BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048797
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S3N2|DCOR_CAPAN Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1
Length = 435
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 144/304 (47%), Gaps = 72/304 (23%)
Query: 4 ALGVSGKSVSLTVALRNENGL--AEALGSNFD-YASQAEIKG--KWHPRCDLLIRIKALD 58
+LG+S + + + E+ + AE +G N Y S+ E+ K HP+C+LL+RIK ++
Sbjct: 129 SLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMN 188
Query: 59 DCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGATDFGAFDGAISAAK 118
D A CP K GA EI LL A AS+L V G+SFHIGSG D A+ GAI+AAK
Sbjct: 189 DGNARCPMG--PKYGALPEEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAAAK 246
Query: 119 AVFDAASARHGLTDQ---------------MRAKHWRRGRADCHFGAGP----------F 153
VF+ A A+ G++ A + HF P F
Sbjct: 247 QVFETA-AKFGMSKMNVLDIGGGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGRF 305
Query: 154 PRDSAFTLATR--------NCRE------------------------SSAC-SNRT---C 177
++AFTLAT + RE AC SNR C
Sbjct: 306 FAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPLACMSNRVNLNC 365
Query: 178 TG-MIYNSTVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
+G ++ ST+FGPT DA D + + PELQV +W++F +GA T GS F GFNT+ I
Sbjct: 366 SGSKMFPSTIFGPTCDALDTVLRDYHVPELQVNDWVIFPNMGAYTKAAGSNFNGFNTSAI 425
Query: 235 PTCL 238
T L
Sbjct: 426 VTHL 429
>sp|P50134|DCOR_DATST Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1
Length = 431
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 137/304 (45%), Gaps = 72/304 (23%)
Query: 4 ALGVSGKSVSLTVALRNENGL--AEALGSN---FDYASQAEIKGKWHPRCDLLIRIKALD 58
+LG+S + + E+ + A +G N FD + K HP+C+LL+RIK +D
Sbjct: 125 SLGISPDRIVFANPCKPESDIIFAAKVGVNLTTFDSEDEVYKIRKHHPKCELLLRIKPMD 184
Query: 59 DCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGATDFGAFDGAISAAK 118
D A CP K GA E+ LL A A++L V G+SFHIGSG D A+ GAI+AAK
Sbjct: 185 DGNARCPMG--PKYGALPEEVEPLLRTAQAARLTVSGVSFHIGSGDADSKAYLGAIAAAK 242
Query: 119 AVFDAASARHGLTDQ---------------MRAKHWRRGRADCHF----------GAGPF 153
VF+ A AR G++ A R + HF G F
Sbjct: 243 GVFETA-ARFGMSKMTVLDIGGGFTSGHQFTTASAAVRSALEQHFHDEQELTIIAEPGRF 301
Query: 154 PRDSAFTLAT-----------------------RNC---------RESSAC----SNRTC 177
++AFTLAT NC AC SN C
Sbjct: 302 FAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLACMSNRSNLNC 361
Query: 178 TG-MIYNSTVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
G + STVFGPT DA D + + PELQV +WL+F +GA T GS F GFNT+ I
Sbjct: 362 GGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAI 421
Query: 235 PTCL 238
T L
Sbjct: 422 VTHL 425
>sp|O22616|DCOR_SOLLC Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2
Length = 431
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 129/282 (45%), Gaps = 70/282 (24%)
Query: 24 LAEALGSNFD-YASQAEIKG--KWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIG 80
AE +G N Y S+ E+ K HP+C+LL+RIK + D A CP K GA EI
Sbjct: 147 FAEKIGVNLTTYDSEDEVYKIRKHHPKCELLLRIKPMTDGNARCPMG--PKYGALPEEIE 204
Query: 81 ALLEAALASQLGVVGISFHIGSGATDFGAFDGAISAAKAVFDAASARHGLTDQ------- 133
LL A A++L V G+SFHIGSG D A+ GAI+AAK VF+ A A+ G+
Sbjct: 205 PLLRTAQAARLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETA-AQLGMPKMTVLDIGG 263
Query: 134 --------MRAKHWRRGRADCHFGAGP----------FPRDSAFTLAT------------ 163
A + + HF P F ++AFTLAT
Sbjct: 264 GFTSGHQFTTAAPAVKSALETHFHDFPELTIIAEPGRFFAETAFTLATTIIGKRVRGELK 323
Query: 164 -----------RNC---------RESSAC-SNR---TCTG-MIYNSTVFGPTLDAYDKLF 198
NC AC SNR C G + STVFGPT DA D +
Sbjct: 324 EYWINDGLYGSMNCVLYDHATVTATPLACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVL 383
Query: 199 TGH--PELQVGNWLVFSQIGACTAVYGSGFKGFNTADIPTCL 238
+ PELQV +WL+F +GA T GS F GFNT+ I T L
Sbjct: 384 RDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAIVTHL 425
>sp|Q9UQW9|DCOR_SCHPO Ornithine decarboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=spe1 PE=2 SV=1
Length = 432
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 108/271 (39%), Gaps = 77/271 (28%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD A + + HP LL+RI DD ++C + K GA+L + G LL+ A + +L
Sbjct: 162 FDNADELYKVKQHHPNSRLLLRIST-DDSNSLCRLSL--KFGASLDDTGKLLDIAKSLEL 218
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFDAASAR------------------HGLTDQ 133
VVG+SFH+GSG+ D AF AI ++ VFD R G+ D
Sbjct: 219 NVVGVSFHVGSGSYDPSAFLDAIQRSRQVFDQGLERGFNFDLLDIGGGFMNDSFDGVADL 278
Query: 134 MRAKHWRRGRADCHFG--------AGPFPRDSAFTLATR--------------------- 164
+R+ D +F G F S+FTLA
Sbjct: 279 IRSA------LDTYFDPSIRVISEPGRFFVSSSFTLAVNVIAKRKLDDEEKVMYYVNDGV 332
Query: 165 ----NC-----RESSACSNRTCTGMIYNSTV---------FGPTLDAYDKLFTG---HPE 203
NC + A + + +YN V +GPT D+ D + E
Sbjct: 333 YGSLNCILFDHQHPVARVLKCGSRFVYNDLVGTGQHRCFIWGPTCDSLDVIANDAHLPYE 392
Query: 204 LQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
L VG+W+ F GA T S F GF T+ I
Sbjct: 393 LNVGDWIYFEDAGAYTVAAASCFNGFKTSRI 423
>sp|P08432|DCOR_YEAST Ornithine decarboxylase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SPE1 PE=1 SV=1
Length = 466
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 27 ALGSNFDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAA 86
+ S FD + K+HP LL+RI A DD A C + +K G + + LL+A
Sbjct: 175 VMKSTFDNVEELHKIKKFHPESQLLLRI-ATDDSTAQCRLS--TKYGCEMENVDVLLKAI 231
Query: 87 LASQLGVVGISFHIGSGATDFGAFDGAISAAKAVFDAASARHGL 130
L + G+SFH+GSGA+DF + A+ A+ VFD A+ +GL
Sbjct: 232 KELGLNLAGVSFHVGSGASDFTSLYKAVRDARTVFDKAANEYGL 275
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 174 NRTCTGMIYNSTVFGPTLDAYD---KLFTGHPELQVGNWLVFSQIGACTAVYGSGFKGF- 229
N+T + Y +++GPT D D K + ++ VG+W F +GA T+ + F GF
Sbjct: 394 NKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSSAATQFNGFE 453
Query: 230 NTADI 234
TADI
Sbjct: 454 QTADI 458
>sp|P00860|DCOR_MOUSE Ornithine decarboxylase OS=Mus musculus GN=Odc1 PE=1 SV=2
Length = 461
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD + + HP+ L++RI A DD KAVC + K GA L LLE A +
Sbjct: 133 FDSEIELMKVARAHPKAKLVLRI-ATDDSKAVCRLS--VKFGATLKTSRLLLERAKELNI 189
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFDAAS 125
V+G+SFH+GSG TD F A+S A+ VFD A+
Sbjct: 190 DVIGVSFHVGSGCTDPETFVQAVSDARCVFDMAT 223
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 182 YNSTVFGPTLDAYDKLFT--GHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
Y+S+++GPT D D++ PE+ VG+W++F +GA T S F GF +I
Sbjct: 351 YSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNI 405
>sp|P27118|DCOR_CHICK Ornithine decarboxylase (Fragment) OS=Gallus gallus GN=ODC1 PE=2
SV=1
Length = 450
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 31 NFDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQ 90
FD + + HP+ LL+RI DD KAVC + K GA L LLE A
Sbjct: 122 TFDSEVELMKIARPHPKAKLLLRITT-DDSKAVCRLS--VKFGATLKTSRLLLERAKELD 178
Query: 91 LGVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
L +VG+SFH+GSG TD F AIS A+ VFD
Sbjct: 179 LAIVGVSFHVGSGCTDPETFVQAISDARCVFD 210
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 182 YNSTVFGPTLDAYDKLFT--GHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
Y+ +++GPT D D++ PELQVG+W++F +GA T S F GF I
Sbjct: 341 YSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAAASTFNGFQRPTI 395
>sp|P27117|DCOR_BOVIN Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1
Length = 461
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD + + HP+ L++RI A DD KAVC + K GA L LLE A +
Sbjct: 133 FDSEVELMKVARAHPKAKLVLRI-ATDDSKAVCRLS--VKFGATLKTSRLLLERAKELDI 189
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
V+G+SFH+GSG TD F AIS A+ VFD
Sbjct: 190 DVIGVSFHVGSGCTDPETFVQAISDARCVFD 220
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 182 YNSTVFGPTLDAYDKLFT--GHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
Y+S+++GPT D D++ PE+ VG+W++F +GA T S F GF I
Sbjct: 351 YSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTI 405
>sp|P11926|DCOR_HUMAN Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2
Length = 461
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD + + HP+ L++RI A DD KAVC + K GA L LLE A +
Sbjct: 133 FDSEVELMKVARAHPKAKLVLRI-ATDDSKAVCRLS--VKFGATLRTSRLLLERAKELNI 189
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
VVG+SFH+GSG TD F AIS A+ VFD
Sbjct: 190 DVVGVSFHVGSGCTDPETFVQAISDARCVFD 220
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 182 YNSTVFGPTLDAYDKLFT--GHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
Y+S+++GPT D D++ PE+ VG+W++F +GA T S F GF I
Sbjct: 351 YSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTI 405
>sp|P27119|DCOR_MUSPA Ornithine decarboxylase OS=Mus pahari GN=Odc1 PE=2 SV=1
Length = 461
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 31 NFDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQ 90
FD + + HP+ L++RI A DD KAVC + K GA L LLE A
Sbjct: 132 TFDSEIELMKVARAHPKAKLVLRI-ATDDSKAVCRLS--VKFGATLKTSRLLLERAKELN 188
Query: 91 LGVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
+ V+G+SFH+GSG TD F A+S A+ VFD
Sbjct: 189 IDVIGVSFHVGSGCTDPETFVQAVSDARCVFD 220
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 182 YNSTVFGPTLDAYDKLFT--GHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
Y+S+++GPT D D++ PE+ VG+W++F +GA T S F GF +I
Sbjct: 351 YSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNI 405
>sp|P09057|DCOR_RAT Ornithine decarboxylase OS=Rattus norvegicus GN=Odc1 PE=1 SV=1
Length = 461
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 31 NFDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQ 90
FD + + HP+ L++RI A DD KAVC + K GA L LLE A
Sbjct: 132 TFDSEIELMKVARAHPKAKLVLRI-ATDDSKAVCRLS--VKFGATLKTSRLLLERAKELN 188
Query: 91 LGVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
+ V+G+SFH+GSG TD F A+S A+ VFD
Sbjct: 189 IDVIGVSFHVGSGCTDPETFVQAVSDARCVFD 220
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 182 YNSTVFGPTLDAYDKLFT--GHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
Y+S+++GPT D D++ PE+ VG+W++F +GA T S F GF +I
Sbjct: 351 YSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNI 405
>sp|P78599|DCOR_CANAL Ornithine decarboxylase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SPE1 PE=3 SV=1
Length = 473
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 42 GKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIG 101
K+HP C +LIR+ DD A C + C N A IG +L A L V G++FH+G
Sbjct: 182 AKFHPHCKILIRL-ITDDSTAQCQLSTKFGCDLNTA-IGEILPKAKELGLQVHGVAFHVG 239
Query: 102 SGATDFGAFDGAISAAKAVFD 122
SGA DF + AI ++ +FD
Sbjct: 240 SGAKDFSSIYQAIKDSRILFD 260
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 182 YNSTVFGPTLDAYD---KLFTGHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADIPT 236
+ +++GPT D D L +QVG+WL F +GA T+ + F G ++ + T
Sbjct: 408 FKFSIWGPTCDGLDCVSSLAKLSKNVQVGDWLFFENVGAYTSCASTKFNGLSSGETKT 465
>sp|P27120|DCOR1_XENLA Ornithine decarboxylase 1 OS=Xenopus laevis GN=odc1-a PE=2 SV=1
Length = 460
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD + + HP L++RI A DD KAVC + K GA L LLE A +
Sbjct: 133 FDSEVELMKVARNHPNAKLVLRI-ATDDSKAVCRLS--VKFGATLKTSRLLLERAKELNV 189
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
++G+SFH+GSG TD + A+S A+ VFD
Sbjct: 190 DIIGVSFHVGSGCTDPQTYVQAVSDARCVFD 220
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 182 YNSTVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFN 230
Y+S+++GPT D D++ PELQVG+W++F +GA T S F GF
Sbjct: 352 YSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVAAASTFNGFQ 402
>sp|P07805|DCOR_TRYBB Ornithine decarboxylase OS=Trypanosoma brucei brucei PE=1 SV=2
Length = 423
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD + E K HP+ +++RI + DD A C + K GA + + +LE A +
Sbjct: 131 FDCVDELEKVAKTHPKAKMVLRI-STDDSLARCRLS--VKFGAKVEDCRFILEQAKKLNI 187
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFDAAS 125
V G+SFH+GSG+TD F AIS ++ VFD +
Sbjct: 188 DVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGT 221
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 181 IYNSTVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
+Y S+V+GPT D D++ + PE+QVG WL+F +GA T V S F GF + I
Sbjct: 348 LYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTI 403
>sp|Q54UF3|DCOR_DICDI Probable ornithine decarboxylase OS=Dictyostelium discoideum GN=odc
PE=3 SV=1
Length = 461
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD S+ E K+ P +L++RI A DD K+V SK G ++ + LLE A L
Sbjct: 180 FDNLSELEKIEKFFPEAELVLRI-APDDSKSVMRFG--SKFGVHIDDCNDLLEMAKEMNL 236
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFDAAS 125
VVG+SFH+GSG ++ A+ K+VFD A
Sbjct: 237 KVVGVSFHVGSGCQSGDSYADALIMVKSVFDMAK 270
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 185 TVFGPTLDAYDKLF--TGHPELQVGNWLVFSQIGACTAVYGSGFKGF 229
T+FGPT D+ D + T PEL++G+WL F +GA T S F GF
Sbjct: 396 TLFGPTCDSIDVVLKDTQIPELKIGDWLYFQDMGAYTIASSSSFNGF 442
>sp|P14019|DCOR_CRIGR Ornithine decarboxylase OS=Cricetulus griseus GN=ODC1 PE=2 SV=3
Length = 455
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD + + HP+ L+ A DD KAVC + K GA L LLE A +
Sbjct: 129 FDSEIELMKVARAHPKVTKLVLRIATDDSKAVCRLS--VKFGATLRTSRLLLERAKELNI 186
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
V+G+SFH+GSG TD F A+S A+ VFD
Sbjct: 187 DVIGVSFHVGSGCTDPETFVQALSDARCVFD 217
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 182 YNSTVFGPTLDAYDKLFT--GHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
Y+S+++GPT D D++ PE+ VG+W++F +GA T S F GF I
Sbjct: 345 YSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPSI 399
>sp|P27121|DCOR_NEUCR Ornithine decarboxylase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=spe-1
PE=2 SV=1
Length = 484
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD A + + +P +L +RI DD ++C + K GA+L LL LA QL
Sbjct: 178 FDNADELRKIARLYPDAELFLRILT-DDSSSLCRFSM--KFGASLDSTDGLL--GLARQL 232
Query: 92 G--VVGISFHIGSGATDFGAFDGAISAAKAVFDAASA 126
G VVG+SFH+GSGA+D AF A+ A VF A+A
Sbjct: 233 GLNVVGVSFHVGSGASDPTAFLKAVQDAHVVFQQAAA 269
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 185 TVFGPTLDAYDKLFTG---HPELQVGNWLVFSQIGACTAVYGSGFKGF-NTADI 234
+++GPT D D++ L VG+WL F +GA T + F GF N D+
Sbjct: 416 SIWGPTCDGIDRITESIRFREILDVGDWLYFEDMGAYTKCSATTFNGFSNEHDV 469
>sp|Q9I8S4|DCOR2_XENLA Ornithine decarboxylase 2 OS=Xenopus laevis GN=odc1-b PE=2 SV=1
Length = 456
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 32 FDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQL 91
FD + + HP +++RI A DD K+ + K GA L LLE A +
Sbjct: 132 FDNEVELSKVSRSHPNARMVLRI-ATDDSKSSARLS--VKFGAPLKSCRRLLEMAKNLSV 188
Query: 92 GVVGISFHIGSGATDFGAFDGAISAAKAVFDAAS 125
V+G+SFH+GSG TD A+ AIS A+ VF+ AS
Sbjct: 189 DVIGVSFHVGSGCTDSKAYTQAISDARLVFEMAS 222
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 181 IYNSTVFGPTLDAYDKL--FTGHPELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
+Y S+++GPT D D++ PEL VG+WL+F +GA T S F GF + +
Sbjct: 347 LYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASSNFNGFQQSPV 402
>sp|O50657|DCLO_SELRU Lysine/ornithine decarboxylase OS=Selenomonas ruminantium GN=ldc
PE=1 SV=1
Length = 393
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 1 MLNALGVSGKSVSLTVALRNENGLAEALGSN-----FDYASQAEIKGKWHPRCDLLIRIK 55
+L+ LGV G + +++ GL A N FD S+ + K P D+L+RI
Sbjct: 79 ILHELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLVRI- 137
Query: 56 ALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGATDFGAFDGAIS 115
A+ + KA+ ++K GA + E LL+AA + L +GI FH+GS + A++ A+
Sbjct: 138 AVRNNKALV--DLNTKFGAPVEEALDLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEALL 195
Query: 116 AAKAVFDAAS 125
A+ +FD A
Sbjct: 196 VARRLFDEAE 205
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 184 STVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFNTADIPTCLL 239
ST GP+ D D L+ PEL++G+ ++ +++G+ T+V + F GF A PT +
Sbjct: 316 STFGGPSCDGIDVLYRDFMAPELKIGDKVLVTEMGSYTSVSATRFNGFYLA--PTIIF 371
>sp|O35484|AZIN1_MOUSE Antizyme inhibitor 1 OS=Mus musculus GN=Azin1 PE=1 SV=1
Length = 448
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 112/306 (36%), Gaps = 81/306 (26%)
Query: 1 MLNALGVSGKSVSLTVALRNENGLAEA--LGSNF---DYASQAEIKGKWHPRCDLLIRIK 55
++ LGVS +++ T + + + A +G N D + + + HP +L+ I
Sbjct: 97 LVQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIA 156
Query: 56 ALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGATDFGAFDGAIS 115
D+ + + + K G L LLE A + ++G+ FH+ S ++ + A+S
Sbjct: 157 TEDN---IGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALS 213
Query: 116 AAKAVFDAASARHGLTDQM---------------RAKHWRRGRADCHF----------GA 150
A+ VFD A G T M H D +F
Sbjct: 214 DARCVFDMA-GEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEP 272
Query: 151 GPFPRDSAFTLATRNCRESSACSNRTCTGM------------------------------ 180
G + SAFTLA + +++ +G+
Sbjct: 273 GSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDL 332
Query: 181 ---------------IYNSTVFGPTLDAYDKLFTG--HPELQVGNWLVFSQIGACTAVYG 223
++ S+++GP+ D D++ PEL VG+WL+F +GA +
Sbjct: 333 NTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEP 392
Query: 224 SGFKGF 229
S F F
Sbjct: 393 SAFNDF 398
>sp|Q63764|AZIN1_RAT Antizyme inhibitor 1 OS=Rattus norvegicus GN=Azin1 PE=1 SV=1
Length = 448
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 108/294 (36%), Gaps = 81/294 (27%)
Query: 1 MLNALGVSGKSVSLTVALRNENGL--AEALGSNF---DYASQAEIKGKWHPRCDLLIRIK 55
++ LGVS +++ T + + + A +G N D + + + HP +L+ I
Sbjct: 97 LVQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIA 156
Query: 56 ALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGATDFGAFDGAIS 115
D+ + + + K G L LLE A + ++G+ FHI S ++ + A+S
Sbjct: 157 TEDN---IGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALS 213
Query: 116 AAKAVFDAASARHGLTDQM---------------RAKHWRRGRADCHF----------GA 150
A+ VFD A G T M H D +F
Sbjct: 214 DARCVFDMA-GEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEP 272
Query: 151 GPFPRDSAFTLATRNCRESSACSNRTCTGM------------------------------ 180
G + SAFTLA + +++ +G+
Sbjct: 273 GSYYVSSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDL 332
Query: 181 ---------------IYNSTVFGPTLDAYDKLFTG--HPELQVGNWLVFSQIGA 217
++ S+++GP+ D D++ PEL VG+WL+F +GA
Sbjct: 333 NTVPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGA 386
>sp|P27116|DCOR_LEIDO Ornithine decarboxylase OS=Leishmania donovani PE=3 SV=1
Length = 707
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 25 AEALGSNF---DYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGA 81
A+A G + D + E + P +IRIK +D KA C + +K GA L ++
Sbjct: 344 AQACGVTYVTVDNPLEMEKISRLMPSAHAIIRIKT-NDSKAQC--SFSTKFGAPLEDVEG 400
Query: 82 LLEAALASQLGVVGISFHIGSGATDFGAFDGAISAAKAVFDAA 124
LLEAA + V G+SFH+GSG D A+ A+ A VF A
Sbjct: 401 LLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAVRDAYQVFQQA 443
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 184 STVFGPTLDAYDKLFTGHP--ELQVGNWLVFSQIGACTAVYGSGFKGFNT 231
+T+FGPT D+ D + P E+++G+WL+ +G+ T F GF T
Sbjct: 627 TTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGFAT 676
>sp|P41931|DCOR_CAEEL Ornithine decarboxylase OS=Caenorhabditis elegans GN=odc-1 PE=3
SV=2
Length = 422
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 6 GVSGKSVSLTVALRNENGLAEALGSN-----FDYASQAEIKGKWHPRCDLLIRIKALDDC 60
GVS + + + + +A A+ + FD + K HP ++++RI A+ D
Sbjct: 104 GVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILRI-AVSDP 162
Query: 61 KAVCPQAQDSKCGAN-LAEIGALLEAALASQLGVVGISFHIGSGATDFGAFDGAISAAK 118
A CP + K GA+ + LL+ A + VVGISFH+GSG D A+ A+ AK
Sbjct: 163 TATCPL--NLKFGADPIIAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNALQHAK 219
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 182 YNSTVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFN 230
+ ST++GPT D+ D + P++ VG WL + +GA T + F GF+
Sbjct: 350 FMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFNGFS 400
>sp|P40807|DCOR1_DROME Ornithine decarboxylase 1 OS=Drosophila melanogaster GN=Odc1 PE=1
SV=3
Length = 394
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 45 HPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGA 104
+P +L++R K+ + +A CP C A++ + AL+ A + +L V G SFH+GSG
Sbjct: 139 YPNSNLIVRFKS-EAKEAQCPLGDKFGCDADV-DAAALMLLAKSLELKVTGTSFHVGSGC 196
Query: 105 TDFGAFDGAISAAKAVF 121
++ A+D AI AK +F
Sbjct: 197 SELQAYDRAIKKAKNLF 213
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 184 STVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFNTADIPTCL 238
S ++GP+ DA DK+ P L G+ L F +GA T S F GF ++P L
Sbjct: 336 SLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGF---EVPKTL 389
>sp|O14977|AZIN1_HUMAN Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1 SV=2
Length = 448
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 90/262 (34%), Gaps = 76/262 (29%)
Query: 45 HPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGA 104
HP +L+ I D+ + + K G L LLE A + ++G+ FH+ S
Sbjct: 146 HPNAKVLLHIATEDNIGG---EEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSAC 202
Query: 105 TDFGAFDGAISAAKAVFDAASARHGLTDQM---------------RAKHWRRGRADCHF- 148
+ + A+S A+ VFD A G T M H D +F
Sbjct: 203 KESQVYVHALSDARCVFDMA-GEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFP 261
Query: 149 ---------GAGPFPRDSAFTLATRNCRESSACSNRTCTGM------------------- 180
G + SAFTLA + +++ +G+
Sbjct: 262 EGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVY 321
Query: 181 --------------------------IYNSTVFGPTLDAYDKLFTG--HPELQVGNWLVF 212
++ S+++GP+ D D++ PEL VG+WL+F
Sbjct: 322 GSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIF 381
Query: 213 SQIGACTAVYGSGFKGFNTADI 234
+GA + S F F I
Sbjct: 382 DNMGADSFHEPSAFNDFQRPAI 403
>sp|Q5R7K3|AZIN1_PONAB Antizyme inhibitor 1 OS=Pongo abelii GN=AZIN1 PE=2 SV=1
Length = 448
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 90/262 (34%), Gaps = 76/262 (29%)
Query: 45 HPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGA 104
HP +L+ I D+ + + K G L LLE A + ++G+ FH+ S
Sbjct: 146 HPNAKVLLHIATEDNIGG---EEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSAC 202
Query: 105 TDFGAFDGAISAAKAVFDAASARHGLTDQM---------------RAKHWRRGRADCHF- 148
+ + A+S A+ VFD A G T M H D +F
Sbjct: 203 KESQVYVHALSDARCVFDMA-GEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFP 261
Query: 149 ---------GAGPFPRDSAFTLATRNCRESSACSNRTCTGM------------------- 180
G + SAFTLA + +++ +G+
Sbjct: 262 EGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVY 321
Query: 181 --------------------------IYNSTVFGPTLDAYDKLFTG--HPELQVGNWLVF 212
++ S+++GP+ D D++ PEL VG+WL+F
Sbjct: 322 GSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIF 381
Query: 213 SQIGACTAVYGSGFKGFNTADI 234
+GA + S F F I
Sbjct: 382 DNMGADSFHEPSAFNDFQRPAI 403
>sp|P40808|DCOR2_DROME Ornithine decarboxylase 2 OS=Drosophila melanogaster GN=Odc2 PE=1
SV=2
Length = 393
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 94/252 (37%), Gaps = 63/252 (25%)
Query: 43 KWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGS 102
K +P +L++R K+ + KA+CP C A +L A A L V G SFH+GS
Sbjct: 137 KHYPDSNLIVRFKS-EAKKALCPLGDKYGCDAEADAAALML-LAKALGLKVTGTSFHVGS 194
Query: 103 GATDFGAFDGAISAAKAVF-------------DAASARHGLTDQMRAK-----------H 138
G ++ A+D AI A+ +F D G+ D+M +
Sbjct: 195 GCSEVEAYDRAIEKAENIFKVGEMIGHKMELLDVGGGFPGIDDEMFEEIAQSVNTSVELR 254
Query: 139 WRRGRADCHFGAGPFPRDSAFTL-----ATRNCRESSACSNRTC-----------TGMIY 182
+ R G F ++A+TL A R R + GM Y
Sbjct: 255 FPDKRIRIISEPGRFFVEAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFY 314
Query: 183 --------------------NSTVFGPTLDAYDKLFT-GHPELQVGNWLVFSQIGACTAV 221
S ++GP+ DA DK+ P L G+ L F +GA T
Sbjct: 315 YPEEVAPELYLDEAESLPKLKSVIWGPSCDAMDKISDLLLPNLNPGDLLGFRNMGAYTMP 374
Query: 222 YGSGFKGFNTAD 233
S F GF+ +
Sbjct: 375 IASPFNGFDVPE 386
>sp|Q96A70|ADC_HUMAN Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2 SV=1
Length = 460
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 31 NFDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQ 90
+FD + K HP +++ I A DD ++ K G +L LLE A
Sbjct: 133 SFDNEMELAKVVKSHPSAKMVLCI-ATDDSHSL--SCLSLKFGVSLKSCRHLLENAKKHH 189
Query: 91 LGVVGISFHIGSGATDFGAFDGAISAAKAVFDAAS 125
+ VVG+SFHIGSG D A+ +I+ A+ VF+ +
Sbjct: 190 VEVVGVSFHIGSGCPDPQAYAQSIADARLVFEMGT 224
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 181 IYNSTVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFNTADI 234
+Y+S+++GP +D D + G P+L VG+WLVF +GA T GS F G I
Sbjct: 351 LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQACHI 406
>sp|Q8BVM4|ADC_MOUSE Antizyme inhibitor 2 OS=Mus musculus GN=Adc PE=2 SV=1
Length = 459
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 62 AVCPQAQDS--------KCGANLAEIGALLEAALASQLGVVGISFHIGSGATDFGAFDGA 113
+C QDS + GA+L LLE A S + VVG+SFHIGSG D A+ +
Sbjct: 153 VLCIATQDSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQS 212
Query: 114 ISAAKAVFD 122
I+ A+ VF
Sbjct: 213 IADARLVFQ 221
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 181 IYNSTVFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTA 220
+Y+S+++GP ++ D + G P+LQVG+WLVF +GA T
Sbjct: 350 LYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYTV 391
>sp|P49725|DCOR_PANRE Ornithine decarboxylase OS=Panagrellus redivivus GN=ODC PE=2 SV=1
Length = 435
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 186 VFGPTLDAYDKLFTGH--PELQVGNWLVFSQIGACTAVYGSGFKGFN 230
V+GPT D D++ P L G+WL + +GA T+V S F GF+
Sbjct: 363 VWGPTCDGLDQVEESSVMPRLYEGDWLYYPDMGAYTSVAASTFNGFD 409
Score = 38.1 bits (87), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 25 AEALG---SNFDYASQAEIKGKWHPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGA 81
AEA G FD + + H L++RI ++ D A C C
Sbjct: 129 AEAAGVKRMTFDSVEELTKIKQNHADPSLILRI-SVSDPTAQCQLGIKFGCDPETVA-PK 186
Query: 82 LLEAALASQLGVVGISFHIGSGATDFGAFDGAISAAKAVFD 122
LL A + V+GISFH+GSG + F A+ A+ +FD
Sbjct: 187 LLRKAADMGMNVIGISFHVGSGCNEPATFRTALEYARGLFD 227
>sp|O67262|DCDA_AQUAE Diaminopimelate decarboxylase OS=Aquifex aeolicus (strain VF5)
GN=lysA PE=1 SV=1
Length = 420
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 39 EIKGKWHPRCDLLIRIKALDDCKA---VCPQAQDSKCGANLAEIGALLE-AALASQLGVV 94
EI GK + + IR+ D K + Q SK G ++ E E A+ L +V
Sbjct: 140 EIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLENLEIV 199
Query: 95 GISFHIGSGATDFGAFDGAISAAKAVFDAASAR 127
GI HIGS D + A+ +++++ + +
Sbjct: 200 GIHCHIGSQILDISPYREAVEKVVSLYESLTQK 232
>sp|Q92445|DCOR_PARBR Ornithine decarboxylase (Fragment) OS=Paracoccidioides brasiliensis
GN=ODC PE=3 SV=1
Length = 79
Score = 35.4 bits (80), Expect = 0.41, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 95 GISFHIGSGATDFGAFDGAISAAKAVFDAAS 125
G+SFH+GSGA D +F A+ ++ VFD A+
Sbjct: 1 GVSFHVGSGAEDPKSFVKAVEDSRFVFDQAA 31
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 19/167 (11%)
Query: 45 HPRCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALASQLGVVGISFHIGSGA 104
HP L + ++ L D +V P + + + +L + + G FH+
Sbjct: 106 HPIRSLELYVRMLRD--SVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT 163
Query: 105 T--DFGAFDGAISAAKAVFDAASARHGLTDQMRAKHWRRGRADCHFGAGPFPRDSAFTLA 162
T DF + G I A+ VFD R + +RR DSA +LA
Sbjct: 164 TLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR----------VLDMDSANSLA 213
Query: 163 TRNCRESSACSNRTCTGMIYNSTVFGPTLDAYDKLFTGHPELQVGNW 209
+ ++ A SN C + N + L+ + LF P + +W
Sbjct: 214 NQMSEKNEATSN--C---LINGYMGLGNLEQAESLFNQMPVKDIISW 255
>sp|Q8A800|DCDA_BACTN Diaminopimelate decarboxylase OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=lysA PE=3 SV=1
Length = 386
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 69 DSKCGANLAEIGALLEAALASQ-LGVVGISFHIGSGATDFGAFDGAISAAKAVFDAASAR 127
++K G ++ ++ +++ AL + + +G+ FHIGS D G F + + D AR
Sbjct: 157 ENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIGSQILDMGDFIALCNRVNELQDKLEAR 216
Query: 128 HGLTDQM 134
L + +
Sbjct: 217 RILVEHI 223
>sp|A4STH4|NORV_AERS4 Anaerobic nitric oxide reductase flavorubredoxin OS=Aeromonas
salmonicida (strain A449) GN=norV PE=3 SV=1
Length = 521
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 40 IKGKWHP----------RCDLLIRIKALDDCKAVCPQAQDSKCGANLAEIGALLEAALAS 89
+K KW P L R AL +A CP S A + E G ++E ++ +
Sbjct: 371 LKAKWRPDGSALALCREHGRQLARQWALHPLEAPCPIITTSAAAAPVVEAGVVVEMSVPA 430
Query: 90 QLGVVGISFHIGSGATDFGAFDGA 113
GVV + SGA + G
Sbjct: 431 SAGVVEVGVPAFSGAMELPVSRGV 454
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,674,755
Number of Sequences: 539616
Number of extensions: 3348727
Number of successful extensions: 7251
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7150
Number of HSP's gapped (non-prelim): 85
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)