CCCCcCccccCCC
Q 048796 240 LSGPIPENLRNFP 252 (555)
Q Consensus 240 l~~~~p~~l~~~~ 252 (555)
+....+..|..++
T Consensus 357 ~~~l~~~~F~~~~ 369 (401)
T 4fdw_A 357 PPQVFEKVWYGFP 369 (401)
T ss_dssp CCBCCCSSCCCSC
T ss_pred CcccccccccCCC
Confidence 8755544454443
No 155
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.41 E-value=7.6e-15 Score=159.39 Aligned_cols=235 Identities=19% Similarity=0.185 Sum_probs=111.5
Q ss_pred CCCCCEEECCCCcCCCCCC----CCCCCCCEEEcCCC-cCCCC-CcccccCCCCccEEEccCCcCCCCCCccc----cCC
Q 048796 7 STTLSVLNLSSNSLSGTLP----TSLKSCVILDLSRN-MISGD-ISDMQNWEANLEILDLSSNKLSGSLPNLT----SQF 76 (555)
Q Consensus 7 ~~~L~~L~Ls~N~l~~~~~----~~l~~L~~L~L~~N-~l~~~-~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~----~~l 76 (555)
+++|++|+|++|.+++..+ ..+++|++|+|++| .++.. .+.....+++|++|+|++|.+++..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 4455555555555543222 12445555555555 33221 12223334455555555555543322222 234
Q ss_pred CCccEEEeeCCc--CCC-CCchhccCCCCccEEEcCCC-cCCCCCchhhhCCCCCCeEEccCCc-------ccccCCcCc
Q 048796 77 DRLSTFNIRNNS--VTG-TLPSLLEISPRLVTLDVSSN-QLKGPIPDNFFSSMALTNLNLSGNG-------FSGAIPLRS 145 (555)
Q Consensus 77 ~~L~~L~L~~N~--l~~-~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~N~-------l~~~~p~~~ 145 (555)
++|++|+|++|. +.. .+...+..+++|+.|+|++| .+. .++..+..+++|+.|++..+. +.+. +..+
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l 261 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVAL 261 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHH-HHHH
Confidence 455555555554 110 01111233455555555555 222 244444455555555543331 1100 0011
Q ss_pred ccccccccc---------------CCCCCcCEEEccCCcCCCcCCc-cccCccccceeecccccccCC-CchhccCCCCC
Q 048796 146 SHASELLVL---------------PSYPPMESLDLSGNALTGVLPS-DIGNMGRLRLLNLANNHLSGK-MPSELSKLGAL 208 (555)
Q Consensus 146 ~~~~~l~~l---------------~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L 208 (555)
..+..+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++| ++.. ++.....+++|
T Consensus 262 ~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp HTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred hcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 111111110 1347788888888887643222 2456788888888877 4322 22222346778
Q ss_pred CEEeC---------CCCcCCCCCChhhh---cCCCEEEeccCCCCCCc
Q 048796 209 EYLDL---------SGNQFKGEIPDKLS---LKLNEFNVSYNDLSGPI 244 (555)
Q Consensus 209 ~~L~L---------s~N~l~~~~p~~~~---~~L~~L~ls~N~l~~~~ 244 (555)
+.|++ +.|.+++.....+. ++|+.|+++.|.+++..
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~ 388 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAA 388 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHH
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHH
Confidence 88877 33455532222222 57788877777776543
No 156
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.40 E-value=2.3e-13 Score=131.93 Aligned_cols=82 Identities=21% Similarity=0.376 Sum_probs=67.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||+||+|+. .+|+.||||.++.... ...+.+.+|+.+|++++|||||++++++.+.+. .|+|||||
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~--~~ivmEy~ 95 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE--IIMVIEYA 95 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE--EEEEEeCC
Confidence 67899999999999997 6799999999965322 235679999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+|+|.++|
T Consensus 96 -~g~L~~~l 103 (275)
T 3hyh_A 96 -GNELFDYI 103 (275)
T ss_dssp -CEEHHHHH
T ss_pred -CCCHHHHH
Confidence 67998875
No 157
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.37 E-value=1.3e-13 Score=135.64 Aligned_cols=83 Identities=24% Similarity=0.393 Sum_probs=66.3
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||+||+|+. .+++.||||.++.... .....+.+|+.+|++++|||||++++++.+.+. .|+|||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~--~~ivmE 106 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK--LYLILD 106 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTE--EEEEEC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE--EEEEEE
Confidence 67999999999999985 2578999999965322 234568899999999999999999999998777 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||+||+|.++|
T Consensus 107 y~~gg~L~~~l 117 (304)
T 3ubd_A 107 FLRGGDLFTRL 117 (304)
T ss_dssp CCTTCEEHHHH
T ss_pred cCCCCCHHHHH
Confidence 99999999876
No 158
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=7.9e-15 Score=149.36 Aligned_cols=161 Identities=19% Similarity=0.165 Sum_probs=71.9
Q ss_pred CccEEEccCCcCCCCCCcccc-----CCCCccEEEeeCCcCCCCCchhc-cCCCCccEEEcCCCcCCCCCchhh-----h
Q 048796 54 NLEILDLSSNKLSGSLPNLTS-----QFDRLSTFNIRNNSVTGTLPSLL-EISPRLVTLDVSSNQLKGPIPDNF-----F 122 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~-----~ 122 (555)
+|+.|+|++|.|+......+. ...+|++|+|++|.|+......+ ..+++|+.|+|++|.|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 466666666666532222221 12456666666666543222222 233456666666666543222222 1
Q ss_pred CCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC----CccccCccccceeecccccccCC-
Q 048796 123 SSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL----PSDIGNMGRLRLLNLANNHLSGK- 197 (555)
Q Consensus 123 ~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~- 197 (555)
..++|+.|+|++|.|+......+.. .+...++|++|+|++|.|++.. +..+..+++|+.|+|++|.|++.
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~-----~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g 227 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLME-----GLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTA 227 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHH-----HHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHH-----HHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHH
Confidence 2345556666655554321111110 0112245555555555554321 22333444555555555555432
Q ss_pred ---CchhccCCCCCCEEeCCCCcCC
Q 048796 198 ---MPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 198 ---~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
+...+...++|++|||++|.|+
T Consensus 228 ~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 228 ALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHHHHHhCCCCCEEeccCCCCC
Confidence 1222233455555555555554
No 159
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.35 E-value=1.2e-12 Score=140.76 Aligned_cols=83 Identities=22% Similarity=0.423 Sum_probs=75.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.+|+.++|||||++++++.+.+. +|+|||||++|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~--~~iv~E~~~gg 239 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE--MVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSE--EEEEEECCCCC
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE--EEEEEeecCCC
Confidence 67899999999999997 6899999999977666667789999999999999999999999998776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.++|
T Consensus 240 ~L~~~i 245 (573)
T 3uto_A 240 ELFEKV 245 (573)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 999876
No 160
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=1.8e-14 Score=146.67 Aligned_cols=172 Identities=19% Similarity=0.149 Sum_probs=121.4
Q ss_pred CCCCCEEEcCCCcCCCCCccc----cc-CCCCccEEEccCCcCCCCCCccc-cCCCCccEEEeeCCcCCCCCchhc----
Q 048796 28 LKSCVILDLSRNMISGDISDM----QN-WEANLEILDLSSNKLSGSLPNLT-SQFDRLSTFNIRNNSVTGTLPSLL---- 97 (555)
Q Consensus 28 l~~L~~L~L~~N~l~~~~~~~----~~-~~~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l---- 97 (555)
++.|+.|+|++|.|+...... +. ...+|++|+|++|.|++.....+ ..+.+|++|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 357899999999997543222 22 23579999999999875333322 346789999999999985544443
Q ss_pred -cCCCCccEEEcCCCcCCC----CCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCC
Q 048796 98 -EISPRLVTLDVSSNQLKG----PIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTG 172 (555)
Q Consensus 98 -~~l~~L~~L~L~~N~l~~----~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~ 172 (555)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+......+.. .+...++|+.|+|++|.|++
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~-----~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA-----QLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH-----HGGGCSCCCEEECCSSCCCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH-----HHhcCCCcCeEECCCCCCCH
Confidence 346889999999999864 23445577899999999999987532211111 12233789999999999986
Q ss_pred cCC----ccccCccccceeecccccccCCCchhccC
Q 048796 173 VLP----SDIGNMGRLRLLNLANNHLSGKMPSELSK 204 (555)
Q Consensus 173 ~~p----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 204 (555)
... ..+..+++|+.|+|++|.|+......+..
T Consensus 226 ~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 226 TAALALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 433 34455689999999999998655555543
No 161
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=6.3e-12 Score=126.88 Aligned_cols=131 Identities=21% Similarity=0.144 Sum_probs=76.3
Q ss_pred EEcCCC-cCCCCCchhhhCCCCCCeEEccC-CcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccc
Q 048796 106 LDVSSN-QLKGPIPDNFFSSMALTNLNLSG-NGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGR 183 (555)
Q Consensus 106 L~L~~N-~l~~~~~~~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 183 (555)
++++++ +|+ .+|. +..+.+|+.|+|++ |.|++..+..|..+ ++|+.|+|++|+|++..|..|..+++
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l---------~~L~~L~l~~N~l~~~~~~~~~~l~~ 81 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGL---------GELRNLTIVKSGLRFVAPDAFHFTPR 81 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSC---------CCCSEEECCSSCCCEECTTGGGSCSC
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccc---------cCCCEEECCCCccceeCHHHhcCCcC
Confidence 455554 554 3444 55555555555553 55555444444444 66666666666666666667777777
Q ss_pred cceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChh-hh--cCCCEEEeccCCCCCCcCccc
Q 048796 184 LRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDK-LS--LKLNEFNVSYNDLSGPIPENL 248 (555)
Q Consensus 184 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~--~~L~~L~ls~N~l~~~~p~~l 248 (555)
|+.|+|++|+|++..+..|..++ |+.|+|++|.|....... +. .......+..+.+.|..|..+
T Consensus 82 L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~~l 148 (347)
T 2ifg_A 82 LSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPL 148 (347)
T ss_dssp CCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSSCS
T ss_pred CCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCChHH
Confidence 77777777777765555555554 778888888777543322 11 122223345566676666533
No 162
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.28 E-value=4.6e-12 Score=129.69 Aligned_cols=85 Identities=18% Similarity=0.289 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.+|+.++|||||++++++.... ...+|+||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 67899999999999997 689999999996532 234577899999999999999999999876431 12389999
Q ss_pred eccCCCChhhhhC
Q 048796 543 DYIQGDSLALHLY 555 (555)
Q Consensus 543 e~~~~GsL~~~l~ 555 (555)
|||+ |+|.++|+
T Consensus 139 E~~~-g~L~~~i~ 150 (398)
T 4b99_A 139 DLME-SDLHQIIH 150 (398)
T ss_dssp ECCS-EEHHHHHT
T ss_pred eCCC-CCHHHHHH
Confidence 9996 67988763
No 163
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.26 E-value=8.6e-12 Score=124.39 Aligned_cols=83 Identities=25% Similarity=0.448 Sum_probs=75.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.++||+|+||.||+|+..+|+.||||++........+.|.+|+.+++.++||||+++++++...+. .++||||+++|+
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~~~ 121 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE--MILIYKYMENGN 121 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC--CEEEEECCTTCB
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe--EEEEEEcCCCCc
Confidence 789999999999999988899999999876655567889999999999999999999999987776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 122 L~~~l 126 (321)
T 2qkw_B 122 LKRHL 126 (321)
T ss_dssp TGGGS
T ss_pred HHHHH
Confidence 99876
No 164
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.26 E-value=1.2e-11 Score=122.56 Aligned_cols=83 Identities=27% Similarity=0.447 Sum_probs=75.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||.||+|+. .++..||+|.+........+.|.+|+.++.+++||||+++++++...+. .++||||+++|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~~ 92 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKR--LNFITEYIKGG 92 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECCTTC
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCe--eEEEEEecCCC
Confidence 78999999999999997 5799999999976666667889999999999999999999999998776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 93 ~L~~~l 98 (310)
T 3s95_A 93 TLRGII 98 (310)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 999876
No 165
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.25 E-value=1.5e-11 Score=122.70 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=73.9
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.++++++||||+++++++...+. .++||||+++|+
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~~~~ 128 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE--LWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEECCCCSCB
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCE--EEEEEecCCCCC
Confidence 4799999999999998 4799999999976655567889999999999999999999999988776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 129 L~~~l 133 (321)
T 2c30_A 129 LTDIV 133 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 166
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.23 E-value=2e-11 Score=120.38 Aligned_cols=83 Identities=23% Similarity=0.370 Sum_probs=74.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.+++.++||||+++++++...+. .++||||+++|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~~ 102 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 102 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTTC
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCE--EEEEEECCCCC
Confidence 78999999999999996 6799999999976555556789999999999999999999999988776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 103 ~L~~~~ 108 (297)
T 3fxz_A 103 SLTDVV 108 (297)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 999875
No 167
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.22 E-value=1.7e-11 Score=131.78 Aligned_cols=91 Identities=22% Similarity=0.374 Sum_probs=71.8
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHH---HHHHHHHHcCCCCcceeeeEEEEc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEF---AKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~---~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
++++|... .++||+|+||.||+|+. .+|+.||||.++.... .....+ ..++.+++.++|||||++++++.+
T Consensus 186 ~slddf~i--~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~ 263 (689)
T 3v5w_A 186 LTMNDFSV--HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 263 (689)
T ss_dssp CCGGGEEE--EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred CchHHeEE--EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence 44444443 67999999999999997 6799999999964321 122223 344667788999999999999998
Q ss_pred CCCceEEEEEeccCCCChhhhh
Q 048796 533 PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. +|+|||||+||+|.++|
T Consensus 264 ~~~--lylVmEy~~GGdL~~~l 283 (689)
T 3v5w_A 264 PDK--LSFILDLMNGGDLHYHL 283 (689)
T ss_dssp SSE--EEEEECCCCSCBHHHHH
T ss_pred CCE--EEEEEecCCCCcHHHHH
Confidence 877 99999999999999886
No 168
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=3.1e-11 Score=121.77 Aligned_cols=66 Identities=24% Similarity=0.219 Sum_probs=27.4
Q ss_pred ccCCCCccEEEeeC-CcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCccc
Q 048796 73 TSQFDRLSTFNIRN-NSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 73 ~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+..+.+|++|+|++ |.|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 93 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc
Confidence 33444444444442 4444333334444444444444444444333334444444444444444444
No 169
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.19 E-value=2.5e-11 Score=123.71 Aligned_cols=83 Identities=22% Similarity=0.422 Sum_probs=69.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||.||+|+. .+|+.||||.++.......+.|.+|+.++.+++||||+++++++...+. .++||||+++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~E~~~~~ 171 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKND--IVLVMEYVDGG 171 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECCTTC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE--EEEEEeCCCCC
Confidence 46799999999999997 6799999999987666667889999999999999999999999998766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 172 ~L~~~l 177 (373)
T 2x4f_A 172 ELFDRI 177 (373)
T ss_dssp EEHHHH
T ss_pred cHHHHH
Confidence 998765
No 170
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.18 E-value=3e-11 Score=123.17 Aligned_cols=83 Identities=24% Similarity=0.496 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+.. ++..||||.++... ....+.|.+|+.++++++||||++++++|...+. .++||||
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 127 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP--VMIVTEY 127 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS--CEEEEEC
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc--eEEEEeC
Confidence 789999999999999863 57789999997643 3346789999999999999999999999987776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 128 ~~~~sL~~~l 137 (373)
T 2qol_A 128 MENGSLDSFL 137 (373)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 171
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.17 E-value=2.9e-11 Score=122.37 Aligned_cols=81 Identities=16% Similarity=0.263 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||+||+|+. ..++.||||.+.... ....+.+|+.+|..+ +|||||++++++.+.+. .|+||||
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~--~~lvmE~ 101 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH--VVIAMPY 101 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE--EEEEEEC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE--EEEEEeC
Confidence 67899999999999975 246789999986543 346788999999988 69999999999988777 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 102 ~~g~~L~~~~ 111 (361)
T 4f9c_A 102 LEHESFLDIL 111 (361)
T ss_dssp CCCCCHHHHH
T ss_pred CCcccHHHHH
Confidence 9999999876
No 172
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.17 E-value=6.6e-11 Score=114.69 Aligned_cols=82 Identities=17% Similarity=0.295 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|+..++..||||.+..... ..+++.+|+.++.+++||||+++++++...+. .++||||+++|+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 91 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVFEFMEHGC 91 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--EEEEEECCTTCB
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc--eEEEEEeCCCCc
Confidence 678999999999999987888999999975432 35779999999999999999999999988777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 92 L~~~l 96 (269)
T 4hcu_A 92 LSDYL 96 (269)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
No 173
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.16 E-value=7.7e-11 Score=117.87 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=73.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||++
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~--~~lv~e~~~ 97 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKT--LYLIMEYAS 97 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCT
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE--EEEEEECCC
Confidence 67899999999999997 68999999999653 23345678999999999999999999999987766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 98 ~~~L~~~l 105 (328)
T 3fe3_A 98 GGEVFDYL 105 (328)
T ss_dssp TCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998876
No 174
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.16 E-value=3e-11 Score=120.66 Aligned_cols=95 Identities=34% Similarity=0.544 Sum_probs=78.3
Q ss_pred cccCHHHHhccc-----CCeeecCCceEEEEEEeCCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 458 LAFTAEELSRAP-----AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 458 ~~~~~~~l~~~~-----~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
..|+.+++.... .+.||+|+||.||+|+..+|+.||||++...... ....|.+|+.+++.++||||++++++|.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 346666666553 5789999999999999878999999999754332 2347899999999999999999999998
Q ss_pred cCCCceEEEEEeccCCCChhhhh
Q 048796 532 GPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
..+. .++||||+++|+|.+++
T Consensus 98 ~~~~--~~lv~e~~~~~~L~~~l 118 (326)
T 3uim_A 98 TPTE--RLLVYPYMANGSVASCL 118 (326)
T ss_dssp CSSC--CEEEEECCTTCBHHHHH
T ss_pred cCCc--eEEEEEeccCCCHHHHH
Confidence 7776 89999999999998876
No 175
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.16 E-value=4.2e-11 Score=117.38 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.|.+|+..+.+++||||+++++++...+. .|+||||+
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 113 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAG--GLVVAEWI 113 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCc--EEEEEEec
Confidence 67899999999999998 4689999999975432 234789999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 114 ~g~~L~~~l 122 (286)
T 3uqc_A 114 RGGSLQEVA 122 (286)
T ss_dssp CEEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999876
No 176
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.15 E-value=3.3e-11 Score=123.11 Aligned_cols=83 Identities=25% Similarity=0.414 Sum_probs=72.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++ .+++.||||.++.... ...+.|.+|+.+|++++||||++++++|...+. .++||||+++
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~~ 196 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP--IYIVMELVQG 196 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS--CEEEEECCTT
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC--cEEEEEcCCC
Confidence 67899999999999998 4789999999875432 234578999999999999999999999987776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 197 g~L~~~l 203 (377)
T 3cbl_A 197 GDFLTFL 203 (377)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
No 177
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.15 E-value=6.8e-11 Score=119.88 Aligned_cols=83 Identities=24% Similarity=0.403 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh------cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR------HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++..++||||+++++++..... .++||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~~lv~ 94 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD--VVLIL 94 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE--EEEEE
Confidence 67899999999999997 57999999999653221 35789999999999999999999999988766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 95 e~~~gg~L~~~l 106 (361)
T 2yab_A 95 ELVSGGELFDFL 106 (361)
T ss_dssp ECCCSCBHHHHH
T ss_pred EcCCCCcHHHHH
Confidence 999999999876
No 178
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.15 E-value=9.5e-11 Score=113.43 Aligned_cols=82 Identities=20% Similarity=0.308 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...++..||||.+..... ..+++.+|+.++.+++||||+++++++..... .++||||+++|+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 89 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP--IYIVTEYISNGC 89 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--EEEEEECCTTCB
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCc--eEEEEEccCCCc
Confidence 678999999999999988888899999975433 35779999999999999999999999987777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 90 L~~~l 94 (268)
T 3sxs_A 90 LLNYL 94 (268)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 179
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.14 E-value=6.9e-11 Score=118.65 Aligned_cols=83 Identities=20% Similarity=0.368 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+++. .+|+.||+|.++... ....+.+.+|+.++..++||||+++++++...+. .++||||+
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~--~~lv~E~~ 87 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR--LCFVMEYA 87 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCE--EEEEEeCC
Confidence 67899999999999997 579999999996532 2235678999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 88 ~gg~L~~~l 96 (337)
T 1o6l_A 88 NGGELFFHL 96 (337)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998775
No 180
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.14 E-value=4.1e-11 Score=117.81 Aligned_cols=85 Identities=24% Similarity=0.432 Sum_probs=73.3
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++ .+++.||||++........+.|.+|+.++.+++||||++++++|...+....++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 67899999999999984 3688999999987666667889999999999999999999999865332238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 95 ~~~~~L~~~l 104 (295)
T 3ugc_A 95 LPYGSLRDYL 104 (295)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
No 181
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.14 E-value=8.6e-11 Score=116.54 Aligned_cols=82 Identities=30% Similarity=0.398 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .|+.||||.+.... ....+.|.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~ 118 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN--LSIVTEYLSR 118 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC--CEEEEECCTT
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc--eEEEEecCCC
Confidence 67899999999999988 68899999986543 2335679999999999999999999999987777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 119 ~~L~~~l 125 (309)
T 3p86_A 119 GSLYRLL 125 (309)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9999876
No 182
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.14 E-value=5.9e-11 Score=118.61 Aligned_cols=83 Identities=24% Similarity=0.483 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|++. .+..||||.+... .....+.|.+|+.++++++||||+++++++...+. .++||||
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~ 131 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL--AMIVTEY 131 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC--CEEEEEC
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc--cEEEeeC
Confidence 679999999999999972 3456999999764 33346789999999999999999999999987766 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 132 ~~~~~L~~~l 141 (325)
T 3kul_A 132 MENGSLDTFL 141 (325)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 183
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.14 E-value=1.6e-10 Score=114.12 Aligned_cols=93 Identities=25% Similarity=0.377 Sum_probs=78.5
Q ss_pred ccCHHHHhccc-----------CCeeecCCceEEEEEEeCCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCCCcc
Q 048796 459 AFTAEELSRAP-----------AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRHPNI 523 (555)
Q Consensus 459 ~~~~~~l~~~~-----------~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H~ni 523 (555)
.|+++++..++ ++.||+|+||.||+|+. +++.||||.+.... ....+.|.+|+.+++.++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 47777776654 26899999999999998 68899999986432 2335789999999999999999
Q ss_pred eeeeEEEEcCCCceEEEEEeccCCCChhhhh
Q 048796 524 VPLRAYYWGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 524 v~l~g~~~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
+++++++...+. .++||||+++|+|.+++
T Consensus 93 ~~~~~~~~~~~~--~~lv~e~~~~~~L~~~l 121 (307)
T 2nru_A 93 VELLGFSSDGDD--LCLVYVYMPNGSLLDRL 121 (307)
T ss_dssp CCEEEEECSSSS--CEEEEECCTTCBHHHHH
T ss_pred EEEEEEEecCCc--eEEEEEecCCCcHHHHH
Confidence 999999987776 99999999999998875
No 184
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.14 E-value=1.2e-10 Score=119.19 Aligned_cols=83 Identities=18% Similarity=0.389 Sum_probs=74.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|.. .+|+.+|+|.+..........+.+|+.++..++||||+++++++..... .++||||+++|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~lv~E~~~gg 133 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE--MVLILEFLSGG 133 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE--EEEEEECCCCC
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCE--EEEEEEcCCCC
Confidence 67899999999999997 5789999999977655566789999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 134 ~L~~~l 139 (387)
T 1kob_A 134 ELFDRI 139 (387)
T ss_dssp BHHHHT
T ss_pred cHHHHH
Confidence 998876
No 185
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.13 E-value=9.2e-11 Score=118.54 Aligned_cols=83 Identities=19% Similarity=0.397 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++..++||||+++++++...+. .++|||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~e 106 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM--LYMVFE 106 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEE
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEEe
Confidence 67899999999999997 579999999985321 1236789999999999999999999999988776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
||++|+|.+++
T Consensus 107 ~~~g~~L~~~l 117 (351)
T 3c0i_A 107 FMDGADLCFEI 117 (351)
T ss_dssp CCSSCBHHHHH
T ss_pred CCCCCCHHHHH
Confidence 99999997654
No 186
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.13 E-value=1e-10 Score=122.40 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+ .|+.||||.++... ..+.|.+|+.+|++++||||++++++|...+. ..++|||||++|+
T Consensus 198 ~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEECCTTCB
T ss_pred EeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEEecCCCc
Confidence 67899999999999998 57899999997643 45789999999999999999999999876542 2899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 274 L~~~l 278 (450)
T 1k9a_A 274 LVDYL 278 (450)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
No 187
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.13 E-value=1.2e-10 Score=115.94 Aligned_cols=85 Identities=19% Similarity=0.320 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++........++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 67999999999999998 5699999999975432 346778999999999999999999999987653338999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 94 ~~L~~~l 100 (319)
T 4euu_A 94 GSLYTVL 100 (319)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9998876
No 188
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.13 E-value=1.5e-10 Score=114.95 Aligned_cols=83 Identities=18% Similarity=0.272 Sum_probs=73.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
+++||+|+||.||+|+. .+++.||||.+........+.+.+|+.++.++ +||||+++++++...+. .++||||+++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 95 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR--FYLVFEKMRG 95 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCTT
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE--EEEEEEcCCC
Confidence 46899999999999996 57999999999765555577899999999884 79999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 96 ~~L~~~l 102 (316)
T 2ac3_A 96 GSILSHI 102 (316)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998876
No 189
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.13 E-value=8.3e-11 Score=115.14 Aligned_cols=83 Identities=18% Similarity=0.267 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEe-CCC-------CEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSG-------HMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g-------~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .++ ..||+|.+........+.|.+|+.++++++||||+++++++...+. .++|
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv 90 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE--NILV 90 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC--CEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC--CEEE
Confidence 67899999999999986 334 4799999977666667889999999999999999999999988776 8999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 91 ~e~~~~~~L~~~l 103 (289)
T 4fvq_A 91 QEFVKFGSLDTYL 103 (289)
T ss_dssp EECCTTCBHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 9999999999876
No 190
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.13 E-value=1.7e-10 Score=115.37 Aligned_cols=83 Identities=20% Similarity=0.404 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|..||||.+..... ...+.+.+|+.++..++||||+++++++..... .++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~ 93 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD--VILIL 93 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEE
Confidence 67899999999999997 5799999999864322 136789999999999999999999999987766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 94 e~~~~~~L~~~l 105 (326)
T 2y0a_A 94 ELVAGGELFDFL 105 (326)
T ss_dssp ECCCSCBHHHHH
T ss_pred EcCCCCCHHHHH
Confidence 999999999876
No 191
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.13 E-value=8.2e-11 Score=119.79 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .++..||||.++... ....+.+.+|+.++..+ +||||++++++|...+. .|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~--~~ 163 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP--LY 163 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS--CE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC--EE
Confidence 67899999999999985 235679999997543 33457899999999999 89999999999988777 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 164 lv~e~~~~g~L~~~l 178 (370)
T 2psq_A 164 VIVEYASKGNLREYL 178 (370)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEEcCCCCCHHHHH
Confidence 999999999999876
No 192
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.13 E-value=1e-10 Score=117.83 Aligned_cols=83 Identities=17% Similarity=0.280 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+++
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~--~~lv~E~~~g 92 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANK--IFMVLEYCPG 92 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE--EEEEEeCCCC
Confidence 67899999999999997 6899999999865432 234578999999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 93 g~L~~~l 99 (347)
T 3zgw_A 93 GELFDYI 99 (347)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9998875
No 193
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.13 E-value=9.5e-11 Score=116.88 Aligned_cols=82 Identities=23% Similarity=0.341 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|..+|+|.+.... ...+.+.+|+.++..++||||+++++++.+.+. .++||||+++|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~e~~~g~ 86 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEE--LVMIFEFISGL 86 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTE--EEEEECCCCCC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCE--EEEEEEeCCCC
Confidence 67899999999999997 578899999987543 345678999999999999999999999988776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 87 ~L~~~l 92 (321)
T 1tki_A 87 DIFERI 92 (321)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 999876
No 194
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.12 E-value=1.3e-10 Score=113.45 Aligned_cols=82 Identities=20% Similarity=0.319 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+.++..||||.+..... ..+++.+|+.++.+++||||+++++++...+. .++||||+++|+
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 105 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP--IFIITEYMANGC 105 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--EEEEECCCTTCB
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCC--eEEEEeccCCCc
Confidence 678999999999999998888999999975433 35779999999999999999999999987777 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 106 L~~~l 110 (283)
T 3gen_A 106 LLNYL 110 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 195
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.12 E-value=1.7e-10 Score=115.15 Aligned_cols=64 Identities=20% Similarity=0.367 Sum_probs=54.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP 533 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~ 533 (555)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||++++++|...
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 76 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLET 76 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEEC
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEe
Confidence 67899999999999998 489999999996533 23467899999999999999999999998654
No 196
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.12 E-value=6e-11 Score=125.67 Aligned_cols=82 Identities=22% Similarity=0.327 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|++. ++..||||.++.... ..++|.+|+.+|++++||||++++++|...+. .++|||||++|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--~~lv~E~~~~g 301 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYG 301 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEEECCTTC
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCc--EEEEEEccCCC
Confidence 678999999999999984 588999999976433 46789999999999999999999999987777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.++|
T Consensus 302 ~L~~~l 307 (495)
T 1opk_A 302 NLLDYL 307 (495)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 999876
No 197
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.11 E-value=8.9e-11 Score=122.98 Aligned_cols=81 Identities=21% Similarity=0.338 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+.++..||||.++... ...+.|.+|+.+|+.++||||+++++++. .+. .++|||||++|+
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~--~~lv~e~~~~g~ 268 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP--IYIITEFMAKGS 268 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS--CEEEECCCTTCB
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc--cEEEEeecCCCc
Confidence 67899999999999999778899999997643 34688999999999999999999999986 344 899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.++|
T Consensus 269 L~~~l 273 (454)
T 1qcf_A 269 LLDFL 273 (454)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99886
No 198
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.11 E-value=7.4e-11 Score=114.16 Aligned_cols=84 Identities=25% Similarity=0.419 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|++ .|..+|||.+.... ....+.|.+|+.++++++||||+++++++...+....++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 67899999999999998 58899999997542 3345789999999999999999999999987632238999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 94 ~~L~~~l 100 (271)
T 3kmu_A 94 GSLYNVL 100 (271)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9999876
No 199
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.11 E-value=1.8e-10 Score=111.97 Aligned_cols=83 Identities=22% Similarity=0.311 Sum_probs=74.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .++..+|+|++........+.+.+|+.++++++||||+++++++...+. .++||||+++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 91 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTD--IYLVMELCTGG 91 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECCCSC
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCe--EEEEEeccCCC
Confidence 67899999999999997 5678999999976555567889999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 92 ~L~~~~ 97 (277)
T 3f3z_A 92 ELFERV 97 (277)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 998765
No 200
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.11 E-value=1e-10 Score=116.49 Aligned_cols=83 Identities=20% Similarity=0.360 Sum_probs=72.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+|+.||+|.++... ....+.+.+|+.+++.++||||+++++++.+.+. .++||||+
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~--~~lv~e~~ 88 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ--IFMIMDYI 88 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCE--EEEEEeCC
Confidence 67899999999999997 579999999996532 1235678899999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 89 ~gg~L~~~l 97 (318)
T 1fot_A 89 EGGELFSLL 97 (318)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999999876
No 201
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.10 E-value=7.3e-11 Score=117.84 Aligned_cols=83 Identities=18% Similarity=0.216 Sum_probs=70.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+++
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~e~~~~ 89 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI--QYLFLEYCSG 89 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEECCTT
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe--EEEEEEcCCC
Confidence 67899999999999997 5799999999864432 234678999999999999999999999998776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 90 ~~L~~~l 96 (323)
T 3tki_A 90 GELFDRI 96 (323)
T ss_dssp EEGGGGS
T ss_pred CcHHHHH
Confidence 9998876
No 202
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.10 E-value=1.4e-10 Score=116.75 Aligned_cols=83 Identities=20% Similarity=0.286 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-----ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-----LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .++..||+|.+... .....+.+.+|+.++++++||||+++++++...+. .++|||
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e 108 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY--ICLVME 108 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEE
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe--EEEEEe
Confidence 67899999999999997 67889999998543 22345789999999999999999999999988776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 109 ~~~gg~L~~~l 119 (345)
T 3hko_A 109 LCHGGHLLDKL 119 (345)
T ss_dssp CCCSCBHHHHE
T ss_pred CCCCCcHHHHH
Confidence 99999999876
No 203
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.10 E-value=1.4e-10 Score=114.11 Aligned_cols=83 Identities=23% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||+|.+.... ....+.|.+|+.++.+++||||+++++++...+. .++||||+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 93 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC--YYLVMEYI 93 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCe--EEEEEeCC
Confidence 67899999999999997 578999999985432 2335779999999999999999999999987776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~g~~L~~~l 102 (294)
T 4eqm_A 94 EGPTLSEYI 102 (294)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999999875
No 204
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.10 E-value=1.6e-10 Score=113.35 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
..+||+|+||.||+|+. .+++.||||.+........+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~~ 104 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF--IKIFMEQVPGG 104 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCSEE
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCc--EEEEEEeCCCC
Confidence 45899999999999997 6789999999976655556789999999999999999999999987776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 105 ~L~~~l 110 (295)
T 2clq_A 105 SLSALL 110 (295)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 998875
No 205
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.10 E-value=1.2e-10 Score=121.93 Aligned_cols=82 Identities=22% Similarity=0.356 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|.+.++..||||.++.... ..++|.+|+.+|++++||||+++++++.. +. .++|||||++|+
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~--~~iv~e~~~~gs 264 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP--IYIVTEYMSKGS 264 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc--eEEEehhhcCCC
Confidence 678999999999999997778899999976442 46789999999999999999999999875 44 899999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.++++
T Consensus 265 L~~~l~ 270 (452)
T 1fmk_A 265 LLDFLK 270 (452)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 998873
No 206
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.10 E-value=5.5e-11 Score=123.52 Aligned_cols=83 Identities=20% Similarity=0.259 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++..++||||++++++|.+.+. .|+|||||
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~--~~lV~Ey~ 156 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN--LYLVMDYY 156 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE--EEEEEecC
Confidence 67899999999999998 4688999999964322 123348899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.++|
T Consensus 157 ~gg~L~~~l 165 (437)
T 4aw2_A 157 VGGDLLTLL 165 (437)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999876
No 207
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.10 E-value=2.2e-10 Score=116.26 Aligned_cols=83 Identities=20% Similarity=0.324 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~--~~lv~e~~~ 111 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF--HYLVFDLVT 111 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEecCC
Confidence 67899999999999997 579999999996532 2345678999999999999999999999998776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 112 gg~L~~~l 119 (362)
T 2bdw_A 112 GGELFEDI 119 (362)
T ss_dssp SCBHHHHH
T ss_pred CCCHHHHH
Confidence 99998775
No 208
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.09 E-value=1.6e-10 Score=118.81 Aligned_cols=86 Identities=19% Similarity=0.306 Sum_probs=73.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++...+....++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 67999999999999998 5699999999975432 346778899999999999999999999987653338999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.+++.
T Consensus 94 g~L~~~l~ 101 (396)
T 4eut_A 94 GSLYTVLE 101 (396)
T ss_dssp EEHHHHTT
T ss_pred CCHHHHHH
Confidence 99998763
No 209
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.09 E-value=1.2e-10 Score=124.41 Aligned_cols=82 Identities=22% Similarity=0.356 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|++.++..||||.++.... ..++|.+|+.+|++++||||++++++|.. +. .++|||||++|+
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~--~~lv~e~~~~gs 347 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP--IYIVTEYMSKGS 347 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEECCCTTEE
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-cc--ceEeeehhcCCc
Confidence 678999999999999997778899999976442 46789999999999999999999999875 44 899999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.++|+
T Consensus 348 L~~~l~ 353 (535)
T 2h8h_A 348 LLDFLK 353 (535)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 998874
No 210
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.09 E-value=2.3e-10 Score=114.27 Aligned_cols=80 Identities=23% Similarity=0.338 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
++.||+|+||.||+|+. .+|+.||||.+... ....+.+|+.++..+. ||||+++++++.+... .++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~--~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLH--TFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCE--EEEEEEccCC
Confidence 57899999999999998 57899999998643 3467889999999997 9999999999998776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 91 ~~L~~~l 97 (325)
T 3kn6_A 91 GELFERI 97 (325)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998875
No 211
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.09 E-value=5.7e-11 Score=122.44 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+++.||+|++..... ...+.+.+|+.++..++|||||++++++.+.+. .|+|||||
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~--~~lV~E~~ 151 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY--LYMVMEYM 151 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE--EEEEEeCC
Confidence 67899999999999998 5789999999864211 123458899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 152 ~gg~L~~~l 160 (410)
T 3v8s_A 152 PGGDLVNLM 160 (410)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998876
No 212
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.09 E-value=1.4e-10 Score=116.46 Aligned_cols=83 Identities=23% Similarity=0.330 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+.. +++.||||.++... ....+.|.+|+.++.+++||||++++++|...+. .++||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~ 129 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP--MCLLF 129 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc--eEEEE
Confidence 678999999999999973 34789999997543 3346789999999999999999999999988777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 130 e~~~~~~L~~~l 141 (343)
T 1luf_A 130 EYMAYGDLNEFL 141 (343)
T ss_dssp ECCTTCBHHHHH
T ss_pred ecCCCCcHHHHH
Confidence 999999999876
No 213
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.09 E-value=2.3e-10 Score=114.35 Aligned_cols=85 Identities=22% Similarity=0.421 Sum_probs=74.4
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++ .+++.||||++........+.+.+|+.++++++||||+++++++...+....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 67999999999999984 4688999999987666667789999999999999999999999875444458999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 108 ~~~~~L~~~l 117 (327)
T 3lxl_A 108 LPSGCLRDFL 117 (327)
T ss_dssp CTTCBHHHHH
T ss_pred cCCCCHHHHH
Confidence 9999999876
No 214
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.08 E-value=1.6e-10 Score=118.47 Aligned_cols=83 Identities=22% Similarity=0.294 Sum_probs=73.2
Q ss_pred CCeeecC--CceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRS--SHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G--~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+| +||.||+|+. .+|+.||||++.... ....+.+.+|+.+++.++|||||++++++...+. .++||||
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~ 107 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE--LWVVTSF 107 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEEC
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE--EEEEEEc
Confidence 7799999 9999999998 579999999996532 2335678899999999999999999999998776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
|++|+|.+++
T Consensus 108 ~~~~~L~~~l 117 (389)
T 3gni_B 108 MAYGSAKDLI 117 (389)
T ss_dssp CTTCBHHHHH
T ss_pred cCCCCHHHHH
Confidence 9999998876
No 215
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.08 E-value=1.6e-10 Score=115.62 Aligned_cols=83 Identities=22% Similarity=0.438 Sum_probs=66.7
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+++. .+|+.||+|.++... ......+.+|+.+++.++||||+++++++...+. .++|
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv 99 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK--LYLI 99 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC--EEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE--EEEE
Confidence 67999999999999986 478999999997542 2234568899999999999999999999998777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 100 ~e~~~~~~L~~~l 112 (327)
T 3a62_A 100 LEYLSGGELFMQL 112 (327)
T ss_dssp EECCTTEEHHHHH
T ss_pred EeCCCCCcHHHHH
Confidence 9999999998875
No 216
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.08 E-value=2.9e-10 Score=112.28 Aligned_cols=83 Identities=19% Similarity=0.364 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+++. .+|+.||||.+........+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 91 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTH--YYLVMQLVSGG 91 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCCSC
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCE--EEEEEEcCCCc
Confidence 67899999999999997 5799999999976544455779999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 92 ~L~~~l 97 (304)
T 2jam_A 92 ELFDRI 97 (304)
T ss_dssp BHHHHH
T ss_pred cHHHHH
Confidence 998765
No 217
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.08 E-value=1.5e-10 Score=114.00 Aligned_cols=83 Identities=19% Similarity=0.402 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|..+|+|.+........+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 101 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGK--LWIMIEFCPGG 101 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-C--EEEEEECCTTE
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCe--EEEEEEeCCCC
Confidence 67899999999999998 5689999999976655567889999999999999999999999998777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~l~~~~ 107 (302)
T 2j7t_A 102 AVDAIM 107 (302)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 998764
No 218
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.08 E-value=3.3e-10 Score=110.76 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+++. .++..+|+|.+.... ....+.+.+|+.++++++||||+++++++..... .++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~ 104 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN--MYIVMETCEG 104 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCCSC
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCe--EEEEEEeCCC
Confidence 67999999999999997 578999999986543 2346789999999999999999999999987766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 105 ~~L~~~l 111 (285)
T 3is5_A 105 GELLERI 111 (285)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998765
No 219
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.08 E-value=2.4e-10 Score=115.19 Aligned_cols=83 Identities=19% Similarity=0.354 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+++. .+|+.||||.+.... ....+.+.+|+.++.++ +||||+++++++.+.+. .++||||
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~--~~lv~e~ 91 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--LFFVIEY 91 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEECC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE--EEEEEeC
Confidence 67899999999999998 578999999996532 23356688999999987 89999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 92 ~~gg~L~~~l 101 (345)
T 3a8x_A 92 VNGGDLMFHM 101 (345)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998775
No 220
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.07 E-value=1.5e-10 Score=117.35 Aligned_cols=82 Identities=21% Similarity=0.380 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+++. .+++.||||.+..... ..+.+.+|+.+++.++||||+++++++...+. .++||||+++|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~~~ 101 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTH--LAIIMEYASGG 101 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEEECCCSC
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCE--EEEEEEeCCCC
Confidence 67899999999999997 5899999999965433 34678899999999999999999999998776 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 102 ~L~~~l 107 (361)
T 3uc3_A 102 ELYERI 107 (361)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998875
No 221
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.07 E-value=1.3e-10 Score=117.39 Aligned_cols=81 Identities=23% Similarity=0.397 Sum_probs=65.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ..+.+.+|+.++.+++||||+++++++...+. .++||||+++|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~~~~~ 133 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTE--ISLVLELVTGG 133 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCCSC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCe--EEEEEEeCCCC
Confidence 67899999999999998 468899999997543 34678899999999999999999999988766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 134 ~L~~~l 139 (349)
T 2w4o_A 134 ELFDRI 139 (349)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998876
No 222
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.07 E-value=1.5e-10 Score=118.26 Aligned_cols=83 Identities=20% Similarity=0.394 Sum_probs=72.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+++. .+++.||+|.+.... ....+.+.+|+.++..++|||||++++++.+.+. .++||||+
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~--~~lv~e~~ 97 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED--MFMVVDLL 97 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEEecC
Confidence 67999999999999997 578999999986432 2235778999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 98 ~gg~L~~~l 106 (384)
T 4fr4_A 98 LGGDLRYHL 106 (384)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
No 223
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.06 E-value=1.4e-10 Score=115.68 Aligned_cols=83 Identities=23% Similarity=0.250 Sum_probs=69.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC--ceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE--QERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|++ .++.||||++..... ....+..|+.++++++||||+++++++..... ...++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEE-CCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 77999999999999998 488999999965432 34556779999999999999999999976432 236999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 107 g~L~~~l 113 (322)
T 3soc_A 107 GSLSDFL 113 (322)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
No 224
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.06 E-value=3.7e-10 Score=109.08 Aligned_cols=82 Identities=17% Similarity=0.306 Sum_probs=73.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|+..++..||+|.+..... ..+.+.+|+.++.+++||||+++++++...+. .++||||+++|+
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~~ 89 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP--ICLVTEFMEHGC 89 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--CEEEECCCTTCB
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC--eEEEEeCCCCCc
Confidence 678999999999999987888999999976433 35789999999999999999999999988776 999999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 90 L~~~~ 94 (267)
T 3t9t_A 90 LSDYL 94 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
No 225
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.06 E-value=1.7e-10 Score=113.57 Aligned_cols=85 Identities=16% Similarity=0.229 Sum_probs=67.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh--------------------------cHHHHHHHHHHHHcCCCCc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR--------------------------HKKEFAKEVKKIGSMRHPN 522 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~--------------------------~~~~~~~ei~~l~~l~H~n 522 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 67899999999999997 57899999998543211 1356899999999999999
Q ss_pred ceeeeEEEEcCCCceEEEEEeccCCCChhhhh
Q 048796 523 IVPLRAYYWGPREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 523 iv~l~g~~~~~~~~~~~lv~e~~~~GsL~~~l 554 (555)
|+++++++........++||||+++|+|.+++
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 129 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSS
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh
Confidence 99999999864333489999999999987653
No 226
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.06 E-value=2.5e-10 Score=113.11 Aligned_cols=83 Identities=23% Similarity=0.318 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~ 105 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP--LLLIV 105 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc--eEEEE
Confidence 67899999999999985 245789999997543 3345789999999999999999999999987777 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 106 e~~~~~~L~~~l 117 (314)
T 2ivs_A 106 EYAKYGSLRGFL 117 (314)
T ss_dssp ECCTTCBHHHHH
T ss_pred eecCCCCHHHHH
Confidence 999999999876
No 227
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.06 E-value=2e-10 Score=116.87 Aligned_cols=83 Identities=24% Similarity=0.301 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++ .++..||||++... .......+.+|+.++.+++||||+++++++..... .++||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~--~~lv~ 153 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--RFILL 153 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC--CEEEE
Confidence 67899999999999995 24678999999654 33446679999999999999999999999988777 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 154 e~~~~g~L~~~l 165 (367)
T 3l9p_A 154 ELMAGGDLKSFL 165 (367)
T ss_dssp ECCTTEEHHHHH
T ss_pred EeCCCCCHHHHH
Confidence 999999999876
No 228
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.05 E-value=2e-10 Score=116.07 Aligned_cols=83 Identities=22% Similarity=0.432 Sum_probs=71.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||.++... ....+.+.+|..++..+ +||||+++++++...+. .|+||||
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~--~~lv~E~ 105 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR--LFFVMEF 105 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE--EEEEEeC
Confidence 67899999999999997 578999999996532 22356688999999988 79999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 106 ~~gg~L~~~l 115 (353)
T 3txo_A 106 VNGGDLMFHI 115 (353)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998875
No 229
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.05 E-value=4.6e-10 Score=110.18 Aligned_cols=83 Identities=12% Similarity=0.215 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.+|+|.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~ 97 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELC 97 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCE--EEEEEecC
Confidence 67999999999999998 56889999998543 22345778999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 98 ~~~~L~~~~ 106 (294)
T 2rku_A 98 RRRSLLELH 106 (294)
T ss_dssp TTCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998764
No 230
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.05 E-value=1.4e-10 Score=119.66 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+++. .+|+.||||+++.... ...+.+.+|+.++..++||||+++++++.+.+. .|+|||||
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~--~~lVmE~~ 143 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY--LYLVMEYY 143 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE--EEEEEcCC
Confidence 67899999999999998 5799999999964321 123458899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 144 ~gg~L~~~l 152 (412)
T 2vd5_A 144 VGGDLLTLL 152 (412)
T ss_dssp CSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999886
No 231
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.05 E-value=5.3e-10 Score=111.33 Aligned_cols=83 Identities=20% Similarity=0.342 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++..++||||+++++++...+. .++||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ 94 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD--VVLIL 94 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE--EEEEE
Confidence 67899999999999997 5799999999864322 136789999999999999999999999987766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 95 e~~~~~~L~~~l 106 (321)
T 2a2a_A 95 ELVSGGELFDFL 106 (321)
T ss_dssp CCCCSCBHHHHH
T ss_pred EcCCCCcHHHHH
Confidence 999999999876
No 232
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.04 E-value=6.4e-10 Score=110.61 Aligned_cols=85 Identities=20% Similarity=0.314 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||++.+ .+|+.||||++.... ....+.|.+|+.++++++||||+++++++...+....++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 67899999999999875 268899999997543 344677999999999999999999999998754334899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 116 ~~~~~~L~~~l 126 (318)
T 3lxp_A 116 YVPLGSLRDYL 126 (318)
T ss_dssp CCTTCBHHHHG
T ss_pred cccCCcHHHHH
Confidence 99999999876
No 233
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.04 E-value=6.7e-10 Score=108.25 Aligned_cols=83 Identities=23% Similarity=0.430 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+++. .+|+.||||.+..... ...+.|.+|+.++.+++||||+++++++...+. .++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~ 87 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD--VVLIL 87 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEE
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe--EEEEE
Confidence 67899999999999998 4799999999854321 136789999999999999999999999987766 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 88 e~~~~~~L~~~l 99 (283)
T 3bhy_A 88 ELVSGGELFDFL 99 (283)
T ss_dssp ECCCSCBHHHHH
T ss_pred eecCCCcHHHHH
Confidence 999999998875
No 234
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.04 E-value=3.4e-10 Score=112.63 Aligned_cols=82 Identities=20% Similarity=0.307 Sum_probs=62.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~- 86 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENK--LTLVFEFMD- 86 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTE--EEEEEECCC-
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCe--EEEEEEecC-
Confidence 77899999999999997 5799999999965432 235778999999999999999999999987766 999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~~L~~~l 93 (317)
T 2pmi_A 87 NDLKKYM 93 (317)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 5888765
No 235
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.04 E-value=1.6e-10 Score=116.60 Aligned_cols=163 Identities=14% Similarity=0.225 Sum_probs=98.0
Q ss_pred ccccCCCCccEEEeeCCc-CCCCCchhccCCCCccEEEcCCCcCCCCCchhhh--CCCCCCeEEccC--CcccccCCcCc
Q 048796 71 NLTSQFDRLSTFNIRNNS-VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFF--SSMALTNLNLSG--NGFSGAIPLRS 145 (555)
Q Consensus 71 ~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~--~~~~L~~L~Ls~--N~l~~~~p~~~ 145 (555)
..+..+++|+.|+|++|. +. ++. +. +++|+.|+|..|.+.......+. .+++|+.|+|+. |...+.. .+
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~~ 239 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--DM 239 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--CG
T ss_pred HHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--hH
Confidence 445566777778777763 22 222 32 67788888877776533333343 577888887753 2221110 01
Q ss_pred cccccccccCCCCCcCEEEccCCcCCCcCCcccc---CccccceeecccccccCCCc----hhccCCCCCCEEeCCCCcC
Q 048796 146 SHASELLVLPSYPPMESLDLSGNALTGVLPSDIG---NMGRLRLLNLANNHLSGKMP----SELSKLGALEYLDLSGNQF 218 (555)
Q Consensus 146 ~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l 218 (555)
..+..+.....+++|++|+|.+|.+++..+..+. .+++|+.|+|+.|.|++..+ ..+..+++|+.|+|++|.|
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 1111111112358899999999888754333332 57889999999999876432 2334568899999999988
Q ss_pred CCCCChhhhc-CCCEEEeccCC
Q 048796 219 KGEIPDKLSL-KLNEFNVSYND 239 (555)
Q Consensus 219 ~~~~p~~~~~-~L~~L~ls~N~ 239 (555)
+...-..+.. -...++++.|+
T Consensus 320 ~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 320 SDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp CHHHHHHHHHHCCSEEECCSBC
T ss_pred CHHHHHHHHHHcCCEEEecCCc
Confidence 8544444442 23667888776
No 236
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.04 E-value=2.9e-10 Score=112.84 Aligned_cols=85 Identities=21% Similarity=0.298 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+++. .+|+.||||.+........+.+.+|+.+++.++||||+++++++... .....++|+||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 77999999999999997 68999999998766556678899999999999999999999998631 2224899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 114 ~~~L~~~l 121 (317)
T 2buj_A 114 RGTLWNEI 121 (317)
T ss_dssp TCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998875
No 237
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.04 E-value=2.2e-10 Score=110.91 Aligned_cols=82 Identities=26% Similarity=0.412 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh----hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV----RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .|..+|||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 12 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 88 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN--LCLVMEFA 88 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEECC
T ss_pred eeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc--eEEEEEcC
Confidence 67999999999999998 588999999864322 235779999999999999999999999988776 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 89 ~~~~L~~~~ 97 (271)
T 3dtc_A 89 RGGPLNRVL 97 (271)
T ss_dssp TTEEHHHHH
T ss_pred CCCCHHHHh
Confidence 999998875
No 238
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.04 E-value=1.6e-10 Score=116.97 Aligned_cols=84 Identities=21% Similarity=0.339 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|++ .+++.||||+++.... ...+.|.+|+.++.++ +||||++++++|...+. ..++|
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~-~~~iv 105 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVI 105 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-CCEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC-ceEEE
Confidence 67899999999999983 3568899999976433 3356799999999999 79999999999976442 38999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 106 ~e~~~~g~L~~~l 118 (359)
T 3vhe_A 106 VEFCKFGNLSTYL 118 (359)
T ss_dssp EECCTTEEHHHHH
T ss_pred EEecCCCcHHHHH
Confidence 9999999999886
No 239
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.04 E-value=2.7e-10 Score=115.03 Aligned_cols=83 Identities=19% Similarity=0.336 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+|+.||||.+.... ....+.+.+|+.++..++||||+++++++.+.+. .++||||+
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 123 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN--LYMVMEYV 123 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE--EEEEEcCC
Confidence 67899999999999997 579999999986432 1235678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 124 ~gg~L~~~l 132 (350)
T 1rdq_E 124 AGGEMFSHL 132 (350)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998876
No 240
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.04 E-value=3.2e-10 Score=110.30 Aligned_cols=85 Identities=25% Similarity=0.336 Sum_probs=72.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+++. .+|+.||+|.+.... ....+.+.+|+.++++++||||+++++++........++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 67899999999999997 579999999996532 334677999999999999999999999886433334899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 91 ~~~L~~~l 98 (279)
T 2w5a_A 91 GGDLASVI 98 (279)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99998876
No 241
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.03 E-value=5.9e-10 Score=108.69 Aligned_cols=83 Identities=20% Similarity=0.318 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||||.+.... .....++.+|+..+..+ +||||+++++++...+. .++||||+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~--~~lv~e~~ 93 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH--MLIQNEYC 93 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe--EEEEEEec
Confidence 67899999999999998 579999999986532 23467789999999998 99999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~~~~L~~~l 102 (289)
T 1x8b_A 94 NGGSLADAI 102 (289)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999876
No 242
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.03 E-value=3.8e-10 Score=117.56 Aligned_cols=83 Identities=19% Similarity=0.311 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+|+.+|+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+. .++||||++
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--~~lv~E~~~ 93 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGH--HYLIFDLVT 93 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE--EEEEECCCB
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE--EEEEEEeCC
Confidence 67899999999999987 679999999996543 2345679999999999999999999999988776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+.+
T Consensus 94 gg~L~~~i 101 (444)
T 3soa_A 94 GGELFEDI 101 (444)
T ss_dssp CCBHHHHH
T ss_pred CCCHHHHH
Confidence 99998765
No 243
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.03 E-value=2.1e-10 Score=115.49 Aligned_cols=83 Identities=17% Similarity=0.372 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||.++... ....+.+..|..++..+ +||||+++++++.+.+. .|+||||
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~--~~lv~E~ 99 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN--LFFVMEY 99 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE--EEEEEeC
Confidence 67999999999999998 578999999996532 22356678899988876 99999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 100 ~~gg~L~~~l 109 (345)
T 1xjd_A 100 LNGGDLMYHI 109 (345)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998876
No 244
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.03 E-value=5.3e-10 Score=111.61 Aligned_cols=85 Identities=24% Similarity=0.432 Sum_probs=72.1
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++ .+|+.||||.+........+.|.+|+.++++++||||+++++++...+....++|+||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 67899999999999984 4688999999987655567789999999999999999999999876543238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 126 ~~~~~L~~~l 135 (326)
T 2w1i_A 126 LPYGSLRDYL 135 (326)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
No 245
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.03 E-value=4.3e-10 Score=113.93 Aligned_cols=83 Identities=19% Similarity=0.352 Sum_probs=73.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+++. .+|..||+|.+.... ....+.+.+|+.++..++||||+++++++...+. .++||||+++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 115 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE--ISICMEHMDG 115 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTE--EEEEECCCTT
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCE--EEEEEECCCC
Confidence 67899999999999998 579999999997543 3345789999999999999999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 116 ~~L~~~l 122 (360)
T 3eqc_A 116 GSLDQVL 122 (360)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
No 246
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.02 E-value=2.8e-10 Score=112.68 Aligned_cols=78 Identities=29% Similarity=0.466 Sum_probs=68.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|++ .++.||||.+.... ..+.|.+|+.++++++||||+++++++. +. .++||||+++|+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~--~~lv~e~~~~~~ 85 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NP--VCLVMEYAEGGS 85 (307)
T ss_dssp EEEEECCSSSEEEEEEE-TTEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TT--TEEEEECCTTCB
T ss_pred eeEeecCCCceEEEEEE-CCeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CC--cEEEEEcCCCCC
Confidence 67899999999999998 57889999986532 3578999999999999999999999876 34 799999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 86 L~~~l 90 (307)
T 2eva_A 86 LYNVL 90 (307)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
No 247
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.02 E-value=3.3e-10 Score=110.32 Aligned_cols=83 Identities=25% Similarity=0.413 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.++++++||||+++++++...+. .++||||+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 91 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR--VYLILEYA 91 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCE--EEEEEecC
Confidence 67899999999999997 568899999985432 1235678999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 92 ~~~~l~~~l 100 (279)
T 3fdn_A 92 PLGTVYREL 100 (279)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998765
No 248
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.02 E-value=7.6e-10 Score=108.98 Aligned_cols=85 Identities=21% Similarity=0.296 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe-----CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-----DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|++ .+++.||||.+..... ...+.+.+|+.++..++||||+++++++...+....++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 67899999999999984 4688999999975432 34578999999999999999999999998763333899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 106 ~~~~~~L~~~l 116 (302)
T 4e5w_A 106 FLPSGSLKEYL 116 (302)
T ss_dssp CCTTCBHHHHH
T ss_pred eCCCCcHHHHH
Confidence 99999999876
No 249
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.02 E-value=2.7e-10 Score=116.77 Aligned_cols=83 Identities=19% Similarity=0.377 Sum_probs=69.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+++. .+++.||||+++.... ...+.+..|..++.++ +||||+++++++.+.+. .++||||
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~--~~lV~E~ 134 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR--LFFVIEY 134 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE--EEEEEEc
Confidence 67999999999999997 5788999999965322 2234578899998876 89999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 135 ~~gg~L~~~l 144 (396)
T 4dc2_A 135 VNGGDLMFHM 144 (396)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998775
No 250
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.02 E-value=6.2e-10 Score=111.61 Aligned_cols=83 Identities=12% Similarity=0.215 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++. .+++.+|+|.+... .....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~ 123 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF--VFVVLELC 123 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCe--EEEEEecC
Confidence 67899999999999997 56889999998643 22346779999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 124 ~~~~L~~~~ 132 (335)
T 2owb_A 124 RRRSLLELH 132 (335)
T ss_dssp TTCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998765
No 251
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.02 E-value=5.2e-10 Score=109.09 Aligned_cols=83 Identities=20% Similarity=0.324 Sum_probs=71.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||+|.+... .....+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~ 88 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESF--HYLVFDLVT 88 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCE--EEEEEecCC
Confidence 67899999999999997 57899999998643 22345778999999999999999999999987766 899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 89 ~~~l~~~~ 96 (284)
T 3kk8_A 89 GGELFEDI 96 (284)
T ss_dssp SCBHHHHH
T ss_pred CCCHHHHH
Confidence 99997764
No 252
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.02 E-value=5.4e-10 Score=121.35 Aligned_cols=80 Identities=20% Similarity=0.303 Sum_probs=69.7
Q ss_pred eeecCCceEEEEEEeC---CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 472 VLGRSSHGTLYKATLD---SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.||+|+||.||+|.+. ++..||||.++.... ...++|.+|+.+|++++|||||+++++|.. +. .++|||||++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~--~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA--LMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SS--EEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CC--eEEEEEeCCC
Confidence 6999999999999872 566799999976433 356889999999999999999999999975 45 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 420 g~L~~~l 426 (613)
T 2ozo_A 420 GPLHKFL 426 (613)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9999886
No 253
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.02 E-value=8.1e-10 Score=109.32 Aligned_cols=83 Identities=17% Similarity=0.325 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+... .....+.+.+|+.++.+++||||+++++++...+. .++||||+
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 114 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE--LNIVLELA 114 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCc--EEEEEecC
Confidence 67899999999999997 67999999999653 23345779999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 115 ~~~~L~~~l 123 (310)
T 2wqm_A 115 DAGDLSRMI 123 (310)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998875
No 254
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.02 E-value=7.4e-10 Score=107.76 Aligned_cols=82 Identities=22% Similarity=0.329 Sum_probs=71.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+|...++..||||.+.... ...+.|.+|+.++..++||||+++++++.. +. .++||||+++|+
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~~~v~e~~~~~~ 93 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP--IYIITEYMENGS 93 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEEECCTTCB
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CC--cEEEEecCCCCC
Confidence 67899999999999998778899999996543 246789999999999999999999999864 44 899999999999
Q ss_pred hhhhhC
Q 048796 550 LALHLY 555 (555)
Q Consensus 550 L~~~l~ 555 (555)
|.+++.
T Consensus 94 L~~~l~ 99 (279)
T 1qpc_A 94 LVDFLK 99 (279)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 998763
No 255
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.02 E-value=3.8e-10 Score=111.93 Aligned_cols=82 Identities=24% Similarity=0.391 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~~~ 103 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC--LTLVFEFMEK 103 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSC--EEEEEECCSE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCE--EEEEEcCCCC
Confidence 678999999999999998899999999965322 225678999999999999999999999987777 9999999985
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 104 -~l~~~~ 109 (311)
T 3niz_A 104 -DLKKVL 109 (311)
T ss_dssp -EHHHHH
T ss_pred -CHHHHH
Confidence 676654
No 256
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.02 E-value=5.4e-10 Score=118.34 Aligned_cols=83 Identities=19% Similarity=0.285 Sum_probs=68.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .++..+|||.+.... ......+.+|+.+++.++||||++++++|..... .++||||++
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~ 119 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRN--YYLVMECYK 119 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECCC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEecCC
Confidence 67899999999999997 578999999986542 2235779999999999999999999999998766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 120 ~g~L~~~~ 127 (494)
T 3lij_A 120 GGELFDEI 127 (494)
T ss_dssp SCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998765
No 257
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.01 E-value=3.6e-10 Score=111.91 Aligned_cols=83 Identities=24% Similarity=0.304 Sum_probs=72.3
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++++...+. .++|
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--~~lv 105 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP--TLVI 105 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC--cEEE
Confidence 67899999999999984 3567899999975433 3467899999999999 99999999999988777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 106 ~e~~~~~~L~~~l 118 (313)
T 1t46_A 106 TEYCCYGDLLNFL 118 (313)
T ss_dssp EECCTTEEHHHHH
T ss_pred EecCCCCCHHHHH
Confidence 9999999999876
No 258
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.01 E-value=2.6e-10 Score=111.53 Aligned_cols=82 Identities=22% Similarity=0.327 Sum_probs=72.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .++..||||.+..... ..+.+.+|+.++++++||||+++++++...+. .++||||+++|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~~v~e~~~~~ 94 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP--FYIITEFMTYG 94 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--EEEEEECCTTE
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC--EEEEEEcCCCC
Confidence 67899999999999998 4688999999975432 45789999999999999999999999987777 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 95 ~L~~~~ 100 (288)
T 3kfa_A 95 NLLDYL 100 (288)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 998876
No 259
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.01 E-value=7.4e-10 Score=117.60 Aligned_cols=83 Identities=18% Similarity=0.325 Sum_probs=69.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-------------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-------------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-------------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~ 535 (555)
.+.||+|+||.||+|+. .++..+|||.+..... ...+.+.+|+.++++++||||++++++|.....
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 67899999999999997 5788999999864321 235679999999999999999999999998776
Q ss_pred ceEEEEEeccCCCChhhhh
Q 048796 536 QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l 554 (555)
.++|||||++|+|.+++
T Consensus 121 --~~lv~e~~~gg~L~~~l 137 (504)
T 3q5i_A 121 --FYLVTEFYEGGELFEQI 137 (504)
T ss_dssp --EEEEEECCTTCBHHHHH
T ss_pred --EEEEEecCCCCcHHHHH
Confidence 99999999999998765
No 260
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.01 E-value=3.9e-10 Score=113.00 Aligned_cols=83 Identities=18% Similarity=0.266 Sum_probs=70.6
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.++.++ +||||++++++|...+. .+
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~ 117 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP--LY 117 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC--CE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCc--eE
Confidence 67899999999999986 246789999997543 33457799999999999 89999999999987776 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 118 lv~e~~~~~~L~~~l 132 (334)
T 2pvf_A 118 VIVEYASKGNLREYL 132 (334)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEECCCCCcHHHHH
Confidence 999999999999876
No 261
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.01 E-value=5.3e-10 Score=110.27 Aligned_cols=83 Identities=16% Similarity=0.314 Sum_probs=73.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 104 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK--LWIIMEYLGG 104 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCTT
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCe--EEEEEEeCCC
Confidence 67899999999999987 578999999996543 2346789999999999999999999999987766 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 105 ~~L~~~~ 111 (303)
T 3a7i_A 105 GSALDLL 111 (303)
T ss_dssp EEHHHHH
T ss_pred CcHHHHH
Confidence 9998876
No 262
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.01 E-value=1.6e-10 Score=114.60 Aligned_cols=85 Identities=21% Similarity=0.273 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc--eEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ--ERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~--~~~lv~e 543 (555)
.+.||+|+||.||+++. .+++.||||.+..... ...+.|.+|+.++.+++||||+++++++...... ..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 67899999999999997 6789999999975432 2346789999999999999999999998754431 1499999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 97 ~~~g~~L~~~l 107 (311)
T 3ork_A 97 YVDGVTLRDIV 107 (311)
T ss_dssp CCCEEEHHHHH
T ss_pred cCCCCCHHHHH
Confidence 99999999876
No 263
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.00 E-value=4.9e-10 Score=111.50 Aligned_cols=83 Identities=18% Similarity=0.279 Sum_probs=71.8
Q ss_pred CCeeecCCceEEEEEEeC------CCCEEEEEEeccCCh-hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD------SGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+.. +++.||||.+..... .....|.+|+.+++.++||||+++++++...+. .++||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~ 107 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP--TLVIM 107 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc--cEEEE
Confidence 678999999999999863 367899999975432 345679999999999999999999999987776 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 108 e~~~~~~L~~~l 119 (322)
T 1p4o_A 108 ELMTRGDLKSYL 119 (322)
T ss_dssp ECCTTCBHHHHH
T ss_pred EeCCCCcHHHHH
Confidence 999999999876
No 264
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.00 E-value=7.6e-10 Score=107.42 Aligned_cols=83 Identities=19% Similarity=0.229 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++|+||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 89 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNI--QYLFLEYCSG 89 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCTT
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCE--EEEEEEecCC
Confidence 67899999999999997 579999999986432 2345789999999999999999999999987766 8999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 90 ~~L~~~l 96 (276)
T 2yex_A 90 GELFDRI 96 (276)
T ss_dssp EEGGGGS
T ss_pred CcHHHHH
Confidence 9998876
No 265
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.00 E-value=3.7e-10 Score=109.89 Aligned_cols=83 Identities=20% Similarity=0.354 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++|+||+
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 93 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY--VYLVLEMC 93 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCe--EEEEEecC
Confidence 67899999999999997 6799999999864321 224779999999999999999999999988766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~~~~L~~~l 102 (278)
T 3cok_A 94 HNGEMNRYL 102 (278)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
No 266
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.00 E-value=5.7e-10 Score=119.14 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+.... ......+.+|+.++..++|||||++++++.+.+. .++|||||
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~--l~lVmEy~ 266 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA--LCLVLTLM 266 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCE--EEEEEEcC
Confidence 57899999999999997 579999999996432 2235678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 267 ~gg~L~~~l 275 (576)
T 2acx_A 267 NGGDLKFHI 275 (576)
T ss_dssp CSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998876
No 267
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.00 E-value=4.5e-10 Score=112.93 Aligned_cols=83 Identities=24% Similarity=0.267 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.++.++ +||||+++++++...+. .++|
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~lv 127 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP--IYLI 127 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc--cEEE
Confidence 67999999999999985 245689999997542 23457899999999999 89999999999988777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 128 ~e~~~~g~L~~~l 140 (344)
T 1rjb_A 128 FEYCCYGDLLNYL 140 (344)
T ss_dssp EECCTTCBHHHHH
T ss_pred EecCCCCcHHHHH
Confidence 9999999999876
No 268
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.00 E-value=6.2e-10 Score=108.10 Aligned_cols=83 Identities=22% Similarity=0.389 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 93 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD--FFMVMEYV 93 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe--EEEEEecc
Confidence 67899999999999998 479999999986432 1235678999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 94 ~~~~L~~~l 102 (276)
T 2h6d_A 94 SGGELFDYI 102 (276)
T ss_dssp CSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
No 269
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=98.99 E-value=5.5e-10 Score=109.38 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 84 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR--LVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC--EEEEEECCSE
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCe--EEEEEEecCC
Confidence 568999999999999987899999999965432 234778999999999999999999999998777 9999999986
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 85 -~l~~~~ 90 (288)
T 1ob3_A 85 -DLKKLL 90 (288)
T ss_dssp -EHHHHH
T ss_pred -CHHHHH
Confidence 777654
No 270
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=98.99 E-value=4.7e-10 Score=117.78 Aligned_cols=83 Identities=22% Similarity=0.399 Sum_probs=72.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~--~~lv~E~~ 98 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD--IFMVMEYV 98 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE--EEEEEeCC
Confidence 67899999999999997 5899999999964322 235678999999999999999999999988766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 99 ~gg~L~~~l 107 (476)
T 2y94_A 99 SGGELFDYI 107 (476)
T ss_dssp SSEEHHHHT
T ss_pred CCCcHHHHH
Confidence 999999876
No 271
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=98.99 E-value=6.9e-10 Score=113.43 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe--------CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--------DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. ..+..||||++.... ....+.+.+|+.++.++ +||||++++++|...+. .+
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~--~~ 151 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP--LY 151 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCc--eE
Confidence 67899999999999985 123579999996543 33457899999999999 99999999999988777 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 152 lv~e~~~~g~L~~~l 166 (382)
T 3tt0_A 152 VIVEYASKGNLREYL 166 (382)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEEecCCCcHHHHH
Confidence 999999999999876
No 272
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=98.99 E-value=6.3e-10 Score=109.32 Aligned_cols=83 Identities=24% Similarity=0.284 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---------hhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---------VRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---------~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~ 538 (555)
.+.||+|+||.||+|+. .+|+.||||.++... ....+.+.+|+.++.++. ||||+++++++...+. .
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~--~ 99 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF--F 99 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE--E
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe--E
Confidence 67899999999999998 578999999986432 122467889999999996 9999999999987766 9
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++||||+++|+|.+++
T Consensus 100 ~lv~e~~~~~~L~~~l 115 (298)
T 1phk_A 100 FLVFDLMKKGELFDYL 115 (298)
T ss_dssp EEEEECCTTCBHHHHH
T ss_pred EEEEeccCCCcHHHHH
Confidence 9999999999999876
No 273
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=98.99 E-value=9.1e-10 Score=107.82 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|+.+++.++||||+++++++... +....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 56899999999999997 67889999998643 233467799999999999999999999998642 22238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 111 ~~~~~L~~~l 120 (290)
T 1t4h_A 111 MTSGTLKTYL 120 (290)
T ss_dssp CCSCBHHHHH
T ss_pred cCCCCHHHHH
Confidence 9999998876
No 274
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.99 E-value=5.8e-10 Score=109.79 Aligned_cols=81 Identities=22% Similarity=0.342 Sum_probs=65.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcCCC--ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGPRE--QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~~~--~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. +|+.||||.+... ....+.+|.+++.. ++||||+++++++..... ...++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 78999999999999988 5899999998643 34667788888887 799999999999876551 1389999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 84 ~~g~L~~~l 92 (303)
T 3gxj_A 84 EHGSLFDYL 92 (303)
T ss_dssp TTCCHHHHH
T ss_pred CCCCHHHHH
Confidence 999999876
No 275
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=98.99 E-value=5.7e-10 Score=110.43 Aligned_cols=83 Identities=23% Similarity=0.329 Sum_probs=71.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++.+++||||+++++++...+. .++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 85 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR--LHLVFEYCD 85 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCe--EEEEEEeCC
Confidence 57899999999999998 5699999999855332 235678899999999999999999999988776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 86 ~~~l~~~~ 93 (311)
T 4agu_A 86 HTVLHELD 93 (311)
T ss_dssp EEHHHHHH
T ss_pred CchHHHHH
Confidence 99887654
No 276
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=98.99 E-value=7.4e-10 Score=120.65 Aligned_cols=81 Identities=21% Similarity=0.236 Sum_probs=69.3
Q ss_pred CeeecCCceEEEEEEe---CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 471 EVLGRSSHGTLYKATL---DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
+.||+|+||.||+|.+ ..++.||||+++.... ...++|.+|+.+|.+++|||||+++++|.. +. .++|||||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~--~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ES--WMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS--EEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CC--EEEEEEcc
Confidence 4799999999999976 3567899999975432 336789999999999999999999999974 44 89999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 452 ~~g~L~~~l 460 (635)
T 4fl3_A 452 ELGPLNKYL 460 (635)
T ss_dssp TTEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999876
No 277
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.99 E-value=9.5e-10 Score=116.12 Aligned_cols=83 Identities=23% Similarity=0.330 Sum_probs=73.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++++++||||+++++++...+. .++|+||+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~ 108 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY--FYLVGEVY 108 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE--EEEEEecC
Confidence 67899999999999997 589999999985432 2346789999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 109 ~~~~L~~~~ 117 (484)
T 3nyv_A 109 TGGELFDEI 117 (484)
T ss_dssp CSCBHHHHH
T ss_pred CCCCHHHHH
Confidence 999998765
No 278
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=98.98 E-value=5.8e-10 Score=108.90 Aligned_cols=83 Identities=20% Similarity=0.398 Sum_probs=71.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 96 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR--IYLMLEFA 96 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCE--EEEEEEeC
Confidence 67899999999999997 568899999985432 1235679999999999999999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 97 ~~~~L~~~l 105 (284)
T 2vgo_A 97 PRGELYKEL 105 (284)
T ss_dssp TTEEHHHHH
T ss_pred CCCcHHHHH
Confidence 999998875
No 279
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=98.98 E-value=6.1e-10 Score=110.28 Aligned_cols=83 Identities=20% Similarity=0.363 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++|+||+
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~--~~lv~e~~ 116 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ--LYVDMRLI 116 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe--EEEEEEec
Confidence 67899999999999997 5788999999965432 224779999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 117 ~~~~L~~~l 125 (309)
T 2h34_A 117 NGVDLAAML 125 (309)
T ss_dssp CCEEHHHHH
T ss_pred CCCCHHHHH
Confidence 999999875
No 280
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=98.98 E-value=4.3e-10 Score=112.27 Aligned_cols=83 Identities=24% Similarity=0.303 Sum_probs=69.4
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++ .++..||||.+... .......+.+|+.++++++||||+++++++...+. .++||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~ 112 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--RFILM 112 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEEE
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC--cEEEE
Confidence 67899999999999984 35778999999643 33446789999999999999999999999988777 89999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 113 e~~~~~~L~~~l 124 (327)
T 2yfx_A 113 ELMAGGDLKSFL 124 (327)
T ss_dssp ECCTTEEHHHHH
T ss_pred ecCCCCcHHHHH
Confidence 999999999876
No 281
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=98.98 E-value=1.4e-09 Score=106.42 Aligned_cols=81 Identities=20% Similarity=0.292 Sum_probs=69.5
Q ss_pred CeeecCCceEEEEEEe---CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL---DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
..||+|+||.||+|++ .++..||||.++... ....+.+.+|+.++.+++||||+++++++.. +. .++||||++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~~lv~e~~~ 92 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA--LMLVMEMAG 92 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SS--EEEEEECCT
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-CC--cEEEEEeCC
Confidence 4899999999999986 367889999997643 3446789999999999999999999999953 44 899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 93 ~~~L~~~l 100 (287)
T 1u59_A 93 GGPLHKFL 100 (287)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99999876
No 282
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=98.98 E-value=2.3e-10 Score=119.52 Aligned_cols=83 Identities=19% Similarity=0.337 Sum_probs=63.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+... .......+.+|+.+++.++||||++++++|...+. .++|||||
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~--~~lv~e~~ 230 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR--LCFVMEYA 230 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE--EEEEECCC
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE--EEEEEeeC
Confidence 67999999999999997 67999999999643 22234668899999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 231 ~~~~L~~~l 239 (446)
T 4ejn_A 231 NGGELFFHL 239 (446)
T ss_dssp SSCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999998765
No 283
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=98.98 E-value=8.7e-10 Score=111.17 Aligned_cols=82 Identities=23% Similarity=0.362 Sum_probs=69.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.|.+|+.++++++||||+++++++...+. .++||||+
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~ 136 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT--AWLVMEYC 136 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCe--EEEEEecC
Confidence 56899999999999996 6899999999965332 234678999999999999999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+ |+|.+++
T Consensus 137 ~-g~l~~~l 144 (348)
T 1u5q_A 137 L-GSASDLL 144 (348)
T ss_dssp S-EEHHHHH
T ss_pred C-CCHHHHH
Confidence 8 5776654
No 284
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=98.98 E-value=3.9e-10 Score=113.11 Aligned_cols=82 Identities=23% Similarity=0.402 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~--~~lv~E~~ 91 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTD--IVMVIEYA 91 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE--EEEEEECC
Confidence 67899999999999997 6899999999864321 224678999999999999999999999998776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+|+|.+++
T Consensus 92 -~g~l~~~l 99 (336)
T 3h4j_B 92 -GGELFDYI 99 (336)
T ss_dssp -CEEHHHHH
T ss_pred -CCcHHHHH
Confidence 67888765
No 285
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.98 E-value=6e-10 Score=115.34 Aligned_cols=82 Identities=12% Similarity=0.300 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.++++++||||+++++++.. +. .++
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~--~~l 216 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED--YYI 216 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE--EEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc--eEE
Confidence 56899999999999997 6789999999864321 112358899999999999999999999864 33 899
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|||||++|+|.+++
T Consensus 217 v~e~~~~g~L~~~l 230 (419)
T 3i6u_A 217 VLELMEGGELFDKV 230 (419)
T ss_dssp EEECCTTCBGGGGT
T ss_pred EEEcCCCCcHHHHH
Confidence 99999999998876
No 286
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=98.97 E-value=6.2e-10 Score=110.82 Aligned_cols=85 Identities=20% Similarity=0.373 Sum_probs=66.1
Q ss_pred CCeeecCCceEEEEEEeC-CC---CEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc----eEE
Q 048796 470 AEVLGRSSHGTLYKATLD-SG---HMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ----ERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g---~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~----~~~ 539 (555)
.+.||+|+||.||+|+.. ++ ..||||.++.. .....+.|.+|+.++++++||||+++++++...... ..+
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 679999999999999973 33 37999999654 233467899999999999999999999999876541 128
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+|+||+++|+|.+++
T Consensus 108 ~v~e~~~~~~L~~~l 122 (323)
T 3qup_A 108 VILPFMKHGDLHAFL 122 (323)
T ss_dssp EEEECCTTCBHHHHH
T ss_pred EEEEeccCCcHHHHH
Confidence 999999999998875
No 287
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=98.97 E-value=6.9e-10 Score=111.00 Aligned_cols=83 Identities=25% Similarity=0.321 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCC-----CEEEEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSG-----HMLTVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g-----~~vavK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|.. ..+ ..||||.+.... ....+.+.+|+.++..+ +||||++++++|...+. .++|
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~lv 128 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP--VLVI 128 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--CEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc--eEEE
Confidence 67899999999999996 233 479999997543 33467799999999999 89999999999988777 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 129 ~e~~~~g~L~~~l 141 (333)
T 2i1m_A 129 TEYCCYGDLLNFL 141 (333)
T ss_dssp EECCTTEEHHHHH
T ss_pred EecCCCCcHHHHH
Confidence 9999999999876
No 288
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=98.97 E-value=9.1e-10 Score=116.35 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=72.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++++++||||+++++++..... .++|+||++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~lv~e~~~ 104 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS--FYIVGELYT 104 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE--EEEEEEcCC
Confidence 67899999999999997 579999999985422 2346789999999999999999999999998776 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 105 ~~~L~~~~ 112 (486)
T 3mwu_A 105 GGELFDEI 112 (486)
T ss_dssp SCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998765
No 289
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=98.97 E-value=9e-10 Score=117.16 Aligned_cols=83 Identities=19% Similarity=0.309 Sum_probs=72.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .|+||||+
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~--l~lVmE~~ 267 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD--LCLVMTIM 267 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE--EEEEECCC
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCE--EEEEEEec
Confidence 56899999999999998 5799999999964322 235678999999999999999999999988766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 268 ~gg~L~~~l 276 (543)
T 3c4z_A 268 NGGDIRYHI 276 (543)
T ss_dssp TTCBHHHHH
T ss_pred cCCCHHHHH
Confidence 999998775
No 290
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=98.96 E-value=2.8e-10 Score=114.57 Aligned_cols=81 Identities=12% Similarity=0.231 Sum_probs=71.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhc-----------------HHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRH-----------------KKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|+. +|+.||||.+....... .+.|.+|+.++.+++||||+++++++..
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 67899999999999999 89999999985432211 1789999999999999999999999998
Q ss_pred CCCceEEEEEeccCCCChhhh
Q 048796 533 PREQERLLLADYIQGDSLALH 553 (555)
Q Consensus 533 ~~~~~~~lv~e~~~~GsL~~~ 553 (555)
.+. .++||||+++|+|.++
T Consensus 115 ~~~--~~lv~e~~~~~~L~~~ 133 (348)
T 2pml_X 115 YDE--VYIIYEYMENDSILKF 133 (348)
T ss_dssp SSE--EEEEEECCTTCBSSEE
T ss_pred CCe--EEEEEeccCCCcHHHH
Confidence 766 9999999999999886
No 291
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=98.96 E-value=5.4e-10 Score=112.87 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=71.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||.++... ....+.+..|..++..+ +||+|+++++++...+. .|+||||
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~--~~lv~E~ 102 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--LYFVMEY 102 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE--EEEEEeC
Confidence 67899999999999998 468899999996532 22356788999999987 89999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 103 ~~gg~L~~~l 112 (353)
T 2i0e_A 103 VNGGDLMYHI 112 (353)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998876
No 292
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=98.96 E-value=1.2e-09 Score=107.38 Aligned_cols=84 Identities=20% Similarity=0.337 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe-CCC---CEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSG---HMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g---~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|++ .++ ..+|+|.+.... ....+.|.+|+.++++++||||+++++++...+. ..++|+||
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~e~ 104 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHVLLPY 104 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEECC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEEEEec
Confidence 67899999999999986 233 379999997533 3346789999999999999999999999976554 14999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+.+|+|.+++
T Consensus 105 ~~~~~L~~~~ 114 (298)
T 3pls_A 105 MCHGDLLQFI 114 (298)
T ss_dssp CTTCBHHHHH
T ss_pred ccCCCHHHHH
Confidence 9999999876
No 293
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=98.96 E-value=1.2e-09 Score=109.45 Aligned_cols=83 Identities=24% Similarity=0.468 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEeC-C----CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD-S----GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~----g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|+.. + +..||||.++... ......|.+|+.++++++||||+++++++...+. .++|||
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e 126 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP--MMIITE 126 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS--EEEEEE
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC--cEEEEe
Confidence 578999999999999862 2 2469999997543 3345679999999999999999999999987776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 127 ~~~~~~L~~~l 137 (333)
T 1mqb_A 127 YMENGALDKFL 137 (333)
T ss_dssp CCTTEEHHHHH
T ss_pred CCCCCcHHHHH
Confidence 99999999876
No 294
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=98.95 E-value=8.3e-10 Score=107.40 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=68.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
.+.||+|+||.||+++. .|+.||||.++... ..+.|.+|+.++.+++||||+++++++...+. ..++||||+++|+
T Consensus 26 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e~~~~~~ 101 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEECCCTTEE
T ss_pred EeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEecCCCCC
Confidence 67899999999999998 58899999997543 45789999999999999999999999765432 2899999999999
Q ss_pred hhhhh
Q 048796 550 LALHL 554 (555)
Q Consensus 550 L~~~l 554 (555)
|.+++
T Consensus 102 L~~~l 106 (278)
T 1byg_A 102 LVDYL 106 (278)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
No 295
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=98.95 E-value=7.8e-10 Score=110.38 Aligned_cols=83 Identities=23% Similarity=0.364 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEE--EEEEeccCC-hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHML--TVKWLRVGL-VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~v--avK~l~~~~-~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+|..+ |||.+.... ....+.+.+|+.++.++ +||||+++++++...+. .++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~lv~e~ 107 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY--LYLAIEY 107 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE--EEEEECC
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc--eEEEEec
Confidence 67999999999999997 466644 999886532 23456799999999999 99999999999988776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 108 ~~~~~L~~~l 117 (327)
T 1fvr_A 108 APHGNLLDFL 117 (327)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
No 296
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=98.95 E-value=7.2e-10 Score=110.74 Aligned_cols=83 Identities=18% Similarity=0.332 Sum_probs=71.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .....+.+|+.++..++ ||||+++++++...+. .++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~--~~lv~e~~ 111 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE--IILILEYA 111 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEECC
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe--EEEEEEec
Confidence 47899999999999997 5799999999865322 33678999999999995 6999999999987766 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 112 ~~~~L~~~~ 120 (327)
T 3lm5_A 112 AGGEIFSLC 120 (327)
T ss_dssp TTEEGGGGG
T ss_pred CCCcHHHHH
Confidence 999998876
No 297
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=98.95 E-value=1e-09 Score=107.05 Aligned_cols=82 Identities=15% Similarity=0.202 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+.. .+..||+|.+.... ....+.|.+|+.++++++||||+++++++.. +. .++||||
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~--~~lv~e~ 96 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP--VWIIMEL 96 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SS--CEEEEEC
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-Cc--cEEEEec
Confidence 678999999999999873 24579999986543 3346789999999999999999999999853 44 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 97 ~~~~~L~~~l 106 (281)
T 1mp8_A 97 CTLGELRSFL 106 (281)
T ss_dssp CTTEEHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999998876
No 298
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=98.95 E-value=9.4e-10 Score=111.67 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEE------eCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC---CCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKAT------LDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR---HPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~---H~niv~l~g~~~~~~~~~~~l 540 (555)
.++||+|+||.||+|+ ..+++.||||.+.... ..++..|+.++..++ |+||+++++++...+. .++
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~--~~l 144 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG--SVL 144 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC--EEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC--cEE
Confidence 6789999999999994 3578899999997543 467888888888887 9999999999998777 999
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|||||++|+|.+++
T Consensus 145 v~e~~~~g~L~~~l 158 (365)
T 3e7e_A 145 VGELYSYGTLLNAI 158 (365)
T ss_dssp EECCCCSCBHHHHH
T ss_pred EEeccCCCcHHHHH
Confidence 99999999999886
No 299
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=98.95 E-value=2.9e-10 Score=111.93 Aligned_cols=83 Identities=20% Similarity=0.299 Sum_probs=57.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+++.+|+.++.+++||||+++++++...+. .++||||+++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~ 97 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE--LWLVMKLLSG 97 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSC--EEEEEECCTT
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC--cEEEehhccC
Confidence 67899999999999997 578999999986543 2335678999999999999999999999998777 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 98 ~~L~~~l 104 (303)
T 2vwi_A 98 GSVLDII 104 (303)
T ss_dssp CBHHHHH
T ss_pred CchHHHH
Confidence 9998875
No 300
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=3.2e-10 Score=114.40 Aligned_cols=201 Identities=17% Similarity=0.153 Sum_probs=134.4
Q ss_pred CCCCCCEEECCCCcCCC-CC-------C---CCCCCCCEEEcCCCcCCC---------CCcccccCCCCccEEEccCCcC
Q 048796 6 NSTTLSVLNLSSNSLSG-TL-------P---TSLKSCVILDLSRNMISG---------DISDMQNWEANLEILDLSSNKL 65 (555)
Q Consensus 6 n~~~L~~L~Ls~N~l~~-~~-------~---~~l~~L~~L~L~~N~l~~---------~~~~~~~~~~~L~~L~Ls~N~l 65 (555)
....++.|.+......+ .. . ..+++|+.|.+..+.... ....++..+++|+.|+|++|.-
T Consensus 105 ~~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 105 KLPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp TGGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred CchhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 44567888888766552 21 1 136799999997654321 1234456678999999999841
Q ss_pred CCCCCccccCCCCccEEEeeCCcCCCCCchhcc--CCCCccEEEcCC--CcCCCC-----Cchhh--hCCCCCCeEEccC
Q 048796 66 SGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLE--ISPRLVTLDVSS--NQLKGP-----IPDNF--FSSMALTNLNLSG 134 (555)
Q Consensus 66 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~--~l~~L~~L~L~~--N~l~~~-----~~~~~--~~~~~L~~L~Ls~ 134 (555)
. .++. + .+++|++|+|..|.+.......+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+
T Consensus 185 l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 185 L-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp C-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred c-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 1 2333 3 388999999999998754434443 789999999853 222211 11122 2478999999999
Q ss_pred CcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcC----CccccCccccceeecccccccCCCchhccC-CCCCC
Q 048796 135 NGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVL----PSDIGNMGRLRLLNLANNHLSGKMPSELSK-LGALE 209 (555)
Q Consensus 135 N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~ 209 (555)
|.+....+..+... ..+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+...-..+.. + ..
T Consensus 262 ~~i~~~~~~~la~a------~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~ 333 (362)
T 2ra8_A 262 AEEQNVVVEMFLES------DILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PM 333 (362)
T ss_dssp CTTHHHHHHHHHHC------SSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CS
T ss_pred CCCchHHHHHHHhC------ccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CC
Confidence 99875433322221 23489999999999998743 333456789999999999998654444543 2 46
Q ss_pred EEeCCCCc
Q 048796 210 YLDLSGNQ 217 (555)
Q Consensus 210 ~L~Ls~N~ 217 (555)
.+++++|+
T Consensus 334 ~~~~~~~~ 341 (362)
T 2ra8_A 334 KIDVSDSQ 341 (362)
T ss_dssp EEECCSBC
T ss_pred EEEecCCc
Confidence 78999887
No 301
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=98.94 E-value=5.7e-10 Score=113.53 Aligned_cols=83 Identities=25% Similarity=0.414 Sum_probs=63.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHH-HHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKK-IGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+++. .+++.||||.++.... ...+.+..|..+ ++.++||||+++++++.+.+. .|+||||
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~--~~lv~E~ 120 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK--LYFVLDY 120 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE--EEEEEEC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE--EEEEEeC
Confidence 67999999999999998 5789999999965332 224456677766 577899999999999998776 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 121 ~~gg~L~~~l 130 (373)
T 2r5t_A 121 INGGELFYHL 130 (373)
T ss_dssp CCSCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999998876
No 302
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=98.94 E-value=1.4e-09 Score=106.89 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=70.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC-----------Cce
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR-----------EQE 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~-----------~~~ 537 (555)
.+.||+|+||.||+|+. .+|+.||||.+... ....+.+.+|+.++++++||||+++++++.... ...
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 67899999999999997 57999999998643 234577999999999999999999999886421 224
Q ss_pred EEEEEeccCCCChhhhh
Q 048796 538 RLLLADYIQGDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l 554 (555)
.++||||+++|+|.+++
T Consensus 90 ~~lv~e~~~~~~L~~~l 106 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLI 106 (303)
T ss_dssp EEEEEECCCSCBHHHHH
T ss_pred eEEEEecCCCCCHHHhh
Confidence 89999999999999876
No 303
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=98.94 E-value=1.8e-09 Score=104.77 Aligned_cols=82 Identities=20% Similarity=0.340 Sum_probs=60.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+. .++||||+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~ 95 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE--IIMVIEYA 95 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSC--EEEEEECC
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCe--EEEEehhc
Confidence 78999999999999997 679999999996532 2235678999999999999999999999998777 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+|+|.+++
T Consensus 96 -~~~l~~~~ 103 (275)
T 2eue_A 96 -GNELFDYI 103 (275)
T ss_dssp -CEEHHHHH
T ss_pred -CCcHHHHH
Confidence 56776654
No 304
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=98.94 E-value=1.9e-09 Score=109.44 Aligned_cols=83 Identities=22% Similarity=0.331 Sum_probs=71.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .+|+.||||.++.... ...+.+.+|+.++.++ +||||+++++++..... .+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--~~ 176 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF--MF 176 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE--EE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE--EE
Confidence 57899999999999998 5799999999865331 1145688999999998 79999999999987766 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||+++|+|.+++
T Consensus 177 lv~e~~~g~~L~~~l 191 (365)
T 2y7j_A 177 LVFDLMRKGELFDYL 191 (365)
T ss_dssp EEECCCTTCBHHHHH
T ss_pred EEEEeCCCCcHHHHH
Confidence 999999999998875
No 305
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=98.94 E-value=9.6e-10 Score=110.56 Aligned_cols=79 Identities=18% Similarity=0.269 Sum_probs=67.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .+.+|+.++.++ +||||+++++++.+.+. .|+||||+++
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~--~~lv~E~~~g 100 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKY--VYVVTELMKG 100 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSE--EEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE--EEEEEeCCCC
Confidence 57899999999999997 5789999999965432 235678888777 79999999999988776 9999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 101 g~L~~~i 107 (342)
T 2qr7_A 101 GELLDKI 107 (342)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998875
No 306
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=98.94 E-value=2.6e-09 Score=104.39 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++++++||||+++++++...+. .++|+||++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 104 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS--FYIVGELYT 104 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE--EEEEECCCC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe--EEEEEEccC
Confidence 67899999999999997 478999999985432 2346789999999999999999999999987766 999999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 105 ~~~L~~~l 112 (287)
T 2wei_A 105 GGELFDEI 112 (287)
T ss_dssp SCBHHHHH
T ss_pred CCCHHHHH
Confidence 99998765
No 307
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.94 E-value=1.6e-09 Score=111.58 Aligned_cols=92 Identities=21% Similarity=0.312 Sum_probs=69.0
Q ss_pred cCHHHHhcccCCeeecCCceEEEEEEeC---CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc
Q 048796 460 FTAEELSRAPAEVLGRSSHGTLYKATLD---SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ 536 (555)
Q Consensus 460 ~~~~~l~~~~~~~lG~G~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~ 536 (555)
..+++.....+++||+|+||.||+|+.. +++.||||.+.... ..+.+.+|+.++++++||||+++++++......
T Consensus 16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 5566666666789999999999999963 57899999996543 245788999999999999999999999654333
Q ss_pred eEEEEEeccCCCChhhhh
Q 048796 537 ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~~l 554 (555)
..++||||+++ +|.+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~ 110 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHII 110 (405)
T ss_dssp EEEEEEECCSE-EHHHHH
T ss_pred eEEEEEeCCCC-CHHHHH
Confidence 49999999985 676654
No 308
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=98.93 E-value=7.6e-10 Score=110.73 Aligned_cols=82 Identities=22% Similarity=0.281 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.++||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.++.+++||||+++++++...+. .++||||++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 107 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR--WYLVFEFVD 107 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE--EEEEEecCC
Confidence 67999999999999997 569999999985432 2235678899999999999999999999988776 999999999
Q ss_pred CCChhhh
Q 048796 547 GDSLALH 553 (555)
Q Consensus 547 ~GsL~~~ 553 (555)
+|+|.++
T Consensus 108 ~~~l~~~ 114 (331)
T 4aaa_A 108 HTILDDL 114 (331)
T ss_dssp EEHHHHH
T ss_pred cchHHHH
Confidence 9988765
No 309
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=98.93 E-value=2e-09 Score=105.73 Aligned_cols=84 Identities=24% Similarity=0.335 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEeCC----CCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLDS----GHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+..+ ...+|||.+.... ....+.|.+|+.++++++||||++++++|...+. ..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~v~e~ 108 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPY 108 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEEEEEC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceEEEEeC
Confidence 6789999999999998622 2368999987533 3345789999999999999999999999765432 38999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 109 ~~~~~L~~~l 118 (298)
T 3f66_A 109 MKHGDLRNFI 118 (298)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
No 310
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=98.93 E-value=1.6e-09 Score=107.40 Aligned_cols=81 Identities=23% Similarity=0.420 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|+.++..++||||+++++++...+. .++||||+++|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~ 109 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTD--LWIVMEYCGAG 109 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTE--EEEEEECCTTE
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCE--EEEEeecCCCC
Confidence 67899999999999998 569999999986533 35678999999999999999999999987766 99999999999
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 110 ~L~~~~ 115 (314)
T 3com_A 110 SVSDII 115 (314)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 998875
No 311
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=98.93 E-value=1.2e-09 Score=107.09 Aligned_cols=80 Identities=20% Similarity=0.324 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++||||++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 84 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCD 84 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCE--EEEEEecCC
Confidence 56899999999999997 5789999999964332 235778999999999999999999999988776 999999998
Q ss_pred CCChhh
Q 048796 547 GDSLAL 552 (555)
Q Consensus 547 ~GsL~~ 552 (555)
+ ++.+
T Consensus 85 ~-~l~~ 89 (292)
T 3o0g_A 85 Q-DLKK 89 (292)
T ss_dssp E-EHHH
T ss_pred C-CHHH
Confidence 6 4443
No 312
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=98.93 E-value=1e-09 Score=107.32 Aligned_cols=81 Identities=25% Similarity=0.429 Sum_probs=68.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhc-------HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRH-------KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~-------~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+++.||||.+....... .+.|.+|+.++.+++||||+++++++... .++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----~~lv 99 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP----PRMV 99 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT----TEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC----CeEE
Confidence 67899999999999997 689999999986433221 26799999999999999999999988643 4799
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 100 ~e~~~~~~L~~~l 112 (287)
T 4f0f_A 100 MEFVPCGDLYHRL 112 (287)
T ss_dssp EECCTTCBHHHHH
T ss_pred EEecCCCCHHHHH
Confidence 9999999998765
No 313
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=98.93 E-value=2e-09 Score=105.53 Aligned_cols=80 Identities=21% Similarity=0.233 Sum_probs=66.6
Q ss_pred eeecCCceEEEEEEe---CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 472 VLGRSSHGTLYKATL---DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.||+|+||.||+|.+ .+++.||||.++.... ...+.|.+|+.++..++||||+++++++. .+. .++||||++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~--~~lv~e~~~ 100 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AES--WMLVMEMAE 100 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSS--EEEEEECCT
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-CCC--cEEEEEeCC
Confidence 899999999999965 3578899999965432 23578999999999999999999999994 445 899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 101 ~~~L~~~l 108 (291)
T 1xbb_A 101 LGPLNKYL 108 (291)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99999876
No 314
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=98.92 E-value=1.7e-09 Score=107.58 Aligned_cols=82 Identities=13% Similarity=0.298 Sum_probs=67.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|+. .+++.||||.+..... .....+.+|+.++.+++||||+++++++... . .++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~--~~l 91 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-D--YYI 91 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-S--EEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-c--eEE
Confidence 67899999999999997 5789999999864321 1234588999999999999999999998753 4 899
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+++|+|.+++
T Consensus 92 v~e~~~~~~L~~~~ 105 (322)
T 2ycf_A 92 VLELMEGGELFDKV 105 (322)
T ss_dssp EEECCTTEETHHHH
T ss_pred EEecCCCCcHHHHH
Confidence 99999999998875
No 315
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.92 E-value=1.5e-09 Score=108.31 Aligned_cols=82 Identities=23% Similarity=0.319 Sum_probs=64.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCE----EEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM----LTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|++ .+|+. ||+|.+.... ....+.|.+|+.++++++||||++++++|... . .++|+|
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~--~~~v~e 96 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T--VQLITQ 96 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-S--EEEEEE
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-C--eEEEEE
Confidence 67999999999999996 44543 5888875432 34467899999999999999999999999864 3 789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 97 ~~~~g~L~~~l 107 (327)
T 3poz_A 97 LMPFGCLLDYV 107 (327)
T ss_dssp CCTTCBHHHHH
T ss_pred ecCCCcHHHHH
Confidence 99999999876
No 316
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=98.92 E-value=8.8e-10 Score=110.20 Aligned_cols=82 Identities=21% Similarity=0.310 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~ 116 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR--LHLIFEYAE 116 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE--EEEEEecCC
Confidence 67899999999999986 5789999999965433 224678899999999999999999999988776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 117 ~-~L~~~~ 123 (329)
T 3gbz_A 117 N-DLKKYM 123 (329)
T ss_dssp E-EHHHHH
T ss_pred C-CHHHHH
Confidence 5 888765
No 317
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.91 E-value=2.2e-09 Score=105.77 Aligned_cols=83 Identities=18% Similarity=0.281 Sum_probs=67.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||++.. .+++.+|||.+.... ....+.+.+|+.++++++||||+++++++...+....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 78999999999999997 578999999996532 2235789999999999999999999999864433338999999
Q ss_pred cCCCChhhh
Q 048796 545 IQGDSLALH 553 (555)
Q Consensus 545 ~~~GsL~~~ 553 (555)
+++| |.++
T Consensus 90 ~~~~-l~~~ 97 (305)
T 2wtk_C 90 CVCG-MQEM 97 (305)
T ss_dssp CSEE-HHHH
T ss_pred ccCC-HHHH
Confidence 9987 5544
No 318
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=98.91 E-value=1.6e-09 Score=106.59 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=65.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcC--CCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGP--REQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~--~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|++ +|+.||||.+... ..+.+..|.+++.. ++||||+++++++... .....++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 67899999999999998 7899999998653 34556667766665 8999999999987542 122389999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 89 ~~g~L~~~l 97 (301)
T 3q4u_A 89 EMGSLYDYL 97 (301)
T ss_dssp TTCBHHHHH
T ss_pred cCCCHHHHH
Confidence 999999876
No 319
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=98.91 E-value=1.2e-09 Score=111.23 Aligned_cols=84 Identities=25% Similarity=0.390 Sum_probs=69.0
Q ss_pred CCeeecCCceEEEEEEe--CCC--CEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL--DSG--HMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g--~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|++ .++ ..+|||.++... ....+.|.+|+.++++++||||++++++|...+. ..++||||
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~lv~e~ 172 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPLVVLPY 172 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCEEEEEC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeEEEEEC
Confidence 57899999999999986 232 468999986532 3446789999999999999999999999865432 28999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 173 ~~~g~L~~~l 182 (373)
T 3c1x_A 173 MKHGDLRNFI 182 (373)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999999876
No 320
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=98.90 E-value=2.1e-09 Score=104.73 Aligned_cols=82 Identities=20% Similarity=0.290 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++. .+..||||.+... .....+.|.+|+.++++++||||+++++++.. +. .++||||
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~--~~~v~e~ 93 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP--TWIIMEL 93 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS--CEEEEEC
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC--CEEEEec
Confidence 679999999999999862 2346999999754 33346789999999999999999999999865 34 7999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 94 ~~~~~L~~~l 103 (281)
T 3cc6_A 94 YPYGELGHYL 103 (281)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCCHHHHH
Confidence 9999998876
No 321
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=98.90 E-value=3.2e-09 Score=105.91 Aligned_cols=82 Identities=22% Similarity=0.346 Sum_probs=70.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+... ..+.+.+|+.++.+++ ||||+++++++........++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 67999999999999986 67999999998743 3477899999999997 9999999999987433338999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 118 ~~l~~~~ 124 (330)
T 3nsz_A 118 TDFKQLY 124 (330)
T ss_dssp CCHHHHG
T ss_pred hhHHHHH
Confidence 9998765
No 322
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=98.90 E-value=2.1e-09 Score=106.60 Aligned_cols=84 Identities=21% Similarity=0.278 Sum_probs=65.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC------------CCc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP------------REQ 536 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~------------~~~ 536 (555)
.+.||+|+||.||+|+. .+|+.||||.+........+.+.+|+.++++++||||+++++++... ...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 67899999999999998 46899999999776666678899999999999999999999987432 112
Q ss_pred eEEEEEeccCCCChhhhh
Q 048796 537 ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 537 ~~~lv~e~~~~GsL~~~l 554 (555)
..++||||++ |+|.+++
T Consensus 96 ~~~lv~e~~~-~~L~~~~ 112 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVL 112 (320)
T ss_dssp EEEEEEECCS-EEHHHHH
T ss_pred ceeEEeeccC-CCHHHHh
Confidence 3899999998 6898775
No 323
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=98.90 E-value=1.7e-09 Score=107.76 Aligned_cols=84 Identities=18% Similarity=0.353 Sum_probs=71.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCC----CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPR----EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~----~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ..+.+.+|+.++.++ +||||+++++++.... ....++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 67899999999999997 6799999999865432 357789999999998 8999999999997632 223899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 108 ~~~~~~L~~~l 118 (326)
T 2x7f_A 108 FCGAGSVTDLI 118 (326)
T ss_dssp CCTTEEHHHHH
T ss_pred cCCCCcHHHHH
Confidence 99999998876
No 324
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=98.89 E-value=1.7e-09 Score=105.28 Aligned_cols=81 Identities=20% Similarity=0.369 Sum_probs=68.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--------------C
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--------------R 534 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--------------~ 534 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... +.+.+|+.++.+++||||+++++++... .
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 67899999999999998 479999999996543 3567899999999999999999987541 1
Q ss_pred CceEEEEEeccCCCChhhhh
Q 048796 535 EQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 535 ~~~~~lv~e~~~~GsL~~~l 554 (555)
....++||||+++|+|.+++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l 111 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWI 111 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHH
T ss_pred cceEEEEEeccCCCCHHHHH
Confidence 12379999999999999876
No 325
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=98.89 E-value=1.5e-09 Score=107.44 Aligned_cols=84 Identities=21% Similarity=0.339 Sum_probs=70.3
Q ss_pred CCeeecCCceEEEEEEe------CCCCEEEEEEeccCCh-hcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL------DSGHMLTVKWLRVGLV-RHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+++.||||.+..... ...+.+.+|+.++.++ +||||+++++++...+. ..++|
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~-~~~lv 110 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-PLMVI 110 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-CCEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC-ceEEE
Confidence 67899999999999984 3568899999976433 3456799999999999 79999999999876432 38999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+||+++|+|.+++
T Consensus 111 ~e~~~~~~L~~~l 123 (316)
T 2xir_A 111 VEFCKFGNLSTYL 123 (316)
T ss_dssp EECCTTEEHHHHH
T ss_pred EEcCCCCcHHHHH
Confidence 9999999999876
No 326
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.88 E-value=3.7e-10 Score=113.26 Aligned_cols=82 Identities=10% Similarity=0.164 Sum_probs=65.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--------hhcHHHHHHHHHHHHcCC---------CCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--------VRHKKEFAKEVKKIGSMR---------HPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--------~~~~~~~~~ei~~l~~l~---------H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|+.++++++ |||||++.+.+..
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 78999999999999998 78999999996532 123478899999998885 8888888876531
Q ss_pred ------------------------------CCCceEEEEEeccCCCChhhhh
Q 048796 533 ------------------------------PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ------------------------------~~~~~~~lv~e~~~~GsL~~~l 554 (555)
.+. .++||||+++|++.+.+
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~--~~lv~E~~~~g~ll~~~ 153 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ--LFIVLEFEFGGIDLEQM 153 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTC--EEEEEEEECCCEETGGG
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCe--EEEEEEecCCCccHHHH
Confidence 344 99999999999766554
No 327
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=98.87 E-value=5e-09 Score=105.03 Aligned_cols=81 Identities=22% Similarity=0.342 Sum_probs=68.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcCCC--ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGPRE--QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~~~--~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. +|+.||||.+... ..+.+.+|+.++.. ++||||+++++++..... ...++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 67899999999999998 6899999998643 34677888888877 799999999999987651 1289999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 123 ~~g~L~~~l 131 (342)
T 1b6c_B 123 EHGSLFDYL 131 (342)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHH
Confidence 999999876
No 328
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=98.87 E-value=2.2e-09 Score=106.31 Aligned_cols=85 Identities=20% Similarity=0.371 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc---eEEE
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ---ERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~---~~~l 540 (555)
.+.||+|+||.||+|... .+..||||.+... .....+.|.+|+.++++++||||+++++++...+.. ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 678999999999999862 3458999998654 233457799999999999999999999999765431 2599
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
|+||+++|+|.+++
T Consensus 119 v~e~~~~~~L~~~l 132 (313)
T 3brb_A 119 ILPFMKYGDLHTYL 132 (313)
T ss_dssp EEECCTTCBHHHHH
T ss_pred EEecccCCCHHHHH
Confidence 99999999998876
No 329
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=98.87 E-value=4.8e-09 Score=103.88 Aligned_cols=82 Identities=23% Similarity=0.281 Sum_probs=65.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .+|+.||||++.... ......+..|+..+.++ +||||++++++|...+. .++||||+
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~--~~lv~e~~ 139 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGI--LYLQTELC 139 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE--EEEEEECC
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCE--EEEEEecc
Confidence 67899999999999998 479999999986432 23344566666665554 99999999999988776 99999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+|+|.+++
T Consensus 140 -~~~L~~~~ 147 (311)
T 3p1a_A 140 -GPSLQQHC 147 (311)
T ss_dssp -CCBHHHHH
T ss_pred -CCCHHHHH
Confidence 66887764
No 330
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=98.86 E-value=9.5e-10 Score=111.23 Aligned_cols=83 Identities=24% Similarity=0.414 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEe----CCCCEEEEEEeccCC----hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL----DSGHMLTVKWLRVGL----VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+++. .+|+.||||.++... ....+.+.+|+.++..+ +||||+++++++...+. .++
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~--~~l 136 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK--LHL 136 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE--EEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce--EEE
Confidence 67899999999999987 378999999986432 12345678899999999 69999999999987776 999
Q ss_pred EEeccCCCChhhhh
Q 048796 541 LADYIQGDSLALHL 554 (555)
Q Consensus 541 v~e~~~~GsL~~~l 554 (555)
||||+++|+|.+++
T Consensus 137 v~e~~~~~~L~~~l 150 (355)
T 1vzo_A 137 ILDYINGGELFTHL 150 (355)
T ss_dssp EECCCCSCBHHHHH
T ss_pred EeecCCCCCHHHHH
Confidence 99999999998876
No 331
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.86 E-value=2.9e-09 Score=110.67 Aligned_cols=84 Identities=15% Similarity=0.195 Sum_probs=69.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC---ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE---QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~---~~~~lv~e 543 (555)
.++||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++..... ...|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 67899999999999997 57889999999653 23346789999999999999999999999876521 23899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|++ |+|.+++
T Consensus 111 ~~~-~~L~~~~ 120 (432)
T 3n9x_A 111 IAD-SDLKKLF 120 (432)
T ss_dssp CCS-EEHHHHH
T ss_pred cCC-cCHHHHH
Confidence 997 4888765
No 332
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=98.86 E-value=2.7e-09 Score=104.79 Aligned_cols=82 Identities=22% Similarity=0.382 Sum_probs=67.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++...+. .++||||++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~ 85 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLH 85 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTE--EEEEEECCS
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCc--eEEEEEccc
Confidence 56899999999999997 5799999999865332 234778999999999999999999999988776 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
|+|.+++
T Consensus 86 -~~L~~~~ 92 (299)
T 2r3i_A 86 -QDLKKFM 92 (299)
T ss_dssp -EEHHHHH
T ss_pred -CCHHHHH
Confidence 5887765
No 333
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.86 E-value=8.5e-10 Score=110.04 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+++.||||.+...... ....+.+|+.++++++||||+++++++...+. .++||||+++
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e~~~~ 84 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS--LTLVFEYLDK 84 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC--EEEEEECCSE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE--EEEEeccccc
Confidence 56899999999999997 57899999999654322 12345689999999999999999999998777 9999999984
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
+|.+++
T Consensus 85 -~l~~~~ 90 (324)
T 3mtl_A 85 -DLKQYL 90 (324)
T ss_dssp -EHHHHH
T ss_pred -CHHHHH
Confidence 787654
No 334
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=98.85 E-value=2.5e-09 Score=107.72 Aligned_cols=82 Identities=22% Similarity=0.422 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh-----cHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR-----HKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++..++||||+++++++...+. .++|||
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e 92 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN--ISLVFD 92 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC--CEEEEE
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc--eEEEEE
Confidence 67899999999999997 57999999999653221 13468899999999999999999999987776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++ +|.+++
T Consensus 93 ~~~~-~l~~~~ 102 (346)
T 1ua2_A 93 FMET-DLEVII 102 (346)
T ss_dssp CCSE-EHHHHH
T ss_pred cCCC-CHHHHH
Confidence 9986 777654
No 335
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.85 E-value=3e-09 Score=109.38 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=64.7
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHH-HcCCCCcceeeeEEEEc--CCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKI-GSMRHPNIVPLRAYYWG--PREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l-~~l~H~niv~l~g~~~~--~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+|+. .+|+.||||.++. ...+.+|+.++ +..+||||+++++++.. .+....|+|||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 5899999999999997 5799999999863 24567888876 45689999999998864 12223899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 143 gg~L~~~l 150 (400)
T 1nxk_A 143 GGELFSRI 150 (400)
T ss_dssp SEEHHHHH
T ss_pred CCcHHHHH
Confidence 99999876
No 336
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=98.85 E-value=4.4e-09 Score=106.41 Aligned_cols=81 Identities=17% Similarity=0.192 Sum_probs=70.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-----CCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-----HPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-----H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+++.||||.+... ....+.+..|+.++..++ ||||+++++++...+. .++|||
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~--~~lv~e 116 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH--MCLIFE 116 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE--EEEEEC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe--eEEEEc
Confidence 67899999999999997 67899999999643 234567788999999886 9999999999988776 999999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+ +|+|.+++
T Consensus 117 ~~-~~~L~~~~ 126 (360)
T 3llt_A 117 PL-GPSLYEII 126 (360)
T ss_dssp CC-CCBHHHHH
T ss_pred CC-CCCHHHHH
Confidence 99 88998875
No 337
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=98.85 E-value=3.5e-09 Score=103.63 Aligned_cols=80 Identities=29% Similarity=0.433 Sum_probs=67.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+.. ..+|||.++... ....+.|.+|+.++++++||||+++++++.. +. .++||||+++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~--~~lv~e~~~~ 103 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQ--LAIVTQWCEG 103 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS--CEEEEECCCE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC-Cc--cEEEEEecCC
Confidence 678999999999999873 359999986543 3345789999999999999999999997643 44 7999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 104 ~~L~~~l 110 (289)
T 3og7_A 104 SSLYHHL 110 (289)
T ss_dssp EEHHHHH
T ss_pred CcHHHHH
Confidence 9998876
No 338
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.84 E-value=3.2e-09 Score=108.71 Aligned_cols=84 Identities=20% Similarity=0.331 Sum_probs=62.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++..+. ||||+++++++...+....|+|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 57899999999999997 67999999998543 2334677889999999997 99999999999865533489999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
+ |+|.+++
T Consensus 94 ~-~~L~~~~ 101 (388)
T 3oz6_A 94 E-TDLHAVI 101 (388)
T ss_dssp S-EEHHHHH
T ss_pred C-cCHHHHH
Confidence 8 5887764
No 339
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.84 E-value=1.5e-09 Score=108.18 Aligned_cols=82 Identities=26% Similarity=0.332 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCE----EEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM----LTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.+.||+|+||.||+|++ .++.. ||+|.+.... ....+.+.+|+.+++.++||||++++++|.. +. .++|+|
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~--~~~v~e 94 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SS--LQLVTQ 94 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SS--EEEEEE
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Cc--cEEEEE
Confidence 67899999999999997 45544 7888775432 2334567889999999999999999999864 44 899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 95 ~~~~~~L~~~l 105 (325)
T 3kex_A 95 YLPLGSLLDHV 105 (325)
T ss_dssp CCTTCBSHHHH
T ss_pred eCCCCCHHHHH
Confidence 99999998875
No 340
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.84 E-value=2.8e-09 Score=111.63 Aligned_cols=84 Identities=12% Similarity=0.132 Sum_probs=60.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---CceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---EQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~e 543 (555)
.++||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++..++|||||++++++.... ....|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 78999999999999987 57999999999653 2334678999999999999999999999985432 123899999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+. |+|.+++
T Consensus 138 ~~~-~~L~~~~ 147 (458)
T 3rp9_A 138 IAD-SDFKKLF 147 (458)
T ss_dssp CCS-EEHHHHH
T ss_pred ccc-cchhhhc
Confidence 985 5887764
No 341
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.84 E-value=2.6e-09 Score=106.74 Aligned_cols=84 Identities=25% Similarity=0.277 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcC------CCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGP------REQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~------~~~~~~lv 541 (555)
.++||+|+||.||+|+. .+|+.||||++........+.+.+|+.++.++. ||||+++++++... .....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 77999999999999997 579999999986665556778999999999996 99999999998421 22237999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
+||++ |+|.+++
T Consensus 113 ~e~~~-g~L~~~l 124 (337)
T 3ll6_A 113 TELCK-GQLVEFL 124 (337)
T ss_dssp EECCS-EEHHHHH
T ss_pred EEecC-CCHHHHH
Confidence 99996 6888765
No 342
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.84 E-value=3.5e-09 Score=104.72 Aligned_cols=80 Identities=29% Similarity=0.416 Sum_probs=67.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+.. ..+|||.++.. .....+.|.+|+.++.+++||||+++++++.. +. .++||||+++
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~--~~lv~e~~~~ 115 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN--LAIVTQWCEG 115 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS--CEEEEECCSS
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-Cc--EEEEEecCCC
Confidence 678999999999999873 36899988653 23345789999999999999999999998754 44 7999999999
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 116 ~~L~~~l 122 (307)
T 3lb7_A 116 SSLYKHL 122 (307)
T ss_dssp CBHHHHH
T ss_pred CcHHHHH
Confidence 9998876
No 343
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.83 E-value=7.1e-09 Score=101.24 Aligned_cols=82 Identities=18% Similarity=0.248 Sum_probs=64.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hc-HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RH-KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~-~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||++..... .. .+.+.++...++.++||||+++++++...+. .++||||++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~--~~lv~e~~~ 89 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD--VWICMELMD 89 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS--EEEEEECCS
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC--EEEEEehhc
Confidence 67899999999999997 6899999999965422 22 3334455556888999999999999998777 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 90 ~-~l~~~l 96 (290)
T 3fme_A 90 T-SLDKFY 96 (290)
T ss_dssp E-EHHHHH
T ss_pred c-chHHHH
Confidence 5 776654
No 344
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=98.83 E-value=2.1e-09 Score=107.39 Aligned_cols=80 Identities=11% Similarity=0.094 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .+.+.+|+.++.++ +||||+++++++...+. .++||||+ +
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~--~~lv~e~~-~ 88 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY--NAMVLELL-G 88 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE--EEEEEECC-C
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc--cEEEEEeC-C
Confidence 67899999999999996 6899999999865332 34688999999999 99999999999988766 89999999 9
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 89 ~~L~~~~ 95 (330)
T 2izr_A 89 PSLEDLF 95 (330)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9998875
No 345
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.83 E-value=2e-09 Score=107.86 Aligned_cols=83 Identities=16% Similarity=0.223 Sum_probs=70.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+. .++
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~--~~l 106 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF--FQL 106 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE--EEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE--EEE
Confidence 67899999999999996 6789999999865321 123457889999999999999999999987776 999
Q ss_pred EEeccCCC-Chhhhh
Q 048796 541 LADYIQGD-SLALHL 554 (555)
Q Consensus 541 v~e~~~~G-sL~~~l 554 (555)
||||+.+| +|.+++
T Consensus 107 v~e~~~~g~~l~~~~ 121 (335)
T 3dls_A 107 VMEKHGSGLDLFAFI 121 (335)
T ss_dssp EEECCTTSCBHHHHH
T ss_pred EEEeCCCCccHHHHH
Confidence 99999887 888765
No 346
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.82 E-value=2.7e-09 Score=108.36 Aligned_cols=84 Identities=19% Similarity=0.279 Sum_probs=63.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+. .+.++||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 67899999999999997 67999999999543 22335778999999999999999999999876532 2369999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+ +++|.+++
T Consensus 110 e~~-~~~L~~~~ 120 (367)
T 1cm8_A 110 PFM-GTDLGKLM 120 (367)
T ss_dssp ECC-SEEHHHHH
T ss_pred ecC-CCCHHHHH
Confidence 999 77888765
No 347
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=98.82 E-value=2.9e-09 Score=107.86 Aligned_cols=84 Identities=18% Similarity=0.273 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh-----------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---C
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV-----------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---E 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~-----------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~ 535 (555)
.+.||+|+||.||+|+..+|..||||++..... ...+.+.+|+.++.+++||||+++++++...+ .
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 678999999999999987799999999854221 11378999999999999999999999985422 1
Q ss_pred ceEEEEEeccCCCChhhhh
Q 048796 536 QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l 554 (555)
...++||||++ |+|.+++
T Consensus 107 ~~~~lv~e~~~-~~l~~~~ 124 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVI 124 (362)
T ss_dssp CEEEEEEECCS-EEHHHHH
T ss_pred ceEEEEEccCC-CCHHHHH
Confidence 23799999998 5777654
No 348
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=98.82 E-value=4.3e-09 Score=105.80 Aligned_cols=82 Identities=10% Similarity=0.233 Sum_probs=70.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCC--CcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRH--PNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H--~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++...+++.||||.+... .....+.|.+|+.++.+++| +||+++++++...+. .++||| +
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~--~~lv~e-~ 90 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVME-C 90 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEC-C
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE--EEEEEe-C
Confidence 6789999999999999888999999998643 23345789999999999987 999999999998776 999999 5
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 91 ~~~~L~~~l 99 (343)
T 3dbq_A 91 GNIDLNSWL 99 (343)
T ss_dssp CSEEHHHHH
T ss_pred CCCCHHHHH
Confidence 678998875
No 349
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.82 E-value=6.1e-09 Score=102.49 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=65.6
Q ss_pred CeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHH-HcCCCCcceeeeEEEEc--CCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKI-GSMRHPNIVPLRAYYWG--PREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l-~~l~H~niv~l~g~~~~--~~~~~~~lv~e~~~ 546 (555)
++||+|+||.||+++. .+++.||||.++. ...+.+|+.++ +..+||||+++++++.. .+....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 6799999999999997 6799999999864 24577888887 66799999999999865 11223899999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 99 ~~~L~~~l 106 (299)
T 3m2w_A 99 GGELFSRI 106 (299)
T ss_dssp SCBHHHHH
T ss_pred CCcHHHHH
Confidence 99998876
No 350
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.82 E-value=9.2e-09 Score=103.12 Aligned_cols=82 Identities=18% Similarity=0.295 Sum_probs=67.3
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHH-HHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKK-IGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~-l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... .....++..|+.. ++.++||||+++++++...+. .++||||++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~--~~lv~e~~~ 133 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD--VWICMELMD 133 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSC--EEEEECCCS
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCc--EEEEHHHhh
Confidence 56899999999999997 689999999996542 2334556666665 788999999999999998777 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 134 ~-~L~~~l 140 (340)
T 3an0_A 134 T-SLDKFY 140 (340)
T ss_dssp E-EHHHHH
T ss_pred C-cHHHHH
Confidence 5 887664
No 351
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.81 E-value=3.8e-09 Score=110.75 Aligned_cols=83 Identities=18% Similarity=0.234 Sum_probs=68.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+. .+.|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 67899999999999987 57899999999653 33346778999999999999999999999965432 2479999
Q ss_pred eccCCCChhhh
Q 048796 543 DYIQGDSLALH 553 (555)
Q Consensus 543 e~~~~GsL~~~ 553 (555)
|||+++ |.+.
T Consensus 147 E~~~~~-l~~~ 156 (464)
T 3ttj_A 147 ELMDAN-LCQV 156 (464)
T ss_dssp ECCSEE-HHHH
T ss_pred eCCCCC-HHHH
Confidence 999875 5544
No 352
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.80 E-value=8.8e-09 Score=105.47 Aligned_cols=82 Identities=10% Similarity=0.227 Sum_probs=70.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||++...+++.||||.+... .....+.|.+|+.++.+++ ||||+++++++...+. .++||| +
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~--~~lv~E-~ 137 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVME-C 137 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEEE-C
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE--EEEEEe-c
Confidence 6789999999999999877999999998643 3344678999999999996 5999999999988776 999999 5
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 138 ~~~~L~~~l 146 (390)
T 2zmd_A 138 GNIDLNSWL 146 (390)
T ss_dssp CSEEHHHHH
T ss_pred CCCCHHHHH
Confidence 678998876
No 353
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.80 E-value=1.8e-09 Score=110.16 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=66.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC---ChhcHHHHHHHH---HHHHcCCCCcceeee-------EEEEcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG---LVRHKKEFAKEV---KKIGSMRHPNIVPLR-------AYYWGPRE 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~ei---~~l~~l~H~niv~l~-------g~~~~~~~ 535 (555)
.+.||+|+||.||+|+. .+|+.||||.+... .....+.|.+|+ ..+++++|||||+++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 67899999999999997 67999999999642 223457899999 566677899999998 66654421
Q ss_pred ----------c-----eEEEEEeccCCCChhhhh
Q 048796 536 ----------Q-----ERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ----------~-----~~~lv~e~~~~GsL~~~l 554 (555)
. ..++||||+ +|+|.+++
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l 190 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFG 190 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHH
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHH
Confidence 0 178999999 68999876
No 354
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.80 E-value=1e-08 Score=102.44 Aligned_cols=81 Identities=22% Similarity=0.290 Sum_probs=64.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc--CCCCcceeeeEEEEcCCC--ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS--MRHPNIVPLRAYYWGPRE--QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~--l~H~niv~l~g~~~~~~~--~~~~lv~e~~ 545 (555)
.+.||+|+||.||+|+. .|+.||||.+.... ...+..|.+++.. ++||||+++++++..... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEE-CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 67999999999999998 48999999985432 3445556666555 499999999999986621 2389999999
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
++|+|.+++
T Consensus 118 ~~g~L~~~l 126 (337)
T 3mdy_A 118 ENGSLYDYL 126 (337)
T ss_dssp TTCBHHHHH
T ss_pred CCCcHHHHh
Confidence 999999876
No 355
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.80 E-value=9e-09 Score=112.50 Aligned_cols=82 Identities=15% Similarity=0.205 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|++. .+..||||.+.... ....+.|.+|+.++++++||||+++++++.. +. .++||||
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~--~~lv~E~ 471 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP--VWIIMEL 471 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS--CEEEEEC
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc--eEEEEEc
Confidence 678999999999999872 25679999986543 3345789999999999999999999999853 44 8999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 472 ~~~g~L~~~l 481 (656)
T 2j0j_A 472 CTLGELRSFL 481 (656)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 356
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.79 E-value=7.2e-09 Score=103.42 Aligned_cols=82 Identities=23% Similarity=0.316 Sum_probs=68.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCE----EEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM----LTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~----vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e 543 (555)
.++||+|+||.||+|+. .+++. ||+|.+... .....+.+.+|+.++..++||||++++++|... . .++|+|
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~--~~~v~~ 96 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T--VQLITQ 96 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-S--EEEEEC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-C--ceEEEE
Confidence 67899999999999996 45543 577777543 334568899999999999999999999999864 3 789999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 97 ~~~~g~L~~~l 107 (327)
T 3lzb_A 97 LMPFGCLLDYV 107 (327)
T ss_dssp CCSSCBHHHHH
T ss_pred ecCCCcHHHHH
Confidence 99999998876
No 357
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.79 E-value=6.8e-09 Score=104.57 Aligned_cols=84 Identities=18% Similarity=0.242 Sum_probs=68.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---CceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---EQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ......+.+|+.+++.++||||+++++++.... ....++|+||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 67899999999999997 578999999996533 234567889999999999999999999886531 1238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
++ |+|.+++
T Consensus 96 ~~-~~L~~~~ 104 (353)
T 2b9h_A 96 MQ-TDLHRVI 104 (353)
T ss_dssp CS-EEHHHHH
T ss_pred cC-ccHHHHH
Confidence 98 5887764
No 358
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.78 E-value=5.7e-09 Score=106.63 Aligned_cols=59 Identities=22% Similarity=0.344 Sum_probs=49.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ...+|+.+++.++||||+++++++..
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~ 71 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYT 71 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeee
Confidence 67999999999999997 6899999999864322 23479999999999999999999854
No 359
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.78 E-value=8.6e-09 Score=102.72 Aligned_cols=82 Identities=18% Similarity=0.312 Sum_probs=66.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHH-HHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVK-KIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~-~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|.. .+|+.||||.+.... .....++..|+. +++.++||||+++++++...+. .++||||++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~--~~lv~e~~~ 104 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD--CWICMELMS 104 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE--EEEEECCCS
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc--eEEEEeecC
Confidence 78999999999999998 579999999996543 233456666666 7788899999999999988766 999999998
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+ +|.+++
T Consensus 105 ~-~l~~~~ 111 (327)
T 3aln_A 105 T-SFDKFY 111 (327)
T ss_dssp E-EHHHHH
T ss_pred C-ChHHHH
Confidence 6 666543
No 360
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.78 E-value=5.4e-09 Score=102.17 Aligned_cols=82 Identities=26% Similarity=0.369 Sum_probs=61.8
Q ss_pred CCeeecCCceEEEEEEe--CCCC--EEEEEEeccCC---hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGH--MLTVKWLRVGL---VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~--~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|++ .++. .||||.++... ....+.|.+|+.++.+++||||+++++++... . .++|+
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~--~~~v~ 99 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-P--MKMVT 99 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-S--CEEEE
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC-C--ceeeE
Confidence 67899999999999986 2333 68999886532 23457899999999999999999999998764 3 79999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++|+|.+++
T Consensus 100 e~~~~~~L~~~l 111 (291)
T 1u46_A 100 ELAPLGSLLDRL 111 (291)
T ss_dssp ECCTTCBHHHHH
T ss_pred ecccCCCHHHHH
Confidence 999999998875
No 361
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.78 E-value=8.5e-09 Score=104.52 Aligned_cols=84 Identities=17% Similarity=0.181 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC---CceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR---EQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~---~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++.+++||||+++++++.... ....++|+||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 67899999999999997 578899999997533 233577999999999999999999999986543 1238999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++ +|.+++
T Consensus 112 ~~~-~L~~~l 120 (364)
T 3qyz_A 112 MET-DLYKLL 120 (364)
T ss_dssp CSE-EHHHHH
T ss_pred cCc-CHHHHH
Confidence 984 887764
No 362
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.78 E-value=1.3e-08 Score=103.59 Aligned_cols=84 Identities=17% Similarity=0.219 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|.. .+|+.||||.+... .....+.+.+|+.+++.++||||+++++++...+. ...++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 67899999999999987 57899999999653 23345778999999999999999999999976541 1389999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+++ +|.+++
T Consensus 110 e~~~~-~l~~~~ 120 (371)
T 2xrw_A 110 ELMDA-NLCQVI 120 (371)
T ss_dssp ECCSE-EHHHHH
T ss_pred EcCCC-CHHHHH
Confidence 99985 676654
No 363
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.77 E-value=3.5e-09 Score=116.62 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=68.6
Q ss_pred CCeeecCCceEEEEEEeC--CCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc---eEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATLD--SGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ---ERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~--~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~---~~~lv~e 543 (555)
.++||+|+||.||+|+.. +|+.||||.+... .....+.|.+|+.++.+++||||+++++++...+.. ..|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 678999999999999973 6899999998643 333456789999999999999999999998754321 1599999
Q ss_pred ccCCCChhhhh
Q 048796 544 YIQGDSLALHL 554 (555)
Q Consensus 544 ~~~~GsL~~~l 554 (555)
|+++|+|.+++
T Consensus 165 ~~~g~~L~~~~ 175 (681)
T 2pzi_A 165 YVGGQSLKRSK 175 (681)
T ss_dssp CCCCEECC---
T ss_pred eCCCCcHHHHH
Confidence 99999998764
No 364
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.75 E-value=5.3e-09 Score=114.74 Aligned_cols=83 Identities=18% Similarity=0.308 Sum_probs=70.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC---hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+++.||||.++... ....+.+..|..++..+ +||+|+.+++++.+.+. .|+||||
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~--~~lV~E~ 423 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR--LYFVMEY 423 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE--EEEEEEC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE--EEEEEeC
Confidence 67899999999999997 578899999996432 22356788899999987 79999999999887766 9999999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.++|
T Consensus 424 ~~gg~L~~~l 433 (674)
T 3pfq_A 424 VNGGDLMYHI 433 (674)
T ss_dssp CCSCBHHHHH
T ss_pred cCCCcHHHHH
Confidence 9999999876
No 365
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.75 E-value=1.4e-08 Score=103.24 Aligned_cols=84 Identities=19% Similarity=0.253 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCc----eEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQ----ERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~----~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++...+.. +.++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 67899999999999997 579999999996532 23357889999999999999999999999765540 139999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||++ |+|.+++
T Consensus 127 e~~~-~~l~~~~ 137 (371)
T 4exu_A 127 PFMQ-TDLQKIM 137 (371)
T ss_dssp ECCC-EEHHHHT
T ss_pred cccc-ccHHHHh
Confidence 9998 5787654
No 366
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.75 E-value=1.1e-07 Score=97.46 Aligned_cols=192 Identities=10% Similarity=0.075 Sum_probs=107.4
Q ss_pred CCCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc--------------------
Q 048796 29 KSCVILDLSRNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS-------------------- 88 (555)
Q Consensus 29 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------------- 88 (555)
.+|+.+.+.++ +..+....|..+.+|+.+++..| ++.+...+|.++..|+.+.+..+.
T Consensus 162 ~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~ 239 (394)
T 4fs7_A 162 ESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPD 239 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECT
T ss_pred CCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEECC
Confidence 34555555433 22233444555555555555444 332333344444444444443332
Q ss_pred -CCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccC
Q 048796 89 -VTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSG 167 (555)
Q Consensus 89 -l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~ 167 (555)
++......+..+..|+.+.+..+... .....|..+..++.+.+..+.+. .. .+..+.+|+.+.+..
T Consensus 240 ~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~---------~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 240 SFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EK---------TFYGCSSLTEVKLLD 306 (394)
T ss_dssp TCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TT---------TTTTCTTCCEEEECT
T ss_pred CceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cc---------ccccccccccccccc
Confidence 22223334555555555555544332 33444555555555555443321 11 123447888888875
Q ss_pred CcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccC
Q 048796 168 NALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYN 238 (555)
Q Consensus 168 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N 238 (555)
+ ++.+...+|.++.+|+.++|.++ ++.....+|.++.+|+.+++..| ++......|. .+|+.+++..+
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 5 66566678888888999888754 66566678888888999988776 6644444554 67888887654
No 367
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.75 E-value=1.7e-09 Score=116.87 Aligned_cols=83 Identities=25% Similarity=0.399 Sum_probs=71.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC-ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEc------CCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG-LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWG------PREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~------~~~~~~~lv 541 (555)
.+.||+|+||.||+|.. .+|+.||||.+... .....+.|.+|+.++.+++||||+++++++.. .+. .++|
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~--~~LV 96 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL--PLLA 96 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS--CCCE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe--EEEE
Confidence 78999999999999997 57899999998654 33446779999999999999999999998754 334 7999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+++|+|.+++
T Consensus 97 mEy~~ggsL~~~L 109 (676)
T 3qa8_A 97 MEYCEGGDLRKYL 109 (676)
T ss_dssp EECCSSCBHHHHH
T ss_pred EEeCCCCCHHHHH
Confidence 9999999998876
No 368
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.75 E-value=1.6e-08 Score=102.04 Aligned_cols=84 Identities=19% Similarity=0.253 Sum_probs=69.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|+.+++.++||||+++++++..... ...++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 67899999999999997 579999999996532 2335778999999999999999999999976543 1249999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||++ |+|.+++
T Consensus 109 e~~~-~~l~~~~ 119 (353)
T 3coi_A 109 PFMQ-TDLQKIM 119 (353)
T ss_dssp ECCS-EEGGGTT
T ss_pred cccc-CCHHHHh
Confidence 9998 5887654
No 369
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.74 E-value=6e-09 Score=105.78 Aligned_cols=84 Identities=21% Similarity=0.297 Sum_probs=63.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC----CceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR----EQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~----~~~~~lv~ 542 (555)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++.... ....++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 67899999999999986 67999999999653 2334677899999999999999999999986541 12379999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+ +|+|.+++
T Consensus 114 e~~-~~~L~~~~ 124 (367)
T 2fst_X 114 HLM-GADLNNIV 124 (367)
T ss_dssp ECC-CEECC---
T ss_pred ccc-CCCHHHHH
Confidence 999 67887765
No 370
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.74 E-value=8.5e-09 Score=103.91 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=67.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCC------CceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPR------EQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~------~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+.++..++||||+++++++.... ....++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 67899999999999997 6899999999854332 23567889999999999999999999987632 123899
Q ss_pred EEeccCCCChhhh
Q 048796 541 LADYIQGDSLALH 553 (555)
Q Consensus 541 v~e~~~~GsL~~~ 553 (555)
||||+++ +|.+.
T Consensus 102 v~e~~~~-~l~~~ 113 (351)
T 3mi9_A 102 VFDFCEH-DLAGL 113 (351)
T ss_dssp EEECCSE-EHHHH
T ss_pred EEeccCC-CHHHH
Confidence 9999986 56554
No 371
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.73 E-value=1.2e-08 Score=106.09 Aligned_cols=79 Identities=19% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +||||+++++++...+. .++|||||+ |
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~--~~lv~E~~~-g 93 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRF--LYIALELCN-L 93 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE--EEEEECCCS-E
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCe--EEEEEecCC-C
Confidence 5689999999997666568999999998653 235678999999876 89999999999987766 999999996 6
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 94 sL~~~l 99 (434)
T 2rio_A 94 NLQDLV 99 (434)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 998876
No 372
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.72 E-value=1.3e-08 Score=101.80 Aligned_cols=81 Identities=27% Similarity=0.358 Sum_probs=62.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHH--HHcCCCCcceeeeEEEEc---CCCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKK--IGSMRHPNIVPLRAYYWG---PREQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~--l~~l~H~niv~l~g~~~~---~~~~~~~lv~e~ 544 (555)
.+.||+|+||.||+|+. +++.||||.+.... ...+..|..+ +..++||||+++++++.. .+....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 67899999999999988 78999999986433 3444444444 456899999999986532 222236899999
Q ss_pred cCCCChhhhh
Q 048796 545 IQGDSLALHL 554 (555)
Q Consensus 545 ~~~GsL~~~l 554 (555)
+++|+|.+++
T Consensus 94 ~~~g~L~~~l 103 (336)
T 3g2f_A 94 YPNGSLXKYL 103 (336)
T ss_dssp CTTCBHHHHH
T ss_pred CCCCcHHHHH
Confidence 9999999876
No 373
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.72 E-value=3.3e-09 Score=104.99 Aligned_cols=83 Identities=16% Similarity=0.256 Sum_probs=64.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh------cHHHHHHHHHHHHcC----CCCcceeeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR------HKKEFAKEVKKIGSM----RHPNIVPLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~ei~~l~~l----~H~niv~l~g~~~~~~~~~~ 538 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ....+.+|+.++.++ +||||+++++++...+. .
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~--~ 113 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEG--F 113 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-------C
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCe--E
Confidence 67899999999999987 67899999999654321 223466788888888 89999999999987766 8
Q ss_pred EEEEec-cCCCChhhhh
Q 048796 539 LLLADY-IQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~-~~~GsL~~~l 554 (555)
++|+|| +++|+|.+++
T Consensus 114 ~~v~e~~~~~~~L~~~l 130 (312)
T 2iwi_A 114 MLVLERPLPAQDLFDYI 130 (312)
T ss_dssp EEEEECCSSEEEHHHHH
T ss_pred EEEEEecCCCCCHHHHH
Confidence 999999 8899998875
No 374
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.71 E-value=2.8e-09 Score=105.75 Aligned_cols=82 Identities=18% Similarity=0.359 Sum_probs=69.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCC--hhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGL--VRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+... .+|+|.+.... ....+.|.+|+.++.+++||||+++++++...+. .++|+||+++
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~iv~e~~~~ 113 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH--LAIITSLCKG 113 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC--EEEECBCCCS
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc--eEEEeecccC
Confidence 7899999999999999843 49999986432 2234568889999999999999999999998777 9999999999
Q ss_pred CChhhhhC
Q 048796 548 DSLALHLY 555 (555)
Q Consensus 548 GsL~~~l~ 555 (555)
|+|.+++.
T Consensus 114 ~~L~~~l~ 121 (319)
T 2y4i_B 114 RTLYSVVR 121 (319)
T ss_dssp EEHHHHTT
T ss_pred CcHHHHHH
Confidence 99998763
No 375
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.71 E-value=1.5e-08 Score=108.18 Aligned_cols=83 Identities=11% Similarity=0.123 Sum_probs=61.3
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--------hcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--------RHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv 541 (555)
.++||+|+||.||+|.+ .+..+++|+...... ...+.|.+|+.++++++||||+++..++...+. .++|
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~--~~lV 417 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN--KRIM 417 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT--TEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc--cEEE
Confidence 57899999999999976 678899998643211 113558999999999999999977777666666 8999
Q ss_pred EeccCCCChhhhhC
Q 048796 542 ADYIQGDSLALHLY 555 (555)
Q Consensus 542 ~e~~~~GsL~~~l~ 555 (555)
|||+++|+|.++++
T Consensus 418 mE~~~ggsL~~~l~ 431 (540)
T 3en9_A 418 MSYINGKLAKDVIE 431 (540)
T ss_dssp EECCCSEEHHHHST
T ss_pred EECCCCCCHHHHHH
Confidence 99999999998864
No 376
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.71 E-value=1.4e-08 Score=99.59 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=69.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|+..+..+ +|+|++++++++..... .++||||+ +
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~--~~lv~e~~-~ 89 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH--NVLVIDLL-G 89 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE--EEEEEECC-C
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce--eEEEEEec-C
Confidence 67899999999999996 689999999986432 234688899999999 79999999999987766 99999999 9
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 90 ~~L~~~l 96 (298)
T 1csn_A 90 PSLEDLL 96 (298)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
No 377
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.70 E-value=5.6e-09 Score=105.32 Aligned_cols=77 Identities=19% Similarity=0.205 Sum_probs=63.5
Q ss_pred CCeeecCCceEEEEEEeC---------CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCccee---------------
Q 048796 470 AEVLGRSSHGTLYKATLD---------SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVP--------------- 525 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~--------------- 525 (555)
.+.||+|+||.||+|+.. +++.||||.+... +.+.+|+.++.+++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 779999999999999974 3789999998653 45789999999999999998
Q ss_pred eeEEEEc-CCCceEEEEEeccCCCChhhhh
Q 048796 526 LRAYYWG-PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 526 l~g~~~~-~~~~~~~lv~e~~~~GsL~~~l 554 (555)
+++++.. ... .++||||+ +|+|.+++
T Consensus 122 ~~~~~~~~~~~--~~lv~e~~-~~~L~~~l 148 (352)
T 2jii_A 122 CMGFGVHQDKY--RFLVLPSL-GRSLQSAL 148 (352)
T ss_dssp CCEEEEETTTE--EEEEEECC-CEEHHHHH
T ss_pred hhhccccCCcE--EEEEecCC-CcCHHHHH
Confidence 6777765 344 89999999 99999876
No 378
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.69 E-value=9.2e-09 Score=103.46 Aligned_cols=82 Identities=16% Similarity=0.060 Sum_probs=61.6
Q ss_pred CCeeecCCceEEEEEEeC----CCCEEEEEEeccCChh-----------cHHHHHHHHHHHHcCCCCcceeeeEEEEc--
Q 048796 470 AEVLGRSSHGTLYKATLD----SGHMLTVKWLRVGLVR-----------HKKEFAKEVKKIGSMRHPNIVPLRAYYWG-- 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~ei~~l~~l~H~niv~l~g~~~~-- 532 (555)
.+.||+|+||.||+|+.. .+..+|||.+...... ..+.+.+|+..+..++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 779999999999999973 6788999998654321 12457788899999999999999999876
Q ss_pred --CCCceEEEEEeccCCCChhhhh
Q 048796 533 --PREQERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 --~~~~~~~lv~e~~~~GsL~~~l 554 (555)
... .++||||+ +|+|.+++
T Consensus 122 ~~~~~--~~lv~e~~-~~~L~~~l 142 (345)
T 2v62_A 122 KGRSY--RFMVMERL-GIDLQKIS 142 (345)
T ss_dssp SSCEE--EEEEEECE-EEEHHHHC
T ss_pred CCCcE--EEEEEecc-CCCHHHHH
Confidence 344 89999999 99999876
No 379
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.69 E-value=1.5e-08 Score=100.14 Aligned_cols=84 Identities=27% Similarity=0.351 Sum_probs=65.2
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCC-----hhcHHHHHHHHHHHHcC---CCCcceeeeEEEEcCCCc---e
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGL-----VRHKKEFAKEVKKIGSM---RHPNIVPLRAYYWGPREQ---E 537 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~ei~~l~~l---~H~niv~l~g~~~~~~~~---~ 537 (555)
.+.||+|+||.||+|+. .+|+.||||.+.... ......+.+|+.+++++ +||||++++++|...... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 67899999999999996 679999999985322 11235677788777666 499999999999765421 2
Q ss_pred EEEEEeccCCCChhhhh
Q 048796 538 RLLLADYIQGDSLALHL 554 (555)
Q Consensus 538 ~~lv~e~~~~GsL~~~l 554 (555)
.++||||++ |+|.+++
T Consensus 94 ~~lv~e~~~-~~L~~~~ 109 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYL 109 (308)
T ss_dssp EEEEEECCC-CBHHHHH
T ss_pred EEEEehhhh-cCHHHHH
Confidence 789999998 5888765
No 380
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.68 E-value=3.4e-08 Score=98.89 Aligned_cols=81 Identities=19% Similarity=0.231 Sum_probs=61.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC--CCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP--REQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~e~~~ 546 (555)
.++||+|+||.||+|+. .+|+.||||.+.... +........+..++||||+++++++... +....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 35799999999999998 579999999986532 1122222346678999999999998652 1223799999999
Q ss_pred CCChhhhh
Q 048796 547 GDSLALHL 554 (555)
Q Consensus 547 ~GsL~~~l 554 (555)
+|+|.+++
T Consensus 110 gg~L~~~l 117 (336)
T 3fhr_A 110 GGELFSRI 117 (336)
T ss_dssp TEEHHHHH
T ss_pred CCCHHHHH
Confidence 99998876
No 381
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.67 E-value=3.3e-08 Score=97.79 Aligned_cols=82 Identities=10% Similarity=0.227 Sum_probs=70.4
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccC--ChhcHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVG--LVRHKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.||+|+||.||+++..+++.||||.+... .....+.+.+|+.++.+++ |+||+++++++...+. .++||| +
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~--~~lv~e-~ 109 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVME-C 109 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE--EEEEEC-C
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE--EEEEEe-c
Confidence 6789999999999999878999999998643 2334678999999999997 5999999999988776 999999 6
Q ss_pred CCCChhhhh
Q 048796 546 QGDSLALHL 554 (555)
Q Consensus 546 ~~GsL~~~l 554 (555)
.+|+|.+++
T Consensus 110 ~~~~L~~~l 118 (313)
T 3cek_A 110 GNIDLNSWL 118 (313)
T ss_dssp CSEEHHHHH
T ss_pred CCCcHHHHH
Confidence 678998875
No 382
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.67 E-value=1.4e-08 Score=102.91 Aligned_cols=84 Identities=15% Similarity=0.147 Sum_probs=63.9
Q ss_pred CCeeecCCceEEEEEEeCC------CCEEEEEEeccCChh-----------cHHHHHHHHHHHHcCCCCcceeeeEEEEc
Q 048796 470 AEVLGRSSHGTLYKATLDS------GHMLTVKWLRVGLVR-----------HKKEFAKEVKKIGSMRHPNIVPLRAYYWG 532 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~------g~~vavK~l~~~~~~-----------~~~~~~~ei~~l~~l~H~niv~l~g~~~~ 532 (555)
.+.||+|+||.||+|++.. ++.||||.+...... ....+..|+..+..++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 7799999999999998743 478999998654321 12335566777888999999999999875
Q ss_pred CCC--ceEEEEEeccCCCChhhhh
Q 048796 533 PRE--QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 533 ~~~--~~~~lv~e~~~~GsL~~~l 554 (555)
... ...++||||+ +|+|.+++
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~ 142 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIY 142 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHH
T ss_pred ccCCcceEEEEEeCC-CCCHHHHH
Confidence 321 2379999999 99998876
No 383
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.65 E-value=1.8e-08 Score=104.60 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=64.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.++||+|+||.||.....+|+.||||++..... ..+.+|+.++..+ +|||||++++++..... .++|||||+ |
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~--~~lv~E~~~-g 102 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQF--QYIAIELCA-A 102 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTE--EEEEEECCS-E
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCE--EEEEEECCC-C
Confidence 679999999986544445899999999965432 2356899999999 79999999999987776 999999997 5
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 103 ~L~~~l 108 (432)
T 3p23_A 103 TLQEYV 108 (432)
T ss_dssp EHHHHH
T ss_pred CHHHHH
Confidence 888775
No 384
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.65 E-value=1.7e-08 Score=100.45 Aligned_cols=84 Identities=24% Similarity=0.332 Sum_probs=63.7
Q ss_pred CCeeecCCceEEEEEEe--CCCCEEEEEEeccCCh--hcHHHHHHHHHHHHcC---CCCcceeeeEEEEc---CCCceEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGHMLTVKWLRVGLV--RHKKEFAKEVKKIGSM---RHPNIVPLRAYYWG---PREQERL 539 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~~vavK~l~~~~~--~~~~~~~~ei~~l~~l---~H~niv~l~g~~~~---~~~~~~~ 539 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .....+.+|+.+++.+ +||||++++++|.. ......+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 67899999999999997 4688999999854321 2234566777766655 89999999999862 1222389
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
+||||++ |+|.+++
T Consensus 96 lv~e~~~-~~L~~~l 109 (326)
T 1blx_A 96 LVFEHVD-QDLTTYL 109 (326)
T ss_dssp EEEECCS-CBHHHHH
T ss_pred EEEecCC-CCHHHHH
Confidence 9999998 5898765
No 385
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.63 E-value=4.7e-08 Score=96.76 Aligned_cols=79 Identities=18% Similarity=0.280 Sum_probs=56.5
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh-hc-HHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV-RH-KKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~-~~-~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .. .+.+..+..++..++||||+++++++...+. .++||||+
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~--~~lv~e~~- 106 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD--VFIAMELM- 106 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE--EEEEECCC-
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCc--EEEEEecc-
Confidence 67899999999999998 5799999999965432 22 2334455567888999999999999988776 99999999
Q ss_pred CCChh
Q 048796 547 GDSLA 551 (555)
Q Consensus 547 ~GsL~ 551 (555)
++.+.
T Consensus 107 ~~~~~ 111 (318)
T 2dyl_A 107 GTCAE 111 (318)
T ss_dssp SEEHH
T ss_pred CCcHH
Confidence 33443
No 386
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.63 E-value=5.6e-08 Score=98.70 Aligned_cols=83 Identities=13% Similarity=0.103 Sum_probs=55.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHH---HHHHcCCCCcceeee-------EEEEcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEV---KKIGSMRHPNIVPLR-------AYYWGPRE 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei---~~l~~l~H~niv~l~-------g~~~~~~~ 535 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+ ..++. +||||++++ +++.....
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 67899999999999997 5789999999976432 2355677784 55666 799988754 44432221
Q ss_pred ---------------ceEEEEEeccCCCChhhhh
Q 048796 536 ---------------QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ---------------~~~~lv~e~~~~GsL~~~l 554 (555)
...++|||||+ |+|.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l 178 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLF 178 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHH
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHH
Confidence 23799999999 8999876
No 387
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.61 E-value=4.6e-08 Score=101.44 Aligned_cols=81 Identities=16% Similarity=0.225 Sum_probs=66.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcC------CCCcceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSM------RHPNIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l------~H~niv~l~g~~~~~~~~~~~lv~ 542 (555)
.++||+|+||.||+|+. .+++.||||.+.... ...+.+.+|+.++..+ .|+||+++++++..... .++||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~--~~lv~ 178 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH--ICMTF 178 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE--EEEEE
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe--EEEEE
Confidence 67899999999999987 568999999997542 2346677888887766 67799999999987776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||+. |+|.+++
T Consensus 179 e~~~-~~L~~~l 189 (429)
T 3kvw_A 179 ELLS-MNLYELI 189 (429)
T ss_dssp CCCC-CBHHHHH
T ss_pred eccC-CCHHHHH
Confidence 9997 5888765
No 388
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.60 E-value=3.1e-08 Score=101.31 Aligned_cols=83 Identities=13% Similarity=0.175 Sum_probs=65.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC--------CCcceeeeEEEEcC--CCceE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR--------HPNIVPLRAYYWGP--REQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~--------H~niv~l~g~~~~~--~~~~~ 538 (555)
.+.||+|+||.||+|+. .+++.||||.+... ....+.+.+|+.++..++ |+||+++++++... .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 67899999999999986 67889999999753 234577899999999886 78899999998721 12238
Q ss_pred EEEEeccCCCChhhhh
Q 048796 539 LLLADYIQGDSLALHL 554 (555)
Q Consensus 539 ~lv~e~~~~GsL~~~l 554 (555)
++||||+ +|+|.+++
T Consensus 121 ~lv~e~~-~~~l~~~~ 135 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWI 135 (397)
T ss_dssp EEEECCC-CCBHHHHH
T ss_pred EEEEecc-CccHHHHH
Confidence 9999999 55665543
No 389
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.60 E-value=7.5e-08 Score=99.53 Aligned_cols=78 Identities=28% Similarity=0.465 Sum_probs=61.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcC----CCceEEEEEec
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGP----REQERLLLADY 544 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~----~~~~~~lv~e~ 544 (555)
.++||+|+||.||+|+. .+|+.||||++..... .+.+|+.+++.++|||||+++++|... +....++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 67899999999999998 5799999999864322 234799999999999999999988532 11126789999
Q ss_pred cCCCChhh
Q 048796 545 IQGDSLAL 552 (555)
Q Consensus 545 ~~~GsL~~ 552 (555)
+++ +|.+
T Consensus 135 ~~~-~l~~ 141 (420)
T 1j1b_A 135 VPE-TVYR 141 (420)
T ss_dssp CCE-EHHH
T ss_pred ccc-cHHH
Confidence 986 4544
No 390
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.58 E-value=7.9e-07 Score=90.97 Aligned_cols=220 Identities=12% Similarity=0.174 Sum_probs=105.4
Q ss_pred CCCEEECCCCcCCCCCCCCC---CCCCEEEcCCCc---CCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEE
Q 048796 9 TLSVLNLSSNSLSGTLPTSL---KSCVILDLSRNM---ISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTF 82 (555)
Q Consensus 9 ~L~~L~Ls~N~l~~~~~~~l---~~L~~L~L~~N~---l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 82 (555)
.|+.+.+..+ ++.+-..+| .+|+.+.+..|. ++.+...+|..+.+|+.+.+..+ ++.....+|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4777777644 443323333 456677776553 44444556666666666655544 333444455666666666
Q ss_pred EeeCCcCCCCCchhccCCCCccEEEcCCCcCCC----------------------CCchhhhCCCCCCeEEccCCcccc-
Q 048796 83 NIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKG----------------------PIPDNFFSSMALTNLNLSGNGFSG- 139 (555)
Q Consensus 83 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~----------------------~~~~~~~~~~~L~~L~Ls~N~l~~- 139 (555)
.+..+ +.......|..+.+|+.+.+..+ ++. .....|..+.+|.......+....
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~ 220 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAI 220 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBS
T ss_pred cccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhhhccccceecccccccccc
Confidence 66533 22233344555555555555433 211 112223333333333222211100
Q ss_pred ---------------------------cCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccc
Q 048796 140 ---------------------------AIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANN 192 (555)
Q Consensus 140 ---------------------------~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 192 (555)
.+|..+... .-..+..+..|+.+.+..+..+ ....+|.++..|+.+.+. +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i-~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~ 297 (394)
T 4gt6_A 221 DNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARI-ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-S 297 (394)
T ss_dssp SSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEE-CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-T
T ss_pred cceeecccccccccccccccccccceEEcCCcceEc-ccceeeecccccEEecccccce-ecCcccccccccccccCC-C
Confidence 011111000 1113445566777776554332 444566666666666664 3
Q ss_pred cccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEec
Q 048796 193 HLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVS 236 (555)
Q Consensus 193 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls 236 (555)
.++.....+|.++.+|+.++|..+ ++......|. .+|+.+.|.
T Consensus 298 ~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 298 RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 344444556666666666666543 4423333333 456666664
No 391
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.58 E-value=3.7e-08 Score=99.48 Aligned_cols=78 Identities=18% Similarity=0.348 Sum_probs=52.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC-----ceEEEEEe
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE-----QERLLLAD 543 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~-----~~~~lv~e 543 (555)
.+.||+|+||.||+|+. .+|+.||||++..... ....+.+|+..++.++||||+++++++...+. ...++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 78999999999999997 5799999998854322 23456778888999999999999999864321 12689999
Q ss_pred ccCCC
Q 048796 544 YIQGD 548 (555)
Q Consensus 544 ~~~~G 548 (555)
|++++
T Consensus 107 ~~~~~ 111 (360)
T 3e3p_A 107 YVPDT 111 (360)
T ss_dssp CCSCB
T ss_pred ccccc
Confidence 99975
No 392
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.58 E-value=7.8e-07 Score=91.02 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=65.5
Q ss_pred hhhhCCCCCCeEEccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCC
Q 048796 119 DNFFSSMALTNLNLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKM 198 (555)
Q Consensus 119 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 198 (555)
.+|..+..|+.+.+..+... .....|..+ ..|+.+.+. +.++.+...+|.+|.+|+.++|..+ ++...
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c---------~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 326 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNC---------PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQIL 326 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTC---------TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEEC
T ss_pred ceeeecccccEEecccccce-ecCcccccc---------cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEeh
Confidence 35666777777777655332 223333333 677777775 4455555667777777777777654 55455
Q ss_pred chhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEeccCC
Q 048796 199 PSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNVSYND 239 (555)
Q Consensus 199 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~ls~N~ 239 (555)
..+|.++.+|+.+.+..+ ++......|. .+|+.+++.+|.
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 567777777777777544 5533334444 567777777664
No 393
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.57 E-value=7e-08 Score=94.39 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=66.8
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+|+.||||.+..... .+.+.+|+.++..++|+++++.+.++...+. ..++||||+ +|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e~~-~~ 89 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL-GP 89 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEECC-CC
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEEEec-CC
Confidence 67899999999999996 6899999999865432 3468899999999999998887777654332 389999999 89
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 90 ~L~~~~ 95 (296)
T 3uzp_A 90 SLEDLF 95 (296)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998875
No 394
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.56 E-value=4.1e-08 Score=97.91 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=67.8
Q ss_pred CCeeecCCceEEEEEEe--CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCc------ceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL--DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPN------IVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~n------iv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .+|+.||||.++... ...+.+.+|+.++..++|++ ++++++++...+. .++|
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~--~~lv 95 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH--ICIV 95 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE--EEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc--EEEE
Confidence 67899999999999986 468899999996532 34567889999988887654 9999999987776 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+ +|+|.+++
T Consensus 96 ~e~~-~~~l~~~l 107 (339)
T 1z57_A 96 FELL-GLSTYDFI 107 (339)
T ss_dssp EECC-CCBHHHHH
T ss_pred EcCC-CCCHHHHH
Confidence 9999 88998775
No 395
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.55 E-value=6.1e-09 Score=94.82 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=18.6
Q ss_pred cCccccceeec--ccccccCC----CchhccCCCCCCEEeCCCCcCC
Q 048796 179 GNMGRLRLLNL--ANNHLSGK----MPSELSKLGALEYLDLSGNQFK 219 (555)
Q Consensus 179 ~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 219 (555)
...++|+.|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 118 ~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 118 QSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 33444555555 44555432 1222333455555555555543
No 396
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.52 E-value=2.7e-08 Score=98.91 Aligned_cols=83 Identities=13% Similarity=0.259 Sum_probs=68.7
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChh------cHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCCceEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVR------HKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~~~~~l 540 (555)
.+.||+|+||.||+|+. .+|+.||||.+...... ..+.+.+|+.++.+++ |+||+++++++...+. .++
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~--~~l 125 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS--FVL 125 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE--EEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc--EEE
Confidence 67899999999999986 67899999998643221 2245778999999986 5999999999998776 999
Q ss_pred EEeccCC-CChhhhh
Q 048796 541 LADYIQG-DSLALHL 554 (555)
Q Consensus 541 v~e~~~~-GsL~~~l 554 (555)
|+||+.+ |+|.+++
T Consensus 126 v~e~~~~~~~L~~~l 140 (320)
T 3a99_A 126 ILERPEPVQDLFDFI 140 (320)
T ss_dssp EEECCSSEEEHHHHH
T ss_pred EEEcCCCCccHHHHH
Confidence 9999986 8888765
No 397
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=2.1e-08 Score=91.18 Aligned_cols=118 Identities=16% Similarity=0.259 Sum_probs=59.3
Q ss_pred ccCCCCccEEEccCC-cCCC----CCCccccCCCCccEEEeeCCcCCCC----CchhccCCCCccEEEcCCCcCCCC---
Q 048796 49 QNWEANLEILDLSSN-KLSG----SLPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQLKGP--- 116 (555)
Q Consensus 49 ~~~~~~L~~L~Ls~N-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~--- 116 (555)
+...++|++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334445666666665 5542 1223344455566666666665532 223344445666666666666522
Q ss_pred -CchhhhCCCCCCeEEc--cCCcccccCCcCccccccccccCCCCCcCEEEccCCcCC
Q 048796 117 -IPDNFFSSMALTNLNL--SGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALT 171 (555)
Q Consensus 117 -~~~~~~~~~~L~~L~L--s~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~ 171 (555)
+...+.....|+.|+| ++|.|.......+... +...++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~-----L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANM-----LEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHH-----HHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHH-----HHhCCCcCEEeccCCCCC
Confidence 2334455556666666 5566653322111111 222356667777766664
No 398
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.51 E-value=8.5e-08 Score=98.24 Aligned_cols=77 Identities=21% Similarity=0.398 Sum_probs=60.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCC----ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPRE----QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~----~~~~lv~e~~ 545 (555)
.++||+|+||.||+|+...+..+|+|++..... ...+|+.+++.++||||+++++++..... ...++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 679999999999999986666799998854322 12369999999999999999999854321 1267999999
Q ss_pred CCCCh
Q 048796 546 QGDSL 550 (555)
Q Consensus 546 ~~GsL 550 (555)
+++.+
T Consensus 121 ~~~l~ 125 (394)
T 4e7w_A 121 PETVY 125 (394)
T ss_dssp SEEHH
T ss_pred CccHH
Confidence 97533
No 399
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.49 E-value=5.5e-08 Score=98.61 Aligned_cols=83 Identities=14% Similarity=0.174 Sum_probs=68.0
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-----------CCcceeeeEEEEcCC--C
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-----------HPNIVPLRAYYWGPR--E 535 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-----------H~niv~l~g~~~~~~--~ 535 (555)
.+.||+|+||.||+|+. .+++.||||.+.... ...+.+.+|+.++.+++ |+||+++++++...+ .
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 67899999999999997 678999999997432 34567889999988876 899999999987543 1
Q ss_pred ceEEEEEeccCCCChhhhh
Q 048796 536 QERLLLADYIQGDSLALHL 554 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~~~l 554 (555)
...++||||+ +|+|.+++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~ 120 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALI 120 (373)
T ss_dssp EEEEEEECCC-CEEHHHHH
T ss_pred ceEEEEEecC-CCCHHHHH
Confidence 1389999999 88998765
No 400
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.49 E-value=1.6e-07 Score=91.56 Aligned_cols=77 Identities=13% Similarity=0.225 Sum_probs=60.8
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh------------------hcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV------------------RHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
.+.||+|+||.||+|+..+|+.||||.++.... .....+.+|+.++.+++| +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCeEEe
Confidence 478999999999999997799999999964321 124578999999999994 55665544
Q ss_pred cCCCceEEEEEeccCCCChhh
Q 048796 532 GPREQERLLLADYIQGDSLAL 552 (555)
Q Consensus 532 ~~~~~~~~lv~e~~~~GsL~~ 552 (555)
. +. .++||||+++|+|.+
T Consensus 172 ~-~~--~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 172 W-EG--NAVLMELIDAKELYR 189 (282)
T ss_dssp E-ET--TEEEEECCCCEEGGG
T ss_pred c-cc--eEEEEEecCCCcHHH
Confidence 3 34 799999999999987
No 401
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.49 E-value=1.2e-07 Score=92.77 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=64.9
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcceeeeEEEEcCCCceEEEEEeccCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIQGD 548 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~l~g~~~~~~~~~~~lv~e~~~~G 548 (555)
.+.||+|+||.||+|+. .+++.||||.+..... .+.+.+|+.++..++|++++..+++|...+. ..++||||+ +|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~e~~-~~ 89 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVMELL-GP 89 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEEECC-CC
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEEEEEcc-CC
Confidence 67899999999999996 6789999998754322 2457889999999999998888877754332 389999999 99
Q ss_pred Chhhhh
Q 048796 549 SLALHL 554 (555)
Q Consensus 549 sL~~~l 554 (555)
+|.+++
T Consensus 90 ~L~~~~ 95 (296)
T 4hgt_A 90 SLEDLF 95 (296)
T ss_dssp BHHHHH
T ss_pred CHHHHH
Confidence 998875
No 402
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.47 E-value=2.6e-07 Score=97.00 Aligned_cols=80 Identities=20% Similarity=0.249 Sum_probs=63.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCccee-eeEEEEcCCCceEEEEEeccCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIVP-LRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv~-l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
.++||+|+||.||+|+. .+++.||||.+..... .+++.+|+.++..++|++.+. +..++...+. .++||||+ +
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~--~~lvme~~-g 86 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDY--NVLVMDLL-G 86 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTE--EEEEEECC-C
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCE--EEEEEECC-C
Confidence 78999999999999997 6799999998764332 245889999999998865554 4444455554 89999999 9
Q ss_pred CChhhhh
Q 048796 548 DSLALHL 554 (555)
Q Consensus 548 GsL~~~l 554 (555)
|+|.+++
T Consensus 87 ~sL~~ll 93 (483)
T 3sv0_A 87 PSLEDLF 93 (483)
T ss_dssp CBHHHHH
T ss_pred CCHHHHH
Confidence 9999876
No 403
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.47 E-value=9.2e-07 Score=90.48 Aligned_cols=193 Identities=13% Similarity=0.052 Sum_probs=134.2
Q ss_pred cCCCCCCEEECCCCcCCCCCCC---CCCCCCEEEcCCCcCCCCCcccccCCCC----------------------ccEEE
Q 048796 5 INSTTLSVLNLSSNSLSGTLPT---SLKSCVILDLSRNMISGDISDMQNWEAN----------------------LEILD 59 (555)
Q Consensus 5 ~n~~~L~~L~Ls~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~----------------------L~~L~ 59 (555)
.+|++|+.+.+..+..+ .-.. ...+|+.+++..| ++.+....|..... |+.+.
T Consensus 159 ~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ 236 (394)
T 4fs7_A 159 ATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNII 236 (394)
T ss_dssp TTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEE
T ss_pred cccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEE
Confidence 46788999999765322 2222 3345677777655 44333444444444 44444
Q ss_pred ccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeEEccCCcccc
Q 048796 60 LSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNLNLSGNGFSG 139 (555)
Q Consensus 60 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~ 139 (555)
+..+ ++......|.++..|+.+.+..+... .....|..+..++.+.+..+.+. ...|..+.+|+.+.+..+ +..
T Consensus 237 ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~ 310 (394)
T 4fs7_A 237 IPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKF 310 (394)
T ss_dssp ECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCE
T ss_pred ECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cce
Confidence 4332 22234456778889999999887654 66678889999999988876543 346778899999999765 554
Q ss_pred cCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCC
Q 048796 140 AIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGN 216 (555)
Q Consensus 140 ~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 216 (555)
....+|..+ .+|+.++|..+ ++.+...+|.+|.+|+.+++..| ++.....+|.++++|+.+++..+
T Consensus 311 I~~~aF~~c---------~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 311 IGEEAFESC---------TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECTTTTTTC---------TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred echhhhcCC---------CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 444555554 88999999754 77677788999999999999877 77667788999999999998654
No 404
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.43 E-value=2.1e-07 Score=94.91 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=66.1
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CC-----cceeeeEEEEcCCCceEEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HP-----NIVPLRAYYWGPREQERLLLA 542 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~-----niv~l~g~~~~~~~~~~~lv~ 542 (555)
.+.||+|+||.||+|+. .+++.||||.++... ....++..|+.++..++ |+ +|+++++++...+. .++||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~--~~lv~ 135 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH--LCLVF 135 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE--EEEEE
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc--eEEEE
Confidence 67899999999999997 578899999997432 23566788888888775 44 49999999987776 99999
Q ss_pred eccCCCChhhhh
Q 048796 543 DYIQGDSLALHL 554 (555)
Q Consensus 543 e~~~~GsL~~~l 554 (555)
||++ |+|.+++
T Consensus 136 e~~~-~~L~~~l 146 (382)
T 2vx3_A 136 EMLS-YNLYDLL 146 (382)
T ss_dssp ECCC-CBHHHHH
T ss_pred ecCC-CCHHHHH
Confidence 9996 4888775
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.39 E-value=1.1e-05 Score=81.79 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=35.0
Q ss_pred CCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCEEeCCCCcCCCCCChhhh--cCCCEEEe
Q 048796 158 PPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEYLDLSGNQFKGEIPDKLS--LKLNEFNV 235 (555)
Q Consensus 158 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~L~~L~l 235 (555)
..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +.......|.++.+|+.+++.++.++......|. .+|+.++|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 44555555443 33333444555555555555432 3323334445555555555555544433333333 34555544
Q ss_pred c
Q 048796 236 S 236 (555)
Q Consensus 236 s 236 (555)
.
T Consensus 318 p 318 (379)
T 4h09_A 318 P 318 (379)
T ss_dssp C
T ss_pred C
Confidence 3
No 406
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.37 E-value=2.9e-07 Score=92.46 Aligned_cols=81 Identities=12% Similarity=0.183 Sum_probs=65.4
Q ss_pred CCeeecCCceEEEEEEe-CCC-CEEEEEEeccCChhcHHHHHHHHHHHHcCCCCc------ceeeeEEEEcCCCceEEEE
Q 048796 470 AEVLGRSSHGTLYKATL-DSG-HMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPN------IVPLRAYYWGPREQERLLL 541 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g-~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~n------iv~l~g~~~~~~~~~~~lv 541 (555)
.+.||+|+||.||+|+. .++ +.||||.++... ...+.+.+|+.++..++|++ ++.+.+++...+. .++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~--~~lv 100 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH--MCIA 100 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE--EEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe--EEEE
Confidence 67899999999999997 344 689999997532 34567889999999888766 8999999887776 9999
Q ss_pred EeccCCCChhhhh
Q 048796 542 ADYIQGDSLALHL 554 (555)
Q Consensus 542 ~e~~~~GsL~~~l 554 (555)
|||+ +|+|.+++
T Consensus 101 ~e~~-~~~l~~~l 112 (355)
T 2eu9_A 101 FELL-GKNTFEFL 112 (355)
T ss_dssp EECC-CCBHHHHH
T ss_pred Eecc-CCChHHHH
Confidence 9999 55666553
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.28 E-value=1.1e-07 Score=91.09 Aligned_cols=30 Identities=27% Similarity=0.275 Sum_probs=15.9
Q ss_pred ccceeecccccccCCCc-------hhccCCCCCCEEe
Q 048796 183 RLRLLNLANNHLSGKMP-------SELSKLGALEYLD 212 (555)
Q Consensus 183 ~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~ 212 (555)
+|+.|+|++|.+.+..| ..+..+++|+.||
T Consensus 221 ~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 221 KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 55555555555554333 2344566666665
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.28 E-value=1e-07 Score=91.34 Aligned_cols=76 Identities=34% Similarity=0.457 Sum_probs=54.4
Q ss_pred CCCcCEEEccCCcCCCc--CCccccCccccceeecccccccCCCchhccCCC--CCCEEeCCCCcCCCCCChh-------
Q 048796 157 YPPMESLDLSGNALTGV--LPSDIGNMGRLRLLNLANNHLSGKMPSELSKLG--ALEYLDLSGNQFKGEIPDK------- 225 (555)
Q Consensus 157 ~~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~------- 225 (555)
+++|+.|+|++|.|++. ++..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+++..|..
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 37788888888888873 345566788888888888888864 2333333 8999999999998766631
Q ss_pred hh--cCCCEEE
Q 048796 226 LS--LKLNEFN 234 (555)
Q Consensus 226 ~~--~~L~~L~ 234 (555)
+. ++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 11 6777764
No 409
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.28 E-value=5e-07 Score=96.86 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=58.3
Q ss_pred eeecCCceEEEEEE-eCCCCEEEEEEeccCC----------hhcHHHHHHHHHHHHcC-CCCcceeeeEEEEcCCCceEE
Q 048796 472 VLGRSSHGTLYKAT-LDSGHMLTVKWLRVGL----------VRHKKEFAKEVKKIGSM-RHPNIVPLRAYYWGPREQERL 539 (555)
Q Consensus 472 ~lG~G~~g~vy~~~-~~~g~~vavK~l~~~~----------~~~~~~~~~ei~~l~~l-~H~niv~l~g~~~~~~~~~~~ 539 (555)
-.+.|+.|.++.++ +-.|+.+|||.+.... ....++|.+|+.+|+++ .|+||+++++++++... .|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~--~y 318 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS--GW 318 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE--EE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE--EE
Confidence 34555555555543 2358899999985421 12356799999999999 79999999999998776 99
Q ss_pred EEEeccCCCChhhhh
Q 048796 540 LLADYIQGDSLALHL 554 (555)
Q Consensus 540 lv~e~~~~GsL~~~l 554 (555)
|||||++||+|.++|
T Consensus 319 LVMEyv~G~~L~d~i 333 (569)
T 4azs_A 319 LVMEKLPGRLLSDML 333 (569)
T ss_dssp EEEECCCSEEHHHHH
T ss_pred EEEecCCCCcHHHHH
Confidence 999999999999986
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.99 E-value=3.7e-05 Score=77.91 Aligned_cols=154 Identities=14% Similarity=0.044 Sum_probs=112.2
Q ss_pred CCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCCCcCCCCCchhhhCCCCCCeE
Q 048796 51 WEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSSNQLKGPIPDNFFSSMALTNL 130 (555)
Q Consensus 51 ~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 130 (555)
....+..+.+..+... .....+....+|+.+.+..+ +.......+..+..|+.+.+..+ ++......|..+.+|+.+
T Consensus 192 ~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i 268 (379)
T 4h09_A 192 AAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTL 268 (379)
T ss_dssp TTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccc
Confidence 3345666666554433 45566777888999888755 44456677888899999999776 554556678888899999
Q ss_pred EccCCcccccCCcCccccccccccCCCCCcCEEEccCCcCCCcCCccccCccccceeecccccccCCCchhccCCCCCCE
Q 048796 131 NLSGNGFSGAIPLRSSHASELLVLPSYPPMESLDLSGNALTGVLPSDIGNMGRLRLLNLANNHLSGKMPSELSKLGALEY 210 (555)
Q Consensus 131 ~Ls~N~l~~~~p~~~~~~~~l~~l~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 210 (555)
.+..+ +.......|..+ .+|+.+.+.++.++.+...+|.+|.+|+.++|..+ ++.....+|.++.+|+.
T Consensus 269 ~l~~~-i~~i~~~aF~~c---------~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 337 (379)
T 4h09_A 269 NFYAK-VKTVPYLLCSGC---------SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALST 337 (379)
T ss_dssp EECCC-CSEECTTTTTTC---------TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCC
T ss_pred ccccc-ceeccccccccc---------cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCE
Confidence 88654 443333344444 88999999988888777888999999999999765 66566678899999999
Q ss_pred EeCCCCcCC
Q 048796 211 LDLSGNQFK 219 (555)
Q Consensus 211 L~Ls~N~l~ 219 (555)
+.+..+ ++
T Consensus 338 i~ip~~-v~ 345 (379)
T 4h09_A 338 ISYPKS-IT 345 (379)
T ss_dssp CCCCTT-CC
T ss_pred EEECCc-cC
Confidence 888654 54
No 411
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.88 E-value=1e-05 Score=77.49 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=52.4
Q ss_pred CCeeecCCceEEEEEEe-CCCCE--EEEEEeccCChh------------------------cHHHHHHHHHHHHcCCCCc
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHM--LTVKWLRVGLVR------------------------HKKEFAKEVKKIGSMRHPN 522 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~~~~ei~~l~~l~H~n 522 (555)
.+.||+|+||.||+|.. .+|+. ||||.++..... ....+.+|+..+.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999998 78999 999987543110 1236889999999998886
Q ss_pred c--eeeeEEEEcCCCceEEEEEeccC
Q 048796 523 I--VPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 523 i--v~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
+ ...+.+ .. .++||||+.
T Consensus 132 i~~p~~~~~----~~--~~lVmE~~g 151 (258)
T 1zth_A 132 VSVPQPYTY----MK--NVLLMEFIG 151 (258)
T ss_dssp CCCCCEEEE----ET--TEEEEECCE
T ss_pred CCCCeEEEc----CC--CEEEEEecC
Confidence 4 333332 23 689999994
No 412
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.84 E-value=6.2e-06 Score=73.28 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=40.7
Q ss_pred CccEEEccCCcCCCCCCccccCCCCccEEEeeCCc-CCCCCchhccCC----CCccEEEcCCCc-CCCCCchhhhCCCCC
Q 048796 54 NLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS-VTGTLPSLLEIS----PRLVTLDVSSNQ-LKGPIPDNFFSSMAL 127 (555)
Q Consensus 54 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l----~~L~~L~L~~N~-l~~~~~~~~~~~~~L 127 (555)
+|+.|||+++.|++.--..+.++++|++|+|++|. |+...-..+..+ ++|++|+|++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 36666666666554433444556666666666653 443322333332 245566665553 443222334445555
Q ss_pred CeEEccCC
Q 048796 128 TNLNLSGN 135 (555)
Q Consensus 128 ~~L~Ls~N 135 (555)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 413
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.70 E-value=8.6e-06 Score=72.37 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=29.8
Q ss_pred CCcCEEEccCCc-CCCcCCccccCc----cccceeeccccc-ccCCCchhccCCCCCCEEeCCCCc
Q 048796 158 PPMESLDLSGNA-LTGVLPSDIGNM----GRLRLLNLANNH-LSGKMPSELSKLGALEYLDLSGNQ 217 (555)
Q Consensus 158 ~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 217 (555)
++|++|+|++|. |++..-..++.+ ++|++|+|++|. |+...-..+..+++|++|+|+++.
T Consensus 85 ~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 85 QYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp SCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 445555555542 443322333332 346666666653 554333445556666666666653
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.67 E-value=1.5e-05 Score=72.18 Aligned_cols=83 Identities=20% Similarity=0.370 Sum_probs=39.9
Q ss_pred CCccEEEccCC-cCCC----CCCccccCCCCccEEEeeCCcCCCC----CchhccCCCCccEEEcCCCcCCCC----Cch
Q 048796 53 ANLEILDLSSN-KLSG----SLPNLTSQFDRLSTFNIRNNSVTGT----LPSLLEISPRLVTLDVSSNQLKGP----IPD 119 (555)
Q Consensus 53 ~~L~~L~Ls~N-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~ 119 (555)
+.|+.|+|++| .|.. .+.+.+..-..|+.|+|++|.|... +...+..-+.|++|+|++|.|... +.+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 34555555553 4432 1223334445555666666555522 223333445566666666665421 122
Q ss_pred hhhCCCCCCeEEccCC
Q 048796 120 NFFSSMALTNLNLSGN 135 (555)
Q Consensus 120 ~~~~~~~L~~L~Ls~N 135 (555)
.+.....|+.|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3334445666666543
No 415
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.67 E-value=1.3e-05 Score=80.61 Aligned_cols=80 Identities=11% Similarity=0.164 Sum_probs=51.1
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCCh--------------hcHHHH--------HHHHHHHHcCCCCcceeee
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLV--------------RHKKEF--------AKEVKKIGSMRHPNIVPLR 527 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~--------------~~~~~~--------~~ei~~l~~l~H~niv~l~ 527 (555)
...||+|+||.||+|...+|+.||||.++.... ...... ..|...|.++.+..+.-..
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 568999999999999988899999998753210 011122 3455556666444332111
Q ss_pred EEEEcCCCceEEEEEeccCCCChhhh
Q 048796 528 AYYWGPREQERLLLADYIQGDSLALH 553 (555)
Q Consensus 528 g~~~~~~~~~~~lv~e~~~~GsL~~~ 553 (555)
-+.. .. .+|||||++++.|.++
T Consensus 180 p~~~-~~---~~LVME~i~G~~L~~l 201 (397)
T 4gyi_A 180 PIAQ-SR---HTIVMSLVDALPMRQV 201 (397)
T ss_dssp EEEE-ET---TEEEEECCSCEEGGGC
T ss_pred eeec-cC---ceEEEEecCCccHhhh
Confidence 1111 12 4799999999888764
No 416
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.61 E-value=4.9e-05 Score=78.09 Aligned_cols=51 Identities=22% Similarity=0.234 Sum_probs=42.6
Q ss_pred CCeeecCCceEEEEEEe-CCCCEEEEEEeccCCh---hcHHHHHHHHHHHHcCCC
Q 048796 470 AEVLGRSSHGTLYKATL-DSGHMLTVKWLRVGLV---RHKKEFAKEVKKIGSMRH 520 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~ei~~l~~l~H 520 (555)
+++||+|+||.||+|+. .+|+.||||++..... ...+.|.+|+.++..++|
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~ 137 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG 137 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence 67999999999999996 6799999999874322 235789999999999987
No 417
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.52 E-value=2.2e-05 Score=71.10 Aligned_cols=64 Identities=19% Similarity=0.165 Sum_probs=28.5
Q ss_pred CCCCccEEEeeCC-cCCCC----CchhccCCCCccEEEcCCCcCCC----CCchhhhCCCCCCeEEccCCccc
Q 048796 75 QFDRLSTFNIRNN-SVTGT----LPSLLEISPRLVTLDVSSNQLKG----PIPDNFFSSMALTNLNLSGNGFS 138 (555)
Q Consensus 75 ~l~~L~~L~L~~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~----~~~~~~~~~~~L~~L~Ls~N~l~ 138 (555)
+-+.|++|+|++| .|... +.+.+..-+.|+.|+|++|+|.. .+...+.....|+.|+|++|.|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3345555555553 44321 22334444455555555555541 12223333444555555555444
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.17 E-value=0.00081 Score=56.68 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=28.1
Q ss_pred EEECCCCcCC-CCCCCCCC-CCCEEEcCCCcCCCCCcccccCCCCccEEEccCCcC
Q 048796 12 VLNLSSNSLS-GTLPTSLK-SCVILDLSRNMISGDISDMQNWEANLEILDLSSNKL 65 (555)
Q Consensus 12 ~L~Ls~N~l~-~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~Ls~N~l 65 (555)
.++.++++|+ ..+|..++ +|++|+|++|+|+.+..+.|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5555566554 23444333 455555555555555555555555555555555544
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.00 E-value=0.0012 Score=63.96 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=59.5
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCC---cceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP---NIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
.+.++.|.++.||+.+..+|+.++||+...........|..|+..++.++|. .+.+++++. . .++||||++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~--~~lvme~l~ 93 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----D--RTLAMEWVD 93 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----T--TEEEEECCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----C--cEEEEEecc
Confidence 3579999999999999888999999997543333346789999999999875 466777653 2 589999999
Q ss_pred CCCh
Q 048796 547 GDSL 550 (555)
Q Consensus 547 ~GsL 550 (555)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 420
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=96.76 E-value=0.0019 Score=61.37 Aligned_cols=80 Identities=11% Similarity=-0.020 Sum_probs=61.6
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
..++.|+.+.||+... .+..+++|............+.+|..++..+. |..+.++++++...+. .|+||||++|.+
T Consensus 20 ~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~--~~lv~e~i~G~~ 96 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW--SNLLMSEADGVL 96 (263)
T ss_dssp ECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEEEECCSSEE
T ss_pred eeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc--eEEEEEecCCee
Confidence 3566778889999986 47899999986532223456889999998874 6677788888876655 899999999998
Q ss_pred hhhh
Q 048796 550 LALH 553 (555)
Q Consensus 550 L~~~ 553 (555)
|.+.
T Consensus 97 l~~~ 100 (263)
T 3tm0_A 97 CSEE 100 (263)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8663
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.75 E-value=0.0026 Score=53.48 Aligned_cols=55 Identities=20% Similarity=0.254 Sum_probs=27.5
Q ss_pred EEEcCCCcCC--CCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCcCC
Q 048796 33 ILDLSRNMIS--GDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNSVT 90 (555)
Q Consensus 33 ~L~L~~N~l~--~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 90 (555)
.++.+++.++ .++..+. .+|+.|+|++|.|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555 3332211 24555555555555444444555555555555555443
No 422
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.24 E-value=0.0047 Score=58.29 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=55.1
Q ss_pred ecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcc--eeeeEEEEcCCCceEEEEEeccCCCChh
Q 048796 474 GRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNI--VPLRAYYWGPREQERLLLADYIQGDSLA 551 (555)
Q Consensus 474 G~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~ni--v~l~g~~~~~~~~~~~lv~e~~~~GsL~ 551 (555)
+.|..+.||+....+|..+++|..... ....+.+|+.+++.+.+.++ .+++++....+. .++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~--~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGR--DWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSC--EEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCC--CEEEEEecCCcccC
Confidence 355669999998777888999987543 22457788888888865554 457887776555 89999999998774
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=93.99 E-value=0.094 Score=50.32 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=53.6
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCC---cceeeeEEEEcCCCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP---NIVPLRAYYWGPREQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~e~~~ 546 (555)
...+|.|..+.||+.++.+|+.+.||+-..........|..|...|+.+.-. -+.+.+++ . + -++||||++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~-~---~~lv~e~l~ 93 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D-D---RTLAMEWVD 93 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E-T---TEEEEECCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c-C---ceEEEEeec
Confidence 3568999999999999999999999987554433445688898888776421 23334432 2 2 478999998
Q ss_pred CCCh
Q 048796 547 GDSL 550 (555)
Q Consensus 547 ~GsL 550 (555)
++..
T Consensus 94 ~~~~ 97 (288)
T 3f7w_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 8754
No 424
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=93.90 E-value=0.056 Score=53.73 Aligned_cols=80 Identities=9% Similarity=0.162 Sum_probs=54.9
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEec--cCCh-hcHHHHHHHHHHHHcCC--CCcceeeeEEEEcCCC-ceEEEEEec
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLR--VGLV-RHKKEFAKEVKKIGSMR--HPNIVPLRAYYWGPRE-QERLLLADY 544 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~--~~~~-~~~~~~~~ei~~l~~l~--H~niv~l~g~~~~~~~-~~~~lv~e~ 544 (555)
+.++.|.++.||+.... +..+++|+.. .... .....+.+|..++..+. +..+.++++++.+... ...++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 46889999999999874 4678888776 3321 23456888999998887 4557788888765421 127899999
Q ss_pred cCCCChh
Q 048796 545 IQGDSLA 551 (555)
Q Consensus 545 ~~~GsL~ 551 (555)
++|..+.
T Consensus 123 v~G~~l~ 129 (359)
T 3dxp_A 123 VSGRVLW 129 (359)
T ss_dssp CCCBCCC
T ss_pred cCCeecC
Confidence 9998773
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=90.03 E-value=0.45 Score=47.82 Aligned_cols=75 Identities=8% Similarity=-0.022 Sum_probs=48.0
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEEEEeccCCh-------hcHHHHHHHHHHHHcCCC--Ccce-eeeEEEEcCCCceE
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTVKWLRVGLV-------RHKKEFAKEVKKIGSMRH--PNIV-PLRAYYWGPREQER 538 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~ei~~l~~l~H--~niv-~l~g~~~~~~~~~~ 538 (555)
.+.+|.|.++.||++... +++.++||....... ...+.+..|.+++..+.+ +..+ +++.+ . .+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d-~~~--~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-D-TEM--A 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-E-TTT--T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-c-CCc--c
Confidence 357899999999999763 568899997643211 123456778888876632 4444 44433 2 334 6
Q ss_pred EEEEeccCCC
Q 048796 539 LLLADYIQGD 548 (555)
Q Consensus 539 ~lv~e~~~~G 548 (555)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 8999999874
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=89.99 E-value=0.73 Score=44.72 Aligned_cols=74 Identities=12% Similarity=0.066 Sum_probs=56.3
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC---CCcceeeeEEEEcCCCceEEEEEeccCC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR---HPNIVPLRAYYWGPREQERLLLADYIQG 547 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~e~~~~ 547 (555)
+.++.|.+..+|+... ++..++||.-... ....|..|...|+.+. ...+.+.+.++...+. .++||||+++
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~--~~lvme~l~G 115 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGH--SFLLLEALNK 115 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSE--EEEEEECCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCc--eEEEEEeccC
Confidence 4688999999999886 5678889976532 3567888888877663 3567778887776555 8999999999
Q ss_pred CCh
Q 048796 548 DSL 550 (555)
Q Consensus 548 GsL 550 (555)
..+
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 427
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=87.42 E-value=1.3 Score=41.57 Aligned_cols=75 Identities=15% Similarity=0.207 Sum_probs=53.0
Q ss_pred eecCCce-EEEEEEe-CCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcceeeeEEEEcCCCceEEEEEeccCCCC
Q 048796 473 LGRSSHG-TLYKATL-DSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNIVPLRAYYWGPREQERLLLADYIQGDS 549 (555)
Q Consensus 473 lG~G~~g-~vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~e~~~~Gs 549 (555)
+..|..| .||+-.. .++..+.||+-... ...++.+|...|+.+. +--+.++++++...+. .++|||++++.+
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~--~~lvme~l~G~~ 106 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDD--AWLLTTAIPGKT 106 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTE--EEEEEECCCSEE
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCe--EEEEEEeeCCcc
Confidence 4445555 6898776 45677889976432 3467888998888764 3235567888877665 899999999977
Q ss_pred hhh
Q 048796 550 LAL 552 (555)
Q Consensus 550 L~~ 552 (555)
+.+
T Consensus 107 ~~~ 109 (272)
T 4gkh_A 107 AFQ 109 (272)
T ss_dssp HHH
T ss_pred ccc
Confidence 654
No 428
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=85.17 E-value=2.2 Score=42.21 Aligned_cols=74 Identities=11% Similarity=0.033 Sum_probs=54.2
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCc--ceeeeEEEEcC-CCceEEEEEeccC
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPN--IVPLRAYYWGP-REQERLLLADYIQ 546 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~n--iv~l~g~~~~~-~~~~~~lv~e~~~ 546 (555)
...++.|....+|+... +|..+++|..... ..+..|..++..+.... +.++++++... +. .|+||||++
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~--~~lv~e~l~ 117 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESL--TYCISRRAQ 117 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSC--EEEEEECCC
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCC--eEEEEEecC
Confidence 34688899999999886 6788999987432 35788888888776533 34566666654 33 799999999
Q ss_pred CCChh
Q 048796 547 GDSLA 551 (555)
Q Consensus 547 ~GsL~ 551 (555)
|..+.
T Consensus 118 G~~l~ 122 (362)
T 3ovc_A 118 GVTLQ 122 (362)
T ss_dssp SEETT
T ss_pred CCCcc
Confidence 86653
No 429
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.34 E-value=0.47 Score=30.74 Aligned_cols=10 Identities=10% Similarity=0.059 Sum_probs=4.0
Q ss_pred HHHHHHHHhh
Q 048796 310 FVLLAYHRAQ 319 (555)
Q Consensus 310 ~~~~~~~~~~ 319 (555)
+++++|.|||
T Consensus 29 l~~~~~~RRR 38 (44)
T 2jwa_A 29 VVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHhheehh
Confidence 3333444433
No 430
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=83.74 E-value=1.6 Score=42.25 Aligned_cols=70 Identities=13% Similarity=0.208 Sum_probs=49.7
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCC---C-cceeeeEEEEcCCCceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRH---P-NIVPLRAYYWGPREQERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H---~-niv~l~g~~~~~~~~~~~lv~e~~ 545 (555)
.+.++.|....||+. |..+++|...... ....+.+|..++..+.+ + .+.+++++ +. .++||||+
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~--~~lvme~i 109 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SD--RFNIMKYI 109 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CS--SCEEEECC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CC--cEEEEeec
Confidence 457899999999987 6678888764321 23568899988888766 2 22334443 33 68999999
Q ss_pred CCCChh
Q 048796 546 QGDSLA 551 (555)
Q Consensus 546 ~~GsL~ 551 (555)
+|.++.
T Consensus 110 ~G~~l~ 115 (320)
T 3r70_A 110 KGERIT 115 (320)
T ss_dssp CCBCCC
T ss_pred CCcccc
Confidence 998875
No 431
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=80.49 E-value=3.4 Score=39.64 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=52.5
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCC---cceeeeEEEE-cCCCceEEEEEeccC
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP---NIVPLRAYYW-GPREQERLLLADYIQ 546 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~---niv~l~g~~~-~~~~~~~~lv~e~~~ 546 (555)
..++.|....||+. |..++||.-.. ......+.+|..++..+.+. .+.+.+.++. ..+. .++||||++
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~--~~~v~e~i~ 96 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGN--PFVGYRKVQ 96 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSC--EEEEEECCC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCc--eEEEEeccC
Confidence 45788888899987 56688887432 22356789999999988753 2445666664 2333 789999999
Q ss_pred CCChhh
Q 048796 547 GDSLAL 552 (555)
Q Consensus 547 ~GsL~~ 552 (555)
|..+.+
T Consensus 97 G~~l~~ 102 (306)
T 3tdw_A 97 GQILGE 102 (306)
T ss_dssp SEECHH
T ss_pred CeECch
Confidence 977654
No 432
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=80.02 E-value=0.59 Score=29.40 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=9.0
Q ss_pred eeeehhhHHHHHHHHHHHHHH
Q 048796 295 VAIIVASVGAAVMIVFVLLAY 315 (555)
Q Consensus 295 ~~iv~~~~~~~~~~~~~~~~~ 315 (555)
.++++++++++.+++.+.+++
T Consensus 14 AGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 14 VAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHHHHHHH
Confidence 444444444444444333333
No 433
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=79.35 E-value=0.79 Score=45.16 Aligned_cols=81 Identities=11% Similarity=0.026 Sum_probs=52.6
Q ss_pred Cee-ecCCceEEEEEEeC-------CCCEEEEEEeccCC---hhcHHHHHHHHHHHHcCCC---CcceeeeEEEEcCCC-
Q 048796 471 EVL-GRSSHGTLYKATLD-------SGHMLTVKWLRVGL---VRHKKEFAKEVKKIGSMRH---PNIVPLRAYYWGPRE- 535 (555)
Q Consensus 471 ~~l-G~G~~g~vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~ei~~l~~l~H---~niv~l~g~~~~~~~- 535 (555)
+.| +.|....+|+.... ++..+++|...... ......+.+|..++..+.. ..+.++++++.+...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888999988763 26678888765432 1112456778877776642 345567777654420
Q ss_pred ceEEEEEeccCCCChh
Q 048796 536 QERLLLADYIQGDSLA 551 (555)
Q Consensus 536 ~~~~lv~e~~~~GsL~ 551 (555)
...++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 1268999999987664
No 434
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.33 E-value=0.17 Score=52.21 Aligned_cols=59 Identities=10% Similarity=0.022 Sum_probs=16.8
Q ss_pred CCeeecCCceEEEEEEeC-CCCEEEE------EEeccCCh--hcHHHHHHHHHHHHcCCCCcceeeeEEEE
Q 048796 470 AEVLGRSSHGTLYKATLD-SGHMLTV------KWLRVGLV--RHKKEFAKEVKKIGSMRHPNIVPLRAYYW 531 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~-~g~~vav------K~l~~~~~--~~~~~~~~ei~~l~~l~H~niv~l~g~~~ 531 (555)
.+.+| ||.||+|.+. ....||| |..+.+.. .....|.+|..++...+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 34565 9999999984 3467888 76654322 23457889999999999999999988764
No 435
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=68.67 E-value=3.7 Score=39.17 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=49.9
Q ss_pred CCeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-CCcc--eeeeEEEEcCCC-ceEEEEEecc
Q 048796 470 AEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-HPNI--VPLRAYYWGPRE-QERLLLADYI 545 (555)
Q Consensus 470 ~~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-H~ni--v~l~g~~~~~~~-~~~~lv~e~~ 545 (555)
.+.++.|.+..||+.. ..+++|..... .....+.+|..+++.+. +..+ .+.+..+...+. .-.|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999853 45888876432 33567889999998773 3332 334433322221 0148899999
Q ss_pred CCCChhh
Q 048796 546 QGDSLAL 552 (555)
Q Consensus 546 ~~GsL~~ 552 (555)
+|..|.+
T Consensus 99 ~G~~l~~ 105 (304)
T 3sg8_A 99 KGVPLTP 105 (304)
T ss_dssp CCEECCH
T ss_pred CCeECCc
Confidence 9977653
No 436
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=64.83 E-value=7.3 Score=37.51 Aligned_cols=72 Identities=21% Similarity=0.310 Sum_probs=39.0
Q ss_pred eeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHc-----CCCCcceeee-E--EEEcCCCceEEEEEe
Q 048796 472 VLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGS-----MRHPNIVPLR-A--YYWGPREQERLLLAD 543 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~-----l~H~niv~l~-g--~~~~~~~~~~~lv~e 543 (555)
.++.|..+.||+....+| .+++|+.... ...+..|..++.. +..|.++... | +....+. .+++||
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~--~~~l~~ 111 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSF--LFVVYD 111 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTE--EEEEEE
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCE--EEEEEE
Confidence 466677889999987544 5899988652 1223333333332 3345554311 1 1112333 789999
Q ss_pred ccCCCCh
Q 048796 544 YIQGDSL 550 (555)
Q Consensus 544 ~~~~GsL 550 (555)
|++|..+
T Consensus 112 ~i~G~~~ 118 (346)
T 2q83_A 112 WIEGRPF 118 (346)
T ss_dssp CCCCBCC
T ss_pred eecCccC
Confidence 9998754
No 437
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=60.00 E-value=17 Score=28.15 Aligned_cols=45 Identities=11% Similarity=0.097 Sum_probs=21.5
Q ss_pred CCCCCCccccCCCCccEEEeeCCcCCCCCchhccCCCCccEEEcCC
Q 048796 65 LSGSLPNLTSQFDRLSTFNIRNNSVTGTLPSLLEISPRLVTLDVSS 110 (555)
Q Consensus 65 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 110 (555)
++.+-..+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33334444555555555555433 3334444555555555555543
No 438
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=56.61 E-value=23 Score=27.49 Aligned_cols=50 Identities=8% Similarity=0.065 Sum_probs=40.2
Q ss_pred CCcCCCCCcccccCCCCccEEEccCCcCCCCCCccccCCCCccEEEeeCCc
Q 048796 38 RNMISGDISDMQNWEANLEILDLSSNKLSGSLPNLTSQFDRLSTFNIRNNS 88 (555)
Q Consensus 38 ~N~l~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 88 (555)
+..++.+....|..+.+|+.+.|-.+ ++.+-..+|.++.+|+.+.+....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 34566677788998889999999876 555777889999999999998754
No 439
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=48.91 E-value=26 Score=35.02 Aligned_cols=72 Identities=11% Similarity=0.139 Sum_probs=43.7
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEecc-----CC----hhcHHHHHHHHHHHH-cCCCCcceeeeEEEEcCCCceEEE
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRV-----GL----VRHKKEFAKEVKKIG-SMRHPNIVPLRAYYWGPREQERLL 540 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~-----~~----~~~~~~~~~ei~~l~-~l~H~niv~l~g~~~~~~~~~~~l 540 (555)
+.+|.|..+.||+... ++..++||.... .. ......+..|+..+. ...+..+.+++.+. .+. .++
T Consensus 40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~--~~l 114 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTM--ALI 114 (420)
T ss_dssp EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTT--TEE
T ss_pred EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCc--cEE
Confidence 4688999999999975 567899994321 10 012334444543332 22234455666554 344 689
Q ss_pred EEecc-CC
Q 048796 541 LADYI-QG 547 (555)
Q Consensus 541 v~e~~-~~ 547 (555)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 440
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=43.71 E-value=25 Score=22.70 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=14.6
Q ss_pred eehhhHHHHHHHHHHHHHHHHhhhhh
Q 048796 297 IIVASVGAAVMIVFVLLAYHRAQLKE 322 (555)
Q Consensus 297 iv~~~~~~~~~~~~~~~~~~~~~~~~ 322 (555)
|.+++++++++++++++.++...+++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 44555555555555555556655554
No 441
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=43.08 E-value=20 Score=23.13 Aligned_cols=19 Identities=5% Similarity=0.113 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhhhhhc
Q 048796 305 AVMIVFVLLAYHRAQLKEF 323 (555)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~ 323 (555)
+++++++.+.+..+-+|+.
T Consensus 21 vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 21 ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhheehhh
Confidence 4455666666777666663
No 442
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=41.08 E-value=47 Score=31.52 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=45.9
Q ss_pred eeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCC--cceeeeEE-----EEcCCCceEEEEEec
Q 048796 472 VLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHP--NIVPLRAY-----YWGPREQERLLLADY 544 (555)
Q Consensus 472 ~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~--niv~l~g~-----~~~~~~~~~~lv~e~ 544 (555)
.++ |....||+....+|+.+++|...... ...+.+..|..++..+... .+.+++.. ....+. .+++|||
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~--~~~l~~~ 108 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGF--YFAVFPS 108 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTE--EEEEEEC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCE--EEEEEEe
Confidence 466 77889998877677789999986431 1345566677766655321 23333332 111222 6789999
Q ss_pred cCCCCh
Q 048796 545 IQGDSL 550 (555)
Q Consensus 545 ~~~GsL 550 (555)
++|..+
T Consensus 109 i~G~~~ 114 (328)
T 1zyl_A 109 VGGRQF 114 (328)
T ss_dssp CCCEEC
T ss_pred cCCCCC
Confidence 998543
No 443
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=39.68 E-value=24 Score=22.74 Aligned_cols=26 Identities=19% Similarity=0.328 Sum_probs=15.9
Q ss_pred eehhhHHHHHHHHHHHHHHHHhhhhh
Q 048796 297 IIVASVGAAVMIVFVLLAYHRAQLKE 322 (555)
Q Consensus 297 iv~~~~~~~~~~~~~~~~~~~~~~~~ 322 (555)
|.+++++++++++++...++...+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 45555665666666666667766655
No 444
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=33.36 E-value=14 Score=23.31 Aligned_cols=9 Identities=22% Similarity=0.040 Sum_probs=3.3
Q ss_pred ehhhHHHHH
Q 048796 298 IVASVGAAV 306 (555)
Q Consensus 298 v~~~~~~~~ 306 (555)
+++++++++
T Consensus 16 ~~~vv~Gv~ 24 (41)
T 2k9y_A 16 IGGVAVGVV 24 (41)
T ss_dssp HHHHHHHHH
T ss_pred EeehhHHHH
Confidence 333333333
No 445
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=29.16 E-value=30 Score=32.84 Aligned_cols=75 Identities=9% Similarity=0.088 Sum_probs=40.4
Q ss_pred CeeecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC-----CCcceeee-E--EEEcCCCceEEEEE
Q 048796 471 EVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR-----HPNIVPLR-A--YYWGPREQERLLLA 542 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~-----H~niv~l~-g--~~~~~~~~~~~lv~ 542 (555)
+.++.|....+|+....+| .+++|...... ..+.+..|+.++..+. -|.++... | +....+. .++++
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~--~~~l~ 102 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGR--PAALI 102 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTE--EEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCE--EEEEE
Confidence 3567788889999987555 57888876521 1234455666655443 23333210 1 0011233 68999
Q ss_pred eccCCCCh
Q 048796 543 DYIQGDSL 550 (555)
Q Consensus 543 e~~~~GsL 550 (555)
+|++|..+
T Consensus 103 ~~l~G~~~ 110 (322)
T 2ppq_A 103 SFLEGMWL 110 (322)
T ss_dssp ECCCCBCC
T ss_pred EeCCCcCC
Confidence 99998654
No 446
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=25.27 E-value=77 Score=31.68 Aligned_cols=72 Identities=11% Similarity=0.123 Sum_probs=47.7
Q ss_pred CeeecCCceEEEEEEeCC--------CCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcc-eeeeEEEEcCCCceEEEE
Q 048796 471 EVLGRSSHGTLYKATLDS--------GHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNI-VPLRAYYWGPREQERLLL 541 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~ni-v~l~g~~~~~~~~~~~lv 541 (555)
..|+.|-...+|+...++ +..+.+|+.... ...+.+.+|..++..+...++ .++++.+. . .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~---~---g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS---G---GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET---T---EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC---C---CEE
Confidence 467788889999998753 478888887431 112556678888877754444 34565432 2 389
Q ss_pred EeccCCCCh
Q 048796 542 ADYIQGDSL 550 (555)
Q Consensus 542 ~e~~~~GsL 550 (555)
+||++|.+|
T Consensus 151 ~e~l~G~~l 159 (429)
T 1nw1_A 151 EEYIPSRPL 159 (429)
T ss_dssp ECCCCEEEC
T ss_pred EEEeCCccc
Confidence 999986444
No 447
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=20.81 E-value=76 Score=31.20 Aligned_cols=73 Identities=11% Similarity=0.119 Sum_probs=43.2
Q ss_pred CeeecCCceEEEEEEeC--------CCCEEEEEEeccCChhcHHHHHHHHHHHHcCCCCcce-eeeEEEEcCCCceEEEE
Q 048796 471 EVLGRSSHGTLYKATLD--------SGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMRHPNIV-PLRAYYWGPREQERLLL 541 (555)
Q Consensus 471 ~~lG~G~~g~vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~H~niv-~l~g~~~~~~~~~~~lv 541 (555)
+.+..|-...+|+...+ ++..+.+|+.... ......+.+|..+++.+.-..+. ++++++. + .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C----ccE
Confidence 45666778889999874 2478888885332 12356677888888776433333 4555442 2 289
Q ss_pred EeccCCCCh
Q 048796 542 ADYIQGDSL 550 (555)
Q Consensus 542 ~e~~~~GsL 550 (555)
+||++|..|
T Consensus 129 ~e~i~G~~l 137 (379)
T 3feg_A 129 EQYIPSRPL 137 (379)
T ss_dssp EECCSEEEC
T ss_pred EEEecCccC
Confidence 999998654
No 448
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=20.40 E-value=1.7e+02 Score=27.83 Aligned_cols=68 Identities=12% Similarity=0.006 Sum_probs=39.0
Q ss_pred ecCCceEEEEEEeCCCCEEEEEEeccCChhcHHHHHHHHHHHHcCC---CCcceeeeEE------EEcCCCceEEEEEec
Q 048796 474 GRSSHGTLYKATLDSGHMLTVKWLRVGLVRHKKEFAKEVKKIGSMR---HPNIVPLRAY------YWGPREQERLLLADY 544 (555)
Q Consensus 474 G~G~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~~~~ei~~l~~l~---H~niv~l~g~------~~~~~~~~~~lv~e~ 544 (555)
|.|....||+....+| .+++|+...... ..|+.++..+. -|.+.+.+.. ....+. .+++|||
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~--~~~l~~~ 102 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHF--KIIAYPF 102 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSE--EEEEEEC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCE--EEEEEec
Confidence 3344679999987666 899998765432 23333333321 1213333321 122233 7899999
Q ss_pred cCCCCh
Q 048796 545 IQGDSL 550 (555)
Q Consensus 545 ~~~GsL 550 (555)
++|..+
T Consensus 103 i~G~~~ 108 (339)
T 3i1a_A 103 IHAPNG 108 (339)
T ss_dssp CCCCBT
T ss_pred cCCCcC
Confidence 998765
Done!